cola Report for Hierarchical Partitioning - 'PBMC'

Date: 2021-07-22 16:14:07 CEST, cola version: 1.9.4

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Summary

First the variable is renamed to res_rh.

res_rh = rh

The partition hierarchy and all available functions which can be applied to res_rh object.

res_rh
#> A 'HierarchicalPartition' object with 'ATC:skmeans' method.
#>   On a matrix with 3664 rows and 2638 columns.
#>   Performed in total 2250 partitions.
#>   There are 9 groups under the following parameters:
#>     - min_samples: 26
#>     - mean_silhouette_cutoff: 0.9
#>     - min_n_signatures: 40 (signatures are selected based on:)
#>       - fdr_cutoff: 0.05
#>       - group_diff (scaled values): 0.5
#> 
#> Hierarchy of the partition:
#>   0, 2638 cols
#>   |-- 01, 1255 cols, 29 signatures (c)
#>   |-- 02, 672 cols, 227 signatures
#>   |   |-- 021, 368 cols, 131 signatures
#>   |   |   |-- 0211, 156 cols (a)
#>   |   |   `-- 0212, 212 cols (a)
#>   |   `-- 022, 304 cols, 169 signatures
#>   |       |-- 0221, 149 cols (a)
#>   |       `-- 0222, 155 cols (a)
#>   |-- 03, 365 cols, 153 signatures
#>   |   |-- 031, 204 cols (a)
#>   |   `-- 032, 161 cols (a)
#>   `-- 04, 346 cols, 61 signatures
#>       |-- 041, 209 cols (a)
#>       `-- 042, 137 cols (a)
#> Stop reason:
#>   a) Mean silhouette score was too small
#>   c) There were too few signatures.
#> 
#> Following methods can be applied to this 'HierarchicalPartition' object:
#>  [1] "all_leaves"            "all_nodes"             "cola_report"           "collect_classes"      
#>  [5] "colnames"              "compare_signatures"    "dimension_reduction"   "functional_enrichment"
#>  [9] "get_anno_col"          "get_anno"              "get_children_nodes"    "get_classes"          
#> [13] "get_matrix"            "get_signatures"        "is_leaf_node"          "max_depth"            
#> [17] "merge_node"            "ncol"                  "node_info"             "node_level"           
#> [21] "nrow"                  "rownames"              "show"                  "split_node"           
#> [25] "suggest_best_k"        "test_to_known_factors" "top_rows_heatmap"      "top_rows_overlap"     
#> 
#> You can get result for a single node by e.g. object["01"]

The call of hierarchical_partition() was:

#> hierarchical_partition(data = mat, anno = data.frame(Seurat_class = Seurat_class), 
#>     subset = 500, cores = 4)

Dimension of the input matrix:

mat = get_matrix(res_rh)
dim(mat)
#> [1] 3664 2638

All the methods that were tried:

res_rh@param$combination_method
#> [[1]]
#> [1] "ATC"     "skmeans"

Density distribution

The density distribution for each sample is visualized as one column in the following heatmap. The clustering is based on the distance which is the Kolmogorov-Smirnov statistic between two distributions.

library(ComplexHeatmap)
densityHeatmap(mat, top_annotation = HeatmapAnnotation(df = get_anno(res_rh), 
    col = get_anno_col(res_rh)), ylab = "value", cluster_columns = TRUE, show_column_names = FALSE,
    mc.cores = 1)

plot of chunk density-heatmap

Some values about the hierarchy:

all_nodes(res_rh)
#>  [1] "0"    "01"   "02"   "021"  "0211" "0212" "022"  "0221" "0222" "03"   "031"  "032"  "04"  
#> [14] "041"  "042"
all_leaves(res_rh)
#> [1] "01"   "0211" "0212" "0221" "0222" "031"  "032"  "041"  "042"
node_info(res_rh)
#>      id best_method depth best_k n_columns n_signatures p_signatures is_leaf
#> 1     0 ATC:skmeans     1      4      2638          807      0.22025   FALSE
#> 2    01 ATC:skmeans     2      2      1255           29      0.00791    TRUE
#> 3    02 ATC:skmeans     2      2       672          227      0.06195   FALSE
#> 4   021 ATC:skmeans     3      2       368          131      0.03575   FALSE
#> 5  0211 ATC:skmeans     4      2       156           NA           NA    TRUE
#> 6  0212 ATC:skmeans     4      2       212           NA           NA    TRUE
#> 7   022 ATC:skmeans     3      2       304          169      0.04612   FALSE
#> 8  0221 ATC:skmeans     4      2       149           NA           NA    TRUE
#> 9  0222 ATC:skmeans     4      3       155           NA           NA    TRUE
#> 10   03 ATC:skmeans     2      2       365          153      0.04176   FALSE
#> 11  031 ATC:skmeans     3      2       204           NA           NA    TRUE
#> 12  032 ATC:skmeans     3      2       161           NA           NA    TRUE
#> 13   04 ATC:skmeans     2      2       346           61      0.01665   FALSE
#> 14  041 ATC:skmeans     3      2       209           NA           NA    TRUE
#> 15  042 ATC:skmeans     3      2       137           NA           NA    TRUE

In the output from node_info(), there are the following columns:

Labels of nodes are encoded in a special way. The number of digits correspond to the depth of the node in the hierarchy and the value of the digits correspond to the index of the subgroup in the current node, E.g. a label of “012” means the node is the second subgroup of the partition which is the first subgroup of the root node.

Suggest the best k

Following table shows the best k (number of partitions) for each node in the partition hierarchy. Clicking on the node name in the table goes to the corresponding section for the partitioning on that node.

The cola vignette explains the definition of the metrics used for determining the best number of partitions.

suggest_best_k(res_rh)
Node Best method Is leaf Best k 1-PAC Mean silhouette Concordance #samples
Node0 ATC:skmeans 4 1.00 0.97 0.99 2638 **
Node01-leaf ATC:skmeans ✓ (c) 2 0.88 0.93 0.97 1255
Node02 ATC:skmeans 3 0.94 0.93 0.97 672 *
Node021 ATC:skmeans 2 0.88 0.92 0.97 368
Node0211-leaf ATC:skmeans ✓ (a) 2 0.76 0.87 0.95 156
Node0212-leaf ATC:skmeans ✓ (a) 2 0.72 0.89 0.95 212
Node022 ATC:skmeans 2 1.00 0.98 0.99 304 **
Node0221-leaf ATC:skmeans ✓ (a) 2 0.83 0.89 0.95 149
Node0222-leaf ATC:skmeans ✓ (a) 3 0.85 0.90 0.96 155
Node03 ATC:skmeans 3 0.96 0.93 0.97 365 **
Node031-leaf ATC:skmeans ✓ (a) 2 0.81 0.90 0.96 204
Node032-leaf ATC:skmeans ✓ (a) 3 0.56 0.76 0.89 161
Node04 ATC:skmeans 2 0.85 0.91 0.96 346
Node041-leaf ATC:skmeans ✓ (a) 2 0.55 0.81 0.92 209
Node042-leaf ATC:skmeans ✓ (a) 2 0.74 0.87 0.95 137

Stop reason: a) Mean silhouette score was too small c) There were too few signatures.

**: 1-PAC > 0.95, *: 1-PAC > 0.9

Partition hierarchy

The nodes of the hierarchy can be merged by setting the merge_node parameters. Here we control the hierarchy with the min_n_signatures parameter. The value of min_n_signatures is from node_info().

collect_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 61))
#> Error in dimnames(x) <- dn: length of 'dimnames' [2] not equal to array extent
collect_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 131))
#> Error in dimnames(x) <- dn: length of 'dimnames' [2] not equal to array extent
collect_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 153))
#> Error in dimnames(x) <- dn: length of 'dimnames' [2] not equal to array extent
collect_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 169))
#> Error in dimnames(x) <- dn: length of 'dimnames' [2] not equal to array extent
collect_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 227))
#> Error in dimnames(x) <- dn: length of 'dimnames' [2] not equal to array extent
collect_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 807))
#> Error in dimnames(x) <- dn: length of 'dimnames' [2] not equal to array extent

Following shows the table of the partitions (You need to click the show/hide code output link to see it).

show/hide code output

get_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 61))
#> AAACATACAACCAC-1 AAACATTGAGCTAC-1 AAACATTGATCAGC-1 AAACCGTGCTTCCG-1 AAACCGTGTATGCG-1 
#>             "01"            "042"             "01"           "0222"            "032" 
#> AAACGCACTGGTAC-1 AAACGCTGACCAGT-1 AAACGCTGGTTCTT-1 AAACGCTGTAGCCA-1 AAACGCTGTTTCTG-1 
#>             "01"             "01"             "01"            "031"           "0211" 
#> AAACTTGAAAAACG-1 AAACTTGATCCAGA-1 AAAGAGACGAGATA-1 AAAGAGACGCGAGA-1 AAAGAGACGGACTT-1 
#>            "042"             "01"             "01"           "0212"             "01" 
#> AAAGAGACGGCATT-1 AAAGCAGATATCGG-1 AAAGCCTGTATGCG-1 AAAGGCCTGTCTAG-1 AAAGTTTGATCACG-1 
#>             "01"           "0222"             "01"            "042"            "041" 
#> AAAGTTTGGGGTGA-1 AAAGTTTGTAGAGA-1 AAAGTTTGTAGCGT-1 AAATCAACAATGCC-1 AAATCAACACCAGT-1 
#>            "042"             "01"           "0212"            "042"             "01" 
#> AAATCAACCAGGAG-1 AAATCAACCCTATT-1 AAATCAACGGAAGC-1 AAATCAACTCGCAA-1 AAATCATGACCACA-1 
#>             "01"           "0222"             "01"             "01"           "0221" 
#> AAATCCCTCCACAA-1 AAATCCCTGCTATG-1 AAATGTTGAACGAA-1 AAATGTTGCCACAA-1 AAATGTTGTGGCAT-1 
#>             "01"            "041"           "0212"            "031"           "0222" 
#> AAATTCGAAGGTTC-1 AAATTCGAATCACG-1 AAATTCGAGCTGAT-1 AAATTCGAGGAGTG-1 AAATTCGATTCTCA-1 
#>             "01"           "0212"           "0221"             "01"            "031" 
#> AAATTGACACGACT-1 AAATTGACTCGCTC-1 AACAAACTCATTTC-1 AACAAACTTTCGTT-1 AACAATACGACGAG-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> AACACGTGCAGAGG-1 AACACGTGGAAAGT-1 AACACGTGGAACCT-1 AACACGTGGCTACA-1 AACACGTGTACGAC-1 
#>             "01"             "01"           "0212"             "01"           "0221" 
#> AACAGCACAAGAGT-1 AACATTGATGGGAG-1 AACCAGTGATACCG-1 AACCCAGATCGCTC-1 AACCGATGCTCCCA-1 
#>           "0211"           "0221"           "0221"             "01"             "01" 
#> AACCGATGGTCATG-1 AACCGATGTTCTAC-1 AACCGCCTAGCGTT-1 AACCGCCTCTACGA-1 AACCTACTGTGAGG-1 
#>            "042"           "0212"             "01"           "0222"           "0222" 
#> AACCTACTGTGTTG-1 AACCTTACGAGACG-1 AACCTTACGCGAGA-1 AACCTTACTAACGC-1 AACCTTTGGACGGA-1 
#>             "01"             "01"            "032"           "0221"             "01" 
#> AACCTTTGTACGCA-1 AACGCAACAAGTAG-1 AACGCATGACCCAA-1 AACGCATGCCTTCG-1 AACGCATGTACTTC-1 
#>           "0221"             "01"             "01"             "01"             "01" 
#> AACGCCCTCGGGAA-1 AACGCCCTCGTACA-1 AACGCCCTGGCATT-1 AACGTCGAGTATCG-1 AACGTGTGAAAGCA-1 
#>             "01"            "032"            "031"            "032"             "01" 
#> AACGTGTGGCGGAA-1 AACGTGTGTCCAAG-1 AACGTGTGTGCTTT-1 AACTACCTTAGAGA-1 AACTCACTCAAGCT-1 
#>            "041"             "01"             "01"             "01"           "0212" 
#> AACTCACTTGGAGG-1 AACTCGGAAAGTGA-1 AACTCGGAAGGTCT-1 AACTCTTGCAGGAG-1 AACTGTCTCCCTTG-1 
#>           "0212"            "031"           "0211"             "01"           "0212" 
#> AACTTGCTACGCTA-1 AACTTGCTGGGACA-1 AAGAACGAGTGTTG-1 AAGAAGACGTAGGG-1 AAGACAGAAGTCTG-1 
#>            "042"             "01"             "01"            "041"            "041" 
#> AAGACAGAGGATCT-1 AAGACAGATTACCT-1 AAGAGATGGGTAGG-1 AAGATGGAAAACAG-1 AAGATGGAGAACTC-1 
#>             "01"           "0212"            "041"            "041"           "0222" 
#> AAGATGGAGATAAG-1 AAGATTACAACCTG-1 AAGATTACAGATCC-1 AAGATTACCCGTTC-1 AAGATTACCGCCTT-1 
#>           "0222"             "01"           "0222"           "0212"           "0212" 
#> AAGATTACCTCAAG-1 AAGATTACTCCTCG-1 AAGCAAGAGCGAGA-1 AAGCAAGAGCTTAG-1 AAGCAAGAGGTGTT-1 
#>            "032"           "0211"             "01"            "031"            "032" 
#> AAGCACTGAGCAAA-1 AAGCACTGCATACG-1 AAGCACTGGTTCTT-1 AAGCCAACGTGTTG-1 AAGCCATGAACTGC-1 
#>            "042"             "01"            "042"             "01"           "0222" 
#> AAGCCATGACACGT-1 AAGCCATGCGTGAT-1 AAGCCATGTCTCGC-1 AAGCCTGACATGCA-1 AAGCCTGACCGAAT-1 
#>           "0211"             "01"             "01"             "01"           "0211" 
#> AAGCGACTCCTCAC-1 AAGCGACTGTGTCA-1 AAGCGACTTACAGC-1 AAGCGACTTTGACG-1 AAGCGTACGTCTTT-1 
#>           "0222"             "01"            "041"           "0221"             "01" 
#> AAGGCTTGCGAACT-1 AAGGTCACGGTTAC-1 AAGGTCACTGTTTC-1 AAGGTCACTTCCCG-1 AAGGTCTGACAGTC-1 
#>            "031"           "0211"            "041"             "01"             "01" 
#> AAGGTCTGCAGATC-1 AAGTAACTCTGAAC-1 AAGTAACTGAGATA-1 AAGTAGGATACAGC-1 AAGTATACCGAACT-1 
#>             "01"           "0212"            "041"            "032"             "01" 
#> AAGTCCGACTTGTT-1 AAGTCCGATAGAAG-1 AAGTCTCTAGTCGT-1 AAGTCTCTCGGAGA-1 AAGTGGCTTGGAGG-1 
#>             "01"             "01"             "01"            "031"            "041" 
#> AAGTTCCTCATTCT-1 AAGTTCCTTCTTAC-1 AATAAGCTCGAATC-1 AATAAGCTCGTTGA-1 AATACCCTGGACGA-1 
#>           "0221"             "01"             "01"             "01"            "041" 
#> AATACCCTGGCATT-1 AATACTGAAAGGGC-1 AATACTGAATTGGC-1 AATAGGGAACCCTC-1 AATAGGGAGAATGA-1 
#>             "01"            "031"            "032"            "042"            "031" 
#> AATCAAACTATCGG-1 AATCCGGAATGCTG-1 AATCCTACCGGTAT-1 AATCCTTGACGGGA-1 AATCCTTGGTGAGG-1 
#>             "01"            "042"             "01"           "0212"            "032" 
#> AATCGGTGGAACTC-1 AATCGGTGTGCTTT-1 AATCTAGAAAAGTG-1 AATCTAGAATCGGT-1 AATCTCACAGCCTA-1 
#>            "031"             "01"             "01"             "01"           "0222" 
#> AATCTCACTCTAGG-1 AATCTCTGAACAGA-1 AATCTCTGCTTTAC-1 AATGATACACCAAC-1 AATGATACGGTCAT-1 
#>             "01"             "01"            "032"            "031"           "0222" 
#> AATGCGTGACACCA-1 AATGCGTGGACGGA-1 AATGCGTGGCTATG-1 AATGGAGAATCGTG-1 AATGGAGATCCTTA-1 
#>            "042"           "0212"            "042"           "0212"             "01" 
#> AATGGCTGACACCA-1 AATGGCTGCGTGAT-1 AATGGCTGTAAAGG-1 AATGGCTGTACTCT-1 AATGGCTGTGAAGA-1 
#>            "042"             "01"            "031"            "031"             "01" 
#> AATGTAACGGTGGA-1 AATGTCCTCTTCTA-1 AATGTTGACAGTCA-1 AATGTTGAGTTGAC-1 AATGTTGATCTACT-1 
#>             "01"             "01"             "01"           "0212"             "01" 
#> AATTACGAATTCCT-1 AATTACGACTTCTA-1 AATTACGAGTGAGG-1 AATTACGATTGGCA-1 AATTCCTGCTCAGA-1 
#>           "0222"             "01"             "01"            "041"            "042" 
#> AATTGATGTCGCAA-1 AATTGTGACTTGGA-1 ACAAAGGAGGGTGA-1 ACAAATTGATTCTC-1 ACAAATTGCTCAGA-1 
#>           "0221"            "041"             "01"           "0221"           "0211" 
#> ACAAATTGTTGCGA-1 ACAACCGAGGGATG-1 ACAACCGAGTTACG-1 ACAAGAGAAGTCGT-1 ACAAGAGACTTATC-1 
#>            "032"            "031"             "01"           "0222"             "01" 
#> ACAAGAGAGTTGAC-1 ACAATCCTAACCGT-1 ACAATCCTTAGCGT-1 ACAATTGACTGACA-1 ACAATTGATGACTG-1 
#>            "041"             "01"            "042"            "031"            "032" 
#> ACACAGACCATACG-1 ACACCAGAGGGCAA-1 ACACCCTGGTGTTG-1 ACACGAACAGTTCG-1 ACACGATGACGCAT-1 
#>            "031"             "01"            "032"             "01"            "031" 
#> ACACGATGATGTGC-1 ACACGATGTCGTAG-1 ACACGATGTGGTCA-1 ACAGACACGGCATT-1 ACAGACACGTTGTG-1 
#>           "0212"             "01"             "01"            "031"             "01" 
#> ACAGCAACACCTAG-1 ACAGCAACCTCAAG-1 ACAGGTACCCCACT-1 ACAGGTACGCTGTA-1 ACAGGTACTGGTGT-1 
#>           "0211"           "0221"             "01"             "01"            "032" 
#> ACAGTCGACCCAAA-1 ACAGTCGACCGATA-1 ACAGTGACTCACCC-1 ACAGTGACTCTATC-1 ACAGTGTGGTCACA-1 
#>             "01"            "031"             "01"             "01"             "01" 
#> ACAGTGTGTTGCGA-1 ACATCACTCTACTT-1 ACATGGTGAAGCCT-1 ACATGGTGCAACCA-1 ACATGGTGCGAGTT-1 
#>           "0212"           "0212"             "01"            "042"             "01" 
#> ACATTCTGGCATAC-1 ACATTCTGGGAACG-1 ACCAACGACATGCA-1 ACCACAGAAAGTAG-1 ACCACAGAGTTGGT-1 
#>             "01"           "0212"             "01"             "01"             "01" 
#> ACCACCTGTGTGCA-1 ACCACGCTACAGCT-1 ACCACGCTACCCAA-1 ACCACGCTGCGAGA-1 ACCACGCTGCTGTA-1 
#>             "01"             "01"            "031"             "01"             "01" 
#> ACCAGCCTGACAGG-1 ACCAGTGAACGGTT-1 ACCAGTGAATACCG-1 ACCAGTGAGGGATG-1 ACCAGTGATGACTG-1 
#>             "01"            "041"           "0221"             "01"           "0211" 
#> ACCATTACCTTCTA-1 ACCATTACGAGATA-1 ACCATTTGTCATTC-1 ACCCAAGAACTGTG-1 ACCCAAGAATTCCT-1 
#>             "01"            "031"             "01"            "031"           "0221" 
#> ACCCAAGAGGACAG-1 ACCCAAGATTCACT-1 ACCCACTGCGCCTT-1 ACCCACTGGACAGG-1 ACCCACTGGTTCAG-1 
#>             "01"            "041"           "0211"             "01"            "032" 
#> ACCCACTGTCGTAG-1 ACCCAGCTCAGAAA-1 ACCCAGCTGTTAGC-1 ACCCAGCTTGCTTT-1 ACCCGTTGATGACC-1 
#>           "0222"             "01"           "0212"             "01"            "041" 
#> ACCCGTTGCTGCAA-1 ACCCGTTGCTTCTA-1 ACCCTCGACCTATT-1 ACCCTCGACGGTAT-1 ACCCTCGATAAGGA-1 
#>             "01"             "01"            "031"            "041"           "0222" 
#> ACCCTCGATCAAGC-1 ACCGTGCTACCAGT-1 ACCGTGCTGGAACG-1 ACCTATTGCTGAGT-1 ACCTATTGTGCCCT-1 
#>           "0211"             "01"            "042"            "041"           "0221" 
#> ACCTCCGAGTCCTC-1 ACCTCCGATATGCG-1 ACCTCCGATGCTGA-1 ACCTCGTGAACCAC-1 ACCTGAGATATCGG-1 
#>             "01"             "01"             "01"             "01"           "0211" 
#> ACCTGGCTAAGTAG-1 ACCTTTGACTCCCA-1 ACCTTTGAGGAACG-1 ACCTTTGAGGAAGC-1 ACGAACACCTTGTT-1 
#>            "032"           "0222"           "0222"           "0222"            "032" 
#> ACGAACTGGCTATG-1 ACGAAGCTCTCCAC-1 ACGAAGCTCTGAGT-1 ACGACCCTATCTCT-1 ACGACCCTGATGAA-1 
#>           "0221"             "01"            "042"           "0222"             "01" 
#> ACGACCCTTGACAC-1 ACGACCCTTGACCA-1 ACGAGGGACAGGAG-1 ACGAGGGACGAACT-1 ACGAGGGATGTAGC-1 
#>            "042"             "01"           "0222"             "01"             "01" 
#> ACGAGTACCCTAAG-1 ACGAGTACGAATCC-1 ACGATCGAGGACTT-1 ACGATCGAGTCACA-1 ACGATGACAATGCC-1 
#>            "041"            "042"            "031"           "0212"             "01" 
#> ACGATGACTGGTCA-1 ACGATTCTACGGGA-1 ACGCAATGGTTCAG-1 ACGCACCTGTTAGC-1 ACGCCACTGAACTC-1 
#>             "01"            "031"            "032"            "041"           "0211" 
#> ACGCCGGAAACCAC-1 ACGCCGGAAAGCCT-1 ACGCCGGAAATGCC-1 ACGCCTTGCTCCCA-1 ACGCGGTGGCGAGA-1 
#>           "0212"             "01"             "01"           "0221"             "01" 
#> ACGCGGTGTGTGGT-1 ACGCGGTGTTTGCT-1 ACGCTCACAGTACC-1 ACGCTCACCCTTGC-1 ACGCTGCTGTTCTT-1 
#>            "042"            "031"             "01"             "01"            "032" 
#> ACGGAACTCAGATC-1 ACGGAACTGTCGTA-1 ACGGAGGACTCTTA-1 ACGGATTGGGAGGT-1 ACGGATTGGTTAGC-1 
#>            "032"           "0221"           "0212"            "041"             "01" 
#> ACGGCTCTGAGCAG-1 ACGGCTCTTGCACA-1 ACGGTAACCGCTAA-1 ACGGTAACCTTCGC-1 ACGGTAACGGTGGA-1 
#>             "01"             "01"            "031"            "031"             "01" 
#> ACGGTAACTCGCAA-1 ACGGTATGAGTCGT-1 ACGGTATGGGTATC-1 ACGGTATGGTTGTG-1 ACGGTCCTAACGGG-1 
#>             "01"           "0212"            "042"            "041"             "01" 
#> ACGGTCCTCGGGAA-1 ACGTAGACAACCAC-1 ACGTAGACTACAGC-1 ACGTCAGAAACGAA-1 ACGTCAGAGAGCTT-1 
#>             "01"             "01"            "041"             "01"           "0211" 
#> ACGTCAGAGGGATG-1 ACGTCCTGATAAGG-1 ACGTCCTGTGAACC-1 ACGTCGCTCCTGAA-1 ACGTCGCTCTATTC-1 
#>             "01"           "0212"           "0222"            "032"           "0212" 
#> ACGTCGCTTCTCAT-1 ACGTGATGCCATGA-1 ACGTGATGGGTCTA-1 ACGTGATGTAACCG-1 ACGTGATGTGACAC-1 
#>            "041"           "0222"             "01"           "0221"            "032" 
#> ACGTGCCTCCGTAA-1 ACGTGCCTTCTATC-1 ACGTTACTTTCCAT-1 ACGTTGGAAAAGCA-1 ACGTTGGAAACCTG-1 
#>             "01"            "031"             "01"             "01"            "031" 
#> ACGTTGGACCGTAA-1 ACGTTGGAGCCAAT-1 ACGTTGGATATGGC-1 ACGTTGGATCAGGT-1 ACGTTTACATCAGC-1 
#>           "0211"            "032"            "041"           "0222"             "01" 
#> ACTAAAACCCACAA-1 ACTAAAACTCGACA-1 ACTACGGAATTTCC-1 ACTACGGACCTATT-1 ACTACGGATCGCTC-1 
#>             "01"           "0212"             "01"             "01"             "01" 
#> ACTACTACTAAGGA-1 ACTAGGTGGAACCT-1 ACTAGGTGGAACTC-1 ACTATCACCTTGGA-1 ACTATCACTGCCAA-1 
#>             "01"             "01"             "01"            "031"             "01" 
#> ACTCAGGACTGAAC-1 ACTCAGGATCTATC-1 ACTCAGGATTCGTT-1 ACTCCTCTCAACTG-1 ACTCGCACGAAAGT-1 
#>             "01"            "042"           "0211"             "01"           "0212" 
#> ACTCGCACTACGAC-1 ACTCTCCTGACACT-1 ACTCTCCTGCATAC-1 ACTCTCCTGTTTGG-1 ACTGAGACAACCAC-1 
#>           "0212"             "01"            "042"             "01"            "031" 
#> ACTGAGACCCATAG-1 ACTGAGACGTTGGT-1 ACTGCCACACACGT-1 ACTGCCACTCCGTC-1 ACTGGCCTTCAGTG-1 
#>           "0221"            "042"            "031"            "032"            "032" 
#> ACTGTGGACGTGTA-1 ACTGTGGATCTAGG-1 ACTGTTACCCACAA-1 ACTGTTACTGCAGT-1 ACTTAAGAACCACA-1 
#>            "031"            "042"           "0211"             "01"             "01" 
#> ACTTAAGATTACTC-1 ACTTAGCTGCGTAT-1 ACTTAGCTGGGAGT-1 ACTTCAACAAGCAA-1 ACTTCAACGTAGGG-1 
#>           "0212"           "0221"             "01"            "031"            "032" 
#> ACTTCCCTTTCCGC-1 ACTTCTGACATGCA-1 ACTTGACTCCACAA-1 ACTTGGGAGAAAGT-1 ACTTGGGAGGTTTG-1 
#>             "01"            "041"            "042"           "0212"             "01" 
#> ACTTGGGATGTGAC-1 ACTTGGGATTGACG-1 ACTTGTACCTGTCC-1 ACTTTGTGGAAAGT-1 ACTTTGTGGATAGA-1 
#>           "0211"           "0222"             "01"             "01"           "0222" 
#> AGAAACGAAAGTAG-1 AGAAAGTGCGCAAT-1 AGAAAGTGGGGATG-1 AGAACAGAAATGCC-1 AGAACAGACGACTA-1 
#>            "041"             "01"           "0212"            "032"            "041" 
#> AGAACAGAGACAAA-1 AGAACGCTTTGCTT-1 AGAAGATGTGACTG-1 AGAATGGAAGAAGT-1 AGAATTTGTAACCG-1 
#>             "01"             "01"             "01"            "031"             "01" 
#> AGAATTTGTAGAGA-1 AGACACACTGTAGC-1 AGACACTGTCAAGC-1 AGACCTGAAGTAGA-1 AGACCTGACCAACA-1 
#>             "01"             "01"           "0212"           "0212"             "01" 
#> AGACCTGAGGAAGC-1 AGACGTACAGAGGC-1 AGACGTACCCCTAC-1 AGACGTACCTCTTA-1 AGACGTACTCGTGA-1 
#>             "01"             "01"            "041"           "0212"           "0221" 
#> AGACTGACCATCAG-1 AGACTGACCCTTTA-1 AGACTTCTCATGCA-1 AGAGATGACAGTCA-1 AGAGATGACTGAAC-1 
#>             "01"             "01"            "041"            "041"             "01" 
#> AGAGATGAGGTTTG-1 AGAGATGATCTCGC-1 AGAGATGATTGTGG-1 AGAGCGGAGGCAAG-1 AGAGTCTGGTCGTA-1 
#>           "0211"            "042"             "01"           "0222"           "0221" 
#> AGAGTGCTCAGCTA-1 AGAGTGCTCGAATC-1 AGAGTGCTGTCATG-1 AGAGTGCTGTCCTC-1 AGAGTGCTGTGTTG-1 
#>             "01"             "01"             "01"             "01"            "041" 
#> AGATATACCCGTAA-1 AGATATACGATGAA-1 AGATATACTGTTCT-1 AGATATTGCCTACC-1 AGATATTGGCCAAT-1 
#>            "032"             "01"            "042"             "01"           "0222" 
#> AGATCGTGTCTGGA-1 AGATCGTGTTTGTC-1 AGATCTCTATCACG-1 AGATTAACGTTCTT-1 AGATTCCTATCGTG-1 
#>           "0212"            "041"            "041"           "0221"             "01" 
#> AGATTCCTCACTTT-1 AGATTCCTGACGAG-1 AGATTCCTGTTCAG-1 AGCAAAGATATGCG-1 AGCACAACAGTCTG-1 
#>           "0212"           "0212"            "032"             "01"             "01" 
#> AGCACTGAGGGAGT-1 AGCACTGATATGCG-1 AGCACTGATGCTTT-1 AGCACTGATTGCGA-1 AGCATCGAAGATCC-1 
#>             "01"             "01"           "0222"             "01"             "01" 
#> AGCATCGAAGGGTG-1 AGCATCGAGCTTCC-1 AGCATCGAGTGAGG-1 AGCATCGATAACCG-1 AGCATGACGATGAA-1 
#>            "042"           "0212"             "01"           "0222"            "031" 
#> AGCCAATGGGGAGT-1 AGCCAATGTATCTC-1 AGCCACCTGGATCT-1 AGCCGGTGCCAATG-1 AGCCGGTGTGTTTC-1 
#>           "0221"             "01"            "031"             "01"             "01" 
#> AGCCGTCTCAATCG-1 AGCCGTCTGAGAGC-1 AGCCTCACGTTCGA-1 AGCCTCACTGTCAG-1 AGCCTCTGCAGTTG-1 
#>             "01"             "01"             "01"           "0222"            "041" 
#> AGCCTCTGCCAATG-1 AGCGAACTGGATCT-1 AGCGAACTTACTGG-1 AGCGATACGGAGCA-1 AGCGATTGAGATCC-1 
#>            "032"             "01"             "01"             "01"            "032" 
#> AGCGCCGAATCTCT-1 AGCGCCGACAGAGG-1 AGCGCTCTACCTTT-1 AGCGGCACCGGGAA-1 AGCGGCTGATGTGC-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> AGCGGGCTTGCCAA-1 AGCGTAACATGCTG-1 AGCGTAACTGAGAA-1 AGCTCGCTACTGGT-1 AGCTCGCTCTGCTC-1 
#>             "01"             "01"           "0222"             "01"             "01" 
#> AGCTGAACCATACG-1 AGCTGAACCTCTCG-1 AGCTGCCTTGGGAG-1 AGCTGCCTTTCATC-1 AGCTGCCTTTCTGT-1 
#>           "0221"             "01"           "0211"             "01"             "01" 
#> AGCTGTGATCCAAG-1 AGCTTTACAAGTAG-1 AGCTTTACACCAAC-1 AGCTTTACTCTCAT-1 AGGAAATGAGGAGC-1 
#>             "01"             "01"             "01"            "042"             "01" 
#> AGGAACCTCTTAGG-1 AGGAACCTTGCCTC-1 AGGAATGATAACGC-1 AGGAATGATTTGTC-1 AGGAGTCTGGTTTG-1 
#>           "0221"            "031"             "01"             "01"             "01" 
#> AGGAGTCTTGTCAG-1 AGGATAGACATTTC-1 AGGATAGAGGATTC-1 AGGATGCTACTAGC-1 AGGATGCTTTAGGC-1 
#>             "01"             "01"            "031"            "041"            "032" 
#> AGGCAACTGAAGGC-1 AGGCAGGAGTACCA-1 AGGCCTCTAGTCGT-1 AGGCCTCTCGGAGA-1 AGGCCTCTCGTAAC-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> AGGGACGACGTTGA-1 AGGGACGAGTCAAC-1 AGGGACGAGTTGTG-1 AGGGACGATAGAGA-1 AGGGACGATGCATG-1 
#>             "01"            "032"             "01"             "01"            "031" 
#> AGGGAGTGAGCCTA-1 AGGGCCACCATACG-1 AGGGCGCTAACCAC-1 AGGGCGCTATGGTC-1 AGGGTGGACAGTCA-1 
#>             "01"             "01"           "0212"            "031"            "042" 
#> AGGGTGGACTCAAG-1 AGGGTGGAGTTGCA-1 AGGGTTTGTTCATC-1 AGGTCATGAGTGTC-1 AGGTCATGCTTATC-1 
#>           "0212"            "031"           "0211"            "041"             "01" 
#> AGGTCTGATTCTCA-1 AGGTGGGAAGAATG-1 AGGTGGGAAGTTCG-1 AGGTGTTGGTTACG-1 AGGTTCGAACCTCC-1 
#>           "0221"             "01"             "01"            "042"           "0211" 
#> AGGTTCGAACGTAC-1 AGGTTCGAGGGTGA-1 AGTAAGGAGTTTGG-1 AGTAAGGATTCTTG-1 AGTAATACATCACG-1 
#>           "0211"             "01"             "01"             "01"            "031" 
#> AGTAATACCGAACT-1 AGTAATTGTCCCAC-1 AGTACGTGAGGGTG-1 AGTACGTGCTGCAA-1 AGTACGTGCTTGGA-1 
#>            "041"             "01"             "01"             "01"             "01" 
#> AGTACTCTACGTGT-1 AGTACTCTCAACCA-1 AGTACTCTCGGTAT-1 AGTAGGCTTGCCTC-1 AGTATAACTTGTCT-1 
#>            "041"            "031"             "01"           "0221"           "0221" 
#> AGTATCCTAGAACA-1 AGTCACGATGAGCT-1 AGTCAGACGAATAG-1 AGTCAGACGCTTAG-1 AGTCAGACTAGAGA-1 
#>             "01"            "031"             "01"             "01"            "031" 
#> AGTCAGACTGCACA-1 AGTCCAGATATCTC-1 AGTCCAGATTTCAC-1 AGTCGAACCAACCA-1 AGTCGCCTCCGTAA-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> AGTCTACTAGGGTG-1 AGTCTACTTGCATG-1 AGTCTTACACCACA-1 AGTCTTACTTCGCC-1 AGTCTTACTTCGGA-1 
#>           "0211"           "0221"             "01"             "01"            "032" 
#> AGTGACTGCAACTG-1 AGTGTTCTAACCTG-1 AGTGTTCTATAAGG-1 AGTGTTCTCACTTT-1 AGTTAAACCACTTT-1 
#>           "0221"             "01"             "01"           "0212"             "01" 
#> AGTTATGAACAGTC-1 AGTTATGACTGAGT-1 AGTTATGAGTTCAG-1 AGTTCTACCAGCTA-1 AGTTCTTGAAGCCT-1 
#>           "0212"             "01"             "01"           "0211"            "031" 
#> AGTTGTCTACTACG-1 AGTTTAGATGGTCA-1 AGTTTCACGGTCTA-1 AGTTTGCTACAGTC-1 AGTTTGCTACTGGT-1 
#>             "01"             "01"            "031"             "01"            "031" 
#> AGTTTGCTCCAAGT-1 ATAAACACAGTGCT-1 ATAAACACCACCAA-1 ATAACAACATGCTG-1 ATAACAACGTCTAG-1 
#>             "01"            "042"             "01"           "0212"             "01" 
#> ATAACAACTTTGTC-1 ATAACATGTACTCT-1 ATAACCCTGTTGGT-1 ATAACCCTTGGTAC-1 ATAAGTACGAATGA-1 
#>             "01"             "01"             "01"             "01"            "041" 
#> ATAAGTTGGTACGT-1 ATAAGTTGTCTAGG-1 ATAATCGAGCTGAT-1 ATAATCGATGGTTG-1 ATAATGACCTACTT-1 
#>           "0211"             "01"            "041"             "01"             "01" 
#> ATAATGACTCGTGA-1 ATACAATGTTAGGC-1 ATACCACTCGTACA-1 ATACCACTCTAAGC-1 ATACCACTGCCAAT-1 
#>           "0211"             "01"           "0212"           "0222"            "031" 
#> ATACCGGAATGCTG-1 ATACCGGACATTTC-1 ATACCGGACTTCGC-1 ATACCGGAGGTGTT-1 ATACCGGATCTCGC-1 
#>           "0222"           "0212"             "01"           "0212"             "01" 
#> ATACCTACGCATCA-1 ATACCTTGGGGCAA-1 ATACGGACAGACTC-1 ATACGGACCTACTT-1 ATACGGACGAGGTG-1 
#>             "01"             "01"           "0211"           "0211"            "041" 
#> ATACGGACTATGCG-1 ATACGGACTCTGGA-1 ATACGTCTTAACGC-1 ATACTCTGCTTCGC-1 ATACTCTGGTATGC-1 
#>            "041"           "0211"           "0211"           "0222"            "032" 
#> ATAGATACCATGGT-1 ATAGATACGACGAG-1 ATAGATTGGTGTAC-1 ATAGCCGAACGGAG-1 ATAGCGTGCAGATC-1 
#>             "01"             "01"            "042"             "01"             "01" 
#> ATAGCGTGCCCTTG-1 ATAGCGTGGTATCG-1 ATAGCGTGTCTCTA-1 ATAGCTCTCTGATG-1 ATAGCTCTGAGGTG-1 
#>           "0212"           "0211"             "01"             "01"             "01" 
#> ATAGGAGAAACAGA-1 ATAGGCTGTCAGAC-1 ATAGTCCTAGTGTC-1 ATAGTCCTTGCATG-1 ATAGTCCTTGTCGA-1 
#>           "0222"             "01"           "0212"             "01"             "01" 
#> ATAGTTGACAACTG-1 ATAGTTGACCCTCA-1 ATAGTTGAGACGTT-1 ATAGTTGATAAGCC-1 ATATACGAAGCCAT-1 
#>             "01"           "0221"             "01"             "01"             "01" 
#> ATATACGAATTGGC-1 ATATAGTGGAATGA-1 ATATGCCTAGATCC-1 ATATGCCTGGACAG-1 ATATGCCTTCTCTA-1 
#>             "01"           "0211"           "0211"             "01"             "01" 
#> ATATGCCTTGGTAC-1 ATCAAATGAGCCTA-1 ATCAAATGGGTAAA-1 ATCAACCTAAACGA-1 ATCAACCTGAGGAC-1 
#>             "01"           "0212"           "0221"             "01"             "01" 
#> ATCAACCTTCTCTA-1 ATCAACCTTTGTCT-1 ATCACACTTTGTCT-1 ATCACGGATTTCGT-1 ATCATCTGACACCA-1 
#>            "031"             "01"             "01"            "042"            "032" 
#> ATCATGCTAGAGTA-1 ATCATGCTGAACCT-1 ATCCAGGACGCTAA-1 ATCCAGGATGGAAA-1 ATCCATACTCCTTA-1 
#>            "031"            "042"           "0221"             "01"           "0212" 
#> ATCCATACTTCATC-1 ATCCCGTGCAGTCA-1 ATCCCGTGCATGCA-1 ATCCCGTGGCTGAT-1 ATCCGCACGCATCA-1 
#>           "0221"            "032"            "041"            "042"            "042" 
#> ATCCTAACGACGGA-1 ATCCTAACGCTACA-1 ATCGACGAAACTGC-1 ATCGACGAATGACC-1 ATCGAGTGGACGTT-1 
#>            "041"            "031"           "0222"             "01"            "031" 
#> ATCGCAGAATCTCT-1 ATCGCAGAGTGTCA-1 ATCGCCACTGAGGG-1 ATCGCCTGGGTCAT-1 ATCGCCTGTGGCAT-1 
#>           "0221"            "042"            "031"             "01"            "041" 
#> ATCGCGCTCAGAGG-1 ATCGCGCTGGGATG-1 ATCGCGCTTTTCGT-1 ATCGGAACCAGTCA-1 ATCGGTGAGTCAAC-1 
#>           "0212"             "01"            "041"             "01"             "01" 
#> ATCGGTGATTGCAG-1 ATCGTTTGCCTACC-1 ATCGTTTGGGTACT-1 ATCGTTTGTGCCAA-1 ATCTACACCCGCTT-1 
#>             "01"           "0222"           "0211"           "0211"           "0211" 
#> ATCTACACCGGGAA-1 ATCTCAACAGGAGC-1 ATCTCAACCTCGAA-1 ATCTCAACCTTGTT-1 ATCTGGGAAACCAC-1 
#>             "01"            "041"             "01"           "0212"           "0222" 
#> ATCTGGGAAGTGTC-1 ATCTGGGATTCCGC-1 ATCTGTTGAACGGG-1 ATCTGTTGACCTCC-1 ATCTGTTGCCTTCG-1 
#>           "0222"             "01"             "01"             "01"           "0222" 
#> ATCTGTTGGTTGCA-1 ATCTTGACACCAAC-1 ATCTTGACCTCCCA-1 ATCTTTCTGCATCA-1 ATCTTTCTGTTTCT-1 
#>             "01"             "01"           "0211"             "01"             "01" 
#> ATCTTTCTTGTCCC-1 ATGAAACTCTGTGA-1 ATGAAACTGAGGCA-1 ATGAAGGAACAGCT-1 ATGAAGGACCTGTC-1 
#>            "032"             "01"             "01"            "031"            "042" 
#> ATGAAGGACCTTAT-1 ATGAAGGACTAGTG-1 ATGAAGGACTTGCC-1 ATGACGTGACGACT-1 ATGACGTGATCGGT-1 
#>            "041"            "041"            "032"            "041"           "0221" 
#> ATGAGAGAAAGTGA-1 ATGAGAGAACGCAT-1 ATGAGAGAAGTAGA-1 ATGAGCACACAGCT-1 ATGAGCACATCTTC-1 
#>             "01"             "01"            "041"             "01"             "01" 
#> ATGATAACTTCACT-1 ATGATATGAAACAG-1 ATGATATGACTGGT-1 ATGATATGAGCACT-1 ATGATATGGTCATG-1 
#>            "032"             "01"             "01"             "01"             "01" 
#> ATGATATGGTGCTA-1 ATGATATGTTGTCT-1 ATGCACGAATGTCG-1 ATGCACGACTGTAG-1 ATGCACGAGAACCT-1 
#>            "032"           "0222"            "041"             "01"            "042" 
#> ATGCACGAGTTCGA-1 ATGCACGATTGGTG-1 ATGCAGTGTTACCT-1 ATGCAGTGTTCTAC-1 ATGCCAGAACGACT-1 
#>             "01"           "0222"            "041"             "01"             "01" 
#> ATGCCAGACAGTCA-1 ATGCCGCTTGAACC-1 ATGCGATGCTATGG-1 ATGCGATGCTGAGT-1 ATGCGATGGTTACG-1 
#>           "0211"           "0222"           "0222"             "01"            "042" 
#> ATGCGCCTTCATTC-1 ATGCTTTGCGAATC-1 ATGCTTTGGGCGAA-1 ATGCTTTGTAGTCG-1 ATGGACACATCGGT-1 
#>             "01"             "01"             "01"            "041"             "01" 
#> ATGGACACGCATCA-1 ATGGGTACAACCTG-1 ATGGGTACATCGGT-1 ATGGGTACTATTCC-1 ATGGGTACTGGGAG-1 
#>            "032"            "041"            "032"             "01"             "01" 
#> ATGTAAACACCTCC-1 ATGTAAACCCGCTT-1 ATGTAAACGGGATG-1 ATGTAAACTCTCCG-1 ATGTAAACTTCACT-1 
#>             "01"             "01"           "0222"             "01"           "0212" 
#> ATGTACCTCAGTCA-1 ATGTACCTTAGTCG-1 ATGTACCTTTATCC-1 ATGTACCTTTCACT-1 ATGTCACTAATGCC-1 
#>             "01"             "01"           "0211"            "031"           "0212" 
#> ATGTCACTCTGCTC-1 ATGTCGGAGGTGAG-1 ATGTTCACAGTCTG-1 ATGTTCACCGTAGT-1 ATGTTGCTTTCAGG-1 
#>             "01"             "01"           "0212"             "01"             "01" 
#> ATTAACGATGAGAA-1 ATTAACGATGCAAC-1 ATTAAGACTGCAGT-1 ATTACCTGCCTTAT-1 ATTACCTGGAGGAC-1 
#>            "032"            "031"             "01"           "0212"           "0221" 
#> ATTAGATGTTTCAC-1 ATTATGGAATCTCT-1 ATTCAAGAACGGGA-1 ATTCAAGACCTTTA-1 ATTCAGCTCATTGG-1 
#>             "01"             "01"             "01"             "01"            "032" 
#> ATTCCAACCATTGG-1 ATTCCAACTTAGGC-1 ATTCGACTCACTAG-1 ATTCGACTGAATAG-1 ATTCGACTTTTGTC-1 
#>           "0212"            "032"            "031"           "0212"           "0221" 
#> ATTCGGGAAAGGCG-1 ATTCGGGATTAGGC-1 ATTCTTCTGATACC-1 ATTGAATGGACGGA-1 ATTGATGAAGGTTC-1 
#>           "0212"             "01"             "01"             "01"             "01" 
#> ATTGATGACTGAGT-1 ATTGATGAGCGAAG-1 ATTGATGATCTATC-1 ATTGCACTGACGGA-1 ATTGCACTGAGAGC-1 
#>             "01"             "01"             "01"             "01"           "0221" 
#> ATTGCACTGGAGCA-1 ATTGCACTTAGCCA-1 ATTGCACTTGCTTT-1 ATTGCTTGTTACTC-1 ATTGGTCTGACTAC-1 
#>           "0211"             "01"           "0221"            "042"            "042" 
#> ATTGGTCTTGTCTT-1 ATTGTAGATTCCCG-1 ATTGTAGATTGCAG-1 ATTGTCTGCGTACA-1 ATTTAGGAACCATG-1 
#>            "041"           "0222"             "01"             "01"           "0221" 
#> ATTTAGGACAGAGG-1 ATTTCCGAGATGAA-1 ATTTCCGAGTGCTA-1 ATTTCGTGTATGGC-1 ATTTCTCTACTTTC-1 
#>             "01"             "01"             "01"            "031"           "0221" 
#> ATTTCTCTAGCAAA-1 ATTTCTCTCACTTT-1 ATTTCTCTTCCCAC-1 ATTTGCACAAGATG-1 CAAAGCACAGCTCA-1 
#>             "01"           "0221"             "01"           "0211"             "01" 
#> CAAAGCACCGTAAC-1 CAAAGCACGGTAAA-1 CAAAGCTGAAAGTG-1 CAAAGCTGTTGCTT-1 CAAATATGTGACAC-1 
#>            "042"            "032"             "01"           "0212"             "01" 
#> CAAATTGAGGGCAA-1 CAAATTGATGGAGG-1 CAACCAGAAAAGTG-1 CAACCAGAAGTGCT-1 CAACCAGAGTTCAG-1 
#>             "01"           "0211"             "01"             "01"           "0222" 
#> CAACCAGATAGAAG-1 CAACCGCTGTTCAG-1 CAACCGCTTTGAGC-1 CAACGATGCGCAAT-1 CAACGTGACTCCAC-1 
#>           "0211"             "01"             "01"           "0221"           "0222" 
#> CAACGTGAGCCATA-1 CAACGTGATCAAGC-1 CAAGAAGACCACAA-1 CAAGAAGACGTCTC-1 CAAGAAGATTCTAC-1 
#>            "031"           "0212"            "031"           "0222"             "01" 
#> CAAGACTGACCTGA-1 CAAGACTGAGTAGA-1 CAAGCTGACCATAG-1 CAAGCTGATCTATC-1 CAAGGACTGTTCAG-1 
#>            "041"            "042"           "0221"            "031"             "01" 
#> CAAGGACTTCTTTG-1 CAAGGTTGCTCCAC-1 CAAGGTTGTCATTC-1 CAAGGTTGTCTGGA-1 CAAGTCGAAACAGA-1 
#>            "031"             "01"            "041"            "032"            "042" 
#> CAAGTCGATAGCGT-1 CAATAAACGCCATA-1 CAATAATGAACTGC-1 CAATATGACATGGT-1 CAATATGACCTTCG-1 
#>           "0212"           "0211"           "0212"             "01"            "031" 
#> CAATATGACGTTAG-1 CAATATGAGGAGCA-1 CAATCGGAGAAACA-1 CAATCTACTGACTG-1 CAATTCACCCAACA-1 
#>             "01"             "01"             "01"            "032"            "031" 
#> CAATTCACGATAGA-1 CAATTCACTTGTGG-1 CAATTCTGCTTGTT-1 CAATTCTGGCGTAT-1 CACAACGATACGAC-1 
#>             "01"             "01"           "0222"           "0221"             "01" 
#> CACAATCTTGTTCT-1 CACAATCTTTCCAT-1 CACACCTGCTTGAG-1 CACACCTGTATGGC-1 CACAGAACCCTTGC-1 
#>             "01"             "01"             "01"             "01"            "042" 
#> CACAGAACCTGATG-1 CACAGATGGGATTC-1 CACAGATGGTTTCT-1 CACAGCCTGATACC-1 CACAGCCTTGCCAA-1 
#>             "01"             "01"           "0212"             "01"           "0221" 
#> CACAGCCTTGTAGC-1 CACAGTGATGAAGA-1 CACATACTACAGCT-1 CACATGGAACACGT-1 CACATGGAAGTCGT-1 
#>             "01"           "0212"            "031"             "01"             "01" 
#> CACCACTGCCAACA-1 CACCACTGGCGAAG-1 CACCCATGTTCTGT-1 CACCGGGAATCGAC-1 CACCGGGACGAGAG-1 
#>             "01"            "031"            "031"             "01"            "031" 
#> CACCGGGACGTGTA-1 CACCGGGACTTCTA-1 CACCGGGACTTGCC-1 CACCGGGATTCGGA-1 CACCGTACTAAGGA-1 
#>             "01"            "032"            "031"            "031"            "041" 
#> CACCGTACTAGCGT-1 CACCTGACACCCAA-1 CACCTGACCAGAAA-1 CACCTGACCTCAAG-1 CACCTGACGAAAGT-1 
#>             "01"            "031"             "01"            "031"            "042" 
#> CACCTGACTCGTAG-1 CACGAAACTTCCGC-1 CACGACCTCGATAC-1 CACGCTACAGAAGT-1 CACGCTACTGTTCT-1 
#>             "01"            "041"            "041"             "01"            "041" 
#> CACGGGACAGAGTA-1 CACGGGACATAAGG-1 CACGGGACGTAGGG-1 CACGGGTGCTTCGC-1 CACGGGTGGAGGAC-1 
#>             "01"             "01"             "01"            "031"            "031" 
#> CACGGGTGTGTTTC-1 CACTAACTCCTAAG-1 CACTAACTGAAAGT-1 CACTAGGATGATGC-1 CACTATACCCCGTT-1 
#>             "01"            "042"             "01"            "041"            "042" 
#> CACTATACGTTTGG-1 CACTGAGACAGTCA-1 CACTGCACTTCATC-1 CACTGCTGAGACTC-1 CACTGCTGGAAAGT-1 
#>            "031"           "0211"             "01"           "0221"             "01" 
#> CACTTAACCGAATC-1 CACTTAACCGTACA-1 CACTTTGACTCTAT-1 CACTTTGAGCTGTA-1 CAGAAGCTCTCAAG-1 
#>             "01"            "041"            "031"             "01"             "01" 
#> CAGACATGAACGGG-1 CAGACATGTCGACA-1 CAGACCCTAAGGTA-1 CAGACCCTAATGCC-1 CAGACCCTAGGAGC-1 
#>             "01"             "01"           "0221"             "01"             "01" 
#> CAGACTGAGTATGC-1 CAGATCGAATGTCG-1 CAGATCGACCTGAA-1 CAGATCGATATGGC-1 CAGATGACATTCTC-1 
#>             "01"            "042"             "01"             "01"            "032" 
#> CAGCAATGCCTTCG-1 CAGCAATGGAGGGT-1 CAGCAATGGTGCTA-1 CAGCAATGTCTACT-1 CAGCAATGTGACCA-1 
#>             "01"            "032"             "01"           "0212"             "01" 
#> CAGCAATGTGAGGG-1 CAGCACCTAAGCCT-1 CAGCACCTAGGCGA-1 CAGCACCTGTAGGG-1 CAGCATGACAACCA-1 
#>           "0211"             "01"             "01"           "0222"           "0212" 
#> CAGCATGAGACGTT-1 CAGCCTACCCAACA-1 CAGCCTTGCTACCC-1 CAGCCTTGGGGACA-1 CAGCGGACACCCTC-1 
#>             "01"             "01"           "0212"             "01"             "01" 
#> CAGCGGACCTTTAC-1 CAGCGTCTAAAGCA-1 CAGCGTCTTATCGG-1 CAGCTAGATGTGAC-1 CAGCTCTGAGGCGA-1 
#>            "032"             "01"             "01"           "0211"             "01" 
#> CAGCTCTGCAAGCT-1 CAGCTCTGTCGTAG-1 CAGCTCTGTGTGGT-1 CAGGAACTAACTGC-1 CAGGAACTCTCAGA-1 
#>            "031"           "0222"            "032"             "01"           "0211" 
#> CAGGCCGAACACCA-1 CAGGCCGAACACGT-1 CAGGCCGAACGACT-1 CAGGCCGAATCTCT-1 CAGGCCGACTAGCA-1 
#>             "01"             "01"             "01"           "0222"            "042" 
#> CAGGGCACCATACG-1 CAGGGCACCCAACA-1 CAGGGCACTCCCGT-1 CAGGTAACAGACTC-1 CAGGTATGAGTCGT-1 
#>            "041"             "01"             "01"           "0212"             "01" 
#> CAGGTATGTGCTTT-1 CAGGTTGAGGATCT-1 CAGTGATGGACGGA-1 CAGTGATGGCTAAC-1 CAGTGATGGGACAG-1 
#>             "01"            "042"            "041"            "032"             "01" 
#> CAGTGATGTAAGGA-1 CAGTGATGTACGCA-1 CAGTGTGATGTCAG-1 CAGTTACTAAGGTA-1 CAGTTACTGATAGA-1 
#>            "042"            "041"             "01"            "042"             "01" 
#> CAGTTGGAAAGAGT-1 CAGTTGGACATACG-1 CAGTTTACACACGT-1 CAGTTTACCCCAAA-1 CATAAAACGGAGCA-1 
#>           "0222"             "01"            "032"             "01"           "0212" 
#> CATAAATGAACTGC-1 CATAACCTTCTCCG-1 CATACTACCTCGAA-1 CATACTACCTGAAC-1 CATACTACGTACCA-1 
#>             "01"             "01"             "01"             "01"           "0211" 
#> CATACTTGGGTTAC-1 CATAGTCTAATCGC-1 CATAGTCTCACTTT-1 CATATAGACTAAGC-1 CATATAGATCAGGT-1 
#>           "0221"             "01"             "01"           "0212"            "042" 
#> CATCAACTAGAAGT-1 CATCAACTCCCTCA-1 CATCAGGACTTCCG-1 CATCAGGATAGCCA-1 CATCAGGATCCTAT-1 
#>             "01"             "01"            "032"            "032"           "0221" 
#> CATCAGGATGCACA-1 CATCAGGATTTCGT-1 CATCATACCGCATA-1 CATCATACGGAGCA-1 CATCATACTCAAGC-1 
#>           "0221"           "0211"           "0222"            "041"             "01" 
#> CATCGCTGGGATCT-1 CATCGCTGTGGCAT-1 CATCGGCTATGCTG-1 CATCGGCTTTGGCA-1 CATCTCCTATGTGC-1 
#>             "01"            "041"             "01"             "01"            "042" 
#> CATCTCCTCGAACT-1 CATGAGACACGGGA-1 CATGAGACGTTGAC-1 CATGAGACTCGCCT-1 CATGCCACGGGTGA-1 
#>           "0222"            "041"            "032"             "01"             "01" 
#> CATGCCACTGCCAA-1 CATGCGCTAGTCAC-1 CATGCGCTCAGATC-1 CATGCGCTTTGCAG-1 CATGGCCTAGGGTG-1 
#>             "01"           "0221"           "0211"           "0221"           "0211" 
#> CATGGCCTGTGCAT-1 CATGTACTATCGTG-1 CATGTTACAGTCGT-1 CATGTTACCTGAGT-1 CATGTTTGGGGATG-1 
#>             "01"            "031"            "031"             "01"           "0212" 
#> CATTACACACGGAG-1 CATTACACCAACTG-1 CATTACACGGAGTG-1 CATTACACTACTCT-1 CATTAGCTCCACAA-1 
#>            "041"            "032"             "01"             "01"           "0212" 
#> CATTGACTAGCGGA-1 CATTGGGACTCGAA-1 CATTGTACAGCGTT-1 CATTGTACTCGATG-1 CATTGTACTTATCC-1 
#>           "0212"             "01"             "01"            "042"             "01" 
#> CATTGTACTTTGCT-1 CATTGTTGCTAGTG-1 CATTTCGACTCTAT-1 CATTTCGAGATACC-1 CATTTGACCACACA-1 
#>           "0221"             "01"            "031"            "032"            "031" 
#> CATTTGACCCTGAA-1 CATTTGTGACGACT-1 CATTTGTGCATTGG-1 CATTTGTGCGGAGA-1 CATTTGTGGGATCT-1 
#>            "031"            "042"             "01"             "01"            "042" 
#> CCAAAGTGCTACGA-1 CCAAAGTGTGAGAA-1 CCAACCTGAAGTAG-1 CCAACCTGACGTAC-1 CCAACCTGTTCGCC-1 
#>           "0222"           "0211"            "031"           "0212"           "0212" 
#> CCAAGAACCCAATG-1 CCAAGAACGTAGCT-1 CCAAGAACGTGTCA-1 CCAAGAACTACTGG-1 CCAAGAACTCCTAT-1 
#>             "01"             "01"             "01"            "031"            "041" 
#> CCAAGATGTCATTC-1 CCAAGATGTTTCAC-1 CCAAGTGAGGAACG-1 CCAAGTGATCAAGC-1 CCAATTTGAACGTC-1 
#>             "01"             "01"             "01"             "01"           "0212" 
#> CCACCATGAACGTC-1 CCACCATGATCGGT-1 CCACCATGGACGAG-1 CCACCATGGGGAGT-1 CCACCATGTCCTGC-1 
#>             "01"             "01"           "0221"             "01"            "031" 
#> CCACTGACCCGCTT-1 CCACTGTGGGAAGC-1 CCACTGTGTGTAGC-1 CCACTTCTCGGGAA-1 CCAGAAACCCTGTC-1 
#>           "0212"           "0211"             "01"           "0222"            "041" 
#> CCAGAAACGAACTC-1 CCAGAAACGGTCTA-1 CCAGACCTCTGAGT-1 CCAGACCTTGTGGT-1 CCAGCACTGCGATT-1 
#>             "01"             "01"            "041"             "01"           "0221" 
#> CCAGCGGAAAGGCG-1 CCAGCGGACGACTA-1 CCAGCGGATGGGAG-1 CCAGCTACACAGTC-1 CCAGCTACCAGCTA-1 
#>           "0211"           "0212"             "01"             "01"            "041" 
#> CCAGGTCTACACCA-1 CCAGGTCTAGCATC-1 CCAGGTCTATGGTC-1 CCAGTCACACTGGT-1 CCAGTCACACTGTG-1 
#>            "041"           "0211"             "01"           "0212"            "041" 
#> CCAGTCACGTTGTG-1 CCAGTGCTAACCAC-1 CCAGTGCTCGTAGT-1 CCATCCGAAAGCAA-1 CCATCCGAACGACT-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> CCATCCGAAGGTTC-1 CCATCCGATTCGCC-1 CCATCGTGAACGGG-1 CCATCGTGCTAGAC-1 CCCAACACCTCGCT-1 
#>            "041"           "0211"             "01"           "0221"            "042" 
#> CCCAACACGCATCA-1 CCCAACACTTTGTC-1 CCCAACTGCAATCG-1 CCCAGACTGCCTTC-1 CCCAGACTGGTTTG-1 
#>             "01"           "0222"           "0211"           "0222"            "042" 
#> CCCAGACTTTCGCC-1 CCCAGTTGCAGTTG-1 CCCAGTTGGGTACT-1 CCCAGTTGTCTATC-1 CCCGATTGTGTTTC-1 
#>           "0221"           "0222"             "01"            "041"             "01" 
#> CCCGGAGAAGGGTG-1 CCCTACGAATTGGC-1 CCCTAGTGCAAAGA-1 CCCTCAGACACTTT-1 CCCTCAGACGAGAG-1 
#>           "0211"           "0211"             "01"            "042"             "01" 
#> CCCTCAGAGGTCAT-1 CCCTGAACTAAAGG-1 CCCTGATGCAACCA-1 CCCTGATGCAAGCT-1 CCCTTACTAACCAC-1 
#>             "01"            "041"             "01"            "042"           "0222" 
#> CCCTTACTGCAGTT-1 CCGAAAACCTTGTT-1 CCGACACTGGTTTG-1 CCGACTACCCAGTA-1 CCGACTACCGTGTA-1 
#>             "01"           "0221"             "01"           "0222"             "01" 
#> CCGACTACTGAGGG-1 CCGATAGACCTAAG-1 CCGATAGAGTTGGT-1 CCGCGAGACACACA-1 CCGCGAGAGGTTCA-1 
#>             "01"             "01"           "0222"           "0212"             "01" 
#> CCGCTATGGGACGA-1 CCGCTATGTGCAAC-1 CCGCTATGTGCACA-1 CCGGTACTGTCCTC-1 CCGTACACAAGCAA-1 
#>            "041"           "0222"           "0212"             "01"             "01" 
#> CCGTACACAGCGTT-1 CCGTACACGTCATG-1 CCGTACACGTTGGT-1 CCGTACACTAACGC-1 CCTAAACTTTCGTT-1 
#>            "042"            "031"           "0222"             "01"             "01" 
#> CCTAAGGACCCAAA-1 CCTAAGGACTAGCA-1 CCTAAGGAGGGCAA-1 CCTAAGGATGATGC-1 CCTAAGGATGTCAG-1 
#>             "01"           "0211"            "031"             "01"             "01" 
#> CCTACCGACTCTTA-1 CCTACCGAGGGATG-1 CCTAGAGAGGTGAG-1 CCTATAACCAAAGA-1 CCTATAACGAGACG-1 
#>             "01"            "042"            "041"             "01"           "0211" 
#> CCTATAACTCAGAC-1 CCTATAACTGCATG-1 CCTCGAACACTTTC-1 CCTCGAACCCGTAA-1 CCTCGAACGTATCG-1 
#>             "01"           "0221"            "032"           "0221"             "01" 
#> CCTCGAACTTACTC-1 CCTCTACTCTTCGC-1 CCTCTACTGGCATT-1 CCTGACTGAAGTAG-1 CCTGACTGGGGAGT-1 
#>             "01"           "0212"             "01"             "01"             "01" 
#> CCTGACTGTGTCTT-1 CCTGCAACACGTTG-1 CCTGGACTCGTGAT-1 CCTTAATGCCCAAA-1 CCTTAATGTTCTAC-1 
#>            "041"           "0212"             "01"            "041"           "0221" 
#> CCTTCACTACGACT-1 CCTTCACTCAGTCA-1 CCTTCACTGGAGTG-1 CCTTTAGATTCATC-1 CGAACATGCCCTAC-1 
#>             "01"            "042"           "0211"           "0212"           "0212" 
#> CGAACATGTCAGAC-1 CGAAGACTGGAACG-1 CGAAGACTGTTACG-1 CGAAGGGAAACCTG-1 CGAAGGGATCCGAA-1 
#>             "01"             "01"             "01"            "031"            "042" 
#> CGAAGTACCAACTG-1 CGAATCGAGGAGCA-1 CGAATCGAGGAGGT-1 CGACAAACCCATAG-1 CGACAAACCGACAT-1 
#>            "041"           "0211"             "01"             "01"            "042" 
#> CGACCACTAAAGTG-1 CGACCACTGCCAAT-1 CGACCGGAAGGTCT-1 CGACCGGATGGAAA-1 CGACCTTGCTAGTG-1 
#>            "032"            "032"             "01"             "01"             "01" 
#> CGACGTCTATCGTG-1 CGACGTCTCGTGTA-1 CGACGTCTGAGGCA-1 CGACTCACGTCGTA-1 CGACTCACGTTGCA-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> CGACTCTGTGTGAC-1 CGACTGCTTCCTCG-1 CGAGAACTAAGGCG-1 CGAGAACTACGTTG-1 CGAGAACTTGTTCT-1 
#>             "01"           "0212"            "031"             "01"           "0212" 
#> CGAGATTGGACACT-1 CGAGATTGGCCATA-1 CGAGCCGAACACCA-1 CGAGCCGAGGCGAA-1 CGAGCGTGCTCCAC-1 
#>            "031"            "031"             "01"             "01"             "01" 
#> CGAGCGTGGATACC-1 CGAGCGTGTATGCG-1 CGAGGAGACCTCCA-1 CGAGGAGATGTCGA-1 CGAGGCACCTATGG-1 
#>             "01"           "0211"            "041"             "01"            "031" 
#> CGAGGCACTATGCG-1 CGAGGCACTCTTCA-1 CGAGGCTGACGCTA-1 CGAGGCTGGCAGTT-1 CGAGGGCTACGACT-1 
#>           "0222"             "01"            "032"           "0212"            "041" 
#> CGAGGGCTCGAATC-1 CGAGTATGTCACCC-1 CGATACGAACAGTC-1 CGATACGACAGGAG-1 CGATACGATTCACT-1 
#>             "01"           "0221"           "0222"            "031"            "041" 
#> CGATAGACCCGTAA-1 CGATAGACCGTACA-1 CGATAGACGTAGGG-1 CGATAGACTGTTCT-1 CGATCAGAAGAACA-1 
#>           "0211"             "01"           "0211"             "01"            "031" 
#> CGATCAGAGAGGGT-1 CGATCAGAGGTACT-1 CGATCAGATGTGAC-1 CGATCCACCGGGAA-1 CGATCCACTTCCAT-1 
#>             "01"             "01"           "0222"            "031"            "041" 
#> CGCAAATGCTCGAA-1 CGCAACCTCCTTGC-1 CGCAACCTGGACGA-1 CGCACGGAGGACGA-1 CGCACGGATCTTTG-1 
#>             "01"             "01"             "01"            "041"             "01" 
#> CGCACTACAGAATG-1 CGCACTACAGCCAT-1 CGCACTACATTGGC-1 CGCACTACTCGCCT-1 CGCACTACTCGTGA-1 
#>             "01"             "01"             "01"            "041"             "01" 
#> CGCACTTGTCACGA-1 CGCAGGACAGATCC-1 CGCAGGACCTACTT-1 CGCAGGACTTGTCT-1 CGCAGGTGCACTGA-1 
#>           "0212"             "01"             "01"           "0221"             "01" 
#> CGCAGGTGCCATAG-1 CGCAGGTGGGAACG-1 CGCATAGATCACGA-1 CGCCATACTGCAAC-1 CGCCATTGAGAGGC-1 
#>           "0221"             "01"           "0211"             "01"             "01" 
#> CGCCATTGCTATGG-1 CGCCATTGGAGACG-1 CGCCATTGGAGCAG-1 CGCCATTGTACTGG-1 CGCCGAGAGCTTAG-1 
#>             "01"             "01"            "042"            "042"            "032" 
#> CGCCTAACGAATGA-1 CGCCTAACTGCTCC-1 CGCGAGACACAGCT-1 CGCGAGACAGGTCT-1 CGCGAGACGCTACA-1 
#>           "0222"             "01"             "01"            "042"             "01" 
#> CGCGATCTCAGTCA-1 CGCGATCTGTTGAC-1 CGCGATCTTTCTTG-1 CGCGGATGGCCAAT-1 CGCTAAGAATGTCG-1 
#>           "0212"           "0212"            "042"             "01"             "01" 
#> CGCTAAGACAACTG-1 CGCTAAGACCCTTG-1 CGCTACTGAACAGA-1 CGCTACTGAGAACA-1 CGCTACTGTGAGCT-1 
#>             "01"             "01"           "0222"             "01"             "01" 
#> CGCTACTGTTCCCG-1 CGCTCATGCATTTC-1 CGGAATTGGTTTGG-1 CGGAATTGTGGAGG-1 CGGACCGATGCGTA-1 
#>            "031"           "0211"             "01"             "01"            "031" 
#> CGGACCGATGGGAG-1 CGGACTCTAAACAG-1 CGGACTCTCCAATG-1 CGGACTCTCCTCGT-1 CGGAGGCTATTCCT-1 
#>             "01"            "041"             "01"            "032"             "01" 
#> CGGAGGCTTGGATC-1 CGGATAACAACGAA-1 CGGATAACAGCTCA-1 CGGATAACTCAGTG-1 CGGCACGAACTCAG-1 
#>             "01"           "0212"             "01"           "0211"             "01" 
#> CGGCACGAAGGGTG-1 CGGCACGACTACGA-1 CGGCATCTTAGAAG-1 CGGCATCTTCGTAG-1 CGGCCAGAAAGGTA-1 
#>             "01"           "0221"             "01"           "0212"             "01" 
#> CGGCCAGAGAGGCA-1 CGGCGAACCAGTCA-1 CGGCGAACGACAAA-1 CGGCGAACGGTCTA-1 CGGCGAACTACTTC-1 
#>            "031"           "0222"            "032"             "01"            "032" 
#> CGGGACTGCGTGTA-1 CGGGACTGGAATAG-1 CGGGCATGACCCAA-1 CGGGCATGTCTCTA-1 CGGGCATGTTGTGG-1 
#>             "01"            "031"            "031"            "031"             "01" 
#> CGGTAAACTCGCAA-1 CGGTCACTGTTTGG-1 CGGTCACTTACTTC-1 CGTAACGATCGCCT-1 CGTACCACACACAC-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> CGTACCACACGTTG-1 CGTACCACCTCATT-1 CGTACCACGGAGCA-1 CGTACCTGGCATCA-1 CGTAGCCTCTCTCG-1 
#>             "01"             "01"             "01"            "032"           "0212" 
#> CGTAGCCTGCGAAG-1 CGTAGCCTGTATGC-1 CGTCAAGAAAGGTA-1 CGTCAAGAACGTGT-1 CGTCAAGACAGAGG-1 
#>             "01"           "0221"           "0211"             "01"             "01" 
#> CGTCAAGACAGGAG-1 CGTCCATGCTCTTA-1 CGTCGACTTTCCGC-1 CGTGATGACGCTAA-1 CGTGATGAGGTTCA-1 
#>            "031"             "01"             "01"             "01"             "01" 
#> CGTGCACTTATGGC-1 CGTGTAGAAAAACG-1 CGTGTAGACGATAC-1 CGTGTAGAGTTACG-1 CGTGTAGAGTTCAG-1 
#>           "0222"             "01"            "031"            "032"           "0211" 
#> CGTGTAGATTCGGA-1 CGTTAGGAAACCAC-1 CGTTAGGATCATTC-1 CGTTATACCCTGAA-1 CGTTTAACTGGTCA-1 
#>            "032"             "01"           "0222"            "031"             "01" 
#> CTAAACCTCTGACA-1 CTAAACCTGTGCAT-1 CTAACACTAACGTC-1 CTAACACTAGTGCT-1 CTAACGGAACCGAT-1 
#>            "032"            "042"             "01"           "0222"            "032" 
#> CTAACGGATTTCTG-1 CTAACTACGGCAAG-1 CTAAGGACACCATG-1 CTAAGGACCGTTAG-1 CTAAGGACGCCATA-1 
#>             "01"             "01"             "01"             "01"           "0212" 
#> CTAAGGTGCCTAAG-1 CTAAGGTGTTGCAG-1 CTAAGGTGTTTCTG-1 CTAATAGAGCTATG-1 CTAATGCTTGTGGT-1 
#>            "041"             "01"             "01"             "01"           "0212" 
#> CTACAACTCCCGTT-1 CTACCTCTCAACCA-1 CTACGCACACCTAG-1 CTACGCACTCTCCG-1 CTACGCACTGGTCA-1 
#>            "031"             "01"           "0221"             "01"            "032" 
#> CTACGGCTTTCTTG-1 CTACTATGAACCAC-1 CTACTATGATGTGC-1 CTACTATGCTAAGC-1 CTACTATGTAAAGG-1 
#>           "0222"           "0212"           "0211"             "01"            "041" 
#> CTACTCCTATGTCG-1 CTACTCCTGCCATA-1 CTAGAGACACTTTC-1 CTAGAGACAGCATC-1 CTAGAGACTTTGGG-1 
#>            "032"           "0211"             "01"            "031"           "0221" 
#> CTAGATCTCTCTAT-1 CTAGATCTTCGACA-1 CTAGGATGAGCCTA-1 CTAGGATGATCGTG-1 CTAGGCCTCTCAGA-1 
#>             "01"             "01"            "042"            "042"             "01" 
#> CTAGGTGATGGTTG-1 CTAGTTACCAGAGG-1 CTAGTTACCGCATA-1 CTAGTTACGAAACA-1 CTATAAGATCGTTT-1 
#>           "0221"             "01"             "01"            "032"            "042" 
#> CTATACTGAGGTTC-1 CTATACTGCCAGTA-1 CTATACTGCGCTAA-1 CTATACTGCTACGA-1 CTATACTGTCTCAT-1 
#>           "0211"             "01"           "0211"            "032"            "032" 
#> CTATACTGTTCGTT-1 CTATAGCTGTCACA-1 CTATAGCTTCGCTC-1 CTATAGCTTGCCTC-1 CTATCAACGAACTC-1 
#>             "01"             "01"           "0212"           "0212"             "01" 
#> CTATCAACGCAGAG-1 CTATCAACTTTGGG-1 CTATCCCTCCACCT-1 CTATGTACGAGAGC-1 CTATGTACGCTTAG-1 
#>             "01"             "01"           "0212"             "01"             "01" 
#> CTATGTACTGTTTC-1 CTATGTTGAAAGCA-1 CTATGTTGTCCTCG-1 CTATGTTGTCTCGC-1 CTATTGACAAACGA-1 
#>            "042"             "01"             "01"             "01"           "0211" 
#> CTATTGACACTGGT-1 CTATTGACGGTGAG-1 CTATTGTGGCAAGG-1 CTCAATTGGTTCAG-1 CTCAATTGGTTGCA-1 
#>           "0222"           "0222"             "01"             "01"           "0212" 
#> CTCAGAGATAGAAG-1 CTCAGCACTCTAGG-1 CTCAGCACTGAACC-1 CTCAGCACTTGCAG-1 CTCAGCTGAACCTG-1 
#>             "01"             "01"           "0211"             "01"           "0212" 
#> CTCAGCTGCAGTTG-1 CTCAGGCTCGTTGA-1 CTCAGGCTGCTAAC-1 CTCATTGACCTTAT-1 CTCATTGATGCTTT-1 
#>             "01"           "0221"             "01"             "01"           "0222" 
#> CTCCACGAGAGATA-1 CTCCATCTCTTAGG-1 CTCCATCTGACGAG-1 CTCCGAACAAGTGA-1 CTCCTACTGCCTTC-1 
#>           "0222"             "01"             "01"           "0221"           "0211" 
#> CTCGAAGATGTGGT-1 CTCGAAGATTAGGC-1 CTCGACTGCTCTAT-1 CTCGACTGGGTGAG-1 CTCGACTGGTTGAC-1 
#>             "01"           "0212"             "01"             "01"            "032" 
#> CTCGAGCTCTGGAT-1 CTCGCATGACTTTC-1 CTCGCATGCTTAGG-1 CTCTAAACCTCGAA-1 CTCTAAACGGCGAA-1 
#>            "032"             "01"             "01"             "01"             "01" 
#> CTCTAATGTCCAAG-1 CTGAACGACAGTCA-1 CTGAACGATGAGGG-1 CTGAAGACCCAACA-1 CTGAAGACGTGCAT-1 
#>           "0212"             "01"             "01"             "01"            "042" 
#> CTGAAGTGAAGCCT-1 CTGAAGTGCAGCTA-1 CTGAAGTGGCTATG-1 CTGAAGTGTCCAGA-1 CTGAATCTGAATAG-1 
#>           "0221"            "041"             "01"             "01"             "01" 
#> CTGACAGAATCGTG-1 CTGACCACAGCAAA-1 CTGAGAACCGGGAA-1 CTGAGAACGTAAAG-1 CTGATACTAGTAGA-1 
#>            "031"             "01"             "01"            "032"             "01" 
#> CTGATTTGGTGTTG-1 CTGCAGCTAACCGT-1 CTGCAGCTGACACT-1 CTGCAGCTGGATTC-1 CTGCAGCTTGGCAT-1 
#>           "0222"             "01"             "01"           "0222"             "01" 
#> CTGCCAACAGGAGC-1 CTGCCAACCAGCTA-1 CTGCCAACTAACCG-1 CTGCCAACTGCTCC-1 CTGCCAACTTGCAG-1 
#>             "01"             "01"           "0212"            "031"             "01" 
#> CTGCCAACTTGCTT-1 CTGCGACTCCACCT-1 CTGGAAACAAACGA-1 CTGGAAACATCGAC-1 CTGGATGACTGGAT-1 
#>             "01"            "031"            "031"             "01"            "031" 
#> CTGGATGACTTGTT-1 CTGGATGATGTGAC-1 CTGGCACTCAAGCT-1 CTGTAACTAACCAC-1 CTGTAACTAGCGTT-1 
#>             "01"            "041"           "0212"             "01"             "01" 
#> CTGTATACGTAAAG-1 CTGTATACGTACGT-1 CTGTATACGTTGGT-1 CTGTGAGACAACCA-1 CTGTGAGACCTTGC-1 
#>             "01"           "0222"             "01"           "0221"            "031" 
#> CTGTGAGACGAACT-1 CTGTGAGACTGTAG-1 CTTAAAGAACCTGA-1 CTTAACACCTGTAG-1 CTTAACACTATCGG-1 
#>           "0212"           "0212"             "01"             "01"            "041" 
#> CTTAAGCTACCTAG-1 CTTAAGCTAGTACC-1 CTTAAGCTCATCAG-1 CTTAAGCTCCGCTT-1 CTTACAACTAACGC-1 
#>             "01"             "01"             "01"            "042"             "01" 
#> CTTACAACTCCCGT-1 CTTACTGACGTACA-1 CTTAGACTAAACGA-1 CTTAGGGACTTGCC-1 CTTAGGGAGAATCC-1 
#>           "0211"             "01"             "01"             "01"             "01" 
#> CTTATCGACTCATT-1 CTTCACCTACCTGA-1 CTTCATGAAGCATC-1 CTTCATGAAGTACC-1 CTTCATGACCGAAT-1 
#>             "01"           "0221"            "041"             "01"             "01" 
#> CTTGAACTACGCAT-1 CTTGATTGAGGTTC-1 CTTGATTGATCTTC-1 CTTGATTGCATTCT-1 CTTGATTGTTTCGT-1 
#>             "01"            "031"           "0212"             "01"             "01" 
#> CTTGTATGACACCA-1 CTTGTATGCGCAAT-1 CTTTACGAGCGAAG-1 CTTTAGACCGTGAT-1 CTTTAGACGAGACG-1 
#>            "042"            "041"             "01"             "01"             "01" 
#> CTTTAGACGATACC-1 CTTTAGACGTTGGT-1 CTTTAGACTCATTC-1 CTTTAGTGACGGGA-1 CTTTAGTGGGTGGA-1 
#>             "01"             "01"             "01"            "032"             "01" 
#> CTTTCAGAGAAACA-1 CTTTGATGAGCACT-1 CTTTGATGTCTAGG-1 CTTTGATGTGTCCC-1 CTTTGATGTGTGGT-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> GAAACAGAACTACG-1 GAAACAGAATCACG-1 GAAACAGACATTCT-1 GAAACCTGATCGTG-1 GAAACCTGATGCCA-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> GAAACCTGCTTATC-1 GAAACCTGGACTAC-1 GAAACCTGTGCTAG-1 GAAAGATGATTTCC-1 GAAAGATGCTGATG-1 
#>             "01"           "0221"             "01"             "01"           "0221" 
#> GAAAGATGCTTCGC-1 GAAAGATGTAAGGA-1 GAAAGCCTACGTTG-1 GAAAGTGAAAGTGA-1 GAAAGTGACCACAA-1 
#>           "0212"             "01"            "041"           "0222"           "0212" 
#> GAAAGTGACTCAAG-1 GAAATACTACCAAC-1 GAAATACTCTTAGG-1 GAAATACTTCCTCG-1 GAACACACGTGCAT-1 
#>             "01"           "0211"            "041"            "031"           "0222" 
#> GAACACACTGCCTC-1 GAACAGCTAACTGC-1 GAACAGCTCTCAGA-1 GAACCAACCACAAC-1 GAACCAACTTCCGC-1 
#>             "01"           "0221"           "0221"             "01"            "032" 
#> GAACCTGAACGTGT-1 GAACCTGAGAGACG-1 GAACCTGATGAACC-1 GAACGGGATACTTC-1 GAACTGTGACCTGA-1 
#>             "01"             "01"             "01"             "01"           "0221" 
#> GAACTGTGCCAGTA-1 GAAGAATGCAATCG-1 GAAGCGGACCTATT-1 GAAGCTACGAATGA-1 GAAGCTACGGTTTG-1 
#>           "0212"             "01"           "0222"           "0222"            "031" 
#> GAAGGGTGAAAGTG-1 GAAGGGTGCTTAGG-1 GAAGGTCTGAAAGT-1 GAAGGTCTGTTGCA-1 GAAGGTCTTAAAGG-1 
#>             "01"           "0212"            "031"             "01"           "0222" 
#> GAAGTAGACTCCCA-1 GAAGTAGATCCAAG-1 GAAGTCACCCTCGT-1 GAAGTCACCCTGTC-1 GAAGTCTGTCGCAA-1 
#>            "031"           "0221"           "0211"            "041"            "041" 
#> GAAGTCTGTTCTGT-1 GAAGTGCTAAACGA-1 GAAGTGCTCCGCTT-1 GAAGTGCTTAACCG-1 GAATGCACCCTAAG-1 
#>             "01"            "032"           "0222"             "01"             "01" 
#> GAATGCACCTTCGC-1 GAATGCTGCGGTAT-1 GAATTAACGATAAG-1 GAATTAACGGTCAT-1 GAATTAACGTCGTA-1 
#>            "032"             "01"             "01"             "01"            "032" 
#> GAATTAACTGAAGA-1 GACAACACAGGCGA-1 GACAACACATCGTG-1 GACAACACTCGCCT-1 GACAACTGAGGTTC-1 
#>            "042"             "01"             "01"             "01"             "01" 
#> GACAGGGAAGAGTA-1 GACAGGGAATGCCA-1 GACAGTACGAGCTT-1 GACAGTACTTCGGA-1 GACAGTTGAGTAGA-1 
#>            "041"             "01"           "0221"           "0221"            "042" 
#> GACATTCTCCACCT-1 GACCAAACGACTAC-1 GACCAAACGTATCG-1 GACCCTACTAAAGG-1 GACCTAGACCTCAC-1 
#>           "0222"           "0211"           "0212"            "041"             "01" 
#> GACCTAGACGAGAG-1 GACCTCACAAGGTA-1 GACCTCACGTACGT-1 GACCTCTGCATCAG-1 GACGAACTCCCACT-1 
#>             "01"             "01"           "0222"             "01"             "01" 
#> GACGATTGCCAATG-1 GACGCCGACCTTCG-1 GACGCTCTCTCTCG-1 GACGGCACACGGGA-1 GACGGCACGAGATA-1 
#>            "041"             "01"            "032"            "032"           "0222" 
#> GACGTAACCTATGG-1 GACGTAACCTGTGA-1 GACGTAACTATGGC-1 GACGTATGTTGACG-1 GACGTATGTTTGCT-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> GACGTCCTACGGAG-1 GACGTCCTCTCAAG-1 GACGTCCTGATAAG-1 GACTACGATGGTCA-1 GACTCCTGCTCGCT-1 
#>             "01"           "0212"            "042"            "041"             "01" 
#> GACTCCTGGGTTAC-1 GACTCCTGTTATCC-1 GACTCCTGTTGGTG-1 GACTGAACCAATCG-1 GACTGATGTGATGC-1 
#>             "01"             "01"           "0212"           "0212"             "01" 
#> GACTTTACATGCCA-1 GACTTTACGACAGG-1 GAGAAATGTTCTCA-1 GAGATAGAAAAAGC-1 GAGATCACGACAAA-1 
#>             "01"            "042"            "042"           "0222"           "0221" 
#> GAGATGCTCTGGAT-1 GAGATGCTGAATGA-1 GAGCAGGATTCCCG-1 GAGCATACTTTGCT-1 GAGCGCACGCGTAT-1 
#>            "031"             "01"            "031"           "0221"           "0211" 
#> GAGCGCACGGTGAG-1 GAGCGCTGAAGATG-1 GAGCGCTGTCTTAC-1 GAGCGGCTGGGAGT-1 GAGGACGACTCAGA-1 
#>             "01"            "032"           "0211"            "041"             "01" 
#> GAGGATCTGAAAGT-1 GAGGCAGACTTGCC-1 GAGGGAACACCAGT-1 GAGGGAACGAGGGT-1 GAGGGATGGGAAAT-1 
#>            "041"            "031"             "01"             "01"             "01" 
#> GAGGGCCTTCACCC-1 GAGGGTGAAGAGTA-1 GAGGTACTACGGTT-1 GAGGTACTACTCAG-1 GAGGTACTGACACT-1 
#>             "01"             "01"             "01"           "0212"            "032" 
#> GAGGTACTGGGAGT-1 GAGGTACTTAGCGT-1 GAGGTGGAGTACGT-1 GAGGTGGATCCTCG-1 GAGGTTACTCGTTT-1 
#>             "01"           "0222"             "01"            "032"           "0222" 
#> GAGGTTTGTAAGCC-1 GAGTCAACCATTCT-1 GAGTCAACGGGAGT-1 GAGTCTGATCGTGA-1 GAGTCTGATTTGGG-1 
#>           "0211"             "01"             "01"             "01"            "041" 
#> GAGTGACTCAGCTA-1 GAGTGACTCGGTAT-1 GAGTGACTCTTGCC-1 GAGTGACTGACTAC-1 GAGTGACTGTCTAG-1 
#>            "031"            "031"            "042"            "041"             "01" 
#> GAGTGGGAGTCTTT-1 GAGTGGGATGCCCT-1 GAGTGGGATGCTGA-1 GAGTGTTGCTGTAG-1 GAGTGTTGTGGTCA-1 
#>            "041"             "01"            "041"             "01"             "01" 
#> GAGTTGTGCATGGT-1 GAGTTGTGCTGAGT-1 GAGTTGTGGCGAGA-1 GAGTTGTGGTAGCT-1 GAGTTGTGTATGCG-1 
#>           "0211"            "031"           "0211"            "032"           "0221" 
#> GATAAGGAGAAACA-1 GATAAGGATTCACT-1 GATACTCTATCGGT-1 GATACTCTTACTTC-1 GATACTCTTGACTG-1 
#>           "0211"           "0212"             "01"             "01"           "0212" 
#> GATAGAGAAGGGTG-1 GATAGAGACTGTGA-1 GATAGAGATCACGA-1 GATAGCACCCATAG-1 GATAGCACGAAGGC-1 
#>            "031"             "01"           "0212"             "01"           "0222" 
#> GATAGCACTTGTCT-1 GATATAACAAGGTA-1 GATATAACACGCAT-1 GATATATGCTGGAT-1 GATATATGTCCGTC-1 
#>             "01"             "01"             "01"             "01"            "031" 
#> GATATATGTGGAGG-1 GATATCCTAGAAGT-1 GATATCCTCCCGTT-1 GATATTGACAGGAG-1 GATATTGACGAGTT-1 
#>           "0212"             "01"           "0211"            "031"           "0221" 
#> GATATTGAGCCAAT-1 GATCCCTGACCTTT-1 GATCCCTGTGTAGC-1 GATCCGCTGGTCAT-1 GATCGAACCGAGAG-1 
#>             "01"            "032"            "031"           "0212"             "01" 
#> GATCGATGACTAGC-1 GATCGATGGTAAAG-1 GATCGATGTAAGGA-1 GATCGTGACACTAG-1 GATCGTGATTCACT-1 
#>            "042"            "041"           "0212"             "01"             "01" 
#> GATCTACTGGTGAG-1 GATCTACTTTGCAG-1 GATCTTACACCCAA-1 GATCTTACCCTACC-1 GATCTTACGAATAG-1 
#>             "01"            "041"           "0221"             "01"           "0211" 
#> GATCTTACGAGATA-1 GATGCAACTCCAGA-1 GATGCCCTACGTAC-1 GATGCCCTCTCATT-1 GATGCCCTGGCAAG-1 
#>           "0212"             "01"             "01"             "01"           "0212" 
#> GATGCCCTTTTGCT-1 GATTACCTTGTTCT-1 GATTCGGAACGACT-1 GATTCGGACAGGAG-1 GATTCGGAGAAGGC-1 
#>             "01"             "01"             "01"           "0222"           "0221" 
#> GATTCTTGATTCGG-1 GATTCTTGCCGATA-1 GATTCTTGCGAGTT-1 GATTGGACCCGTTC-1 GATTGGACGGTGTT-1 
#>           "0222"             "01"            "041"            "042"            "041" 
#> GATTGGACTTTCGT-1 GATTGGTGTGTCAG-1 GATTTAGACACTCC-1 GATTTAGACTAAGC-1 GATTTAGATTCGTT-1 
#>            "041"             "01"           "0221"            "042"           "0211" 
#> GATTTGCTAACGAA-1 GATTTGCTAACGGG-1 GCAACCCTCCTCGT-1 GCAACTGATTGCGA-1 GCAAGACTACTGGT-1 
#>             "01"           "0211"           "0211"             "01"             "01" 
#> GCAAGACTAGGTCT-1 GCAAGACTCCCTTG-1 GCAATCGACTGCAA-1 GCAATCGAGACGTT-1 GCAATCGATCCTTA-1 
#>             "01"             "01"             "01"           "0222"           "0212" 
#> GCAATTCTCGTGTA-1 GCAATTCTTCTCCG-1 GCACAAACAATGCC-1 GCACAAACGGTACT-1 GCACAATGGTGCAT-1 
#>             "01"             "01"             "01"             "01"           "0212" 
#> GCACACCTGTGCTA-1 GCACCACTCATGAC-1 GCACCACTGTTTGG-1 GCACCACTTCCTTA-1 GCACCACTTTCGGA-1 
#>            "032"           "0212"           "0211"            "032"           "0212" 
#> GCACCTACGCGATT-1 GCACCTTGGCTGTA-1 GCACCTTGGGGAGT-1 GCACGGACCAGCTA-1 GCACGGTGACCTCC-1 
#>             "01"             "01"           "0222"             "01"             "01" 
#> GCACGGTGCTATGG-1 GCACTAGAACGGGA-1 GCACTAGAAGATGA-1 GCACTAGACCTTTA-1 GCACTAGACGTAAC-1 
#>           "0222"             "01"            "041"           "0221"            "041" 
#> GCACTAGAGTCGTA-1 GCACTAGATGCAAC-1 GCACTGCTGAGGCA-1 GCAGATACAGCGTT-1 GCAGATACGACGGA-1 
#>            "031"             "01"             "01"             "01"             "01" 
#> GCAGATACGCAGAG-1 GCAGCCGACAGTCA-1 GCAGCGTGCACTCC-1 GCAGCTCTCAATCG-1 GCAGCTCTGTTTCT-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> GCAGGGCTAAGAAC-1 GCAGGGCTAAGGGC-1 GCAGGGCTATCGAC-1 GCAGGGCTTGGGAG-1 GCAGTCCTAACTGC-1 
#>             "01"             "01"            "032"            "031"             "01" 
#> GCAGTCCTCTCTTA-1 GCATCAGATGCGTA-1 GCATGTGACAAGCT-1 GCATTGGAGAAGGC-1 GCCAAAACGAGGCA-1 
#>             "01"             "01"             "01"             "01"            "031" 
#> GCCAAATGATCGAC-1 GCCAACCTACGGTT-1 GCCAACCTCGCCTT-1 GCCACGGAGGCGAA-1 GCCACGGATACTGG-1 
#>             "01"             "01"             "01"           "0211"             "01" 
#> GCCACTACGTCTTT-1 GCCCAACTACCGAT-1 GCCCAACTATGGTC-1 GCCCATACAGCGTT-1 GCCGACGAACTCTT-1 
#>             "01"             "01"            "031"            "031"           "0222" 
#> GCCGAGTGCGTTGA-1 GCCGGAACGAACTC-1 GCCGGAACGTTCTT-1 GCCGGAACTGCACA-1 GCCGGAACTTACTC-1 
#>             "01"            "031"            "032"            "032"             "01" 
#> GCCGTACTACCTGA-1 GCCGTACTGGCAAG-1 GCCTACACAGTTCG-1 GCCTACACCACTGA-1 GCCTACACCTTGAG-1 
#>             "01"           "0211"            "032"           "0221"             "01" 
#> GCCTAGCTACGGAG-1 GCCTAGCTCTATTC-1 GCCTAGCTTCTCAT-1 GCCTAGCTTCTCTA-1 GCCTCAACCATGGT-1 
#>            "041"             "01"             "01"           "0221"             "01" 
#> GCCTCAACTCTTTG-1 GCCTCATGTCTTAC-1 GCCTGACTCTCAAG-1 GCGAAGGAACTCTT-1 GCGAAGGATGCCAA-1 
#>            "031"             "01"           "0212"             "01"             "01" 
#> GCGAGAGAGGGACA-1 GCGAGCACTGTCGA-1 GCGAGCACTTGACG-1 GCGAGCACTTGCTT-1 GCGATATGGTACGT-1 
#>             "01"            "041"             "01"           "0212"             "01" 
#> GCGATATGGTGTTG-1 GCGCACGAAGTCGT-1 GCGCACGACTTTAC-1 GCGCATCTAGGTCT-1 GCGCATCTGGTTAC-1 
#>             "01"             "01"           "0212"             "01"             "01" 
#> GCGCATCTTCGATG-1 GCGCATCTTGCTCC-1 GCGCATCTTTCTAC-1 GCGCGAACGTTCTT-1 GCGCGATGAACGGG-1 
#>             "01"            "032"             "01"            "041"             "01" 
#> GCGCGATGGTGCAT-1 GCGGAGCTCCTGAA-1 GCGGCAACCCGATA-1 GCGGCAACGGAGGT-1 GCGGCAACTGTCGA-1 
#>            "032"             "01"             "01"            "041"           "0211" 
#> GCGTAAACACGGTT-1 GCGTAATGCACCAA-1 GCGTATGAACACCA-1 GCGTATGATGAGAA-1 GCTACAGAAAGGTA-1 
#>           "0222"           "0221"             "01"           "0222"             "01" 
#> GCTACAGAATCTTC-1 GCTACCTGAGAAGT-1 GCTACCTGATCACG-1 GCTACGCTAGAATG-1 GCTACGCTAGCTAC-1 
#>            "041"           "0212"             "01"             "01"             "01" 
#> GCTACGCTCCCTAC-1 GCTAGAACAGAGGC-1 GCTAGAACGGATCT-1 GCTAGAACTCCCGT-1 GCTAGATGAGCTCA-1 
#>             "01"            "041"             "01"             "01"           "0212" 
#> GCTAGATGGCGATT-1 GCTATACTAAGGCG-1 GCTATACTAGCGTT-1 GCTATACTCTCTTA-1 GCTATACTGGACGA-1 
#>            "031"             "01"            "031"             "01"             "01" 
#> GCTCAAGAACCATG-1 GCTCAAGAAGTCAC-1 GCTCAGCTGTCTAG-1 GCTCCATGAGAAGT-1 GCTCCATGCCGAAT-1 
#>           "0222"           "0222"             "01"            "031"             "01" 
#> GCTCGACTCTAGTG-1 GCTGATGAGGTATC-1 GCTTAACTACAGTC-1 GCTTAACTACTGGT-1 GCTTAACTGCTGAT-1 
#>           "0211"           "0212"           "0211"            "031"             "01" 
#> GCTTAACTTAGACC-1 GCTTAACTTCAGTG-1 GGAACACTCACTTT-1 GGAACACTTCAGAC-1 GGAACTACTACTTC-1 
#>           "0211"             "01"           "0211"            "032"             "01" 
#> GGAACTTGAAGGTA-1 GGAACTTGAGAATG-1 GGAACTTGCTCCAC-1 GGAACTTGGGTAGG-1 GGAAGGACATCGGT-1 
#>           "0222"             "01"           "0212"            "041"           "0212" 
#> GGAAGGACCACTAG-1 GGAAGGACGAGGGT-1 GGAAGGACGCGAAG-1 GGAAGGTGGCGAGA-1 GGAATCTGAAGGGC-1 
#>             "01"             "01"             "01"            "032"             "01" 
#> GGAATCTGAGGAGC-1 GGAATCTGCTTAGG-1 GGAATCTGCTTGTT-1 GGAATCTGGGAGGT-1 GGAATGCTTTCTAC-1 
#>             "01"            "041"           "0212"             "01"             "01" 
#> GGACAGGAAAGGGC-1 GGACAGGAGTGCTA-1 GGACAGGATCTCGC-1 GGACCCGAAGCTAC-1 GGACCGTGCTTACT-1 
#>             "01"            "042"             "01"           "0222"           "0212" 
#> GGACCGTGGGAACG-1 GGACCGTGTAACGC-1 GGACCTCTGTAAGA-1 GGACCTCTTTTCTG-1 GGACGAGAGTGTCA-1 
#>           "0222"             "01"           "0211"            "031"           "0211" 
#> GGACGCTGACGCAT-1 GGACGCTGCTAGCA-1 GGACGCTGTCCTCG-1 GGAGAGACGTGAGG-1 GGAGCAGATTCAGG-1 
#>             "01"             "01"            "032"             "01"            "041" 
#> GGAGCCACCTTCTA-1 GGAGCGCTACGCAT-1 GGAGCGCTCCGAAT-1 GGAGGATGCCACCT-1 GGAGGATGGTTGAC-1 
#>            "042"           "0222"             "01"             "01"           "0211" 
#> GGAGGATGTCAGTG-1 GGAGGCCTCGTTGA-1 GGAGGCCTTTCTTG-1 GGAGGTGATACGCA-1 GGAGGTGATCGCTC-1 
#>           "0211"            "032"             "01"             "01"             "01" 
#> GGATACTGCAGCTA-1 GGATACTGTCTAGG-1 GGATAGCTCGTCTC-1 GGATAGCTCTGAAC-1 GGATGTACCAAAGA-1 
#>             "01"             "01"             "01"             "01"            "041" 
#> GGATGTACGCGAAG-1 GGATGTACGTCTTT-1 GGATGTACGTGTCA-1 GGATTTCTAGGTTC-1 GGATTTCTTTGTCT-1 
#>             "01"           "0211"            "031"             "01"           "0222" 
#> GGCAAGGAAAAAGC-1 GGCAAGGAAGAAGT-1 GGCAAGGACTTGGA-1 GGCAAGGAGGACTT-1 GGCAATACGCTAAC-1 
#>            "032"             "01"           "0212"             "01"            "041" 
#> GGCAATACGGCATT-1 GGCAATACGTTTCT-1 GGCACGTGGCTTAG-1 GGCACTCTTTTGTC-1 GGCATATGCTTATC-1 
#>             "01"            "042"           "0221"             "01"            "032" 
#> GGCATATGGGGAGT-1 GGCATATGTGTGAC-1 GGCCACGACAGAGG-1 GGCCAGACTGGTTG-1 GGCCCAGAAAGTAG-1 
#>            "032"             "01"             "01"             "01"           "0212" 
#> GGCCGAACAACGAA-1 GGCCGAACGCAGAG-1 GGCCGAACGTAGGG-1 GGCCGAACTCTAGG-1 GGCCGATGCAGGAG-1 
#>             "01"             "01"             "01"            "032"             "01" 
#> GGCCGATGCCGAAT-1 GGCCGATGTACTCT-1 GGCGACACTGCCCT-1 GGCGACTGCGTAAC-1 GGCGCATGCCTAAG-1 
#>             "01"             "01"            "031"             "01"           "0221" 
#> GGCGCATGCTCCAC-1 GGCGCATGTGGAAA-1 GGCGGACTAGAGGC-1 GGCGGACTAGGAGC-1 GGCGGACTCTGACA-1 
#>             "01"             "01"             "01"            "031"             "01" 
#> GGCGGACTCTTGGA-1 GGCGGACTTACTGG-1 GGCGGACTTGAACC-1 GGCTAAACACCTGA-1 GGCTAAACTCTTAC-1 
#>            "031"             "01"             "01"            "031"             "01" 
#> GGCTAATGAGCACT-1 GGCTAATGGTCTAG-1 GGCTCACTACTCAG-1 GGGAACGAAGCTCA-1 GGGAACGACACAAC-1 
#>            "031"             "01"           "0212"           "0221"            "041" 
#> GGGAACGAGTGTCA-1 GGGAAGTGTTGAGC-1 GGGACCACACGTTG-1 GGGACCACAGAACA-1 GGGACCACGAATAG-1 
#>           "0211"           "0211"            "031"             "01"             "01" 
#> GGGACCACGTCATG-1 GGGACCACTCAAGC-1 GGGACCACTCGTGA-1 GGGACCACTGCATG-1 GGGACCTGACCCTC-1 
#>             "01"             "01"             "01"             "01"           "0212" 
#> GGGACCTGCTTGCC-1 GGGACCTGTGGAGG-1 GGGATGGACGACAT-1 GGGATGGATACTTC-1 GGGATGGATGGTTG-1 
#>             "01"            "041"            "041"             "01"           "0212" 
#> GGGATTACGTCTAG-1 GGGCAAGATGCATG-1 GGGCACACGGTGAG-1 GGGCACACGTTGCA-1 GGGCAGCTTGGGAG-1 
#>             "01"           "0211"           "0221"             "01"             "01" 
#> GGGCAGCTTTTCTG-1 GGGCCAACCTTGGA-1 GGGCCAACGCGTTA-1 GGGCCAACTACGCA-1 GGGCCAACTCCAAG-1 
#>             "01"           "0222"            "042"           "0211"            "042" 
#> GGGCCATGATGGTC-1 GGGCCATGTTGACG-1 GGGTAACTCAGCTA-1 GGGTAACTCTAGTG-1 GGGTAACTCTGGAT-1 
#>             "01"             "01"             "01"            "041"             "01" 
#> GGGTTAACGTGCAT-1 GGTAAAGAGCTAAC-1 GGTACAACTGCAAC-1 GGTACATGAAAGCA-1 GGTACATGAGCTCA-1 
#>            "032"            "031"             "01"            "041"             "01" 
#> GGTACATGCGGTAT-1 GGTACATGGTTACG-1 GGTACATGTGGGAG-1 GGTACTGAACTCTT-1 GGTAGTACACCACA-1 
#>             "01"             "01"             "01"           "0212"             "01" 
#> GGTAGTACACTAGC-1 GGTAGTACCCTGTC-1 GGTAGTACGCCATA-1 GGTAGTACTGTCTT-1 GGTATCGAGACAAA-1 
#>           "0211"             "01"           "0211"             "01"           "0211" 
#> GGTATCGATGAACC-1 GGTCAAACCAAAGA-1 GGTCTAGAGAAACA-1 GGTCTAGATAGCGT-1 GGTGATACCGACTA-1 
#>            "041"             "01"           "0212"           "0222"            "041" 
#> GGTGATACGACTAC-1 GGTGATACTGTTTC-1 GGTGGAGAAACGGG-1 GGTGGAGAAGTAGA-1 GGTGGAGACAGATC-1 
#>           "0212"             "01"            "031"             "01"            "032" 
#> GGTGGAGATCGATG-1 GGTGGAGATCTCTA-1 GGTGGAGATTACTC-1 GGTTTACTACGCAT-1 GTAACGTGACCTCC-1 
#>             "01"           "0211"            "031"            "031"           "0222" 
#> GTAACGTGATCGGT-1 GTAACGTGCAGCTA-1 GTAACGTGGTTGAC-1 GTAAGCACAACGGG-1 GTAAGCACTCATTC-1 
#>            "041"            "042"            "042"             "01"            "041" 
#> GTAAGCTGGTACCA-1 GTAATAACCTTCTA-1 GTAATAACGTTGTG-1 GTACCCTGACAGTC-1 GTACCCTGGAGCTT-1 
#>           "0212"           "0212"             "01"           "0221"             "01" 
#> GTACCCTGTCCTTA-1 GTACCCTGTGAACC-1 GTACGTGAACGTTG-1 GTACTTTGTCGACA-1 GTAGACTGAGATGA-1 
#>            "031"             "01"            "031"             "01"           "0211" 
#> GTAGACTGTATTCC-1 GTAGCAACAGTCGT-1 GTAGCAACCATTTC-1 GTAGCAACGGTAGG-1 GTAGCATGCACTCC-1 
#>             "01"           "0212"            "042"           "0211"            "041" 
#> GTAGCATGTAAGCC-1 GTAGCCCTGACGTT-1 GTAGCTGAAGCTAC-1 GTAGCTGAATTCGG-1 GTAGGTACACGGGA-1 
#>           "0211"             "01"           "0221"             "01"           "0212" 
#> GTAGTGACCTCATT-1 GTAGTGTGAGCGGA-1 GTAGTGTGAGGCGA-1 GTAGTGTGTGGTTG-1 GTATCACTGGTAGG-1 
#>             "01"            "032"           "0211"             "01"           "0212" 
#> GTATCTACAGAAGT-1 GTATCTACGACGAG-1 GTATCTACGTTACG-1 GTATTAGAAACAGA-1 GTATTAGAGGTCTA-1 
#>            "031"            "031"             "01"            "031"             "01" 
#> GTATTCACACAGCT-1 GTATTCACGGGTGA-1 GTCAACGACACTGA-1 GTCAACGAGTGTAC-1 GTCAATCTACACCA-1 
#>             "01"            "031"             "01"           "0212"             "01" 
#> GTCAATCTGTAGCT-1 GTCAATCTTGTGGT-1 GTCACCTGCCTCCA-1 GTCACCTGTCCCGT-1 GTCATACTAATCGC-1 
#>            "031"             "01"             "01"             "01"            "041" 
#> GTCATACTGCGATT-1 GTCATACTTCGCCT-1 GTCATACTTTACCT-1 GTCATACTTTGACG-1 GTCCAAGAAAAACG-1 
#>            "032"            "032"            "031"             "01"             "01" 
#> GTCCACTGACCTCC-1 GTCCACTGGGTACT-1 GTCCAGCTACGGGA-1 GTCCCATGTGGTGT-1 GTCGAATGAAGGCG-1 
#>             "01"           "0221"             "01"           "0222"           "0222" 
#> GTCGACCTGAATGA-1 GTCGACCTGTTCAG-1 GTCGCACTTGAGAA-1 GTCTAACTGGTCTA-1 GTCTAGGAGCTTCC-1 
#>            "032"             "01"            "042"           "0221"           "0212" 
#> GTGAACACACTCTT-1 GTGAACACTCAGGT-1 GTGACCCTTAAGCC-1 GTGATGACAAGTGA-1 GTGATGACCTGAGT-1 
#>             "01"             "01"             "01"             "01"            "041" 
#> GTGATGACGGTTTG-1 GTGATTCTCATTTC-1 GTGATTCTCTCTCG-1 GTGATTCTGGTTCA-1 GTGATTCTGTCGAT-1 
#>             "01"             "01"           "0212"            "032"             "01" 
#> GTGATTCTTAGCGT-1 GTGCCACTCAGGAG-1 GTGGATTGCACTAG-1 GTGGATTGCGGAGA-1 GTGGATTGTAACGC-1 
#>            "041"             "01"           "0221"             "01"             "01" 
#> GTGTACGATCAGTG-1 GTGTAGTGGGTACT-1 GTGTATCTAGCCTA-1 GTGTATCTAGTAGA-1 GTGTATCTGTTACG-1 
#>             "01"             "01"            "041"            "031"            "042" 
#> GTGTCAGAAGCGTT-1 GTTAAAACCGAGAG-1 GTTAAATGCTCGAA-1 GTTAAATGTCGACA-1 GTTAACCTAGCTAC-1 
#>            "031"            "032"             "01"            "042"             "01" 
#> GTTAACCTTGCTTT-1 GTTAGGTGCACTCC-1 GTTAGGTGCCAGTA-1 GTTAGGTGCCCAAA-1 GTTAGGTGGAACTC-1 
#>           "0222"             "01"           "0222"           "0221"            "041" 
#> GTTAGTCTAAGAAC-1 GTTATAGAGGACAG-1 GTTATGCTTTCATC-1 GTTCAACTGGGACA-1 GTTCAACTTATGCG-1 
#>             "01"             "01"             "01"            "032"             "01" 
#> GTTGACGAGCCCTT-1 GTTGACGATATCGG-1 GTTGAGTGGTCTTT-1 GTTGAGTGTGCTTT-1 GTTGATCTGGGACA-1 
#>            "031"            "032"           "0222"             "01"             "01" 
#> GTTGATCTTTTCAC-1 GTTGGATGTTTACC-1 GTTGTACTATTCCT-1 GTTGTACTTTTGGG-1 GTTTAAGACCATGA-1 
#>            "031"           "0221"           "0222"             "01"           "0212" 
#> GTTTAAGACTGTCC-1 TAAACAACCAACCA-1 TAAACAACGAATCC-1 TAAAGACTCAGGAG-1 TAAATCGATGAGGG-1 
#>            "031"             "01"            "042"             "01"             "01" 
#> TAACAATGTGCCCT-1 TAACACCTTCGCTC-1 TAACACCTTCGTAG-1 TAACACCTTGTTTC-1 TAACATGACACTAG-1 
#>            "041"           "0212"           "0222"            "032"            "042" 
#> TAACCGGACTTACT-1 TAACGTCTCAACCA-1 TAACGTCTCATTGG-1 TAACTAGAATTTCC-1 TAACTAGACTTAGG-1 
#>             "01"           "0211"             "01"             "01"             "01" 
#> TAACTAGATCTGGA-1 TAACTCACGAGGAC-1 TAACTCACGTACAC-1 TAACTCACGTATCG-1 TAACTCACTCTACT-1 
#>             "01"           "0211"            "041"           "0212"            "032" 
#> TAAGAACTGTGTCA-1 TAAGAGGACTAAGC-1 TAAGAGGACTTGTT-1 TAAGATACGGTTCA-1 TAAGATTGCGTAGT-1 
#>           "0212"            "042"            "032"           "0211"             "01" 
#> TAAGATTGTTGCTT-1 TAAGCGTGAGGTTC-1 TAAGCGTGGACAAA-1 TAAGCGTGGGAAAT-1 TAAGCGTGTGCTCC-1 
#>             "01"           "0212"           "0222"             "01"           "0221" 
#> TAAGGCTGCCATGA-1 TAAGGCTGCTGCTC-1 TAAGGCTGTCTCGC-1 TAAGGGCTGCTGTA-1 TAAGGGCTTTACTC-1 
#>             "01"             "01"           "0222"            "031"             "01" 
#> TAAGTAACCGAGAG-1 TAAGTAACCTCCAC-1 TAAGTAACCTGTAG-1 TAAGTAACTTGTCT-1 TAATGATGAGCGGA-1 
#>            "041"            "041"             "01"             "01"             "01" 
#> TAATGCCTCATGAC-1 TAATGCCTCGTCTC-1 TAATGTGAAGATGA-1 TAATGTGACTGCAA-1 TAATGTGATTACTC-1 
#>             "01"            "032"             "01"           "0222"             "01" 
#> TACAAATGGGTACT-1 TACAATGAAAACAG-1 TACAATGACTTAGG-1 TACAATGATGCTAG-1 TACACACTCACACA-1 
#>             "01"           "0212"             "01"             "01"             "01" 
#> TACACACTCTTACT-1 TACATAGAACGCAT-1 TACATCACACGGGA-1 TACATCACCTGTTT-1 TACATCACGCTAAC-1 
#>             "01"             "01"             "01"           "0221"            "041" 
#> TACATCACTGAACC-1 TACCATTGAGGTTC-1 TACCATTGCGGGAA-1 TACCATTGGGGATG-1 TACCATTGTGAGGG-1 
#>           "0221"             "01"           "0211"           "0211"           "0212" 
#> TACCGGCTGTTGGT-1 TACGAGTGATCTCT-1 TACGAGTGATGCTG-1 TACGAGTGCGGAGA-1 TACGAGTGGTTGGT-1 
#>             "01"             "01"           "0222"             "01"             "01" 
#> TACGATCTAGTGTC-1 TACGATCTCACTGA-1 TACGATCTTACGAC-1 TACGCAGAGAATCC-1 TACGCCACATTCCT-1 
#>             "01"           "0222"            "031"            "031"             "01" 
#> TACGCCACTCCCAC-1 TACGCCACTCCGAA-1 TACGGAACGCGTTA-1 TACGGCCTGGGACA-1 TACGTACTACGGAG-1 
#>           "0221"            "042"            "041"            "032"             "01" 
#> TACGTACTCAGTTG-1 TACGTACTCCCGTT-1 TACGTTACAGAAGT-1 TACGTTACCAAGCT-1 TACTAAGAAAGGTA-1 
#>             "01"            "041"             "01"           "0211"            "041" 
#> TACTAAGAATCACG-1 TACTAAGATGATGC-1 TACTAAGATTGCGA-1 TACTACACGAGAGC-1 TACTACACTTACCT-1 
#>             "01"           "0212"             "01"             "01"            "041" 
#> TACTACTGAACCTG-1 TACTACTGATGTCG-1 TACTACTGATTCTC-1 TACTACTGTATGGC-1 TACTCAACGGTCTA-1 
#>           "0212"            "032"             "01"             "01"           "0212" 
#> TACTCAACTGCTAG-1 TACTCCCTCAGTTG-1 TACTCTGAATCGAC-1 TACTCTGACGAGTT-1 TACTCTGATTGACG-1 
#>            "042"             "01"            "032"             "01"            "042" 
#> TACTGGGATCGATG-1 TACTGTTGAAAGCA-1 TACTGTTGAGGCGA-1 TACTGTTGCTGAAC-1 TACTTGACTCCTCG-1 
#>             "01"             "01"            "032"            "042"            "031" 
#> TACTTGACTGGTGT-1 TACTTTCTTTTGGG-1 TAGAAACTAATCGC-1 TAGAAACTGCTTCC-1 TAGAAACTGGGATG-1 
#>            "041"             "01"             "01"           "0212"            "032" 
#> TAGAATTGCGACAT-1 TAGAATTGTATCGG-1 TAGACGTGCTTGAG-1 TAGACGTGTCGCTC-1 TAGAGCACCTTACT-1 
#>             "01"             "01"             "01"             "01"            "041" 
#> TAGATTGACTTGTT-1 TAGATTGAGGCATT-1 TAGCATCTCAGCTA-1 TAGCATCTCCCTCA-1 TAGCATCTGCTGTA-1 
#>            "041"             "01"            "032"             "01"           "0221" 
#> TAGCATCTGGGACA-1 TAGCATCTTGTCGA-1 TAGCCCACAAAAGC-1 TAGCCCACAGCCAT-1 TAGCCCACAGCTAC-1 
#>             "01"             "01"             "01"            "031"            "032" 
#> TAGCCCACCCACAA-1 TAGCCCTGCGGAGA-1 TAGCCGCTTACGAC-1 TAGCCGCTTACTTC-1 TAGCCGCTTTCCAT-1 
#>             "01"             "01"             "01"            "031"           "0222" 
#> TAGCTACTGAATAG-1 TAGCTACTGTAGCT-1 TAGCTACTTTTGCT-1 TAGGACTGTGCTGA-1 TAGGAGCTAAGGCG-1 
#>            "041"             "01"             "01"             "01"            "041" 
#> TAGGAGCTGAGGGT-1 TAGGAGCTTGCATG-1 TAGGCAACCGTCTC-1 TAGGCATGCTCTCG-1 TAGGCATGGCGAGA-1 
#>             "01"            "041"            "041"            "032"            "031" 
#> TAGGCTGATGCCTC-1 TAGGGACTGAACTC-1 TAGGTCGACACTGA-1 TAGGTCGAGGATCT-1 TAGGTGACACACTG-1 
#>           "0212"            "032"             "01"            "041"             "01" 
#> TAGGTGACACGTTG-1 TAGGTGTGTTCTGT-1 TAGGTTCTGAAGGC-1 TAGGTTCTTCTTAC-1 TAGGTTCTTGCTGA-1 
#>            "041"            "031"             "01"           "0221"           "0212" 
#> TAGTAAACCTCGCT-1 TAGTAAACGTCACA-1 TAGTAATGAGATCC-1 TAGTACCTAAGAAC-1 TAGTATGATCTTAC-1 
#>             "01"             "01"             "01"           "0212"            "041" 
#> TAGTATGATTCTCA-1 TAGTCTTGGCTGTA-1 TAGTCTTGGGACTT-1 TAGTCTTGTGGAAA-1 TAGTGGTGAAGTGA-1 
#>             "01"             "01"             "01"            "031"            "032" 
#> TAGTTAGAACCACA-1 TAGTTAGATGAACC-1 TATAAGACAACAGA-1 TATAAGACAGCTCA-1 TATAAGTGACACCA-1 
#>            "032"             "01"             "01"           "0221"           "0221" 
#> TATAAGTGTATCGG-1 TATAAGTGTGGTGT-1 TATACAGAACCCTC-1 TATACAGAAGAACA-1 TATACAGATCCAGA-1 
#>           "0211"           "0221"             "01"             "01"             "01" 
#> TATACCACCTGATG-1 TATACGCTACCAAC-1 TATAGATGGACGGA-1 TATAGATGTTCCGC-1 TATCCAACCAGCTA-1 
#>            "041"             "01"             "01"           "0221"           "0211" 
#> TATCCAACTCTCTA-1 TATCGACTACTAGC-1 TATCGACTCGATAC-1 TATCGTACAGATGA-1 TATCGTACATTCCT-1 
#>            "031"             "01"           "0221"             "01"           "0212" 
#> TATCTCGAGAGATA-1 TATCTGACAGGTTC-1 TATCTGACTGTTTC-1 TATCTTCTAAACAG-1 TATGAATGGAGGAC-1 
#>             "01"            "031"             "01"             "01"            "032" 
#> TATGAATGTTTGCT-1 TATGCGGATAACCG-1 TATGGGTGCATCAG-1 TATGGGTGCTAGCA-1 TATGGTCTCTACCC-1 
#>           "0221"             "01"            "032"            "042"             "01" 
#> TATGTCACGGAACG-1 TATGTCACTAACCG-1 TATGTCACTTCTCA-1 TATGTGCTCCGATA-1 TATGTGCTGGATTC-1 
#>            "042"           "0222"            "042"           "0212"             "01" 
#> TATTGCTGAAGAAC-1 TATTGCTGCCGTTC-1 TATTGCTGTCTGGA-1 TATTGCTGTGCACA-1 TATTTCCTATTGGC-1 
#>           "0211"            "041"             "01"             "01"           "0211" 
#> TATTTCCTGGAGGT-1 TATTTCCTGGTGTT-1 TCAACACTGTTTGG-1 TCAAGGACAGCGTT-1 TCAAGGACATTCTC-1 
#>            "032"             "01"            "032"             "01"            "031" 
#> TCAAGGACGGTGTT-1 TCAATCACACTCTT-1 TCAATCACAGTCGT-1 TCACAACTATGTGC-1 TCACAACTTTGCTT-1 
#>           "0212"            "031"           "0221"             "01"           "0211" 
#> TCACATACACTTTC-1 TCACATACAGGGTG-1 TCACCCGAGACGGA-1 TCACCGTGCTCGCT-1 TCACCTCTACGACT-1 
#>             "01"             "01"           "0222"           "0221"            "031" 
#> TCACCTCTTCCAAG-1 TCACGAGAGGAGGT-1 TCACTATGGGGCAA-1 TCACTATGGTTGTG-1 TCAGACGACGCTAA-1 
#>           "0221"            "042"            "031"            "041"             "01" 
#> TCAGACGACGTTAG-1 TCAGAGACTCCAGA-1 TCAGCAGACTCCAC-1 TCAGCGCTCTAGTG-1 TCAGCGCTGGATCT-1 
#>            "032"             "01"             "01"             "01"            "041" 
#> TCAGCGCTGGTATC-1 TCAGGATGAAGTAG-1 TCAGGATGCCTTTA-1 TCAGTGGAAGATCC-1 TCAGTTACCTACGA-1 
#>             "01"             "01"           "0221"            "031"           "0212" 
#> TCAGTTACTAGAAG-1 TCATCAACCCGATA-1 TCATCAACTGTTCT-1 TCATCATGCAGTTG-1 TCATCCCTTACTGG-1 
#>             "01"             "01"           "0222"             "01"             "01" 
#> TCATTCGATACAGC-1 TCCACGTGGAAACA-1 TCCACTCTACACTG-1 TCCACTCTGAGCTT-1 TCCACTCTTACTTC-1 
#>           "0221"             "01"             "01"           "0212"            "041" 
#> TCCATAACAAAGTG-1 TCCATAACCGTAGT-1 TCCATAACGATGAA-1 TCCATAACTACGCA-1 TCCATCCTCCCTAC-1 
#>             "01"            "042"             "01"             "01"            "031" 
#> TCCCACGATCATTC-1 TCCCATCTCAAAGA-1 TCCCGAACACAGTC-1 TCCCGAACTTCGCC-1 TCCCGATGAGATCC-1 
#>             "01"           "0212"            "032"           "0221"             "01" 
#> TCCCGATGCCTGAA-1 TCCCTACTCAACTG-1 TCCGAAGACAATCG-1 TCCGAAGACGTTAG-1 TCCGGACTGAGGTG-1 
#>           "0211"            "041"           "0211"             "01"             "01" 
#> TCCGGACTGTACGT-1 TCCTAAACATCGAC-1 TCCTAAACCGAGAG-1 TCCTAAACCGCATA-1 TCCTAATGGTTTGG-1 
#>             "01"             "01"             "01"            "032"            "031" 
#> TCCTACCTGTCGTA-1 TCCTATGAAAAGCA-1 TCGAATCTCTGGTA-1 TCGACCTGCCGATA-1 TCGACGCTTCTATC-1 
#>             "01"            "031"            "031"           "0221"           "0212" 
#> TCGACGCTTTGACG-1 TCGAGAACGACAGG-1 TCGAGAACGTTAGC-1 TCGAGCCTATCAGC-1 TCGAGCCTGCGAGA-1 
#>             "01"             "01"            "031"            "041"             "01" 
#> TCGAGCCTTGTGAC-1 TCGATACTATTCCT-1 TCGATACTTGCACA-1 TCGATTTGATGCCA-1 TCGATTTGCACTCC-1 
#>             "01"             "01"             "01"           "0212"             "01" 
#> TCGATTTGCAGCTA-1 TCGATTTGCCTACC-1 TCGATTTGTCGTGA-1 TCGCAGCTAGATCC-1 TCGCCATGAGACTC-1 
#>            "032"           "0212"            "042"             "01"             "01" 
#> TCGCCATGTGGTCA-1 TCGGACCTAACAGA-1 TCGGACCTATAAGG-1 TCGGACCTGTACAC-1 TCGGTAGAGTAGGG-1 
#>            "041"             "01"            "041"             "01"             "01" 
#> TCGGTAGATCCCAC-1 TCGTAGGATCGACA-1 TCGTTATGGACAAA-1 TCTAACACCAGTTG-1 TCTAACACGAGCAG-1 
#>            "041"             "01"             "01"            "032"           "0222" 
#> TCTAACTGAACCAC-1 TCTAAGCTAATGCC-1 TCTAAGCTTAGTCG-1 TCTAAGCTTCTAGG-1 TCTAAGCTTGTTCT-1 
#>             "01"             "01"            "031"           "0221"           "0212" 
#> TCTAAGCTTTCGCC-1 TCTACAACGACTAC-1 TCTAGACTTAGAAG-1 TCTAGTTGCACCAA-1 TCTATGTGAAGAGT-1 
#>            "041"           "0222"           "0211"           "0222"           "0211" 
#> TCTATGTGAGTCTG-1 TCTCAAACCTAAGC-1 TCTCTAGAATTTCC-1 TCTGATACACGTGT-1 TCTGATACTCGCCT-1 
#>             "01"            "041"             "01"             "01"             "01" 
#> TCTTACGAACCTGA-1 TCTTCAGAGCTACA-1 TCTTGATGCGGAGA-1 TGAAATTGGTGAGG-1 TGAACCGAAAACGA-1 
#>           "0212"           "0222"             "01"           "0212"             "01" 
#> TGAACCGACTACTT-1 TGAACCGATTCGGA-1 TGAAGCACTCACGA-1 TGAAGCTGAACGAA-1 TGAAGCTGCATGGT-1 
#>           "0221"           "0221"             "01"             "01"            "042" 
#> TGAAGCTGCGTAAC-1 TGAATAACCACTTT-1 TGAATAACTCCCAC-1 TGACACGACCTTAT-1 TGACCAGACAACCA-1 
#>             "01"             "01"            "032"            "041"             "01" 
#> TGACCAGAGGATTC-1 TGACCGCTAAAAGC-1 TGACCGCTCTGCAA-1 TGACGATGCAAAGA-1 TGACGCCTGTACCA-1 
#>             "01"             "01"             "01"           "0212"             "01" 
#> TGACGCCTTTACTC-1 TGACTGGAAGAGAT-1 TGACTGGACCGTAA-1 TGACTGGACGCAAT-1 TGACTGGAGGACAG-1 
#>            "031"           "0211"             "01"             "01"            "042" 
#> TGACTGGATTCTCA-1 TGACTTACACACCA-1 TGACTTACAGTCTG-1 TGACTTTGCGCATA-1 TGACTTTGTTTGTC-1 
#>             "01"             "01"           "0222"             "01"             "01" 
#> TGAGACACAAGGTA-1 TGAGACACTCAAGC-1 TGAGCTGAATGCTG-1 TGAGCTGACTGGAT-1 TGAGCTGATGCTAG-1 
#>             "01"             "01"           "0221"           "0212"           "0211" 
#> TGAGGACTCTCATT-1 TGAGGACTTCATTC-1 TGAGGTACGAACCT-1 TGAGTCGAGTTACG-1 TGAGTGACTGAGCT-1 
#>           "0212"             "01"           "0221"            "041"             "01" 
#> TGATAAACGAATCC-1 TGATAAACTCCGTC-1 TGATAAACTTTCAC-1 TGATACCTCACTAG-1 TGATACCTGTTGGT-1 
#>             "01"            "032"             "01"           "0212"             "01" 
#> TGATACCTTATGCG-1 TGATACCTTGAAGA-1 TGATATGAACCTTT-1 TGATCACTAGCATC-1 TGATCACTCTCGCT-1 
#>             "01"             "01"             "01"            "031"             "01" 
#> TGATCACTTCTACT-1 TGATCGGACTGACA-1 TGATCGGAGGAGCA-1 TGATCGGATATGCG-1 TGATTAGACATTGG-1 
#>            "041"           "0221"            "041"           "0221"             "01" 
#> TGATTAGATGACTG-1 TGATTAGATGCTAG-1 TGATTCACTATGCG-1 TGATTCACTGTCAG-1 TGATTCTGCCGAAT-1 
#>            "041"             "01"             "01"            "042"             "01" 
#> TGATTCTGCTCTTA-1 TGCAAGTGAGAACA-1 TGCAAGTGGGTAGG-1 TGCAATCTTCAGGT-1 TGCACAGACGACAT-1 
#>             "01"             "01"           "0212"           "0222"            "032" 
#> TGCCAAGAGCAGTT-1 TGCCAAGATCTCTA-1 TGCCACTGAACGTC-1 TGCCACTGCGATAC-1 TGCCAGCTTGGCAT-1 
#>           "0212"             "01"             "01"            "032"             "01" 
#> TGCCCAACAGCAAA-1 TGCCCAACCGCATA-1 TGCCGACTCTCCCA-1 TGCGAAACAGTCAC-1 TGCGAAACGTTGCA-1 
#>             "01"           "0221"            "041"            "042"            "041" 
#> TGCGATGAACGGTT-1 TGCGATGACCTCGT-1 TGCGATGACTAGTG-1 TGCGATGACTGCTC-1 TGCGATGACTTGCC-1 
#>             "01"             "01"            "042"            "041"            "042" 
#> TGCGATGAGTGCTA-1 TGCGCACTCTTGAG-1 TGCGTAGAATAAGG-1 TGCGTAGACGGGAA-1 TGCGTAGATGGTCA-1 
#>           "0211"           "0211"           "0211"            "041"           "0221" 
#> TGCTAGGAAACCGT-1 TGCTAGGATAGTCG-1 TGCTATACGGTTCA-1 TGCTATACTGCTGA-1 TGCTGAGAGAGCAG-1 
#>            "031"             "01"           "0212"            "031"            "032" 
#> TGCTGAGATTATCC-1 TGGAAAGACTCTCG-1 TGGAAAGAGCGATT-1 TGGAAAGAGGTCAT-1 TGGAAAGATATGGC-1 
#>             "01"            "041"             "01"           "0221"             "01" 
#> TGGAACACAAACAG-1 TGGAACACGCTAAC-1 TGGAAGCTCAGATC-1 TGGACCCTACACTG-1 TGGACCCTCATGGT-1 
#>            "032"             "01"             "01"           "0211"             "01" 
#> TGGACCCTGGTACT-1 TGGACTGAGTATGC-1 TGGAGACTATCAGC-1 TGGAGACTTCAAGC-1 TGGAGACTTGACCA-1 
#>           "0222"             "01"           "0212"             "01"            "031" 
#> TGGAGGGACGGAGA-1 TGGAGGGAGCTATG-1 TGGATCGATAAAGG-1 TGGATGTGACCTAG-1 TGGATGTGTGAAGA-1 
#>           "0211"             "01"             "01"            "041"            "042" 
#> TGGATTCTCATACG-1 TGGCAATGCTTGTT-1 TGGCACCTTCACGA-1 TGGCACCTTCAGTG-1 TGGGTATGAAGAGT-1 
#>             "01"            "042"             "01"           "0222"             "01" 
#> TGGGTATGCACAAC-1 TGGGTATGGTACGT-1 TGGGTATGTTTGGG-1 TGGTAGACATGCCA-1 TGGTAGACCCTCAC-1 
#>             "01"            "041"           "0211"             "01"            "032" 
#> TGGTAGACCTGATG-1 TGGTAGTGCACTGA-1 TGGTATCTAAACAG-1 TGGTATCTCTTCCG-1 TGGTCAGACCCAAA-1 
#>             "01"           "0211"             "01"             "01"             "01" 
#> TGGTTACTGACGTT-1 TGGTTACTGTTCTT-1 TGTAACCTAGAGGC-1 TGTAACCTTGCCTC-1 TGTAATGACACAAC-1 
#>           "0212"             "01"             "01"           "0222"            "032" 
#> TGTAATGAGGTAAA-1 TGTACTTGCTCTAT-1 TGTAGGTGCGAGAG-1 TGTAGGTGCTATGG-1 TGTAGGTGCTCTAT-1 
#>            "032"           "0221"            "041"             "01"           "0222" 
#> TGTAGGTGTGCTGA-1 TGTAGTCTTCCAGA-1 TGTAGTCTTGCACA-1 TGTATCTGTTAGGC-1 TGTATGCTCATGGT-1 
#>             "01"             "01"            "031"             "01"            "041" 
#> TGTATGCTGTAGGG-1 TGTATGCTTTCATC-1 TGTCAGGAATACCG-1 TGTCAGGAGATGAA-1 TGTCTAACCCCTTG-1 
#>             "01"             "01"             "01"           "0221"             "01" 
#> TGTGACGATTCTCA-1 TGTGAGACTGTCAG-1 TGTGAGACTTGAGC-1 TGTGAGTGACCACA-1 TGTGAGTGAGTGCT-1 
#>            "031"           "0221"             "01"             "01"           "0221" 
#> TGTGAGTGGAGATA-1 TGTGATCTCTCTAT-1 TGTGATCTGACACT-1 TGTGGATGGCCAAT-1 TGTTAAGACAAAGA-1 
#>            "031"            "042"             "01"            "041"           "0211" 
#> TGTTAAGATAAGGA-1 TGTTACACCGCATA-1 TGTTACACGACTAC-1 TGTTACTGGCTACA-1 TGTTACTGTAGTCG-1 
#>           "0211"           "0221"           "0211"            "031"            "031" 
#> TTAACCACCGTAAC-1 TTAACCACTAAGGA-1 TTAACCACTCAGAC-1 TTACACACGTGTTG-1 TTACACACTCCTAT-1 
#>             "01"            "031"             "01"             "01"             "01" 
#> TTACCATGAATCGC-1 TTACCATGGTTGAC-1 TTACCATGTGTCTT-1 TTACCATGTTGTGG-1 TTACGACTGAGAGC-1 
#>           "0211"             "01"            "031"            "041"             "01" 
#> TTACGACTTGACAC-1 TTACGTACGTTCAG-1 TTACTCGAAGAATG-1 TTACTCGACGCAAT-1 TTACTCGAGGGTGA-1 
#>           "0212"            "032"           "0212"           "0222"             "01" 
#> TTACTCGATCTACT-1 TTAGAATGTGGTGT-1 TTAGAATGTGTAGC-1 TTAGACCTCCTACC-1 TTAGACCTCCTTTA-1 
#>            "032"             "01"             "01"             "01"           "0212" 
#> TTAGCTACAACCGT-1 TTAGCTACTGTCCC-1 TTAGCTACTTTCGT-1 TTAGGGACGCGAAG-1 TTAGGGTGCTGGAT-1 
#>             "01"           "0222"             "01"             "01"            "042" 
#> TTAGGGTGTCCTGC-1 TTAGGTCTACTTTC-1 TTAGTCACCAGTTG-1 TTAGTCTGAAAGCA-1 TTAGTCTGCCAACA-1 
#>           "0222"           "0211"             "01"            "042"            "032" 
#> TTAGTCTGTGCACA-1 TTATCCGACTAGTG-1 TTATCCGAGAAAGT-1 TTATGAGAGATAAG-1 TTATGCACGTCACA-1 
#>             "01"            "041"           "0222"             "01"            "041" 
#> TTATGGCTTATGGC-1 TTATTCCTATGCTG-1 TTATTCCTGGACAG-1 TTATTCCTGGTACT-1 TTATTCCTTCGTGA-1 
#>           "0222"           "0222"            "042"            "041"             "01" 
#> TTCAAAGATAAAGG-1 TTCAACACAACAGA-1 TTCAACACCCCAAA-1 TTCAACACGGACGA-1 TTCAAGCTAAGAAC-1 
#>             "01"             "01"           "0212"           "0221"           "0212" 
#> TTCAAGCTAGATGA-1 TTCAAGCTGTTGAC-1 TTCAAGCTTGATGC-1 TTCAAGCTTTCGCC-1 TTCACAACCCGTTC-1 
#>             "01"             "01"             "01"             "01"           "0222" 
#> TTCACAACGTCTGA-1 TTCAGACTACCCAA-1 TTCAGACTCTCGAA-1 TTCAGTACCGACTA-1 TTCAGTACTCAAGC-1 
#>           "0211"             "01"             "01"             "01"             "01" 
#> TTCAGTACTCCTAT-1 TTCAGTTGCCAAGT-1 TTCAGTTGTCCTTA-1 TTCAGTTGTCTAGG-1 TTCAGTTGTCTCGC-1 
#>           "0211"             "01"           "0212"             "01"            "041" 
#> TTCATCGAGGTGGA-1 TTCATGTGTGGTGT-1 TTCATTCTATGTCG-1 TTCATTCTTCTCTA-1 TTCCAAACCTATGG-1 
#>           "0212"             "01"           "0212"             "01"           "0211" 
#> TTCCAAACCTCCCA-1 TTCCAAACTCCCAC-1 TTCCAAACTTGACG-1 TTCCATGACGAGAG-1 TTCCATGACTGTCC-1 
#>            "042"            "032"            "031"           "0212"             "01" 
#> TTCCCACTTGAGGG-1 TTCCCACTTGTCTT-1 TTCCTAGAAAGTGA-1 TTCCTAGACTAGTG-1 TTCGAGGACTCTAT-1 
#>            "032"           "0212"             "01"           "0221"             "01" 
#> TTCGAGGAGGGCAA-1 TTCGAGGATAGAAG-1 TTCGATTGAGCATC-1 TTCGGAGAATGCCA-1 TTCGGAGATGTGCA-1 
#>             "01"           "0221"             "01"           "0211"             "01" 
#> TTCGTATGAAAAGC-1 TTCGTATGGATAGA-1 TTCGTATGGTCTGA-1 TTCGTATGTCCTTA-1 TTCTACGAACGTAC-1 
#>            "031"            "031"             "01"           "0222"             "01" 
#> TTCTACGAGTTGGT-1 TTCTAGTGACACGT-1 TTCTAGTGCATGAC-1 TTCTAGTGGAGAGC-1 TTCTAGTGGTCACA-1 
#>             "01"             "01"           "0212"            "032"           "0222" 
#> TTCTCAGAAGAGAT-1 TTCTCAGAAGCATC-1 TTCTCAGATGGAGG-1 TTCTGATGGAGACG-1 TTCTTACTCTGGAT-1 
#>             "01"            "042"             "01"            "032"           "0221" 
#> TTGAACCTCCTTGC-1 TTGAATGAACTACG-1 TTGAATGACTTACT-1 TTGAATGATCTCAT-1 TTGACACTCTGTAG-1 
#>            "041"           "0221"             "01"            "042"             "01" 
#> TTGACACTGATAAG-1 TTGAGGACAGAACA-1 TTGAGGACTACGCA-1 TTGAGGTGGACGGA-1 TTGCATTGAGCTAC-1 
#>            "041"           "0212"           "0222"             "01"             "01" 
#> TTGCATTGCTAAGC-1 TTGCATTGTGACTG-1 TTGCTAACACCAAC-1 TTGCTAACACGCTA-1 TTGCTAACCACTCC-1 
#>           "0212"             "01"             "01"           "0221"             "01" 
#> TTGCTATGGTACGT-1 TTGCTATGGTAGGG-1 TTGGAGACCAATCG-1 TTGGAGACGCTATG-1 TTGGAGACTATGGC-1 
#>           "0222"           "0221"             "01"           "0212"            "041" 
#> TTGGGAACTGAACC-1 TTGGTACTACTGGT-1 TTGGTACTCTTAGG-1 TTGGTACTGAATCC-1 TTGGTACTGGATTC-1 
#>             "01"           "0222"             "01"            "041"            "042" 
#> TTGTACACGTTGTG-1 TTGTACACTTGCAG-1 TTGTAGCTAGCTCA-1 TTGTAGCTCTCTTA-1 TTGTCATGGACGGA-1 
#>            "041"             "01"             "01"            "042"            "032" 
#> TTTAGAGATCCTCG-1 TTTAGCTGATACCG-1 TTTAGCTGGATACC-1 TTTAGCTGTACTCT-1 TTTAGGCTCCTTTA-1 
#>            "042"             "01"           "0212"           "0212"           "0211" 
#> TTTATCCTGTTGTG-1 TTTCACGAGGTTCA-1 TTTCAGTGGAAGGC-1 TTTCAGTGTCACGA-1 TTTCAGTGTCTATC-1 
#>           "0222"             "01"             "01"            "041"           "0211" 
#> TTTCAGTGTGCAGT-1 TTTCCAGAGGTGAG-1 TTTCGAACACCTGA-1 TTTCGAACTCTCAT-1 TTTCTACTGAGGCA-1 
#>            "041"             "01"            "042"           "0212"            "042" 
#> TTTCTACTTCCTCG-1 TTTGCATGAGAGGC-1 TTTGCATGCCTCAC-1 
#>            "041"            "041"             "01"

show/hide code output

get_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 131))
#> AAACATACAACCAC-1 AAACATTGAGCTAC-1 AAACATTGATCAGC-1 AAACCGTGCTTCCG-1 AAACCGTGTATGCG-1 
#>             "01"             "04"             "01"           "0222"            "032" 
#> AAACGCACTGGTAC-1 AAACGCTGACCAGT-1 AAACGCTGGTTCTT-1 AAACGCTGTAGCCA-1 AAACGCTGTTTCTG-1 
#>             "01"             "01"             "01"            "031"           "0211" 
#> AAACTTGAAAAACG-1 AAACTTGATCCAGA-1 AAAGAGACGAGATA-1 AAAGAGACGCGAGA-1 AAAGAGACGGACTT-1 
#>             "04"             "01"             "01"           "0212"             "01" 
#> AAAGAGACGGCATT-1 AAAGCAGATATCGG-1 AAAGCCTGTATGCG-1 AAAGGCCTGTCTAG-1 AAAGTTTGATCACG-1 
#>             "01"           "0222"             "01"             "04"             "04" 
#> AAAGTTTGGGGTGA-1 AAAGTTTGTAGAGA-1 AAAGTTTGTAGCGT-1 AAATCAACAATGCC-1 AAATCAACACCAGT-1 
#>             "04"             "01"           "0212"             "04"             "01" 
#> AAATCAACCAGGAG-1 AAATCAACCCTATT-1 AAATCAACGGAAGC-1 AAATCAACTCGCAA-1 AAATCATGACCACA-1 
#>             "01"           "0222"             "01"             "01"           "0221" 
#> AAATCCCTCCACAA-1 AAATCCCTGCTATG-1 AAATGTTGAACGAA-1 AAATGTTGCCACAA-1 AAATGTTGTGGCAT-1 
#>             "01"             "04"           "0212"            "031"           "0222" 
#> AAATTCGAAGGTTC-1 AAATTCGAATCACG-1 AAATTCGAGCTGAT-1 AAATTCGAGGAGTG-1 AAATTCGATTCTCA-1 
#>             "01"           "0212"           "0221"             "01"            "031" 
#> AAATTGACACGACT-1 AAATTGACTCGCTC-1 AACAAACTCATTTC-1 AACAAACTTTCGTT-1 AACAATACGACGAG-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> AACACGTGCAGAGG-1 AACACGTGGAAAGT-1 AACACGTGGAACCT-1 AACACGTGGCTACA-1 AACACGTGTACGAC-1 
#>             "01"             "01"           "0212"             "01"           "0221" 
#> AACAGCACAAGAGT-1 AACATTGATGGGAG-1 AACCAGTGATACCG-1 AACCCAGATCGCTC-1 AACCGATGCTCCCA-1 
#>           "0211"           "0221"           "0221"             "01"             "01" 
#> AACCGATGGTCATG-1 AACCGATGTTCTAC-1 AACCGCCTAGCGTT-1 AACCGCCTCTACGA-1 AACCTACTGTGAGG-1 
#>             "04"           "0212"             "01"           "0222"           "0222" 
#> AACCTACTGTGTTG-1 AACCTTACGAGACG-1 AACCTTACGCGAGA-1 AACCTTACTAACGC-1 AACCTTTGGACGGA-1 
#>             "01"             "01"            "032"           "0221"             "01" 
#> AACCTTTGTACGCA-1 AACGCAACAAGTAG-1 AACGCATGACCCAA-1 AACGCATGCCTTCG-1 AACGCATGTACTTC-1 
#>           "0221"             "01"             "01"             "01"             "01" 
#> AACGCCCTCGGGAA-1 AACGCCCTCGTACA-1 AACGCCCTGGCATT-1 AACGTCGAGTATCG-1 AACGTGTGAAAGCA-1 
#>             "01"            "032"            "031"            "032"             "01" 
#> AACGTGTGGCGGAA-1 AACGTGTGTCCAAG-1 AACGTGTGTGCTTT-1 AACTACCTTAGAGA-1 AACTCACTCAAGCT-1 
#>             "04"             "01"             "01"             "01"           "0212" 
#> AACTCACTTGGAGG-1 AACTCGGAAAGTGA-1 AACTCGGAAGGTCT-1 AACTCTTGCAGGAG-1 AACTGTCTCCCTTG-1 
#>           "0212"            "031"           "0211"             "01"           "0212" 
#> AACTTGCTACGCTA-1 AACTTGCTGGGACA-1 AAGAACGAGTGTTG-1 AAGAAGACGTAGGG-1 AAGACAGAAGTCTG-1 
#>             "04"             "01"             "01"             "04"             "04" 
#> AAGACAGAGGATCT-1 AAGACAGATTACCT-1 AAGAGATGGGTAGG-1 AAGATGGAAAACAG-1 AAGATGGAGAACTC-1 
#>             "01"           "0212"             "04"             "04"           "0222" 
#> AAGATGGAGATAAG-1 AAGATTACAACCTG-1 AAGATTACAGATCC-1 AAGATTACCCGTTC-1 AAGATTACCGCCTT-1 
#>           "0222"             "01"           "0222"           "0212"           "0212" 
#> AAGATTACCTCAAG-1 AAGATTACTCCTCG-1 AAGCAAGAGCGAGA-1 AAGCAAGAGCTTAG-1 AAGCAAGAGGTGTT-1 
#>            "032"           "0211"             "01"            "031"            "032" 
#> AAGCACTGAGCAAA-1 AAGCACTGCATACG-1 AAGCACTGGTTCTT-1 AAGCCAACGTGTTG-1 AAGCCATGAACTGC-1 
#>             "04"             "01"             "04"             "01"           "0222" 
#> AAGCCATGACACGT-1 AAGCCATGCGTGAT-1 AAGCCATGTCTCGC-1 AAGCCTGACATGCA-1 AAGCCTGACCGAAT-1 
#>           "0211"             "01"             "01"             "01"           "0211" 
#> AAGCGACTCCTCAC-1 AAGCGACTGTGTCA-1 AAGCGACTTACAGC-1 AAGCGACTTTGACG-1 AAGCGTACGTCTTT-1 
#>           "0222"             "01"             "04"           "0221"             "01" 
#> AAGGCTTGCGAACT-1 AAGGTCACGGTTAC-1 AAGGTCACTGTTTC-1 AAGGTCACTTCCCG-1 AAGGTCTGACAGTC-1 
#>            "031"           "0211"             "04"             "01"             "01" 
#> AAGGTCTGCAGATC-1 AAGTAACTCTGAAC-1 AAGTAACTGAGATA-1 AAGTAGGATACAGC-1 AAGTATACCGAACT-1 
#>             "01"           "0212"             "04"            "032"             "01" 
#> AAGTCCGACTTGTT-1 AAGTCCGATAGAAG-1 AAGTCTCTAGTCGT-1 AAGTCTCTCGGAGA-1 AAGTGGCTTGGAGG-1 
#>             "01"             "01"             "01"            "031"             "04" 
#> AAGTTCCTCATTCT-1 AAGTTCCTTCTTAC-1 AATAAGCTCGAATC-1 AATAAGCTCGTTGA-1 AATACCCTGGACGA-1 
#>           "0221"             "01"             "01"             "01"             "04" 
#> AATACCCTGGCATT-1 AATACTGAAAGGGC-1 AATACTGAATTGGC-1 AATAGGGAACCCTC-1 AATAGGGAGAATGA-1 
#>             "01"            "031"            "032"             "04"            "031" 
#> AATCAAACTATCGG-1 AATCCGGAATGCTG-1 AATCCTACCGGTAT-1 AATCCTTGACGGGA-1 AATCCTTGGTGAGG-1 
#>             "01"             "04"             "01"           "0212"            "032" 
#> AATCGGTGGAACTC-1 AATCGGTGTGCTTT-1 AATCTAGAAAAGTG-1 AATCTAGAATCGGT-1 AATCTCACAGCCTA-1 
#>            "031"             "01"             "01"             "01"           "0222" 
#> AATCTCACTCTAGG-1 AATCTCTGAACAGA-1 AATCTCTGCTTTAC-1 AATGATACACCAAC-1 AATGATACGGTCAT-1 
#>             "01"             "01"            "032"            "031"           "0222" 
#> AATGCGTGACACCA-1 AATGCGTGGACGGA-1 AATGCGTGGCTATG-1 AATGGAGAATCGTG-1 AATGGAGATCCTTA-1 
#>             "04"           "0212"             "04"           "0212"             "01" 
#> AATGGCTGACACCA-1 AATGGCTGCGTGAT-1 AATGGCTGTAAAGG-1 AATGGCTGTACTCT-1 AATGGCTGTGAAGA-1 
#>             "04"             "01"            "031"            "031"             "01" 
#> AATGTAACGGTGGA-1 AATGTCCTCTTCTA-1 AATGTTGACAGTCA-1 AATGTTGAGTTGAC-1 AATGTTGATCTACT-1 
#>             "01"             "01"             "01"           "0212"             "01" 
#> AATTACGAATTCCT-1 AATTACGACTTCTA-1 AATTACGAGTGAGG-1 AATTACGATTGGCA-1 AATTCCTGCTCAGA-1 
#>           "0222"             "01"             "01"             "04"             "04" 
#> AATTGATGTCGCAA-1 AATTGTGACTTGGA-1 ACAAAGGAGGGTGA-1 ACAAATTGATTCTC-1 ACAAATTGCTCAGA-1 
#>           "0221"             "04"             "01"           "0221"           "0211" 
#> ACAAATTGTTGCGA-1 ACAACCGAGGGATG-1 ACAACCGAGTTACG-1 ACAAGAGAAGTCGT-1 ACAAGAGACTTATC-1 
#>            "032"            "031"             "01"           "0222"             "01" 
#> ACAAGAGAGTTGAC-1 ACAATCCTAACCGT-1 ACAATCCTTAGCGT-1 ACAATTGACTGACA-1 ACAATTGATGACTG-1 
#>             "04"             "01"             "04"            "031"            "032" 
#> ACACAGACCATACG-1 ACACCAGAGGGCAA-1 ACACCCTGGTGTTG-1 ACACGAACAGTTCG-1 ACACGATGACGCAT-1 
#>            "031"             "01"            "032"             "01"            "031" 
#> ACACGATGATGTGC-1 ACACGATGTCGTAG-1 ACACGATGTGGTCA-1 ACAGACACGGCATT-1 ACAGACACGTTGTG-1 
#>           "0212"             "01"             "01"            "031"             "01" 
#> ACAGCAACACCTAG-1 ACAGCAACCTCAAG-1 ACAGGTACCCCACT-1 ACAGGTACGCTGTA-1 ACAGGTACTGGTGT-1 
#>           "0211"           "0221"             "01"             "01"            "032" 
#> ACAGTCGACCCAAA-1 ACAGTCGACCGATA-1 ACAGTGACTCACCC-1 ACAGTGACTCTATC-1 ACAGTGTGGTCACA-1 
#>             "01"            "031"             "01"             "01"             "01" 
#> ACAGTGTGTTGCGA-1 ACATCACTCTACTT-1 ACATGGTGAAGCCT-1 ACATGGTGCAACCA-1 ACATGGTGCGAGTT-1 
#>           "0212"           "0212"             "01"             "04"             "01" 
#> ACATTCTGGCATAC-1 ACATTCTGGGAACG-1 ACCAACGACATGCA-1 ACCACAGAAAGTAG-1 ACCACAGAGTTGGT-1 
#>             "01"           "0212"             "01"             "01"             "01" 
#> ACCACCTGTGTGCA-1 ACCACGCTACAGCT-1 ACCACGCTACCCAA-1 ACCACGCTGCGAGA-1 ACCACGCTGCTGTA-1 
#>             "01"             "01"            "031"             "01"             "01" 
#> ACCAGCCTGACAGG-1 ACCAGTGAACGGTT-1 ACCAGTGAATACCG-1 ACCAGTGAGGGATG-1 ACCAGTGATGACTG-1 
#>             "01"             "04"           "0221"             "01"           "0211" 
#> ACCATTACCTTCTA-1 ACCATTACGAGATA-1 ACCATTTGTCATTC-1 ACCCAAGAACTGTG-1 ACCCAAGAATTCCT-1 
#>             "01"            "031"             "01"            "031"           "0221" 
#> ACCCAAGAGGACAG-1 ACCCAAGATTCACT-1 ACCCACTGCGCCTT-1 ACCCACTGGACAGG-1 ACCCACTGGTTCAG-1 
#>             "01"             "04"           "0211"             "01"            "032" 
#> ACCCACTGTCGTAG-1 ACCCAGCTCAGAAA-1 ACCCAGCTGTTAGC-1 ACCCAGCTTGCTTT-1 ACCCGTTGATGACC-1 
#>           "0222"             "01"           "0212"             "01"             "04" 
#> ACCCGTTGCTGCAA-1 ACCCGTTGCTTCTA-1 ACCCTCGACCTATT-1 ACCCTCGACGGTAT-1 ACCCTCGATAAGGA-1 
#>             "01"             "01"            "031"             "04"           "0222" 
#> ACCCTCGATCAAGC-1 ACCGTGCTACCAGT-1 ACCGTGCTGGAACG-1 ACCTATTGCTGAGT-1 ACCTATTGTGCCCT-1 
#>           "0211"             "01"             "04"             "04"           "0221" 
#> ACCTCCGAGTCCTC-1 ACCTCCGATATGCG-1 ACCTCCGATGCTGA-1 ACCTCGTGAACCAC-1 ACCTGAGATATCGG-1 
#>             "01"             "01"             "01"             "01"           "0211" 
#> ACCTGGCTAAGTAG-1 ACCTTTGACTCCCA-1 ACCTTTGAGGAACG-1 ACCTTTGAGGAAGC-1 ACGAACACCTTGTT-1 
#>            "032"           "0222"           "0222"           "0222"            "032" 
#> ACGAACTGGCTATG-1 ACGAAGCTCTCCAC-1 ACGAAGCTCTGAGT-1 ACGACCCTATCTCT-1 ACGACCCTGATGAA-1 
#>           "0221"             "01"             "04"           "0222"             "01" 
#> ACGACCCTTGACAC-1 ACGACCCTTGACCA-1 ACGAGGGACAGGAG-1 ACGAGGGACGAACT-1 ACGAGGGATGTAGC-1 
#>             "04"             "01"           "0222"             "01"             "01" 
#> ACGAGTACCCTAAG-1 ACGAGTACGAATCC-1 ACGATCGAGGACTT-1 ACGATCGAGTCACA-1 ACGATGACAATGCC-1 
#>             "04"             "04"            "031"           "0212"             "01" 
#> ACGATGACTGGTCA-1 ACGATTCTACGGGA-1 ACGCAATGGTTCAG-1 ACGCACCTGTTAGC-1 ACGCCACTGAACTC-1 
#>             "01"            "031"            "032"             "04"           "0211" 
#> ACGCCGGAAACCAC-1 ACGCCGGAAAGCCT-1 ACGCCGGAAATGCC-1 ACGCCTTGCTCCCA-1 ACGCGGTGGCGAGA-1 
#>           "0212"             "01"             "01"           "0221"             "01" 
#> ACGCGGTGTGTGGT-1 ACGCGGTGTTTGCT-1 ACGCTCACAGTACC-1 ACGCTCACCCTTGC-1 ACGCTGCTGTTCTT-1 
#>             "04"            "031"             "01"             "01"            "032" 
#> ACGGAACTCAGATC-1 ACGGAACTGTCGTA-1 ACGGAGGACTCTTA-1 ACGGATTGGGAGGT-1 ACGGATTGGTTAGC-1 
#>            "032"           "0221"           "0212"             "04"             "01" 
#> ACGGCTCTGAGCAG-1 ACGGCTCTTGCACA-1 ACGGTAACCGCTAA-1 ACGGTAACCTTCGC-1 ACGGTAACGGTGGA-1 
#>             "01"             "01"            "031"            "031"             "01" 
#> ACGGTAACTCGCAA-1 ACGGTATGAGTCGT-1 ACGGTATGGGTATC-1 ACGGTATGGTTGTG-1 ACGGTCCTAACGGG-1 
#>             "01"           "0212"             "04"             "04"             "01" 
#> ACGGTCCTCGGGAA-1 ACGTAGACAACCAC-1 ACGTAGACTACAGC-1 ACGTCAGAAACGAA-1 ACGTCAGAGAGCTT-1 
#>             "01"             "01"             "04"             "01"           "0211" 
#> ACGTCAGAGGGATG-1 ACGTCCTGATAAGG-1 ACGTCCTGTGAACC-1 ACGTCGCTCCTGAA-1 ACGTCGCTCTATTC-1 
#>             "01"           "0212"           "0222"            "032"           "0212" 
#> ACGTCGCTTCTCAT-1 ACGTGATGCCATGA-1 ACGTGATGGGTCTA-1 ACGTGATGTAACCG-1 ACGTGATGTGACAC-1 
#>             "04"           "0222"             "01"           "0221"            "032" 
#> ACGTGCCTCCGTAA-1 ACGTGCCTTCTATC-1 ACGTTACTTTCCAT-1 ACGTTGGAAAAGCA-1 ACGTTGGAAACCTG-1 
#>             "01"            "031"             "01"             "01"            "031" 
#> ACGTTGGACCGTAA-1 ACGTTGGAGCCAAT-1 ACGTTGGATATGGC-1 ACGTTGGATCAGGT-1 ACGTTTACATCAGC-1 
#>           "0211"            "032"             "04"           "0222"             "01" 
#> ACTAAAACCCACAA-1 ACTAAAACTCGACA-1 ACTACGGAATTTCC-1 ACTACGGACCTATT-1 ACTACGGATCGCTC-1 
#>             "01"           "0212"             "01"             "01"             "01" 
#> ACTACTACTAAGGA-1 ACTAGGTGGAACCT-1 ACTAGGTGGAACTC-1 ACTATCACCTTGGA-1 ACTATCACTGCCAA-1 
#>             "01"             "01"             "01"            "031"             "01" 
#> ACTCAGGACTGAAC-1 ACTCAGGATCTATC-1 ACTCAGGATTCGTT-1 ACTCCTCTCAACTG-1 ACTCGCACGAAAGT-1 
#>             "01"             "04"           "0211"             "01"           "0212" 
#> ACTCGCACTACGAC-1 ACTCTCCTGACACT-1 ACTCTCCTGCATAC-1 ACTCTCCTGTTTGG-1 ACTGAGACAACCAC-1 
#>           "0212"             "01"             "04"             "01"            "031" 
#> ACTGAGACCCATAG-1 ACTGAGACGTTGGT-1 ACTGCCACACACGT-1 ACTGCCACTCCGTC-1 ACTGGCCTTCAGTG-1 
#>           "0221"             "04"            "031"            "032"            "032" 
#> ACTGTGGACGTGTA-1 ACTGTGGATCTAGG-1 ACTGTTACCCACAA-1 ACTGTTACTGCAGT-1 ACTTAAGAACCACA-1 
#>            "031"             "04"           "0211"             "01"             "01" 
#> ACTTAAGATTACTC-1 ACTTAGCTGCGTAT-1 ACTTAGCTGGGAGT-1 ACTTCAACAAGCAA-1 ACTTCAACGTAGGG-1 
#>           "0212"           "0221"             "01"            "031"            "032" 
#> ACTTCCCTTTCCGC-1 ACTTCTGACATGCA-1 ACTTGACTCCACAA-1 ACTTGGGAGAAAGT-1 ACTTGGGAGGTTTG-1 
#>             "01"             "04"             "04"           "0212"             "01" 
#> ACTTGGGATGTGAC-1 ACTTGGGATTGACG-1 ACTTGTACCTGTCC-1 ACTTTGTGGAAAGT-1 ACTTTGTGGATAGA-1 
#>           "0211"           "0222"             "01"             "01"           "0222" 
#> AGAAACGAAAGTAG-1 AGAAAGTGCGCAAT-1 AGAAAGTGGGGATG-1 AGAACAGAAATGCC-1 AGAACAGACGACTA-1 
#>             "04"             "01"           "0212"            "032"             "04" 
#> AGAACAGAGACAAA-1 AGAACGCTTTGCTT-1 AGAAGATGTGACTG-1 AGAATGGAAGAAGT-1 AGAATTTGTAACCG-1 
#>             "01"             "01"             "01"            "031"             "01" 
#> AGAATTTGTAGAGA-1 AGACACACTGTAGC-1 AGACACTGTCAAGC-1 AGACCTGAAGTAGA-1 AGACCTGACCAACA-1 
#>             "01"             "01"           "0212"           "0212"             "01" 
#> AGACCTGAGGAAGC-1 AGACGTACAGAGGC-1 AGACGTACCCCTAC-1 AGACGTACCTCTTA-1 AGACGTACTCGTGA-1 
#>             "01"             "01"             "04"           "0212"           "0221" 
#> AGACTGACCATCAG-1 AGACTGACCCTTTA-1 AGACTTCTCATGCA-1 AGAGATGACAGTCA-1 AGAGATGACTGAAC-1 
#>             "01"             "01"             "04"             "04"             "01" 
#> AGAGATGAGGTTTG-1 AGAGATGATCTCGC-1 AGAGATGATTGTGG-1 AGAGCGGAGGCAAG-1 AGAGTCTGGTCGTA-1 
#>           "0211"             "04"             "01"           "0222"           "0221" 
#> AGAGTGCTCAGCTA-1 AGAGTGCTCGAATC-1 AGAGTGCTGTCATG-1 AGAGTGCTGTCCTC-1 AGAGTGCTGTGTTG-1 
#>             "01"             "01"             "01"             "01"             "04" 
#> AGATATACCCGTAA-1 AGATATACGATGAA-1 AGATATACTGTTCT-1 AGATATTGCCTACC-1 AGATATTGGCCAAT-1 
#>            "032"             "01"             "04"             "01"           "0222" 
#> AGATCGTGTCTGGA-1 AGATCGTGTTTGTC-1 AGATCTCTATCACG-1 AGATTAACGTTCTT-1 AGATTCCTATCGTG-1 
#>           "0212"             "04"             "04"           "0221"             "01" 
#> AGATTCCTCACTTT-1 AGATTCCTGACGAG-1 AGATTCCTGTTCAG-1 AGCAAAGATATGCG-1 AGCACAACAGTCTG-1 
#>           "0212"           "0212"            "032"             "01"             "01" 
#> AGCACTGAGGGAGT-1 AGCACTGATATGCG-1 AGCACTGATGCTTT-1 AGCACTGATTGCGA-1 AGCATCGAAGATCC-1 
#>             "01"             "01"           "0222"             "01"             "01" 
#> AGCATCGAAGGGTG-1 AGCATCGAGCTTCC-1 AGCATCGAGTGAGG-1 AGCATCGATAACCG-1 AGCATGACGATGAA-1 
#>             "04"           "0212"             "01"           "0222"            "031" 
#> AGCCAATGGGGAGT-1 AGCCAATGTATCTC-1 AGCCACCTGGATCT-1 AGCCGGTGCCAATG-1 AGCCGGTGTGTTTC-1 
#>           "0221"             "01"            "031"             "01"             "01" 
#> AGCCGTCTCAATCG-1 AGCCGTCTGAGAGC-1 AGCCTCACGTTCGA-1 AGCCTCACTGTCAG-1 AGCCTCTGCAGTTG-1 
#>             "01"             "01"             "01"           "0222"             "04" 
#> AGCCTCTGCCAATG-1 AGCGAACTGGATCT-1 AGCGAACTTACTGG-1 AGCGATACGGAGCA-1 AGCGATTGAGATCC-1 
#>            "032"             "01"             "01"             "01"            "032" 
#> AGCGCCGAATCTCT-1 AGCGCCGACAGAGG-1 AGCGCTCTACCTTT-1 AGCGGCACCGGGAA-1 AGCGGCTGATGTGC-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> AGCGGGCTTGCCAA-1 AGCGTAACATGCTG-1 AGCGTAACTGAGAA-1 AGCTCGCTACTGGT-1 AGCTCGCTCTGCTC-1 
#>             "01"             "01"           "0222"             "01"             "01" 
#> AGCTGAACCATACG-1 AGCTGAACCTCTCG-1 AGCTGCCTTGGGAG-1 AGCTGCCTTTCATC-1 AGCTGCCTTTCTGT-1 
#>           "0221"             "01"           "0211"             "01"             "01" 
#> AGCTGTGATCCAAG-1 AGCTTTACAAGTAG-1 AGCTTTACACCAAC-1 AGCTTTACTCTCAT-1 AGGAAATGAGGAGC-1 
#>             "01"             "01"             "01"             "04"             "01" 
#> AGGAACCTCTTAGG-1 AGGAACCTTGCCTC-1 AGGAATGATAACGC-1 AGGAATGATTTGTC-1 AGGAGTCTGGTTTG-1 
#>           "0221"            "031"             "01"             "01"             "01" 
#> AGGAGTCTTGTCAG-1 AGGATAGACATTTC-1 AGGATAGAGGATTC-1 AGGATGCTACTAGC-1 AGGATGCTTTAGGC-1 
#>             "01"             "01"            "031"             "04"            "032" 
#> AGGCAACTGAAGGC-1 AGGCAGGAGTACCA-1 AGGCCTCTAGTCGT-1 AGGCCTCTCGGAGA-1 AGGCCTCTCGTAAC-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> AGGGACGACGTTGA-1 AGGGACGAGTCAAC-1 AGGGACGAGTTGTG-1 AGGGACGATAGAGA-1 AGGGACGATGCATG-1 
#>             "01"            "032"             "01"             "01"            "031" 
#> AGGGAGTGAGCCTA-1 AGGGCCACCATACG-1 AGGGCGCTAACCAC-1 AGGGCGCTATGGTC-1 AGGGTGGACAGTCA-1 
#>             "01"             "01"           "0212"            "031"             "04" 
#> AGGGTGGACTCAAG-1 AGGGTGGAGTTGCA-1 AGGGTTTGTTCATC-1 AGGTCATGAGTGTC-1 AGGTCATGCTTATC-1 
#>           "0212"            "031"           "0211"             "04"             "01" 
#> AGGTCTGATTCTCA-1 AGGTGGGAAGAATG-1 AGGTGGGAAGTTCG-1 AGGTGTTGGTTACG-1 AGGTTCGAACCTCC-1 
#>           "0221"             "01"             "01"             "04"           "0211" 
#> AGGTTCGAACGTAC-1 AGGTTCGAGGGTGA-1 AGTAAGGAGTTTGG-1 AGTAAGGATTCTTG-1 AGTAATACATCACG-1 
#>           "0211"             "01"             "01"             "01"            "031" 
#> AGTAATACCGAACT-1 AGTAATTGTCCCAC-1 AGTACGTGAGGGTG-1 AGTACGTGCTGCAA-1 AGTACGTGCTTGGA-1 
#>             "04"             "01"             "01"             "01"             "01" 
#> AGTACTCTACGTGT-1 AGTACTCTCAACCA-1 AGTACTCTCGGTAT-1 AGTAGGCTTGCCTC-1 AGTATAACTTGTCT-1 
#>             "04"            "031"             "01"           "0221"           "0221" 
#> AGTATCCTAGAACA-1 AGTCACGATGAGCT-1 AGTCAGACGAATAG-1 AGTCAGACGCTTAG-1 AGTCAGACTAGAGA-1 
#>             "01"            "031"             "01"             "01"            "031" 
#> AGTCAGACTGCACA-1 AGTCCAGATATCTC-1 AGTCCAGATTTCAC-1 AGTCGAACCAACCA-1 AGTCGCCTCCGTAA-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> AGTCTACTAGGGTG-1 AGTCTACTTGCATG-1 AGTCTTACACCACA-1 AGTCTTACTTCGCC-1 AGTCTTACTTCGGA-1 
#>           "0211"           "0221"             "01"             "01"            "032" 
#> AGTGACTGCAACTG-1 AGTGTTCTAACCTG-1 AGTGTTCTATAAGG-1 AGTGTTCTCACTTT-1 AGTTAAACCACTTT-1 
#>           "0221"             "01"             "01"           "0212"             "01" 
#> AGTTATGAACAGTC-1 AGTTATGACTGAGT-1 AGTTATGAGTTCAG-1 AGTTCTACCAGCTA-1 AGTTCTTGAAGCCT-1 
#>           "0212"             "01"             "01"           "0211"            "031" 
#> AGTTGTCTACTACG-1 AGTTTAGATGGTCA-1 AGTTTCACGGTCTA-1 AGTTTGCTACAGTC-1 AGTTTGCTACTGGT-1 
#>             "01"             "01"            "031"             "01"            "031" 
#> AGTTTGCTCCAAGT-1 ATAAACACAGTGCT-1 ATAAACACCACCAA-1 ATAACAACATGCTG-1 ATAACAACGTCTAG-1 
#>             "01"             "04"             "01"           "0212"             "01" 
#> ATAACAACTTTGTC-1 ATAACATGTACTCT-1 ATAACCCTGTTGGT-1 ATAACCCTTGGTAC-1 ATAAGTACGAATGA-1 
#>             "01"             "01"             "01"             "01"             "04" 
#> ATAAGTTGGTACGT-1 ATAAGTTGTCTAGG-1 ATAATCGAGCTGAT-1 ATAATCGATGGTTG-1 ATAATGACCTACTT-1 
#>           "0211"             "01"             "04"             "01"             "01" 
#> ATAATGACTCGTGA-1 ATACAATGTTAGGC-1 ATACCACTCGTACA-1 ATACCACTCTAAGC-1 ATACCACTGCCAAT-1 
#>           "0211"             "01"           "0212"           "0222"            "031" 
#> ATACCGGAATGCTG-1 ATACCGGACATTTC-1 ATACCGGACTTCGC-1 ATACCGGAGGTGTT-1 ATACCGGATCTCGC-1 
#>           "0222"           "0212"             "01"           "0212"             "01" 
#> ATACCTACGCATCA-1 ATACCTTGGGGCAA-1 ATACGGACAGACTC-1 ATACGGACCTACTT-1 ATACGGACGAGGTG-1 
#>             "01"             "01"           "0211"           "0211"             "04" 
#> ATACGGACTATGCG-1 ATACGGACTCTGGA-1 ATACGTCTTAACGC-1 ATACTCTGCTTCGC-1 ATACTCTGGTATGC-1 
#>             "04"           "0211"           "0211"           "0222"            "032" 
#> ATAGATACCATGGT-1 ATAGATACGACGAG-1 ATAGATTGGTGTAC-1 ATAGCCGAACGGAG-1 ATAGCGTGCAGATC-1 
#>             "01"             "01"             "04"             "01"             "01" 
#> ATAGCGTGCCCTTG-1 ATAGCGTGGTATCG-1 ATAGCGTGTCTCTA-1 ATAGCTCTCTGATG-1 ATAGCTCTGAGGTG-1 
#>           "0212"           "0211"             "01"             "01"             "01" 
#> ATAGGAGAAACAGA-1 ATAGGCTGTCAGAC-1 ATAGTCCTAGTGTC-1 ATAGTCCTTGCATG-1 ATAGTCCTTGTCGA-1 
#>           "0222"             "01"           "0212"             "01"             "01" 
#> ATAGTTGACAACTG-1 ATAGTTGACCCTCA-1 ATAGTTGAGACGTT-1 ATAGTTGATAAGCC-1 ATATACGAAGCCAT-1 
#>             "01"           "0221"             "01"             "01"             "01" 
#> ATATACGAATTGGC-1 ATATAGTGGAATGA-1 ATATGCCTAGATCC-1 ATATGCCTGGACAG-1 ATATGCCTTCTCTA-1 
#>             "01"           "0211"           "0211"             "01"             "01" 
#> ATATGCCTTGGTAC-1 ATCAAATGAGCCTA-1 ATCAAATGGGTAAA-1 ATCAACCTAAACGA-1 ATCAACCTGAGGAC-1 
#>             "01"           "0212"           "0221"             "01"             "01" 
#> ATCAACCTTCTCTA-1 ATCAACCTTTGTCT-1 ATCACACTTTGTCT-1 ATCACGGATTTCGT-1 ATCATCTGACACCA-1 
#>            "031"             "01"             "01"             "04"            "032" 
#> ATCATGCTAGAGTA-1 ATCATGCTGAACCT-1 ATCCAGGACGCTAA-1 ATCCAGGATGGAAA-1 ATCCATACTCCTTA-1 
#>            "031"             "04"           "0221"             "01"           "0212" 
#> ATCCATACTTCATC-1 ATCCCGTGCAGTCA-1 ATCCCGTGCATGCA-1 ATCCCGTGGCTGAT-1 ATCCGCACGCATCA-1 
#>           "0221"            "032"             "04"             "04"             "04" 
#> ATCCTAACGACGGA-1 ATCCTAACGCTACA-1 ATCGACGAAACTGC-1 ATCGACGAATGACC-1 ATCGAGTGGACGTT-1 
#>             "04"            "031"           "0222"             "01"            "031" 
#> ATCGCAGAATCTCT-1 ATCGCAGAGTGTCA-1 ATCGCCACTGAGGG-1 ATCGCCTGGGTCAT-1 ATCGCCTGTGGCAT-1 
#>           "0221"             "04"            "031"             "01"             "04" 
#> ATCGCGCTCAGAGG-1 ATCGCGCTGGGATG-1 ATCGCGCTTTTCGT-1 ATCGGAACCAGTCA-1 ATCGGTGAGTCAAC-1 
#>           "0212"             "01"             "04"             "01"             "01" 
#> ATCGGTGATTGCAG-1 ATCGTTTGCCTACC-1 ATCGTTTGGGTACT-1 ATCGTTTGTGCCAA-1 ATCTACACCCGCTT-1 
#>             "01"           "0222"           "0211"           "0211"           "0211" 
#> ATCTACACCGGGAA-1 ATCTCAACAGGAGC-1 ATCTCAACCTCGAA-1 ATCTCAACCTTGTT-1 ATCTGGGAAACCAC-1 
#>             "01"             "04"             "01"           "0212"           "0222" 
#> ATCTGGGAAGTGTC-1 ATCTGGGATTCCGC-1 ATCTGTTGAACGGG-1 ATCTGTTGACCTCC-1 ATCTGTTGCCTTCG-1 
#>           "0222"             "01"             "01"             "01"           "0222" 
#> ATCTGTTGGTTGCA-1 ATCTTGACACCAAC-1 ATCTTGACCTCCCA-1 ATCTTTCTGCATCA-1 ATCTTTCTGTTTCT-1 
#>             "01"             "01"           "0211"             "01"             "01" 
#> ATCTTTCTTGTCCC-1 ATGAAACTCTGTGA-1 ATGAAACTGAGGCA-1 ATGAAGGAACAGCT-1 ATGAAGGACCTGTC-1 
#>            "032"             "01"             "01"            "031"             "04" 
#> ATGAAGGACCTTAT-1 ATGAAGGACTAGTG-1 ATGAAGGACTTGCC-1 ATGACGTGACGACT-1 ATGACGTGATCGGT-1 
#>             "04"             "04"            "032"             "04"           "0221" 
#> ATGAGAGAAAGTGA-1 ATGAGAGAACGCAT-1 ATGAGAGAAGTAGA-1 ATGAGCACACAGCT-1 ATGAGCACATCTTC-1 
#>             "01"             "01"             "04"             "01"             "01" 
#> ATGATAACTTCACT-1 ATGATATGAAACAG-1 ATGATATGACTGGT-1 ATGATATGAGCACT-1 ATGATATGGTCATG-1 
#>            "032"             "01"             "01"             "01"             "01" 
#> ATGATATGGTGCTA-1 ATGATATGTTGTCT-1 ATGCACGAATGTCG-1 ATGCACGACTGTAG-1 ATGCACGAGAACCT-1 
#>            "032"           "0222"             "04"             "01"             "04" 
#> ATGCACGAGTTCGA-1 ATGCACGATTGGTG-1 ATGCAGTGTTACCT-1 ATGCAGTGTTCTAC-1 ATGCCAGAACGACT-1 
#>             "01"           "0222"             "04"             "01"             "01" 
#> ATGCCAGACAGTCA-1 ATGCCGCTTGAACC-1 ATGCGATGCTATGG-1 ATGCGATGCTGAGT-1 ATGCGATGGTTACG-1 
#>           "0211"           "0222"           "0222"             "01"             "04" 
#> ATGCGCCTTCATTC-1 ATGCTTTGCGAATC-1 ATGCTTTGGGCGAA-1 ATGCTTTGTAGTCG-1 ATGGACACATCGGT-1 
#>             "01"             "01"             "01"             "04"             "01" 
#> ATGGACACGCATCA-1 ATGGGTACAACCTG-1 ATGGGTACATCGGT-1 ATGGGTACTATTCC-1 ATGGGTACTGGGAG-1 
#>            "032"             "04"            "032"             "01"             "01" 
#> ATGTAAACACCTCC-1 ATGTAAACCCGCTT-1 ATGTAAACGGGATG-1 ATGTAAACTCTCCG-1 ATGTAAACTTCACT-1 
#>             "01"             "01"           "0222"             "01"           "0212" 
#> ATGTACCTCAGTCA-1 ATGTACCTTAGTCG-1 ATGTACCTTTATCC-1 ATGTACCTTTCACT-1 ATGTCACTAATGCC-1 
#>             "01"             "01"           "0211"            "031"           "0212" 
#> ATGTCACTCTGCTC-1 ATGTCGGAGGTGAG-1 ATGTTCACAGTCTG-1 ATGTTCACCGTAGT-1 ATGTTGCTTTCAGG-1 
#>             "01"             "01"           "0212"             "01"             "01" 
#> ATTAACGATGAGAA-1 ATTAACGATGCAAC-1 ATTAAGACTGCAGT-1 ATTACCTGCCTTAT-1 ATTACCTGGAGGAC-1 
#>            "032"            "031"             "01"           "0212"           "0221" 
#> ATTAGATGTTTCAC-1 ATTATGGAATCTCT-1 ATTCAAGAACGGGA-1 ATTCAAGACCTTTA-1 ATTCAGCTCATTGG-1 
#>             "01"             "01"             "01"             "01"            "032" 
#> ATTCCAACCATTGG-1 ATTCCAACTTAGGC-1 ATTCGACTCACTAG-1 ATTCGACTGAATAG-1 ATTCGACTTTTGTC-1 
#>           "0212"            "032"            "031"           "0212"           "0221" 
#> ATTCGGGAAAGGCG-1 ATTCGGGATTAGGC-1 ATTCTTCTGATACC-1 ATTGAATGGACGGA-1 ATTGATGAAGGTTC-1 
#>           "0212"             "01"             "01"             "01"             "01" 
#> ATTGATGACTGAGT-1 ATTGATGAGCGAAG-1 ATTGATGATCTATC-1 ATTGCACTGACGGA-1 ATTGCACTGAGAGC-1 
#>             "01"             "01"             "01"             "01"           "0221" 
#> ATTGCACTGGAGCA-1 ATTGCACTTAGCCA-1 ATTGCACTTGCTTT-1 ATTGCTTGTTACTC-1 ATTGGTCTGACTAC-1 
#>           "0211"             "01"           "0221"             "04"             "04" 
#> ATTGGTCTTGTCTT-1 ATTGTAGATTCCCG-1 ATTGTAGATTGCAG-1 ATTGTCTGCGTACA-1 ATTTAGGAACCATG-1 
#>             "04"           "0222"             "01"             "01"           "0221" 
#> ATTTAGGACAGAGG-1 ATTTCCGAGATGAA-1 ATTTCCGAGTGCTA-1 ATTTCGTGTATGGC-1 ATTTCTCTACTTTC-1 
#>             "01"             "01"             "01"            "031"           "0221" 
#> ATTTCTCTAGCAAA-1 ATTTCTCTCACTTT-1 ATTTCTCTTCCCAC-1 ATTTGCACAAGATG-1 CAAAGCACAGCTCA-1 
#>             "01"           "0221"             "01"           "0211"             "01" 
#> CAAAGCACCGTAAC-1 CAAAGCACGGTAAA-1 CAAAGCTGAAAGTG-1 CAAAGCTGTTGCTT-1 CAAATATGTGACAC-1 
#>             "04"            "032"             "01"           "0212"             "01" 
#> CAAATTGAGGGCAA-1 CAAATTGATGGAGG-1 CAACCAGAAAAGTG-1 CAACCAGAAGTGCT-1 CAACCAGAGTTCAG-1 
#>             "01"           "0211"             "01"             "01"           "0222" 
#> CAACCAGATAGAAG-1 CAACCGCTGTTCAG-1 CAACCGCTTTGAGC-1 CAACGATGCGCAAT-1 CAACGTGACTCCAC-1 
#>           "0211"             "01"             "01"           "0221"           "0222" 
#> CAACGTGAGCCATA-1 CAACGTGATCAAGC-1 CAAGAAGACCACAA-1 CAAGAAGACGTCTC-1 CAAGAAGATTCTAC-1 
#>            "031"           "0212"            "031"           "0222"             "01" 
#> CAAGACTGACCTGA-1 CAAGACTGAGTAGA-1 CAAGCTGACCATAG-1 CAAGCTGATCTATC-1 CAAGGACTGTTCAG-1 
#>             "04"             "04"           "0221"            "031"             "01" 
#> CAAGGACTTCTTTG-1 CAAGGTTGCTCCAC-1 CAAGGTTGTCATTC-1 CAAGGTTGTCTGGA-1 CAAGTCGAAACAGA-1 
#>            "031"             "01"             "04"            "032"             "04" 
#> CAAGTCGATAGCGT-1 CAATAAACGCCATA-1 CAATAATGAACTGC-1 CAATATGACATGGT-1 CAATATGACCTTCG-1 
#>           "0212"           "0211"           "0212"             "01"            "031" 
#> CAATATGACGTTAG-1 CAATATGAGGAGCA-1 CAATCGGAGAAACA-1 CAATCTACTGACTG-1 CAATTCACCCAACA-1 
#>             "01"             "01"             "01"            "032"            "031" 
#> CAATTCACGATAGA-1 CAATTCACTTGTGG-1 CAATTCTGCTTGTT-1 CAATTCTGGCGTAT-1 CACAACGATACGAC-1 
#>             "01"             "01"           "0222"           "0221"             "01" 
#> CACAATCTTGTTCT-1 CACAATCTTTCCAT-1 CACACCTGCTTGAG-1 CACACCTGTATGGC-1 CACAGAACCCTTGC-1 
#>             "01"             "01"             "01"             "01"             "04" 
#> CACAGAACCTGATG-1 CACAGATGGGATTC-1 CACAGATGGTTTCT-1 CACAGCCTGATACC-1 CACAGCCTTGCCAA-1 
#>             "01"             "01"           "0212"             "01"           "0221" 
#> CACAGCCTTGTAGC-1 CACAGTGATGAAGA-1 CACATACTACAGCT-1 CACATGGAACACGT-1 CACATGGAAGTCGT-1 
#>             "01"           "0212"            "031"             "01"             "01" 
#> CACCACTGCCAACA-1 CACCACTGGCGAAG-1 CACCCATGTTCTGT-1 CACCGGGAATCGAC-1 CACCGGGACGAGAG-1 
#>             "01"            "031"            "031"             "01"            "031" 
#> CACCGGGACGTGTA-1 CACCGGGACTTCTA-1 CACCGGGACTTGCC-1 CACCGGGATTCGGA-1 CACCGTACTAAGGA-1 
#>             "01"            "032"            "031"            "031"             "04" 
#> CACCGTACTAGCGT-1 CACCTGACACCCAA-1 CACCTGACCAGAAA-1 CACCTGACCTCAAG-1 CACCTGACGAAAGT-1 
#>             "01"            "031"             "01"            "031"             "04" 
#> CACCTGACTCGTAG-1 CACGAAACTTCCGC-1 CACGACCTCGATAC-1 CACGCTACAGAAGT-1 CACGCTACTGTTCT-1 
#>             "01"             "04"             "04"             "01"             "04" 
#> CACGGGACAGAGTA-1 CACGGGACATAAGG-1 CACGGGACGTAGGG-1 CACGGGTGCTTCGC-1 CACGGGTGGAGGAC-1 
#>             "01"             "01"             "01"            "031"            "031" 
#> CACGGGTGTGTTTC-1 CACTAACTCCTAAG-1 CACTAACTGAAAGT-1 CACTAGGATGATGC-1 CACTATACCCCGTT-1 
#>             "01"             "04"             "01"             "04"             "04" 
#> CACTATACGTTTGG-1 CACTGAGACAGTCA-1 CACTGCACTTCATC-1 CACTGCTGAGACTC-1 CACTGCTGGAAAGT-1 
#>            "031"           "0211"             "01"           "0221"             "01" 
#> CACTTAACCGAATC-1 CACTTAACCGTACA-1 CACTTTGACTCTAT-1 CACTTTGAGCTGTA-1 CAGAAGCTCTCAAG-1 
#>             "01"             "04"            "031"             "01"             "01" 
#> CAGACATGAACGGG-1 CAGACATGTCGACA-1 CAGACCCTAAGGTA-1 CAGACCCTAATGCC-1 CAGACCCTAGGAGC-1 
#>             "01"             "01"           "0221"             "01"             "01" 
#> CAGACTGAGTATGC-1 CAGATCGAATGTCG-1 CAGATCGACCTGAA-1 CAGATCGATATGGC-1 CAGATGACATTCTC-1 
#>             "01"             "04"             "01"             "01"            "032" 
#> CAGCAATGCCTTCG-1 CAGCAATGGAGGGT-1 CAGCAATGGTGCTA-1 CAGCAATGTCTACT-1 CAGCAATGTGACCA-1 
#>             "01"            "032"             "01"           "0212"             "01" 
#> CAGCAATGTGAGGG-1 CAGCACCTAAGCCT-1 CAGCACCTAGGCGA-1 CAGCACCTGTAGGG-1 CAGCATGACAACCA-1 
#>           "0211"             "01"             "01"           "0222"           "0212" 
#> CAGCATGAGACGTT-1 CAGCCTACCCAACA-1 CAGCCTTGCTACCC-1 CAGCCTTGGGGACA-1 CAGCGGACACCCTC-1 
#>             "01"             "01"           "0212"             "01"             "01" 
#> CAGCGGACCTTTAC-1 CAGCGTCTAAAGCA-1 CAGCGTCTTATCGG-1 CAGCTAGATGTGAC-1 CAGCTCTGAGGCGA-1 
#>            "032"             "01"             "01"           "0211"             "01" 
#> CAGCTCTGCAAGCT-1 CAGCTCTGTCGTAG-1 CAGCTCTGTGTGGT-1 CAGGAACTAACTGC-1 CAGGAACTCTCAGA-1 
#>            "031"           "0222"            "032"             "01"           "0211" 
#> CAGGCCGAACACCA-1 CAGGCCGAACACGT-1 CAGGCCGAACGACT-1 CAGGCCGAATCTCT-1 CAGGCCGACTAGCA-1 
#>             "01"             "01"             "01"           "0222"             "04" 
#> CAGGGCACCATACG-1 CAGGGCACCCAACA-1 CAGGGCACTCCCGT-1 CAGGTAACAGACTC-1 CAGGTATGAGTCGT-1 
#>             "04"             "01"             "01"           "0212"             "01" 
#> CAGGTATGTGCTTT-1 CAGGTTGAGGATCT-1 CAGTGATGGACGGA-1 CAGTGATGGCTAAC-1 CAGTGATGGGACAG-1 
#>             "01"             "04"             "04"            "032"             "01" 
#> CAGTGATGTAAGGA-1 CAGTGATGTACGCA-1 CAGTGTGATGTCAG-1 CAGTTACTAAGGTA-1 CAGTTACTGATAGA-1 
#>             "04"             "04"             "01"             "04"             "01" 
#> CAGTTGGAAAGAGT-1 CAGTTGGACATACG-1 CAGTTTACACACGT-1 CAGTTTACCCCAAA-1 CATAAAACGGAGCA-1 
#>           "0222"             "01"            "032"             "01"           "0212" 
#> CATAAATGAACTGC-1 CATAACCTTCTCCG-1 CATACTACCTCGAA-1 CATACTACCTGAAC-1 CATACTACGTACCA-1 
#>             "01"             "01"             "01"             "01"           "0211" 
#> CATACTTGGGTTAC-1 CATAGTCTAATCGC-1 CATAGTCTCACTTT-1 CATATAGACTAAGC-1 CATATAGATCAGGT-1 
#>           "0221"             "01"             "01"           "0212"             "04" 
#> CATCAACTAGAAGT-1 CATCAACTCCCTCA-1 CATCAGGACTTCCG-1 CATCAGGATAGCCA-1 CATCAGGATCCTAT-1 
#>             "01"             "01"            "032"            "032"           "0221" 
#> CATCAGGATGCACA-1 CATCAGGATTTCGT-1 CATCATACCGCATA-1 CATCATACGGAGCA-1 CATCATACTCAAGC-1 
#>           "0221"           "0211"           "0222"             "04"             "01" 
#> CATCGCTGGGATCT-1 CATCGCTGTGGCAT-1 CATCGGCTATGCTG-1 CATCGGCTTTGGCA-1 CATCTCCTATGTGC-1 
#>             "01"             "04"             "01"             "01"             "04" 
#> CATCTCCTCGAACT-1 CATGAGACACGGGA-1 CATGAGACGTTGAC-1 CATGAGACTCGCCT-1 CATGCCACGGGTGA-1 
#>           "0222"             "04"            "032"             "01"             "01" 
#> CATGCCACTGCCAA-1 CATGCGCTAGTCAC-1 CATGCGCTCAGATC-1 CATGCGCTTTGCAG-1 CATGGCCTAGGGTG-1 
#>             "01"           "0221"           "0211"           "0221"           "0211" 
#> CATGGCCTGTGCAT-1 CATGTACTATCGTG-1 CATGTTACAGTCGT-1 CATGTTACCTGAGT-1 CATGTTTGGGGATG-1 
#>             "01"            "031"            "031"             "01"           "0212" 
#> CATTACACACGGAG-1 CATTACACCAACTG-1 CATTACACGGAGTG-1 CATTACACTACTCT-1 CATTAGCTCCACAA-1 
#>             "04"            "032"             "01"             "01"           "0212" 
#> CATTGACTAGCGGA-1 CATTGGGACTCGAA-1 CATTGTACAGCGTT-1 CATTGTACTCGATG-1 CATTGTACTTATCC-1 
#>           "0212"             "01"             "01"             "04"             "01" 
#> CATTGTACTTTGCT-1 CATTGTTGCTAGTG-1 CATTTCGACTCTAT-1 CATTTCGAGATACC-1 CATTTGACCACACA-1 
#>           "0221"             "01"            "031"            "032"            "031" 
#> CATTTGACCCTGAA-1 CATTTGTGACGACT-1 CATTTGTGCATTGG-1 CATTTGTGCGGAGA-1 CATTTGTGGGATCT-1 
#>            "031"             "04"             "01"             "01"             "04" 
#> CCAAAGTGCTACGA-1 CCAAAGTGTGAGAA-1 CCAACCTGAAGTAG-1 CCAACCTGACGTAC-1 CCAACCTGTTCGCC-1 
#>           "0222"           "0211"            "031"           "0212"           "0212" 
#> CCAAGAACCCAATG-1 CCAAGAACGTAGCT-1 CCAAGAACGTGTCA-1 CCAAGAACTACTGG-1 CCAAGAACTCCTAT-1 
#>             "01"             "01"             "01"            "031"             "04" 
#> CCAAGATGTCATTC-1 CCAAGATGTTTCAC-1 CCAAGTGAGGAACG-1 CCAAGTGATCAAGC-1 CCAATTTGAACGTC-1 
#>             "01"             "01"             "01"             "01"           "0212" 
#> CCACCATGAACGTC-1 CCACCATGATCGGT-1 CCACCATGGACGAG-1 CCACCATGGGGAGT-1 CCACCATGTCCTGC-1 
#>             "01"             "01"           "0221"             "01"            "031" 
#> CCACTGACCCGCTT-1 CCACTGTGGGAAGC-1 CCACTGTGTGTAGC-1 CCACTTCTCGGGAA-1 CCAGAAACCCTGTC-1 
#>           "0212"           "0211"             "01"           "0222"             "04" 
#> CCAGAAACGAACTC-1 CCAGAAACGGTCTA-1 CCAGACCTCTGAGT-1 CCAGACCTTGTGGT-1 CCAGCACTGCGATT-1 
#>             "01"             "01"             "04"             "01"           "0221" 
#> CCAGCGGAAAGGCG-1 CCAGCGGACGACTA-1 CCAGCGGATGGGAG-1 CCAGCTACACAGTC-1 CCAGCTACCAGCTA-1 
#>           "0211"           "0212"             "01"             "01"             "04" 
#> CCAGGTCTACACCA-1 CCAGGTCTAGCATC-1 CCAGGTCTATGGTC-1 CCAGTCACACTGGT-1 CCAGTCACACTGTG-1 
#>             "04"           "0211"             "01"           "0212"             "04" 
#> CCAGTCACGTTGTG-1 CCAGTGCTAACCAC-1 CCAGTGCTCGTAGT-1 CCATCCGAAAGCAA-1 CCATCCGAACGACT-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> CCATCCGAAGGTTC-1 CCATCCGATTCGCC-1 CCATCGTGAACGGG-1 CCATCGTGCTAGAC-1 CCCAACACCTCGCT-1 
#>             "04"           "0211"             "01"           "0221"             "04" 
#> CCCAACACGCATCA-1 CCCAACACTTTGTC-1 CCCAACTGCAATCG-1 CCCAGACTGCCTTC-1 CCCAGACTGGTTTG-1 
#>             "01"           "0222"           "0211"           "0222"             "04" 
#> CCCAGACTTTCGCC-1 CCCAGTTGCAGTTG-1 CCCAGTTGGGTACT-1 CCCAGTTGTCTATC-1 CCCGATTGTGTTTC-1 
#>           "0221"           "0222"             "01"             "04"             "01" 
#> CCCGGAGAAGGGTG-1 CCCTACGAATTGGC-1 CCCTAGTGCAAAGA-1 CCCTCAGACACTTT-1 CCCTCAGACGAGAG-1 
#>           "0211"           "0211"             "01"             "04"             "01" 
#> CCCTCAGAGGTCAT-1 CCCTGAACTAAAGG-1 CCCTGATGCAACCA-1 CCCTGATGCAAGCT-1 CCCTTACTAACCAC-1 
#>             "01"             "04"             "01"             "04"           "0222" 
#> CCCTTACTGCAGTT-1 CCGAAAACCTTGTT-1 CCGACACTGGTTTG-1 CCGACTACCCAGTA-1 CCGACTACCGTGTA-1 
#>             "01"           "0221"             "01"           "0222"             "01" 
#> CCGACTACTGAGGG-1 CCGATAGACCTAAG-1 CCGATAGAGTTGGT-1 CCGCGAGACACACA-1 CCGCGAGAGGTTCA-1 
#>             "01"             "01"           "0222"           "0212"             "01" 
#> CCGCTATGGGACGA-1 CCGCTATGTGCAAC-1 CCGCTATGTGCACA-1 CCGGTACTGTCCTC-1 CCGTACACAAGCAA-1 
#>             "04"           "0222"           "0212"             "01"             "01" 
#> CCGTACACAGCGTT-1 CCGTACACGTCATG-1 CCGTACACGTTGGT-1 CCGTACACTAACGC-1 CCTAAACTTTCGTT-1 
#>             "04"            "031"           "0222"             "01"             "01" 
#> CCTAAGGACCCAAA-1 CCTAAGGACTAGCA-1 CCTAAGGAGGGCAA-1 CCTAAGGATGATGC-1 CCTAAGGATGTCAG-1 
#>             "01"           "0211"            "031"             "01"             "01" 
#> CCTACCGACTCTTA-1 CCTACCGAGGGATG-1 CCTAGAGAGGTGAG-1 CCTATAACCAAAGA-1 CCTATAACGAGACG-1 
#>             "01"             "04"             "04"             "01"           "0211" 
#> CCTATAACTCAGAC-1 CCTATAACTGCATG-1 CCTCGAACACTTTC-1 CCTCGAACCCGTAA-1 CCTCGAACGTATCG-1 
#>             "01"           "0221"            "032"           "0221"             "01" 
#> CCTCGAACTTACTC-1 CCTCTACTCTTCGC-1 CCTCTACTGGCATT-1 CCTGACTGAAGTAG-1 CCTGACTGGGGAGT-1 
#>             "01"           "0212"             "01"             "01"             "01" 
#> CCTGACTGTGTCTT-1 CCTGCAACACGTTG-1 CCTGGACTCGTGAT-1 CCTTAATGCCCAAA-1 CCTTAATGTTCTAC-1 
#>             "04"           "0212"             "01"             "04"           "0221" 
#> CCTTCACTACGACT-1 CCTTCACTCAGTCA-1 CCTTCACTGGAGTG-1 CCTTTAGATTCATC-1 CGAACATGCCCTAC-1 
#>             "01"             "04"           "0211"           "0212"           "0212" 
#> CGAACATGTCAGAC-1 CGAAGACTGGAACG-1 CGAAGACTGTTACG-1 CGAAGGGAAACCTG-1 CGAAGGGATCCGAA-1 
#>             "01"             "01"             "01"            "031"             "04" 
#> CGAAGTACCAACTG-1 CGAATCGAGGAGCA-1 CGAATCGAGGAGGT-1 CGACAAACCCATAG-1 CGACAAACCGACAT-1 
#>             "04"           "0211"             "01"             "01"             "04" 
#> CGACCACTAAAGTG-1 CGACCACTGCCAAT-1 CGACCGGAAGGTCT-1 CGACCGGATGGAAA-1 CGACCTTGCTAGTG-1 
#>            "032"            "032"             "01"             "01"             "01" 
#> CGACGTCTATCGTG-1 CGACGTCTCGTGTA-1 CGACGTCTGAGGCA-1 CGACTCACGTCGTA-1 CGACTCACGTTGCA-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> CGACTCTGTGTGAC-1 CGACTGCTTCCTCG-1 CGAGAACTAAGGCG-1 CGAGAACTACGTTG-1 CGAGAACTTGTTCT-1 
#>             "01"           "0212"            "031"             "01"           "0212" 
#> CGAGATTGGACACT-1 CGAGATTGGCCATA-1 CGAGCCGAACACCA-1 CGAGCCGAGGCGAA-1 CGAGCGTGCTCCAC-1 
#>            "031"            "031"             "01"             "01"             "01" 
#> CGAGCGTGGATACC-1 CGAGCGTGTATGCG-1 CGAGGAGACCTCCA-1 CGAGGAGATGTCGA-1 CGAGGCACCTATGG-1 
#>             "01"           "0211"             "04"             "01"            "031" 
#> CGAGGCACTATGCG-1 CGAGGCACTCTTCA-1 CGAGGCTGACGCTA-1 CGAGGCTGGCAGTT-1 CGAGGGCTACGACT-1 
#>           "0222"             "01"            "032"           "0212"             "04" 
#> CGAGGGCTCGAATC-1 CGAGTATGTCACCC-1 CGATACGAACAGTC-1 CGATACGACAGGAG-1 CGATACGATTCACT-1 
#>             "01"           "0221"           "0222"            "031"             "04" 
#> CGATAGACCCGTAA-1 CGATAGACCGTACA-1 CGATAGACGTAGGG-1 CGATAGACTGTTCT-1 CGATCAGAAGAACA-1 
#>           "0211"             "01"           "0211"             "01"            "031" 
#> CGATCAGAGAGGGT-1 CGATCAGAGGTACT-1 CGATCAGATGTGAC-1 CGATCCACCGGGAA-1 CGATCCACTTCCAT-1 
#>             "01"             "01"           "0222"            "031"             "04" 
#> CGCAAATGCTCGAA-1 CGCAACCTCCTTGC-1 CGCAACCTGGACGA-1 CGCACGGAGGACGA-1 CGCACGGATCTTTG-1 
#>             "01"             "01"             "01"             "04"             "01" 
#> CGCACTACAGAATG-1 CGCACTACAGCCAT-1 CGCACTACATTGGC-1 CGCACTACTCGCCT-1 CGCACTACTCGTGA-1 
#>             "01"             "01"             "01"             "04"             "01" 
#> CGCACTTGTCACGA-1 CGCAGGACAGATCC-1 CGCAGGACCTACTT-1 CGCAGGACTTGTCT-1 CGCAGGTGCACTGA-1 
#>           "0212"             "01"             "01"           "0221"             "01" 
#> CGCAGGTGCCATAG-1 CGCAGGTGGGAACG-1 CGCATAGATCACGA-1 CGCCATACTGCAAC-1 CGCCATTGAGAGGC-1 
#>           "0221"             "01"           "0211"             "01"             "01" 
#> CGCCATTGCTATGG-1 CGCCATTGGAGACG-1 CGCCATTGGAGCAG-1 CGCCATTGTACTGG-1 CGCCGAGAGCTTAG-1 
#>             "01"             "01"             "04"             "04"            "032" 
#> CGCCTAACGAATGA-1 CGCCTAACTGCTCC-1 CGCGAGACACAGCT-1 CGCGAGACAGGTCT-1 CGCGAGACGCTACA-1 
#>           "0222"             "01"             "01"             "04"             "01" 
#> CGCGATCTCAGTCA-1 CGCGATCTGTTGAC-1 CGCGATCTTTCTTG-1 CGCGGATGGCCAAT-1 CGCTAAGAATGTCG-1 
#>           "0212"           "0212"             "04"             "01"             "01" 
#> CGCTAAGACAACTG-1 CGCTAAGACCCTTG-1 CGCTACTGAACAGA-1 CGCTACTGAGAACA-1 CGCTACTGTGAGCT-1 
#>             "01"             "01"           "0222"             "01"             "01" 
#> CGCTACTGTTCCCG-1 CGCTCATGCATTTC-1 CGGAATTGGTTTGG-1 CGGAATTGTGGAGG-1 CGGACCGATGCGTA-1 
#>            "031"           "0211"             "01"             "01"            "031" 
#> CGGACCGATGGGAG-1 CGGACTCTAAACAG-1 CGGACTCTCCAATG-1 CGGACTCTCCTCGT-1 CGGAGGCTATTCCT-1 
#>             "01"             "04"             "01"            "032"             "01" 
#> CGGAGGCTTGGATC-1 CGGATAACAACGAA-1 CGGATAACAGCTCA-1 CGGATAACTCAGTG-1 CGGCACGAACTCAG-1 
#>             "01"           "0212"             "01"           "0211"             "01" 
#> CGGCACGAAGGGTG-1 CGGCACGACTACGA-1 CGGCATCTTAGAAG-1 CGGCATCTTCGTAG-1 CGGCCAGAAAGGTA-1 
#>             "01"           "0221"             "01"           "0212"             "01" 
#> CGGCCAGAGAGGCA-1 CGGCGAACCAGTCA-1 CGGCGAACGACAAA-1 CGGCGAACGGTCTA-1 CGGCGAACTACTTC-1 
#>            "031"           "0222"            "032"             "01"            "032" 
#> CGGGACTGCGTGTA-1 CGGGACTGGAATAG-1 CGGGCATGACCCAA-1 CGGGCATGTCTCTA-1 CGGGCATGTTGTGG-1 
#>             "01"            "031"            "031"            "031"             "01" 
#> CGGTAAACTCGCAA-1 CGGTCACTGTTTGG-1 CGGTCACTTACTTC-1 CGTAACGATCGCCT-1 CGTACCACACACAC-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> CGTACCACACGTTG-1 CGTACCACCTCATT-1 CGTACCACGGAGCA-1 CGTACCTGGCATCA-1 CGTAGCCTCTCTCG-1 
#>             "01"             "01"             "01"            "032"           "0212" 
#> CGTAGCCTGCGAAG-1 CGTAGCCTGTATGC-1 CGTCAAGAAAGGTA-1 CGTCAAGAACGTGT-1 CGTCAAGACAGAGG-1 
#>             "01"           "0221"           "0211"             "01"             "01" 
#> CGTCAAGACAGGAG-1 CGTCCATGCTCTTA-1 CGTCGACTTTCCGC-1 CGTGATGACGCTAA-1 CGTGATGAGGTTCA-1 
#>            "031"             "01"             "01"             "01"             "01" 
#> CGTGCACTTATGGC-1 CGTGTAGAAAAACG-1 CGTGTAGACGATAC-1 CGTGTAGAGTTACG-1 CGTGTAGAGTTCAG-1 
#>           "0222"             "01"            "031"            "032"           "0211" 
#> CGTGTAGATTCGGA-1 CGTTAGGAAACCAC-1 CGTTAGGATCATTC-1 CGTTATACCCTGAA-1 CGTTTAACTGGTCA-1 
#>            "032"             "01"           "0222"            "031"             "01" 
#> CTAAACCTCTGACA-1 CTAAACCTGTGCAT-1 CTAACACTAACGTC-1 CTAACACTAGTGCT-1 CTAACGGAACCGAT-1 
#>            "032"             "04"             "01"           "0222"            "032" 
#> CTAACGGATTTCTG-1 CTAACTACGGCAAG-1 CTAAGGACACCATG-1 CTAAGGACCGTTAG-1 CTAAGGACGCCATA-1 
#>             "01"             "01"             "01"             "01"           "0212" 
#> CTAAGGTGCCTAAG-1 CTAAGGTGTTGCAG-1 CTAAGGTGTTTCTG-1 CTAATAGAGCTATG-1 CTAATGCTTGTGGT-1 
#>             "04"             "01"             "01"             "01"           "0212" 
#> CTACAACTCCCGTT-1 CTACCTCTCAACCA-1 CTACGCACACCTAG-1 CTACGCACTCTCCG-1 CTACGCACTGGTCA-1 
#>            "031"             "01"           "0221"             "01"            "032" 
#> CTACGGCTTTCTTG-1 CTACTATGAACCAC-1 CTACTATGATGTGC-1 CTACTATGCTAAGC-1 CTACTATGTAAAGG-1 
#>           "0222"           "0212"           "0211"             "01"             "04" 
#> CTACTCCTATGTCG-1 CTACTCCTGCCATA-1 CTAGAGACACTTTC-1 CTAGAGACAGCATC-1 CTAGAGACTTTGGG-1 
#>            "032"           "0211"             "01"            "031"           "0221" 
#> CTAGATCTCTCTAT-1 CTAGATCTTCGACA-1 CTAGGATGAGCCTA-1 CTAGGATGATCGTG-1 CTAGGCCTCTCAGA-1 
#>             "01"             "01"             "04"             "04"             "01" 
#> CTAGGTGATGGTTG-1 CTAGTTACCAGAGG-1 CTAGTTACCGCATA-1 CTAGTTACGAAACA-1 CTATAAGATCGTTT-1 
#>           "0221"             "01"             "01"            "032"             "04" 
#> CTATACTGAGGTTC-1 CTATACTGCCAGTA-1 CTATACTGCGCTAA-1 CTATACTGCTACGA-1 CTATACTGTCTCAT-1 
#>           "0211"             "01"           "0211"            "032"            "032" 
#> CTATACTGTTCGTT-1 CTATAGCTGTCACA-1 CTATAGCTTCGCTC-1 CTATAGCTTGCCTC-1 CTATCAACGAACTC-1 
#>             "01"             "01"           "0212"           "0212"             "01" 
#> CTATCAACGCAGAG-1 CTATCAACTTTGGG-1 CTATCCCTCCACCT-1 CTATGTACGAGAGC-1 CTATGTACGCTTAG-1 
#>             "01"             "01"           "0212"             "01"             "01" 
#> CTATGTACTGTTTC-1 CTATGTTGAAAGCA-1 CTATGTTGTCCTCG-1 CTATGTTGTCTCGC-1 CTATTGACAAACGA-1 
#>             "04"             "01"             "01"             "01"           "0211" 
#> CTATTGACACTGGT-1 CTATTGACGGTGAG-1 CTATTGTGGCAAGG-1 CTCAATTGGTTCAG-1 CTCAATTGGTTGCA-1 
#>           "0222"           "0222"             "01"             "01"           "0212" 
#> CTCAGAGATAGAAG-1 CTCAGCACTCTAGG-1 CTCAGCACTGAACC-1 CTCAGCACTTGCAG-1 CTCAGCTGAACCTG-1 
#>             "01"             "01"           "0211"             "01"           "0212" 
#> CTCAGCTGCAGTTG-1 CTCAGGCTCGTTGA-1 CTCAGGCTGCTAAC-1 CTCATTGACCTTAT-1 CTCATTGATGCTTT-1 
#>             "01"           "0221"             "01"             "01"           "0222" 
#> CTCCACGAGAGATA-1 CTCCATCTCTTAGG-1 CTCCATCTGACGAG-1 CTCCGAACAAGTGA-1 CTCCTACTGCCTTC-1 
#>           "0222"             "01"             "01"           "0221"           "0211" 
#> CTCGAAGATGTGGT-1 CTCGAAGATTAGGC-1 CTCGACTGCTCTAT-1 CTCGACTGGGTGAG-1 CTCGACTGGTTGAC-1 
#>             "01"           "0212"             "01"             "01"            "032" 
#> CTCGAGCTCTGGAT-1 CTCGCATGACTTTC-1 CTCGCATGCTTAGG-1 CTCTAAACCTCGAA-1 CTCTAAACGGCGAA-1 
#>            "032"             "01"             "01"             "01"             "01" 
#> CTCTAATGTCCAAG-1 CTGAACGACAGTCA-1 CTGAACGATGAGGG-1 CTGAAGACCCAACA-1 CTGAAGACGTGCAT-1 
#>           "0212"             "01"             "01"             "01"             "04" 
#> CTGAAGTGAAGCCT-1 CTGAAGTGCAGCTA-1 CTGAAGTGGCTATG-1 CTGAAGTGTCCAGA-1 CTGAATCTGAATAG-1 
#>           "0221"             "04"             "01"             "01"             "01" 
#> CTGACAGAATCGTG-1 CTGACCACAGCAAA-1 CTGAGAACCGGGAA-1 CTGAGAACGTAAAG-1 CTGATACTAGTAGA-1 
#>            "031"             "01"             "01"            "032"             "01" 
#> CTGATTTGGTGTTG-1 CTGCAGCTAACCGT-1 CTGCAGCTGACACT-1 CTGCAGCTGGATTC-1 CTGCAGCTTGGCAT-1 
#>           "0222"             "01"             "01"           "0222"             "01" 
#> CTGCCAACAGGAGC-1 CTGCCAACCAGCTA-1 CTGCCAACTAACCG-1 CTGCCAACTGCTCC-1 CTGCCAACTTGCAG-1 
#>             "01"             "01"           "0212"            "031"             "01" 
#> CTGCCAACTTGCTT-1 CTGCGACTCCACCT-1 CTGGAAACAAACGA-1 CTGGAAACATCGAC-1 CTGGATGACTGGAT-1 
#>             "01"            "031"            "031"             "01"            "031" 
#> CTGGATGACTTGTT-1 CTGGATGATGTGAC-1 CTGGCACTCAAGCT-1 CTGTAACTAACCAC-1 CTGTAACTAGCGTT-1 
#>             "01"             "04"           "0212"             "01"             "01" 
#> CTGTATACGTAAAG-1 CTGTATACGTACGT-1 CTGTATACGTTGGT-1 CTGTGAGACAACCA-1 CTGTGAGACCTTGC-1 
#>             "01"           "0222"             "01"           "0221"            "031" 
#> CTGTGAGACGAACT-1 CTGTGAGACTGTAG-1 CTTAAAGAACCTGA-1 CTTAACACCTGTAG-1 CTTAACACTATCGG-1 
#>           "0212"           "0212"             "01"             "01"             "04" 
#> CTTAAGCTACCTAG-1 CTTAAGCTAGTACC-1 CTTAAGCTCATCAG-1 CTTAAGCTCCGCTT-1 CTTACAACTAACGC-1 
#>             "01"             "01"             "01"             "04"             "01" 
#> CTTACAACTCCCGT-1 CTTACTGACGTACA-1 CTTAGACTAAACGA-1 CTTAGGGACTTGCC-1 CTTAGGGAGAATCC-1 
#>           "0211"             "01"             "01"             "01"             "01" 
#> CTTATCGACTCATT-1 CTTCACCTACCTGA-1 CTTCATGAAGCATC-1 CTTCATGAAGTACC-1 CTTCATGACCGAAT-1 
#>             "01"           "0221"             "04"             "01"             "01" 
#> CTTGAACTACGCAT-1 CTTGATTGAGGTTC-1 CTTGATTGATCTTC-1 CTTGATTGCATTCT-1 CTTGATTGTTTCGT-1 
#>             "01"            "031"           "0212"             "01"             "01" 
#> CTTGTATGACACCA-1 CTTGTATGCGCAAT-1 CTTTACGAGCGAAG-1 CTTTAGACCGTGAT-1 CTTTAGACGAGACG-1 
#>             "04"             "04"             "01"             "01"             "01" 
#> CTTTAGACGATACC-1 CTTTAGACGTTGGT-1 CTTTAGACTCATTC-1 CTTTAGTGACGGGA-1 CTTTAGTGGGTGGA-1 
#>             "01"             "01"             "01"            "032"             "01" 
#> CTTTCAGAGAAACA-1 CTTTGATGAGCACT-1 CTTTGATGTCTAGG-1 CTTTGATGTGTCCC-1 CTTTGATGTGTGGT-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> GAAACAGAACTACG-1 GAAACAGAATCACG-1 GAAACAGACATTCT-1 GAAACCTGATCGTG-1 GAAACCTGATGCCA-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> GAAACCTGCTTATC-1 GAAACCTGGACTAC-1 GAAACCTGTGCTAG-1 GAAAGATGATTTCC-1 GAAAGATGCTGATG-1 
#>             "01"           "0221"             "01"             "01"           "0221" 
#> GAAAGATGCTTCGC-1 GAAAGATGTAAGGA-1 GAAAGCCTACGTTG-1 GAAAGTGAAAGTGA-1 GAAAGTGACCACAA-1 
#>           "0212"             "01"             "04"           "0222"           "0212" 
#> GAAAGTGACTCAAG-1 GAAATACTACCAAC-1 GAAATACTCTTAGG-1 GAAATACTTCCTCG-1 GAACACACGTGCAT-1 
#>             "01"           "0211"             "04"            "031"           "0222" 
#> GAACACACTGCCTC-1 GAACAGCTAACTGC-1 GAACAGCTCTCAGA-1 GAACCAACCACAAC-1 GAACCAACTTCCGC-1 
#>             "01"           "0221"           "0221"             "01"            "032" 
#> GAACCTGAACGTGT-1 GAACCTGAGAGACG-1 GAACCTGATGAACC-1 GAACGGGATACTTC-1 GAACTGTGACCTGA-1 
#>             "01"             "01"             "01"             "01"           "0221" 
#> GAACTGTGCCAGTA-1 GAAGAATGCAATCG-1 GAAGCGGACCTATT-1 GAAGCTACGAATGA-1 GAAGCTACGGTTTG-1 
#>           "0212"             "01"           "0222"           "0222"            "031" 
#> GAAGGGTGAAAGTG-1 GAAGGGTGCTTAGG-1 GAAGGTCTGAAAGT-1 GAAGGTCTGTTGCA-1 GAAGGTCTTAAAGG-1 
#>             "01"           "0212"            "031"             "01"           "0222" 
#> GAAGTAGACTCCCA-1 GAAGTAGATCCAAG-1 GAAGTCACCCTCGT-1 GAAGTCACCCTGTC-1 GAAGTCTGTCGCAA-1 
#>            "031"           "0221"           "0211"             "04"             "04" 
#> GAAGTCTGTTCTGT-1 GAAGTGCTAAACGA-1 GAAGTGCTCCGCTT-1 GAAGTGCTTAACCG-1 GAATGCACCCTAAG-1 
#>             "01"            "032"           "0222"             "01"             "01" 
#> GAATGCACCTTCGC-1 GAATGCTGCGGTAT-1 GAATTAACGATAAG-1 GAATTAACGGTCAT-1 GAATTAACGTCGTA-1 
#>            "032"             "01"             "01"             "01"            "032" 
#> GAATTAACTGAAGA-1 GACAACACAGGCGA-1 GACAACACATCGTG-1 GACAACACTCGCCT-1 GACAACTGAGGTTC-1 
#>             "04"             "01"             "01"             "01"             "01" 
#> GACAGGGAAGAGTA-1 GACAGGGAATGCCA-1 GACAGTACGAGCTT-1 GACAGTACTTCGGA-1 GACAGTTGAGTAGA-1 
#>             "04"             "01"           "0221"           "0221"             "04" 
#> GACATTCTCCACCT-1 GACCAAACGACTAC-1 GACCAAACGTATCG-1 GACCCTACTAAAGG-1 GACCTAGACCTCAC-1 
#>           "0222"           "0211"           "0212"             "04"             "01" 
#> GACCTAGACGAGAG-1 GACCTCACAAGGTA-1 GACCTCACGTACGT-1 GACCTCTGCATCAG-1 GACGAACTCCCACT-1 
#>             "01"             "01"           "0222"             "01"             "01" 
#> GACGATTGCCAATG-1 GACGCCGACCTTCG-1 GACGCTCTCTCTCG-1 GACGGCACACGGGA-1 GACGGCACGAGATA-1 
#>             "04"             "01"            "032"            "032"           "0222" 
#> GACGTAACCTATGG-1 GACGTAACCTGTGA-1 GACGTAACTATGGC-1 GACGTATGTTGACG-1 GACGTATGTTTGCT-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> GACGTCCTACGGAG-1 GACGTCCTCTCAAG-1 GACGTCCTGATAAG-1 GACTACGATGGTCA-1 GACTCCTGCTCGCT-1 
#>             "01"           "0212"             "04"             "04"             "01" 
#> GACTCCTGGGTTAC-1 GACTCCTGTTATCC-1 GACTCCTGTTGGTG-1 GACTGAACCAATCG-1 GACTGATGTGATGC-1 
#>             "01"             "01"           "0212"           "0212"             "01" 
#> GACTTTACATGCCA-1 GACTTTACGACAGG-1 GAGAAATGTTCTCA-1 GAGATAGAAAAAGC-1 GAGATCACGACAAA-1 
#>             "01"             "04"             "04"           "0222"           "0221" 
#> GAGATGCTCTGGAT-1 GAGATGCTGAATGA-1 GAGCAGGATTCCCG-1 GAGCATACTTTGCT-1 GAGCGCACGCGTAT-1 
#>            "031"             "01"            "031"           "0221"           "0211" 
#> GAGCGCACGGTGAG-1 GAGCGCTGAAGATG-1 GAGCGCTGTCTTAC-1 GAGCGGCTGGGAGT-1 GAGGACGACTCAGA-1 
#>             "01"            "032"           "0211"             "04"             "01" 
#> GAGGATCTGAAAGT-1 GAGGCAGACTTGCC-1 GAGGGAACACCAGT-1 GAGGGAACGAGGGT-1 GAGGGATGGGAAAT-1 
#>             "04"            "031"             "01"             "01"             "01" 
#> GAGGGCCTTCACCC-1 GAGGGTGAAGAGTA-1 GAGGTACTACGGTT-1 GAGGTACTACTCAG-1 GAGGTACTGACACT-1 
#>             "01"             "01"             "01"           "0212"            "032" 
#> GAGGTACTGGGAGT-1 GAGGTACTTAGCGT-1 GAGGTGGAGTACGT-1 GAGGTGGATCCTCG-1 GAGGTTACTCGTTT-1 
#>             "01"           "0222"             "01"            "032"           "0222" 
#> GAGGTTTGTAAGCC-1 GAGTCAACCATTCT-1 GAGTCAACGGGAGT-1 GAGTCTGATCGTGA-1 GAGTCTGATTTGGG-1 
#>           "0211"             "01"             "01"             "01"             "04" 
#> GAGTGACTCAGCTA-1 GAGTGACTCGGTAT-1 GAGTGACTCTTGCC-1 GAGTGACTGACTAC-1 GAGTGACTGTCTAG-1 
#>            "031"            "031"             "04"             "04"             "01" 
#> GAGTGGGAGTCTTT-1 GAGTGGGATGCCCT-1 GAGTGGGATGCTGA-1 GAGTGTTGCTGTAG-1 GAGTGTTGTGGTCA-1 
#>             "04"             "01"             "04"             "01"             "01" 
#> GAGTTGTGCATGGT-1 GAGTTGTGCTGAGT-1 GAGTTGTGGCGAGA-1 GAGTTGTGGTAGCT-1 GAGTTGTGTATGCG-1 
#>           "0211"            "031"           "0211"            "032"           "0221" 
#> GATAAGGAGAAACA-1 GATAAGGATTCACT-1 GATACTCTATCGGT-1 GATACTCTTACTTC-1 GATACTCTTGACTG-1 
#>           "0211"           "0212"             "01"             "01"           "0212" 
#> GATAGAGAAGGGTG-1 GATAGAGACTGTGA-1 GATAGAGATCACGA-1 GATAGCACCCATAG-1 GATAGCACGAAGGC-1 
#>            "031"             "01"           "0212"             "01"           "0222" 
#> GATAGCACTTGTCT-1 GATATAACAAGGTA-1 GATATAACACGCAT-1 GATATATGCTGGAT-1 GATATATGTCCGTC-1 
#>             "01"             "01"             "01"             "01"            "031" 
#> GATATATGTGGAGG-1 GATATCCTAGAAGT-1 GATATCCTCCCGTT-1 GATATTGACAGGAG-1 GATATTGACGAGTT-1 
#>           "0212"             "01"           "0211"            "031"           "0221" 
#> GATATTGAGCCAAT-1 GATCCCTGACCTTT-1 GATCCCTGTGTAGC-1 GATCCGCTGGTCAT-1 GATCGAACCGAGAG-1 
#>             "01"            "032"            "031"           "0212"             "01" 
#> GATCGATGACTAGC-1 GATCGATGGTAAAG-1 GATCGATGTAAGGA-1 GATCGTGACACTAG-1 GATCGTGATTCACT-1 
#>             "04"             "04"           "0212"             "01"             "01" 
#> GATCTACTGGTGAG-1 GATCTACTTTGCAG-1 GATCTTACACCCAA-1 GATCTTACCCTACC-1 GATCTTACGAATAG-1 
#>             "01"             "04"           "0221"             "01"           "0211" 
#> GATCTTACGAGATA-1 GATGCAACTCCAGA-1 GATGCCCTACGTAC-1 GATGCCCTCTCATT-1 GATGCCCTGGCAAG-1 
#>           "0212"             "01"             "01"             "01"           "0212" 
#> GATGCCCTTTTGCT-1 GATTACCTTGTTCT-1 GATTCGGAACGACT-1 GATTCGGACAGGAG-1 GATTCGGAGAAGGC-1 
#>             "01"             "01"             "01"           "0222"           "0221" 
#> GATTCTTGATTCGG-1 GATTCTTGCCGATA-1 GATTCTTGCGAGTT-1 GATTGGACCCGTTC-1 GATTGGACGGTGTT-1 
#>           "0222"             "01"             "04"             "04"             "04" 
#> GATTGGACTTTCGT-1 GATTGGTGTGTCAG-1 GATTTAGACACTCC-1 GATTTAGACTAAGC-1 GATTTAGATTCGTT-1 
#>             "04"             "01"           "0221"             "04"           "0211" 
#> GATTTGCTAACGAA-1 GATTTGCTAACGGG-1 GCAACCCTCCTCGT-1 GCAACTGATTGCGA-1 GCAAGACTACTGGT-1 
#>             "01"           "0211"           "0211"             "01"             "01" 
#> GCAAGACTAGGTCT-1 GCAAGACTCCCTTG-1 GCAATCGACTGCAA-1 GCAATCGAGACGTT-1 GCAATCGATCCTTA-1 
#>             "01"             "01"             "01"           "0222"           "0212" 
#> GCAATTCTCGTGTA-1 GCAATTCTTCTCCG-1 GCACAAACAATGCC-1 GCACAAACGGTACT-1 GCACAATGGTGCAT-1 
#>             "01"             "01"             "01"             "01"           "0212" 
#> GCACACCTGTGCTA-1 GCACCACTCATGAC-1 GCACCACTGTTTGG-1 GCACCACTTCCTTA-1 GCACCACTTTCGGA-1 
#>            "032"           "0212"           "0211"            "032"           "0212" 
#> GCACCTACGCGATT-1 GCACCTTGGCTGTA-1 GCACCTTGGGGAGT-1 GCACGGACCAGCTA-1 GCACGGTGACCTCC-1 
#>             "01"             "01"           "0222"             "01"             "01" 
#> GCACGGTGCTATGG-1 GCACTAGAACGGGA-1 GCACTAGAAGATGA-1 GCACTAGACCTTTA-1 GCACTAGACGTAAC-1 
#>           "0222"             "01"             "04"           "0221"             "04" 
#> GCACTAGAGTCGTA-1 GCACTAGATGCAAC-1 GCACTGCTGAGGCA-1 GCAGATACAGCGTT-1 GCAGATACGACGGA-1 
#>            "031"             "01"             "01"             "01"             "01" 
#> GCAGATACGCAGAG-1 GCAGCCGACAGTCA-1 GCAGCGTGCACTCC-1 GCAGCTCTCAATCG-1 GCAGCTCTGTTTCT-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> GCAGGGCTAAGAAC-1 GCAGGGCTAAGGGC-1 GCAGGGCTATCGAC-1 GCAGGGCTTGGGAG-1 GCAGTCCTAACTGC-1 
#>             "01"             "01"            "032"            "031"             "01" 
#> GCAGTCCTCTCTTA-1 GCATCAGATGCGTA-1 GCATGTGACAAGCT-1 GCATTGGAGAAGGC-1 GCCAAAACGAGGCA-1 
#>             "01"             "01"             "01"             "01"            "031" 
#> GCCAAATGATCGAC-1 GCCAACCTACGGTT-1 GCCAACCTCGCCTT-1 GCCACGGAGGCGAA-1 GCCACGGATACTGG-1 
#>             "01"             "01"             "01"           "0211"             "01" 
#> GCCACTACGTCTTT-1 GCCCAACTACCGAT-1 GCCCAACTATGGTC-1 GCCCATACAGCGTT-1 GCCGACGAACTCTT-1 
#>             "01"             "01"            "031"            "031"           "0222" 
#> GCCGAGTGCGTTGA-1 GCCGGAACGAACTC-1 GCCGGAACGTTCTT-1 GCCGGAACTGCACA-1 GCCGGAACTTACTC-1 
#>             "01"            "031"            "032"            "032"             "01" 
#> GCCGTACTACCTGA-1 GCCGTACTGGCAAG-1 GCCTACACAGTTCG-1 GCCTACACCACTGA-1 GCCTACACCTTGAG-1 
#>             "01"           "0211"            "032"           "0221"             "01" 
#> GCCTAGCTACGGAG-1 GCCTAGCTCTATTC-1 GCCTAGCTTCTCAT-1 GCCTAGCTTCTCTA-1 GCCTCAACCATGGT-1 
#>             "04"             "01"             "01"           "0221"             "01" 
#> GCCTCAACTCTTTG-1 GCCTCATGTCTTAC-1 GCCTGACTCTCAAG-1 GCGAAGGAACTCTT-1 GCGAAGGATGCCAA-1 
#>            "031"             "01"           "0212"             "01"             "01" 
#> GCGAGAGAGGGACA-1 GCGAGCACTGTCGA-1 GCGAGCACTTGACG-1 GCGAGCACTTGCTT-1 GCGATATGGTACGT-1 
#>             "01"             "04"             "01"           "0212"             "01" 
#> GCGATATGGTGTTG-1 GCGCACGAAGTCGT-1 GCGCACGACTTTAC-1 GCGCATCTAGGTCT-1 GCGCATCTGGTTAC-1 
#>             "01"             "01"           "0212"             "01"             "01" 
#> GCGCATCTTCGATG-1 GCGCATCTTGCTCC-1 GCGCATCTTTCTAC-1 GCGCGAACGTTCTT-1 GCGCGATGAACGGG-1 
#>             "01"            "032"             "01"             "04"             "01" 
#> GCGCGATGGTGCAT-1 GCGGAGCTCCTGAA-1 GCGGCAACCCGATA-1 GCGGCAACGGAGGT-1 GCGGCAACTGTCGA-1 
#>            "032"             "01"             "01"             "04"           "0211" 
#> GCGTAAACACGGTT-1 GCGTAATGCACCAA-1 GCGTATGAACACCA-1 GCGTATGATGAGAA-1 GCTACAGAAAGGTA-1 
#>           "0222"           "0221"             "01"           "0222"             "01" 
#> GCTACAGAATCTTC-1 GCTACCTGAGAAGT-1 GCTACCTGATCACG-1 GCTACGCTAGAATG-1 GCTACGCTAGCTAC-1 
#>             "04"           "0212"             "01"             "01"             "01" 
#> GCTACGCTCCCTAC-1 GCTAGAACAGAGGC-1 GCTAGAACGGATCT-1 GCTAGAACTCCCGT-1 GCTAGATGAGCTCA-1 
#>             "01"             "04"             "01"             "01"           "0212" 
#> GCTAGATGGCGATT-1 GCTATACTAAGGCG-1 GCTATACTAGCGTT-1 GCTATACTCTCTTA-1 GCTATACTGGACGA-1 
#>            "031"             "01"            "031"             "01"             "01" 
#> GCTCAAGAACCATG-1 GCTCAAGAAGTCAC-1 GCTCAGCTGTCTAG-1 GCTCCATGAGAAGT-1 GCTCCATGCCGAAT-1 
#>           "0222"           "0222"             "01"            "031"             "01" 
#> GCTCGACTCTAGTG-1 GCTGATGAGGTATC-1 GCTTAACTACAGTC-1 GCTTAACTACTGGT-1 GCTTAACTGCTGAT-1 
#>           "0211"           "0212"           "0211"            "031"             "01" 
#> GCTTAACTTAGACC-1 GCTTAACTTCAGTG-1 GGAACACTCACTTT-1 GGAACACTTCAGAC-1 GGAACTACTACTTC-1 
#>           "0211"             "01"           "0211"            "032"             "01" 
#> GGAACTTGAAGGTA-1 GGAACTTGAGAATG-1 GGAACTTGCTCCAC-1 GGAACTTGGGTAGG-1 GGAAGGACATCGGT-1 
#>           "0222"             "01"           "0212"             "04"           "0212" 
#> GGAAGGACCACTAG-1 GGAAGGACGAGGGT-1 GGAAGGACGCGAAG-1 GGAAGGTGGCGAGA-1 GGAATCTGAAGGGC-1 
#>             "01"             "01"             "01"            "032"             "01" 
#> GGAATCTGAGGAGC-1 GGAATCTGCTTAGG-1 GGAATCTGCTTGTT-1 GGAATCTGGGAGGT-1 GGAATGCTTTCTAC-1 
#>             "01"             "04"           "0212"             "01"             "01" 
#> GGACAGGAAAGGGC-1 GGACAGGAGTGCTA-1 GGACAGGATCTCGC-1 GGACCCGAAGCTAC-1 GGACCGTGCTTACT-1 
#>             "01"             "04"             "01"           "0222"           "0212" 
#> GGACCGTGGGAACG-1 GGACCGTGTAACGC-1 GGACCTCTGTAAGA-1 GGACCTCTTTTCTG-1 GGACGAGAGTGTCA-1 
#>           "0222"             "01"           "0211"            "031"           "0211" 
#> GGACGCTGACGCAT-1 GGACGCTGCTAGCA-1 GGACGCTGTCCTCG-1 GGAGAGACGTGAGG-1 GGAGCAGATTCAGG-1 
#>             "01"             "01"            "032"             "01"             "04" 
#> GGAGCCACCTTCTA-1 GGAGCGCTACGCAT-1 GGAGCGCTCCGAAT-1 GGAGGATGCCACCT-1 GGAGGATGGTTGAC-1 
#>             "04"           "0222"             "01"             "01"           "0211" 
#> GGAGGATGTCAGTG-1 GGAGGCCTCGTTGA-1 GGAGGCCTTTCTTG-1 GGAGGTGATACGCA-1 GGAGGTGATCGCTC-1 
#>           "0211"            "032"             "01"             "01"             "01" 
#> GGATACTGCAGCTA-1 GGATACTGTCTAGG-1 GGATAGCTCGTCTC-1 GGATAGCTCTGAAC-1 GGATGTACCAAAGA-1 
#>             "01"             "01"             "01"             "01"             "04" 
#> GGATGTACGCGAAG-1 GGATGTACGTCTTT-1 GGATGTACGTGTCA-1 GGATTTCTAGGTTC-1 GGATTTCTTTGTCT-1 
#>             "01"           "0211"            "031"             "01"           "0222" 
#> GGCAAGGAAAAAGC-1 GGCAAGGAAGAAGT-1 GGCAAGGACTTGGA-1 GGCAAGGAGGACTT-1 GGCAATACGCTAAC-1 
#>            "032"             "01"           "0212"             "01"             "04" 
#> GGCAATACGGCATT-1 GGCAATACGTTTCT-1 GGCACGTGGCTTAG-1 GGCACTCTTTTGTC-1 GGCATATGCTTATC-1 
#>             "01"             "04"           "0221"             "01"            "032" 
#> GGCATATGGGGAGT-1 GGCATATGTGTGAC-1 GGCCACGACAGAGG-1 GGCCAGACTGGTTG-1 GGCCCAGAAAGTAG-1 
#>            "032"             "01"             "01"             "01"           "0212" 
#> GGCCGAACAACGAA-1 GGCCGAACGCAGAG-1 GGCCGAACGTAGGG-1 GGCCGAACTCTAGG-1 GGCCGATGCAGGAG-1 
#>             "01"             "01"             "01"            "032"             "01" 
#> GGCCGATGCCGAAT-1 GGCCGATGTACTCT-1 GGCGACACTGCCCT-1 GGCGACTGCGTAAC-1 GGCGCATGCCTAAG-1 
#>             "01"             "01"            "031"             "01"           "0221" 
#> GGCGCATGCTCCAC-1 GGCGCATGTGGAAA-1 GGCGGACTAGAGGC-1 GGCGGACTAGGAGC-1 GGCGGACTCTGACA-1 
#>             "01"             "01"             "01"            "031"             "01" 
#> GGCGGACTCTTGGA-1 GGCGGACTTACTGG-1 GGCGGACTTGAACC-1 GGCTAAACACCTGA-1 GGCTAAACTCTTAC-1 
#>            "031"             "01"             "01"            "031"             "01" 
#> GGCTAATGAGCACT-1 GGCTAATGGTCTAG-1 GGCTCACTACTCAG-1 GGGAACGAAGCTCA-1 GGGAACGACACAAC-1 
#>            "031"             "01"           "0212"           "0221"             "04" 
#> GGGAACGAGTGTCA-1 GGGAAGTGTTGAGC-1 GGGACCACACGTTG-1 GGGACCACAGAACA-1 GGGACCACGAATAG-1 
#>           "0211"           "0211"            "031"             "01"             "01" 
#> GGGACCACGTCATG-1 GGGACCACTCAAGC-1 GGGACCACTCGTGA-1 GGGACCACTGCATG-1 GGGACCTGACCCTC-1 
#>             "01"             "01"             "01"             "01"           "0212" 
#> GGGACCTGCTTGCC-1 GGGACCTGTGGAGG-1 GGGATGGACGACAT-1 GGGATGGATACTTC-1 GGGATGGATGGTTG-1 
#>             "01"             "04"             "04"             "01"           "0212" 
#> GGGATTACGTCTAG-1 GGGCAAGATGCATG-1 GGGCACACGGTGAG-1 GGGCACACGTTGCA-1 GGGCAGCTTGGGAG-1 
#>             "01"           "0211"           "0221"             "01"             "01" 
#> GGGCAGCTTTTCTG-1 GGGCCAACCTTGGA-1 GGGCCAACGCGTTA-1 GGGCCAACTACGCA-1 GGGCCAACTCCAAG-1 
#>             "01"           "0222"             "04"           "0211"             "04" 
#> GGGCCATGATGGTC-1 GGGCCATGTTGACG-1 GGGTAACTCAGCTA-1 GGGTAACTCTAGTG-1 GGGTAACTCTGGAT-1 
#>             "01"             "01"             "01"             "04"             "01" 
#> GGGTTAACGTGCAT-1 GGTAAAGAGCTAAC-1 GGTACAACTGCAAC-1 GGTACATGAAAGCA-1 GGTACATGAGCTCA-1 
#>            "032"            "031"             "01"             "04"             "01" 
#> GGTACATGCGGTAT-1 GGTACATGGTTACG-1 GGTACATGTGGGAG-1 GGTACTGAACTCTT-1 GGTAGTACACCACA-1 
#>             "01"             "01"             "01"           "0212"             "01" 
#> GGTAGTACACTAGC-1 GGTAGTACCCTGTC-1 GGTAGTACGCCATA-1 GGTAGTACTGTCTT-1 GGTATCGAGACAAA-1 
#>           "0211"             "01"           "0211"             "01"           "0211" 
#> GGTATCGATGAACC-1 GGTCAAACCAAAGA-1 GGTCTAGAGAAACA-1 GGTCTAGATAGCGT-1 GGTGATACCGACTA-1 
#>             "04"             "01"           "0212"           "0222"             "04" 
#> GGTGATACGACTAC-1 GGTGATACTGTTTC-1 GGTGGAGAAACGGG-1 GGTGGAGAAGTAGA-1 GGTGGAGACAGATC-1 
#>           "0212"             "01"            "031"             "01"            "032" 
#> GGTGGAGATCGATG-1 GGTGGAGATCTCTA-1 GGTGGAGATTACTC-1 GGTTTACTACGCAT-1 GTAACGTGACCTCC-1 
#>             "01"           "0211"            "031"            "031"           "0222" 
#> GTAACGTGATCGGT-1 GTAACGTGCAGCTA-1 GTAACGTGGTTGAC-1 GTAAGCACAACGGG-1 GTAAGCACTCATTC-1 
#>             "04"             "04"             "04"             "01"             "04" 
#> GTAAGCTGGTACCA-1 GTAATAACCTTCTA-1 GTAATAACGTTGTG-1 GTACCCTGACAGTC-1 GTACCCTGGAGCTT-1 
#>           "0212"           "0212"             "01"           "0221"             "01" 
#> GTACCCTGTCCTTA-1 GTACCCTGTGAACC-1 GTACGTGAACGTTG-1 GTACTTTGTCGACA-1 GTAGACTGAGATGA-1 
#>            "031"             "01"            "031"             "01"           "0211" 
#> GTAGACTGTATTCC-1 GTAGCAACAGTCGT-1 GTAGCAACCATTTC-1 GTAGCAACGGTAGG-1 GTAGCATGCACTCC-1 
#>             "01"           "0212"             "04"           "0211"             "04" 
#> GTAGCATGTAAGCC-1 GTAGCCCTGACGTT-1 GTAGCTGAAGCTAC-1 GTAGCTGAATTCGG-1 GTAGGTACACGGGA-1 
#>           "0211"             "01"           "0221"             "01"           "0212" 
#> GTAGTGACCTCATT-1 GTAGTGTGAGCGGA-1 GTAGTGTGAGGCGA-1 GTAGTGTGTGGTTG-1 GTATCACTGGTAGG-1 
#>             "01"            "032"           "0211"             "01"           "0212" 
#> GTATCTACAGAAGT-1 GTATCTACGACGAG-1 GTATCTACGTTACG-1 GTATTAGAAACAGA-1 GTATTAGAGGTCTA-1 
#>            "031"            "031"             "01"            "031"             "01" 
#> GTATTCACACAGCT-1 GTATTCACGGGTGA-1 GTCAACGACACTGA-1 GTCAACGAGTGTAC-1 GTCAATCTACACCA-1 
#>             "01"            "031"             "01"           "0212"             "01" 
#> GTCAATCTGTAGCT-1 GTCAATCTTGTGGT-1 GTCACCTGCCTCCA-1 GTCACCTGTCCCGT-1 GTCATACTAATCGC-1 
#>            "031"             "01"             "01"             "01"             "04" 
#> GTCATACTGCGATT-1 GTCATACTTCGCCT-1 GTCATACTTTACCT-1 GTCATACTTTGACG-1 GTCCAAGAAAAACG-1 
#>            "032"            "032"            "031"             "01"             "01" 
#> GTCCACTGACCTCC-1 GTCCACTGGGTACT-1 GTCCAGCTACGGGA-1 GTCCCATGTGGTGT-1 GTCGAATGAAGGCG-1 
#>             "01"           "0221"             "01"           "0222"           "0222" 
#> GTCGACCTGAATGA-1 GTCGACCTGTTCAG-1 GTCGCACTTGAGAA-1 GTCTAACTGGTCTA-1 GTCTAGGAGCTTCC-1 
#>            "032"             "01"             "04"           "0221"           "0212" 
#> GTGAACACACTCTT-1 GTGAACACTCAGGT-1 GTGACCCTTAAGCC-1 GTGATGACAAGTGA-1 GTGATGACCTGAGT-1 
#>             "01"             "01"             "01"             "01"             "04" 
#> GTGATGACGGTTTG-1 GTGATTCTCATTTC-1 GTGATTCTCTCTCG-1 GTGATTCTGGTTCA-1 GTGATTCTGTCGAT-1 
#>             "01"             "01"           "0212"            "032"             "01" 
#> GTGATTCTTAGCGT-1 GTGCCACTCAGGAG-1 GTGGATTGCACTAG-1 GTGGATTGCGGAGA-1 GTGGATTGTAACGC-1 
#>             "04"             "01"           "0221"             "01"             "01" 
#> GTGTACGATCAGTG-1 GTGTAGTGGGTACT-1 GTGTATCTAGCCTA-1 GTGTATCTAGTAGA-1 GTGTATCTGTTACG-1 
#>             "01"             "01"             "04"            "031"             "04" 
#> GTGTCAGAAGCGTT-1 GTTAAAACCGAGAG-1 GTTAAATGCTCGAA-1 GTTAAATGTCGACA-1 GTTAACCTAGCTAC-1 
#>            "031"            "032"             "01"             "04"             "01" 
#> GTTAACCTTGCTTT-1 GTTAGGTGCACTCC-1 GTTAGGTGCCAGTA-1 GTTAGGTGCCCAAA-1 GTTAGGTGGAACTC-1 
#>           "0222"             "01"           "0222"           "0221"             "04" 
#> GTTAGTCTAAGAAC-1 GTTATAGAGGACAG-1 GTTATGCTTTCATC-1 GTTCAACTGGGACA-1 GTTCAACTTATGCG-1 
#>             "01"             "01"             "01"            "032"             "01" 
#> GTTGACGAGCCCTT-1 GTTGACGATATCGG-1 GTTGAGTGGTCTTT-1 GTTGAGTGTGCTTT-1 GTTGATCTGGGACA-1 
#>            "031"            "032"           "0222"             "01"             "01" 
#> GTTGATCTTTTCAC-1 GTTGGATGTTTACC-1 GTTGTACTATTCCT-1 GTTGTACTTTTGGG-1 GTTTAAGACCATGA-1 
#>            "031"           "0221"           "0222"             "01"           "0212" 
#> GTTTAAGACTGTCC-1 TAAACAACCAACCA-1 TAAACAACGAATCC-1 TAAAGACTCAGGAG-1 TAAATCGATGAGGG-1 
#>            "031"             "01"             "04"             "01"             "01" 
#> TAACAATGTGCCCT-1 TAACACCTTCGCTC-1 TAACACCTTCGTAG-1 TAACACCTTGTTTC-1 TAACATGACACTAG-1 
#>             "04"           "0212"           "0222"            "032"             "04" 
#> TAACCGGACTTACT-1 TAACGTCTCAACCA-1 TAACGTCTCATTGG-1 TAACTAGAATTTCC-1 TAACTAGACTTAGG-1 
#>             "01"           "0211"             "01"             "01"             "01" 
#> TAACTAGATCTGGA-1 TAACTCACGAGGAC-1 TAACTCACGTACAC-1 TAACTCACGTATCG-1 TAACTCACTCTACT-1 
#>             "01"           "0211"             "04"           "0212"            "032" 
#> TAAGAACTGTGTCA-1 TAAGAGGACTAAGC-1 TAAGAGGACTTGTT-1 TAAGATACGGTTCA-1 TAAGATTGCGTAGT-1 
#>           "0212"             "04"            "032"           "0211"             "01" 
#> TAAGATTGTTGCTT-1 TAAGCGTGAGGTTC-1 TAAGCGTGGACAAA-1 TAAGCGTGGGAAAT-1 TAAGCGTGTGCTCC-1 
#>             "01"           "0212"           "0222"             "01"           "0221" 
#> TAAGGCTGCCATGA-1 TAAGGCTGCTGCTC-1 TAAGGCTGTCTCGC-1 TAAGGGCTGCTGTA-1 TAAGGGCTTTACTC-1 
#>             "01"             "01"           "0222"            "031"             "01" 
#> TAAGTAACCGAGAG-1 TAAGTAACCTCCAC-1 TAAGTAACCTGTAG-1 TAAGTAACTTGTCT-1 TAATGATGAGCGGA-1 
#>             "04"             "04"             "01"             "01"             "01" 
#> TAATGCCTCATGAC-1 TAATGCCTCGTCTC-1 TAATGTGAAGATGA-1 TAATGTGACTGCAA-1 TAATGTGATTACTC-1 
#>             "01"            "032"             "01"           "0222"             "01" 
#> TACAAATGGGTACT-1 TACAATGAAAACAG-1 TACAATGACTTAGG-1 TACAATGATGCTAG-1 TACACACTCACACA-1 
#>             "01"           "0212"             "01"             "01"             "01" 
#> TACACACTCTTACT-1 TACATAGAACGCAT-1 TACATCACACGGGA-1 TACATCACCTGTTT-1 TACATCACGCTAAC-1 
#>             "01"             "01"             "01"           "0221"             "04" 
#> TACATCACTGAACC-1 TACCATTGAGGTTC-1 TACCATTGCGGGAA-1 TACCATTGGGGATG-1 TACCATTGTGAGGG-1 
#>           "0221"             "01"           "0211"           "0211"           "0212" 
#> TACCGGCTGTTGGT-1 TACGAGTGATCTCT-1 TACGAGTGATGCTG-1 TACGAGTGCGGAGA-1 TACGAGTGGTTGGT-1 
#>             "01"             "01"           "0222"             "01"             "01" 
#> TACGATCTAGTGTC-1 TACGATCTCACTGA-1 TACGATCTTACGAC-1 TACGCAGAGAATCC-1 TACGCCACATTCCT-1 
#>             "01"           "0222"            "031"            "031"             "01" 
#> TACGCCACTCCCAC-1 TACGCCACTCCGAA-1 TACGGAACGCGTTA-1 TACGGCCTGGGACA-1 TACGTACTACGGAG-1 
#>           "0221"             "04"             "04"            "032"             "01" 
#> TACGTACTCAGTTG-1 TACGTACTCCCGTT-1 TACGTTACAGAAGT-1 TACGTTACCAAGCT-1 TACTAAGAAAGGTA-1 
#>             "01"             "04"             "01"           "0211"             "04" 
#> TACTAAGAATCACG-1 TACTAAGATGATGC-1 TACTAAGATTGCGA-1 TACTACACGAGAGC-1 TACTACACTTACCT-1 
#>             "01"           "0212"             "01"             "01"             "04" 
#> TACTACTGAACCTG-1 TACTACTGATGTCG-1 TACTACTGATTCTC-1 TACTACTGTATGGC-1 TACTCAACGGTCTA-1 
#>           "0212"            "032"             "01"             "01"           "0212" 
#> TACTCAACTGCTAG-1 TACTCCCTCAGTTG-1 TACTCTGAATCGAC-1 TACTCTGACGAGTT-1 TACTCTGATTGACG-1 
#>             "04"             "01"            "032"             "01"             "04" 
#> TACTGGGATCGATG-1 TACTGTTGAAAGCA-1 TACTGTTGAGGCGA-1 TACTGTTGCTGAAC-1 TACTTGACTCCTCG-1 
#>             "01"             "01"            "032"             "04"            "031" 
#> TACTTGACTGGTGT-1 TACTTTCTTTTGGG-1 TAGAAACTAATCGC-1 TAGAAACTGCTTCC-1 TAGAAACTGGGATG-1 
#>             "04"             "01"             "01"           "0212"            "032" 
#> TAGAATTGCGACAT-1 TAGAATTGTATCGG-1 TAGACGTGCTTGAG-1 TAGACGTGTCGCTC-1 TAGAGCACCTTACT-1 
#>             "01"             "01"             "01"             "01"             "04" 
#> TAGATTGACTTGTT-1 TAGATTGAGGCATT-1 TAGCATCTCAGCTA-1 TAGCATCTCCCTCA-1 TAGCATCTGCTGTA-1 
#>             "04"             "01"            "032"             "01"           "0221" 
#> TAGCATCTGGGACA-1 TAGCATCTTGTCGA-1 TAGCCCACAAAAGC-1 TAGCCCACAGCCAT-1 TAGCCCACAGCTAC-1 
#>             "01"             "01"             "01"            "031"            "032" 
#> TAGCCCACCCACAA-1 TAGCCCTGCGGAGA-1 TAGCCGCTTACGAC-1 TAGCCGCTTACTTC-1 TAGCCGCTTTCCAT-1 
#>             "01"             "01"             "01"            "031"           "0222" 
#> TAGCTACTGAATAG-1 TAGCTACTGTAGCT-1 TAGCTACTTTTGCT-1 TAGGACTGTGCTGA-1 TAGGAGCTAAGGCG-1 
#>             "04"             "01"             "01"             "01"             "04" 
#> TAGGAGCTGAGGGT-1 TAGGAGCTTGCATG-1 TAGGCAACCGTCTC-1 TAGGCATGCTCTCG-1 TAGGCATGGCGAGA-1 
#>             "01"             "04"             "04"            "032"            "031" 
#> TAGGCTGATGCCTC-1 TAGGGACTGAACTC-1 TAGGTCGACACTGA-1 TAGGTCGAGGATCT-1 TAGGTGACACACTG-1 
#>           "0212"            "032"             "01"             "04"             "01" 
#> TAGGTGACACGTTG-1 TAGGTGTGTTCTGT-1 TAGGTTCTGAAGGC-1 TAGGTTCTTCTTAC-1 TAGGTTCTTGCTGA-1 
#>             "04"            "031"             "01"           "0221"           "0212" 
#> TAGTAAACCTCGCT-1 TAGTAAACGTCACA-1 TAGTAATGAGATCC-1 TAGTACCTAAGAAC-1 TAGTATGATCTTAC-1 
#>             "01"             "01"             "01"           "0212"             "04" 
#> TAGTATGATTCTCA-1 TAGTCTTGGCTGTA-1 TAGTCTTGGGACTT-1 TAGTCTTGTGGAAA-1 TAGTGGTGAAGTGA-1 
#>             "01"             "01"             "01"            "031"            "032" 
#> TAGTTAGAACCACA-1 TAGTTAGATGAACC-1 TATAAGACAACAGA-1 TATAAGACAGCTCA-1 TATAAGTGACACCA-1 
#>            "032"             "01"             "01"           "0221"           "0221" 
#> TATAAGTGTATCGG-1 TATAAGTGTGGTGT-1 TATACAGAACCCTC-1 TATACAGAAGAACA-1 TATACAGATCCAGA-1 
#>           "0211"           "0221"             "01"             "01"             "01" 
#> TATACCACCTGATG-1 TATACGCTACCAAC-1 TATAGATGGACGGA-1 TATAGATGTTCCGC-1 TATCCAACCAGCTA-1 
#>             "04"             "01"             "01"           "0221"           "0211" 
#> TATCCAACTCTCTA-1 TATCGACTACTAGC-1 TATCGACTCGATAC-1 TATCGTACAGATGA-1 TATCGTACATTCCT-1 
#>            "031"             "01"           "0221"             "01"           "0212" 
#> TATCTCGAGAGATA-1 TATCTGACAGGTTC-1 TATCTGACTGTTTC-1 TATCTTCTAAACAG-1 TATGAATGGAGGAC-1 
#>             "01"            "031"             "01"             "01"            "032" 
#> TATGAATGTTTGCT-1 TATGCGGATAACCG-1 TATGGGTGCATCAG-1 TATGGGTGCTAGCA-1 TATGGTCTCTACCC-1 
#>           "0221"             "01"            "032"             "04"             "01" 
#> TATGTCACGGAACG-1 TATGTCACTAACCG-1 TATGTCACTTCTCA-1 TATGTGCTCCGATA-1 TATGTGCTGGATTC-1 
#>             "04"           "0222"             "04"           "0212"             "01" 
#> TATTGCTGAAGAAC-1 TATTGCTGCCGTTC-1 TATTGCTGTCTGGA-1 TATTGCTGTGCACA-1 TATTTCCTATTGGC-1 
#>           "0211"             "04"             "01"             "01"           "0211" 
#> TATTTCCTGGAGGT-1 TATTTCCTGGTGTT-1 TCAACACTGTTTGG-1 TCAAGGACAGCGTT-1 TCAAGGACATTCTC-1 
#>            "032"             "01"            "032"             "01"            "031" 
#> TCAAGGACGGTGTT-1 TCAATCACACTCTT-1 TCAATCACAGTCGT-1 TCACAACTATGTGC-1 TCACAACTTTGCTT-1 
#>           "0212"            "031"           "0221"             "01"           "0211" 
#> TCACATACACTTTC-1 TCACATACAGGGTG-1 TCACCCGAGACGGA-1 TCACCGTGCTCGCT-1 TCACCTCTACGACT-1 
#>             "01"             "01"           "0222"           "0221"            "031" 
#> TCACCTCTTCCAAG-1 TCACGAGAGGAGGT-1 TCACTATGGGGCAA-1 TCACTATGGTTGTG-1 TCAGACGACGCTAA-1 
#>           "0221"             "04"            "031"             "04"             "01" 
#> TCAGACGACGTTAG-1 TCAGAGACTCCAGA-1 TCAGCAGACTCCAC-1 TCAGCGCTCTAGTG-1 TCAGCGCTGGATCT-1 
#>            "032"             "01"             "01"             "01"             "04" 
#> TCAGCGCTGGTATC-1 TCAGGATGAAGTAG-1 TCAGGATGCCTTTA-1 TCAGTGGAAGATCC-1 TCAGTTACCTACGA-1 
#>             "01"             "01"           "0221"            "031"           "0212" 
#> TCAGTTACTAGAAG-1 TCATCAACCCGATA-1 TCATCAACTGTTCT-1 TCATCATGCAGTTG-1 TCATCCCTTACTGG-1 
#>             "01"             "01"           "0222"             "01"             "01" 
#> TCATTCGATACAGC-1 TCCACGTGGAAACA-1 TCCACTCTACACTG-1 TCCACTCTGAGCTT-1 TCCACTCTTACTTC-1 
#>           "0221"             "01"             "01"           "0212"             "04" 
#> TCCATAACAAAGTG-1 TCCATAACCGTAGT-1 TCCATAACGATGAA-1 TCCATAACTACGCA-1 TCCATCCTCCCTAC-1 
#>             "01"             "04"             "01"             "01"            "031" 
#> TCCCACGATCATTC-1 TCCCATCTCAAAGA-1 TCCCGAACACAGTC-1 TCCCGAACTTCGCC-1 TCCCGATGAGATCC-1 
#>             "01"           "0212"            "032"           "0221"             "01" 
#> TCCCGATGCCTGAA-1 TCCCTACTCAACTG-1 TCCGAAGACAATCG-1 TCCGAAGACGTTAG-1 TCCGGACTGAGGTG-1 
#>           "0211"             "04"           "0211"             "01"             "01" 
#> TCCGGACTGTACGT-1 TCCTAAACATCGAC-1 TCCTAAACCGAGAG-1 TCCTAAACCGCATA-1 TCCTAATGGTTTGG-1 
#>             "01"             "01"             "01"            "032"            "031" 
#> TCCTACCTGTCGTA-1 TCCTATGAAAAGCA-1 TCGAATCTCTGGTA-1 TCGACCTGCCGATA-1 TCGACGCTTCTATC-1 
#>             "01"            "031"            "031"           "0221"           "0212" 
#> TCGACGCTTTGACG-1 TCGAGAACGACAGG-1 TCGAGAACGTTAGC-1 TCGAGCCTATCAGC-1 TCGAGCCTGCGAGA-1 
#>             "01"             "01"            "031"             "04"             "01" 
#> TCGAGCCTTGTGAC-1 TCGATACTATTCCT-1 TCGATACTTGCACA-1 TCGATTTGATGCCA-1 TCGATTTGCACTCC-1 
#>             "01"             "01"             "01"           "0212"             "01" 
#> TCGATTTGCAGCTA-1 TCGATTTGCCTACC-1 TCGATTTGTCGTGA-1 TCGCAGCTAGATCC-1 TCGCCATGAGACTC-1 
#>            "032"           "0212"             "04"             "01"             "01" 
#> TCGCCATGTGGTCA-1 TCGGACCTAACAGA-1 TCGGACCTATAAGG-1 TCGGACCTGTACAC-1 TCGGTAGAGTAGGG-1 
#>             "04"             "01"             "04"             "01"             "01" 
#> TCGGTAGATCCCAC-1 TCGTAGGATCGACA-1 TCGTTATGGACAAA-1 TCTAACACCAGTTG-1 TCTAACACGAGCAG-1 
#>             "04"             "01"             "01"            "032"           "0222" 
#> TCTAACTGAACCAC-1 TCTAAGCTAATGCC-1 TCTAAGCTTAGTCG-1 TCTAAGCTTCTAGG-1 TCTAAGCTTGTTCT-1 
#>             "01"             "01"            "031"           "0221"           "0212" 
#> TCTAAGCTTTCGCC-1 TCTACAACGACTAC-1 TCTAGACTTAGAAG-1 TCTAGTTGCACCAA-1 TCTATGTGAAGAGT-1 
#>             "04"           "0222"           "0211"           "0222"           "0211" 
#> TCTATGTGAGTCTG-1 TCTCAAACCTAAGC-1 TCTCTAGAATTTCC-1 TCTGATACACGTGT-1 TCTGATACTCGCCT-1 
#>             "01"             "04"             "01"             "01"             "01" 
#> TCTTACGAACCTGA-1 TCTTCAGAGCTACA-1 TCTTGATGCGGAGA-1 TGAAATTGGTGAGG-1 TGAACCGAAAACGA-1 
#>           "0212"           "0222"             "01"           "0212"             "01" 
#> TGAACCGACTACTT-1 TGAACCGATTCGGA-1 TGAAGCACTCACGA-1 TGAAGCTGAACGAA-1 TGAAGCTGCATGGT-1 
#>           "0221"           "0221"             "01"             "01"             "04" 
#> TGAAGCTGCGTAAC-1 TGAATAACCACTTT-1 TGAATAACTCCCAC-1 TGACACGACCTTAT-1 TGACCAGACAACCA-1 
#>             "01"             "01"            "032"             "04"             "01" 
#> TGACCAGAGGATTC-1 TGACCGCTAAAAGC-1 TGACCGCTCTGCAA-1 TGACGATGCAAAGA-1 TGACGCCTGTACCA-1 
#>             "01"             "01"             "01"           "0212"             "01" 
#> TGACGCCTTTACTC-1 TGACTGGAAGAGAT-1 TGACTGGACCGTAA-1 TGACTGGACGCAAT-1 TGACTGGAGGACAG-1 
#>            "031"           "0211"             "01"             "01"             "04" 
#> TGACTGGATTCTCA-1 TGACTTACACACCA-1 TGACTTACAGTCTG-1 TGACTTTGCGCATA-1 TGACTTTGTTTGTC-1 
#>             "01"             "01"           "0222"             "01"             "01" 
#> TGAGACACAAGGTA-1 TGAGACACTCAAGC-1 TGAGCTGAATGCTG-1 TGAGCTGACTGGAT-1 TGAGCTGATGCTAG-1 
#>             "01"             "01"           "0221"           "0212"           "0211" 
#> TGAGGACTCTCATT-1 TGAGGACTTCATTC-1 TGAGGTACGAACCT-1 TGAGTCGAGTTACG-1 TGAGTGACTGAGCT-1 
#>           "0212"             "01"           "0221"             "04"             "01" 
#> TGATAAACGAATCC-1 TGATAAACTCCGTC-1 TGATAAACTTTCAC-1 TGATACCTCACTAG-1 TGATACCTGTTGGT-1 
#>             "01"            "032"             "01"           "0212"             "01" 
#> TGATACCTTATGCG-1 TGATACCTTGAAGA-1 TGATATGAACCTTT-1 TGATCACTAGCATC-1 TGATCACTCTCGCT-1 
#>             "01"             "01"             "01"            "031"             "01" 
#> TGATCACTTCTACT-1 TGATCGGACTGACA-1 TGATCGGAGGAGCA-1 TGATCGGATATGCG-1 TGATTAGACATTGG-1 
#>             "04"           "0221"             "04"           "0221"             "01" 
#> TGATTAGATGACTG-1 TGATTAGATGCTAG-1 TGATTCACTATGCG-1 TGATTCACTGTCAG-1 TGATTCTGCCGAAT-1 
#>             "04"             "01"             "01"             "04"             "01" 
#> TGATTCTGCTCTTA-1 TGCAAGTGAGAACA-1 TGCAAGTGGGTAGG-1 TGCAATCTTCAGGT-1 TGCACAGACGACAT-1 
#>             "01"             "01"           "0212"           "0222"            "032" 
#> TGCCAAGAGCAGTT-1 TGCCAAGATCTCTA-1 TGCCACTGAACGTC-1 TGCCACTGCGATAC-1 TGCCAGCTTGGCAT-1 
#>           "0212"             "01"             "01"            "032"             "01" 
#> TGCCCAACAGCAAA-1 TGCCCAACCGCATA-1 TGCCGACTCTCCCA-1 TGCGAAACAGTCAC-1 TGCGAAACGTTGCA-1 
#>             "01"           "0221"             "04"             "04"             "04" 
#> TGCGATGAACGGTT-1 TGCGATGACCTCGT-1 TGCGATGACTAGTG-1 TGCGATGACTGCTC-1 TGCGATGACTTGCC-1 
#>             "01"             "01"             "04"             "04"             "04" 
#> TGCGATGAGTGCTA-1 TGCGCACTCTTGAG-1 TGCGTAGAATAAGG-1 TGCGTAGACGGGAA-1 TGCGTAGATGGTCA-1 
#>           "0211"           "0211"           "0211"             "04"           "0221" 
#> TGCTAGGAAACCGT-1 TGCTAGGATAGTCG-1 TGCTATACGGTTCA-1 TGCTATACTGCTGA-1 TGCTGAGAGAGCAG-1 
#>            "031"             "01"           "0212"            "031"            "032" 
#> TGCTGAGATTATCC-1 TGGAAAGACTCTCG-1 TGGAAAGAGCGATT-1 TGGAAAGAGGTCAT-1 TGGAAAGATATGGC-1 
#>             "01"             "04"             "01"           "0221"             "01" 
#> TGGAACACAAACAG-1 TGGAACACGCTAAC-1 TGGAAGCTCAGATC-1 TGGACCCTACACTG-1 TGGACCCTCATGGT-1 
#>            "032"             "01"             "01"           "0211"             "01" 
#> TGGACCCTGGTACT-1 TGGACTGAGTATGC-1 TGGAGACTATCAGC-1 TGGAGACTTCAAGC-1 TGGAGACTTGACCA-1 
#>           "0222"             "01"           "0212"             "01"            "031" 
#> TGGAGGGACGGAGA-1 TGGAGGGAGCTATG-1 TGGATCGATAAAGG-1 TGGATGTGACCTAG-1 TGGATGTGTGAAGA-1 
#>           "0211"             "01"             "01"             "04"             "04" 
#> TGGATTCTCATACG-1 TGGCAATGCTTGTT-1 TGGCACCTTCACGA-1 TGGCACCTTCAGTG-1 TGGGTATGAAGAGT-1 
#>             "01"             "04"             "01"           "0222"             "01" 
#> TGGGTATGCACAAC-1 TGGGTATGGTACGT-1 TGGGTATGTTTGGG-1 TGGTAGACATGCCA-1 TGGTAGACCCTCAC-1 
#>             "01"             "04"           "0211"             "01"            "032" 
#> TGGTAGACCTGATG-1 TGGTAGTGCACTGA-1 TGGTATCTAAACAG-1 TGGTATCTCTTCCG-1 TGGTCAGACCCAAA-1 
#>             "01"           "0211"             "01"             "01"             "01" 
#> TGGTTACTGACGTT-1 TGGTTACTGTTCTT-1 TGTAACCTAGAGGC-1 TGTAACCTTGCCTC-1 TGTAATGACACAAC-1 
#>           "0212"             "01"             "01"           "0222"            "032" 
#> TGTAATGAGGTAAA-1 TGTACTTGCTCTAT-1 TGTAGGTGCGAGAG-1 TGTAGGTGCTATGG-1 TGTAGGTGCTCTAT-1 
#>            "032"           "0221"             "04"             "01"           "0222" 
#> TGTAGGTGTGCTGA-1 TGTAGTCTTCCAGA-1 TGTAGTCTTGCACA-1 TGTATCTGTTAGGC-1 TGTATGCTCATGGT-1 
#>             "01"             "01"            "031"             "01"             "04" 
#> TGTATGCTGTAGGG-1 TGTATGCTTTCATC-1 TGTCAGGAATACCG-1 TGTCAGGAGATGAA-1 TGTCTAACCCCTTG-1 
#>             "01"             "01"             "01"           "0221"             "01" 
#> TGTGACGATTCTCA-1 TGTGAGACTGTCAG-1 TGTGAGACTTGAGC-1 TGTGAGTGACCACA-1 TGTGAGTGAGTGCT-1 
#>            "031"           "0221"             "01"             "01"           "0221" 
#> TGTGAGTGGAGATA-1 TGTGATCTCTCTAT-1 TGTGATCTGACACT-1 TGTGGATGGCCAAT-1 TGTTAAGACAAAGA-1 
#>            "031"             "04"             "01"             "04"           "0211" 
#> TGTTAAGATAAGGA-1 TGTTACACCGCATA-1 TGTTACACGACTAC-1 TGTTACTGGCTACA-1 TGTTACTGTAGTCG-1 
#>           "0211"           "0221"           "0211"            "031"            "031" 
#> TTAACCACCGTAAC-1 TTAACCACTAAGGA-1 TTAACCACTCAGAC-1 TTACACACGTGTTG-1 TTACACACTCCTAT-1 
#>             "01"            "031"             "01"             "01"             "01" 
#> TTACCATGAATCGC-1 TTACCATGGTTGAC-1 TTACCATGTGTCTT-1 TTACCATGTTGTGG-1 TTACGACTGAGAGC-1 
#>           "0211"             "01"            "031"             "04"             "01" 
#> TTACGACTTGACAC-1 TTACGTACGTTCAG-1 TTACTCGAAGAATG-1 TTACTCGACGCAAT-1 TTACTCGAGGGTGA-1 
#>           "0212"            "032"           "0212"           "0222"             "01" 
#> TTACTCGATCTACT-1 TTAGAATGTGGTGT-1 TTAGAATGTGTAGC-1 TTAGACCTCCTACC-1 TTAGACCTCCTTTA-1 
#>            "032"             "01"             "01"             "01"           "0212" 
#> TTAGCTACAACCGT-1 TTAGCTACTGTCCC-1 TTAGCTACTTTCGT-1 TTAGGGACGCGAAG-1 TTAGGGTGCTGGAT-1 
#>             "01"           "0222"             "01"             "01"             "04" 
#> TTAGGGTGTCCTGC-1 TTAGGTCTACTTTC-1 TTAGTCACCAGTTG-1 TTAGTCTGAAAGCA-1 TTAGTCTGCCAACA-1 
#>           "0222"           "0211"             "01"             "04"            "032" 
#> TTAGTCTGTGCACA-1 TTATCCGACTAGTG-1 TTATCCGAGAAAGT-1 TTATGAGAGATAAG-1 TTATGCACGTCACA-1 
#>             "01"             "04"           "0222"             "01"             "04" 
#> TTATGGCTTATGGC-1 TTATTCCTATGCTG-1 TTATTCCTGGACAG-1 TTATTCCTGGTACT-1 TTATTCCTTCGTGA-1 
#>           "0222"           "0222"             "04"             "04"             "01" 
#> TTCAAAGATAAAGG-1 TTCAACACAACAGA-1 TTCAACACCCCAAA-1 TTCAACACGGACGA-1 TTCAAGCTAAGAAC-1 
#>             "01"             "01"           "0212"           "0221"           "0212" 
#> TTCAAGCTAGATGA-1 TTCAAGCTGTTGAC-1 TTCAAGCTTGATGC-1 TTCAAGCTTTCGCC-1 TTCACAACCCGTTC-1 
#>             "01"             "01"             "01"             "01"           "0222" 
#> TTCACAACGTCTGA-1 TTCAGACTACCCAA-1 TTCAGACTCTCGAA-1 TTCAGTACCGACTA-1 TTCAGTACTCAAGC-1 
#>           "0211"             "01"             "01"             "01"             "01" 
#> TTCAGTACTCCTAT-1 TTCAGTTGCCAAGT-1 TTCAGTTGTCCTTA-1 TTCAGTTGTCTAGG-1 TTCAGTTGTCTCGC-1 
#>           "0211"             "01"           "0212"             "01"             "04" 
#> TTCATCGAGGTGGA-1 TTCATGTGTGGTGT-1 TTCATTCTATGTCG-1 TTCATTCTTCTCTA-1 TTCCAAACCTATGG-1 
#>           "0212"             "01"           "0212"             "01"           "0211" 
#> TTCCAAACCTCCCA-1 TTCCAAACTCCCAC-1 TTCCAAACTTGACG-1 TTCCATGACGAGAG-1 TTCCATGACTGTCC-1 
#>             "04"            "032"            "031"           "0212"             "01" 
#> TTCCCACTTGAGGG-1 TTCCCACTTGTCTT-1 TTCCTAGAAAGTGA-1 TTCCTAGACTAGTG-1 TTCGAGGACTCTAT-1 
#>            "032"           "0212"             "01"           "0221"             "01" 
#> TTCGAGGAGGGCAA-1 TTCGAGGATAGAAG-1 TTCGATTGAGCATC-1 TTCGGAGAATGCCA-1 TTCGGAGATGTGCA-1 
#>             "01"           "0221"             "01"           "0211"             "01" 
#> TTCGTATGAAAAGC-1 TTCGTATGGATAGA-1 TTCGTATGGTCTGA-1 TTCGTATGTCCTTA-1 TTCTACGAACGTAC-1 
#>            "031"            "031"             "01"           "0222"             "01" 
#> TTCTACGAGTTGGT-1 TTCTAGTGACACGT-1 TTCTAGTGCATGAC-1 TTCTAGTGGAGAGC-1 TTCTAGTGGTCACA-1 
#>             "01"             "01"           "0212"            "032"           "0222" 
#> TTCTCAGAAGAGAT-1 TTCTCAGAAGCATC-1 TTCTCAGATGGAGG-1 TTCTGATGGAGACG-1 TTCTTACTCTGGAT-1 
#>             "01"             "04"             "01"            "032"           "0221" 
#> TTGAACCTCCTTGC-1 TTGAATGAACTACG-1 TTGAATGACTTACT-1 TTGAATGATCTCAT-1 TTGACACTCTGTAG-1 
#>             "04"           "0221"             "01"             "04"             "01" 
#> TTGACACTGATAAG-1 TTGAGGACAGAACA-1 TTGAGGACTACGCA-1 TTGAGGTGGACGGA-1 TTGCATTGAGCTAC-1 
#>             "04"           "0212"           "0222"             "01"             "01" 
#> TTGCATTGCTAAGC-1 TTGCATTGTGACTG-1 TTGCTAACACCAAC-1 TTGCTAACACGCTA-1 TTGCTAACCACTCC-1 
#>           "0212"             "01"             "01"           "0221"             "01" 
#> TTGCTATGGTACGT-1 TTGCTATGGTAGGG-1 TTGGAGACCAATCG-1 TTGGAGACGCTATG-1 TTGGAGACTATGGC-1 
#>           "0222"           "0221"             "01"           "0212"             "04" 
#> TTGGGAACTGAACC-1 TTGGTACTACTGGT-1 TTGGTACTCTTAGG-1 TTGGTACTGAATCC-1 TTGGTACTGGATTC-1 
#>             "01"           "0222"             "01"             "04"             "04" 
#> TTGTACACGTTGTG-1 TTGTACACTTGCAG-1 TTGTAGCTAGCTCA-1 TTGTAGCTCTCTTA-1 TTGTCATGGACGGA-1 
#>             "04"             "01"             "01"             "04"            "032" 
#> TTTAGAGATCCTCG-1 TTTAGCTGATACCG-1 TTTAGCTGGATACC-1 TTTAGCTGTACTCT-1 TTTAGGCTCCTTTA-1 
#>             "04"             "01"           "0212"           "0212"           "0211" 
#> TTTATCCTGTTGTG-1 TTTCACGAGGTTCA-1 TTTCAGTGGAAGGC-1 TTTCAGTGTCACGA-1 TTTCAGTGTCTATC-1 
#>           "0222"             "01"             "01"             "04"           "0211" 
#> TTTCAGTGTGCAGT-1 TTTCCAGAGGTGAG-1 TTTCGAACACCTGA-1 TTTCGAACTCTCAT-1 TTTCTACTGAGGCA-1 
#>             "04"             "01"             "04"           "0212"             "04" 
#> TTTCTACTTCCTCG-1 TTTGCATGAGAGGC-1 TTTGCATGCCTCAC-1 
#>             "04"             "04"             "01"

show/hide code output

get_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 153))
#> AAACATACAACCAC-1 AAACATTGAGCTAC-1 AAACATTGATCAGC-1 AAACCGTGCTTCCG-1 AAACCGTGTATGCG-1 
#>             "01"             "04"             "01"           "0222"            "032" 
#> AAACGCACTGGTAC-1 AAACGCTGACCAGT-1 AAACGCTGGTTCTT-1 AAACGCTGTAGCCA-1 AAACGCTGTTTCTG-1 
#>             "01"             "01"             "01"            "031"            "021" 
#> AAACTTGAAAAACG-1 AAACTTGATCCAGA-1 AAAGAGACGAGATA-1 AAAGAGACGCGAGA-1 AAAGAGACGGACTT-1 
#>             "04"             "01"             "01"            "021"             "01" 
#> AAAGAGACGGCATT-1 AAAGCAGATATCGG-1 AAAGCCTGTATGCG-1 AAAGGCCTGTCTAG-1 AAAGTTTGATCACG-1 
#>             "01"           "0222"             "01"             "04"             "04" 
#> AAAGTTTGGGGTGA-1 AAAGTTTGTAGAGA-1 AAAGTTTGTAGCGT-1 AAATCAACAATGCC-1 AAATCAACACCAGT-1 
#>             "04"             "01"            "021"             "04"             "01" 
#> AAATCAACCAGGAG-1 AAATCAACCCTATT-1 AAATCAACGGAAGC-1 AAATCAACTCGCAA-1 AAATCATGACCACA-1 
#>             "01"           "0222"             "01"             "01"           "0221" 
#> AAATCCCTCCACAA-1 AAATCCCTGCTATG-1 AAATGTTGAACGAA-1 AAATGTTGCCACAA-1 AAATGTTGTGGCAT-1 
#>             "01"             "04"            "021"            "031"           "0222" 
#> AAATTCGAAGGTTC-1 AAATTCGAATCACG-1 AAATTCGAGCTGAT-1 AAATTCGAGGAGTG-1 AAATTCGATTCTCA-1 
#>             "01"            "021"           "0221"             "01"            "031" 
#> AAATTGACACGACT-1 AAATTGACTCGCTC-1 AACAAACTCATTTC-1 AACAAACTTTCGTT-1 AACAATACGACGAG-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> AACACGTGCAGAGG-1 AACACGTGGAAAGT-1 AACACGTGGAACCT-1 AACACGTGGCTACA-1 AACACGTGTACGAC-1 
#>             "01"             "01"            "021"             "01"           "0221" 
#> AACAGCACAAGAGT-1 AACATTGATGGGAG-1 AACCAGTGATACCG-1 AACCCAGATCGCTC-1 AACCGATGCTCCCA-1 
#>            "021"           "0221"           "0221"             "01"             "01" 
#> AACCGATGGTCATG-1 AACCGATGTTCTAC-1 AACCGCCTAGCGTT-1 AACCGCCTCTACGA-1 AACCTACTGTGAGG-1 
#>             "04"            "021"             "01"           "0222"           "0222" 
#> AACCTACTGTGTTG-1 AACCTTACGAGACG-1 AACCTTACGCGAGA-1 AACCTTACTAACGC-1 AACCTTTGGACGGA-1 
#>             "01"             "01"            "032"           "0221"             "01" 
#> AACCTTTGTACGCA-1 AACGCAACAAGTAG-1 AACGCATGACCCAA-1 AACGCATGCCTTCG-1 AACGCATGTACTTC-1 
#>           "0221"             "01"             "01"             "01"             "01" 
#> AACGCCCTCGGGAA-1 AACGCCCTCGTACA-1 AACGCCCTGGCATT-1 AACGTCGAGTATCG-1 AACGTGTGAAAGCA-1 
#>             "01"            "032"            "031"            "032"             "01" 
#> AACGTGTGGCGGAA-1 AACGTGTGTCCAAG-1 AACGTGTGTGCTTT-1 AACTACCTTAGAGA-1 AACTCACTCAAGCT-1 
#>             "04"             "01"             "01"             "01"            "021" 
#> AACTCACTTGGAGG-1 AACTCGGAAAGTGA-1 AACTCGGAAGGTCT-1 AACTCTTGCAGGAG-1 AACTGTCTCCCTTG-1 
#>            "021"            "031"            "021"             "01"            "021" 
#> AACTTGCTACGCTA-1 AACTTGCTGGGACA-1 AAGAACGAGTGTTG-1 AAGAAGACGTAGGG-1 AAGACAGAAGTCTG-1 
#>             "04"             "01"             "01"             "04"             "04" 
#> AAGACAGAGGATCT-1 AAGACAGATTACCT-1 AAGAGATGGGTAGG-1 AAGATGGAAAACAG-1 AAGATGGAGAACTC-1 
#>             "01"            "021"             "04"             "04"           "0222" 
#> AAGATGGAGATAAG-1 AAGATTACAACCTG-1 AAGATTACAGATCC-1 AAGATTACCCGTTC-1 AAGATTACCGCCTT-1 
#>           "0222"             "01"           "0222"            "021"            "021" 
#> AAGATTACCTCAAG-1 AAGATTACTCCTCG-1 AAGCAAGAGCGAGA-1 AAGCAAGAGCTTAG-1 AAGCAAGAGGTGTT-1 
#>            "032"            "021"             "01"            "031"            "032" 
#> AAGCACTGAGCAAA-1 AAGCACTGCATACG-1 AAGCACTGGTTCTT-1 AAGCCAACGTGTTG-1 AAGCCATGAACTGC-1 
#>             "04"             "01"             "04"             "01"           "0222" 
#> AAGCCATGACACGT-1 AAGCCATGCGTGAT-1 AAGCCATGTCTCGC-1 AAGCCTGACATGCA-1 AAGCCTGACCGAAT-1 
#>            "021"             "01"             "01"             "01"            "021" 
#> AAGCGACTCCTCAC-1 AAGCGACTGTGTCA-1 AAGCGACTTACAGC-1 AAGCGACTTTGACG-1 AAGCGTACGTCTTT-1 
#>           "0222"             "01"             "04"           "0221"             "01" 
#> AAGGCTTGCGAACT-1 AAGGTCACGGTTAC-1 AAGGTCACTGTTTC-1 AAGGTCACTTCCCG-1 AAGGTCTGACAGTC-1 
#>            "031"            "021"             "04"             "01"             "01" 
#> AAGGTCTGCAGATC-1 AAGTAACTCTGAAC-1 AAGTAACTGAGATA-1 AAGTAGGATACAGC-1 AAGTATACCGAACT-1 
#>             "01"            "021"             "04"            "032"             "01" 
#> AAGTCCGACTTGTT-1 AAGTCCGATAGAAG-1 AAGTCTCTAGTCGT-1 AAGTCTCTCGGAGA-1 AAGTGGCTTGGAGG-1 
#>             "01"             "01"             "01"            "031"             "04" 
#> AAGTTCCTCATTCT-1 AAGTTCCTTCTTAC-1 AATAAGCTCGAATC-1 AATAAGCTCGTTGA-1 AATACCCTGGACGA-1 
#>           "0221"             "01"             "01"             "01"             "04" 
#> AATACCCTGGCATT-1 AATACTGAAAGGGC-1 AATACTGAATTGGC-1 AATAGGGAACCCTC-1 AATAGGGAGAATGA-1 
#>             "01"            "031"            "032"             "04"            "031" 
#> AATCAAACTATCGG-1 AATCCGGAATGCTG-1 AATCCTACCGGTAT-1 AATCCTTGACGGGA-1 AATCCTTGGTGAGG-1 
#>             "01"             "04"             "01"            "021"            "032" 
#> AATCGGTGGAACTC-1 AATCGGTGTGCTTT-1 AATCTAGAAAAGTG-1 AATCTAGAATCGGT-1 AATCTCACAGCCTA-1 
#>            "031"             "01"             "01"             "01"           "0222" 
#> AATCTCACTCTAGG-1 AATCTCTGAACAGA-1 AATCTCTGCTTTAC-1 AATGATACACCAAC-1 AATGATACGGTCAT-1 
#>             "01"             "01"            "032"            "031"           "0222" 
#> AATGCGTGACACCA-1 AATGCGTGGACGGA-1 AATGCGTGGCTATG-1 AATGGAGAATCGTG-1 AATGGAGATCCTTA-1 
#>             "04"            "021"             "04"            "021"             "01" 
#> AATGGCTGACACCA-1 AATGGCTGCGTGAT-1 AATGGCTGTAAAGG-1 AATGGCTGTACTCT-1 AATGGCTGTGAAGA-1 
#>             "04"             "01"            "031"            "031"             "01" 
#> AATGTAACGGTGGA-1 AATGTCCTCTTCTA-1 AATGTTGACAGTCA-1 AATGTTGAGTTGAC-1 AATGTTGATCTACT-1 
#>             "01"             "01"             "01"            "021"             "01" 
#> AATTACGAATTCCT-1 AATTACGACTTCTA-1 AATTACGAGTGAGG-1 AATTACGATTGGCA-1 AATTCCTGCTCAGA-1 
#>           "0222"             "01"             "01"             "04"             "04" 
#> AATTGATGTCGCAA-1 AATTGTGACTTGGA-1 ACAAAGGAGGGTGA-1 ACAAATTGATTCTC-1 ACAAATTGCTCAGA-1 
#>           "0221"             "04"             "01"           "0221"            "021" 
#> ACAAATTGTTGCGA-1 ACAACCGAGGGATG-1 ACAACCGAGTTACG-1 ACAAGAGAAGTCGT-1 ACAAGAGACTTATC-1 
#>            "032"            "031"             "01"           "0222"             "01" 
#> ACAAGAGAGTTGAC-1 ACAATCCTAACCGT-1 ACAATCCTTAGCGT-1 ACAATTGACTGACA-1 ACAATTGATGACTG-1 
#>             "04"             "01"             "04"            "031"            "032" 
#> ACACAGACCATACG-1 ACACCAGAGGGCAA-1 ACACCCTGGTGTTG-1 ACACGAACAGTTCG-1 ACACGATGACGCAT-1 
#>            "031"             "01"            "032"             "01"            "031" 
#> ACACGATGATGTGC-1 ACACGATGTCGTAG-1 ACACGATGTGGTCA-1 ACAGACACGGCATT-1 ACAGACACGTTGTG-1 
#>            "021"             "01"             "01"            "031"             "01" 
#> ACAGCAACACCTAG-1 ACAGCAACCTCAAG-1 ACAGGTACCCCACT-1 ACAGGTACGCTGTA-1 ACAGGTACTGGTGT-1 
#>            "021"           "0221"             "01"             "01"            "032" 
#> ACAGTCGACCCAAA-1 ACAGTCGACCGATA-1 ACAGTGACTCACCC-1 ACAGTGACTCTATC-1 ACAGTGTGGTCACA-1 
#>             "01"            "031"             "01"             "01"             "01" 
#> ACAGTGTGTTGCGA-1 ACATCACTCTACTT-1 ACATGGTGAAGCCT-1 ACATGGTGCAACCA-1 ACATGGTGCGAGTT-1 
#>            "021"            "021"             "01"             "04"             "01" 
#> ACATTCTGGCATAC-1 ACATTCTGGGAACG-1 ACCAACGACATGCA-1 ACCACAGAAAGTAG-1 ACCACAGAGTTGGT-1 
#>             "01"            "021"             "01"             "01"             "01" 
#> ACCACCTGTGTGCA-1 ACCACGCTACAGCT-1 ACCACGCTACCCAA-1 ACCACGCTGCGAGA-1 ACCACGCTGCTGTA-1 
#>             "01"             "01"            "031"             "01"             "01" 
#> ACCAGCCTGACAGG-1 ACCAGTGAACGGTT-1 ACCAGTGAATACCG-1 ACCAGTGAGGGATG-1 ACCAGTGATGACTG-1 
#>             "01"             "04"           "0221"             "01"            "021" 
#> ACCATTACCTTCTA-1 ACCATTACGAGATA-1 ACCATTTGTCATTC-1 ACCCAAGAACTGTG-1 ACCCAAGAATTCCT-1 
#>             "01"            "031"             "01"            "031"           "0221" 
#> ACCCAAGAGGACAG-1 ACCCAAGATTCACT-1 ACCCACTGCGCCTT-1 ACCCACTGGACAGG-1 ACCCACTGGTTCAG-1 
#>             "01"             "04"            "021"             "01"            "032" 
#> ACCCACTGTCGTAG-1 ACCCAGCTCAGAAA-1 ACCCAGCTGTTAGC-1 ACCCAGCTTGCTTT-1 ACCCGTTGATGACC-1 
#>           "0222"             "01"            "021"             "01"             "04" 
#> ACCCGTTGCTGCAA-1 ACCCGTTGCTTCTA-1 ACCCTCGACCTATT-1 ACCCTCGACGGTAT-1 ACCCTCGATAAGGA-1 
#>             "01"             "01"            "031"             "04"           "0222" 
#> ACCCTCGATCAAGC-1 ACCGTGCTACCAGT-1 ACCGTGCTGGAACG-1 ACCTATTGCTGAGT-1 ACCTATTGTGCCCT-1 
#>            "021"             "01"             "04"             "04"           "0221" 
#> ACCTCCGAGTCCTC-1 ACCTCCGATATGCG-1 ACCTCCGATGCTGA-1 ACCTCGTGAACCAC-1 ACCTGAGATATCGG-1 
#>             "01"             "01"             "01"             "01"            "021" 
#> ACCTGGCTAAGTAG-1 ACCTTTGACTCCCA-1 ACCTTTGAGGAACG-1 ACCTTTGAGGAAGC-1 ACGAACACCTTGTT-1 
#>            "032"           "0222"           "0222"           "0222"            "032" 
#> ACGAACTGGCTATG-1 ACGAAGCTCTCCAC-1 ACGAAGCTCTGAGT-1 ACGACCCTATCTCT-1 ACGACCCTGATGAA-1 
#>           "0221"             "01"             "04"           "0222"             "01" 
#> ACGACCCTTGACAC-1 ACGACCCTTGACCA-1 ACGAGGGACAGGAG-1 ACGAGGGACGAACT-1 ACGAGGGATGTAGC-1 
#>             "04"             "01"           "0222"             "01"             "01" 
#> ACGAGTACCCTAAG-1 ACGAGTACGAATCC-1 ACGATCGAGGACTT-1 ACGATCGAGTCACA-1 ACGATGACAATGCC-1 
#>             "04"             "04"            "031"            "021"             "01" 
#> ACGATGACTGGTCA-1 ACGATTCTACGGGA-1 ACGCAATGGTTCAG-1 ACGCACCTGTTAGC-1 ACGCCACTGAACTC-1 
#>             "01"            "031"            "032"             "04"            "021" 
#> ACGCCGGAAACCAC-1 ACGCCGGAAAGCCT-1 ACGCCGGAAATGCC-1 ACGCCTTGCTCCCA-1 ACGCGGTGGCGAGA-1 
#>            "021"             "01"             "01"           "0221"             "01" 
#> ACGCGGTGTGTGGT-1 ACGCGGTGTTTGCT-1 ACGCTCACAGTACC-1 ACGCTCACCCTTGC-1 ACGCTGCTGTTCTT-1 
#>             "04"            "031"             "01"             "01"            "032" 
#> ACGGAACTCAGATC-1 ACGGAACTGTCGTA-1 ACGGAGGACTCTTA-1 ACGGATTGGGAGGT-1 ACGGATTGGTTAGC-1 
#>            "032"           "0221"            "021"             "04"             "01" 
#> ACGGCTCTGAGCAG-1 ACGGCTCTTGCACA-1 ACGGTAACCGCTAA-1 ACGGTAACCTTCGC-1 ACGGTAACGGTGGA-1 
#>             "01"             "01"            "031"            "031"             "01" 
#> ACGGTAACTCGCAA-1 ACGGTATGAGTCGT-1 ACGGTATGGGTATC-1 ACGGTATGGTTGTG-1 ACGGTCCTAACGGG-1 
#>             "01"            "021"             "04"             "04"             "01" 
#> ACGGTCCTCGGGAA-1 ACGTAGACAACCAC-1 ACGTAGACTACAGC-1 ACGTCAGAAACGAA-1 ACGTCAGAGAGCTT-1 
#>             "01"             "01"             "04"             "01"            "021" 
#> ACGTCAGAGGGATG-1 ACGTCCTGATAAGG-1 ACGTCCTGTGAACC-1 ACGTCGCTCCTGAA-1 ACGTCGCTCTATTC-1 
#>             "01"            "021"           "0222"            "032"            "021" 
#> ACGTCGCTTCTCAT-1 ACGTGATGCCATGA-1 ACGTGATGGGTCTA-1 ACGTGATGTAACCG-1 ACGTGATGTGACAC-1 
#>             "04"           "0222"             "01"           "0221"            "032" 
#> ACGTGCCTCCGTAA-1 ACGTGCCTTCTATC-1 ACGTTACTTTCCAT-1 ACGTTGGAAAAGCA-1 ACGTTGGAAACCTG-1 
#>             "01"            "031"             "01"             "01"            "031" 
#> ACGTTGGACCGTAA-1 ACGTTGGAGCCAAT-1 ACGTTGGATATGGC-1 ACGTTGGATCAGGT-1 ACGTTTACATCAGC-1 
#>            "021"            "032"             "04"           "0222"             "01" 
#> ACTAAAACCCACAA-1 ACTAAAACTCGACA-1 ACTACGGAATTTCC-1 ACTACGGACCTATT-1 ACTACGGATCGCTC-1 
#>             "01"            "021"             "01"             "01"             "01" 
#> ACTACTACTAAGGA-1 ACTAGGTGGAACCT-1 ACTAGGTGGAACTC-1 ACTATCACCTTGGA-1 ACTATCACTGCCAA-1 
#>             "01"             "01"             "01"            "031"             "01" 
#> ACTCAGGACTGAAC-1 ACTCAGGATCTATC-1 ACTCAGGATTCGTT-1 ACTCCTCTCAACTG-1 ACTCGCACGAAAGT-1 
#>             "01"             "04"            "021"             "01"            "021" 
#> ACTCGCACTACGAC-1 ACTCTCCTGACACT-1 ACTCTCCTGCATAC-1 ACTCTCCTGTTTGG-1 ACTGAGACAACCAC-1 
#>            "021"             "01"             "04"             "01"            "031" 
#> ACTGAGACCCATAG-1 ACTGAGACGTTGGT-1 ACTGCCACACACGT-1 ACTGCCACTCCGTC-1 ACTGGCCTTCAGTG-1 
#>           "0221"             "04"            "031"            "032"            "032" 
#> ACTGTGGACGTGTA-1 ACTGTGGATCTAGG-1 ACTGTTACCCACAA-1 ACTGTTACTGCAGT-1 ACTTAAGAACCACA-1 
#>            "031"             "04"            "021"             "01"             "01" 
#> ACTTAAGATTACTC-1 ACTTAGCTGCGTAT-1 ACTTAGCTGGGAGT-1 ACTTCAACAAGCAA-1 ACTTCAACGTAGGG-1 
#>            "021"           "0221"             "01"            "031"            "032" 
#> ACTTCCCTTTCCGC-1 ACTTCTGACATGCA-1 ACTTGACTCCACAA-1 ACTTGGGAGAAAGT-1 ACTTGGGAGGTTTG-1 
#>             "01"             "04"             "04"            "021"             "01" 
#> ACTTGGGATGTGAC-1 ACTTGGGATTGACG-1 ACTTGTACCTGTCC-1 ACTTTGTGGAAAGT-1 ACTTTGTGGATAGA-1 
#>            "021"           "0222"             "01"             "01"           "0222" 
#> AGAAACGAAAGTAG-1 AGAAAGTGCGCAAT-1 AGAAAGTGGGGATG-1 AGAACAGAAATGCC-1 AGAACAGACGACTA-1 
#>             "04"             "01"            "021"            "032"             "04" 
#> AGAACAGAGACAAA-1 AGAACGCTTTGCTT-1 AGAAGATGTGACTG-1 AGAATGGAAGAAGT-1 AGAATTTGTAACCG-1 
#>             "01"             "01"             "01"            "031"             "01" 
#> AGAATTTGTAGAGA-1 AGACACACTGTAGC-1 AGACACTGTCAAGC-1 AGACCTGAAGTAGA-1 AGACCTGACCAACA-1 
#>             "01"             "01"            "021"            "021"             "01" 
#> AGACCTGAGGAAGC-1 AGACGTACAGAGGC-1 AGACGTACCCCTAC-1 AGACGTACCTCTTA-1 AGACGTACTCGTGA-1 
#>             "01"             "01"             "04"            "021"           "0221" 
#> AGACTGACCATCAG-1 AGACTGACCCTTTA-1 AGACTTCTCATGCA-1 AGAGATGACAGTCA-1 AGAGATGACTGAAC-1 
#>             "01"             "01"             "04"             "04"             "01" 
#> AGAGATGAGGTTTG-1 AGAGATGATCTCGC-1 AGAGATGATTGTGG-1 AGAGCGGAGGCAAG-1 AGAGTCTGGTCGTA-1 
#>            "021"             "04"             "01"           "0222"           "0221" 
#> AGAGTGCTCAGCTA-1 AGAGTGCTCGAATC-1 AGAGTGCTGTCATG-1 AGAGTGCTGTCCTC-1 AGAGTGCTGTGTTG-1 
#>             "01"             "01"             "01"             "01"             "04" 
#> AGATATACCCGTAA-1 AGATATACGATGAA-1 AGATATACTGTTCT-1 AGATATTGCCTACC-1 AGATATTGGCCAAT-1 
#>            "032"             "01"             "04"             "01"           "0222" 
#> AGATCGTGTCTGGA-1 AGATCGTGTTTGTC-1 AGATCTCTATCACG-1 AGATTAACGTTCTT-1 AGATTCCTATCGTG-1 
#>            "021"             "04"             "04"           "0221"             "01" 
#> AGATTCCTCACTTT-1 AGATTCCTGACGAG-1 AGATTCCTGTTCAG-1 AGCAAAGATATGCG-1 AGCACAACAGTCTG-1 
#>            "021"            "021"            "032"             "01"             "01" 
#> AGCACTGAGGGAGT-1 AGCACTGATATGCG-1 AGCACTGATGCTTT-1 AGCACTGATTGCGA-1 AGCATCGAAGATCC-1 
#>             "01"             "01"           "0222"             "01"             "01" 
#> AGCATCGAAGGGTG-1 AGCATCGAGCTTCC-1 AGCATCGAGTGAGG-1 AGCATCGATAACCG-1 AGCATGACGATGAA-1 
#>             "04"            "021"             "01"           "0222"            "031" 
#> AGCCAATGGGGAGT-1 AGCCAATGTATCTC-1 AGCCACCTGGATCT-1 AGCCGGTGCCAATG-1 AGCCGGTGTGTTTC-1 
#>           "0221"             "01"            "031"             "01"             "01" 
#> AGCCGTCTCAATCG-1 AGCCGTCTGAGAGC-1 AGCCTCACGTTCGA-1 AGCCTCACTGTCAG-1 AGCCTCTGCAGTTG-1 
#>             "01"             "01"             "01"           "0222"             "04" 
#> AGCCTCTGCCAATG-1 AGCGAACTGGATCT-1 AGCGAACTTACTGG-1 AGCGATACGGAGCA-1 AGCGATTGAGATCC-1 
#>            "032"             "01"             "01"             "01"            "032" 
#> AGCGCCGAATCTCT-1 AGCGCCGACAGAGG-1 AGCGCTCTACCTTT-1 AGCGGCACCGGGAA-1 AGCGGCTGATGTGC-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> AGCGGGCTTGCCAA-1 AGCGTAACATGCTG-1 AGCGTAACTGAGAA-1 AGCTCGCTACTGGT-1 AGCTCGCTCTGCTC-1 
#>             "01"             "01"           "0222"             "01"             "01" 
#> AGCTGAACCATACG-1 AGCTGAACCTCTCG-1 AGCTGCCTTGGGAG-1 AGCTGCCTTTCATC-1 AGCTGCCTTTCTGT-1 
#>           "0221"             "01"            "021"             "01"             "01" 
#> AGCTGTGATCCAAG-1 AGCTTTACAAGTAG-1 AGCTTTACACCAAC-1 AGCTTTACTCTCAT-1 AGGAAATGAGGAGC-1 
#>             "01"             "01"             "01"             "04"             "01" 
#> AGGAACCTCTTAGG-1 AGGAACCTTGCCTC-1 AGGAATGATAACGC-1 AGGAATGATTTGTC-1 AGGAGTCTGGTTTG-1 
#>           "0221"            "031"             "01"             "01"             "01" 
#> AGGAGTCTTGTCAG-1 AGGATAGACATTTC-1 AGGATAGAGGATTC-1 AGGATGCTACTAGC-1 AGGATGCTTTAGGC-1 
#>             "01"             "01"            "031"             "04"            "032" 
#> AGGCAACTGAAGGC-1 AGGCAGGAGTACCA-1 AGGCCTCTAGTCGT-1 AGGCCTCTCGGAGA-1 AGGCCTCTCGTAAC-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> AGGGACGACGTTGA-1 AGGGACGAGTCAAC-1 AGGGACGAGTTGTG-1 AGGGACGATAGAGA-1 AGGGACGATGCATG-1 
#>             "01"            "032"             "01"             "01"            "031" 
#> AGGGAGTGAGCCTA-1 AGGGCCACCATACG-1 AGGGCGCTAACCAC-1 AGGGCGCTATGGTC-1 AGGGTGGACAGTCA-1 
#>             "01"             "01"            "021"            "031"             "04" 
#> AGGGTGGACTCAAG-1 AGGGTGGAGTTGCA-1 AGGGTTTGTTCATC-1 AGGTCATGAGTGTC-1 AGGTCATGCTTATC-1 
#>            "021"            "031"            "021"             "04"             "01" 
#> AGGTCTGATTCTCA-1 AGGTGGGAAGAATG-1 AGGTGGGAAGTTCG-1 AGGTGTTGGTTACG-1 AGGTTCGAACCTCC-1 
#>           "0221"             "01"             "01"             "04"            "021" 
#> AGGTTCGAACGTAC-1 AGGTTCGAGGGTGA-1 AGTAAGGAGTTTGG-1 AGTAAGGATTCTTG-1 AGTAATACATCACG-1 
#>            "021"             "01"             "01"             "01"            "031" 
#> AGTAATACCGAACT-1 AGTAATTGTCCCAC-1 AGTACGTGAGGGTG-1 AGTACGTGCTGCAA-1 AGTACGTGCTTGGA-1 
#>             "04"             "01"             "01"             "01"             "01" 
#> AGTACTCTACGTGT-1 AGTACTCTCAACCA-1 AGTACTCTCGGTAT-1 AGTAGGCTTGCCTC-1 AGTATAACTTGTCT-1 
#>             "04"            "031"             "01"           "0221"           "0221" 
#> AGTATCCTAGAACA-1 AGTCACGATGAGCT-1 AGTCAGACGAATAG-1 AGTCAGACGCTTAG-1 AGTCAGACTAGAGA-1 
#>             "01"            "031"             "01"             "01"            "031" 
#> AGTCAGACTGCACA-1 AGTCCAGATATCTC-1 AGTCCAGATTTCAC-1 AGTCGAACCAACCA-1 AGTCGCCTCCGTAA-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> AGTCTACTAGGGTG-1 AGTCTACTTGCATG-1 AGTCTTACACCACA-1 AGTCTTACTTCGCC-1 AGTCTTACTTCGGA-1 
#>            "021"           "0221"             "01"             "01"            "032" 
#> AGTGACTGCAACTG-1 AGTGTTCTAACCTG-1 AGTGTTCTATAAGG-1 AGTGTTCTCACTTT-1 AGTTAAACCACTTT-1 
#>           "0221"             "01"             "01"            "021"             "01" 
#> AGTTATGAACAGTC-1 AGTTATGACTGAGT-1 AGTTATGAGTTCAG-1 AGTTCTACCAGCTA-1 AGTTCTTGAAGCCT-1 
#>            "021"             "01"             "01"            "021"            "031" 
#> AGTTGTCTACTACG-1 AGTTTAGATGGTCA-1 AGTTTCACGGTCTA-1 AGTTTGCTACAGTC-1 AGTTTGCTACTGGT-1 
#>             "01"             "01"            "031"             "01"            "031" 
#> AGTTTGCTCCAAGT-1 ATAAACACAGTGCT-1 ATAAACACCACCAA-1 ATAACAACATGCTG-1 ATAACAACGTCTAG-1 
#>             "01"             "04"             "01"            "021"             "01" 
#> ATAACAACTTTGTC-1 ATAACATGTACTCT-1 ATAACCCTGTTGGT-1 ATAACCCTTGGTAC-1 ATAAGTACGAATGA-1 
#>             "01"             "01"             "01"             "01"             "04" 
#> ATAAGTTGGTACGT-1 ATAAGTTGTCTAGG-1 ATAATCGAGCTGAT-1 ATAATCGATGGTTG-1 ATAATGACCTACTT-1 
#>            "021"             "01"             "04"             "01"             "01" 
#> ATAATGACTCGTGA-1 ATACAATGTTAGGC-1 ATACCACTCGTACA-1 ATACCACTCTAAGC-1 ATACCACTGCCAAT-1 
#>            "021"             "01"            "021"           "0222"            "031" 
#> ATACCGGAATGCTG-1 ATACCGGACATTTC-1 ATACCGGACTTCGC-1 ATACCGGAGGTGTT-1 ATACCGGATCTCGC-1 
#>           "0222"            "021"             "01"            "021"             "01" 
#> ATACCTACGCATCA-1 ATACCTTGGGGCAA-1 ATACGGACAGACTC-1 ATACGGACCTACTT-1 ATACGGACGAGGTG-1 
#>             "01"             "01"            "021"            "021"             "04" 
#> ATACGGACTATGCG-1 ATACGGACTCTGGA-1 ATACGTCTTAACGC-1 ATACTCTGCTTCGC-1 ATACTCTGGTATGC-1 
#>             "04"            "021"            "021"           "0222"            "032" 
#> ATAGATACCATGGT-1 ATAGATACGACGAG-1 ATAGATTGGTGTAC-1 ATAGCCGAACGGAG-1 ATAGCGTGCAGATC-1 
#>             "01"             "01"             "04"             "01"             "01" 
#> ATAGCGTGCCCTTG-1 ATAGCGTGGTATCG-1 ATAGCGTGTCTCTA-1 ATAGCTCTCTGATG-1 ATAGCTCTGAGGTG-1 
#>            "021"            "021"             "01"             "01"             "01" 
#> ATAGGAGAAACAGA-1 ATAGGCTGTCAGAC-1 ATAGTCCTAGTGTC-1 ATAGTCCTTGCATG-1 ATAGTCCTTGTCGA-1 
#>           "0222"             "01"            "021"             "01"             "01" 
#> ATAGTTGACAACTG-1 ATAGTTGACCCTCA-1 ATAGTTGAGACGTT-1 ATAGTTGATAAGCC-1 ATATACGAAGCCAT-1 
#>             "01"           "0221"             "01"             "01"             "01" 
#> ATATACGAATTGGC-1 ATATAGTGGAATGA-1 ATATGCCTAGATCC-1 ATATGCCTGGACAG-1 ATATGCCTTCTCTA-1 
#>             "01"            "021"            "021"             "01"             "01" 
#> ATATGCCTTGGTAC-1 ATCAAATGAGCCTA-1 ATCAAATGGGTAAA-1 ATCAACCTAAACGA-1 ATCAACCTGAGGAC-1 
#>             "01"            "021"           "0221"             "01"             "01" 
#> ATCAACCTTCTCTA-1 ATCAACCTTTGTCT-1 ATCACACTTTGTCT-1 ATCACGGATTTCGT-1 ATCATCTGACACCA-1 
#>            "031"             "01"             "01"             "04"            "032" 
#> ATCATGCTAGAGTA-1 ATCATGCTGAACCT-1 ATCCAGGACGCTAA-1 ATCCAGGATGGAAA-1 ATCCATACTCCTTA-1 
#>            "031"             "04"           "0221"             "01"            "021" 
#> ATCCATACTTCATC-1 ATCCCGTGCAGTCA-1 ATCCCGTGCATGCA-1 ATCCCGTGGCTGAT-1 ATCCGCACGCATCA-1 
#>           "0221"            "032"             "04"             "04"             "04" 
#> ATCCTAACGACGGA-1 ATCCTAACGCTACA-1 ATCGACGAAACTGC-1 ATCGACGAATGACC-1 ATCGAGTGGACGTT-1 
#>             "04"            "031"           "0222"             "01"            "031" 
#> ATCGCAGAATCTCT-1 ATCGCAGAGTGTCA-1 ATCGCCACTGAGGG-1 ATCGCCTGGGTCAT-1 ATCGCCTGTGGCAT-1 
#>           "0221"             "04"            "031"             "01"             "04" 
#> ATCGCGCTCAGAGG-1 ATCGCGCTGGGATG-1 ATCGCGCTTTTCGT-1 ATCGGAACCAGTCA-1 ATCGGTGAGTCAAC-1 
#>            "021"             "01"             "04"             "01"             "01" 
#> ATCGGTGATTGCAG-1 ATCGTTTGCCTACC-1 ATCGTTTGGGTACT-1 ATCGTTTGTGCCAA-1 ATCTACACCCGCTT-1 
#>             "01"           "0222"            "021"            "021"            "021" 
#> ATCTACACCGGGAA-1 ATCTCAACAGGAGC-1 ATCTCAACCTCGAA-1 ATCTCAACCTTGTT-1 ATCTGGGAAACCAC-1 
#>             "01"             "04"             "01"            "021"           "0222" 
#> ATCTGGGAAGTGTC-1 ATCTGGGATTCCGC-1 ATCTGTTGAACGGG-1 ATCTGTTGACCTCC-1 ATCTGTTGCCTTCG-1 
#>           "0222"             "01"             "01"             "01"           "0222" 
#> ATCTGTTGGTTGCA-1 ATCTTGACACCAAC-1 ATCTTGACCTCCCA-1 ATCTTTCTGCATCA-1 ATCTTTCTGTTTCT-1 
#>             "01"             "01"            "021"             "01"             "01" 
#> ATCTTTCTTGTCCC-1 ATGAAACTCTGTGA-1 ATGAAACTGAGGCA-1 ATGAAGGAACAGCT-1 ATGAAGGACCTGTC-1 
#>            "032"             "01"             "01"            "031"             "04" 
#> ATGAAGGACCTTAT-1 ATGAAGGACTAGTG-1 ATGAAGGACTTGCC-1 ATGACGTGACGACT-1 ATGACGTGATCGGT-1 
#>             "04"             "04"            "032"             "04"           "0221" 
#> ATGAGAGAAAGTGA-1 ATGAGAGAACGCAT-1 ATGAGAGAAGTAGA-1 ATGAGCACACAGCT-1 ATGAGCACATCTTC-1 
#>             "01"             "01"             "04"             "01"             "01" 
#> ATGATAACTTCACT-1 ATGATATGAAACAG-1 ATGATATGACTGGT-1 ATGATATGAGCACT-1 ATGATATGGTCATG-1 
#>            "032"             "01"             "01"             "01"             "01" 
#> ATGATATGGTGCTA-1 ATGATATGTTGTCT-1 ATGCACGAATGTCG-1 ATGCACGACTGTAG-1 ATGCACGAGAACCT-1 
#>            "032"           "0222"             "04"             "01"             "04" 
#> ATGCACGAGTTCGA-1 ATGCACGATTGGTG-1 ATGCAGTGTTACCT-1 ATGCAGTGTTCTAC-1 ATGCCAGAACGACT-1 
#>             "01"           "0222"             "04"             "01"             "01" 
#> ATGCCAGACAGTCA-1 ATGCCGCTTGAACC-1 ATGCGATGCTATGG-1 ATGCGATGCTGAGT-1 ATGCGATGGTTACG-1 
#>            "021"           "0222"           "0222"             "01"             "04" 
#> ATGCGCCTTCATTC-1 ATGCTTTGCGAATC-1 ATGCTTTGGGCGAA-1 ATGCTTTGTAGTCG-1 ATGGACACATCGGT-1 
#>             "01"             "01"             "01"             "04"             "01" 
#> ATGGACACGCATCA-1 ATGGGTACAACCTG-1 ATGGGTACATCGGT-1 ATGGGTACTATTCC-1 ATGGGTACTGGGAG-1 
#>            "032"             "04"            "032"             "01"             "01" 
#> ATGTAAACACCTCC-1 ATGTAAACCCGCTT-1 ATGTAAACGGGATG-1 ATGTAAACTCTCCG-1 ATGTAAACTTCACT-1 
#>             "01"             "01"           "0222"             "01"            "021" 
#> ATGTACCTCAGTCA-1 ATGTACCTTAGTCG-1 ATGTACCTTTATCC-1 ATGTACCTTTCACT-1 ATGTCACTAATGCC-1 
#>             "01"             "01"            "021"            "031"            "021" 
#> ATGTCACTCTGCTC-1 ATGTCGGAGGTGAG-1 ATGTTCACAGTCTG-1 ATGTTCACCGTAGT-1 ATGTTGCTTTCAGG-1 
#>             "01"             "01"            "021"             "01"             "01" 
#> ATTAACGATGAGAA-1 ATTAACGATGCAAC-1 ATTAAGACTGCAGT-1 ATTACCTGCCTTAT-1 ATTACCTGGAGGAC-1 
#>            "032"            "031"             "01"            "021"           "0221" 
#> ATTAGATGTTTCAC-1 ATTATGGAATCTCT-1 ATTCAAGAACGGGA-1 ATTCAAGACCTTTA-1 ATTCAGCTCATTGG-1 
#>             "01"             "01"             "01"             "01"            "032" 
#> ATTCCAACCATTGG-1 ATTCCAACTTAGGC-1 ATTCGACTCACTAG-1 ATTCGACTGAATAG-1 ATTCGACTTTTGTC-1 
#>            "021"            "032"            "031"            "021"           "0221" 
#> ATTCGGGAAAGGCG-1 ATTCGGGATTAGGC-1 ATTCTTCTGATACC-1 ATTGAATGGACGGA-1 ATTGATGAAGGTTC-1 
#>            "021"             "01"             "01"             "01"             "01" 
#> ATTGATGACTGAGT-1 ATTGATGAGCGAAG-1 ATTGATGATCTATC-1 ATTGCACTGACGGA-1 ATTGCACTGAGAGC-1 
#>             "01"             "01"             "01"             "01"           "0221" 
#> ATTGCACTGGAGCA-1 ATTGCACTTAGCCA-1 ATTGCACTTGCTTT-1 ATTGCTTGTTACTC-1 ATTGGTCTGACTAC-1 
#>            "021"             "01"           "0221"             "04"             "04" 
#> ATTGGTCTTGTCTT-1 ATTGTAGATTCCCG-1 ATTGTAGATTGCAG-1 ATTGTCTGCGTACA-1 ATTTAGGAACCATG-1 
#>             "04"           "0222"             "01"             "01"           "0221" 
#> ATTTAGGACAGAGG-1 ATTTCCGAGATGAA-1 ATTTCCGAGTGCTA-1 ATTTCGTGTATGGC-1 ATTTCTCTACTTTC-1 
#>             "01"             "01"             "01"            "031"           "0221" 
#> ATTTCTCTAGCAAA-1 ATTTCTCTCACTTT-1 ATTTCTCTTCCCAC-1 ATTTGCACAAGATG-1 CAAAGCACAGCTCA-1 
#>             "01"           "0221"             "01"            "021"             "01" 
#> CAAAGCACCGTAAC-1 CAAAGCACGGTAAA-1 CAAAGCTGAAAGTG-1 CAAAGCTGTTGCTT-1 CAAATATGTGACAC-1 
#>             "04"            "032"             "01"            "021"             "01" 
#> CAAATTGAGGGCAA-1 CAAATTGATGGAGG-1 CAACCAGAAAAGTG-1 CAACCAGAAGTGCT-1 CAACCAGAGTTCAG-1 
#>             "01"            "021"             "01"             "01"           "0222" 
#> CAACCAGATAGAAG-1 CAACCGCTGTTCAG-1 CAACCGCTTTGAGC-1 CAACGATGCGCAAT-1 CAACGTGACTCCAC-1 
#>            "021"             "01"             "01"           "0221"           "0222" 
#> CAACGTGAGCCATA-1 CAACGTGATCAAGC-1 CAAGAAGACCACAA-1 CAAGAAGACGTCTC-1 CAAGAAGATTCTAC-1 
#>            "031"            "021"            "031"           "0222"             "01" 
#> CAAGACTGACCTGA-1 CAAGACTGAGTAGA-1 CAAGCTGACCATAG-1 CAAGCTGATCTATC-1 CAAGGACTGTTCAG-1 
#>             "04"             "04"           "0221"            "031"             "01" 
#> CAAGGACTTCTTTG-1 CAAGGTTGCTCCAC-1 CAAGGTTGTCATTC-1 CAAGGTTGTCTGGA-1 CAAGTCGAAACAGA-1 
#>            "031"             "01"             "04"            "032"             "04" 
#> CAAGTCGATAGCGT-1 CAATAAACGCCATA-1 CAATAATGAACTGC-1 CAATATGACATGGT-1 CAATATGACCTTCG-1 
#>            "021"            "021"            "021"             "01"            "031" 
#> CAATATGACGTTAG-1 CAATATGAGGAGCA-1 CAATCGGAGAAACA-1 CAATCTACTGACTG-1 CAATTCACCCAACA-1 
#>             "01"             "01"             "01"            "032"            "031" 
#> CAATTCACGATAGA-1 CAATTCACTTGTGG-1 CAATTCTGCTTGTT-1 CAATTCTGGCGTAT-1 CACAACGATACGAC-1 
#>             "01"             "01"           "0222"           "0221"             "01" 
#> CACAATCTTGTTCT-1 CACAATCTTTCCAT-1 CACACCTGCTTGAG-1 CACACCTGTATGGC-1 CACAGAACCCTTGC-1 
#>             "01"             "01"             "01"             "01"             "04" 
#> CACAGAACCTGATG-1 CACAGATGGGATTC-1 CACAGATGGTTTCT-1 CACAGCCTGATACC-1 CACAGCCTTGCCAA-1 
#>             "01"             "01"            "021"             "01"           "0221" 
#> CACAGCCTTGTAGC-1 CACAGTGATGAAGA-1 CACATACTACAGCT-1 CACATGGAACACGT-1 CACATGGAAGTCGT-1 
#>             "01"            "021"            "031"             "01"             "01" 
#> CACCACTGCCAACA-1 CACCACTGGCGAAG-1 CACCCATGTTCTGT-1 CACCGGGAATCGAC-1 CACCGGGACGAGAG-1 
#>             "01"            "031"            "031"             "01"            "031" 
#> CACCGGGACGTGTA-1 CACCGGGACTTCTA-1 CACCGGGACTTGCC-1 CACCGGGATTCGGA-1 CACCGTACTAAGGA-1 
#>             "01"            "032"            "031"            "031"             "04" 
#> CACCGTACTAGCGT-1 CACCTGACACCCAA-1 CACCTGACCAGAAA-1 CACCTGACCTCAAG-1 CACCTGACGAAAGT-1 
#>             "01"            "031"             "01"            "031"             "04" 
#> CACCTGACTCGTAG-1 CACGAAACTTCCGC-1 CACGACCTCGATAC-1 CACGCTACAGAAGT-1 CACGCTACTGTTCT-1 
#>             "01"             "04"             "04"             "01"             "04" 
#> CACGGGACAGAGTA-1 CACGGGACATAAGG-1 CACGGGACGTAGGG-1 CACGGGTGCTTCGC-1 CACGGGTGGAGGAC-1 
#>             "01"             "01"             "01"            "031"            "031" 
#> CACGGGTGTGTTTC-1 CACTAACTCCTAAG-1 CACTAACTGAAAGT-1 CACTAGGATGATGC-1 CACTATACCCCGTT-1 
#>             "01"             "04"             "01"             "04"             "04" 
#> CACTATACGTTTGG-1 CACTGAGACAGTCA-1 CACTGCACTTCATC-1 CACTGCTGAGACTC-1 CACTGCTGGAAAGT-1 
#>            "031"            "021"             "01"           "0221"             "01" 
#> CACTTAACCGAATC-1 CACTTAACCGTACA-1 CACTTTGACTCTAT-1 CACTTTGAGCTGTA-1 CAGAAGCTCTCAAG-1 
#>             "01"             "04"            "031"             "01"             "01" 
#> CAGACATGAACGGG-1 CAGACATGTCGACA-1 CAGACCCTAAGGTA-1 CAGACCCTAATGCC-1 CAGACCCTAGGAGC-1 
#>             "01"             "01"           "0221"             "01"             "01" 
#> CAGACTGAGTATGC-1 CAGATCGAATGTCG-1 CAGATCGACCTGAA-1 CAGATCGATATGGC-1 CAGATGACATTCTC-1 
#>             "01"             "04"             "01"             "01"            "032" 
#> CAGCAATGCCTTCG-1 CAGCAATGGAGGGT-1 CAGCAATGGTGCTA-1 CAGCAATGTCTACT-1 CAGCAATGTGACCA-1 
#>             "01"            "032"             "01"            "021"             "01" 
#> CAGCAATGTGAGGG-1 CAGCACCTAAGCCT-1 CAGCACCTAGGCGA-1 CAGCACCTGTAGGG-1 CAGCATGACAACCA-1 
#>            "021"             "01"             "01"           "0222"            "021" 
#> CAGCATGAGACGTT-1 CAGCCTACCCAACA-1 CAGCCTTGCTACCC-1 CAGCCTTGGGGACA-1 CAGCGGACACCCTC-1 
#>             "01"             "01"            "021"             "01"             "01" 
#> CAGCGGACCTTTAC-1 CAGCGTCTAAAGCA-1 CAGCGTCTTATCGG-1 CAGCTAGATGTGAC-1 CAGCTCTGAGGCGA-1 
#>            "032"             "01"             "01"            "021"             "01" 
#> CAGCTCTGCAAGCT-1 CAGCTCTGTCGTAG-1 CAGCTCTGTGTGGT-1 CAGGAACTAACTGC-1 CAGGAACTCTCAGA-1 
#>            "031"           "0222"            "032"             "01"            "021" 
#> CAGGCCGAACACCA-1 CAGGCCGAACACGT-1 CAGGCCGAACGACT-1 CAGGCCGAATCTCT-1 CAGGCCGACTAGCA-1 
#>             "01"             "01"             "01"           "0222"             "04" 
#> CAGGGCACCATACG-1 CAGGGCACCCAACA-1 CAGGGCACTCCCGT-1 CAGGTAACAGACTC-1 CAGGTATGAGTCGT-1 
#>             "04"             "01"             "01"            "021"             "01" 
#> CAGGTATGTGCTTT-1 CAGGTTGAGGATCT-1 CAGTGATGGACGGA-1 CAGTGATGGCTAAC-1 CAGTGATGGGACAG-1 
#>             "01"             "04"             "04"            "032"             "01" 
#> CAGTGATGTAAGGA-1 CAGTGATGTACGCA-1 CAGTGTGATGTCAG-1 CAGTTACTAAGGTA-1 CAGTTACTGATAGA-1 
#>             "04"             "04"             "01"             "04"             "01" 
#> CAGTTGGAAAGAGT-1 CAGTTGGACATACG-1 CAGTTTACACACGT-1 CAGTTTACCCCAAA-1 CATAAAACGGAGCA-1 
#>           "0222"             "01"            "032"             "01"            "021" 
#> CATAAATGAACTGC-1 CATAACCTTCTCCG-1 CATACTACCTCGAA-1 CATACTACCTGAAC-1 CATACTACGTACCA-1 
#>             "01"             "01"             "01"             "01"            "021" 
#> CATACTTGGGTTAC-1 CATAGTCTAATCGC-1 CATAGTCTCACTTT-1 CATATAGACTAAGC-1 CATATAGATCAGGT-1 
#>           "0221"             "01"             "01"            "021"             "04" 
#> CATCAACTAGAAGT-1 CATCAACTCCCTCA-1 CATCAGGACTTCCG-1 CATCAGGATAGCCA-1 CATCAGGATCCTAT-1 
#>             "01"             "01"            "032"            "032"           "0221" 
#> CATCAGGATGCACA-1 CATCAGGATTTCGT-1 CATCATACCGCATA-1 CATCATACGGAGCA-1 CATCATACTCAAGC-1 
#>           "0221"            "021"           "0222"             "04"             "01" 
#> CATCGCTGGGATCT-1 CATCGCTGTGGCAT-1 CATCGGCTATGCTG-1 CATCGGCTTTGGCA-1 CATCTCCTATGTGC-1 
#>             "01"             "04"             "01"             "01"             "04" 
#> CATCTCCTCGAACT-1 CATGAGACACGGGA-1 CATGAGACGTTGAC-1 CATGAGACTCGCCT-1 CATGCCACGGGTGA-1 
#>           "0222"             "04"            "032"             "01"             "01" 
#> CATGCCACTGCCAA-1 CATGCGCTAGTCAC-1 CATGCGCTCAGATC-1 CATGCGCTTTGCAG-1 CATGGCCTAGGGTG-1 
#>             "01"           "0221"            "021"           "0221"            "021" 
#> CATGGCCTGTGCAT-1 CATGTACTATCGTG-1 CATGTTACAGTCGT-1 CATGTTACCTGAGT-1 CATGTTTGGGGATG-1 
#>             "01"            "031"            "031"             "01"            "021" 
#> CATTACACACGGAG-1 CATTACACCAACTG-1 CATTACACGGAGTG-1 CATTACACTACTCT-1 CATTAGCTCCACAA-1 
#>             "04"            "032"             "01"             "01"            "021" 
#> CATTGACTAGCGGA-1 CATTGGGACTCGAA-1 CATTGTACAGCGTT-1 CATTGTACTCGATG-1 CATTGTACTTATCC-1 
#>            "021"             "01"             "01"             "04"             "01" 
#> CATTGTACTTTGCT-1 CATTGTTGCTAGTG-1 CATTTCGACTCTAT-1 CATTTCGAGATACC-1 CATTTGACCACACA-1 
#>           "0221"             "01"            "031"            "032"            "031" 
#> CATTTGACCCTGAA-1 CATTTGTGACGACT-1 CATTTGTGCATTGG-1 CATTTGTGCGGAGA-1 CATTTGTGGGATCT-1 
#>            "031"             "04"             "01"             "01"             "04" 
#> CCAAAGTGCTACGA-1 CCAAAGTGTGAGAA-1 CCAACCTGAAGTAG-1 CCAACCTGACGTAC-1 CCAACCTGTTCGCC-1 
#>           "0222"            "021"            "031"            "021"            "021" 
#> CCAAGAACCCAATG-1 CCAAGAACGTAGCT-1 CCAAGAACGTGTCA-1 CCAAGAACTACTGG-1 CCAAGAACTCCTAT-1 
#>             "01"             "01"             "01"            "031"             "04" 
#> CCAAGATGTCATTC-1 CCAAGATGTTTCAC-1 CCAAGTGAGGAACG-1 CCAAGTGATCAAGC-1 CCAATTTGAACGTC-1 
#>             "01"             "01"             "01"             "01"            "021" 
#> CCACCATGAACGTC-1 CCACCATGATCGGT-1 CCACCATGGACGAG-1 CCACCATGGGGAGT-1 CCACCATGTCCTGC-1 
#>             "01"             "01"           "0221"             "01"            "031" 
#> CCACTGACCCGCTT-1 CCACTGTGGGAAGC-1 CCACTGTGTGTAGC-1 CCACTTCTCGGGAA-1 CCAGAAACCCTGTC-1 
#>            "021"            "021"             "01"           "0222"             "04" 
#> CCAGAAACGAACTC-1 CCAGAAACGGTCTA-1 CCAGACCTCTGAGT-1 CCAGACCTTGTGGT-1 CCAGCACTGCGATT-1 
#>             "01"             "01"             "04"             "01"           "0221" 
#> CCAGCGGAAAGGCG-1 CCAGCGGACGACTA-1 CCAGCGGATGGGAG-1 CCAGCTACACAGTC-1 CCAGCTACCAGCTA-1 
#>            "021"            "021"             "01"             "01"             "04" 
#> CCAGGTCTACACCA-1 CCAGGTCTAGCATC-1 CCAGGTCTATGGTC-1 CCAGTCACACTGGT-1 CCAGTCACACTGTG-1 
#>             "04"            "021"             "01"            "021"             "04" 
#> CCAGTCACGTTGTG-1 CCAGTGCTAACCAC-1 CCAGTGCTCGTAGT-1 CCATCCGAAAGCAA-1 CCATCCGAACGACT-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> CCATCCGAAGGTTC-1 CCATCCGATTCGCC-1 CCATCGTGAACGGG-1 CCATCGTGCTAGAC-1 CCCAACACCTCGCT-1 
#>             "04"            "021"             "01"           "0221"             "04" 
#> CCCAACACGCATCA-1 CCCAACACTTTGTC-1 CCCAACTGCAATCG-1 CCCAGACTGCCTTC-1 CCCAGACTGGTTTG-1 
#>             "01"           "0222"            "021"           "0222"             "04" 
#> CCCAGACTTTCGCC-1 CCCAGTTGCAGTTG-1 CCCAGTTGGGTACT-1 CCCAGTTGTCTATC-1 CCCGATTGTGTTTC-1 
#>           "0221"           "0222"             "01"             "04"             "01" 
#> CCCGGAGAAGGGTG-1 CCCTACGAATTGGC-1 CCCTAGTGCAAAGA-1 CCCTCAGACACTTT-1 CCCTCAGACGAGAG-1 
#>            "021"            "021"             "01"             "04"             "01" 
#> CCCTCAGAGGTCAT-1 CCCTGAACTAAAGG-1 CCCTGATGCAACCA-1 CCCTGATGCAAGCT-1 CCCTTACTAACCAC-1 
#>             "01"             "04"             "01"             "04"           "0222" 
#> CCCTTACTGCAGTT-1 CCGAAAACCTTGTT-1 CCGACACTGGTTTG-1 CCGACTACCCAGTA-1 CCGACTACCGTGTA-1 
#>             "01"           "0221"             "01"           "0222"             "01" 
#> CCGACTACTGAGGG-1 CCGATAGACCTAAG-1 CCGATAGAGTTGGT-1 CCGCGAGACACACA-1 CCGCGAGAGGTTCA-1 
#>             "01"             "01"           "0222"            "021"             "01" 
#> CCGCTATGGGACGA-1 CCGCTATGTGCAAC-1 CCGCTATGTGCACA-1 CCGGTACTGTCCTC-1 CCGTACACAAGCAA-1 
#>             "04"           "0222"            "021"             "01"             "01" 
#> CCGTACACAGCGTT-1 CCGTACACGTCATG-1 CCGTACACGTTGGT-1 CCGTACACTAACGC-1 CCTAAACTTTCGTT-1 
#>             "04"            "031"           "0222"             "01"             "01" 
#> CCTAAGGACCCAAA-1 CCTAAGGACTAGCA-1 CCTAAGGAGGGCAA-1 CCTAAGGATGATGC-1 CCTAAGGATGTCAG-1 
#>             "01"            "021"            "031"             "01"             "01" 
#> CCTACCGACTCTTA-1 CCTACCGAGGGATG-1 CCTAGAGAGGTGAG-1 CCTATAACCAAAGA-1 CCTATAACGAGACG-1 
#>             "01"             "04"             "04"             "01"            "021" 
#> CCTATAACTCAGAC-1 CCTATAACTGCATG-1 CCTCGAACACTTTC-1 CCTCGAACCCGTAA-1 CCTCGAACGTATCG-1 
#>             "01"           "0221"            "032"           "0221"             "01" 
#> CCTCGAACTTACTC-1 CCTCTACTCTTCGC-1 CCTCTACTGGCATT-1 CCTGACTGAAGTAG-1 CCTGACTGGGGAGT-1 
#>             "01"            "021"             "01"             "01"             "01" 
#> CCTGACTGTGTCTT-1 CCTGCAACACGTTG-1 CCTGGACTCGTGAT-1 CCTTAATGCCCAAA-1 CCTTAATGTTCTAC-1 
#>             "04"            "021"             "01"             "04"           "0221" 
#> CCTTCACTACGACT-1 CCTTCACTCAGTCA-1 CCTTCACTGGAGTG-1 CCTTTAGATTCATC-1 CGAACATGCCCTAC-1 
#>             "01"             "04"            "021"            "021"            "021" 
#> CGAACATGTCAGAC-1 CGAAGACTGGAACG-1 CGAAGACTGTTACG-1 CGAAGGGAAACCTG-1 CGAAGGGATCCGAA-1 
#>             "01"             "01"             "01"            "031"             "04" 
#> CGAAGTACCAACTG-1 CGAATCGAGGAGCA-1 CGAATCGAGGAGGT-1 CGACAAACCCATAG-1 CGACAAACCGACAT-1 
#>             "04"            "021"             "01"             "01"             "04" 
#> CGACCACTAAAGTG-1 CGACCACTGCCAAT-1 CGACCGGAAGGTCT-1 CGACCGGATGGAAA-1 CGACCTTGCTAGTG-1 
#>            "032"            "032"             "01"             "01"             "01" 
#> CGACGTCTATCGTG-1 CGACGTCTCGTGTA-1 CGACGTCTGAGGCA-1 CGACTCACGTCGTA-1 CGACTCACGTTGCA-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> CGACTCTGTGTGAC-1 CGACTGCTTCCTCG-1 CGAGAACTAAGGCG-1 CGAGAACTACGTTG-1 CGAGAACTTGTTCT-1 
#>             "01"            "021"            "031"             "01"            "021" 
#> CGAGATTGGACACT-1 CGAGATTGGCCATA-1 CGAGCCGAACACCA-1 CGAGCCGAGGCGAA-1 CGAGCGTGCTCCAC-1 
#>            "031"            "031"             "01"             "01"             "01" 
#> CGAGCGTGGATACC-1 CGAGCGTGTATGCG-1 CGAGGAGACCTCCA-1 CGAGGAGATGTCGA-1 CGAGGCACCTATGG-1 
#>             "01"            "021"             "04"             "01"            "031" 
#> CGAGGCACTATGCG-1 CGAGGCACTCTTCA-1 CGAGGCTGACGCTA-1 CGAGGCTGGCAGTT-1 CGAGGGCTACGACT-1 
#>           "0222"             "01"            "032"            "021"             "04" 
#> CGAGGGCTCGAATC-1 CGAGTATGTCACCC-1 CGATACGAACAGTC-1 CGATACGACAGGAG-1 CGATACGATTCACT-1 
#>             "01"           "0221"           "0222"            "031"             "04" 
#> CGATAGACCCGTAA-1 CGATAGACCGTACA-1 CGATAGACGTAGGG-1 CGATAGACTGTTCT-1 CGATCAGAAGAACA-1 
#>            "021"             "01"            "021"             "01"            "031" 
#> CGATCAGAGAGGGT-1 CGATCAGAGGTACT-1 CGATCAGATGTGAC-1 CGATCCACCGGGAA-1 CGATCCACTTCCAT-1 
#>             "01"             "01"           "0222"            "031"             "04" 
#> CGCAAATGCTCGAA-1 CGCAACCTCCTTGC-1 CGCAACCTGGACGA-1 CGCACGGAGGACGA-1 CGCACGGATCTTTG-1 
#>             "01"             "01"             "01"             "04"             "01" 
#> CGCACTACAGAATG-1 CGCACTACAGCCAT-1 CGCACTACATTGGC-1 CGCACTACTCGCCT-1 CGCACTACTCGTGA-1 
#>             "01"             "01"             "01"             "04"             "01" 
#> CGCACTTGTCACGA-1 CGCAGGACAGATCC-1 CGCAGGACCTACTT-1 CGCAGGACTTGTCT-1 CGCAGGTGCACTGA-1 
#>            "021"             "01"             "01"           "0221"             "01" 
#> CGCAGGTGCCATAG-1 CGCAGGTGGGAACG-1 CGCATAGATCACGA-1 CGCCATACTGCAAC-1 CGCCATTGAGAGGC-1 
#>           "0221"             "01"            "021"             "01"             "01" 
#> CGCCATTGCTATGG-1 CGCCATTGGAGACG-1 CGCCATTGGAGCAG-1 CGCCATTGTACTGG-1 CGCCGAGAGCTTAG-1 
#>             "01"             "01"             "04"             "04"            "032" 
#> CGCCTAACGAATGA-1 CGCCTAACTGCTCC-1 CGCGAGACACAGCT-1 CGCGAGACAGGTCT-1 CGCGAGACGCTACA-1 
#>           "0222"             "01"             "01"             "04"             "01" 
#> CGCGATCTCAGTCA-1 CGCGATCTGTTGAC-1 CGCGATCTTTCTTG-1 CGCGGATGGCCAAT-1 CGCTAAGAATGTCG-1 
#>            "021"            "021"             "04"             "01"             "01" 
#> CGCTAAGACAACTG-1 CGCTAAGACCCTTG-1 CGCTACTGAACAGA-1 CGCTACTGAGAACA-1 CGCTACTGTGAGCT-1 
#>             "01"             "01"           "0222"             "01"             "01" 
#> CGCTACTGTTCCCG-1 CGCTCATGCATTTC-1 CGGAATTGGTTTGG-1 CGGAATTGTGGAGG-1 CGGACCGATGCGTA-1 
#>            "031"            "021"             "01"             "01"            "031" 
#> CGGACCGATGGGAG-1 CGGACTCTAAACAG-1 CGGACTCTCCAATG-1 CGGACTCTCCTCGT-1 CGGAGGCTATTCCT-1 
#>             "01"             "04"             "01"            "032"             "01" 
#> CGGAGGCTTGGATC-1 CGGATAACAACGAA-1 CGGATAACAGCTCA-1 CGGATAACTCAGTG-1 CGGCACGAACTCAG-1 
#>             "01"            "021"             "01"            "021"             "01" 
#> CGGCACGAAGGGTG-1 CGGCACGACTACGA-1 CGGCATCTTAGAAG-1 CGGCATCTTCGTAG-1 CGGCCAGAAAGGTA-1 
#>             "01"           "0221"             "01"            "021"             "01" 
#> CGGCCAGAGAGGCA-1 CGGCGAACCAGTCA-1 CGGCGAACGACAAA-1 CGGCGAACGGTCTA-1 CGGCGAACTACTTC-1 
#>            "031"           "0222"            "032"             "01"            "032" 
#> CGGGACTGCGTGTA-1 CGGGACTGGAATAG-1 CGGGCATGACCCAA-1 CGGGCATGTCTCTA-1 CGGGCATGTTGTGG-1 
#>             "01"            "031"            "031"            "031"             "01" 
#> CGGTAAACTCGCAA-1 CGGTCACTGTTTGG-1 CGGTCACTTACTTC-1 CGTAACGATCGCCT-1 CGTACCACACACAC-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> CGTACCACACGTTG-1 CGTACCACCTCATT-1 CGTACCACGGAGCA-1 CGTACCTGGCATCA-1 CGTAGCCTCTCTCG-1 
#>             "01"             "01"             "01"            "032"            "021" 
#> CGTAGCCTGCGAAG-1 CGTAGCCTGTATGC-1 CGTCAAGAAAGGTA-1 CGTCAAGAACGTGT-1 CGTCAAGACAGAGG-1 
#>             "01"           "0221"            "021"             "01"             "01" 
#> CGTCAAGACAGGAG-1 CGTCCATGCTCTTA-1 CGTCGACTTTCCGC-1 CGTGATGACGCTAA-1 CGTGATGAGGTTCA-1 
#>            "031"             "01"             "01"             "01"             "01" 
#> CGTGCACTTATGGC-1 CGTGTAGAAAAACG-1 CGTGTAGACGATAC-1 CGTGTAGAGTTACG-1 CGTGTAGAGTTCAG-1 
#>           "0222"             "01"            "031"            "032"            "021" 
#> CGTGTAGATTCGGA-1 CGTTAGGAAACCAC-1 CGTTAGGATCATTC-1 CGTTATACCCTGAA-1 CGTTTAACTGGTCA-1 
#>            "032"             "01"           "0222"            "031"             "01" 
#> CTAAACCTCTGACA-1 CTAAACCTGTGCAT-1 CTAACACTAACGTC-1 CTAACACTAGTGCT-1 CTAACGGAACCGAT-1 
#>            "032"             "04"             "01"           "0222"            "032" 
#> CTAACGGATTTCTG-1 CTAACTACGGCAAG-1 CTAAGGACACCATG-1 CTAAGGACCGTTAG-1 CTAAGGACGCCATA-1 
#>             "01"             "01"             "01"             "01"            "021" 
#> CTAAGGTGCCTAAG-1 CTAAGGTGTTGCAG-1 CTAAGGTGTTTCTG-1 CTAATAGAGCTATG-1 CTAATGCTTGTGGT-1 
#>             "04"             "01"             "01"             "01"            "021" 
#> CTACAACTCCCGTT-1 CTACCTCTCAACCA-1 CTACGCACACCTAG-1 CTACGCACTCTCCG-1 CTACGCACTGGTCA-1 
#>            "031"             "01"           "0221"             "01"            "032" 
#> CTACGGCTTTCTTG-1 CTACTATGAACCAC-1 CTACTATGATGTGC-1 CTACTATGCTAAGC-1 CTACTATGTAAAGG-1 
#>           "0222"            "021"            "021"             "01"             "04" 
#> CTACTCCTATGTCG-1 CTACTCCTGCCATA-1 CTAGAGACACTTTC-1 CTAGAGACAGCATC-1 CTAGAGACTTTGGG-1 
#>            "032"            "021"             "01"            "031"           "0221" 
#> CTAGATCTCTCTAT-1 CTAGATCTTCGACA-1 CTAGGATGAGCCTA-1 CTAGGATGATCGTG-1 CTAGGCCTCTCAGA-1 
#>             "01"             "01"             "04"             "04"             "01" 
#> CTAGGTGATGGTTG-1 CTAGTTACCAGAGG-1 CTAGTTACCGCATA-1 CTAGTTACGAAACA-1 CTATAAGATCGTTT-1 
#>           "0221"             "01"             "01"            "032"             "04" 
#> CTATACTGAGGTTC-1 CTATACTGCCAGTA-1 CTATACTGCGCTAA-1 CTATACTGCTACGA-1 CTATACTGTCTCAT-1 
#>            "021"             "01"            "021"            "032"            "032" 
#> CTATACTGTTCGTT-1 CTATAGCTGTCACA-1 CTATAGCTTCGCTC-1 CTATAGCTTGCCTC-1 CTATCAACGAACTC-1 
#>             "01"             "01"            "021"            "021"             "01" 
#> CTATCAACGCAGAG-1 CTATCAACTTTGGG-1 CTATCCCTCCACCT-1 CTATGTACGAGAGC-1 CTATGTACGCTTAG-1 
#>             "01"             "01"            "021"             "01"             "01" 
#> CTATGTACTGTTTC-1 CTATGTTGAAAGCA-1 CTATGTTGTCCTCG-1 CTATGTTGTCTCGC-1 CTATTGACAAACGA-1 
#>             "04"             "01"             "01"             "01"            "021" 
#> CTATTGACACTGGT-1 CTATTGACGGTGAG-1 CTATTGTGGCAAGG-1 CTCAATTGGTTCAG-1 CTCAATTGGTTGCA-1 
#>           "0222"           "0222"             "01"             "01"            "021" 
#> CTCAGAGATAGAAG-1 CTCAGCACTCTAGG-1 CTCAGCACTGAACC-1 CTCAGCACTTGCAG-1 CTCAGCTGAACCTG-1 
#>             "01"             "01"            "021"             "01"            "021" 
#> CTCAGCTGCAGTTG-1 CTCAGGCTCGTTGA-1 CTCAGGCTGCTAAC-1 CTCATTGACCTTAT-1 CTCATTGATGCTTT-1 
#>             "01"           "0221"             "01"             "01"           "0222" 
#> CTCCACGAGAGATA-1 CTCCATCTCTTAGG-1 CTCCATCTGACGAG-1 CTCCGAACAAGTGA-1 CTCCTACTGCCTTC-1 
#>           "0222"             "01"             "01"           "0221"            "021" 
#> CTCGAAGATGTGGT-1 CTCGAAGATTAGGC-1 CTCGACTGCTCTAT-1 CTCGACTGGGTGAG-1 CTCGACTGGTTGAC-1 
#>             "01"            "021"             "01"             "01"            "032" 
#> CTCGAGCTCTGGAT-1 CTCGCATGACTTTC-1 CTCGCATGCTTAGG-1 CTCTAAACCTCGAA-1 CTCTAAACGGCGAA-1 
#>            "032"             "01"             "01"             "01"             "01" 
#> CTCTAATGTCCAAG-1 CTGAACGACAGTCA-1 CTGAACGATGAGGG-1 CTGAAGACCCAACA-1 CTGAAGACGTGCAT-1 
#>            "021"             "01"             "01"             "01"             "04" 
#> CTGAAGTGAAGCCT-1 CTGAAGTGCAGCTA-1 CTGAAGTGGCTATG-1 CTGAAGTGTCCAGA-1 CTGAATCTGAATAG-1 
#>           "0221"             "04"             "01"             "01"             "01" 
#> CTGACAGAATCGTG-1 CTGACCACAGCAAA-1 CTGAGAACCGGGAA-1 CTGAGAACGTAAAG-1 CTGATACTAGTAGA-1 
#>            "031"             "01"             "01"            "032"             "01" 
#> CTGATTTGGTGTTG-1 CTGCAGCTAACCGT-1 CTGCAGCTGACACT-1 CTGCAGCTGGATTC-1 CTGCAGCTTGGCAT-1 
#>           "0222"             "01"             "01"           "0222"             "01" 
#> CTGCCAACAGGAGC-1 CTGCCAACCAGCTA-1 CTGCCAACTAACCG-1 CTGCCAACTGCTCC-1 CTGCCAACTTGCAG-1 
#>             "01"             "01"            "021"            "031"             "01" 
#> CTGCCAACTTGCTT-1 CTGCGACTCCACCT-1 CTGGAAACAAACGA-1 CTGGAAACATCGAC-1 CTGGATGACTGGAT-1 
#>             "01"            "031"            "031"             "01"            "031" 
#> CTGGATGACTTGTT-1 CTGGATGATGTGAC-1 CTGGCACTCAAGCT-1 CTGTAACTAACCAC-1 CTGTAACTAGCGTT-1 
#>             "01"             "04"            "021"             "01"             "01" 
#> CTGTATACGTAAAG-1 CTGTATACGTACGT-1 CTGTATACGTTGGT-1 CTGTGAGACAACCA-1 CTGTGAGACCTTGC-1 
#>             "01"           "0222"             "01"           "0221"            "031" 
#> CTGTGAGACGAACT-1 CTGTGAGACTGTAG-1 CTTAAAGAACCTGA-1 CTTAACACCTGTAG-1 CTTAACACTATCGG-1 
#>            "021"            "021"             "01"             "01"             "04" 
#> CTTAAGCTACCTAG-1 CTTAAGCTAGTACC-1 CTTAAGCTCATCAG-1 CTTAAGCTCCGCTT-1 CTTACAACTAACGC-1 
#>             "01"             "01"             "01"             "04"             "01" 
#> CTTACAACTCCCGT-1 CTTACTGACGTACA-1 CTTAGACTAAACGA-1 CTTAGGGACTTGCC-1 CTTAGGGAGAATCC-1 
#>            "021"             "01"             "01"             "01"             "01" 
#> CTTATCGACTCATT-1 CTTCACCTACCTGA-1 CTTCATGAAGCATC-1 CTTCATGAAGTACC-1 CTTCATGACCGAAT-1 
#>             "01"           "0221"             "04"             "01"             "01" 
#> CTTGAACTACGCAT-1 CTTGATTGAGGTTC-1 CTTGATTGATCTTC-1 CTTGATTGCATTCT-1 CTTGATTGTTTCGT-1 
#>             "01"            "031"            "021"             "01"             "01" 
#> CTTGTATGACACCA-1 CTTGTATGCGCAAT-1 CTTTACGAGCGAAG-1 CTTTAGACCGTGAT-1 CTTTAGACGAGACG-1 
#>             "04"             "04"             "01"             "01"             "01" 
#> CTTTAGACGATACC-1 CTTTAGACGTTGGT-1 CTTTAGACTCATTC-1 CTTTAGTGACGGGA-1 CTTTAGTGGGTGGA-1 
#>             "01"             "01"             "01"            "032"             "01" 
#> CTTTCAGAGAAACA-1 CTTTGATGAGCACT-1 CTTTGATGTCTAGG-1 CTTTGATGTGTCCC-1 CTTTGATGTGTGGT-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> GAAACAGAACTACG-1 GAAACAGAATCACG-1 GAAACAGACATTCT-1 GAAACCTGATCGTG-1 GAAACCTGATGCCA-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> GAAACCTGCTTATC-1 GAAACCTGGACTAC-1 GAAACCTGTGCTAG-1 GAAAGATGATTTCC-1 GAAAGATGCTGATG-1 
#>             "01"           "0221"             "01"             "01"           "0221" 
#> GAAAGATGCTTCGC-1 GAAAGATGTAAGGA-1 GAAAGCCTACGTTG-1 GAAAGTGAAAGTGA-1 GAAAGTGACCACAA-1 
#>            "021"             "01"             "04"           "0222"            "021" 
#> GAAAGTGACTCAAG-1 GAAATACTACCAAC-1 GAAATACTCTTAGG-1 GAAATACTTCCTCG-1 GAACACACGTGCAT-1 
#>             "01"            "021"             "04"            "031"           "0222" 
#> GAACACACTGCCTC-1 GAACAGCTAACTGC-1 GAACAGCTCTCAGA-1 GAACCAACCACAAC-1 GAACCAACTTCCGC-1 
#>             "01"           "0221"           "0221"             "01"            "032" 
#> GAACCTGAACGTGT-1 GAACCTGAGAGACG-1 GAACCTGATGAACC-1 GAACGGGATACTTC-1 GAACTGTGACCTGA-1 
#>             "01"             "01"             "01"             "01"           "0221" 
#> GAACTGTGCCAGTA-1 GAAGAATGCAATCG-1 GAAGCGGACCTATT-1 GAAGCTACGAATGA-1 GAAGCTACGGTTTG-1 
#>            "021"             "01"           "0222"           "0222"            "031" 
#> GAAGGGTGAAAGTG-1 GAAGGGTGCTTAGG-1 GAAGGTCTGAAAGT-1 GAAGGTCTGTTGCA-1 GAAGGTCTTAAAGG-1 
#>             "01"            "021"            "031"             "01"           "0222" 
#> GAAGTAGACTCCCA-1 GAAGTAGATCCAAG-1 GAAGTCACCCTCGT-1 GAAGTCACCCTGTC-1 GAAGTCTGTCGCAA-1 
#>            "031"           "0221"            "021"             "04"             "04" 
#> GAAGTCTGTTCTGT-1 GAAGTGCTAAACGA-1 GAAGTGCTCCGCTT-1 GAAGTGCTTAACCG-1 GAATGCACCCTAAG-1 
#>             "01"            "032"           "0222"             "01"             "01" 
#> GAATGCACCTTCGC-1 GAATGCTGCGGTAT-1 GAATTAACGATAAG-1 GAATTAACGGTCAT-1 GAATTAACGTCGTA-1 
#>            "032"             "01"             "01"             "01"            "032" 
#> GAATTAACTGAAGA-1 GACAACACAGGCGA-1 GACAACACATCGTG-1 GACAACACTCGCCT-1 GACAACTGAGGTTC-1 
#>             "04"             "01"             "01"             "01"             "01" 
#> GACAGGGAAGAGTA-1 GACAGGGAATGCCA-1 GACAGTACGAGCTT-1 GACAGTACTTCGGA-1 GACAGTTGAGTAGA-1 
#>             "04"             "01"           "0221"           "0221"             "04" 
#> GACATTCTCCACCT-1 GACCAAACGACTAC-1 GACCAAACGTATCG-1 GACCCTACTAAAGG-1 GACCTAGACCTCAC-1 
#>           "0222"            "021"            "021"             "04"             "01" 
#> GACCTAGACGAGAG-1 GACCTCACAAGGTA-1 GACCTCACGTACGT-1 GACCTCTGCATCAG-1 GACGAACTCCCACT-1 
#>             "01"             "01"           "0222"             "01"             "01" 
#> GACGATTGCCAATG-1 GACGCCGACCTTCG-1 GACGCTCTCTCTCG-1 GACGGCACACGGGA-1 GACGGCACGAGATA-1 
#>             "04"             "01"            "032"            "032"           "0222" 
#> GACGTAACCTATGG-1 GACGTAACCTGTGA-1 GACGTAACTATGGC-1 GACGTATGTTGACG-1 GACGTATGTTTGCT-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> GACGTCCTACGGAG-1 GACGTCCTCTCAAG-1 GACGTCCTGATAAG-1 GACTACGATGGTCA-1 GACTCCTGCTCGCT-1 
#>             "01"            "021"             "04"             "04"             "01" 
#> GACTCCTGGGTTAC-1 GACTCCTGTTATCC-1 GACTCCTGTTGGTG-1 GACTGAACCAATCG-1 GACTGATGTGATGC-1 
#>             "01"             "01"            "021"            "021"             "01" 
#> GACTTTACATGCCA-1 GACTTTACGACAGG-1 GAGAAATGTTCTCA-1 GAGATAGAAAAAGC-1 GAGATCACGACAAA-1 
#>             "01"             "04"             "04"           "0222"           "0221" 
#> GAGATGCTCTGGAT-1 GAGATGCTGAATGA-1 GAGCAGGATTCCCG-1 GAGCATACTTTGCT-1 GAGCGCACGCGTAT-1 
#>            "031"             "01"            "031"           "0221"            "021" 
#> GAGCGCACGGTGAG-1 GAGCGCTGAAGATG-1 GAGCGCTGTCTTAC-1 GAGCGGCTGGGAGT-1 GAGGACGACTCAGA-1 
#>             "01"            "032"            "021"             "04"             "01" 
#> GAGGATCTGAAAGT-1 GAGGCAGACTTGCC-1 GAGGGAACACCAGT-1 GAGGGAACGAGGGT-1 GAGGGATGGGAAAT-1 
#>             "04"            "031"             "01"             "01"             "01" 
#> GAGGGCCTTCACCC-1 GAGGGTGAAGAGTA-1 GAGGTACTACGGTT-1 GAGGTACTACTCAG-1 GAGGTACTGACACT-1 
#>             "01"             "01"             "01"            "021"            "032" 
#> GAGGTACTGGGAGT-1 GAGGTACTTAGCGT-1 GAGGTGGAGTACGT-1 GAGGTGGATCCTCG-1 GAGGTTACTCGTTT-1 
#>             "01"           "0222"             "01"            "032"           "0222" 
#> GAGGTTTGTAAGCC-1 GAGTCAACCATTCT-1 GAGTCAACGGGAGT-1 GAGTCTGATCGTGA-1 GAGTCTGATTTGGG-1 
#>            "021"             "01"             "01"             "01"             "04" 
#> GAGTGACTCAGCTA-1 GAGTGACTCGGTAT-1 GAGTGACTCTTGCC-1 GAGTGACTGACTAC-1 GAGTGACTGTCTAG-1 
#>            "031"            "031"             "04"             "04"             "01" 
#> GAGTGGGAGTCTTT-1 GAGTGGGATGCCCT-1 GAGTGGGATGCTGA-1 GAGTGTTGCTGTAG-1 GAGTGTTGTGGTCA-1 
#>             "04"             "01"             "04"             "01"             "01" 
#> GAGTTGTGCATGGT-1 GAGTTGTGCTGAGT-1 GAGTTGTGGCGAGA-1 GAGTTGTGGTAGCT-1 GAGTTGTGTATGCG-1 
#>            "021"            "031"            "021"            "032"           "0221" 
#> GATAAGGAGAAACA-1 GATAAGGATTCACT-1 GATACTCTATCGGT-1 GATACTCTTACTTC-1 GATACTCTTGACTG-1 
#>            "021"            "021"             "01"             "01"            "021" 
#> GATAGAGAAGGGTG-1 GATAGAGACTGTGA-1 GATAGAGATCACGA-1 GATAGCACCCATAG-1 GATAGCACGAAGGC-1 
#>            "031"             "01"            "021"             "01"           "0222" 
#> GATAGCACTTGTCT-1 GATATAACAAGGTA-1 GATATAACACGCAT-1 GATATATGCTGGAT-1 GATATATGTCCGTC-1 
#>             "01"             "01"             "01"             "01"            "031" 
#> GATATATGTGGAGG-1 GATATCCTAGAAGT-1 GATATCCTCCCGTT-1 GATATTGACAGGAG-1 GATATTGACGAGTT-1 
#>            "021"             "01"            "021"            "031"           "0221" 
#> GATATTGAGCCAAT-1 GATCCCTGACCTTT-1 GATCCCTGTGTAGC-1 GATCCGCTGGTCAT-1 GATCGAACCGAGAG-1 
#>             "01"            "032"            "031"            "021"             "01" 
#> GATCGATGACTAGC-1 GATCGATGGTAAAG-1 GATCGATGTAAGGA-1 GATCGTGACACTAG-1 GATCGTGATTCACT-1 
#>             "04"             "04"            "021"             "01"             "01" 
#> GATCTACTGGTGAG-1 GATCTACTTTGCAG-1 GATCTTACACCCAA-1 GATCTTACCCTACC-1 GATCTTACGAATAG-1 
#>             "01"             "04"           "0221"             "01"            "021" 
#> GATCTTACGAGATA-1 GATGCAACTCCAGA-1 GATGCCCTACGTAC-1 GATGCCCTCTCATT-1 GATGCCCTGGCAAG-1 
#>            "021"             "01"             "01"             "01"            "021" 
#> GATGCCCTTTTGCT-1 GATTACCTTGTTCT-1 GATTCGGAACGACT-1 GATTCGGACAGGAG-1 GATTCGGAGAAGGC-1 
#>             "01"             "01"             "01"           "0222"           "0221" 
#> GATTCTTGATTCGG-1 GATTCTTGCCGATA-1 GATTCTTGCGAGTT-1 GATTGGACCCGTTC-1 GATTGGACGGTGTT-1 
#>           "0222"             "01"             "04"             "04"             "04" 
#> GATTGGACTTTCGT-1 GATTGGTGTGTCAG-1 GATTTAGACACTCC-1 GATTTAGACTAAGC-1 GATTTAGATTCGTT-1 
#>             "04"             "01"           "0221"             "04"            "021" 
#> GATTTGCTAACGAA-1 GATTTGCTAACGGG-1 GCAACCCTCCTCGT-1 GCAACTGATTGCGA-1 GCAAGACTACTGGT-1 
#>             "01"            "021"            "021"             "01"             "01" 
#> GCAAGACTAGGTCT-1 GCAAGACTCCCTTG-1 GCAATCGACTGCAA-1 GCAATCGAGACGTT-1 GCAATCGATCCTTA-1 
#>             "01"             "01"             "01"           "0222"            "021" 
#> GCAATTCTCGTGTA-1 GCAATTCTTCTCCG-1 GCACAAACAATGCC-1 GCACAAACGGTACT-1 GCACAATGGTGCAT-1 
#>             "01"             "01"             "01"             "01"            "021" 
#> GCACACCTGTGCTA-1 GCACCACTCATGAC-1 GCACCACTGTTTGG-1 GCACCACTTCCTTA-1 GCACCACTTTCGGA-1 
#>            "032"            "021"            "021"            "032"            "021" 
#> GCACCTACGCGATT-1 GCACCTTGGCTGTA-1 GCACCTTGGGGAGT-1 GCACGGACCAGCTA-1 GCACGGTGACCTCC-1 
#>             "01"             "01"           "0222"             "01"             "01" 
#> GCACGGTGCTATGG-1 GCACTAGAACGGGA-1 GCACTAGAAGATGA-1 GCACTAGACCTTTA-1 GCACTAGACGTAAC-1 
#>           "0222"             "01"             "04"           "0221"             "04" 
#> GCACTAGAGTCGTA-1 GCACTAGATGCAAC-1 GCACTGCTGAGGCA-1 GCAGATACAGCGTT-1 GCAGATACGACGGA-1 
#>            "031"             "01"             "01"             "01"             "01" 
#> GCAGATACGCAGAG-1 GCAGCCGACAGTCA-1 GCAGCGTGCACTCC-1 GCAGCTCTCAATCG-1 GCAGCTCTGTTTCT-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> GCAGGGCTAAGAAC-1 GCAGGGCTAAGGGC-1 GCAGGGCTATCGAC-1 GCAGGGCTTGGGAG-1 GCAGTCCTAACTGC-1 
#>             "01"             "01"            "032"            "031"             "01" 
#> GCAGTCCTCTCTTA-1 GCATCAGATGCGTA-1 GCATGTGACAAGCT-1 GCATTGGAGAAGGC-1 GCCAAAACGAGGCA-1 
#>             "01"             "01"             "01"             "01"            "031" 
#> GCCAAATGATCGAC-1 GCCAACCTACGGTT-1 GCCAACCTCGCCTT-1 GCCACGGAGGCGAA-1 GCCACGGATACTGG-1 
#>             "01"             "01"             "01"            "021"             "01" 
#> GCCACTACGTCTTT-1 GCCCAACTACCGAT-1 GCCCAACTATGGTC-1 GCCCATACAGCGTT-1 GCCGACGAACTCTT-1 
#>             "01"             "01"            "031"            "031"           "0222" 
#> GCCGAGTGCGTTGA-1 GCCGGAACGAACTC-1 GCCGGAACGTTCTT-1 GCCGGAACTGCACA-1 GCCGGAACTTACTC-1 
#>             "01"            "031"            "032"            "032"             "01" 
#> GCCGTACTACCTGA-1 GCCGTACTGGCAAG-1 GCCTACACAGTTCG-1 GCCTACACCACTGA-1 GCCTACACCTTGAG-1 
#>             "01"            "021"            "032"           "0221"             "01" 
#> GCCTAGCTACGGAG-1 GCCTAGCTCTATTC-1 GCCTAGCTTCTCAT-1 GCCTAGCTTCTCTA-1 GCCTCAACCATGGT-1 
#>             "04"             "01"             "01"           "0221"             "01" 
#> GCCTCAACTCTTTG-1 GCCTCATGTCTTAC-1 GCCTGACTCTCAAG-1 GCGAAGGAACTCTT-1 GCGAAGGATGCCAA-1 
#>            "031"             "01"            "021"             "01"             "01" 
#> GCGAGAGAGGGACA-1 GCGAGCACTGTCGA-1 GCGAGCACTTGACG-1 GCGAGCACTTGCTT-1 GCGATATGGTACGT-1 
#>             "01"             "04"             "01"            "021"             "01" 
#> GCGATATGGTGTTG-1 GCGCACGAAGTCGT-1 GCGCACGACTTTAC-1 GCGCATCTAGGTCT-1 GCGCATCTGGTTAC-1 
#>             "01"             "01"            "021"             "01"             "01" 
#> GCGCATCTTCGATG-1 GCGCATCTTGCTCC-1 GCGCATCTTTCTAC-1 GCGCGAACGTTCTT-1 GCGCGATGAACGGG-1 
#>             "01"            "032"             "01"             "04"             "01" 
#> GCGCGATGGTGCAT-1 GCGGAGCTCCTGAA-1 GCGGCAACCCGATA-1 GCGGCAACGGAGGT-1 GCGGCAACTGTCGA-1 
#>            "032"             "01"             "01"             "04"            "021" 
#> GCGTAAACACGGTT-1 GCGTAATGCACCAA-1 GCGTATGAACACCA-1 GCGTATGATGAGAA-1 GCTACAGAAAGGTA-1 
#>           "0222"           "0221"             "01"           "0222"             "01" 
#> GCTACAGAATCTTC-1 GCTACCTGAGAAGT-1 GCTACCTGATCACG-1 GCTACGCTAGAATG-1 GCTACGCTAGCTAC-1 
#>             "04"            "021"             "01"             "01"             "01" 
#> GCTACGCTCCCTAC-1 GCTAGAACAGAGGC-1 GCTAGAACGGATCT-1 GCTAGAACTCCCGT-1 GCTAGATGAGCTCA-1 
#>             "01"             "04"             "01"             "01"            "021" 
#> GCTAGATGGCGATT-1 GCTATACTAAGGCG-1 GCTATACTAGCGTT-1 GCTATACTCTCTTA-1 GCTATACTGGACGA-1 
#>            "031"             "01"            "031"             "01"             "01" 
#> GCTCAAGAACCATG-1 GCTCAAGAAGTCAC-1 GCTCAGCTGTCTAG-1 GCTCCATGAGAAGT-1 GCTCCATGCCGAAT-1 
#>           "0222"           "0222"             "01"            "031"             "01" 
#> GCTCGACTCTAGTG-1 GCTGATGAGGTATC-1 GCTTAACTACAGTC-1 GCTTAACTACTGGT-1 GCTTAACTGCTGAT-1 
#>            "021"            "021"            "021"            "031"             "01" 
#> GCTTAACTTAGACC-1 GCTTAACTTCAGTG-1 GGAACACTCACTTT-1 GGAACACTTCAGAC-1 GGAACTACTACTTC-1 
#>            "021"             "01"            "021"            "032"             "01" 
#> GGAACTTGAAGGTA-1 GGAACTTGAGAATG-1 GGAACTTGCTCCAC-1 GGAACTTGGGTAGG-1 GGAAGGACATCGGT-1 
#>           "0222"             "01"            "021"             "04"            "021" 
#> GGAAGGACCACTAG-1 GGAAGGACGAGGGT-1 GGAAGGACGCGAAG-1 GGAAGGTGGCGAGA-1 GGAATCTGAAGGGC-1 
#>             "01"             "01"             "01"            "032"             "01" 
#> GGAATCTGAGGAGC-1 GGAATCTGCTTAGG-1 GGAATCTGCTTGTT-1 GGAATCTGGGAGGT-1 GGAATGCTTTCTAC-1 
#>             "01"             "04"            "021"             "01"             "01" 
#> GGACAGGAAAGGGC-1 GGACAGGAGTGCTA-1 GGACAGGATCTCGC-1 GGACCCGAAGCTAC-1 GGACCGTGCTTACT-1 
#>             "01"             "04"             "01"           "0222"            "021" 
#> GGACCGTGGGAACG-1 GGACCGTGTAACGC-1 GGACCTCTGTAAGA-1 GGACCTCTTTTCTG-1 GGACGAGAGTGTCA-1 
#>           "0222"             "01"            "021"            "031"            "021" 
#> GGACGCTGACGCAT-1 GGACGCTGCTAGCA-1 GGACGCTGTCCTCG-1 GGAGAGACGTGAGG-1 GGAGCAGATTCAGG-1 
#>             "01"             "01"            "032"             "01"             "04" 
#> GGAGCCACCTTCTA-1 GGAGCGCTACGCAT-1 GGAGCGCTCCGAAT-1 GGAGGATGCCACCT-1 GGAGGATGGTTGAC-1 
#>             "04"           "0222"             "01"             "01"            "021" 
#> GGAGGATGTCAGTG-1 GGAGGCCTCGTTGA-1 GGAGGCCTTTCTTG-1 GGAGGTGATACGCA-1 GGAGGTGATCGCTC-1 
#>            "021"            "032"             "01"             "01"             "01" 
#> GGATACTGCAGCTA-1 GGATACTGTCTAGG-1 GGATAGCTCGTCTC-1 GGATAGCTCTGAAC-1 GGATGTACCAAAGA-1 
#>             "01"             "01"             "01"             "01"             "04" 
#> GGATGTACGCGAAG-1 GGATGTACGTCTTT-1 GGATGTACGTGTCA-1 GGATTTCTAGGTTC-1 GGATTTCTTTGTCT-1 
#>             "01"            "021"            "031"             "01"           "0222" 
#> GGCAAGGAAAAAGC-1 GGCAAGGAAGAAGT-1 GGCAAGGACTTGGA-1 GGCAAGGAGGACTT-1 GGCAATACGCTAAC-1 
#>            "032"             "01"            "021"             "01"             "04" 
#> GGCAATACGGCATT-1 GGCAATACGTTTCT-1 GGCACGTGGCTTAG-1 GGCACTCTTTTGTC-1 GGCATATGCTTATC-1 
#>             "01"             "04"           "0221"             "01"            "032" 
#> GGCATATGGGGAGT-1 GGCATATGTGTGAC-1 GGCCACGACAGAGG-1 GGCCAGACTGGTTG-1 GGCCCAGAAAGTAG-1 
#>            "032"             "01"             "01"             "01"            "021" 
#> GGCCGAACAACGAA-1 GGCCGAACGCAGAG-1 GGCCGAACGTAGGG-1 GGCCGAACTCTAGG-1 GGCCGATGCAGGAG-1 
#>             "01"             "01"             "01"            "032"             "01" 
#> GGCCGATGCCGAAT-1 GGCCGATGTACTCT-1 GGCGACACTGCCCT-1 GGCGACTGCGTAAC-1 GGCGCATGCCTAAG-1 
#>             "01"             "01"            "031"             "01"           "0221" 
#> GGCGCATGCTCCAC-1 GGCGCATGTGGAAA-1 GGCGGACTAGAGGC-1 GGCGGACTAGGAGC-1 GGCGGACTCTGACA-1 
#>             "01"             "01"             "01"            "031"             "01" 
#> GGCGGACTCTTGGA-1 GGCGGACTTACTGG-1 GGCGGACTTGAACC-1 GGCTAAACACCTGA-1 GGCTAAACTCTTAC-1 
#>            "031"             "01"             "01"            "031"             "01" 
#> GGCTAATGAGCACT-1 GGCTAATGGTCTAG-1 GGCTCACTACTCAG-1 GGGAACGAAGCTCA-1 GGGAACGACACAAC-1 
#>            "031"             "01"            "021"           "0221"             "04" 
#> GGGAACGAGTGTCA-1 GGGAAGTGTTGAGC-1 GGGACCACACGTTG-1 GGGACCACAGAACA-1 GGGACCACGAATAG-1 
#>            "021"            "021"            "031"             "01"             "01" 
#> GGGACCACGTCATG-1 GGGACCACTCAAGC-1 GGGACCACTCGTGA-1 GGGACCACTGCATG-1 GGGACCTGACCCTC-1 
#>             "01"             "01"             "01"             "01"            "021" 
#> GGGACCTGCTTGCC-1 GGGACCTGTGGAGG-1 GGGATGGACGACAT-1 GGGATGGATACTTC-1 GGGATGGATGGTTG-1 
#>             "01"             "04"             "04"             "01"            "021" 
#> GGGATTACGTCTAG-1 GGGCAAGATGCATG-1 GGGCACACGGTGAG-1 GGGCACACGTTGCA-1 GGGCAGCTTGGGAG-1 
#>             "01"            "021"           "0221"             "01"             "01" 
#> GGGCAGCTTTTCTG-1 GGGCCAACCTTGGA-1 GGGCCAACGCGTTA-1 GGGCCAACTACGCA-1 GGGCCAACTCCAAG-1 
#>             "01"           "0222"             "04"            "021"             "04" 
#> GGGCCATGATGGTC-1 GGGCCATGTTGACG-1 GGGTAACTCAGCTA-1 GGGTAACTCTAGTG-1 GGGTAACTCTGGAT-1 
#>             "01"             "01"             "01"             "04"             "01" 
#> GGGTTAACGTGCAT-1 GGTAAAGAGCTAAC-1 GGTACAACTGCAAC-1 GGTACATGAAAGCA-1 GGTACATGAGCTCA-1 
#>            "032"            "031"             "01"             "04"             "01" 
#> GGTACATGCGGTAT-1 GGTACATGGTTACG-1 GGTACATGTGGGAG-1 GGTACTGAACTCTT-1 GGTAGTACACCACA-1 
#>             "01"             "01"             "01"            "021"             "01" 
#> GGTAGTACACTAGC-1 GGTAGTACCCTGTC-1 GGTAGTACGCCATA-1 GGTAGTACTGTCTT-1 GGTATCGAGACAAA-1 
#>            "021"             "01"            "021"             "01"            "021" 
#> GGTATCGATGAACC-1 GGTCAAACCAAAGA-1 GGTCTAGAGAAACA-1 GGTCTAGATAGCGT-1 GGTGATACCGACTA-1 
#>             "04"             "01"            "021"           "0222"             "04" 
#> GGTGATACGACTAC-1 GGTGATACTGTTTC-1 GGTGGAGAAACGGG-1 GGTGGAGAAGTAGA-1 GGTGGAGACAGATC-1 
#>            "021"             "01"            "031"             "01"            "032" 
#> GGTGGAGATCGATG-1 GGTGGAGATCTCTA-1 GGTGGAGATTACTC-1 GGTTTACTACGCAT-1 GTAACGTGACCTCC-1 
#>             "01"            "021"            "031"            "031"           "0222" 
#> GTAACGTGATCGGT-1 GTAACGTGCAGCTA-1 GTAACGTGGTTGAC-1 GTAAGCACAACGGG-1 GTAAGCACTCATTC-1 
#>             "04"             "04"             "04"             "01"             "04" 
#> GTAAGCTGGTACCA-1 GTAATAACCTTCTA-1 GTAATAACGTTGTG-1 GTACCCTGACAGTC-1 GTACCCTGGAGCTT-1 
#>            "021"            "021"             "01"           "0221"             "01" 
#> GTACCCTGTCCTTA-1 GTACCCTGTGAACC-1 GTACGTGAACGTTG-1 GTACTTTGTCGACA-1 GTAGACTGAGATGA-1 
#>            "031"             "01"            "031"             "01"            "021" 
#> GTAGACTGTATTCC-1 GTAGCAACAGTCGT-1 GTAGCAACCATTTC-1 GTAGCAACGGTAGG-1 GTAGCATGCACTCC-1 
#>             "01"            "021"             "04"            "021"             "04" 
#> GTAGCATGTAAGCC-1 GTAGCCCTGACGTT-1 GTAGCTGAAGCTAC-1 GTAGCTGAATTCGG-1 GTAGGTACACGGGA-1 
#>            "021"             "01"           "0221"             "01"            "021" 
#> GTAGTGACCTCATT-1 GTAGTGTGAGCGGA-1 GTAGTGTGAGGCGA-1 GTAGTGTGTGGTTG-1 GTATCACTGGTAGG-1 
#>             "01"            "032"            "021"             "01"            "021" 
#> GTATCTACAGAAGT-1 GTATCTACGACGAG-1 GTATCTACGTTACG-1 GTATTAGAAACAGA-1 GTATTAGAGGTCTA-1 
#>            "031"            "031"             "01"            "031"             "01" 
#> GTATTCACACAGCT-1 GTATTCACGGGTGA-1 GTCAACGACACTGA-1 GTCAACGAGTGTAC-1 GTCAATCTACACCA-1 
#>             "01"            "031"             "01"            "021"             "01" 
#> GTCAATCTGTAGCT-1 GTCAATCTTGTGGT-1 GTCACCTGCCTCCA-1 GTCACCTGTCCCGT-1 GTCATACTAATCGC-1 
#>            "031"             "01"             "01"             "01"             "04" 
#> GTCATACTGCGATT-1 GTCATACTTCGCCT-1 GTCATACTTTACCT-1 GTCATACTTTGACG-1 GTCCAAGAAAAACG-1 
#>            "032"            "032"            "031"             "01"             "01" 
#> GTCCACTGACCTCC-1 GTCCACTGGGTACT-1 GTCCAGCTACGGGA-1 GTCCCATGTGGTGT-1 GTCGAATGAAGGCG-1 
#>             "01"           "0221"             "01"           "0222"           "0222" 
#> GTCGACCTGAATGA-1 GTCGACCTGTTCAG-1 GTCGCACTTGAGAA-1 GTCTAACTGGTCTA-1 GTCTAGGAGCTTCC-1 
#>            "032"             "01"             "04"           "0221"            "021" 
#> GTGAACACACTCTT-1 GTGAACACTCAGGT-1 GTGACCCTTAAGCC-1 GTGATGACAAGTGA-1 GTGATGACCTGAGT-1 
#>             "01"             "01"             "01"             "01"             "04" 
#> GTGATGACGGTTTG-1 GTGATTCTCATTTC-1 GTGATTCTCTCTCG-1 GTGATTCTGGTTCA-1 GTGATTCTGTCGAT-1 
#>             "01"             "01"            "021"            "032"             "01" 
#> GTGATTCTTAGCGT-1 GTGCCACTCAGGAG-1 GTGGATTGCACTAG-1 GTGGATTGCGGAGA-1 GTGGATTGTAACGC-1 
#>             "04"             "01"           "0221"             "01"             "01" 
#> GTGTACGATCAGTG-1 GTGTAGTGGGTACT-1 GTGTATCTAGCCTA-1 GTGTATCTAGTAGA-1 GTGTATCTGTTACG-1 
#>             "01"             "01"             "04"            "031"             "04" 
#> GTGTCAGAAGCGTT-1 GTTAAAACCGAGAG-1 GTTAAATGCTCGAA-1 GTTAAATGTCGACA-1 GTTAACCTAGCTAC-1 
#>            "031"            "032"             "01"             "04"             "01" 
#> GTTAACCTTGCTTT-1 GTTAGGTGCACTCC-1 GTTAGGTGCCAGTA-1 GTTAGGTGCCCAAA-1 GTTAGGTGGAACTC-1 
#>           "0222"             "01"           "0222"           "0221"             "04" 
#> GTTAGTCTAAGAAC-1 GTTATAGAGGACAG-1 GTTATGCTTTCATC-1 GTTCAACTGGGACA-1 GTTCAACTTATGCG-1 
#>             "01"             "01"             "01"            "032"             "01" 
#> GTTGACGAGCCCTT-1 GTTGACGATATCGG-1 GTTGAGTGGTCTTT-1 GTTGAGTGTGCTTT-1 GTTGATCTGGGACA-1 
#>            "031"            "032"           "0222"             "01"             "01" 
#> GTTGATCTTTTCAC-1 GTTGGATGTTTACC-1 GTTGTACTATTCCT-1 GTTGTACTTTTGGG-1 GTTTAAGACCATGA-1 
#>            "031"           "0221"           "0222"             "01"            "021" 
#> GTTTAAGACTGTCC-1 TAAACAACCAACCA-1 TAAACAACGAATCC-1 TAAAGACTCAGGAG-1 TAAATCGATGAGGG-1 
#>            "031"             "01"             "04"             "01"             "01" 
#> TAACAATGTGCCCT-1 TAACACCTTCGCTC-1 TAACACCTTCGTAG-1 TAACACCTTGTTTC-1 TAACATGACACTAG-1 
#>             "04"            "021"           "0222"            "032"             "04" 
#> TAACCGGACTTACT-1 TAACGTCTCAACCA-1 TAACGTCTCATTGG-1 TAACTAGAATTTCC-1 TAACTAGACTTAGG-1 
#>             "01"            "021"             "01"             "01"             "01" 
#> TAACTAGATCTGGA-1 TAACTCACGAGGAC-1 TAACTCACGTACAC-1 TAACTCACGTATCG-1 TAACTCACTCTACT-1 
#>             "01"            "021"             "04"            "021"            "032" 
#> TAAGAACTGTGTCA-1 TAAGAGGACTAAGC-1 TAAGAGGACTTGTT-1 TAAGATACGGTTCA-1 TAAGATTGCGTAGT-1 
#>            "021"             "04"            "032"            "021"             "01" 
#> TAAGATTGTTGCTT-1 TAAGCGTGAGGTTC-1 TAAGCGTGGACAAA-1 TAAGCGTGGGAAAT-1 TAAGCGTGTGCTCC-1 
#>             "01"            "021"           "0222"             "01"           "0221" 
#> TAAGGCTGCCATGA-1 TAAGGCTGCTGCTC-1 TAAGGCTGTCTCGC-1 TAAGGGCTGCTGTA-1 TAAGGGCTTTACTC-1 
#>             "01"             "01"           "0222"            "031"             "01" 
#> TAAGTAACCGAGAG-1 TAAGTAACCTCCAC-1 TAAGTAACCTGTAG-1 TAAGTAACTTGTCT-1 TAATGATGAGCGGA-1 
#>             "04"             "04"             "01"             "01"             "01" 
#> TAATGCCTCATGAC-1 TAATGCCTCGTCTC-1 TAATGTGAAGATGA-1 TAATGTGACTGCAA-1 TAATGTGATTACTC-1 
#>             "01"            "032"             "01"           "0222"             "01" 
#> TACAAATGGGTACT-1 TACAATGAAAACAG-1 TACAATGACTTAGG-1 TACAATGATGCTAG-1 TACACACTCACACA-1 
#>             "01"            "021"             "01"             "01"             "01" 
#> TACACACTCTTACT-1 TACATAGAACGCAT-1 TACATCACACGGGA-1 TACATCACCTGTTT-1 TACATCACGCTAAC-1 
#>             "01"             "01"             "01"           "0221"             "04" 
#> TACATCACTGAACC-1 TACCATTGAGGTTC-1 TACCATTGCGGGAA-1 TACCATTGGGGATG-1 TACCATTGTGAGGG-1 
#>           "0221"             "01"            "021"            "021"            "021" 
#> TACCGGCTGTTGGT-1 TACGAGTGATCTCT-1 TACGAGTGATGCTG-1 TACGAGTGCGGAGA-1 TACGAGTGGTTGGT-1 
#>             "01"             "01"           "0222"             "01"             "01" 
#> TACGATCTAGTGTC-1 TACGATCTCACTGA-1 TACGATCTTACGAC-1 TACGCAGAGAATCC-1 TACGCCACATTCCT-1 
#>             "01"           "0222"            "031"            "031"             "01" 
#> TACGCCACTCCCAC-1 TACGCCACTCCGAA-1 TACGGAACGCGTTA-1 TACGGCCTGGGACA-1 TACGTACTACGGAG-1 
#>           "0221"             "04"             "04"            "032"             "01" 
#> TACGTACTCAGTTG-1 TACGTACTCCCGTT-1 TACGTTACAGAAGT-1 TACGTTACCAAGCT-1 TACTAAGAAAGGTA-1 
#>             "01"             "04"             "01"            "021"             "04" 
#> TACTAAGAATCACG-1 TACTAAGATGATGC-1 TACTAAGATTGCGA-1 TACTACACGAGAGC-1 TACTACACTTACCT-1 
#>             "01"            "021"             "01"             "01"             "04" 
#> TACTACTGAACCTG-1 TACTACTGATGTCG-1 TACTACTGATTCTC-1 TACTACTGTATGGC-1 TACTCAACGGTCTA-1 
#>            "021"            "032"             "01"             "01"            "021" 
#> TACTCAACTGCTAG-1 TACTCCCTCAGTTG-1 TACTCTGAATCGAC-1 TACTCTGACGAGTT-1 TACTCTGATTGACG-1 
#>             "04"             "01"            "032"             "01"             "04" 
#> TACTGGGATCGATG-1 TACTGTTGAAAGCA-1 TACTGTTGAGGCGA-1 TACTGTTGCTGAAC-1 TACTTGACTCCTCG-1 
#>             "01"             "01"            "032"             "04"            "031" 
#> TACTTGACTGGTGT-1 TACTTTCTTTTGGG-1 TAGAAACTAATCGC-1 TAGAAACTGCTTCC-1 TAGAAACTGGGATG-1 
#>             "04"             "01"             "01"            "021"            "032" 
#> TAGAATTGCGACAT-1 TAGAATTGTATCGG-1 TAGACGTGCTTGAG-1 TAGACGTGTCGCTC-1 TAGAGCACCTTACT-1 
#>             "01"             "01"             "01"             "01"             "04" 
#> TAGATTGACTTGTT-1 TAGATTGAGGCATT-1 TAGCATCTCAGCTA-1 TAGCATCTCCCTCA-1 TAGCATCTGCTGTA-1 
#>             "04"             "01"            "032"             "01"           "0221" 
#> TAGCATCTGGGACA-1 TAGCATCTTGTCGA-1 TAGCCCACAAAAGC-1 TAGCCCACAGCCAT-1 TAGCCCACAGCTAC-1 
#>             "01"             "01"             "01"            "031"            "032" 
#> TAGCCCACCCACAA-1 TAGCCCTGCGGAGA-1 TAGCCGCTTACGAC-1 TAGCCGCTTACTTC-1 TAGCCGCTTTCCAT-1 
#>             "01"             "01"             "01"            "031"           "0222" 
#> TAGCTACTGAATAG-1 TAGCTACTGTAGCT-1 TAGCTACTTTTGCT-1 TAGGACTGTGCTGA-1 TAGGAGCTAAGGCG-1 
#>             "04"             "01"             "01"             "01"             "04" 
#> TAGGAGCTGAGGGT-1 TAGGAGCTTGCATG-1 TAGGCAACCGTCTC-1 TAGGCATGCTCTCG-1 TAGGCATGGCGAGA-1 
#>             "01"             "04"             "04"            "032"            "031" 
#> TAGGCTGATGCCTC-1 TAGGGACTGAACTC-1 TAGGTCGACACTGA-1 TAGGTCGAGGATCT-1 TAGGTGACACACTG-1 
#>            "021"            "032"             "01"             "04"             "01" 
#> TAGGTGACACGTTG-1 TAGGTGTGTTCTGT-1 TAGGTTCTGAAGGC-1 TAGGTTCTTCTTAC-1 TAGGTTCTTGCTGA-1 
#>             "04"            "031"             "01"           "0221"            "021" 
#> TAGTAAACCTCGCT-1 TAGTAAACGTCACA-1 TAGTAATGAGATCC-1 TAGTACCTAAGAAC-1 TAGTATGATCTTAC-1 
#>             "01"             "01"             "01"            "021"             "04" 
#> TAGTATGATTCTCA-1 TAGTCTTGGCTGTA-1 TAGTCTTGGGACTT-1 TAGTCTTGTGGAAA-1 TAGTGGTGAAGTGA-1 
#>             "01"             "01"             "01"            "031"            "032" 
#> TAGTTAGAACCACA-1 TAGTTAGATGAACC-1 TATAAGACAACAGA-1 TATAAGACAGCTCA-1 TATAAGTGACACCA-1 
#>            "032"             "01"             "01"           "0221"           "0221" 
#> TATAAGTGTATCGG-1 TATAAGTGTGGTGT-1 TATACAGAACCCTC-1 TATACAGAAGAACA-1 TATACAGATCCAGA-1 
#>            "021"           "0221"             "01"             "01"             "01" 
#> TATACCACCTGATG-1 TATACGCTACCAAC-1 TATAGATGGACGGA-1 TATAGATGTTCCGC-1 TATCCAACCAGCTA-1 
#>             "04"             "01"             "01"           "0221"            "021" 
#> TATCCAACTCTCTA-1 TATCGACTACTAGC-1 TATCGACTCGATAC-1 TATCGTACAGATGA-1 TATCGTACATTCCT-1 
#>            "031"             "01"           "0221"             "01"            "021" 
#> TATCTCGAGAGATA-1 TATCTGACAGGTTC-1 TATCTGACTGTTTC-1 TATCTTCTAAACAG-1 TATGAATGGAGGAC-1 
#>             "01"            "031"             "01"             "01"            "032" 
#> TATGAATGTTTGCT-1 TATGCGGATAACCG-1 TATGGGTGCATCAG-1 TATGGGTGCTAGCA-1 TATGGTCTCTACCC-1 
#>           "0221"             "01"            "032"             "04"             "01" 
#> TATGTCACGGAACG-1 TATGTCACTAACCG-1 TATGTCACTTCTCA-1 TATGTGCTCCGATA-1 TATGTGCTGGATTC-1 
#>             "04"           "0222"             "04"            "021"             "01" 
#> TATTGCTGAAGAAC-1 TATTGCTGCCGTTC-1 TATTGCTGTCTGGA-1 TATTGCTGTGCACA-1 TATTTCCTATTGGC-1 
#>            "021"             "04"             "01"             "01"            "021" 
#> TATTTCCTGGAGGT-1 TATTTCCTGGTGTT-1 TCAACACTGTTTGG-1 TCAAGGACAGCGTT-1 TCAAGGACATTCTC-1 
#>            "032"             "01"            "032"             "01"            "031" 
#> TCAAGGACGGTGTT-1 TCAATCACACTCTT-1 TCAATCACAGTCGT-1 TCACAACTATGTGC-1 TCACAACTTTGCTT-1 
#>            "021"            "031"           "0221"             "01"            "021" 
#> TCACATACACTTTC-1 TCACATACAGGGTG-1 TCACCCGAGACGGA-1 TCACCGTGCTCGCT-1 TCACCTCTACGACT-1 
#>             "01"             "01"           "0222"           "0221"            "031" 
#> TCACCTCTTCCAAG-1 TCACGAGAGGAGGT-1 TCACTATGGGGCAA-1 TCACTATGGTTGTG-1 TCAGACGACGCTAA-1 
#>           "0221"             "04"            "031"             "04"             "01" 
#> TCAGACGACGTTAG-1 TCAGAGACTCCAGA-1 TCAGCAGACTCCAC-1 TCAGCGCTCTAGTG-1 TCAGCGCTGGATCT-1 
#>            "032"             "01"             "01"             "01"             "04" 
#> TCAGCGCTGGTATC-1 TCAGGATGAAGTAG-1 TCAGGATGCCTTTA-1 TCAGTGGAAGATCC-1 TCAGTTACCTACGA-1 
#>             "01"             "01"           "0221"            "031"            "021" 
#> TCAGTTACTAGAAG-1 TCATCAACCCGATA-1 TCATCAACTGTTCT-1 TCATCATGCAGTTG-1 TCATCCCTTACTGG-1 
#>             "01"             "01"           "0222"             "01"             "01" 
#> TCATTCGATACAGC-1 TCCACGTGGAAACA-1 TCCACTCTACACTG-1 TCCACTCTGAGCTT-1 TCCACTCTTACTTC-1 
#>           "0221"             "01"             "01"            "021"             "04" 
#> TCCATAACAAAGTG-1 TCCATAACCGTAGT-1 TCCATAACGATGAA-1 TCCATAACTACGCA-1 TCCATCCTCCCTAC-1 
#>             "01"             "04"             "01"             "01"            "031" 
#> TCCCACGATCATTC-1 TCCCATCTCAAAGA-1 TCCCGAACACAGTC-1 TCCCGAACTTCGCC-1 TCCCGATGAGATCC-1 
#>             "01"            "021"            "032"           "0221"             "01" 
#> TCCCGATGCCTGAA-1 TCCCTACTCAACTG-1 TCCGAAGACAATCG-1 TCCGAAGACGTTAG-1 TCCGGACTGAGGTG-1 
#>            "021"             "04"            "021"             "01"             "01" 
#> TCCGGACTGTACGT-1 TCCTAAACATCGAC-1 TCCTAAACCGAGAG-1 TCCTAAACCGCATA-1 TCCTAATGGTTTGG-1 
#>             "01"             "01"             "01"            "032"            "031" 
#> TCCTACCTGTCGTA-1 TCCTATGAAAAGCA-1 TCGAATCTCTGGTA-1 TCGACCTGCCGATA-1 TCGACGCTTCTATC-1 
#>             "01"            "031"            "031"           "0221"            "021" 
#> TCGACGCTTTGACG-1 TCGAGAACGACAGG-1 TCGAGAACGTTAGC-1 TCGAGCCTATCAGC-1 TCGAGCCTGCGAGA-1 
#>             "01"             "01"            "031"             "04"             "01" 
#> TCGAGCCTTGTGAC-1 TCGATACTATTCCT-1 TCGATACTTGCACA-1 TCGATTTGATGCCA-1 TCGATTTGCACTCC-1 
#>             "01"             "01"             "01"            "021"             "01" 
#> TCGATTTGCAGCTA-1 TCGATTTGCCTACC-1 TCGATTTGTCGTGA-1 TCGCAGCTAGATCC-1 TCGCCATGAGACTC-1 
#>            "032"            "021"             "04"             "01"             "01" 
#> TCGCCATGTGGTCA-1 TCGGACCTAACAGA-1 TCGGACCTATAAGG-1 TCGGACCTGTACAC-1 TCGGTAGAGTAGGG-1 
#>             "04"             "01"             "04"             "01"             "01" 
#> TCGGTAGATCCCAC-1 TCGTAGGATCGACA-1 TCGTTATGGACAAA-1 TCTAACACCAGTTG-1 TCTAACACGAGCAG-1 
#>             "04"             "01"             "01"            "032"           "0222" 
#> TCTAACTGAACCAC-1 TCTAAGCTAATGCC-1 TCTAAGCTTAGTCG-1 TCTAAGCTTCTAGG-1 TCTAAGCTTGTTCT-1 
#>             "01"             "01"            "031"           "0221"            "021" 
#> TCTAAGCTTTCGCC-1 TCTACAACGACTAC-1 TCTAGACTTAGAAG-1 TCTAGTTGCACCAA-1 TCTATGTGAAGAGT-1 
#>             "04"           "0222"            "021"           "0222"            "021" 
#> TCTATGTGAGTCTG-1 TCTCAAACCTAAGC-1 TCTCTAGAATTTCC-1 TCTGATACACGTGT-1 TCTGATACTCGCCT-1 
#>             "01"             "04"             "01"             "01"             "01" 
#> TCTTACGAACCTGA-1 TCTTCAGAGCTACA-1 TCTTGATGCGGAGA-1 TGAAATTGGTGAGG-1 TGAACCGAAAACGA-1 
#>            "021"           "0222"             "01"            "021"             "01" 
#> TGAACCGACTACTT-1 TGAACCGATTCGGA-1 TGAAGCACTCACGA-1 TGAAGCTGAACGAA-1 TGAAGCTGCATGGT-1 
#>           "0221"           "0221"             "01"             "01"             "04" 
#> TGAAGCTGCGTAAC-1 TGAATAACCACTTT-1 TGAATAACTCCCAC-1 TGACACGACCTTAT-1 TGACCAGACAACCA-1 
#>             "01"             "01"            "032"             "04"             "01" 
#> TGACCAGAGGATTC-1 TGACCGCTAAAAGC-1 TGACCGCTCTGCAA-1 TGACGATGCAAAGA-1 TGACGCCTGTACCA-1 
#>             "01"             "01"             "01"            "021"             "01" 
#> TGACGCCTTTACTC-1 TGACTGGAAGAGAT-1 TGACTGGACCGTAA-1 TGACTGGACGCAAT-1 TGACTGGAGGACAG-1 
#>            "031"            "021"             "01"             "01"             "04" 
#> TGACTGGATTCTCA-1 TGACTTACACACCA-1 TGACTTACAGTCTG-1 TGACTTTGCGCATA-1 TGACTTTGTTTGTC-1 
#>             "01"             "01"           "0222"             "01"             "01" 
#> TGAGACACAAGGTA-1 TGAGACACTCAAGC-1 TGAGCTGAATGCTG-1 TGAGCTGACTGGAT-1 TGAGCTGATGCTAG-1 
#>             "01"             "01"           "0221"            "021"            "021" 
#> TGAGGACTCTCATT-1 TGAGGACTTCATTC-1 TGAGGTACGAACCT-1 TGAGTCGAGTTACG-1 TGAGTGACTGAGCT-1 
#>            "021"             "01"           "0221"             "04"             "01" 
#> TGATAAACGAATCC-1 TGATAAACTCCGTC-1 TGATAAACTTTCAC-1 TGATACCTCACTAG-1 TGATACCTGTTGGT-1 
#>             "01"            "032"             "01"            "021"             "01" 
#> TGATACCTTATGCG-1 TGATACCTTGAAGA-1 TGATATGAACCTTT-1 TGATCACTAGCATC-1 TGATCACTCTCGCT-1 
#>             "01"             "01"             "01"            "031"             "01" 
#> TGATCACTTCTACT-1 TGATCGGACTGACA-1 TGATCGGAGGAGCA-1 TGATCGGATATGCG-1 TGATTAGACATTGG-1 
#>             "04"           "0221"             "04"           "0221"             "01" 
#> TGATTAGATGACTG-1 TGATTAGATGCTAG-1 TGATTCACTATGCG-1 TGATTCACTGTCAG-1 TGATTCTGCCGAAT-1 
#>             "04"             "01"             "01"             "04"             "01" 
#> TGATTCTGCTCTTA-1 TGCAAGTGAGAACA-1 TGCAAGTGGGTAGG-1 TGCAATCTTCAGGT-1 TGCACAGACGACAT-1 
#>             "01"             "01"            "021"           "0222"            "032" 
#> TGCCAAGAGCAGTT-1 TGCCAAGATCTCTA-1 TGCCACTGAACGTC-1 TGCCACTGCGATAC-1 TGCCAGCTTGGCAT-1 
#>            "021"             "01"             "01"            "032"             "01" 
#> TGCCCAACAGCAAA-1 TGCCCAACCGCATA-1 TGCCGACTCTCCCA-1 TGCGAAACAGTCAC-1 TGCGAAACGTTGCA-1 
#>             "01"           "0221"             "04"             "04"             "04" 
#> TGCGATGAACGGTT-1 TGCGATGACCTCGT-1 TGCGATGACTAGTG-1 TGCGATGACTGCTC-1 TGCGATGACTTGCC-1 
#>             "01"             "01"             "04"             "04"             "04" 
#> TGCGATGAGTGCTA-1 TGCGCACTCTTGAG-1 TGCGTAGAATAAGG-1 TGCGTAGACGGGAA-1 TGCGTAGATGGTCA-1 
#>            "021"            "021"            "021"             "04"           "0221" 
#> TGCTAGGAAACCGT-1 TGCTAGGATAGTCG-1 TGCTATACGGTTCA-1 TGCTATACTGCTGA-1 TGCTGAGAGAGCAG-1 
#>            "031"             "01"            "021"            "031"            "032" 
#> TGCTGAGATTATCC-1 TGGAAAGACTCTCG-1 TGGAAAGAGCGATT-1 TGGAAAGAGGTCAT-1 TGGAAAGATATGGC-1 
#>             "01"             "04"             "01"           "0221"             "01" 
#> TGGAACACAAACAG-1 TGGAACACGCTAAC-1 TGGAAGCTCAGATC-1 TGGACCCTACACTG-1 TGGACCCTCATGGT-1 
#>            "032"             "01"             "01"            "021"             "01" 
#> TGGACCCTGGTACT-1 TGGACTGAGTATGC-1 TGGAGACTATCAGC-1 TGGAGACTTCAAGC-1 TGGAGACTTGACCA-1 
#>           "0222"             "01"            "021"             "01"            "031" 
#> TGGAGGGACGGAGA-1 TGGAGGGAGCTATG-1 TGGATCGATAAAGG-1 TGGATGTGACCTAG-1 TGGATGTGTGAAGA-1 
#>            "021"             "01"             "01"             "04"             "04" 
#> TGGATTCTCATACG-1 TGGCAATGCTTGTT-1 TGGCACCTTCACGA-1 TGGCACCTTCAGTG-1 TGGGTATGAAGAGT-1 
#>             "01"             "04"             "01"           "0222"             "01" 
#> TGGGTATGCACAAC-1 TGGGTATGGTACGT-1 TGGGTATGTTTGGG-1 TGGTAGACATGCCA-1 TGGTAGACCCTCAC-1 
#>             "01"             "04"            "021"             "01"            "032" 
#> TGGTAGACCTGATG-1 TGGTAGTGCACTGA-1 TGGTATCTAAACAG-1 TGGTATCTCTTCCG-1 TGGTCAGACCCAAA-1 
#>             "01"            "021"             "01"             "01"             "01" 
#> TGGTTACTGACGTT-1 TGGTTACTGTTCTT-1 TGTAACCTAGAGGC-1 TGTAACCTTGCCTC-1 TGTAATGACACAAC-1 
#>            "021"             "01"             "01"           "0222"            "032" 
#> TGTAATGAGGTAAA-1 TGTACTTGCTCTAT-1 TGTAGGTGCGAGAG-1 TGTAGGTGCTATGG-1 TGTAGGTGCTCTAT-1 
#>            "032"           "0221"             "04"             "01"           "0222" 
#> TGTAGGTGTGCTGA-1 TGTAGTCTTCCAGA-1 TGTAGTCTTGCACA-1 TGTATCTGTTAGGC-1 TGTATGCTCATGGT-1 
#>             "01"             "01"            "031"             "01"             "04" 
#> TGTATGCTGTAGGG-1 TGTATGCTTTCATC-1 TGTCAGGAATACCG-1 TGTCAGGAGATGAA-1 TGTCTAACCCCTTG-1 
#>             "01"             "01"             "01"           "0221"             "01" 
#> TGTGACGATTCTCA-1 TGTGAGACTGTCAG-1 TGTGAGACTTGAGC-1 TGTGAGTGACCACA-1 TGTGAGTGAGTGCT-1 
#>            "031"           "0221"             "01"             "01"           "0221" 
#> TGTGAGTGGAGATA-1 TGTGATCTCTCTAT-1 TGTGATCTGACACT-1 TGTGGATGGCCAAT-1 TGTTAAGACAAAGA-1 
#>            "031"             "04"             "01"             "04"            "021" 
#> TGTTAAGATAAGGA-1 TGTTACACCGCATA-1 TGTTACACGACTAC-1 TGTTACTGGCTACA-1 TGTTACTGTAGTCG-1 
#>            "021"           "0221"            "021"            "031"            "031" 
#> TTAACCACCGTAAC-1 TTAACCACTAAGGA-1 TTAACCACTCAGAC-1 TTACACACGTGTTG-1 TTACACACTCCTAT-1 
#>             "01"            "031"             "01"             "01"             "01" 
#> TTACCATGAATCGC-1 TTACCATGGTTGAC-1 TTACCATGTGTCTT-1 TTACCATGTTGTGG-1 TTACGACTGAGAGC-1 
#>            "021"             "01"            "031"             "04"             "01" 
#> TTACGACTTGACAC-1 TTACGTACGTTCAG-1 TTACTCGAAGAATG-1 TTACTCGACGCAAT-1 TTACTCGAGGGTGA-1 
#>            "021"            "032"            "021"           "0222"             "01" 
#> TTACTCGATCTACT-1 TTAGAATGTGGTGT-1 TTAGAATGTGTAGC-1 TTAGACCTCCTACC-1 TTAGACCTCCTTTA-1 
#>            "032"             "01"             "01"             "01"            "021" 
#> TTAGCTACAACCGT-1 TTAGCTACTGTCCC-1 TTAGCTACTTTCGT-1 TTAGGGACGCGAAG-1 TTAGGGTGCTGGAT-1 
#>             "01"           "0222"             "01"             "01"             "04" 
#> TTAGGGTGTCCTGC-1 TTAGGTCTACTTTC-1 TTAGTCACCAGTTG-1 TTAGTCTGAAAGCA-1 TTAGTCTGCCAACA-1 
#>           "0222"            "021"             "01"             "04"            "032" 
#> TTAGTCTGTGCACA-1 TTATCCGACTAGTG-1 TTATCCGAGAAAGT-1 TTATGAGAGATAAG-1 TTATGCACGTCACA-1 
#>             "01"             "04"           "0222"             "01"             "04" 
#> TTATGGCTTATGGC-1 TTATTCCTATGCTG-1 TTATTCCTGGACAG-1 TTATTCCTGGTACT-1 TTATTCCTTCGTGA-1 
#>           "0222"           "0222"             "04"             "04"             "01" 
#> TTCAAAGATAAAGG-1 TTCAACACAACAGA-1 TTCAACACCCCAAA-1 TTCAACACGGACGA-1 TTCAAGCTAAGAAC-1 
#>             "01"             "01"            "021"           "0221"            "021" 
#> TTCAAGCTAGATGA-1 TTCAAGCTGTTGAC-1 TTCAAGCTTGATGC-1 TTCAAGCTTTCGCC-1 TTCACAACCCGTTC-1 
#>             "01"             "01"             "01"             "01"           "0222" 
#> TTCACAACGTCTGA-1 TTCAGACTACCCAA-1 TTCAGACTCTCGAA-1 TTCAGTACCGACTA-1 TTCAGTACTCAAGC-1 
#>            "021"             "01"             "01"             "01"             "01" 
#> TTCAGTACTCCTAT-1 TTCAGTTGCCAAGT-1 TTCAGTTGTCCTTA-1 TTCAGTTGTCTAGG-1 TTCAGTTGTCTCGC-1 
#>            "021"             "01"            "021"             "01"             "04" 
#> TTCATCGAGGTGGA-1 TTCATGTGTGGTGT-1 TTCATTCTATGTCG-1 TTCATTCTTCTCTA-1 TTCCAAACCTATGG-1 
#>            "021"             "01"            "021"             "01"            "021" 
#> TTCCAAACCTCCCA-1 TTCCAAACTCCCAC-1 TTCCAAACTTGACG-1 TTCCATGACGAGAG-1 TTCCATGACTGTCC-1 
#>             "04"            "032"            "031"            "021"             "01" 
#> TTCCCACTTGAGGG-1 TTCCCACTTGTCTT-1 TTCCTAGAAAGTGA-1 TTCCTAGACTAGTG-1 TTCGAGGACTCTAT-1 
#>            "032"            "021"             "01"           "0221"             "01" 
#> TTCGAGGAGGGCAA-1 TTCGAGGATAGAAG-1 TTCGATTGAGCATC-1 TTCGGAGAATGCCA-1 TTCGGAGATGTGCA-1 
#>             "01"           "0221"             "01"            "021"             "01" 
#> TTCGTATGAAAAGC-1 TTCGTATGGATAGA-1 TTCGTATGGTCTGA-1 TTCGTATGTCCTTA-1 TTCTACGAACGTAC-1 
#>            "031"            "031"             "01"           "0222"             "01" 
#> TTCTACGAGTTGGT-1 TTCTAGTGACACGT-1 TTCTAGTGCATGAC-1 TTCTAGTGGAGAGC-1 TTCTAGTGGTCACA-1 
#>             "01"             "01"            "021"            "032"           "0222" 
#> TTCTCAGAAGAGAT-1 TTCTCAGAAGCATC-1 TTCTCAGATGGAGG-1 TTCTGATGGAGACG-1 TTCTTACTCTGGAT-1 
#>             "01"             "04"             "01"            "032"           "0221" 
#> TTGAACCTCCTTGC-1 TTGAATGAACTACG-1 TTGAATGACTTACT-1 TTGAATGATCTCAT-1 TTGACACTCTGTAG-1 
#>             "04"           "0221"             "01"             "04"             "01" 
#> TTGACACTGATAAG-1 TTGAGGACAGAACA-1 TTGAGGACTACGCA-1 TTGAGGTGGACGGA-1 TTGCATTGAGCTAC-1 
#>             "04"            "021"           "0222"             "01"             "01" 
#> TTGCATTGCTAAGC-1 TTGCATTGTGACTG-1 TTGCTAACACCAAC-1 TTGCTAACACGCTA-1 TTGCTAACCACTCC-1 
#>            "021"             "01"             "01"           "0221"             "01" 
#> TTGCTATGGTACGT-1 TTGCTATGGTAGGG-1 TTGGAGACCAATCG-1 TTGGAGACGCTATG-1 TTGGAGACTATGGC-1 
#>           "0222"           "0221"             "01"            "021"             "04" 
#> TTGGGAACTGAACC-1 TTGGTACTACTGGT-1 TTGGTACTCTTAGG-1 TTGGTACTGAATCC-1 TTGGTACTGGATTC-1 
#>             "01"           "0222"             "01"             "04"             "04" 
#> TTGTACACGTTGTG-1 TTGTACACTTGCAG-1 TTGTAGCTAGCTCA-1 TTGTAGCTCTCTTA-1 TTGTCATGGACGGA-1 
#>             "04"             "01"             "01"             "04"            "032" 
#> TTTAGAGATCCTCG-1 TTTAGCTGATACCG-1 TTTAGCTGGATACC-1 TTTAGCTGTACTCT-1 TTTAGGCTCCTTTA-1 
#>             "04"             "01"            "021"            "021"            "021" 
#> TTTATCCTGTTGTG-1 TTTCACGAGGTTCA-1 TTTCAGTGGAAGGC-1 TTTCAGTGTCACGA-1 TTTCAGTGTCTATC-1 
#>           "0222"             "01"             "01"             "04"            "021" 
#> TTTCAGTGTGCAGT-1 TTTCCAGAGGTGAG-1 TTTCGAACACCTGA-1 TTTCGAACTCTCAT-1 TTTCTACTGAGGCA-1 
#>             "04"             "01"             "04"            "021"             "04" 
#> TTTCTACTTCCTCG-1 TTTGCATGAGAGGC-1 TTTGCATGCCTCAC-1 
#>             "04"             "04"             "01"

show/hide code output

get_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 169))
#> AAACATACAACCAC-1 AAACATTGAGCTAC-1 AAACATTGATCAGC-1 AAACCGTGCTTCCG-1 AAACCGTGTATGCG-1 
#>             "01"             "04"             "01"           "0222"             "03" 
#> AAACGCACTGGTAC-1 AAACGCTGACCAGT-1 AAACGCTGGTTCTT-1 AAACGCTGTAGCCA-1 AAACGCTGTTTCTG-1 
#>             "01"             "01"             "01"             "03"            "021" 
#> AAACTTGAAAAACG-1 AAACTTGATCCAGA-1 AAAGAGACGAGATA-1 AAAGAGACGCGAGA-1 AAAGAGACGGACTT-1 
#>             "04"             "01"             "01"            "021"             "01" 
#> AAAGAGACGGCATT-1 AAAGCAGATATCGG-1 AAAGCCTGTATGCG-1 AAAGGCCTGTCTAG-1 AAAGTTTGATCACG-1 
#>             "01"           "0222"             "01"             "04"             "04" 
#> AAAGTTTGGGGTGA-1 AAAGTTTGTAGAGA-1 AAAGTTTGTAGCGT-1 AAATCAACAATGCC-1 AAATCAACACCAGT-1 
#>             "04"             "01"            "021"             "04"             "01" 
#> AAATCAACCAGGAG-1 AAATCAACCCTATT-1 AAATCAACGGAAGC-1 AAATCAACTCGCAA-1 AAATCATGACCACA-1 
#>             "01"           "0222"             "01"             "01"           "0221" 
#> AAATCCCTCCACAA-1 AAATCCCTGCTATG-1 AAATGTTGAACGAA-1 AAATGTTGCCACAA-1 AAATGTTGTGGCAT-1 
#>             "01"             "04"            "021"             "03"           "0222" 
#> AAATTCGAAGGTTC-1 AAATTCGAATCACG-1 AAATTCGAGCTGAT-1 AAATTCGAGGAGTG-1 AAATTCGATTCTCA-1 
#>             "01"            "021"           "0221"             "01"             "03" 
#> AAATTGACACGACT-1 AAATTGACTCGCTC-1 AACAAACTCATTTC-1 AACAAACTTTCGTT-1 AACAATACGACGAG-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> AACACGTGCAGAGG-1 AACACGTGGAAAGT-1 AACACGTGGAACCT-1 AACACGTGGCTACA-1 AACACGTGTACGAC-1 
#>             "01"             "01"            "021"             "01"           "0221" 
#> AACAGCACAAGAGT-1 AACATTGATGGGAG-1 AACCAGTGATACCG-1 AACCCAGATCGCTC-1 AACCGATGCTCCCA-1 
#>            "021"           "0221"           "0221"             "01"             "01" 
#> AACCGATGGTCATG-1 AACCGATGTTCTAC-1 AACCGCCTAGCGTT-1 AACCGCCTCTACGA-1 AACCTACTGTGAGG-1 
#>             "04"            "021"             "01"           "0222"           "0222" 
#> AACCTACTGTGTTG-1 AACCTTACGAGACG-1 AACCTTACGCGAGA-1 AACCTTACTAACGC-1 AACCTTTGGACGGA-1 
#>             "01"             "01"             "03"           "0221"             "01" 
#> AACCTTTGTACGCA-1 AACGCAACAAGTAG-1 AACGCATGACCCAA-1 AACGCATGCCTTCG-1 AACGCATGTACTTC-1 
#>           "0221"             "01"             "01"             "01"             "01" 
#> AACGCCCTCGGGAA-1 AACGCCCTCGTACA-1 AACGCCCTGGCATT-1 AACGTCGAGTATCG-1 AACGTGTGAAAGCA-1 
#>             "01"             "03"             "03"             "03"             "01" 
#> AACGTGTGGCGGAA-1 AACGTGTGTCCAAG-1 AACGTGTGTGCTTT-1 AACTACCTTAGAGA-1 AACTCACTCAAGCT-1 
#>             "04"             "01"             "01"             "01"            "021" 
#> AACTCACTTGGAGG-1 AACTCGGAAAGTGA-1 AACTCGGAAGGTCT-1 AACTCTTGCAGGAG-1 AACTGTCTCCCTTG-1 
#>            "021"             "03"            "021"             "01"            "021" 
#> AACTTGCTACGCTA-1 AACTTGCTGGGACA-1 AAGAACGAGTGTTG-1 AAGAAGACGTAGGG-1 AAGACAGAAGTCTG-1 
#>             "04"             "01"             "01"             "04"             "04" 
#> AAGACAGAGGATCT-1 AAGACAGATTACCT-1 AAGAGATGGGTAGG-1 AAGATGGAAAACAG-1 AAGATGGAGAACTC-1 
#>             "01"            "021"             "04"             "04"           "0222" 
#> AAGATGGAGATAAG-1 AAGATTACAACCTG-1 AAGATTACAGATCC-1 AAGATTACCCGTTC-1 AAGATTACCGCCTT-1 
#>           "0222"             "01"           "0222"            "021"            "021" 
#> AAGATTACCTCAAG-1 AAGATTACTCCTCG-1 AAGCAAGAGCGAGA-1 AAGCAAGAGCTTAG-1 AAGCAAGAGGTGTT-1 
#>             "03"            "021"             "01"             "03"             "03" 
#> AAGCACTGAGCAAA-1 AAGCACTGCATACG-1 AAGCACTGGTTCTT-1 AAGCCAACGTGTTG-1 AAGCCATGAACTGC-1 
#>             "04"             "01"             "04"             "01"           "0222" 
#> AAGCCATGACACGT-1 AAGCCATGCGTGAT-1 AAGCCATGTCTCGC-1 AAGCCTGACATGCA-1 AAGCCTGACCGAAT-1 
#>            "021"             "01"             "01"             "01"            "021" 
#> AAGCGACTCCTCAC-1 AAGCGACTGTGTCA-1 AAGCGACTTACAGC-1 AAGCGACTTTGACG-1 AAGCGTACGTCTTT-1 
#>           "0222"             "01"             "04"           "0221"             "01" 
#> AAGGCTTGCGAACT-1 AAGGTCACGGTTAC-1 AAGGTCACTGTTTC-1 AAGGTCACTTCCCG-1 AAGGTCTGACAGTC-1 
#>             "03"            "021"             "04"             "01"             "01" 
#> AAGGTCTGCAGATC-1 AAGTAACTCTGAAC-1 AAGTAACTGAGATA-1 AAGTAGGATACAGC-1 AAGTATACCGAACT-1 
#>             "01"            "021"             "04"             "03"             "01" 
#> AAGTCCGACTTGTT-1 AAGTCCGATAGAAG-1 AAGTCTCTAGTCGT-1 AAGTCTCTCGGAGA-1 AAGTGGCTTGGAGG-1 
#>             "01"             "01"             "01"             "03"             "04" 
#> AAGTTCCTCATTCT-1 AAGTTCCTTCTTAC-1 AATAAGCTCGAATC-1 AATAAGCTCGTTGA-1 AATACCCTGGACGA-1 
#>           "0221"             "01"             "01"             "01"             "04" 
#> AATACCCTGGCATT-1 AATACTGAAAGGGC-1 AATACTGAATTGGC-1 AATAGGGAACCCTC-1 AATAGGGAGAATGA-1 
#>             "01"             "03"             "03"             "04"             "03" 
#> AATCAAACTATCGG-1 AATCCGGAATGCTG-1 AATCCTACCGGTAT-1 AATCCTTGACGGGA-1 AATCCTTGGTGAGG-1 
#>             "01"             "04"             "01"            "021"             "03" 
#> AATCGGTGGAACTC-1 AATCGGTGTGCTTT-1 AATCTAGAAAAGTG-1 AATCTAGAATCGGT-1 AATCTCACAGCCTA-1 
#>             "03"             "01"             "01"             "01"           "0222" 
#> AATCTCACTCTAGG-1 AATCTCTGAACAGA-1 AATCTCTGCTTTAC-1 AATGATACACCAAC-1 AATGATACGGTCAT-1 
#>             "01"             "01"             "03"             "03"           "0222" 
#> AATGCGTGACACCA-1 AATGCGTGGACGGA-1 AATGCGTGGCTATG-1 AATGGAGAATCGTG-1 AATGGAGATCCTTA-1 
#>             "04"            "021"             "04"            "021"             "01" 
#> AATGGCTGACACCA-1 AATGGCTGCGTGAT-1 AATGGCTGTAAAGG-1 AATGGCTGTACTCT-1 AATGGCTGTGAAGA-1 
#>             "04"             "01"             "03"             "03"             "01" 
#> AATGTAACGGTGGA-1 AATGTCCTCTTCTA-1 AATGTTGACAGTCA-1 AATGTTGAGTTGAC-1 AATGTTGATCTACT-1 
#>             "01"             "01"             "01"            "021"             "01" 
#> AATTACGAATTCCT-1 AATTACGACTTCTA-1 AATTACGAGTGAGG-1 AATTACGATTGGCA-1 AATTCCTGCTCAGA-1 
#>           "0222"             "01"             "01"             "04"             "04" 
#> AATTGATGTCGCAA-1 AATTGTGACTTGGA-1 ACAAAGGAGGGTGA-1 ACAAATTGATTCTC-1 ACAAATTGCTCAGA-1 
#>           "0221"             "04"             "01"           "0221"            "021" 
#> ACAAATTGTTGCGA-1 ACAACCGAGGGATG-1 ACAACCGAGTTACG-1 ACAAGAGAAGTCGT-1 ACAAGAGACTTATC-1 
#>             "03"             "03"             "01"           "0222"             "01" 
#> ACAAGAGAGTTGAC-1 ACAATCCTAACCGT-1 ACAATCCTTAGCGT-1 ACAATTGACTGACA-1 ACAATTGATGACTG-1 
#>             "04"             "01"             "04"             "03"             "03" 
#> ACACAGACCATACG-1 ACACCAGAGGGCAA-1 ACACCCTGGTGTTG-1 ACACGAACAGTTCG-1 ACACGATGACGCAT-1 
#>             "03"             "01"             "03"             "01"             "03" 
#> ACACGATGATGTGC-1 ACACGATGTCGTAG-1 ACACGATGTGGTCA-1 ACAGACACGGCATT-1 ACAGACACGTTGTG-1 
#>            "021"             "01"             "01"             "03"             "01" 
#> ACAGCAACACCTAG-1 ACAGCAACCTCAAG-1 ACAGGTACCCCACT-1 ACAGGTACGCTGTA-1 ACAGGTACTGGTGT-1 
#>            "021"           "0221"             "01"             "01"             "03" 
#> ACAGTCGACCCAAA-1 ACAGTCGACCGATA-1 ACAGTGACTCACCC-1 ACAGTGACTCTATC-1 ACAGTGTGGTCACA-1 
#>             "01"             "03"             "01"             "01"             "01" 
#> ACAGTGTGTTGCGA-1 ACATCACTCTACTT-1 ACATGGTGAAGCCT-1 ACATGGTGCAACCA-1 ACATGGTGCGAGTT-1 
#>            "021"            "021"             "01"             "04"             "01" 
#> ACATTCTGGCATAC-1 ACATTCTGGGAACG-1 ACCAACGACATGCA-1 ACCACAGAAAGTAG-1 ACCACAGAGTTGGT-1 
#>             "01"            "021"             "01"             "01"             "01" 
#> ACCACCTGTGTGCA-1 ACCACGCTACAGCT-1 ACCACGCTACCCAA-1 ACCACGCTGCGAGA-1 ACCACGCTGCTGTA-1 
#>             "01"             "01"             "03"             "01"             "01" 
#> ACCAGCCTGACAGG-1 ACCAGTGAACGGTT-1 ACCAGTGAATACCG-1 ACCAGTGAGGGATG-1 ACCAGTGATGACTG-1 
#>             "01"             "04"           "0221"             "01"            "021" 
#> ACCATTACCTTCTA-1 ACCATTACGAGATA-1 ACCATTTGTCATTC-1 ACCCAAGAACTGTG-1 ACCCAAGAATTCCT-1 
#>             "01"             "03"             "01"             "03"           "0221" 
#> ACCCAAGAGGACAG-1 ACCCAAGATTCACT-1 ACCCACTGCGCCTT-1 ACCCACTGGACAGG-1 ACCCACTGGTTCAG-1 
#>             "01"             "04"            "021"             "01"             "03" 
#> ACCCACTGTCGTAG-1 ACCCAGCTCAGAAA-1 ACCCAGCTGTTAGC-1 ACCCAGCTTGCTTT-1 ACCCGTTGATGACC-1 
#>           "0222"             "01"            "021"             "01"             "04" 
#> ACCCGTTGCTGCAA-1 ACCCGTTGCTTCTA-1 ACCCTCGACCTATT-1 ACCCTCGACGGTAT-1 ACCCTCGATAAGGA-1 
#>             "01"             "01"             "03"             "04"           "0222" 
#> ACCCTCGATCAAGC-1 ACCGTGCTACCAGT-1 ACCGTGCTGGAACG-1 ACCTATTGCTGAGT-1 ACCTATTGTGCCCT-1 
#>            "021"             "01"             "04"             "04"           "0221" 
#> ACCTCCGAGTCCTC-1 ACCTCCGATATGCG-1 ACCTCCGATGCTGA-1 ACCTCGTGAACCAC-1 ACCTGAGATATCGG-1 
#>             "01"             "01"             "01"             "01"            "021" 
#> ACCTGGCTAAGTAG-1 ACCTTTGACTCCCA-1 ACCTTTGAGGAACG-1 ACCTTTGAGGAAGC-1 ACGAACACCTTGTT-1 
#>             "03"           "0222"           "0222"           "0222"             "03" 
#> ACGAACTGGCTATG-1 ACGAAGCTCTCCAC-1 ACGAAGCTCTGAGT-1 ACGACCCTATCTCT-1 ACGACCCTGATGAA-1 
#>           "0221"             "01"             "04"           "0222"             "01" 
#> ACGACCCTTGACAC-1 ACGACCCTTGACCA-1 ACGAGGGACAGGAG-1 ACGAGGGACGAACT-1 ACGAGGGATGTAGC-1 
#>             "04"             "01"           "0222"             "01"             "01" 
#> ACGAGTACCCTAAG-1 ACGAGTACGAATCC-1 ACGATCGAGGACTT-1 ACGATCGAGTCACA-1 ACGATGACAATGCC-1 
#>             "04"             "04"             "03"            "021"             "01" 
#> ACGATGACTGGTCA-1 ACGATTCTACGGGA-1 ACGCAATGGTTCAG-1 ACGCACCTGTTAGC-1 ACGCCACTGAACTC-1 
#>             "01"             "03"             "03"             "04"            "021" 
#> ACGCCGGAAACCAC-1 ACGCCGGAAAGCCT-1 ACGCCGGAAATGCC-1 ACGCCTTGCTCCCA-1 ACGCGGTGGCGAGA-1 
#>            "021"             "01"             "01"           "0221"             "01" 
#> ACGCGGTGTGTGGT-1 ACGCGGTGTTTGCT-1 ACGCTCACAGTACC-1 ACGCTCACCCTTGC-1 ACGCTGCTGTTCTT-1 
#>             "04"             "03"             "01"             "01"             "03" 
#> ACGGAACTCAGATC-1 ACGGAACTGTCGTA-1 ACGGAGGACTCTTA-1 ACGGATTGGGAGGT-1 ACGGATTGGTTAGC-1 
#>             "03"           "0221"            "021"             "04"             "01" 
#> ACGGCTCTGAGCAG-1 ACGGCTCTTGCACA-1 ACGGTAACCGCTAA-1 ACGGTAACCTTCGC-1 ACGGTAACGGTGGA-1 
#>             "01"             "01"             "03"             "03"             "01" 
#> ACGGTAACTCGCAA-1 ACGGTATGAGTCGT-1 ACGGTATGGGTATC-1 ACGGTATGGTTGTG-1 ACGGTCCTAACGGG-1 
#>             "01"            "021"             "04"             "04"             "01" 
#> ACGGTCCTCGGGAA-1 ACGTAGACAACCAC-1 ACGTAGACTACAGC-1 ACGTCAGAAACGAA-1 ACGTCAGAGAGCTT-1 
#>             "01"             "01"             "04"             "01"            "021" 
#> ACGTCAGAGGGATG-1 ACGTCCTGATAAGG-1 ACGTCCTGTGAACC-1 ACGTCGCTCCTGAA-1 ACGTCGCTCTATTC-1 
#>             "01"            "021"           "0222"             "03"            "021" 
#> ACGTCGCTTCTCAT-1 ACGTGATGCCATGA-1 ACGTGATGGGTCTA-1 ACGTGATGTAACCG-1 ACGTGATGTGACAC-1 
#>             "04"           "0222"             "01"           "0221"             "03" 
#> ACGTGCCTCCGTAA-1 ACGTGCCTTCTATC-1 ACGTTACTTTCCAT-1 ACGTTGGAAAAGCA-1 ACGTTGGAAACCTG-1 
#>             "01"             "03"             "01"             "01"             "03" 
#> ACGTTGGACCGTAA-1 ACGTTGGAGCCAAT-1 ACGTTGGATATGGC-1 ACGTTGGATCAGGT-1 ACGTTTACATCAGC-1 
#>            "021"             "03"             "04"           "0222"             "01" 
#> ACTAAAACCCACAA-1 ACTAAAACTCGACA-1 ACTACGGAATTTCC-1 ACTACGGACCTATT-1 ACTACGGATCGCTC-1 
#>             "01"            "021"             "01"             "01"             "01" 
#> ACTACTACTAAGGA-1 ACTAGGTGGAACCT-1 ACTAGGTGGAACTC-1 ACTATCACCTTGGA-1 ACTATCACTGCCAA-1 
#>             "01"             "01"             "01"             "03"             "01" 
#> ACTCAGGACTGAAC-1 ACTCAGGATCTATC-1 ACTCAGGATTCGTT-1 ACTCCTCTCAACTG-1 ACTCGCACGAAAGT-1 
#>             "01"             "04"            "021"             "01"            "021" 
#> ACTCGCACTACGAC-1 ACTCTCCTGACACT-1 ACTCTCCTGCATAC-1 ACTCTCCTGTTTGG-1 ACTGAGACAACCAC-1 
#>            "021"             "01"             "04"             "01"             "03" 
#> ACTGAGACCCATAG-1 ACTGAGACGTTGGT-1 ACTGCCACACACGT-1 ACTGCCACTCCGTC-1 ACTGGCCTTCAGTG-1 
#>           "0221"             "04"             "03"             "03"             "03" 
#> ACTGTGGACGTGTA-1 ACTGTGGATCTAGG-1 ACTGTTACCCACAA-1 ACTGTTACTGCAGT-1 ACTTAAGAACCACA-1 
#>             "03"             "04"            "021"             "01"             "01" 
#> ACTTAAGATTACTC-1 ACTTAGCTGCGTAT-1 ACTTAGCTGGGAGT-1 ACTTCAACAAGCAA-1 ACTTCAACGTAGGG-1 
#>            "021"           "0221"             "01"             "03"             "03" 
#> ACTTCCCTTTCCGC-1 ACTTCTGACATGCA-1 ACTTGACTCCACAA-1 ACTTGGGAGAAAGT-1 ACTTGGGAGGTTTG-1 
#>             "01"             "04"             "04"            "021"             "01" 
#> ACTTGGGATGTGAC-1 ACTTGGGATTGACG-1 ACTTGTACCTGTCC-1 ACTTTGTGGAAAGT-1 ACTTTGTGGATAGA-1 
#>            "021"           "0222"             "01"             "01"           "0222" 
#> AGAAACGAAAGTAG-1 AGAAAGTGCGCAAT-1 AGAAAGTGGGGATG-1 AGAACAGAAATGCC-1 AGAACAGACGACTA-1 
#>             "04"             "01"            "021"             "03"             "04" 
#> AGAACAGAGACAAA-1 AGAACGCTTTGCTT-1 AGAAGATGTGACTG-1 AGAATGGAAGAAGT-1 AGAATTTGTAACCG-1 
#>             "01"             "01"             "01"             "03"             "01" 
#> AGAATTTGTAGAGA-1 AGACACACTGTAGC-1 AGACACTGTCAAGC-1 AGACCTGAAGTAGA-1 AGACCTGACCAACA-1 
#>             "01"             "01"            "021"            "021"             "01" 
#> AGACCTGAGGAAGC-1 AGACGTACAGAGGC-1 AGACGTACCCCTAC-1 AGACGTACCTCTTA-1 AGACGTACTCGTGA-1 
#>             "01"             "01"             "04"            "021"           "0221" 
#> AGACTGACCATCAG-1 AGACTGACCCTTTA-1 AGACTTCTCATGCA-1 AGAGATGACAGTCA-1 AGAGATGACTGAAC-1 
#>             "01"             "01"             "04"             "04"             "01" 
#> AGAGATGAGGTTTG-1 AGAGATGATCTCGC-1 AGAGATGATTGTGG-1 AGAGCGGAGGCAAG-1 AGAGTCTGGTCGTA-1 
#>            "021"             "04"             "01"           "0222"           "0221" 
#> AGAGTGCTCAGCTA-1 AGAGTGCTCGAATC-1 AGAGTGCTGTCATG-1 AGAGTGCTGTCCTC-1 AGAGTGCTGTGTTG-1 
#>             "01"             "01"             "01"             "01"             "04" 
#> AGATATACCCGTAA-1 AGATATACGATGAA-1 AGATATACTGTTCT-1 AGATATTGCCTACC-1 AGATATTGGCCAAT-1 
#>             "03"             "01"             "04"             "01"           "0222" 
#> AGATCGTGTCTGGA-1 AGATCGTGTTTGTC-1 AGATCTCTATCACG-1 AGATTAACGTTCTT-1 AGATTCCTATCGTG-1 
#>            "021"             "04"             "04"           "0221"             "01" 
#> AGATTCCTCACTTT-1 AGATTCCTGACGAG-1 AGATTCCTGTTCAG-1 AGCAAAGATATGCG-1 AGCACAACAGTCTG-1 
#>            "021"            "021"             "03"             "01"             "01" 
#> AGCACTGAGGGAGT-1 AGCACTGATATGCG-1 AGCACTGATGCTTT-1 AGCACTGATTGCGA-1 AGCATCGAAGATCC-1 
#>             "01"             "01"           "0222"             "01"             "01" 
#> AGCATCGAAGGGTG-1 AGCATCGAGCTTCC-1 AGCATCGAGTGAGG-1 AGCATCGATAACCG-1 AGCATGACGATGAA-1 
#>             "04"            "021"             "01"           "0222"             "03" 
#> AGCCAATGGGGAGT-1 AGCCAATGTATCTC-1 AGCCACCTGGATCT-1 AGCCGGTGCCAATG-1 AGCCGGTGTGTTTC-1 
#>           "0221"             "01"             "03"             "01"             "01" 
#> AGCCGTCTCAATCG-1 AGCCGTCTGAGAGC-1 AGCCTCACGTTCGA-1 AGCCTCACTGTCAG-1 AGCCTCTGCAGTTG-1 
#>             "01"             "01"             "01"           "0222"             "04" 
#> AGCCTCTGCCAATG-1 AGCGAACTGGATCT-1 AGCGAACTTACTGG-1 AGCGATACGGAGCA-1 AGCGATTGAGATCC-1 
#>             "03"             "01"             "01"             "01"             "03" 
#> AGCGCCGAATCTCT-1 AGCGCCGACAGAGG-1 AGCGCTCTACCTTT-1 AGCGGCACCGGGAA-1 AGCGGCTGATGTGC-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> AGCGGGCTTGCCAA-1 AGCGTAACATGCTG-1 AGCGTAACTGAGAA-1 AGCTCGCTACTGGT-1 AGCTCGCTCTGCTC-1 
#>             "01"             "01"           "0222"             "01"             "01" 
#> AGCTGAACCATACG-1 AGCTGAACCTCTCG-1 AGCTGCCTTGGGAG-1 AGCTGCCTTTCATC-1 AGCTGCCTTTCTGT-1 
#>           "0221"             "01"            "021"             "01"             "01" 
#> AGCTGTGATCCAAG-1 AGCTTTACAAGTAG-1 AGCTTTACACCAAC-1 AGCTTTACTCTCAT-1 AGGAAATGAGGAGC-1 
#>             "01"             "01"             "01"             "04"             "01" 
#> AGGAACCTCTTAGG-1 AGGAACCTTGCCTC-1 AGGAATGATAACGC-1 AGGAATGATTTGTC-1 AGGAGTCTGGTTTG-1 
#>           "0221"             "03"             "01"             "01"             "01" 
#> AGGAGTCTTGTCAG-1 AGGATAGACATTTC-1 AGGATAGAGGATTC-1 AGGATGCTACTAGC-1 AGGATGCTTTAGGC-1 
#>             "01"             "01"             "03"             "04"             "03" 
#> AGGCAACTGAAGGC-1 AGGCAGGAGTACCA-1 AGGCCTCTAGTCGT-1 AGGCCTCTCGGAGA-1 AGGCCTCTCGTAAC-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> AGGGACGACGTTGA-1 AGGGACGAGTCAAC-1 AGGGACGAGTTGTG-1 AGGGACGATAGAGA-1 AGGGACGATGCATG-1 
#>             "01"             "03"             "01"             "01"             "03" 
#> AGGGAGTGAGCCTA-1 AGGGCCACCATACG-1 AGGGCGCTAACCAC-1 AGGGCGCTATGGTC-1 AGGGTGGACAGTCA-1 
#>             "01"             "01"            "021"             "03"             "04" 
#> AGGGTGGACTCAAG-1 AGGGTGGAGTTGCA-1 AGGGTTTGTTCATC-1 AGGTCATGAGTGTC-1 AGGTCATGCTTATC-1 
#>            "021"             "03"            "021"             "04"             "01" 
#> AGGTCTGATTCTCA-1 AGGTGGGAAGAATG-1 AGGTGGGAAGTTCG-1 AGGTGTTGGTTACG-1 AGGTTCGAACCTCC-1 
#>           "0221"             "01"             "01"             "04"            "021" 
#> AGGTTCGAACGTAC-1 AGGTTCGAGGGTGA-1 AGTAAGGAGTTTGG-1 AGTAAGGATTCTTG-1 AGTAATACATCACG-1 
#>            "021"             "01"             "01"             "01"             "03" 
#> AGTAATACCGAACT-1 AGTAATTGTCCCAC-1 AGTACGTGAGGGTG-1 AGTACGTGCTGCAA-1 AGTACGTGCTTGGA-1 
#>             "04"             "01"             "01"             "01"             "01" 
#> AGTACTCTACGTGT-1 AGTACTCTCAACCA-1 AGTACTCTCGGTAT-1 AGTAGGCTTGCCTC-1 AGTATAACTTGTCT-1 
#>             "04"             "03"             "01"           "0221"           "0221" 
#> AGTATCCTAGAACA-1 AGTCACGATGAGCT-1 AGTCAGACGAATAG-1 AGTCAGACGCTTAG-1 AGTCAGACTAGAGA-1 
#>             "01"             "03"             "01"             "01"             "03" 
#> AGTCAGACTGCACA-1 AGTCCAGATATCTC-1 AGTCCAGATTTCAC-1 AGTCGAACCAACCA-1 AGTCGCCTCCGTAA-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> AGTCTACTAGGGTG-1 AGTCTACTTGCATG-1 AGTCTTACACCACA-1 AGTCTTACTTCGCC-1 AGTCTTACTTCGGA-1 
#>            "021"           "0221"             "01"             "01"             "03" 
#> AGTGACTGCAACTG-1 AGTGTTCTAACCTG-1 AGTGTTCTATAAGG-1 AGTGTTCTCACTTT-1 AGTTAAACCACTTT-1 
#>           "0221"             "01"             "01"            "021"             "01" 
#> AGTTATGAACAGTC-1 AGTTATGACTGAGT-1 AGTTATGAGTTCAG-1 AGTTCTACCAGCTA-1 AGTTCTTGAAGCCT-1 
#>            "021"             "01"             "01"            "021"             "03" 
#> AGTTGTCTACTACG-1 AGTTTAGATGGTCA-1 AGTTTCACGGTCTA-1 AGTTTGCTACAGTC-1 AGTTTGCTACTGGT-1 
#>             "01"             "01"             "03"             "01"             "03" 
#> AGTTTGCTCCAAGT-1 ATAAACACAGTGCT-1 ATAAACACCACCAA-1 ATAACAACATGCTG-1 ATAACAACGTCTAG-1 
#>             "01"             "04"             "01"            "021"             "01" 
#> ATAACAACTTTGTC-1 ATAACATGTACTCT-1 ATAACCCTGTTGGT-1 ATAACCCTTGGTAC-1 ATAAGTACGAATGA-1 
#>             "01"             "01"             "01"             "01"             "04" 
#> ATAAGTTGGTACGT-1 ATAAGTTGTCTAGG-1 ATAATCGAGCTGAT-1 ATAATCGATGGTTG-1 ATAATGACCTACTT-1 
#>            "021"             "01"             "04"             "01"             "01" 
#> ATAATGACTCGTGA-1 ATACAATGTTAGGC-1 ATACCACTCGTACA-1 ATACCACTCTAAGC-1 ATACCACTGCCAAT-1 
#>            "021"             "01"            "021"           "0222"             "03" 
#> ATACCGGAATGCTG-1 ATACCGGACATTTC-1 ATACCGGACTTCGC-1 ATACCGGAGGTGTT-1 ATACCGGATCTCGC-1 
#>           "0222"            "021"             "01"            "021"             "01" 
#> ATACCTACGCATCA-1 ATACCTTGGGGCAA-1 ATACGGACAGACTC-1 ATACGGACCTACTT-1 ATACGGACGAGGTG-1 
#>             "01"             "01"            "021"            "021"             "04" 
#> ATACGGACTATGCG-1 ATACGGACTCTGGA-1 ATACGTCTTAACGC-1 ATACTCTGCTTCGC-1 ATACTCTGGTATGC-1 
#>             "04"            "021"            "021"           "0222"             "03" 
#> ATAGATACCATGGT-1 ATAGATACGACGAG-1 ATAGATTGGTGTAC-1 ATAGCCGAACGGAG-1 ATAGCGTGCAGATC-1 
#>             "01"             "01"             "04"             "01"             "01" 
#> ATAGCGTGCCCTTG-1 ATAGCGTGGTATCG-1 ATAGCGTGTCTCTA-1 ATAGCTCTCTGATG-1 ATAGCTCTGAGGTG-1 
#>            "021"            "021"             "01"             "01"             "01" 
#> ATAGGAGAAACAGA-1 ATAGGCTGTCAGAC-1 ATAGTCCTAGTGTC-1 ATAGTCCTTGCATG-1 ATAGTCCTTGTCGA-1 
#>           "0222"             "01"            "021"             "01"             "01" 
#> ATAGTTGACAACTG-1 ATAGTTGACCCTCA-1 ATAGTTGAGACGTT-1 ATAGTTGATAAGCC-1 ATATACGAAGCCAT-1 
#>             "01"           "0221"             "01"             "01"             "01" 
#> ATATACGAATTGGC-1 ATATAGTGGAATGA-1 ATATGCCTAGATCC-1 ATATGCCTGGACAG-1 ATATGCCTTCTCTA-1 
#>             "01"            "021"            "021"             "01"             "01" 
#> ATATGCCTTGGTAC-1 ATCAAATGAGCCTA-1 ATCAAATGGGTAAA-1 ATCAACCTAAACGA-1 ATCAACCTGAGGAC-1 
#>             "01"            "021"           "0221"             "01"             "01" 
#> ATCAACCTTCTCTA-1 ATCAACCTTTGTCT-1 ATCACACTTTGTCT-1 ATCACGGATTTCGT-1 ATCATCTGACACCA-1 
#>             "03"             "01"             "01"             "04"             "03" 
#> ATCATGCTAGAGTA-1 ATCATGCTGAACCT-1 ATCCAGGACGCTAA-1 ATCCAGGATGGAAA-1 ATCCATACTCCTTA-1 
#>             "03"             "04"           "0221"             "01"            "021" 
#> ATCCATACTTCATC-1 ATCCCGTGCAGTCA-1 ATCCCGTGCATGCA-1 ATCCCGTGGCTGAT-1 ATCCGCACGCATCA-1 
#>           "0221"             "03"             "04"             "04"             "04" 
#> ATCCTAACGACGGA-1 ATCCTAACGCTACA-1 ATCGACGAAACTGC-1 ATCGACGAATGACC-1 ATCGAGTGGACGTT-1 
#>             "04"             "03"           "0222"             "01"             "03" 
#> ATCGCAGAATCTCT-1 ATCGCAGAGTGTCA-1 ATCGCCACTGAGGG-1 ATCGCCTGGGTCAT-1 ATCGCCTGTGGCAT-1 
#>           "0221"             "04"             "03"             "01"             "04" 
#> ATCGCGCTCAGAGG-1 ATCGCGCTGGGATG-1 ATCGCGCTTTTCGT-1 ATCGGAACCAGTCA-1 ATCGGTGAGTCAAC-1 
#>            "021"             "01"             "04"             "01"             "01" 
#> ATCGGTGATTGCAG-1 ATCGTTTGCCTACC-1 ATCGTTTGGGTACT-1 ATCGTTTGTGCCAA-1 ATCTACACCCGCTT-1 
#>             "01"           "0222"            "021"            "021"            "021" 
#> ATCTACACCGGGAA-1 ATCTCAACAGGAGC-1 ATCTCAACCTCGAA-1 ATCTCAACCTTGTT-1 ATCTGGGAAACCAC-1 
#>             "01"             "04"             "01"            "021"           "0222" 
#> ATCTGGGAAGTGTC-1 ATCTGGGATTCCGC-1 ATCTGTTGAACGGG-1 ATCTGTTGACCTCC-1 ATCTGTTGCCTTCG-1 
#>           "0222"             "01"             "01"             "01"           "0222" 
#> ATCTGTTGGTTGCA-1 ATCTTGACACCAAC-1 ATCTTGACCTCCCA-1 ATCTTTCTGCATCA-1 ATCTTTCTGTTTCT-1 
#>             "01"             "01"            "021"             "01"             "01" 
#> ATCTTTCTTGTCCC-1 ATGAAACTCTGTGA-1 ATGAAACTGAGGCA-1 ATGAAGGAACAGCT-1 ATGAAGGACCTGTC-1 
#>             "03"             "01"             "01"             "03"             "04" 
#> ATGAAGGACCTTAT-1 ATGAAGGACTAGTG-1 ATGAAGGACTTGCC-1 ATGACGTGACGACT-1 ATGACGTGATCGGT-1 
#>             "04"             "04"             "03"             "04"           "0221" 
#> ATGAGAGAAAGTGA-1 ATGAGAGAACGCAT-1 ATGAGAGAAGTAGA-1 ATGAGCACACAGCT-1 ATGAGCACATCTTC-1 
#>             "01"             "01"             "04"             "01"             "01" 
#> ATGATAACTTCACT-1 ATGATATGAAACAG-1 ATGATATGACTGGT-1 ATGATATGAGCACT-1 ATGATATGGTCATG-1 
#>             "03"             "01"             "01"             "01"             "01" 
#> ATGATATGGTGCTA-1 ATGATATGTTGTCT-1 ATGCACGAATGTCG-1 ATGCACGACTGTAG-1 ATGCACGAGAACCT-1 
#>             "03"           "0222"             "04"             "01"             "04" 
#> ATGCACGAGTTCGA-1 ATGCACGATTGGTG-1 ATGCAGTGTTACCT-1 ATGCAGTGTTCTAC-1 ATGCCAGAACGACT-1 
#>             "01"           "0222"             "04"             "01"             "01" 
#> ATGCCAGACAGTCA-1 ATGCCGCTTGAACC-1 ATGCGATGCTATGG-1 ATGCGATGCTGAGT-1 ATGCGATGGTTACG-1 
#>            "021"           "0222"           "0222"             "01"             "04" 
#> ATGCGCCTTCATTC-1 ATGCTTTGCGAATC-1 ATGCTTTGGGCGAA-1 ATGCTTTGTAGTCG-1 ATGGACACATCGGT-1 
#>             "01"             "01"             "01"             "04"             "01" 
#> ATGGACACGCATCA-1 ATGGGTACAACCTG-1 ATGGGTACATCGGT-1 ATGGGTACTATTCC-1 ATGGGTACTGGGAG-1 
#>             "03"             "04"             "03"             "01"             "01" 
#> ATGTAAACACCTCC-1 ATGTAAACCCGCTT-1 ATGTAAACGGGATG-1 ATGTAAACTCTCCG-1 ATGTAAACTTCACT-1 
#>             "01"             "01"           "0222"             "01"            "021" 
#> ATGTACCTCAGTCA-1 ATGTACCTTAGTCG-1 ATGTACCTTTATCC-1 ATGTACCTTTCACT-1 ATGTCACTAATGCC-1 
#>             "01"             "01"            "021"             "03"            "021" 
#> ATGTCACTCTGCTC-1 ATGTCGGAGGTGAG-1 ATGTTCACAGTCTG-1 ATGTTCACCGTAGT-1 ATGTTGCTTTCAGG-1 
#>             "01"             "01"            "021"             "01"             "01" 
#> ATTAACGATGAGAA-1 ATTAACGATGCAAC-1 ATTAAGACTGCAGT-1 ATTACCTGCCTTAT-1 ATTACCTGGAGGAC-1 
#>             "03"             "03"             "01"            "021"           "0221" 
#> ATTAGATGTTTCAC-1 ATTATGGAATCTCT-1 ATTCAAGAACGGGA-1 ATTCAAGACCTTTA-1 ATTCAGCTCATTGG-1 
#>             "01"             "01"             "01"             "01"             "03" 
#> ATTCCAACCATTGG-1 ATTCCAACTTAGGC-1 ATTCGACTCACTAG-1 ATTCGACTGAATAG-1 ATTCGACTTTTGTC-1 
#>            "021"             "03"             "03"            "021"           "0221" 
#> ATTCGGGAAAGGCG-1 ATTCGGGATTAGGC-1 ATTCTTCTGATACC-1 ATTGAATGGACGGA-1 ATTGATGAAGGTTC-1 
#>            "021"             "01"             "01"             "01"             "01" 
#> ATTGATGACTGAGT-1 ATTGATGAGCGAAG-1 ATTGATGATCTATC-1 ATTGCACTGACGGA-1 ATTGCACTGAGAGC-1 
#>             "01"             "01"             "01"             "01"           "0221" 
#> ATTGCACTGGAGCA-1 ATTGCACTTAGCCA-1 ATTGCACTTGCTTT-1 ATTGCTTGTTACTC-1 ATTGGTCTGACTAC-1 
#>            "021"             "01"           "0221"             "04"             "04" 
#> ATTGGTCTTGTCTT-1 ATTGTAGATTCCCG-1 ATTGTAGATTGCAG-1 ATTGTCTGCGTACA-1 ATTTAGGAACCATG-1 
#>             "04"           "0222"             "01"             "01"           "0221" 
#> ATTTAGGACAGAGG-1 ATTTCCGAGATGAA-1 ATTTCCGAGTGCTA-1 ATTTCGTGTATGGC-1 ATTTCTCTACTTTC-1 
#>             "01"             "01"             "01"             "03"           "0221" 
#> ATTTCTCTAGCAAA-1 ATTTCTCTCACTTT-1 ATTTCTCTTCCCAC-1 ATTTGCACAAGATG-1 CAAAGCACAGCTCA-1 
#>             "01"           "0221"             "01"            "021"             "01" 
#> CAAAGCACCGTAAC-1 CAAAGCACGGTAAA-1 CAAAGCTGAAAGTG-1 CAAAGCTGTTGCTT-1 CAAATATGTGACAC-1 
#>             "04"             "03"             "01"            "021"             "01" 
#> CAAATTGAGGGCAA-1 CAAATTGATGGAGG-1 CAACCAGAAAAGTG-1 CAACCAGAAGTGCT-1 CAACCAGAGTTCAG-1 
#>             "01"            "021"             "01"             "01"           "0222" 
#> CAACCAGATAGAAG-1 CAACCGCTGTTCAG-1 CAACCGCTTTGAGC-1 CAACGATGCGCAAT-1 CAACGTGACTCCAC-1 
#>            "021"             "01"             "01"           "0221"           "0222" 
#> CAACGTGAGCCATA-1 CAACGTGATCAAGC-1 CAAGAAGACCACAA-1 CAAGAAGACGTCTC-1 CAAGAAGATTCTAC-1 
#>             "03"            "021"             "03"           "0222"             "01" 
#> CAAGACTGACCTGA-1 CAAGACTGAGTAGA-1 CAAGCTGACCATAG-1 CAAGCTGATCTATC-1 CAAGGACTGTTCAG-1 
#>             "04"             "04"           "0221"             "03"             "01" 
#> CAAGGACTTCTTTG-1 CAAGGTTGCTCCAC-1 CAAGGTTGTCATTC-1 CAAGGTTGTCTGGA-1 CAAGTCGAAACAGA-1 
#>             "03"             "01"             "04"             "03"             "04" 
#> CAAGTCGATAGCGT-1 CAATAAACGCCATA-1 CAATAATGAACTGC-1 CAATATGACATGGT-1 CAATATGACCTTCG-1 
#>            "021"            "021"            "021"             "01"             "03" 
#> CAATATGACGTTAG-1 CAATATGAGGAGCA-1 CAATCGGAGAAACA-1 CAATCTACTGACTG-1 CAATTCACCCAACA-1 
#>             "01"             "01"             "01"             "03"             "03" 
#> CAATTCACGATAGA-1 CAATTCACTTGTGG-1 CAATTCTGCTTGTT-1 CAATTCTGGCGTAT-1 CACAACGATACGAC-1 
#>             "01"             "01"           "0222"           "0221"             "01" 
#> CACAATCTTGTTCT-1 CACAATCTTTCCAT-1 CACACCTGCTTGAG-1 CACACCTGTATGGC-1 CACAGAACCCTTGC-1 
#>             "01"             "01"             "01"             "01"             "04" 
#> CACAGAACCTGATG-1 CACAGATGGGATTC-1 CACAGATGGTTTCT-1 CACAGCCTGATACC-1 CACAGCCTTGCCAA-1 
#>             "01"             "01"            "021"             "01"           "0221" 
#> CACAGCCTTGTAGC-1 CACAGTGATGAAGA-1 CACATACTACAGCT-1 CACATGGAACACGT-1 CACATGGAAGTCGT-1 
#>             "01"            "021"             "03"             "01"             "01" 
#> CACCACTGCCAACA-1 CACCACTGGCGAAG-1 CACCCATGTTCTGT-1 CACCGGGAATCGAC-1 CACCGGGACGAGAG-1 
#>             "01"             "03"             "03"             "01"             "03" 
#> CACCGGGACGTGTA-1 CACCGGGACTTCTA-1 CACCGGGACTTGCC-1 CACCGGGATTCGGA-1 CACCGTACTAAGGA-1 
#>             "01"             "03"             "03"             "03"             "04" 
#> CACCGTACTAGCGT-1 CACCTGACACCCAA-1 CACCTGACCAGAAA-1 CACCTGACCTCAAG-1 CACCTGACGAAAGT-1 
#>             "01"             "03"             "01"             "03"             "04" 
#> CACCTGACTCGTAG-1 CACGAAACTTCCGC-1 CACGACCTCGATAC-1 CACGCTACAGAAGT-1 CACGCTACTGTTCT-1 
#>             "01"             "04"             "04"             "01"             "04" 
#> CACGGGACAGAGTA-1 CACGGGACATAAGG-1 CACGGGACGTAGGG-1 CACGGGTGCTTCGC-1 CACGGGTGGAGGAC-1 
#>             "01"             "01"             "01"             "03"             "03" 
#> CACGGGTGTGTTTC-1 CACTAACTCCTAAG-1 CACTAACTGAAAGT-1 CACTAGGATGATGC-1 CACTATACCCCGTT-1 
#>             "01"             "04"             "01"             "04"             "04" 
#> CACTATACGTTTGG-1 CACTGAGACAGTCA-1 CACTGCACTTCATC-1 CACTGCTGAGACTC-1 CACTGCTGGAAAGT-1 
#>             "03"            "021"             "01"           "0221"             "01" 
#> CACTTAACCGAATC-1 CACTTAACCGTACA-1 CACTTTGACTCTAT-1 CACTTTGAGCTGTA-1 CAGAAGCTCTCAAG-1 
#>             "01"             "04"             "03"             "01"             "01" 
#> CAGACATGAACGGG-1 CAGACATGTCGACA-1 CAGACCCTAAGGTA-1 CAGACCCTAATGCC-1 CAGACCCTAGGAGC-1 
#>             "01"             "01"           "0221"             "01"             "01" 
#> CAGACTGAGTATGC-1 CAGATCGAATGTCG-1 CAGATCGACCTGAA-1 CAGATCGATATGGC-1 CAGATGACATTCTC-1 
#>             "01"             "04"             "01"             "01"             "03" 
#> CAGCAATGCCTTCG-1 CAGCAATGGAGGGT-1 CAGCAATGGTGCTA-1 CAGCAATGTCTACT-1 CAGCAATGTGACCA-1 
#>             "01"             "03"             "01"            "021"             "01" 
#> CAGCAATGTGAGGG-1 CAGCACCTAAGCCT-1 CAGCACCTAGGCGA-1 CAGCACCTGTAGGG-1 CAGCATGACAACCA-1 
#>            "021"             "01"             "01"           "0222"            "021" 
#> CAGCATGAGACGTT-1 CAGCCTACCCAACA-1 CAGCCTTGCTACCC-1 CAGCCTTGGGGACA-1 CAGCGGACACCCTC-1 
#>             "01"             "01"            "021"             "01"             "01" 
#> CAGCGGACCTTTAC-1 CAGCGTCTAAAGCA-1 CAGCGTCTTATCGG-1 CAGCTAGATGTGAC-1 CAGCTCTGAGGCGA-1 
#>             "03"             "01"             "01"            "021"             "01" 
#> CAGCTCTGCAAGCT-1 CAGCTCTGTCGTAG-1 CAGCTCTGTGTGGT-1 CAGGAACTAACTGC-1 CAGGAACTCTCAGA-1 
#>             "03"           "0222"             "03"             "01"            "021" 
#> CAGGCCGAACACCA-1 CAGGCCGAACACGT-1 CAGGCCGAACGACT-1 CAGGCCGAATCTCT-1 CAGGCCGACTAGCA-1 
#>             "01"             "01"             "01"           "0222"             "04" 
#> CAGGGCACCATACG-1 CAGGGCACCCAACA-1 CAGGGCACTCCCGT-1 CAGGTAACAGACTC-1 CAGGTATGAGTCGT-1 
#>             "04"             "01"             "01"            "021"             "01" 
#> CAGGTATGTGCTTT-1 CAGGTTGAGGATCT-1 CAGTGATGGACGGA-1 CAGTGATGGCTAAC-1 CAGTGATGGGACAG-1 
#>             "01"             "04"             "04"             "03"             "01" 
#> CAGTGATGTAAGGA-1 CAGTGATGTACGCA-1 CAGTGTGATGTCAG-1 CAGTTACTAAGGTA-1 CAGTTACTGATAGA-1 
#>             "04"             "04"             "01"             "04"             "01" 
#> CAGTTGGAAAGAGT-1 CAGTTGGACATACG-1 CAGTTTACACACGT-1 CAGTTTACCCCAAA-1 CATAAAACGGAGCA-1 
#>           "0222"             "01"             "03"             "01"            "021" 
#> CATAAATGAACTGC-1 CATAACCTTCTCCG-1 CATACTACCTCGAA-1 CATACTACCTGAAC-1 CATACTACGTACCA-1 
#>             "01"             "01"             "01"             "01"            "021" 
#> CATACTTGGGTTAC-1 CATAGTCTAATCGC-1 CATAGTCTCACTTT-1 CATATAGACTAAGC-1 CATATAGATCAGGT-1 
#>           "0221"             "01"             "01"            "021"             "04" 
#> CATCAACTAGAAGT-1 CATCAACTCCCTCA-1 CATCAGGACTTCCG-1 CATCAGGATAGCCA-1 CATCAGGATCCTAT-1 
#>             "01"             "01"             "03"             "03"           "0221" 
#> CATCAGGATGCACA-1 CATCAGGATTTCGT-1 CATCATACCGCATA-1 CATCATACGGAGCA-1 CATCATACTCAAGC-1 
#>           "0221"            "021"           "0222"             "04"             "01" 
#> CATCGCTGGGATCT-1 CATCGCTGTGGCAT-1 CATCGGCTATGCTG-1 CATCGGCTTTGGCA-1 CATCTCCTATGTGC-1 
#>             "01"             "04"             "01"             "01"             "04" 
#> CATCTCCTCGAACT-1 CATGAGACACGGGA-1 CATGAGACGTTGAC-1 CATGAGACTCGCCT-1 CATGCCACGGGTGA-1 
#>           "0222"             "04"             "03"             "01"             "01" 
#> CATGCCACTGCCAA-1 CATGCGCTAGTCAC-1 CATGCGCTCAGATC-1 CATGCGCTTTGCAG-1 CATGGCCTAGGGTG-1 
#>             "01"           "0221"            "021"           "0221"            "021" 
#> CATGGCCTGTGCAT-1 CATGTACTATCGTG-1 CATGTTACAGTCGT-1 CATGTTACCTGAGT-1 CATGTTTGGGGATG-1 
#>             "01"             "03"             "03"             "01"            "021" 
#> CATTACACACGGAG-1 CATTACACCAACTG-1 CATTACACGGAGTG-1 CATTACACTACTCT-1 CATTAGCTCCACAA-1 
#>             "04"             "03"             "01"             "01"            "021" 
#> CATTGACTAGCGGA-1 CATTGGGACTCGAA-1 CATTGTACAGCGTT-1 CATTGTACTCGATG-1 CATTGTACTTATCC-1 
#>            "021"             "01"             "01"             "04"             "01" 
#> CATTGTACTTTGCT-1 CATTGTTGCTAGTG-1 CATTTCGACTCTAT-1 CATTTCGAGATACC-1 CATTTGACCACACA-1 
#>           "0221"             "01"             "03"             "03"             "03" 
#> CATTTGACCCTGAA-1 CATTTGTGACGACT-1 CATTTGTGCATTGG-1 CATTTGTGCGGAGA-1 CATTTGTGGGATCT-1 
#>             "03"             "04"             "01"             "01"             "04" 
#> CCAAAGTGCTACGA-1 CCAAAGTGTGAGAA-1 CCAACCTGAAGTAG-1 CCAACCTGACGTAC-1 CCAACCTGTTCGCC-1 
#>           "0222"            "021"             "03"            "021"            "021" 
#> CCAAGAACCCAATG-1 CCAAGAACGTAGCT-1 CCAAGAACGTGTCA-1 CCAAGAACTACTGG-1 CCAAGAACTCCTAT-1 
#>             "01"             "01"             "01"             "03"             "04" 
#> CCAAGATGTCATTC-1 CCAAGATGTTTCAC-1 CCAAGTGAGGAACG-1 CCAAGTGATCAAGC-1 CCAATTTGAACGTC-1 
#>             "01"             "01"             "01"             "01"            "021" 
#> CCACCATGAACGTC-1 CCACCATGATCGGT-1 CCACCATGGACGAG-1 CCACCATGGGGAGT-1 CCACCATGTCCTGC-1 
#>             "01"             "01"           "0221"             "01"             "03" 
#> CCACTGACCCGCTT-1 CCACTGTGGGAAGC-1 CCACTGTGTGTAGC-1 CCACTTCTCGGGAA-1 CCAGAAACCCTGTC-1 
#>            "021"            "021"             "01"           "0222"             "04" 
#> CCAGAAACGAACTC-1 CCAGAAACGGTCTA-1 CCAGACCTCTGAGT-1 CCAGACCTTGTGGT-1 CCAGCACTGCGATT-1 
#>             "01"             "01"             "04"             "01"           "0221" 
#> CCAGCGGAAAGGCG-1 CCAGCGGACGACTA-1 CCAGCGGATGGGAG-1 CCAGCTACACAGTC-1 CCAGCTACCAGCTA-1 
#>            "021"            "021"             "01"             "01"             "04" 
#> CCAGGTCTACACCA-1 CCAGGTCTAGCATC-1 CCAGGTCTATGGTC-1 CCAGTCACACTGGT-1 CCAGTCACACTGTG-1 
#>             "04"            "021"             "01"            "021"             "04" 
#> CCAGTCACGTTGTG-1 CCAGTGCTAACCAC-1 CCAGTGCTCGTAGT-1 CCATCCGAAAGCAA-1 CCATCCGAACGACT-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> CCATCCGAAGGTTC-1 CCATCCGATTCGCC-1 CCATCGTGAACGGG-1 CCATCGTGCTAGAC-1 CCCAACACCTCGCT-1 
#>             "04"            "021"             "01"           "0221"             "04" 
#> CCCAACACGCATCA-1 CCCAACACTTTGTC-1 CCCAACTGCAATCG-1 CCCAGACTGCCTTC-1 CCCAGACTGGTTTG-1 
#>             "01"           "0222"            "021"           "0222"             "04" 
#> CCCAGACTTTCGCC-1 CCCAGTTGCAGTTG-1 CCCAGTTGGGTACT-1 CCCAGTTGTCTATC-1 CCCGATTGTGTTTC-1 
#>           "0221"           "0222"             "01"             "04"             "01" 
#> CCCGGAGAAGGGTG-1 CCCTACGAATTGGC-1 CCCTAGTGCAAAGA-1 CCCTCAGACACTTT-1 CCCTCAGACGAGAG-1 
#>            "021"            "021"             "01"             "04"             "01" 
#> CCCTCAGAGGTCAT-1 CCCTGAACTAAAGG-1 CCCTGATGCAACCA-1 CCCTGATGCAAGCT-1 CCCTTACTAACCAC-1 
#>             "01"             "04"             "01"             "04"           "0222" 
#> CCCTTACTGCAGTT-1 CCGAAAACCTTGTT-1 CCGACACTGGTTTG-1 CCGACTACCCAGTA-1 CCGACTACCGTGTA-1 
#>             "01"           "0221"             "01"           "0222"             "01" 
#> CCGACTACTGAGGG-1 CCGATAGACCTAAG-1 CCGATAGAGTTGGT-1 CCGCGAGACACACA-1 CCGCGAGAGGTTCA-1 
#>             "01"             "01"           "0222"            "021"             "01" 
#> CCGCTATGGGACGA-1 CCGCTATGTGCAAC-1 CCGCTATGTGCACA-1 CCGGTACTGTCCTC-1 CCGTACACAAGCAA-1 
#>             "04"           "0222"            "021"             "01"             "01" 
#> CCGTACACAGCGTT-1 CCGTACACGTCATG-1 CCGTACACGTTGGT-1 CCGTACACTAACGC-1 CCTAAACTTTCGTT-1 
#>             "04"             "03"           "0222"             "01"             "01" 
#> CCTAAGGACCCAAA-1 CCTAAGGACTAGCA-1 CCTAAGGAGGGCAA-1 CCTAAGGATGATGC-1 CCTAAGGATGTCAG-1 
#>             "01"            "021"             "03"             "01"             "01" 
#> CCTACCGACTCTTA-1 CCTACCGAGGGATG-1 CCTAGAGAGGTGAG-1 CCTATAACCAAAGA-1 CCTATAACGAGACG-1 
#>             "01"             "04"             "04"             "01"            "021" 
#> CCTATAACTCAGAC-1 CCTATAACTGCATG-1 CCTCGAACACTTTC-1 CCTCGAACCCGTAA-1 CCTCGAACGTATCG-1 
#>             "01"           "0221"             "03"           "0221"             "01" 
#> CCTCGAACTTACTC-1 CCTCTACTCTTCGC-1 CCTCTACTGGCATT-1 CCTGACTGAAGTAG-1 CCTGACTGGGGAGT-1 
#>             "01"            "021"             "01"             "01"             "01" 
#> CCTGACTGTGTCTT-1 CCTGCAACACGTTG-1 CCTGGACTCGTGAT-1 CCTTAATGCCCAAA-1 CCTTAATGTTCTAC-1 
#>             "04"            "021"             "01"             "04"           "0221" 
#> CCTTCACTACGACT-1 CCTTCACTCAGTCA-1 CCTTCACTGGAGTG-1 CCTTTAGATTCATC-1 CGAACATGCCCTAC-1 
#>             "01"             "04"            "021"            "021"            "021" 
#> CGAACATGTCAGAC-1 CGAAGACTGGAACG-1 CGAAGACTGTTACG-1 CGAAGGGAAACCTG-1 CGAAGGGATCCGAA-1 
#>             "01"             "01"             "01"             "03"             "04" 
#> CGAAGTACCAACTG-1 CGAATCGAGGAGCA-1 CGAATCGAGGAGGT-1 CGACAAACCCATAG-1 CGACAAACCGACAT-1 
#>             "04"            "021"             "01"             "01"             "04" 
#> CGACCACTAAAGTG-1 CGACCACTGCCAAT-1 CGACCGGAAGGTCT-1 CGACCGGATGGAAA-1 CGACCTTGCTAGTG-1 
#>             "03"             "03"             "01"             "01"             "01" 
#> CGACGTCTATCGTG-1 CGACGTCTCGTGTA-1 CGACGTCTGAGGCA-1 CGACTCACGTCGTA-1 CGACTCACGTTGCA-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> CGACTCTGTGTGAC-1 CGACTGCTTCCTCG-1 CGAGAACTAAGGCG-1 CGAGAACTACGTTG-1 CGAGAACTTGTTCT-1 
#>             "01"            "021"             "03"             "01"            "021" 
#> CGAGATTGGACACT-1 CGAGATTGGCCATA-1 CGAGCCGAACACCA-1 CGAGCCGAGGCGAA-1 CGAGCGTGCTCCAC-1 
#>             "03"             "03"             "01"             "01"             "01" 
#> CGAGCGTGGATACC-1 CGAGCGTGTATGCG-1 CGAGGAGACCTCCA-1 CGAGGAGATGTCGA-1 CGAGGCACCTATGG-1 
#>             "01"            "021"             "04"             "01"             "03" 
#> CGAGGCACTATGCG-1 CGAGGCACTCTTCA-1 CGAGGCTGACGCTA-1 CGAGGCTGGCAGTT-1 CGAGGGCTACGACT-1 
#>           "0222"             "01"             "03"            "021"             "04" 
#> CGAGGGCTCGAATC-1 CGAGTATGTCACCC-1 CGATACGAACAGTC-1 CGATACGACAGGAG-1 CGATACGATTCACT-1 
#>             "01"           "0221"           "0222"             "03"             "04" 
#> CGATAGACCCGTAA-1 CGATAGACCGTACA-1 CGATAGACGTAGGG-1 CGATAGACTGTTCT-1 CGATCAGAAGAACA-1 
#>            "021"             "01"            "021"             "01"             "03" 
#> CGATCAGAGAGGGT-1 CGATCAGAGGTACT-1 CGATCAGATGTGAC-1 CGATCCACCGGGAA-1 CGATCCACTTCCAT-1 
#>             "01"             "01"           "0222"             "03"             "04" 
#> CGCAAATGCTCGAA-1 CGCAACCTCCTTGC-1 CGCAACCTGGACGA-1 CGCACGGAGGACGA-1 CGCACGGATCTTTG-1 
#>             "01"             "01"             "01"             "04"             "01" 
#> CGCACTACAGAATG-1 CGCACTACAGCCAT-1 CGCACTACATTGGC-1 CGCACTACTCGCCT-1 CGCACTACTCGTGA-1 
#>             "01"             "01"             "01"             "04"             "01" 
#> CGCACTTGTCACGA-1 CGCAGGACAGATCC-1 CGCAGGACCTACTT-1 CGCAGGACTTGTCT-1 CGCAGGTGCACTGA-1 
#>            "021"             "01"             "01"           "0221"             "01" 
#> CGCAGGTGCCATAG-1 CGCAGGTGGGAACG-1 CGCATAGATCACGA-1 CGCCATACTGCAAC-1 CGCCATTGAGAGGC-1 
#>           "0221"             "01"            "021"             "01"             "01" 
#> CGCCATTGCTATGG-1 CGCCATTGGAGACG-1 CGCCATTGGAGCAG-1 CGCCATTGTACTGG-1 CGCCGAGAGCTTAG-1 
#>             "01"             "01"             "04"             "04"             "03" 
#> CGCCTAACGAATGA-1 CGCCTAACTGCTCC-1 CGCGAGACACAGCT-1 CGCGAGACAGGTCT-1 CGCGAGACGCTACA-1 
#>           "0222"             "01"             "01"             "04"             "01" 
#> CGCGATCTCAGTCA-1 CGCGATCTGTTGAC-1 CGCGATCTTTCTTG-1 CGCGGATGGCCAAT-1 CGCTAAGAATGTCG-1 
#>            "021"            "021"             "04"             "01"             "01" 
#> CGCTAAGACAACTG-1 CGCTAAGACCCTTG-1 CGCTACTGAACAGA-1 CGCTACTGAGAACA-1 CGCTACTGTGAGCT-1 
#>             "01"             "01"           "0222"             "01"             "01" 
#> CGCTACTGTTCCCG-1 CGCTCATGCATTTC-1 CGGAATTGGTTTGG-1 CGGAATTGTGGAGG-1 CGGACCGATGCGTA-1 
#>             "03"            "021"             "01"             "01"             "03" 
#> CGGACCGATGGGAG-1 CGGACTCTAAACAG-1 CGGACTCTCCAATG-1 CGGACTCTCCTCGT-1 CGGAGGCTATTCCT-1 
#>             "01"             "04"             "01"             "03"             "01" 
#> CGGAGGCTTGGATC-1 CGGATAACAACGAA-1 CGGATAACAGCTCA-1 CGGATAACTCAGTG-1 CGGCACGAACTCAG-1 
#>             "01"            "021"             "01"            "021"             "01" 
#> CGGCACGAAGGGTG-1 CGGCACGACTACGA-1 CGGCATCTTAGAAG-1 CGGCATCTTCGTAG-1 CGGCCAGAAAGGTA-1 
#>             "01"           "0221"             "01"            "021"             "01" 
#> CGGCCAGAGAGGCA-1 CGGCGAACCAGTCA-1 CGGCGAACGACAAA-1 CGGCGAACGGTCTA-1 CGGCGAACTACTTC-1 
#>             "03"           "0222"             "03"             "01"             "03" 
#> CGGGACTGCGTGTA-1 CGGGACTGGAATAG-1 CGGGCATGACCCAA-1 CGGGCATGTCTCTA-1 CGGGCATGTTGTGG-1 
#>             "01"             "03"             "03"             "03"             "01" 
#> CGGTAAACTCGCAA-1 CGGTCACTGTTTGG-1 CGGTCACTTACTTC-1 CGTAACGATCGCCT-1 CGTACCACACACAC-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> CGTACCACACGTTG-1 CGTACCACCTCATT-1 CGTACCACGGAGCA-1 CGTACCTGGCATCA-1 CGTAGCCTCTCTCG-1 
#>             "01"             "01"             "01"             "03"            "021" 
#> CGTAGCCTGCGAAG-1 CGTAGCCTGTATGC-1 CGTCAAGAAAGGTA-1 CGTCAAGAACGTGT-1 CGTCAAGACAGAGG-1 
#>             "01"           "0221"            "021"             "01"             "01" 
#> CGTCAAGACAGGAG-1 CGTCCATGCTCTTA-1 CGTCGACTTTCCGC-1 CGTGATGACGCTAA-1 CGTGATGAGGTTCA-1 
#>             "03"             "01"             "01"             "01"             "01" 
#> CGTGCACTTATGGC-1 CGTGTAGAAAAACG-1 CGTGTAGACGATAC-1 CGTGTAGAGTTACG-1 CGTGTAGAGTTCAG-1 
#>           "0222"             "01"             "03"             "03"            "021" 
#> CGTGTAGATTCGGA-1 CGTTAGGAAACCAC-1 CGTTAGGATCATTC-1 CGTTATACCCTGAA-1 CGTTTAACTGGTCA-1 
#>             "03"             "01"           "0222"             "03"             "01" 
#> CTAAACCTCTGACA-1 CTAAACCTGTGCAT-1 CTAACACTAACGTC-1 CTAACACTAGTGCT-1 CTAACGGAACCGAT-1 
#>             "03"             "04"             "01"           "0222"             "03" 
#> CTAACGGATTTCTG-1 CTAACTACGGCAAG-1 CTAAGGACACCATG-1 CTAAGGACCGTTAG-1 CTAAGGACGCCATA-1 
#>             "01"             "01"             "01"             "01"            "021" 
#> CTAAGGTGCCTAAG-1 CTAAGGTGTTGCAG-1 CTAAGGTGTTTCTG-1 CTAATAGAGCTATG-1 CTAATGCTTGTGGT-1 
#>             "04"             "01"             "01"             "01"            "021" 
#> CTACAACTCCCGTT-1 CTACCTCTCAACCA-1 CTACGCACACCTAG-1 CTACGCACTCTCCG-1 CTACGCACTGGTCA-1 
#>             "03"             "01"           "0221"             "01"             "03" 
#> CTACGGCTTTCTTG-1 CTACTATGAACCAC-1 CTACTATGATGTGC-1 CTACTATGCTAAGC-1 CTACTATGTAAAGG-1 
#>           "0222"            "021"            "021"             "01"             "04" 
#> CTACTCCTATGTCG-1 CTACTCCTGCCATA-1 CTAGAGACACTTTC-1 CTAGAGACAGCATC-1 CTAGAGACTTTGGG-1 
#>             "03"            "021"             "01"             "03"           "0221" 
#> CTAGATCTCTCTAT-1 CTAGATCTTCGACA-1 CTAGGATGAGCCTA-1 CTAGGATGATCGTG-1 CTAGGCCTCTCAGA-1 
#>             "01"             "01"             "04"             "04"             "01" 
#> CTAGGTGATGGTTG-1 CTAGTTACCAGAGG-1 CTAGTTACCGCATA-1 CTAGTTACGAAACA-1 CTATAAGATCGTTT-1 
#>           "0221"             "01"             "01"             "03"             "04" 
#> CTATACTGAGGTTC-1 CTATACTGCCAGTA-1 CTATACTGCGCTAA-1 CTATACTGCTACGA-1 CTATACTGTCTCAT-1 
#>            "021"             "01"            "021"             "03"             "03" 
#> CTATACTGTTCGTT-1 CTATAGCTGTCACA-1 CTATAGCTTCGCTC-1 CTATAGCTTGCCTC-1 CTATCAACGAACTC-1 
#>             "01"             "01"            "021"            "021"             "01" 
#> CTATCAACGCAGAG-1 CTATCAACTTTGGG-1 CTATCCCTCCACCT-1 CTATGTACGAGAGC-1 CTATGTACGCTTAG-1 
#>             "01"             "01"            "021"             "01"             "01" 
#> CTATGTACTGTTTC-1 CTATGTTGAAAGCA-1 CTATGTTGTCCTCG-1 CTATGTTGTCTCGC-1 CTATTGACAAACGA-1 
#>             "04"             "01"             "01"             "01"            "021" 
#> CTATTGACACTGGT-1 CTATTGACGGTGAG-1 CTATTGTGGCAAGG-1 CTCAATTGGTTCAG-1 CTCAATTGGTTGCA-1 
#>           "0222"           "0222"             "01"             "01"            "021" 
#> CTCAGAGATAGAAG-1 CTCAGCACTCTAGG-1 CTCAGCACTGAACC-1 CTCAGCACTTGCAG-1 CTCAGCTGAACCTG-1 
#>             "01"             "01"            "021"             "01"            "021" 
#> CTCAGCTGCAGTTG-1 CTCAGGCTCGTTGA-1 CTCAGGCTGCTAAC-1 CTCATTGACCTTAT-1 CTCATTGATGCTTT-1 
#>             "01"           "0221"             "01"             "01"           "0222" 
#> CTCCACGAGAGATA-1 CTCCATCTCTTAGG-1 CTCCATCTGACGAG-1 CTCCGAACAAGTGA-1 CTCCTACTGCCTTC-1 
#>           "0222"             "01"             "01"           "0221"            "021" 
#> CTCGAAGATGTGGT-1 CTCGAAGATTAGGC-1 CTCGACTGCTCTAT-1 CTCGACTGGGTGAG-1 CTCGACTGGTTGAC-1 
#>             "01"            "021"             "01"             "01"             "03" 
#> CTCGAGCTCTGGAT-1 CTCGCATGACTTTC-1 CTCGCATGCTTAGG-1 CTCTAAACCTCGAA-1 CTCTAAACGGCGAA-1 
#>             "03"             "01"             "01"             "01"             "01" 
#> CTCTAATGTCCAAG-1 CTGAACGACAGTCA-1 CTGAACGATGAGGG-1 CTGAAGACCCAACA-1 CTGAAGACGTGCAT-1 
#>            "021"             "01"             "01"             "01"             "04" 
#> CTGAAGTGAAGCCT-1 CTGAAGTGCAGCTA-1 CTGAAGTGGCTATG-1 CTGAAGTGTCCAGA-1 CTGAATCTGAATAG-1 
#>           "0221"             "04"             "01"             "01"             "01" 
#> CTGACAGAATCGTG-1 CTGACCACAGCAAA-1 CTGAGAACCGGGAA-1 CTGAGAACGTAAAG-1 CTGATACTAGTAGA-1 
#>             "03"             "01"             "01"             "03"             "01" 
#> CTGATTTGGTGTTG-1 CTGCAGCTAACCGT-1 CTGCAGCTGACACT-1 CTGCAGCTGGATTC-1 CTGCAGCTTGGCAT-1 
#>           "0222"             "01"             "01"           "0222"             "01" 
#> CTGCCAACAGGAGC-1 CTGCCAACCAGCTA-1 CTGCCAACTAACCG-1 CTGCCAACTGCTCC-1 CTGCCAACTTGCAG-1 
#>             "01"             "01"            "021"             "03"             "01" 
#> CTGCCAACTTGCTT-1 CTGCGACTCCACCT-1 CTGGAAACAAACGA-1 CTGGAAACATCGAC-1 CTGGATGACTGGAT-1 
#>             "01"             "03"             "03"             "01"             "03" 
#> CTGGATGACTTGTT-1 CTGGATGATGTGAC-1 CTGGCACTCAAGCT-1 CTGTAACTAACCAC-1 CTGTAACTAGCGTT-1 
#>             "01"             "04"            "021"             "01"             "01" 
#> CTGTATACGTAAAG-1 CTGTATACGTACGT-1 CTGTATACGTTGGT-1 CTGTGAGACAACCA-1 CTGTGAGACCTTGC-1 
#>             "01"           "0222"             "01"           "0221"             "03" 
#> CTGTGAGACGAACT-1 CTGTGAGACTGTAG-1 CTTAAAGAACCTGA-1 CTTAACACCTGTAG-1 CTTAACACTATCGG-1 
#>            "021"            "021"             "01"             "01"             "04" 
#> CTTAAGCTACCTAG-1 CTTAAGCTAGTACC-1 CTTAAGCTCATCAG-1 CTTAAGCTCCGCTT-1 CTTACAACTAACGC-1 
#>             "01"             "01"             "01"             "04"             "01" 
#> CTTACAACTCCCGT-1 CTTACTGACGTACA-1 CTTAGACTAAACGA-1 CTTAGGGACTTGCC-1 CTTAGGGAGAATCC-1 
#>            "021"             "01"             "01"             "01"             "01" 
#> CTTATCGACTCATT-1 CTTCACCTACCTGA-1 CTTCATGAAGCATC-1 CTTCATGAAGTACC-1 CTTCATGACCGAAT-1 
#>             "01"           "0221"             "04"             "01"             "01" 
#> CTTGAACTACGCAT-1 CTTGATTGAGGTTC-1 CTTGATTGATCTTC-1 CTTGATTGCATTCT-1 CTTGATTGTTTCGT-1 
#>             "01"             "03"            "021"             "01"             "01" 
#> CTTGTATGACACCA-1 CTTGTATGCGCAAT-1 CTTTACGAGCGAAG-1 CTTTAGACCGTGAT-1 CTTTAGACGAGACG-1 
#>             "04"             "04"             "01"             "01"             "01" 
#> CTTTAGACGATACC-1 CTTTAGACGTTGGT-1 CTTTAGACTCATTC-1 CTTTAGTGACGGGA-1 CTTTAGTGGGTGGA-1 
#>             "01"             "01"             "01"             "03"             "01" 
#> CTTTCAGAGAAACA-1 CTTTGATGAGCACT-1 CTTTGATGTCTAGG-1 CTTTGATGTGTCCC-1 CTTTGATGTGTGGT-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> GAAACAGAACTACG-1 GAAACAGAATCACG-1 GAAACAGACATTCT-1 GAAACCTGATCGTG-1 GAAACCTGATGCCA-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> GAAACCTGCTTATC-1 GAAACCTGGACTAC-1 GAAACCTGTGCTAG-1 GAAAGATGATTTCC-1 GAAAGATGCTGATG-1 
#>             "01"           "0221"             "01"             "01"           "0221" 
#> GAAAGATGCTTCGC-1 GAAAGATGTAAGGA-1 GAAAGCCTACGTTG-1 GAAAGTGAAAGTGA-1 GAAAGTGACCACAA-1 
#>            "021"             "01"             "04"           "0222"            "021" 
#> GAAAGTGACTCAAG-1 GAAATACTACCAAC-1 GAAATACTCTTAGG-1 GAAATACTTCCTCG-1 GAACACACGTGCAT-1 
#>             "01"            "021"             "04"             "03"           "0222" 
#> GAACACACTGCCTC-1 GAACAGCTAACTGC-1 GAACAGCTCTCAGA-1 GAACCAACCACAAC-1 GAACCAACTTCCGC-1 
#>             "01"           "0221"           "0221"             "01"             "03" 
#> GAACCTGAACGTGT-1 GAACCTGAGAGACG-1 GAACCTGATGAACC-1 GAACGGGATACTTC-1 GAACTGTGACCTGA-1 
#>             "01"             "01"             "01"             "01"           "0221" 
#> GAACTGTGCCAGTA-1 GAAGAATGCAATCG-1 GAAGCGGACCTATT-1 GAAGCTACGAATGA-1 GAAGCTACGGTTTG-1 
#>            "021"             "01"           "0222"           "0222"             "03" 
#> GAAGGGTGAAAGTG-1 GAAGGGTGCTTAGG-1 GAAGGTCTGAAAGT-1 GAAGGTCTGTTGCA-1 GAAGGTCTTAAAGG-1 
#>             "01"            "021"             "03"             "01"           "0222" 
#> GAAGTAGACTCCCA-1 GAAGTAGATCCAAG-1 GAAGTCACCCTCGT-1 GAAGTCACCCTGTC-1 GAAGTCTGTCGCAA-1 
#>             "03"           "0221"            "021"             "04"             "04" 
#> GAAGTCTGTTCTGT-1 GAAGTGCTAAACGA-1 GAAGTGCTCCGCTT-1 GAAGTGCTTAACCG-1 GAATGCACCCTAAG-1 
#>             "01"             "03"           "0222"             "01"             "01" 
#> GAATGCACCTTCGC-1 GAATGCTGCGGTAT-1 GAATTAACGATAAG-1 GAATTAACGGTCAT-1 GAATTAACGTCGTA-1 
#>             "03"             "01"             "01"             "01"             "03" 
#> GAATTAACTGAAGA-1 GACAACACAGGCGA-1 GACAACACATCGTG-1 GACAACACTCGCCT-1 GACAACTGAGGTTC-1 
#>             "04"             "01"             "01"             "01"             "01" 
#> GACAGGGAAGAGTA-1 GACAGGGAATGCCA-1 GACAGTACGAGCTT-1 GACAGTACTTCGGA-1 GACAGTTGAGTAGA-1 
#>             "04"             "01"           "0221"           "0221"             "04" 
#> GACATTCTCCACCT-1 GACCAAACGACTAC-1 GACCAAACGTATCG-1 GACCCTACTAAAGG-1 GACCTAGACCTCAC-1 
#>           "0222"            "021"            "021"             "04"             "01" 
#> GACCTAGACGAGAG-1 GACCTCACAAGGTA-1 GACCTCACGTACGT-1 GACCTCTGCATCAG-1 GACGAACTCCCACT-1 
#>             "01"             "01"           "0222"             "01"             "01" 
#> GACGATTGCCAATG-1 GACGCCGACCTTCG-1 GACGCTCTCTCTCG-1 GACGGCACACGGGA-1 GACGGCACGAGATA-1 
#>             "04"             "01"             "03"             "03"           "0222" 
#> GACGTAACCTATGG-1 GACGTAACCTGTGA-1 GACGTAACTATGGC-1 GACGTATGTTGACG-1 GACGTATGTTTGCT-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> GACGTCCTACGGAG-1 GACGTCCTCTCAAG-1 GACGTCCTGATAAG-1 GACTACGATGGTCA-1 GACTCCTGCTCGCT-1 
#>             "01"            "021"             "04"             "04"             "01" 
#> GACTCCTGGGTTAC-1 GACTCCTGTTATCC-1 GACTCCTGTTGGTG-1 GACTGAACCAATCG-1 GACTGATGTGATGC-1 
#>             "01"             "01"            "021"            "021"             "01" 
#> GACTTTACATGCCA-1 GACTTTACGACAGG-1 GAGAAATGTTCTCA-1 GAGATAGAAAAAGC-1 GAGATCACGACAAA-1 
#>             "01"             "04"             "04"           "0222"           "0221" 
#> GAGATGCTCTGGAT-1 GAGATGCTGAATGA-1 GAGCAGGATTCCCG-1 GAGCATACTTTGCT-1 GAGCGCACGCGTAT-1 
#>             "03"             "01"             "03"           "0221"            "021" 
#> GAGCGCACGGTGAG-1 GAGCGCTGAAGATG-1 GAGCGCTGTCTTAC-1 GAGCGGCTGGGAGT-1 GAGGACGACTCAGA-1 
#>             "01"             "03"            "021"             "04"             "01" 
#> GAGGATCTGAAAGT-1 GAGGCAGACTTGCC-1 GAGGGAACACCAGT-1 GAGGGAACGAGGGT-1 GAGGGATGGGAAAT-1 
#>             "04"             "03"             "01"             "01"             "01" 
#> GAGGGCCTTCACCC-1 GAGGGTGAAGAGTA-1 GAGGTACTACGGTT-1 GAGGTACTACTCAG-1 GAGGTACTGACACT-1 
#>             "01"             "01"             "01"            "021"             "03" 
#> GAGGTACTGGGAGT-1 GAGGTACTTAGCGT-1 GAGGTGGAGTACGT-1 GAGGTGGATCCTCG-1 GAGGTTACTCGTTT-1 
#>             "01"           "0222"             "01"             "03"           "0222" 
#> GAGGTTTGTAAGCC-1 GAGTCAACCATTCT-1 GAGTCAACGGGAGT-1 GAGTCTGATCGTGA-1 GAGTCTGATTTGGG-1 
#>            "021"             "01"             "01"             "01"             "04" 
#> GAGTGACTCAGCTA-1 GAGTGACTCGGTAT-1 GAGTGACTCTTGCC-1 GAGTGACTGACTAC-1 GAGTGACTGTCTAG-1 
#>             "03"             "03"             "04"             "04"             "01" 
#> GAGTGGGAGTCTTT-1 GAGTGGGATGCCCT-1 GAGTGGGATGCTGA-1 GAGTGTTGCTGTAG-1 GAGTGTTGTGGTCA-1 
#>             "04"             "01"             "04"             "01"             "01" 
#> GAGTTGTGCATGGT-1 GAGTTGTGCTGAGT-1 GAGTTGTGGCGAGA-1 GAGTTGTGGTAGCT-1 GAGTTGTGTATGCG-1 
#>            "021"             "03"            "021"             "03"           "0221" 
#> GATAAGGAGAAACA-1 GATAAGGATTCACT-1 GATACTCTATCGGT-1 GATACTCTTACTTC-1 GATACTCTTGACTG-1 
#>            "021"            "021"             "01"             "01"            "021" 
#> GATAGAGAAGGGTG-1 GATAGAGACTGTGA-1 GATAGAGATCACGA-1 GATAGCACCCATAG-1 GATAGCACGAAGGC-1 
#>             "03"             "01"            "021"             "01"           "0222" 
#> GATAGCACTTGTCT-1 GATATAACAAGGTA-1 GATATAACACGCAT-1 GATATATGCTGGAT-1 GATATATGTCCGTC-1 
#>             "01"             "01"             "01"             "01"             "03" 
#> GATATATGTGGAGG-1 GATATCCTAGAAGT-1 GATATCCTCCCGTT-1 GATATTGACAGGAG-1 GATATTGACGAGTT-1 
#>            "021"             "01"            "021"             "03"           "0221" 
#> GATATTGAGCCAAT-1 GATCCCTGACCTTT-1 GATCCCTGTGTAGC-1 GATCCGCTGGTCAT-1 GATCGAACCGAGAG-1 
#>             "01"             "03"             "03"            "021"             "01" 
#> GATCGATGACTAGC-1 GATCGATGGTAAAG-1 GATCGATGTAAGGA-1 GATCGTGACACTAG-1 GATCGTGATTCACT-1 
#>             "04"             "04"            "021"             "01"             "01" 
#> GATCTACTGGTGAG-1 GATCTACTTTGCAG-1 GATCTTACACCCAA-1 GATCTTACCCTACC-1 GATCTTACGAATAG-1 
#>             "01"             "04"           "0221"             "01"            "021" 
#> GATCTTACGAGATA-1 GATGCAACTCCAGA-1 GATGCCCTACGTAC-1 GATGCCCTCTCATT-1 GATGCCCTGGCAAG-1 
#>            "021"             "01"             "01"             "01"            "021" 
#> GATGCCCTTTTGCT-1 GATTACCTTGTTCT-1 GATTCGGAACGACT-1 GATTCGGACAGGAG-1 GATTCGGAGAAGGC-1 
#>             "01"             "01"             "01"           "0222"           "0221" 
#> GATTCTTGATTCGG-1 GATTCTTGCCGATA-1 GATTCTTGCGAGTT-1 GATTGGACCCGTTC-1 GATTGGACGGTGTT-1 
#>           "0222"             "01"             "04"             "04"             "04" 
#> GATTGGACTTTCGT-1 GATTGGTGTGTCAG-1 GATTTAGACACTCC-1 GATTTAGACTAAGC-1 GATTTAGATTCGTT-1 
#>             "04"             "01"           "0221"             "04"            "021" 
#> GATTTGCTAACGAA-1 GATTTGCTAACGGG-1 GCAACCCTCCTCGT-1 GCAACTGATTGCGA-1 GCAAGACTACTGGT-1 
#>             "01"            "021"            "021"             "01"             "01" 
#> GCAAGACTAGGTCT-1 GCAAGACTCCCTTG-1 GCAATCGACTGCAA-1 GCAATCGAGACGTT-1 GCAATCGATCCTTA-1 
#>             "01"             "01"             "01"           "0222"            "021" 
#> GCAATTCTCGTGTA-1 GCAATTCTTCTCCG-1 GCACAAACAATGCC-1 GCACAAACGGTACT-1 GCACAATGGTGCAT-1 
#>             "01"             "01"             "01"             "01"            "021" 
#> GCACACCTGTGCTA-1 GCACCACTCATGAC-1 GCACCACTGTTTGG-1 GCACCACTTCCTTA-1 GCACCACTTTCGGA-1 
#>             "03"            "021"            "021"             "03"            "021" 
#> GCACCTACGCGATT-1 GCACCTTGGCTGTA-1 GCACCTTGGGGAGT-1 GCACGGACCAGCTA-1 GCACGGTGACCTCC-1 
#>             "01"             "01"           "0222"             "01"             "01" 
#> GCACGGTGCTATGG-1 GCACTAGAACGGGA-1 GCACTAGAAGATGA-1 GCACTAGACCTTTA-1 GCACTAGACGTAAC-1 
#>           "0222"             "01"             "04"           "0221"             "04" 
#> GCACTAGAGTCGTA-1 GCACTAGATGCAAC-1 GCACTGCTGAGGCA-1 GCAGATACAGCGTT-1 GCAGATACGACGGA-1 
#>             "03"             "01"             "01"             "01"             "01" 
#> GCAGATACGCAGAG-1 GCAGCCGACAGTCA-1 GCAGCGTGCACTCC-1 GCAGCTCTCAATCG-1 GCAGCTCTGTTTCT-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> GCAGGGCTAAGAAC-1 GCAGGGCTAAGGGC-1 GCAGGGCTATCGAC-1 GCAGGGCTTGGGAG-1 GCAGTCCTAACTGC-1 
#>             "01"             "01"             "03"             "03"             "01" 
#> GCAGTCCTCTCTTA-1 GCATCAGATGCGTA-1 GCATGTGACAAGCT-1 GCATTGGAGAAGGC-1 GCCAAAACGAGGCA-1 
#>             "01"             "01"             "01"             "01"             "03" 
#> GCCAAATGATCGAC-1 GCCAACCTACGGTT-1 GCCAACCTCGCCTT-1 GCCACGGAGGCGAA-1 GCCACGGATACTGG-1 
#>             "01"             "01"             "01"            "021"             "01" 
#> GCCACTACGTCTTT-1 GCCCAACTACCGAT-1 GCCCAACTATGGTC-1 GCCCATACAGCGTT-1 GCCGACGAACTCTT-1 
#>             "01"             "01"             "03"             "03"           "0222" 
#> GCCGAGTGCGTTGA-1 GCCGGAACGAACTC-1 GCCGGAACGTTCTT-1 GCCGGAACTGCACA-1 GCCGGAACTTACTC-1 
#>             "01"             "03"             "03"             "03"             "01" 
#> GCCGTACTACCTGA-1 GCCGTACTGGCAAG-1 GCCTACACAGTTCG-1 GCCTACACCACTGA-1 GCCTACACCTTGAG-1 
#>             "01"            "021"             "03"           "0221"             "01" 
#> GCCTAGCTACGGAG-1 GCCTAGCTCTATTC-1 GCCTAGCTTCTCAT-1 GCCTAGCTTCTCTA-1 GCCTCAACCATGGT-1 
#>             "04"             "01"             "01"           "0221"             "01" 
#> GCCTCAACTCTTTG-1 GCCTCATGTCTTAC-1 GCCTGACTCTCAAG-1 GCGAAGGAACTCTT-1 GCGAAGGATGCCAA-1 
#>             "03"             "01"            "021"             "01"             "01" 
#> GCGAGAGAGGGACA-1 GCGAGCACTGTCGA-1 GCGAGCACTTGACG-1 GCGAGCACTTGCTT-1 GCGATATGGTACGT-1 
#>             "01"             "04"             "01"            "021"             "01" 
#> GCGATATGGTGTTG-1 GCGCACGAAGTCGT-1 GCGCACGACTTTAC-1 GCGCATCTAGGTCT-1 GCGCATCTGGTTAC-1 
#>             "01"             "01"            "021"             "01"             "01" 
#> GCGCATCTTCGATG-1 GCGCATCTTGCTCC-1 GCGCATCTTTCTAC-1 GCGCGAACGTTCTT-1 GCGCGATGAACGGG-1 
#>             "01"             "03"             "01"             "04"             "01" 
#> GCGCGATGGTGCAT-1 GCGGAGCTCCTGAA-1 GCGGCAACCCGATA-1 GCGGCAACGGAGGT-1 GCGGCAACTGTCGA-1 
#>             "03"             "01"             "01"             "04"            "021" 
#> GCGTAAACACGGTT-1 GCGTAATGCACCAA-1 GCGTATGAACACCA-1 GCGTATGATGAGAA-1 GCTACAGAAAGGTA-1 
#>           "0222"           "0221"             "01"           "0222"             "01" 
#> GCTACAGAATCTTC-1 GCTACCTGAGAAGT-1 GCTACCTGATCACG-1 GCTACGCTAGAATG-1 GCTACGCTAGCTAC-1 
#>             "04"            "021"             "01"             "01"             "01" 
#> GCTACGCTCCCTAC-1 GCTAGAACAGAGGC-1 GCTAGAACGGATCT-1 GCTAGAACTCCCGT-1 GCTAGATGAGCTCA-1 
#>             "01"             "04"             "01"             "01"            "021" 
#> GCTAGATGGCGATT-1 GCTATACTAAGGCG-1 GCTATACTAGCGTT-1 GCTATACTCTCTTA-1 GCTATACTGGACGA-1 
#>             "03"             "01"             "03"             "01"             "01" 
#> GCTCAAGAACCATG-1 GCTCAAGAAGTCAC-1 GCTCAGCTGTCTAG-1 GCTCCATGAGAAGT-1 GCTCCATGCCGAAT-1 
#>           "0222"           "0222"             "01"             "03"             "01" 
#> GCTCGACTCTAGTG-1 GCTGATGAGGTATC-1 GCTTAACTACAGTC-1 GCTTAACTACTGGT-1 GCTTAACTGCTGAT-1 
#>            "021"            "021"            "021"             "03"             "01" 
#> GCTTAACTTAGACC-1 GCTTAACTTCAGTG-1 GGAACACTCACTTT-1 GGAACACTTCAGAC-1 GGAACTACTACTTC-1 
#>            "021"             "01"            "021"             "03"             "01" 
#> GGAACTTGAAGGTA-1 GGAACTTGAGAATG-1 GGAACTTGCTCCAC-1 GGAACTTGGGTAGG-1 GGAAGGACATCGGT-1 
#>           "0222"             "01"            "021"             "04"            "021" 
#> GGAAGGACCACTAG-1 GGAAGGACGAGGGT-1 GGAAGGACGCGAAG-1 GGAAGGTGGCGAGA-1 GGAATCTGAAGGGC-1 
#>             "01"             "01"             "01"             "03"             "01" 
#> GGAATCTGAGGAGC-1 GGAATCTGCTTAGG-1 GGAATCTGCTTGTT-1 GGAATCTGGGAGGT-1 GGAATGCTTTCTAC-1 
#>             "01"             "04"            "021"             "01"             "01" 
#> GGACAGGAAAGGGC-1 GGACAGGAGTGCTA-1 GGACAGGATCTCGC-1 GGACCCGAAGCTAC-1 GGACCGTGCTTACT-1 
#>             "01"             "04"             "01"           "0222"            "021" 
#> GGACCGTGGGAACG-1 GGACCGTGTAACGC-1 GGACCTCTGTAAGA-1 GGACCTCTTTTCTG-1 GGACGAGAGTGTCA-1 
#>           "0222"             "01"            "021"             "03"            "021" 
#> GGACGCTGACGCAT-1 GGACGCTGCTAGCA-1 GGACGCTGTCCTCG-1 GGAGAGACGTGAGG-1 GGAGCAGATTCAGG-1 
#>             "01"             "01"             "03"             "01"             "04" 
#> GGAGCCACCTTCTA-1 GGAGCGCTACGCAT-1 GGAGCGCTCCGAAT-1 GGAGGATGCCACCT-1 GGAGGATGGTTGAC-1 
#>             "04"           "0222"             "01"             "01"            "021" 
#> GGAGGATGTCAGTG-1 GGAGGCCTCGTTGA-1 GGAGGCCTTTCTTG-1 GGAGGTGATACGCA-1 GGAGGTGATCGCTC-1 
#>            "021"             "03"             "01"             "01"             "01" 
#> GGATACTGCAGCTA-1 GGATACTGTCTAGG-1 GGATAGCTCGTCTC-1 GGATAGCTCTGAAC-1 GGATGTACCAAAGA-1 
#>             "01"             "01"             "01"             "01"             "04" 
#> GGATGTACGCGAAG-1 GGATGTACGTCTTT-1 GGATGTACGTGTCA-1 GGATTTCTAGGTTC-1 GGATTTCTTTGTCT-1 
#>             "01"            "021"             "03"             "01"           "0222" 
#> GGCAAGGAAAAAGC-1 GGCAAGGAAGAAGT-1 GGCAAGGACTTGGA-1 GGCAAGGAGGACTT-1 GGCAATACGCTAAC-1 
#>             "03"             "01"            "021"             "01"             "04" 
#> GGCAATACGGCATT-1 GGCAATACGTTTCT-1 GGCACGTGGCTTAG-1 GGCACTCTTTTGTC-1 GGCATATGCTTATC-1 
#>             "01"             "04"           "0221"             "01"             "03" 
#> GGCATATGGGGAGT-1 GGCATATGTGTGAC-1 GGCCACGACAGAGG-1 GGCCAGACTGGTTG-1 GGCCCAGAAAGTAG-1 
#>             "03"             "01"             "01"             "01"            "021" 
#> GGCCGAACAACGAA-1 GGCCGAACGCAGAG-1 GGCCGAACGTAGGG-1 GGCCGAACTCTAGG-1 GGCCGATGCAGGAG-1 
#>             "01"             "01"             "01"             "03"             "01" 
#> GGCCGATGCCGAAT-1 GGCCGATGTACTCT-1 GGCGACACTGCCCT-1 GGCGACTGCGTAAC-1 GGCGCATGCCTAAG-1 
#>             "01"             "01"             "03"             "01"           "0221" 
#> GGCGCATGCTCCAC-1 GGCGCATGTGGAAA-1 GGCGGACTAGAGGC-1 GGCGGACTAGGAGC-1 GGCGGACTCTGACA-1 
#>             "01"             "01"             "01"             "03"             "01" 
#> GGCGGACTCTTGGA-1 GGCGGACTTACTGG-1 GGCGGACTTGAACC-1 GGCTAAACACCTGA-1 GGCTAAACTCTTAC-1 
#>             "03"             "01"             "01"             "03"             "01" 
#> GGCTAATGAGCACT-1 GGCTAATGGTCTAG-1 GGCTCACTACTCAG-1 GGGAACGAAGCTCA-1 GGGAACGACACAAC-1 
#>             "03"             "01"            "021"           "0221"             "04" 
#> GGGAACGAGTGTCA-1 GGGAAGTGTTGAGC-1 GGGACCACACGTTG-1 GGGACCACAGAACA-1 GGGACCACGAATAG-1 
#>            "021"            "021"             "03"             "01"             "01" 
#> GGGACCACGTCATG-1 GGGACCACTCAAGC-1 GGGACCACTCGTGA-1 GGGACCACTGCATG-1 GGGACCTGACCCTC-1 
#>             "01"             "01"             "01"             "01"            "021" 
#> GGGACCTGCTTGCC-1 GGGACCTGTGGAGG-1 GGGATGGACGACAT-1 GGGATGGATACTTC-1 GGGATGGATGGTTG-1 
#>             "01"             "04"             "04"             "01"            "021" 
#> GGGATTACGTCTAG-1 GGGCAAGATGCATG-1 GGGCACACGGTGAG-1 GGGCACACGTTGCA-1 GGGCAGCTTGGGAG-1 
#>             "01"            "021"           "0221"             "01"             "01" 
#> GGGCAGCTTTTCTG-1 GGGCCAACCTTGGA-1 GGGCCAACGCGTTA-1 GGGCCAACTACGCA-1 GGGCCAACTCCAAG-1 
#>             "01"           "0222"             "04"            "021"             "04" 
#> GGGCCATGATGGTC-1 GGGCCATGTTGACG-1 GGGTAACTCAGCTA-1 GGGTAACTCTAGTG-1 GGGTAACTCTGGAT-1 
#>             "01"             "01"             "01"             "04"             "01" 
#> GGGTTAACGTGCAT-1 GGTAAAGAGCTAAC-1 GGTACAACTGCAAC-1 GGTACATGAAAGCA-1 GGTACATGAGCTCA-1 
#>             "03"             "03"             "01"             "04"             "01" 
#> GGTACATGCGGTAT-1 GGTACATGGTTACG-1 GGTACATGTGGGAG-1 GGTACTGAACTCTT-1 GGTAGTACACCACA-1 
#>             "01"             "01"             "01"            "021"             "01" 
#> GGTAGTACACTAGC-1 GGTAGTACCCTGTC-1 GGTAGTACGCCATA-1 GGTAGTACTGTCTT-1 GGTATCGAGACAAA-1 
#>            "021"             "01"            "021"             "01"            "021" 
#> GGTATCGATGAACC-1 GGTCAAACCAAAGA-1 GGTCTAGAGAAACA-1 GGTCTAGATAGCGT-1 GGTGATACCGACTA-1 
#>             "04"             "01"            "021"           "0222"             "04" 
#> GGTGATACGACTAC-1 GGTGATACTGTTTC-1 GGTGGAGAAACGGG-1 GGTGGAGAAGTAGA-1 GGTGGAGACAGATC-1 
#>            "021"             "01"             "03"             "01"             "03" 
#> GGTGGAGATCGATG-1 GGTGGAGATCTCTA-1 GGTGGAGATTACTC-1 GGTTTACTACGCAT-1 GTAACGTGACCTCC-1 
#>             "01"            "021"             "03"             "03"           "0222" 
#> GTAACGTGATCGGT-1 GTAACGTGCAGCTA-1 GTAACGTGGTTGAC-1 GTAAGCACAACGGG-1 GTAAGCACTCATTC-1 
#>             "04"             "04"             "04"             "01"             "04" 
#> GTAAGCTGGTACCA-1 GTAATAACCTTCTA-1 GTAATAACGTTGTG-1 GTACCCTGACAGTC-1 GTACCCTGGAGCTT-1 
#>            "021"            "021"             "01"           "0221"             "01" 
#> GTACCCTGTCCTTA-1 GTACCCTGTGAACC-1 GTACGTGAACGTTG-1 GTACTTTGTCGACA-1 GTAGACTGAGATGA-1 
#>             "03"             "01"             "03"             "01"            "021" 
#> GTAGACTGTATTCC-1 GTAGCAACAGTCGT-1 GTAGCAACCATTTC-1 GTAGCAACGGTAGG-1 GTAGCATGCACTCC-1 
#>             "01"            "021"             "04"            "021"             "04" 
#> GTAGCATGTAAGCC-1 GTAGCCCTGACGTT-1 GTAGCTGAAGCTAC-1 GTAGCTGAATTCGG-1 GTAGGTACACGGGA-1 
#>            "021"             "01"           "0221"             "01"            "021" 
#> GTAGTGACCTCATT-1 GTAGTGTGAGCGGA-1 GTAGTGTGAGGCGA-1 GTAGTGTGTGGTTG-1 GTATCACTGGTAGG-1 
#>             "01"             "03"            "021"             "01"            "021" 
#> GTATCTACAGAAGT-1 GTATCTACGACGAG-1 GTATCTACGTTACG-1 GTATTAGAAACAGA-1 GTATTAGAGGTCTA-1 
#>             "03"             "03"             "01"             "03"             "01" 
#> GTATTCACACAGCT-1 GTATTCACGGGTGA-1 GTCAACGACACTGA-1 GTCAACGAGTGTAC-1 GTCAATCTACACCA-1 
#>             "01"             "03"             "01"            "021"             "01" 
#> GTCAATCTGTAGCT-1 GTCAATCTTGTGGT-1 GTCACCTGCCTCCA-1 GTCACCTGTCCCGT-1 GTCATACTAATCGC-1 
#>             "03"             "01"             "01"             "01"             "04" 
#> GTCATACTGCGATT-1 GTCATACTTCGCCT-1 GTCATACTTTACCT-1 GTCATACTTTGACG-1 GTCCAAGAAAAACG-1 
#>             "03"             "03"             "03"             "01"             "01" 
#> GTCCACTGACCTCC-1 GTCCACTGGGTACT-1 GTCCAGCTACGGGA-1 GTCCCATGTGGTGT-1 GTCGAATGAAGGCG-1 
#>             "01"           "0221"             "01"           "0222"           "0222" 
#> GTCGACCTGAATGA-1 GTCGACCTGTTCAG-1 GTCGCACTTGAGAA-1 GTCTAACTGGTCTA-1 GTCTAGGAGCTTCC-1 
#>             "03"             "01"             "04"           "0221"            "021" 
#> GTGAACACACTCTT-1 GTGAACACTCAGGT-1 GTGACCCTTAAGCC-1 GTGATGACAAGTGA-1 GTGATGACCTGAGT-1 
#>             "01"             "01"             "01"             "01"             "04" 
#> GTGATGACGGTTTG-1 GTGATTCTCATTTC-1 GTGATTCTCTCTCG-1 GTGATTCTGGTTCA-1 GTGATTCTGTCGAT-1 
#>             "01"             "01"            "021"             "03"             "01" 
#> GTGATTCTTAGCGT-1 GTGCCACTCAGGAG-1 GTGGATTGCACTAG-1 GTGGATTGCGGAGA-1 GTGGATTGTAACGC-1 
#>             "04"             "01"           "0221"             "01"             "01" 
#> GTGTACGATCAGTG-1 GTGTAGTGGGTACT-1 GTGTATCTAGCCTA-1 GTGTATCTAGTAGA-1 GTGTATCTGTTACG-1 
#>             "01"             "01"             "04"             "03"             "04" 
#> GTGTCAGAAGCGTT-1 GTTAAAACCGAGAG-1 GTTAAATGCTCGAA-1 GTTAAATGTCGACA-1 GTTAACCTAGCTAC-1 
#>             "03"             "03"             "01"             "04"             "01" 
#> GTTAACCTTGCTTT-1 GTTAGGTGCACTCC-1 GTTAGGTGCCAGTA-1 GTTAGGTGCCCAAA-1 GTTAGGTGGAACTC-1 
#>           "0222"             "01"           "0222"           "0221"             "04" 
#> GTTAGTCTAAGAAC-1 GTTATAGAGGACAG-1 GTTATGCTTTCATC-1 GTTCAACTGGGACA-1 GTTCAACTTATGCG-1 
#>             "01"             "01"             "01"             "03"             "01" 
#> GTTGACGAGCCCTT-1 GTTGACGATATCGG-1 GTTGAGTGGTCTTT-1 GTTGAGTGTGCTTT-1 GTTGATCTGGGACA-1 
#>             "03"             "03"           "0222"             "01"             "01" 
#> GTTGATCTTTTCAC-1 GTTGGATGTTTACC-1 GTTGTACTATTCCT-1 GTTGTACTTTTGGG-1 GTTTAAGACCATGA-1 
#>             "03"           "0221"           "0222"             "01"            "021" 
#> GTTTAAGACTGTCC-1 TAAACAACCAACCA-1 TAAACAACGAATCC-1 TAAAGACTCAGGAG-1 TAAATCGATGAGGG-1 
#>             "03"             "01"             "04"             "01"             "01" 
#> TAACAATGTGCCCT-1 TAACACCTTCGCTC-1 TAACACCTTCGTAG-1 TAACACCTTGTTTC-1 TAACATGACACTAG-1 
#>             "04"            "021"           "0222"             "03"             "04" 
#> TAACCGGACTTACT-1 TAACGTCTCAACCA-1 TAACGTCTCATTGG-1 TAACTAGAATTTCC-1 TAACTAGACTTAGG-1 
#>             "01"            "021"             "01"             "01"             "01" 
#> TAACTAGATCTGGA-1 TAACTCACGAGGAC-1 TAACTCACGTACAC-1 TAACTCACGTATCG-1 TAACTCACTCTACT-1 
#>             "01"            "021"             "04"            "021"             "03" 
#> TAAGAACTGTGTCA-1 TAAGAGGACTAAGC-1 TAAGAGGACTTGTT-1 TAAGATACGGTTCA-1 TAAGATTGCGTAGT-1 
#>            "021"             "04"             "03"            "021"             "01" 
#> TAAGATTGTTGCTT-1 TAAGCGTGAGGTTC-1 TAAGCGTGGACAAA-1 TAAGCGTGGGAAAT-1 TAAGCGTGTGCTCC-1 
#>             "01"            "021"           "0222"             "01"           "0221" 
#> TAAGGCTGCCATGA-1 TAAGGCTGCTGCTC-1 TAAGGCTGTCTCGC-1 TAAGGGCTGCTGTA-1 TAAGGGCTTTACTC-1 
#>             "01"             "01"           "0222"             "03"             "01" 
#> TAAGTAACCGAGAG-1 TAAGTAACCTCCAC-1 TAAGTAACCTGTAG-1 TAAGTAACTTGTCT-1 TAATGATGAGCGGA-1 
#>             "04"             "04"             "01"             "01"             "01" 
#> TAATGCCTCATGAC-1 TAATGCCTCGTCTC-1 TAATGTGAAGATGA-1 TAATGTGACTGCAA-1 TAATGTGATTACTC-1 
#>             "01"             "03"             "01"           "0222"             "01" 
#> TACAAATGGGTACT-1 TACAATGAAAACAG-1 TACAATGACTTAGG-1 TACAATGATGCTAG-1 TACACACTCACACA-1 
#>             "01"            "021"             "01"             "01"             "01" 
#> TACACACTCTTACT-1 TACATAGAACGCAT-1 TACATCACACGGGA-1 TACATCACCTGTTT-1 TACATCACGCTAAC-1 
#>             "01"             "01"             "01"           "0221"             "04" 
#> TACATCACTGAACC-1 TACCATTGAGGTTC-1 TACCATTGCGGGAA-1 TACCATTGGGGATG-1 TACCATTGTGAGGG-1 
#>           "0221"             "01"            "021"            "021"            "021" 
#> TACCGGCTGTTGGT-1 TACGAGTGATCTCT-1 TACGAGTGATGCTG-1 TACGAGTGCGGAGA-1 TACGAGTGGTTGGT-1 
#>             "01"             "01"           "0222"             "01"             "01" 
#> TACGATCTAGTGTC-1 TACGATCTCACTGA-1 TACGATCTTACGAC-1 TACGCAGAGAATCC-1 TACGCCACATTCCT-1 
#>             "01"           "0222"             "03"             "03"             "01" 
#> TACGCCACTCCCAC-1 TACGCCACTCCGAA-1 TACGGAACGCGTTA-1 TACGGCCTGGGACA-1 TACGTACTACGGAG-1 
#>           "0221"             "04"             "04"             "03"             "01" 
#> TACGTACTCAGTTG-1 TACGTACTCCCGTT-1 TACGTTACAGAAGT-1 TACGTTACCAAGCT-1 TACTAAGAAAGGTA-1 
#>             "01"             "04"             "01"            "021"             "04" 
#> TACTAAGAATCACG-1 TACTAAGATGATGC-1 TACTAAGATTGCGA-1 TACTACACGAGAGC-1 TACTACACTTACCT-1 
#>             "01"            "021"             "01"             "01"             "04" 
#> TACTACTGAACCTG-1 TACTACTGATGTCG-1 TACTACTGATTCTC-1 TACTACTGTATGGC-1 TACTCAACGGTCTA-1 
#>            "021"             "03"             "01"             "01"            "021" 
#> TACTCAACTGCTAG-1 TACTCCCTCAGTTG-1 TACTCTGAATCGAC-1 TACTCTGACGAGTT-1 TACTCTGATTGACG-1 
#>             "04"             "01"             "03"             "01"             "04" 
#> TACTGGGATCGATG-1 TACTGTTGAAAGCA-1 TACTGTTGAGGCGA-1 TACTGTTGCTGAAC-1 TACTTGACTCCTCG-1 
#>             "01"             "01"             "03"             "04"             "03" 
#> TACTTGACTGGTGT-1 TACTTTCTTTTGGG-1 TAGAAACTAATCGC-1 TAGAAACTGCTTCC-1 TAGAAACTGGGATG-1 
#>             "04"             "01"             "01"            "021"             "03" 
#> TAGAATTGCGACAT-1 TAGAATTGTATCGG-1 TAGACGTGCTTGAG-1 TAGACGTGTCGCTC-1 TAGAGCACCTTACT-1 
#>             "01"             "01"             "01"             "01"             "04" 
#> TAGATTGACTTGTT-1 TAGATTGAGGCATT-1 TAGCATCTCAGCTA-1 TAGCATCTCCCTCA-1 TAGCATCTGCTGTA-1 
#>             "04"             "01"             "03"             "01"           "0221" 
#> TAGCATCTGGGACA-1 TAGCATCTTGTCGA-1 TAGCCCACAAAAGC-1 TAGCCCACAGCCAT-1 TAGCCCACAGCTAC-1 
#>             "01"             "01"             "01"             "03"             "03" 
#> TAGCCCACCCACAA-1 TAGCCCTGCGGAGA-1 TAGCCGCTTACGAC-1 TAGCCGCTTACTTC-1 TAGCCGCTTTCCAT-1 
#>             "01"             "01"             "01"             "03"           "0222" 
#> TAGCTACTGAATAG-1 TAGCTACTGTAGCT-1 TAGCTACTTTTGCT-1 TAGGACTGTGCTGA-1 TAGGAGCTAAGGCG-1 
#>             "04"             "01"             "01"             "01"             "04" 
#> TAGGAGCTGAGGGT-1 TAGGAGCTTGCATG-1 TAGGCAACCGTCTC-1 TAGGCATGCTCTCG-1 TAGGCATGGCGAGA-1 
#>             "01"             "04"             "04"             "03"             "03" 
#> TAGGCTGATGCCTC-1 TAGGGACTGAACTC-1 TAGGTCGACACTGA-1 TAGGTCGAGGATCT-1 TAGGTGACACACTG-1 
#>            "021"             "03"             "01"             "04"             "01" 
#> TAGGTGACACGTTG-1 TAGGTGTGTTCTGT-1 TAGGTTCTGAAGGC-1 TAGGTTCTTCTTAC-1 TAGGTTCTTGCTGA-1 
#>             "04"             "03"             "01"           "0221"            "021" 
#> TAGTAAACCTCGCT-1 TAGTAAACGTCACA-1 TAGTAATGAGATCC-1 TAGTACCTAAGAAC-1 TAGTATGATCTTAC-1 
#>             "01"             "01"             "01"            "021"             "04" 
#> TAGTATGATTCTCA-1 TAGTCTTGGCTGTA-1 TAGTCTTGGGACTT-1 TAGTCTTGTGGAAA-1 TAGTGGTGAAGTGA-1 
#>             "01"             "01"             "01"             "03"             "03" 
#> TAGTTAGAACCACA-1 TAGTTAGATGAACC-1 TATAAGACAACAGA-1 TATAAGACAGCTCA-1 TATAAGTGACACCA-1 
#>             "03"             "01"             "01"           "0221"           "0221" 
#> TATAAGTGTATCGG-1 TATAAGTGTGGTGT-1 TATACAGAACCCTC-1 TATACAGAAGAACA-1 TATACAGATCCAGA-1 
#>            "021"           "0221"             "01"             "01"             "01" 
#> TATACCACCTGATG-1 TATACGCTACCAAC-1 TATAGATGGACGGA-1 TATAGATGTTCCGC-1 TATCCAACCAGCTA-1 
#>             "04"             "01"             "01"           "0221"            "021" 
#> TATCCAACTCTCTA-1 TATCGACTACTAGC-1 TATCGACTCGATAC-1 TATCGTACAGATGA-1 TATCGTACATTCCT-1 
#>             "03"             "01"           "0221"             "01"            "021" 
#> TATCTCGAGAGATA-1 TATCTGACAGGTTC-1 TATCTGACTGTTTC-1 TATCTTCTAAACAG-1 TATGAATGGAGGAC-1 
#>             "01"             "03"             "01"             "01"             "03" 
#> TATGAATGTTTGCT-1 TATGCGGATAACCG-1 TATGGGTGCATCAG-1 TATGGGTGCTAGCA-1 TATGGTCTCTACCC-1 
#>           "0221"             "01"             "03"             "04"             "01" 
#> TATGTCACGGAACG-1 TATGTCACTAACCG-1 TATGTCACTTCTCA-1 TATGTGCTCCGATA-1 TATGTGCTGGATTC-1 
#>             "04"           "0222"             "04"            "021"             "01" 
#> TATTGCTGAAGAAC-1 TATTGCTGCCGTTC-1 TATTGCTGTCTGGA-1 TATTGCTGTGCACA-1 TATTTCCTATTGGC-1 
#>            "021"             "04"             "01"             "01"            "021" 
#> TATTTCCTGGAGGT-1 TATTTCCTGGTGTT-1 TCAACACTGTTTGG-1 TCAAGGACAGCGTT-1 TCAAGGACATTCTC-1 
#>             "03"             "01"             "03"             "01"             "03" 
#> TCAAGGACGGTGTT-1 TCAATCACACTCTT-1 TCAATCACAGTCGT-1 TCACAACTATGTGC-1 TCACAACTTTGCTT-1 
#>            "021"             "03"           "0221"             "01"            "021" 
#> TCACATACACTTTC-1 TCACATACAGGGTG-1 TCACCCGAGACGGA-1 TCACCGTGCTCGCT-1 TCACCTCTACGACT-1 
#>             "01"             "01"           "0222"           "0221"             "03" 
#> TCACCTCTTCCAAG-1 TCACGAGAGGAGGT-1 TCACTATGGGGCAA-1 TCACTATGGTTGTG-1 TCAGACGACGCTAA-1 
#>           "0221"             "04"             "03"             "04"             "01" 
#> TCAGACGACGTTAG-1 TCAGAGACTCCAGA-1 TCAGCAGACTCCAC-1 TCAGCGCTCTAGTG-1 TCAGCGCTGGATCT-1 
#>             "03"             "01"             "01"             "01"             "04" 
#> TCAGCGCTGGTATC-1 TCAGGATGAAGTAG-1 TCAGGATGCCTTTA-1 TCAGTGGAAGATCC-1 TCAGTTACCTACGA-1 
#>             "01"             "01"           "0221"             "03"            "021" 
#> TCAGTTACTAGAAG-1 TCATCAACCCGATA-1 TCATCAACTGTTCT-1 TCATCATGCAGTTG-1 TCATCCCTTACTGG-1 
#>             "01"             "01"           "0222"             "01"             "01" 
#> TCATTCGATACAGC-1 TCCACGTGGAAACA-1 TCCACTCTACACTG-1 TCCACTCTGAGCTT-1 TCCACTCTTACTTC-1 
#>           "0221"             "01"             "01"            "021"             "04" 
#> TCCATAACAAAGTG-1 TCCATAACCGTAGT-1 TCCATAACGATGAA-1 TCCATAACTACGCA-1 TCCATCCTCCCTAC-1 
#>             "01"             "04"             "01"             "01"             "03" 
#> TCCCACGATCATTC-1 TCCCATCTCAAAGA-1 TCCCGAACACAGTC-1 TCCCGAACTTCGCC-1 TCCCGATGAGATCC-1 
#>             "01"            "021"             "03"           "0221"             "01" 
#> TCCCGATGCCTGAA-1 TCCCTACTCAACTG-1 TCCGAAGACAATCG-1 TCCGAAGACGTTAG-1 TCCGGACTGAGGTG-1 
#>            "021"             "04"            "021"             "01"             "01" 
#> TCCGGACTGTACGT-1 TCCTAAACATCGAC-1 TCCTAAACCGAGAG-1 TCCTAAACCGCATA-1 TCCTAATGGTTTGG-1 
#>             "01"             "01"             "01"             "03"             "03" 
#> TCCTACCTGTCGTA-1 TCCTATGAAAAGCA-1 TCGAATCTCTGGTA-1 TCGACCTGCCGATA-1 TCGACGCTTCTATC-1 
#>             "01"             "03"             "03"           "0221"            "021" 
#> TCGACGCTTTGACG-1 TCGAGAACGACAGG-1 TCGAGAACGTTAGC-1 TCGAGCCTATCAGC-1 TCGAGCCTGCGAGA-1 
#>             "01"             "01"             "03"             "04"             "01" 
#> TCGAGCCTTGTGAC-1 TCGATACTATTCCT-1 TCGATACTTGCACA-1 TCGATTTGATGCCA-1 TCGATTTGCACTCC-1 
#>             "01"             "01"             "01"            "021"             "01" 
#> TCGATTTGCAGCTA-1 TCGATTTGCCTACC-1 TCGATTTGTCGTGA-1 TCGCAGCTAGATCC-1 TCGCCATGAGACTC-1 
#>             "03"            "021"             "04"             "01"             "01" 
#> TCGCCATGTGGTCA-1 TCGGACCTAACAGA-1 TCGGACCTATAAGG-1 TCGGACCTGTACAC-1 TCGGTAGAGTAGGG-1 
#>             "04"             "01"             "04"             "01"             "01" 
#> TCGGTAGATCCCAC-1 TCGTAGGATCGACA-1 TCGTTATGGACAAA-1 TCTAACACCAGTTG-1 TCTAACACGAGCAG-1 
#>             "04"             "01"             "01"             "03"           "0222" 
#> TCTAACTGAACCAC-1 TCTAAGCTAATGCC-1 TCTAAGCTTAGTCG-1 TCTAAGCTTCTAGG-1 TCTAAGCTTGTTCT-1 
#>             "01"             "01"             "03"           "0221"            "021" 
#> TCTAAGCTTTCGCC-1 TCTACAACGACTAC-1 TCTAGACTTAGAAG-1 TCTAGTTGCACCAA-1 TCTATGTGAAGAGT-1 
#>             "04"           "0222"            "021"           "0222"            "021" 
#> TCTATGTGAGTCTG-1 TCTCAAACCTAAGC-1 TCTCTAGAATTTCC-1 TCTGATACACGTGT-1 TCTGATACTCGCCT-1 
#>             "01"             "04"             "01"             "01"             "01" 
#> TCTTACGAACCTGA-1 TCTTCAGAGCTACA-1 TCTTGATGCGGAGA-1 TGAAATTGGTGAGG-1 TGAACCGAAAACGA-1 
#>            "021"           "0222"             "01"            "021"             "01" 
#> TGAACCGACTACTT-1 TGAACCGATTCGGA-1 TGAAGCACTCACGA-1 TGAAGCTGAACGAA-1 TGAAGCTGCATGGT-1 
#>           "0221"           "0221"             "01"             "01"             "04" 
#> TGAAGCTGCGTAAC-1 TGAATAACCACTTT-1 TGAATAACTCCCAC-1 TGACACGACCTTAT-1 TGACCAGACAACCA-1 
#>             "01"             "01"             "03"             "04"             "01" 
#> TGACCAGAGGATTC-1 TGACCGCTAAAAGC-1 TGACCGCTCTGCAA-1 TGACGATGCAAAGA-1 TGACGCCTGTACCA-1 
#>             "01"             "01"             "01"            "021"             "01" 
#> TGACGCCTTTACTC-1 TGACTGGAAGAGAT-1 TGACTGGACCGTAA-1 TGACTGGACGCAAT-1 TGACTGGAGGACAG-1 
#>             "03"            "021"             "01"             "01"             "04" 
#> TGACTGGATTCTCA-1 TGACTTACACACCA-1 TGACTTACAGTCTG-1 TGACTTTGCGCATA-1 TGACTTTGTTTGTC-1 
#>             "01"             "01"           "0222"             "01"             "01" 
#> TGAGACACAAGGTA-1 TGAGACACTCAAGC-1 TGAGCTGAATGCTG-1 TGAGCTGACTGGAT-1 TGAGCTGATGCTAG-1 
#>             "01"             "01"           "0221"            "021"            "021" 
#> TGAGGACTCTCATT-1 TGAGGACTTCATTC-1 TGAGGTACGAACCT-1 TGAGTCGAGTTACG-1 TGAGTGACTGAGCT-1 
#>            "021"             "01"           "0221"             "04"             "01" 
#> TGATAAACGAATCC-1 TGATAAACTCCGTC-1 TGATAAACTTTCAC-1 TGATACCTCACTAG-1 TGATACCTGTTGGT-1 
#>             "01"             "03"             "01"            "021"             "01" 
#> TGATACCTTATGCG-1 TGATACCTTGAAGA-1 TGATATGAACCTTT-1 TGATCACTAGCATC-1 TGATCACTCTCGCT-1 
#>             "01"             "01"             "01"             "03"             "01" 
#> TGATCACTTCTACT-1 TGATCGGACTGACA-1 TGATCGGAGGAGCA-1 TGATCGGATATGCG-1 TGATTAGACATTGG-1 
#>             "04"           "0221"             "04"           "0221"             "01" 
#> TGATTAGATGACTG-1 TGATTAGATGCTAG-1 TGATTCACTATGCG-1 TGATTCACTGTCAG-1 TGATTCTGCCGAAT-1 
#>             "04"             "01"             "01"             "04"             "01" 
#> TGATTCTGCTCTTA-1 TGCAAGTGAGAACA-1 TGCAAGTGGGTAGG-1 TGCAATCTTCAGGT-1 TGCACAGACGACAT-1 
#>             "01"             "01"            "021"           "0222"             "03" 
#> TGCCAAGAGCAGTT-1 TGCCAAGATCTCTA-1 TGCCACTGAACGTC-1 TGCCACTGCGATAC-1 TGCCAGCTTGGCAT-1 
#>            "021"             "01"             "01"             "03"             "01" 
#> TGCCCAACAGCAAA-1 TGCCCAACCGCATA-1 TGCCGACTCTCCCA-1 TGCGAAACAGTCAC-1 TGCGAAACGTTGCA-1 
#>             "01"           "0221"             "04"             "04"             "04" 
#> TGCGATGAACGGTT-1 TGCGATGACCTCGT-1 TGCGATGACTAGTG-1 TGCGATGACTGCTC-1 TGCGATGACTTGCC-1 
#>             "01"             "01"             "04"             "04"             "04" 
#> TGCGATGAGTGCTA-1 TGCGCACTCTTGAG-1 TGCGTAGAATAAGG-1 TGCGTAGACGGGAA-1 TGCGTAGATGGTCA-1 
#>            "021"            "021"            "021"             "04"           "0221" 
#> TGCTAGGAAACCGT-1 TGCTAGGATAGTCG-1 TGCTATACGGTTCA-1 TGCTATACTGCTGA-1 TGCTGAGAGAGCAG-1 
#>             "03"             "01"            "021"             "03"             "03" 
#> TGCTGAGATTATCC-1 TGGAAAGACTCTCG-1 TGGAAAGAGCGATT-1 TGGAAAGAGGTCAT-1 TGGAAAGATATGGC-1 
#>             "01"             "04"             "01"           "0221"             "01" 
#> TGGAACACAAACAG-1 TGGAACACGCTAAC-1 TGGAAGCTCAGATC-1 TGGACCCTACACTG-1 TGGACCCTCATGGT-1 
#>             "03"             "01"             "01"            "021"             "01" 
#> TGGACCCTGGTACT-1 TGGACTGAGTATGC-1 TGGAGACTATCAGC-1 TGGAGACTTCAAGC-1 TGGAGACTTGACCA-1 
#>           "0222"             "01"            "021"             "01"             "03" 
#> TGGAGGGACGGAGA-1 TGGAGGGAGCTATG-1 TGGATCGATAAAGG-1 TGGATGTGACCTAG-1 TGGATGTGTGAAGA-1 
#>            "021"             "01"             "01"             "04"             "04" 
#> TGGATTCTCATACG-1 TGGCAATGCTTGTT-1 TGGCACCTTCACGA-1 TGGCACCTTCAGTG-1 TGGGTATGAAGAGT-1 
#>             "01"             "04"             "01"           "0222"             "01" 
#> TGGGTATGCACAAC-1 TGGGTATGGTACGT-1 TGGGTATGTTTGGG-1 TGGTAGACATGCCA-1 TGGTAGACCCTCAC-1 
#>             "01"             "04"            "021"             "01"             "03" 
#> TGGTAGACCTGATG-1 TGGTAGTGCACTGA-1 TGGTATCTAAACAG-1 TGGTATCTCTTCCG-1 TGGTCAGACCCAAA-1 
#>             "01"            "021"             "01"             "01"             "01" 
#> TGGTTACTGACGTT-1 TGGTTACTGTTCTT-1 TGTAACCTAGAGGC-1 TGTAACCTTGCCTC-1 TGTAATGACACAAC-1 
#>            "021"             "01"             "01"           "0222"             "03" 
#> TGTAATGAGGTAAA-1 TGTACTTGCTCTAT-1 TGTAGGTGCGAGAG-1 TGTAGGTGCTATGG-1 TGTAGGTGCTCTAT-1 
#>             "03"           "0221"             "04"             "01"           "0222" 
#> TGTAGGTGTGCTGA-1 TGTAGTCTTCCAGA-1 TGTAGTCTTGCACA-1 TGTATCTGTTAGGC-1 TGTATGCTCATGGT-1 
#>             "01"             "01"             "03"             "01"             "04" 
#> TGTATGCTGTAGGG-1 TGTATGCTTTCATC-1 TGTCAGGAATACCG-1 TGTCAGGAGATGAA-1 TGTCTAACCCCTTG-1 
#>             "01"             "01"             "01"           "0221"             "01" 
#> TGTGACGATTCTCA-1 TGTGAGACTGTCAG-1 TGTGAGACTTGAGC-1 TGTGAGTGACCACA-1 TGTGAGTGAGTGCT-1 
#>             "03"           "0221"             "01"             "01"           "0221" 
#> TGTGAGTGGAGATA-1 TGTGATCTCTCTAT-1 TGTGATCTGACACT-1 TGTGGATGGCCAAT-1 TGTTAAGACAAAGA-1 
#>             "03"             "04"             "01"             "04"            "021" 
#> TGTTAAGATAAGGA-1 TGTTACACCGCATA-1 TGTTACACGACTAC-1 TGTTACTGGCTACA-1 TGTTACTGTAGTCG-1 
#>            "021"           "0221"            "021"             "03"             "03" 
#> TTAACCACCGTAAC-1 TTAACCACTAAGGA-1 TTAACCACTCAGAC-1 TTACACACGTGTTG-1 TTACACACTCCTAT-1 
#>             "01"             "03"             "01"             "01"             "01" 
#> TTACCATGAATCGC-1 TTACCATGGTTGAC-1 TTACCATGTGTCTT-1 TTACCATGTTGTGG-1 TTACGACTGAGAGC-1 
#>            "021"             "01"             "03"             "04"             "01" 
#> TTACGACTTGACAC-1 TTACGTACGTTCAG-1 TTACTCGAAGAATG-1 TTACTCGACGCAAT-1 TTACTCGAGGGTGA-1 
#>            "021"             "03"            "021"           "0222"             "01" 
#> TTACTCGATCTACT-1 TTAGAATGTGGTGT-1 TTAGAATGTGTAGC-1 TTAGACCTCCTACC-1 TTAGACCTCCTTTA-1 
#>             "03"             "01"             "01"             "01"            "021" 
#> TTAGCTACAACCGT-1 TTAGCTACTGTCCC-1 TTAGCTACTTTCGT-1 TTAGGGACGCGAAG-1 TTAGGGTGCTGGAT-1 
#>             "01"           "0222"             "01"             "01"             "04" 
#> TTAGGGTGTCCTGC-1 TTAGGTCTACTTTC-1 TTAGTCACCAGTTG-1 TTAGTCTGAAAGCA-1 TTAGTCTGCCAACA-1 
#>           "0222"            "021"             "01"             "04"             "03" 
#> TTAGTCTGTGCACA-1 TTATCCGACTAGTG-1 TTATCCGAGAAAGT-1 TTATGAGAGATAAG-1 TTATGCACGTCACA-1 
#>             "01"             "04"           "0222"             "01"             "04" 
#> TTATGGCTTATGGC-1 TTATTCCTATGCTG-1 TTATTCCTGGACAG-1 TTATTCCTGGTACT-1 TTATTCCTTCGTGA-1 
#>           "0222"           "0222"             "04"             "04"             "01" 
#> TTCAAAGATAAAGG-1 TTCAACACAACAGA-1 TTCAACACCCCAAA-1 TTCAACACGGACGA-1 TTCAAGCTAAGAAC-1 
#>             "01"             "01"            "021"           "0221"            "021" 
#> TTCAAGCTAGATGA-1 TTCAAGCTGTTGAC-1 TTCAAGCTTGATGC-1 TTCAAGCTTTCGCC-1 TTCACAACCCGTTC-1 
#>             "01"             "01"             "01"             "01"           "0222" 
#> TTCACAACGTCTGA-1 TTCAGACTACCCAA-1 TTCAGACTCTCGAA-1 TTCAGTACCGACTA-1 TTCAGTACTCAAGC-1 
#>            "021"             "01"             "01"             "01"             "01" 
#> TTCAGTACTCCTAT-1 TTCAGTTGCCAAGT-1 TTCAGTTGTCCTTA-1 TTCAGTTGTCTAGG-1 TTCAGTTGTCTCGC-1 
#>            "021"             "01"            "021"             "01"             "04" 
#> TTCATCGAGGTGGA-1 TTCATGTGTGGTGT-1 TTCATTCTATGTCG-1 TTCATTCTTCTCTA-1 TTCCAAACCTATGG-1 
#>            "021"             "01"            "021"             "01"            "021" 
#> TTCCAAACCTCCCA-1 TTCCAAACTCCCAC-1 TTCCAAACTTGACG-1 TTCCATGACGAGAG-1 TTCCATGACTGTCC-1 
#>             "04"             "03"             "03"            "021"             "01" 
#> TTCCCACTTGAGGG-1 TTCCCACTTGTCTT-1 TTCCTAGAAAGTGA-1 TTCCTAGACTAGTG-1 TTCGAGGACTCTAT-1 
#>             "03"            "021"             "01"           "0221"             "01" 
#> TTCGAGGAGGGCAA-1 TTCGAGGATAGAAG-1 TTCGATTGAGCATC-1 TTCGGAGAATGCCA-1 TTCGGAGATGTGCA-1 
#>             "01"           "0221"             "01"            "021"             "01" 
#> TTCGTATGAAAAGC-1 TTCGTATGGATAGA-1 TTCGTATGGTCTGA-1 TTCGTATGTCCTTA-1 TTCTACGAACGTAC-1 
#>             "03"             "03"             "01"           "0222"             "01" 
#> TTCTACGAGTTGGT-1 TTCTAGTGACACGT-1 TTCTAGTGCATGAC-1 TTCTAGTGGAGAGC-1 TTCTAGTGGTCACA-1 
#>             "01"             "01"            "021"             "03"           "0222" 
#> TTCTCAGAAGAGAT-1 TTCTCAGAAGCATC-1 TTCTCAGATGGAGG-1 TTCTGATGGAGACG-1 TTCTTACTCTGGAT-1 
#>             "01"             "04"             "01"             "03"           "0221" 
#> TTGAACCTCCTTGC-1 TTGAATGAACTACG-1 TTGAATGACTTACT-1 TTGAATGATCTCAT-1 TTGACACTCTGTAG-1 
#>             "04"           "0221"             "01"             "04"             "01" 
#> TTGACACTGATAAG-1 TTGAGGACAGAACA-1 TTGAGGACTACGCA-1 TTGAGGTGGACGGA-1 TTGCATTGAGCTAC-1 
#>             "04"            "021"           "0222"             "01"             "01" 
#> TTGCATTGCTAAGC-1 TTGCATTGTGACTG-1 TTGCTAACACCAAC-1 TTGCTAACACGCTA-1 TTGCTAACCACTCC-1 
#>            "021"             "01"             "01"           "0221"             "01" 
#> TTGCTATGGTACGT-1 TTGCTATGGTAGGG-1 TTGGAGACCAATCG-1 TTGGAGACGCTATG-1 TTGGAGACTATGGC-1 
#>           "0222"           "0221"             "01"            "021"             "04" 
#> TTGGGAACTGAACC-1 TTGGTACTACTGGT-1 TTGGTACTCTTAGG-1 TTGGTACTGAATCC-1 TTGGTACTGGATTC-1 
#>             "01"           "0222"             "01"             "04"             "04" 
#> TTGTACACGTTGTG-1 TTGTACACTTGCAG-1 TTGTAGCTAGCTCA-1 TTGTAGCTCTCTTA-1 TTGTCATGGACGGA-1 
#>             "04"             "01"             "01"             "04"             "03" 
#> TTTAGAGATCCTCG-1 TTTAGCTGATACCG-1 TTTAGCTGGATACC-1 TTTAGCTGTACTCT-1 TTTAGGCTCCTTTA-1 
#>             "04"             "01"            "021"            "021"            "021" 
#> TTTATCCTGTTGTG-1 TTTCACGAGGTTCA-1 TTTCAGTGGAAGGC-1 TTTCAGTGTCACGA-1 TTTCAGTGTCTATC-1 
#>           "0222"             "01"             "01"             "04"            "021" 
#> TTTCAGTGTGCAGT-1 TTTCCAGAGGTGAG-1 TTTCGAACACCTGA-1 TTTCGAACTCTCAT-1 TTTCTACTGAGGCA-1 
#>             "04"             "01"             "04"            "021"             "04" 
#> TTTCTACTTCCTCG-1 TTTGCATGAGAGGC-1 TTTGCATGCCTCAC-1 
#>             "04"             "04"             "01"

show/hide code output

get_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 227))
#> AAACATACAACCAC-1 AAACATTGAGCTAC-1 AAACATTGATCAGC-1 AAACCGTGCTTCCG-1 AAACCGTGTATGCG-1 
#>             "01"             "04"             "01"            "022"             "03" 
#> AAACGCACTGGTAC-1 AAACGCTGACCAGT-1 AAACGCTGGTTCTT-1 AAACGCTGTAGCCA-1 AAACGCTGTTTCTG-1 
#>             "01"             "01"             "01"             "03"            "021" 
#> AAACTTGAAAAACG-1 AAACTTGATCCAGA-1 AAAGAGACGAGATA-1 AAAGAGACGCGAGA-1 AAAGAGACGGACTT-1 
#>             "04"             "01"             "01"            "021"             "01" 
#> AAAGAGACGGCATT-1 AAAGCAGATATCGG-1 AAAGCCTGTATGCG-1 AAAGGCCTGTCTAG-1 AAAGTTTGATCACG-1 
#>             "01"            "022"             "01"             "04"             "04" 
#> AAAGTTTGGGGTGA-1 AAAGTTTGTAGAGA-1 AAAGTTTGTAGCGT-1 AAATCAACAATGCC-1 AAATCAACACCAGT-1 
#>             "04"             "01"            "021"             "04"             "01" 
#> AAATCAACCAGGAG-1 AAATCAACCCTATT-1 AAATCAACGGAAGC-1 AAATCAACTCGCAA-1 AAATCATGACCACA-1 
#>             "01"            "022"             "01"             "01"            "022" 
#> AAATCCCTCCACAA-1 AAATCCCTGCTATG-1 AAATGTTGAACGAA-1 AAATGTTGCCACAA-1 AAATGTTGTGGCAT-1 
#>             "01"             "04"            "021"             "03"            "022" 
#> AAATTCGAAGGTTC-1 AAATTCGAATCACG-1 AAATTCGAGCTGAT-1 AAATTCGAGGAGTG-1 AAATTCGATTCTCA-1 
#>             "01"            "021"            "022"             "01"             "03" 
#> AAATTGACACGACT-1 AAATTGACTCGCTC-1 AACAAACTCATTTC-1 AACAAACTTTCGTT-1 AACAATACGACGAG-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> AACACGTGCAGAGG-1 AACACGTGGAAAGT-1 AACACGTGGAACCT-1 AACACGTGGCTACA-1 AACACGTGTACGAC-1 
#>             "01"             "01"            "021"             "01"            "022" 
#> AACAGCACAAGAGT-1 AACATTGATGGGAG-1 AACCAGTGATACCG-1 AACCCAGATCGCTC-1 AACCGATGCTCCCA-1 
#>            "021"            "022"            "022"             "01"             "01" 
#> AACCGATGGTCATG-1 AACCGATGTTCTAC-1 AACCGCCTAGCGTT-1 AACCGCCTCTACGA-1 AACCTACTGTGAGG-1 
#>             "04"            "021"             "01"            "022"            "022" 
#> AACCTACTGTGTTG-1 AACCTTACGAGACG-1 AACCTTACGCGAGA-1 AACCTTACTAACGC-1 AACCTTTGGACGGA-1 
#>             "01"             "01"             "03"            "022"             "01" 
#> AACCTTTGTACGCA-1 AACGCAACAAGTAG-1 AACGCATGACCCAA-1 AACGCATGCCTTCG-1 AACGCATGTACTTC-1 
#>            "022"             "01"             "01"             "01"             "01" 
#> AACGCCCTCGGGAA-1 AACGCCCTCGTACA-1 AACGCCCTGGCATT-1 AACGTCGAGTATCG-1 AACGTGTGAAAGCA-1 
#>             "01"             "03"             "03"             "03"             "01" 
#> AACGTGTGGCGGAA-1 AACGTGTGTCCAAG-1 AACGTGTGTGCTTT-1 AACTACCTTAGAGA-1 AACTCACTCAAGCT-1 
#>             "04"             "01"             "01"             "01"            "021" 
#> AACTCACTTGGAGG-1 AACTCGGAAAGTGA-1 AACTCGGAAGGTCT-1 AACTCTTGCAGGAG-1 AACTGTCTCCCTTG-1 
#>            "021"             "03"            "021"             "01"            "021" 
#> AACTTGCTACGCTA-1 AACTTGCTGGGACA-1 AAGAACGAGTGTTG-1 AAGAAGACGTAGGG-1 AAGACAGAAGTCTG-1 
#>             "04"             "01"             "01"             "04"             "04" 
#> AAGACAGAGGATCT-1 AAGACAGATTACCT-1 AAGAGATGGGTAGG-1 AAGATGGAAAACAG-1 AAGATGGAGAACTC-1 
#>             "01"            "021"             "04"             "04"            "022" 
#> AAGATGGAGATAAG-1 AAGATTACAACCTG-1 AAGATTACAGATCC-1 AAGATTACCCGTTC-1 AAGATTACCGCCTT-1 
#>            "022"             "01"            "022"            "021"            "021" 
#> AAGATTACCTCAAG-1 AAGATTACTCCTCG-1 AAGCAAGAGCGAGA-1 AAGCAAGAGCTTAG-1 AAGCAAGAGGTGTT-1 
#>             "03"            "021"             "01"             "03"             "03" 
#> AAGCACTGAGCAAA-1 AAGCACTGCATACG-1 AAGCACTGGTTCTT-1 AAGCCAACGTGTTG-1 AAGCCATGAACTGC-1 
#>             "04"             "01"             "04"             "01"            "022" 
#> AAGCCATGACACGT-1 AAGCCATGCGTGAT-1 AAGCCATGTCTCGC-1 AAGCCTGACATGCA-1 AAGCCTGACCGAAT-1 
#>            "021"             "01"             "01"             "01"            "021" 
#> AAGCGACTCCTCAC-1 AAGCGACTGTGTCA-1 AAGCGACTTACAGC-1 AAGCGACTTTGACG-1 AAGCGTACGTCTTT-1 
#>            "022"             "01"             "04"            "022"             "01" 
#> AAGGCTTGCGAACT-1 AAGGTCACGGTTAC-1 AAGGTCACTGTTTC-1 AAGGTCACTTCCCG-1 AAGGTCTGACAGTC-1 
#>             "03"            "021"             "04"             "01"             "01" 
#> AAGGTCTGCAGATC-1 AAGTAACTCTGAAC-1 AAGTAACTGAGATA-1 AAGTAGGATACAGC-1 AAGTATACCGAACT-1 
#>             "01"            "021"             "04"             "03"             "01" 
#> AAGTCCGACTTGTT-1 AAGTCCGATAGAAG-1 AAGTCTCTAGTCGT-1 AAGTCTCTCGGAGA-1 AAGTGGCTTGGAGG-1 
#>             "01"             "01"             "01"             "03"             "04" 
#> AAGTTCCTCATTCT-1 AAGTTCCTTCTTAC-1 AATAAGCTCGAATC-1 AATAAGCTCGTTGA-1 AATACCCTGGACGA-1 
#>            "022"             "01"             "01"             "01"             "04" 
#> AATACCCTGGCATT-1 AATACTGAAAGGGC-1 AATACTGAATTGGC-1 AATAGGGAACCCTC-1 AATAGGGAGAATGA-1 
#>             "01"             "03"             "03"             "04"             "03" 
#> AATCAAACTATCGG-1 AATCCGGAATGCTG-1 AATCCTACCGGTAT-1 AATCCTTGACGGGA-1 AATCCTTGGTGAGG-1 
#>             "01"             "04"             "01"            "021"             "03" 
#> AATCGGTGGAACTC-1 AATCGGTGTGCTTT-1 AATCTAGAAAAGTG-1 AATCTAGAATCGGT-1 AATCTCACAGCCTA-1 
#>             "03"             "01"             "01"             "01"            "022" 
#> AATCTCACTCTAGG-1 AATCTCTGAACAGA-1 AATCTCTGCTTTAC-1 AATGATACACCAAC-1 AATGATACGGTCAT-1 
#>             "01"             "01"             "03"             "03"            "022" 
#> AATGCGTGACACCA-1 AATGCGTGGACGGA-1 AATGCGTGGCTATG-1 AATGGAGAATCGTG-1 AATGGAGATCCTTA-1 
#>             "04"            "021"             "04"            "021"             "01" 
#> AATGGCTGACACCA-1 AATGGCTGCGTGAT-1 AATGGCTGTAAAGG-1 AATGGCTGTACTCT-1 AATGGCTGTGAAGA-1 
#>             "04"             "01"             "03"             "03"             "01" 
#> AATGTAACGGTGGA-1 AATGTCCTCTTCTA-1 AATGTTGACAGTCA-1 AATGTTGAGTTGAC-1 AATGTTGATCTACT-1 
#>             "01"             "01"             "01"            "021"             "01" 
#> AATTACGAATTCCT-1 AATTACGACTTCTA-1 AATTACGAGTGAGG-1 AATTACGATTGGCA-1 AATTCCTGCTCAGA-1 
#>            "022"             "01"             "01"             "04"             "04" 
#> AATTGATGTCGCAA-1 AATTGTGACTTGGA-1 ACAAAGGAGGGTGA-1 ACAAATTGATTCTC-1 ACAAATTGCTCAGA-1 
#>            "022"             "04"             "01"            "022"            "021" 
#> ACAAATTGTTGCGA-1 ACAACCGAGGGATG-1 ACAACCGAGTTACG-1 ACAAGAGAAGTCGT-1 ACAAGAGACTTATC-1 
#>             "03"             "03"             "01"            "022"             "01" 
#> ACAAGAGAGTTGAC-1 ACAATCCTAACCGT-1 ACAATCCTTAGCGT-1 ACAATTGACTGACA-1 ACAATTGATGACTG-1 
#>             "04"             "01"             "04"             "03"             "03" 
#> ACACAGACCATACG-1 ACACCAGAGGGCAA-1 ACACCCTGGTGTTG-1 ACACGAACAGTTCG-1 ACACGATGACGCAT-1 
#>             "03"             "01"             "03"             "01"             "03" 
#> ACACGATGATGTGC-1 ACACGATGTCGTAG-1 ACACGATGTGGTCA-1 ACAGACACGGCATT-1 ACAGACACGTTGTG-1 
#>            "021"             "01"             "01"             "03"             "01" 
#> ACAGCAACACCTAG-1 ACAGCAACCTCAAG-1 ACAGGTACCCCACT-1 ACAGGTACGCTGTA-1 ACAGGTACTGGTGT-1 
#>            "021"            "022"             "01"             "01"             "03" 
#> ACAGTCGACCCAAA-1 ACAGTCGACCGATA-1 ACAGTGACTCACCC-1 ACAGTGACTCTATC-1 ACAGTGTGGTCACA-1 
#>             "01"             "03"             "01"             "01"             "01" 
#> ACAGTGTGTTGCGA-1 ACATCACTCTACTT-1 ACATGGTGAAGCCT-1 ACATGGTGCAACCA-1 ACATGGTGCGAGTT-1 
#>            "021"            "021"             "01"             "04"             "01" 
#> ACATTCTGGCATAC-1 ACATTCTGGGAACG-1 ACCAACGACATGCA-1 ACCACAGAAAGTAG-1 ACCACAGAGTTGGT-1 
#>             "01"            "021"             "01"             "01"             "01" 
#> ACCACCTGTGTGCA-1 ACCACGCTACAGCT-1 ACCACGCTACCCAA-1 ACCACGCTGCGAGA-1 ACCACGCTGCTGTA-1 
#>             "01"             "01"             "03"             "01"             "01" 
#> ACCAGCCTGACAGG-1 ACCAGTGAACGGTT-1 ACCAGTGAATACCG-1 ACCAGTGAGGGATG-1 ACCAGTGATGACTG-1 
#>             "01"             "04"            "022"             "01"            "021" 
#> ACCATTACCTTCTA-1 ACCATTACGAGATA-1 ACCATTTGTCATTC-1 ACCCAAGAACTGTG-1 ACCCAAGAATTCCT-1 
#>             "01"             "03"             "01"             "03"            "022" 
#> ACCCAAGAGGACAG-1 ACCCAAGATTCACT-1 ACCCACTGCGCCTT-1 ACCCACTGGACAGG-1 ACCCACTGGTTCAG-1 
#>             "01"             "04"            "021"             "01"             "03" 
#> ACCCACTGTCGTAG-1 ACCCAGCTCAGAAA-1 ACCCAGCTGTTAGC-1 ACCCAGCTTGCTTT-1 ACCCGTTGATGACC-1 
#>            "022"             "01"            "021"             "01"             "04" 
#> ACCCGTTGCTGCAA-1 ACCCGTTGCTTCTA-1 ACCCTCGACCTATT-1 ACCCTCGACGGTAT-1 ACCCTCGATAAGGA-1 
#>             "01"             "01"             "03"             "04"            "022" 
#> ACCCTCGATCAAGC-1 ACCGTGCTACCAGT-1 ACCGTGCTGGAACG-1 ACCTATTGCTGAGT-1 ACCTATTGTGCCCT-1 
#>            "021"             "01"             "04"             "04"            "022" 
#> ACCTCCGAGTCCTC-1 ACCTCCGATATGCG-1 ACCTCCGATGCTGA-1 ACCTCGTGAACCAC-1 ACCTGAGATATCGG-1 
#>             "01"             "01"             "01"             "01"            "021" 
#> ACCTGGCTAAGTAG-1 ACCTTTGACTCCCA-1 ACCTTTGAGGAACG-1 ACCTTTGAGGAAGC-1 ACGAACACCTTGTT-1 
#>             "03"            "022"            "022"            "022"             "03" 
#> ACGAACTGGCTATG-1 ACGAAGCTCTCCAC-1 ACGAAGCTCTGAGT-1 ACGACCCTATCTCT-1 ACGACCCTGATGAA-1 
#>            "022"             "01"             "04"            "022"             "01" 
#> ACGACCCTTGACAC-1 ACGACCCTTGACCA-1 ACGAGGGACAGGAG-1 ACGAGGGACGAACT-1 ACGAGGGATGTAGC-1 
#>             "04"             "01"            "022"             "01"             "01" 
#> ACGAGTACCCTAAG-1 ACGAGTACGAATCC-1 ACGATCGAGGACTT-1 ACGATCGAGTCACA-1 ACGATGACAATGCC-1 
#>             "04"             "04"             "03"            "021"             "01" 
#> ACGATGACTGGTCA-1 ACGATTCTACGGGA-1 ACGCAATGGTTCAG-1 ACGCACCTGTTAGC-1 ACGCCACTGAACTC-1 
#>             "01"             "03"             "03"             "04"            "021" 
#> ACGCCGGAAACCAC-1 ACGCCGGAAAGCCT-1 ACGCCGGAAATGCC-1 ACGCCTTGCTCCCA-1 ACGCGGTGGCGAGA-1 
#>            "021"             "01"             "01"            "022"             "01" 
#> ACGCGGTGTGTGGT-1 ACGCGGTGTTTGCT-1 ACGCTCACAGTACC-1 ACGCTCACCCTTGC-1 ACGCTGCTGTTCTT-1 
#>             "04"             "03"             "01"             "01"             "03" 
#> ACGGAACTCAGATC-1 ACGGAACTGTCGTA-1 ACGGAGGACTCTTA-1 ACGGATTGGGAGGT-1 ACGGATTGGTTAGC-1 
#>             "03"            "022"            "021"             "04"             "01" 
#> ACGGCTCTGAGCAG-1 ACGGCTCTTGCACA-1 ACGGTAACCGCTAA-1 ACGGTAACCTTCGC-1 ACGGTAACGGTGGA-1 
#>             "01"             "01"             "03"             "03"             "01" 
#> ACGGTAACTCGCAA-1 ACGGTATGAGTCGT-1 ACGGTATGGGTATC-1 ACGGTATGGTTGTG-1 ACGGTCCTAACGGG-1 
#>             "01"            "021"             "04"             "04"             "01" 
#> ACGGTCCTCGGGAA-1 ACGTAGACAACCAC-1 ACGTAGACTACAGC-1 ACGTCAGAAACGAA-1 ACGTCAGAGAGCTT-1 
#>             "01"             "01"             "04"             "01"            "021" 
#> ACGTCAGAGGGATG-1 ACGTCCTGATAAGG-1 ACGTCCTGTGAACC-1 ACGTCGCTCCTGAA-1 ACGTCGCTCTATTC-1 
#>             "01"            "021"            "022"             "03"            "021" 
#> ACGTCGCTTCTCAT-1 ACGTGATGCCATGA-1 ACGTGATGGGTCTA-1 ACGTGATGTAACCG-1 ACGTGATGTGACAC-1 
#>             "04"            "022"             "01"            "022"             "03" 
#> ACGTGCCTCCGTAA-1 ACGTGCCTTCTATC-1 ACGTTACTTTCCAT-1 ACGTTGGAAAAGCA-1 ACGTTGGAAACCTG-1 
#>             "01"             "03"             "01"             "01"             "03" 
#> ACGTTGGACCGTAA-1 ACGTTGGAGCCAAT-1 ACGTTGGATATGGC-1 ACGTTGGATCAGGT-1 ACGTTTACATCAGC-1 
#>            "021"             "03"             "04"            "022"             "01" 
#> ACTAAAACCCACAA-1 ACTAAAACTCGACA-1 ACTACGGAATTTCC-1 ACTACGGACCTATT-1 ACTACGGATCGCTC-1 
#>             "01"            "021"             "01"             "01"             "01" 
#> ACTACTACTAAGGA-1 ACTAGGTGGAACCT-1 ACTAGGTGGAACTC-1 ACTATCACCTTGGA-1 ACTATCACTGCCAA-1 
#>             "01"             "01"             "01"             "03"             "01" 
#> ACTCAGGACTGAAC-1 ACTCAGGATCTATC-1 ACTCAGGATTCGTT-1 ACTCCTCTCAACTG-1 ACTCGCACGAAAGT-1 
#>             "01"             "04"            "021"             "01"            "021" 
#> ACTCGCACTACGAC-1 ACTCTCCTGACACT-1 ACTCTCCTGCATAC-1 ACTCTCCTGTTTGG-1 ACTGAGACAACCAC-1 
#>            "021"             "01"             "04"             "01"             "03" 
#> ACTGAGACCCATAG-1 ACTGAGACGTTGGT-1 ACTGCCACACACGT-1 ACTGCCACTCCGTC-1 ACTGGCCTTCAGTG-1 
#>            "022"             "04"             "03"             "03"             "03" 
#> ACTGTGGACGTGTA-1 ACTGTGGATCTAGG-1 ACTGTTACCCACAA-1 ACTGTTACTGCAGT-1 ACTTAAGAACCACA-1 
#>             "03"             "04"            "021"             "01"             "01" 
#> ACTTAAGATTACTC-1 ACTTAGCTGCGTAT-1 ACTTAGCTGGGAGT-1 ACTTCAACAAGCAA-1 ACTTCAACGTAGGG-1 
#>            "021"            "022"             "01"             "03"             "03" 
#> ACTTCCCTTTCCGC-1 ACTTCTGACATGCA-1 ACTTGACTCCACAA-1 ACTTGGGAGAAAGT-1 ACTTGGGAGGTTTG-1 
#>             "01"             "04"             "04"            "021"             "01" 
#> ACTTGGGATGTGAC-1 ACTTGGGATTGACG-1 ACTTGTACCTGTCC-1 ACTTTGTGGAAAGT-1 ACTTTGTGGATAGA-1 
#>            "021"            "022"             "01"             "01"            "022" 
#> AGAAACGAAAGTAG-1 AGAAAGTGCGCAAT-1 AGAAAGTGGGGATG-1 AGAACAGAAATGCC-1 AGAACAGACGACTA-1 
#>             "04"             "01"            "021"             "03"             "04" 
#> AGAACAGAGACAAA-1 AGAACGCTTTGCTT-1 AGAAGATGTGACTG-1 AGAATGGAAGAAGT-1 AGAATTTGTAACCG-1 
#>             "01"             "01"             "01"             "03"             "01" 
#> AGAATTTGTAGAGA-1 AGACACACTGTAGC-1 AGACACTGTCAAGC-1 AGACCTGAAGTAGA-1 AGACCTGACCAACA-1 
#>             "01"             "01"            "021"            "021"             "01" 
#> AGACCTGAGGAAGC-1 AGACGTACAGAGGC-1 AGACGTACCCCTAC-1 AGACGTACCTCTTA-1 AGACGTACTCGTGA-1 
#>             "01"             "01"             "04"            "021"            "022" 
#> AGACTGACCATCAG-1 AGACTGACCCTTTA-1 AGACTTCTCATGCA-1 AGAGATGACAGTCA-1 AGAGATGACTGAAC-1 
#>             "01"             "01"             "04"             "04"             "01" 
#> AGAGATGAGGTTTG-1 AGAGATGATCTCGC-1 AGAGATGATTGTGG-1 AGAGCGGAGGCAAG-1 AGAGTCTGGTCGTA-1 
#>            "021"             "04"             "01"            "022"            "022" 
#> AGAGTGCTCAGCTA-1 AGAGTGCTCGAATC-1 AGAGTGCTGTCATG-1 AGAGTGCTGTCCTC-1 AGAGTGCTGTGTTG-1 
#>             "01"             "01"             "01"             "01"             "04" 
#> AGATATACCCGTAA-1 AGATATACGATGAA-1 AGATATACTGTTCT-1 AGATATTGCCTACC-1 AGATATTGGCCAAT-1 
#>             "03"             "01"             "04"             "01"            "022" 
#> AGATCGTGTCTGGA-1 AGATCGTGTTTGTC-1 AGATCTCTATCACG-1 AGATTAACGTTCTT-1 AGATTCCTATCGTG-1 
#>            "021"             "04"             "04"            "022"             "01" 
#> AGATTCCTCACTTT-1 AGATTCCTGACGAG-1 AGATTCCTGTTCAG-1 AGCAAAGATATGCG-1 AGCACAACAGTCTG-1 
#>            "021"            "021"             "03"             "01"             "01" 
#> AGCACTGAGGGAGT-1 AGCACTGATATGCG-1 AGCACTGATGCTTT-1 AGCACTGATTGCGA-1 AGCATCGAAGATCC-1 
#>             "01"             "01"            "022"             "01"             "01" 
#> AGCATCGAAGGGTG-1 AGCATCGAGCTTCC-1 AGCATCGAGTGAGG-1 AGCATCGATAACCG-1 AGCATGACGATGAA-1 
#>             "04"            "021"             "01"            "022"             "03" 
#> AGCCAATGGGGAGT-1 AGCCAATGTATCTC-1 AGCCACCTGGATCT-1 AGCCGGTGCCAATG-1 AGCCGGTGTGTTTC-1 
#>            "022"             "01"             "03"             "01"             "01" 
#> AGCCGTCTCAATCG-1 AGCCGTCTGAGAGC-1 AGCCTCACGTTCGA-1 AGCCTCACTGTCAG-1 AGCCTCTGCAGTTG-1 
#>             "01"             "01"             "01"            "022"             "04" 
#> AGCCTCTGCCAATG-1 AGCGAACTGGATCT-1 AGCGAACTTACTGG-1 AGCGATACGGAGCA-1 AGCGATTGAGATCC-1 
#>             "03"             "01"             "01"             "01"             "03" 
#> AGCGCCGAATCTCT-1 AGCGCCGACAGAGG-1 AGCGCTCTACCTTT-1 AGCGGCACCGGGAA-1 AGCGGCTGATGTGC-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> AGCGGGCTTGCCAA-1 AGCGTAACATGCTG-1 AGCGTAACTGAGAA-1 AGCTCGCTACTGGT-1 AGCTCGCTCTGCTC-1 
#>             "01"             "01"            "022"             "01"             "01" 
#> AGCTGAACCATACG-1 AGCTGAACCTCTCG-1 AGCTGCCTTGGGAG-1 AGCTGCCTTTCATC-1 AGCTGCCTTTCTGT-1 
#>            "022"             "01"            "021"             "01"             "01" 
#> AGCTGTGATCCAAG-1 AGCTTTACAAGTAG-1 AGCTTTACACCAAC-1 AGCTTTACTCTCAT-1 AGGAAATGAGGAGC-1 
#>             "01"             "01"             "01"             "04"             "01" 
#> AGGAACCTCTTAGG-1 AGGAACCTTGCCTC-1 AGGAATGATAACGC-1 AGGAATGATTTGTC-1 AGGAGTCTGGTTTG-1 
#>            "022"             "03"             "01"             "01"             "01" 
#> AGGAGTCTTGTCAG-1 AGGATAGACATTTC-1 AGGATAGAGGATTC-1 AGGATGCTACTAGC-1 AGGATGCTTTAGGC-1 
#>             "01"             "01"             "03"             "04"             "03" 
#> AGGCAACTGAAGGC-1 AGGCAGGAGTACCA-1 AGGCCTCTAGTCGT-1 AGGCCTCTCGGAGA-1 AGGCCTCTCGTAAC-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> AGGGACGACGTTGA-1 AGGGACGAGTCAAC-1 AGGGACGAGTTGTG-1 AGGGACGATAGAGA-1 AGGGACGATGCATG-1 
#>             "01"             "03"             "01"             "01"             "03" 
#> AGGGAGTGAGCCTA-1 AGGGCCACCATACG-1 AGGGCGCTAACCAC-1 AGGGCGCTATGGTC-1 AGGGTGGACAGTCA-1 
#>             "01"             "01"            "021"             "03"             "04" 
#> AGGGTGGACTCAAG-1 AGGGTGGAGTTGCA-1 AGGGTTTGTTCATC-1 AGGTCATGAGTGTC-1 AGGTCATGCTTATC-1 
#>            "021"             "03"            "021"             "04"             "01" 
#> AGGTCTGATTCTCA-1 AGGTGGGAAGAATG-1 AGGTGGGAAGTTCG-1 AGGTGTTGGTTACG-1 AGGTTCGAACCTCC-1 
#>            "022"             "01"             "01"             "04"            "021" 
#> AGGTTCGAACGTAC-1 AGGTTCGAGGGTGA-1 AGTAAGGAGTTTGG-1 AGTAAGGATTCTTG-1 AGTAATACATCACG-1 
#>            "021"             "01"             "01"             "01"             "03" 
#> AGTAATACCGAACT-1 AGTAATTGTCCCAC-1 AGTACGTGAGGGTG-1 AGTACGTGCTGCAA-1 AGTACGTGCTTGGA-1 
#>             "04"             "01"             "01"             "01"             "01" 
#> AGTACTCTACGTGT-1 AGTACTCTCAACCA-1 AGTACTCTCGGTAT-1 AGTAGGCTTGCCTC-1 AGTATAACTTGTCT-1 
#>             "04"             "03"             "01"            "022"            "022" 
#> AGTATCCTAGAACA-1 AGTCACGATGAGCT-1 AGTCAGACGAATAG-1 AGTCAGACGCTTAG-1 AGTCAGACTAGAGA-1 
#>             "01"             "03"             "01"             "01"             "03" 
#> AGTCAGACTGCACA-1 AGTCCAGATATCTC-1 AGTCCAGATTTCAC-1 AGTCGAACCAACCA-1 AGTCGCCTCCGTAA-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> AGTCTACTAGGGTG-1 AGTCTACTTGCATG-1 AGTCTTACACCACA-1 AGTCTTACTTCGCC-1 AGTCTTACTTCGGA-1 
#>            "021"            "022"             "01"             "01"             "03" 
#> AGTGACTGCAACTG-1 AGTGTTCTAACCTG-1 AGTGTTCTATAAGG-1 AGTGTTCTCACTTT-1 AGTTAAACCACTTT-1 
#>            "022"             "01"             "01"            "021"             "01" 
#> AGTTATGAACAGTC-1 AGTTATGACTGAGT-1 AGTTATGAGTTCAG-1 AGTTCTACCAGCTA-1 AGTTCTTGAAGCCT-1 
#>            "021"             "01"             "01"            "021"             "03" 
#> AGTTGTCTACTACG-1 AGTTTAGATGGTCA-1 AGTTTCACGGTCTA-1 AGTTTGCTACAGTC-1 AGTTTGCTACTGGT-1 
#>             "01"             "01"             "03"             "01"             "03" 
#> AGTTTGCTCCAAGT-1 ATAAACACAGTGCT-1 ATAAACACCACCAA-1 ATAACAACATGCTG-1 ATAACAACGTCTAG-1 
#>             "01"             "04"             "01"            "021"             "01" 
#> ATAACAACTTTGTC-1 ATAACATGTACTCT-1 ATAACCCTGTTGGT-1 ATAACCCTTGGTAC-1 ATAAGTACGAATGA-1 
#>             "01"             "01"             "01"             "01"             "04" 
#> ATAAGTTGGTACGT-1 ATAAGTTGTCTAGG-1 ATAATCGAGCTGAT-1 ATAATCGATGGTTG-1 ATAATGACCTACTT-1 
#>            "021"             "01"             "04"             "01"             "01" 
#> ATAATGACTCGTGA-1 ATACAATGTTAGGC-1 ATACCACTCGTACA-1 ATACCACTCTAAGC-1 ATACCACTGCCAAT-1 
#>            "021"             "01"            "021"            "022"             "03" 
#> ATACCGGAATGCTG-1 ATACCGGACATTTC-1 ATACCGGACTTCGC-1 ATACCGGAGGTGTT-1 ATACCGGATCTCGC-1 
#>            "022"            "021"             "01"            "021"             "01" 
#> ATACCTACGCATCA-1 ATACCTTGGGGCAA-1 ATACGGACAGACTC-1 ATACGGACCTACTT-1 ATACGGACGAGGTG-1 
#>             "01"             "01"            "021"            "021"             "04" 
#> ATACGGACTATGCG-1 ATACGGACTCTGGA-1 ATACGTCTTAACGC-1 ATACTCTGCTTCGC-1 ATACTCTGGTATGC-1 
#>             "04"            "021"            "021"            "022"             "03" 
#> ATAGATACCATGGT-1 ATAGATACGACGAG-1 ATAGATTGGTGTAC-1 ATAGCCGAACGGAG-1 ATAGCGTGCAGATC-1 
#>             "01"             "01"             "04"             "01"             "01" 
#> ATAGCGTGCCCTTG-1 ATAGCGTGGTATCG-1 ATAGCGTGTCTCTA-1 ATAGCTCTCTGATG-1 ATAGCTCTGAGGTG-1 
#>            "021"            "021"             "01"             "01"             "01" 
#> ATAGGAGAAACAGA-1 ATAGGCTGTCAGAC-1 ATAGTCCTAGTGTC-1 ATAGTCCTTGCATG-1 ATAGTCCTTGTCGA-1 
#>            "022"             "01"            "021"             "01"             "01" 
#> ATAGTTGACAACTG-1 ATAGTTGACCCTCA-1 ATAGTTGAGACGTT-1 ATAGTTGATAAGCC-1 ATATACGAAGCCAT-1 
#>             "01"            "022"             "01"             "01"             "01" 
#> ATATACGAATTGGC-1 ATATAGTGGAATGA-1 ATATGCCTAGATCC-1 ATATGCCTGGACAG-1 ATATGCCTTCTCTA-1 
#>             "01"            "021"            "021"             "01"             "01" 
#> ATATGCCTTGGTAC-1 ATCAAATGAGCCTA-1 ATCAAATGGGTAAA-1 ATCAACCTAAACGA-1 ATCAACCTGAGGAC-1 
#>             "01"            "021"            "022"             "01"             "01" 
#> ATCAACCTTCTCTA-1 ATCAACCTTTGTCT-1 ATCACACTTTGTCT-1 ATCACGGATTTCGT-1 ATCATCTGACACCA-1 
#>             "03"             "01"             "01"             "04"             "03" 
#> ATCATGCTAGAGTA-1 ATCATGCTGAACCT-1 ATCCAGGACGCTAA-1 ATCCAGGATGGAAA-1 ATCCATACTCCTTA-1 
#>             "03"             "04"            "022"             "01"            "021" 
#> ATCCATACTTCATC-1 ATCCCGTGCAGTCA-1 ATCCCGTGCATGCA-1 ATCCCGTGGCTGAT-1 ATCCGCACGCATCA-1 
#>            "022"             "03"             "04"             "04"             "04" 
#> ATCCTAACGACGGA-1 ATCCTAACGCTACA-1 ATCGACGAAACTGC-1 ATCGACGAATGACC-1 ATCGAGTGGACGTT-1 
#>             "04"             "03"            "022"             "01"             "03" 
#> ATCGCAGAATCTCT-1 ATCGCAGAGTGTCA-1 ATCGCCACTGAGGG-1 ATCGCCTGGGTCAT-1 ATCGCCTGTGGCAT-1 
#>            "022"             "04"             "03"             "01"             "04" 
#> ATCGCGCTCAGAGG-1 ATCGCGCTGGGATG-1 ATCGCGCTTTTCGT-1 ATCGGAACCAGTCA-1 ATCGGTGAGTCAAC-1 
#>            "021"             "01"             "04"             "01"             "01" 
#> ATCGGTGATTGCAG-1 ATCGTTTGCCTACC-1 ATCGTTTGGGTACT-1 ATCGTTTGTGCCAA-1 ATCTACACCCGCTT-1 
#>             "01"            "022"            "021"            "021"            "021" 
#> ATCTACACCGGGAA-1 ATCTCAACAGGAGC-1 ATCTCAACCTCGAA-1 ATCTCAACCTTGTT-1 ATCTGGGAAACCAC-1 
#>             "01"             "04"             "01"            "021"            "022" 
#> ATCTGGGAAGTGTC-1 ATCTGGGATTCCGC-1 ATCTGTTGAACGGG-1 ATCTGTTGACCTCC-1 ATCTGTTGCCTTCG-1 
#>            "022"             "01"             "01"             "01"            "022" 
#> ATCTGTTGGTTGCA-1 ATCTTGACACCAAC-1 ATCTTGACCTCCCA-1 ATCTTTCTGCATCA-1 ATCTTTCTGTTTCT-1 
#>             "01"             "01"            "021"             "01"             "01" 
#> ATCTTTCTTGTCCC-1 ATGAAACTCTGTGA-1 ATGAAACTGAGGCA-1 ATGAAGGAACAGCT-1 ATGAAGGACCTGTC-1 
#>             "03"             "01"             "01"             "03"             "04" 
#> ATGAAGGACCTTAT-1 ATGAAGGACTAGTG-1 ATGAAGGACTTGCC-1 ATGACGTGACGACT-1 ATGACGTGATCGGT-1 
#>             "04"             "04"             "03"             "04"            "022" 
#> ATGAGAGAAAGTGA-1 ATGAGAGAACGCAT-1 ATGAGAGAAGTAGA-1 ATGAGCACACAGCT-1 ATGAGCACATCTTC-1 
#>             "01"             "01"             "04"             "01"             "01" 
#> ATGATAACTTCACT-1 ATGATATGAAACAG-1 ATGATATGACTGGT-1 ATGATATGAGCACT-1 ATGATATGGTCATG-1 
#>             "03"             "01"             "01"             "01"             "01" 
#> ATGATATGGTGCTA-1 ATGATATGTTGTCT-1 ATGCACGAATGTCG-1 ATGCACGACTGTAG-1 ATGCACGAGAACCT-1 
#>             "03"            "022"             "04"             "01"             "04" 
#> ATGCACGAGTTCGA-1 ATGCACGATTGGTG-1 ATGCAGTGTTACCT-1 ATGCAGTGTTCTAC-1 ATGCCAGAACGACT-1 
#>             "01"            "022"             "04"             "01"             "01" 
#> ATGCCAGACAGTCA-1 ATGCCGCTTGAACC-1 ATGCGATGCTATGG-1 ATGCGATGCTGAGT-1 ATGCGATGGTTACG-1 
#>            "021"            "022"            "022"             "01"             "04" 
#> ATGCGCCTTCATTC-1 ATGCTTTGCGAATC-1 ATGCTTTGGGCGAA-1 ATGCTTTGTAGTCG-1 ATGGACACATCGGT-1 
#>             "01"             "01"             "01"             "04"             "01" 
#> ATGGACACGCATCA-1 ATGGGTACAACCTG-1 ATGGGTACATCGGT-1 ATGGGTACTATTCC-1 ATGGGTACTGGGAG-1 
#>             "03"             "04"             "03"             "01"             "01" 
#> ATGTAAACACCTCC-1 ATGTAAACCCGCTT-1 ATGTAAACGGGATG-1 ATGTAAACTCTCCG-1 ATGTAAACTTCACT-1 
#>             "01"             "01"            "022"             "01"            "021" 
#> ATGTACCTCAGTCA-1 ATGTACCTTAGTCG-1 ATGTACCTTTATCC-1 ATGTACCTTTCACT-1 ATGTCACTAATGCC-1 
#>             "01"             "01"            "021"             "03"            "021" 
#> ATGTCACTCTGCTC-1 ATGTCGGAGGTGAG-1 ATGTTCACAGTCTG-1 ATGTTCACCGTAGT-1 ATGTTGCTTTCAGG-1 
#>             "01"             "01"            "021"             "01"             "01" 
#> ATTAACGATGAGAA-1 ATTAACGATGCAAC-1 ATTAAGACTGCAGT-1 ATTACCTGCCTTAT-1 ATTACCTGGAGGAC-1 
#>             "03"             "03"             "01"            "021"            "022" 
#> ATTAGATGTTTCAC-1 ATTATGGAATCTCT-1 ATTCAAGAACGGGA-1 ATTCAAGACCTTTA-1 ATTCAGCTCATTGG-1 
#>             "01"             "01"             "01"             "01"             "03" 
#> ATTCCAACCATTGG-1 ATTCCAACTTAGGC-1 ATTCGACTCACTAG-1 ATTCGACTGAATAG-1 ATTCGACTTTTGTC-1 
#>            "021"             "03"             "03"            "021"            "022" 
#> ATTCGGGAAAGGCG-1 ATTCGGGATTAGGC-1 ATTCTTCTGATACC-1 ATTGAATGGACGGA-1 ATTGATGAAGGTTC-1 
#>            "021"             "01"             "01"             "01"             "01" 
#> ATTGATGACTGAGT-1 ATTGATGAGCGAAG-1 ATTGATGATCTATC-1 ATTGCACTGACGGA-1 ATTGCACTGAGAGC-1 
#>             "01"             "01"             "01"             "01"            "022" 
#> ATTGCACTGGAGCA-1 ATTGCACTTAGCCA-1 ATTGCACTTGCTTT-1 ATTGCTTGTTACTC-1 ATTGGTCTGACTAC-1 
#>            "021"             "01"            "022"             "04"             "04" 
#> ATTGGTCTTGTCTT-1 ATTGTAGATTCCCG-1 ATTGTAGATTGCAG-1 ATTGTCTGCGTACA-1 ATTTAGGAACCATG-1 
#>             "04"            "022"             "01"             "01"            "022" 
#> ATTTAGGACAGAGG-1 ATTTCCGAGATGAA-1 ATTTCCGAGTGCTA-1 ATTTCGTGTATGGC-1 ATTTCTCTACTTTC-1 
#>             "01"             "01"             "01"             "03"            "022" 
#> ATTTCTCTAGCAAA-1 ATTTCTCTCACTTT-1 ATTTCTCTTCCCAC-1 ATTTGCACAAGATG-1 CAAAGCACAGCTCA-1 
#>             "01"            "022"             "01"            "021"             "01" 
#> CAAAGCACCGTAAC-1 CAAAGCACGGTAAA-1 CAAAGCTGAAAGTG-1 CAAAGCTGTTGCTT-1 CAAATATGTGACAC-1 
#>             "04"             "03"             "01"            "021"             "01" 
#> CAAATTGAGGGCAA-1 CAAATTGATGGAGG-1 CAACCAGAAAAGTG-1 CAACCAGAAGTGCT-1 CAACCAGAGTTCAG-1 
#>             "01"            "021"             "01"             "01"            "022" 
#> CAACCAGATAGAAG-1 CAACCGCTGTTCAG-1 CAACCGCTTTGAGC-1 CAACGATGCGCAAT-1 CAACGTGACTCCAC-1 
#>            "021"             "01"             "01"            "022"            "022" 
#> CAACGTGAGCCATA-1 CAACGTGATCAAGC-1 CAAGAAGACCACAA-1 CAAGAAGACGTCTC-1 CAAGAAGATTCTAC-1 
#>             "03"            "021"             "03"            "022"             "01" 
#> CAAGACTGACCTGA-1 CAAGACTGAGTAGA-1 CAAGCTGACCATAG-1 CAAGCTGATCTATC-1 CAAGGACTGTTCAG-1 
#>             "04"             "04"            "022"             "03"             "01" 
#> CAAGGACTTCTTTG-1 CAAGGTTGCTCCAC-1 CAAGGTTGTCATTC-1 CAAGGTTGTCTGGA-1 CAAGTCGAAACAGA-1 
#>             "03"             "01"             "04"             "03"             "04" 
#> CAAGTCGATAGCGT-1 CAATAAACGCCATA-1 CAATAATGAACTGC-1 CAATATGACATGGT-1 CAATATGACCTTCG-1 
#>            "021"            "021"            "021"             "01"             "03" 
#> CAATATGACGTTAG-1 CAATATGAGGAGCA-1 CAATCGGAGAAACA-1 CAATCTACTGACTG-1 CAATTCACCCAACA-1 
#>             "01"             "01"             "01"             "03"             "03" 
#> CAATTCACGATAGA-1 CAATTCACTTGTGG-1 CAATTCTGCTTGTT-1 CAATTCTGGCGTAT-1 CACAACGATACGAC-1 
#>             "01"             "01"            "022"            "022"             "01" 
#> CACAATCTTGTTCT-1 CACAATCTTTCCAT-1 CACACCTGCTTGAG-1 CACACCTGTATGGC-1 CACAGAACCCTTGC-1 
#>             "01"             "01"             "01"             "01"             "04" 
#> CACAGAACCTGATG-1 CACAGATGGGATTC-1 CACAGATGGTTTCT-1 CACAGCCTGATACC-1 CACAGCCTTGCCAA-1 
#>             "01"             "01"            "021"             "01"            "022" 
#> CACAGCCTTGTAGC-1 CACAGTGATGAAGA-1 CACATACTACAGCT-1 CACATGGAACACGT-1 CACATGGAAGTCGT-1 
#>             "01"            "021"             "03"             "01"             "01" 
#> CACCACTGCCAACA-1 CACCACTGGCGAAG-1 CACCCATGTTCTGT-1 CACCGGGAATCGAC-1 CACCGGGACGAGAG-1 
#>             "01"             "03"             "03"             "01"             "03" 
#> CACCGGGACGTGTA-1 CACCGGGACTTCTA-1 CACCGGGACTTGCC-1 CACCGGGATTCGGA-1 CACCGTACTAAGGA-1 
#>             "01"             "03"             "03"             "03"             "04" 
#> CACCGTACTAGCGT-1 CACCTGACACCCAA-1 CACCTGACCAGAAA-1 CACCTGACCTCAAG-1 CACCTGACGAAAGT-1 
#>             "01"             "03"             "01"             "03"             "04" 
#> CACCTGACTCGTAG-1 CACGAAACTTCCGC-1 CACGACCTCGATAC-1 CACGCTACAGAAGT-1 CACGCTACTGTTCT-1 
#>             "01"             "04"             "04"             "01"             "04" 
#> CACGGGACAGAGTA-1 CACGGGACATAAGG-1 CACGGGACGTAGGG-1 CACGGGTGCTTCGC-1 CACGGGTGGAGGAC-1 
#>             "01"             "01"             "01"             "03"             "03" 
#> CACGGGTGTGTTTC-1 CACTAACTCCTAAG-1 CACTAACTGAAAGT-1 CACTAGGATGATGC-1 CACTATACCCCGTT-1 
#>             "01"             "04"             "01"             "04"             "04" 
#> CACTATACGTTTGG-1 CACTGAGACAGTCA-1 CACTGCACTTCATC-1 CACTGCTGAGACTC-1 CACTGCTGGAAAGT-1 
#>             "03"            "021"             "01"            "022"             "01" 
#> CACTTAACCGAATC-1 CACTTAACCGTACA-1 CACTTTGACTCTAT-1 CACTTTGAGCTGTA-1 CAGAAGCTCTCAAG-1 
#>             "01"             "04"             "03"             "01"             "01" 
#> CAGACATGAACGGG-1 CAGACATGTCGACA-1 CAGACCCTAAGGTA-1 CAGACCCTAATGCC-1 CAGACCCTAGGAGC-1 
#>             "01"             "01"            "022"             "01"             "01" 
#> CAGACTGAGTATGC-1 CAGATCGAATGTCG-1 CAGATCGACCTGAA-1 CAGATCGATATGGC-1 CAGATGACATTCTC-1 
#>             "01"             "04"             "01"             "01"             "03" 
#> CAGCAATGCCTTCG-1 CAGCAATGGAGGGT-1 CAGCAATGGTGCTA-1 CAGCAATGTCTACT-1 CAGCAATGTGACCA-1 
#>             "01"             "03"             "01"            "021"             "01" 
#> CAGCAATGTGAGGG-1 CAGCACCTAAGCCT-1 CAGCACCTAGGCGA-1 CAGCACCTGTAGGG-1 CAGCATGACAACCA-1 
#>            "021"             "01"             "01"            "022"            "021" 
#> CAGCATGAGACGTT-1 CAGCCTACCCAACA-1 CAGCCTTGCTACCC-1 CAGCCTTGGGGACA-1 CAGCGGACACCCTC-1 
#>             "01"             "01"            "021"             "01"             "01" 
#> CAGCGGACCTTTAC-1 CAGCGTCTAAAGCA-1 CAGCGTCTTATCGG-1 CAGCTAGATGTGAC-1 CAGCTCTGAGGCGA-1 
#>             "03"             "01"             "01"            "021"             "01" 
#> CAGCTCTGCAAGCT-1 CAGCTCTGTCGTAG-1 CAGCTCTGTGTGGT-1 CAGGAACTAACTGC-1 CAGGAACTCTCAGA-1 
#>             "03"            "022"             "03"             "01"            "021" 
#> CAGGCCGAACACCA-1 CAGGCCGAACACGT-1 CAGGCCGAACGACT-1 CAGGCCGAATCTCT-1 CAGGCCGACTAGCA-1 
#>             "01"             "01"             "01"            "022"             "04" 
#> CAGGGCACCATACG-1 CAGGGCACCCAACA-1 CAGGGCACTCCCGT-1 CAGGTAACAGACTC-1 CAGGTATGAGTCGT-1 
#>             "04"             "01"             "01"            "021"             "01" 
#> CAGGTATGTGCTTT-1 CAGGTTGAGGATCT-1 CAGTGATGGACGGA-1 CAGTGATGGCTAAC-1 CAGTGATGGGACAG-1 
#>             "01"             "04"             "04"             "03"             "01" 
#> CAGTGATGTAAGGA-1 CAGTGATGTACGCA-1 CAGTGTGATGTCAG-1 CAGTTACTAAGGTA-1 CAGTTACTGATAGA-1 
#>             "04"             "04"             "01"             "04"             "01" 
#> CAGTTGGAAAGAGT-1 CAGTTGGACATACG-1 CAGTTTACACACGT-1 CAGTTTACCCCAAA-1 CATAAAACGGAGCA-1 
#>            "022"             "01"             "03"             "01"            "021" 
#> CATAAATGAACTGC-1 CATAACCTTCTCCG-1 CATACTACCTCGAA-1 CATACTACCTGAAC-1 CATACTACGTACCA-1 
#>             "01"             "01"             "01"             "01"            "021" 
#> CATACTTGGGTTAC-1 CATAGTCTAATCGC-1 CATAGTCTCACTTT-1 CATATAGACTAAGC-1 CATATAGATCAGGT-1 
#>            "022"             "01"             "01"            "021"             "04" 
#> CATCAACTAGAAGT-1 CATCAACTCCCTCA-1 CATCAGGACTTCCG-1 CATCAGGATAGCCA-1 CATCAGGATCCTAT-1 
#>             "01"             "01"             "03"             "03"            "022" 
#> CATCAGGATGCACA-1 CATCAGGATTTCGT-1 CATCATACCGCATA-1 CATCATACGGAGCA-1 CATCATACTCAAGC-1 
#>            "022"            "021"            "022"             "04"             "01" 
#> CATCGCTGGGATCT-1 CATCGCTGTGGCAT-1 CATCGGCTATGCTG-1 CATCGGCTTTGGCA-1 CATCTCCTATGTGC-1 
#>             "01"             "04"             "01"             "01"             "04" 
#> CATCTCCTCGAACT-1 CATGAGACACGGGA-1 CATGAGACGTTGAC-1 CATGAGACTCGCCT-1 CATGCCACGGGTGA-1 
#>            "022"             "04"             "03"             "01"             "01" 
#> CATGCCACTGCCAA-1 CATGCGCTAGTCAC-1 CATGCGCTCAGATC-1 CATGCGCTTTGCAG-1 CATGGCCTAGGGTG-1 
#>             "01"            "022"            "021"            "022"            "021" 
#> CATGGCCTGTGCAT-1 CATGTACTATCGTG-1 CATGTTACAGTCGT-1 CATGTTACCTGAGT-1 CATGTTTGGGGATG-1 
#>             "01"             "03"             "03"             "01"            "021" 
#> CATTACACACGGAG-1 CATTACACCAACTG-1 CATTACACGGAGTG-1 CATTACACTACTCT-1 CATTAGCTCCACAA-1 
#>             "04"             "03"             "01"             "01"            "021" 
#> CATTGACTAGCGGA-1 CATTGGGACTCGAA-1 CATTGTACAGCGTT-1 CATTGTACTCGATG-1 CATTGTACTTATCC-1 
#>            "021"             "01"             "01"             "04"             "01" 
#> CATTGTACTTTGCT-1 CATTGTTGCTAGTG-1 CATTTCGACTCTAT-1 CATTTCGAGATACC-1 CATTTGACCACACA-1 
#>            "022"             "01"             "03"             "03"             "03" 
#> CATTTGACCCTGAA-1 CATTTGTGACGACT-1 CATTTGTGCATTGG-1 CATTTGTGCGGAGA-1 CATTTGTGGGATCT-1 
#>             "03"             "04"             "01"             "01"             "04" 
#> CCAAAGTGCTACGA-1 CCAAAGTGTGAGAA-1 CCAACCTGAAGTAG-1 CCAACCTGACGTAC-1 CCAACCTGTTCGCC-1 
#>            "022"            "021"             "03"            "021"            "021" 
#> CCAAGAACCCAATG-1 CCAAGAACGTAGCT-1 CCAAGAACGTGTCA-1 CCAAGAACTACTGG-1 CCAAGAACTCCTAT-1 
#>             "01"             "01"             "01"             "03"             "04" 
#> CCAAGATGTCATTC-1 CCAAGATGTTTCAC-1 CCAAGTGAGGAACG-1 CCAAGTGATCAAGC-1 CCAATTTGAACGTC-1 
#>             "01"             "01"             "01"             "01"            "021" 
#> CCACCATGAACGTC-1 CCACCATGATCGGT-1 CCACCATGGACGAG-1 CCACCATGGGGAGT-1 CCACCATGTCCTGC-1 
#>             "01"             "01"            "022"             "01"             "03" 
#> CCACTGACCCGCTT-1 CCACTGTGGGAAGC-1 CCACTGTGTGTAGC-1 CCACTTCTCGGGAA-1 CCAGAAACCCTGTC-1 
#>            "021"            "021"             "01"            "022"             "04" 
#> CCAGAAACGAACTC-1 CCAGAAACGGTCTA-1 CCAGACCTCTGAGT-1 CCAGACCTTGTGGT-1 CCAGCACTGCGATT-1 
#>             "01"             "01"             "04"             "01"            "022" 
#> CCAGCGGAAAGGCG-1 CCAGCGGACGACTA-1 CCAGCGGATGGGAG-1 CCAGCTACACAGTC-1 CCAGCTACCAGCTA-1 
#>            "021"            "021"             "01"             "01"             "04" 
#> CCAGGTCTACACCA-1 CCAGGTCTAGCATC-1 CCAGGTCTATGGTC-1 CCAGTCACACTGGT-1 CCAGTCACACTGTG-1 
#>             "04"            "021"             "01"            "021"             "04" 
#> CCAGTCACGTTGTG-1 CCAGTGCTAACCAC-1 CCAGTGCTCGTAGT-1 CCATCCGAAAGCAA-1 CCATCCGAACGACT-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> CCATCCGAAGGTTC-1 CCATCCGATTCGCC-1 CCATCGTGAACGGG-1 CCATCGTGCTAGAC-1 CCCAACACCTCGCT-1 
#>             "04"            "021"             "01"            "022"             "04" 
#> CCCAACACGCATCA-1 CCCAACACTTTGTC-1 CCCAACTGCAATCG-1 CCCAGACTGCCTTC-1 CCCAGACTGGTTTG-1 
#>             "01"            "022"            "021"            "022"             "04" 
#> CCCAGACTTTCGCC-1 CCCAGTTGCAGTTG-1 CCCAGTTGGGTACT-1 CCCAGTTGTCTATC-1 CCCGATTGTGTTTC-1 
#>            "022"            "022"             "01"             "04"             "01" 
#> CCCGGAGAAGGGTG-1 CCCTACGAATTGGC-1 CCCTAGTGCAAAGA-1 CCCTCAGACACTTT-1 CCCTCAGACGAGAG-1 
#>            "021"            "021"             "01"             "04"             "01" 
#> CCCTCAGAGGTCAT-1 CCCTGAACTAAAGG-1 CCCTGATGCAACCA-1 CCCTGATGCAAGCT-1 CCCTTACTAACCAC-1 
#>             "01"             "04"             "01"             "04"            "022" 
#> CCCTTACTGCAGTT-1 CCGAAAACCTTGTT-1 CCGACACTGGTTTG-1 CCGACTACCCAGTA-1 CCGACTACCGTGTA-1 
#>             "01"            "022"             "01"            "022"             "01" 
#> CCGACTACTGAGGG-1 CCGATAGACCTAAG-1 CCGATAGAGTTGGT-1 CCGCGAGACACACA-1 CCGCGAGAGGTTCA-1 
#>             "01"             "01"            "022"            "021"             "01" 
#> CCGCTATGGGACGA-1 CCGCTATGTGCAAC-1 CCGCTATGTGCACA-1 CCGGTACTGTCCTC-1 CCGTACACAAGCAA-1 
#>             "04"            "022"            "021"             "01"             "01" 
#> CCGTACACAGCGTT-1 CCGTACACGTCATG-1 CCGTACACGTTGGT-1 CCGTACACTAACGC-1 CCTAAACTTTCGTT-1 
#>             "04"             "03"            "022"             "01"             "01" 
#> CCTAAGGACCCAAA-1 CCTAAGGACTAGCA-1 CCTAAGGAGGGCAA-1 CCTAAGGATGATGC-1 CCTAAGGATGTCAG-1 
#>             "01"            "021"             "03"             "01"             "01" 
#> CCTACCGACTCTTA-1 CCTACCGAGGGATG-1 CCTAGAGAGGTGAG-1 CCTATAACCAAAGA-1 CCTATAACGAGACG-1 
#>             "01"             "04"             "04"             "01"            "021" 
#> CCTATAACTCAGAC-1 CCTATAACTGCATG-1 CCTCGAACACTTTC-1 CCTCGAACCCGTAA-1 CCTCGAACGTATCG-1 
#>             "01"            "022"             "03"            "022"             "01" 
#> CCTCGAACTTACTC-1 CCTCTACTCTTCGC-1 CCTCTACTGGCATT-1 CCTGACTGAAGTAG-1 CCTGACTGGGGAGT-1 
#>             "01"            "021"             "01"             "01"             "01" 
#> CCTGACTGTGTCTT-1 CCTGCAACACGTTG-1 CCTGGACTCGTGAT-1 CCTTAATGCCCAAA-1 CCTTAATGTTCTAC-1 
#>             "04"            "021"             "01"             "04"            "022" 
#> CCTTCACTACGACT-1 CCTTCACTCAGTCA-1 CCTTCACTGGAGTG-1 CCTTTAGATTCATC-1 CGAACATGCCCTAC-1 
#>             "01"             "04"            "021"            "021"            "021" 
#> CGAACATGTCAGAC-1 CGAAGACTGGAACG-1 CGAAGACTGTTACG-1 CGAAGGGAAACCTG-1 CGAAGGGATCCGAA-1 
#>             "01"             "01"             "01"             "03"             "04" 
#> CGAAGTACCAACTG-1 CGAATCGAGGAGCA-1 CGAATCGAGGAGGT-1 CGACAAACCCATAG-1 CGACAAACCGACAT-1 
#>             "04"            "021"             "01"             "01"             "04" 
#> CGACCACTAAAGTG-1 CGACCACTGCCAAT-1 CGACCGGAAGGTCT-1 CGACCGGATGGAAA-1 CGACCTTGCTAGTG-1 
#>             "03"             "03"             "01"             "01"             "01" 
#> CGACGTCTATCGTG-1 CGACGTCTCGTGTA-1 CGACGTCTGAGGCA-1 CGACTCACGTCGTA-1 CGACTCACGTTGCA-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> CGACTCTGTGTGAC-1 CGACTGCTTCCTCG-1 CGAGAACTAAGGCG-1 CGAGAACTACGTTG-1 CGAGAACTTGTTCT-1 
#>             "01"            "021"             "03"             "01"            "021" 
#> CGAGATTGGACACT-1 CGAGATTGGCCATA-1 CGAGCCGAACACCA-1 CGAGCCGAGGCGAA-1 CGAGCGTGCTCCAC-1 
#>             "03"             "03"             "01"             "01"             "01" 
#> CGAGCGTGGATACC-1 CGAGCGTGTATGCG-1 CGAGGAGACCTCCA-1 CGAGGAGATGTCGA-1 CGAGGCACCTATGG-1 
#>             "01"            "021"             "04"             "01"             "03" 
#> CGAGGCACTATGCG-1 CGAGGCACTCTTCA-1 CGAGGCTGACGCTA-1 CGAGGCTGGCAGTT-1 CGAGGGCTACGACT-1 
#>            "022"             "01"             "03"            "021"             "04" 
#> CGAGGGCTCGAATC-1 CGAGTATGTCACCC-1 CGATACGAACAGTC-1 CGATACGACAGGAG-1 CGATACGATTCACT-1 
#>             "01"            "022"            "022"             "03"             "04" 
#> CGATAGACCCGTAA-1 CGATAGACCGTACA-1 CGATAGACGTAGGG-1 CGATAGACTGTTCT-1 CGATCAGAAGAACA-1 
#>            "021"             "01"            "021"             "01"             "03" 
#> CGATCAGAGAGGGT-1 CGATCAGAGGTACT-1 CGATCAGATGTGAC-1 CGATCCACCGGGAA-1 CGATCCACTTCCAT-1 
#>             "01"             "01"            "022"             "03"             "04" 
#> CGCAAATGCTCGAA-1 CGCAACCTCCTTGC-1 CGCAACCTGGACGA-1 CGCACGGAGGACGA-1 CGCACGGATCTTTG-1 
#>             "01"             "01"             "01"             "04"             "01" 
#> CGCACTACAGAATG-1 CGCACTACAGCCAT-1 CGCACTACATTGGC-1 CGCACTACTCGCCT-1 CGCACTACTCGTGA-1 
#>             "01"             "01"             "01"             "04"             "01" 
#> CGCACTTGTCACGA-1 CGCAGGACAGATCC-1 CGCAGGACCTACTT-1 CGCAGGACTTGTCT-1 CGCAGGTGCACTGA-1 
#>            "021"             "01"             "01"            "022"             "01" 
#> CGCAGGTGCCATAG-1 CGCAGGTGGGAACG-1 CGCATAGATCACGA-1 CGCCATACTGCAAC-1 CGCCATTGAGAGGC-1 
#>            "022"             "01"            "021"             "01"             "01" 
#> CGCCATTGCTATGG-1 CGCCATTGGAGACG-1 CGCCATTGGAGCAG-1 CGCCATTGTACTGG-1 CGCCGAGAGCTTAG-1 
#>             "01"             "01"             "04"             "04"             "03" 
#> CGCCTAACGAATGA-1 CGCCTAACTGCTCC-1 CGCGAGACACAGCT-1 CGCGAGACAGGTCT-1 CGCGAGACGCTACA-1 
#>            "022"             "01"             "01"             "04"             "01" 
#> CGCGATCTCAGTCA-1 CGCGATCTGTTGAC-1 CGCGATCTTTCTTG-1 CGCGGATGGCCAAT-1 CGCTAAGAATGTCG-1 
#>            "021"            "021"             "04"             "01"             "01" 
#> CGCTAAGACAACTG-1 CGCTAAGACCCTTG-1 CGCTACTGAACAGA-1 CGCTACTGAGAACA-1 CGCTACTGTGAGCT-1 
#>             "01"             "01"            "022"             "01"             "01" 
#> CGCTACTGTTCCCG-1 CGCTCATGCATTTC-1 CGGAATTGGTTTGG-1 CGGAATTGTGGAGG-1 CGGACCGATGCGTA-1 
#>             "03"            "021"             "01"             "01"             "03" 
#> CGGACCGATGGGAG-1 CGGACTCTAAACAG-1 CGGACTCTCCAATG-1 CGGACTCTCCTCGT-1 CGGAGGCTATTCCT-1 
#>             "01"             "04"             "01"             "03"             "01" 
#> CGGAGGCTTGGATC-1 CGGATAACAACGAA-1 CGGATAACAGCTCA-1 CGGATAACTCAGTG-1 CGGCACGAACTCAG-1 
#>             "01"            "021"             "01"            "021"             "01" 
#> CGGCACGAAGGGTG-1 CGGCACGACTACGA-1 CGGCATCTTAGAAG-1 CGGCATCTTCGTAG-1 CGGCCAGAAAGGTA-1 
#>             "01"            "022"             "01"            "021"             "01" 
#> CGGCCAGAGAGGCA-1 CGGCGAACCAGTCA-1 CGGCGAACGACAAA-1 CGGCGAACGGTCTA-1 CGGCGAACTACTTC-1 
#>             "03"            "022"             "03"             "01"             "03" 
#> CGGGACTGCGTGTA-1 CGGGACTGGAATAG-1 CGGGCATGACCCAA-1 CGGGCATGTCTCTA-1 CGGGCATGTTGTGG-1 
#>             "01"             "03"             "03"             "03"             "01" 
#> CGGTAAACTCGCAA-1 CGGTCACTGTTTGG-1 CGGTCACTTACTTC-1 CGTAACGATCGCCT-1 CGTACCACACACAC-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> CGTACCACACGTTG-1 CGTACCACCTCATT-1 CGTACCACGGAGCA-1 CGTACCTGGCATCA-1 CGTAGCCTCTCTCG-1 
#>             "01"             "01"             "01"             "03"            "021" 
#> CGTAGCCTGCGAAG-1 CGTAGCCTGTATGC-1 CGTCAAGAAAGGTA-1 CGTCAAGAACGTGT-1 CGTCAAGACAGAGG-1 
#>             "01"            "022"            "021"             "01"             "01" 
#> CGTCAAGACAGGAG-1 CGTCCATGCTCTTA-1 CGTCGACTTTCCGC-1 CGTGATGACGCTAA-1 CGTGATGAGGTTCA-1 
#>             "03"             "01"             "01"             "01"             "01" 
#> CGTGCACTTATGGC-1 CGTGTAGAAAAACG-1 CGTGTAGACGATAC-1 CGTGTAGAGTTACG-1 CGTGTAGAGTTCAG-1 
#>            "022"             "01"             "03"             "03"            "021" 
#> CGTGTAGATTCGGA-1 CGTTAGGAAACCAC-1 CGTTAGGATCATTC-1 CGTTATACCCTGAA-1 CGTTTAACTGGTCA-1 
#>             "03"             "01"            "022"             "03"             "01" 
#> CTAAACCTCTGACA-1 CTAAACCTGTGCAT-1 CTAACACTAACGTC-1 CTAACACTAGTGCT-1 CTAACGGAACCGAT-1 
#>             "03"             "04"             "01"            "022"             "03" 
#> CTAACGGATTTCTG-1 CTAACTACGGCAAG-1 CTAAGGACACCATG-1 CTAAGGACCGTTAG-1 CTAAGGACGCCATA-1 
#>             "01"             "01"             "01"             "01"            "021" 
#> CTAAGGTGCCTAAG-1 CTAAGGTGTTGCAG-1 CTAAGGTGTTTCTG-1 CTAATAGAGCTATG-1 CTAATGCTTGTGGT-1 
#>             "04"             "01"             "01"             "01"            "021" 
#> CTACAACTCCCGTT-1 CTACCTCTCAACCA-1 CTACGCACACCTAG-1 CTACGCACTCTCCG-1 CTACGCACTGGTCA-1 
#>             "03"             "01"            "022"             "01"             "03" 
#> CTACGGCTTTCTTG-1 CTACTATGAACCAC-1 CTACTATGATGTGC-1 CTACTATGCTAAGC-1 CTACTATGTAAAGG-1 
#>            "022"            "021"            "021"             "01"             "04" 
#> CTACTCCTATGTCG-1 CTACTCCTGCCATA-1 CTAGAGACACTTTC-1 CTAGAGACAGCATC-1 CTAGAGACTTTGGG-1 
#>             "03"            "021"             "01"             "03"            "022" 
#> CTAGATCTCTCTAT-1 CTAGATCTTCGACA-1 CTAGGATGAGCCTA-1 CTAGGATGATCGTG-1 CTAGGCCTCTCAGA-1 
#>             "01"             "01"             "04"             "04"             "01" 
#> CTAGGTGATGGTTG-1 CTAGTTACCAGAGG-1 CTAGTTACCGCATA-1 CTAGTTACGAAACA-1 CTATAAGATCGTTT-1 
#>            "022"             "01"             "01"             "03"             "04" 
#> CTATACTGAGGTTC-1 CTATACTGCCAGTA-1 CTATACTGCGCTAA-1 CTATACTGCTACGA-1 CTATACTGTCTCAT-1 
#>            "021"             "01"            "021"             "03"             "03" 
#> CTATACTGTTCGTT-1 CTATAGCTGTCACA-1 CTATAGCTTCGCTC-1 CTATAGCTTGCCTC-1 CTATCAACGAACTC-1 
#>             "01"             "01"            "021"            "021"             "01" 
#> CTATCAACGCAGAG-1 CTATCAACTTTGGG-1 CTATCCCTCCACCT-1 CTATGTACGAGAGC-1 CTATGTACGCTTAG-1 
#>             "01"             "01"            "021"             "01"             "01" 
#> CTATGTACTGTTTC-1 CTATGTTGAAAGCA-1 CTATGTTGTCCTCG-1 CTATGTTGTCTCGC-1 CTATTGACAAACGA-1 
#>             "04"             "01"             "01"             "01"            "021" 
#> CTATTGACACTGGT-1 CTATTGACGGTGAG-1 CTATTGTGGCAAGG-1 CTCAATTGGTTCAG-1 CTCAATTGGTTGCA-1 
#>            "022"            "022"             "01"             "01"            "021" 
#> CTCAGAGATAGAAG-1 CTCAGCACTCTAGG-1 CTCAGCACTGAACC-1 CTCAGCACTTGCAG-1 CTCAGCTGAACCTG-1 
#>             "01"             "01"            "021"             "01"            "021" 
#> CTCAGCTGCAGTTG-1 CTCAGGCTCGTTGA-1 CTCAGGCTGCTAAC-1 CTCATTGACCTTAT-1 CTCATTGATGCTTT-1 
#>             "01"            "022"             "01"             "01"            "022" 
#> CTCCACGAGAGATA-1 CTCCATCTCTTAGG-1 CTCCATCTGACGAG-1 CTCCGAACAAGTGA-1 CTCCTACTGCCTTC-1 
#>            "022"             "01"             "01"            "022"            "021" 
#> CTCGAAGATGTGGT-1 CTCGAAGATTAGGC-1 CTCGACTGCTCTAT-1 CTCGACTGGGTGAG-1 CTCGACTGGTTGAC-1 
#>             "01"            "021"             "01"             "01"             "03" 
#> CTCGAGCTCTGGAT-1 CTCGCATGACTTTC-1 CTCGCATGCTTAGG-1 CTCTAAACCTCGAA-1 CTCTAAACGGCGAA-1 
#>             "03"             "01"             "01"             "01"             "01" 
#> CTCTAATGTCCAAG-1 CTGAACGACAGTCA-1 CTGAACGATGAGGG-1 CTGAAGACCCAACA-1 CTGAAGACGTGCAT-1 
#>            "021"             "01"             "01"             "01"             "04" 
#> CTGAAGTGAAGCCT-1 CTGAAGTGCAGCTA-1 CTGAAGTGGCTATG-1 CTGAAGTGTCCAGA-1 CTGAATCTGAATAG-1 
#>            "022"             "04"             "01"             "01"             "01" 
#> CTGACAGAATCGTG-1 CTGACCACAGCAAA-1 CTGAGAACCGGGAA-1 CTGAGAACGTAAAG-1 CTGATACTAGTAGA-1 
#>             "03"             "01"             "01"             "03"             "01" 
#> CTGATTTGGTGTTG-1 CTGCAGCTAACCGT-1 CTGCAGCTGACACT-1 CTGCAGCTGGATTC-1 CTGCAGCTTGGCAT-1 
#>            "022"             "01"             "01"            "022"             "01" 
#> CTGCCAACAGGAGC-1 CTGCCAACCAGCTA-1 CTGCCAACTAACCG-1 CTGCCAACTGCTCC-1 CTGCCAACTTGCAG-1 
#>             "01"             "01"            "021"             "03"             "01" 
#> CTGCCAACTTGCTT-1 CTGCGACTCCACCT-1 CTGGAAACAAACGA-1 CTGGAAACATCGAC-1 CTGGATGACTGGAT-1 
#>             "01"             "03"             "03"             "01"             "03" 
#> CTGGATGACTTGTT-1 CTGGATGATGTGAC-1 CTGGCACTCAAGCT-1 CTGTAACTAACCAC-1 CTGTAACTAGCGTT-1 
#>             "01"             "04"            "021"             "01"             "01" 
#> CTGTATACGTAAAG-1 CTGTATACGTACGT-1 CTGTATACGTTGGT-1 CTGTGAGACAACCA-1 CTGTGAGACCTTGC-1 
#>             "01"            "022"             "01"            "022"             "03" 
#> CTGTGAGACGAACT-1 CTGTGAGACTGTAG-1 CTTAAAGAACCTGA-1 CTTAACACCTGTAG-1 CTTAACACTATCGG-1 
#>            "021"            "021"             "01"             "01"             "04" 
#> CTTAAGCTACCTAG-1 CTTAAGCTAGTACC-1 CTTAAGCTCATCAG-1 CTTAAGCTCCGCTT-1 CTTACAACTAACGC-1 
#>             "01"             "01"             "01"             "04"             "01" 
#> CTTACAACTCCCGT-1 CTTACTGACGTACA-1 CTTAGACTAAACGA-1 CTTAGGGACTTGCC-1 CTTAGGGAGAATCC-1 
#>            "021"             "01"             "01"             "01"             "01" 
#> CTTATCGACTCATT-1 CTTCACCTACCTGA-1 CTTCATGAAGCATC-1 CTTCATGAAGTACC-1 CTTCATGACCGAAT-1 
#>             "01"            "022"             "04"             "01"             "01" 
#> CTTGAACTACGCAT-1 CTTGATTGAGGTTC-1 CTTGATTGATCTTC-1 CTTGATTGCATTCT-1 CTTGATTGTTTCGT-1 
#>             "01"             "03"            "021"             "01"             "01" 
#> CTTGTATGACACCA-1 CTTGTATGCGCAAT-1 CTTTACGAGCGAAG-1 CTTTAGACCGTGAT-1 CTTTAGACGAGACG-1 
#>             "04"             "04"             "01"             "01"             "01" 
#> CTTTAGACGATACC-1 CTTTAGACGTTGGT-1 CTTTAGACTCATTC-1 CTTTAGTGACGGGA-1 CTTTAGTGGGTGGA-1 
#>             "01"             "01"             "01"             "03"             "01" 
#> CTTTCAGAGAAACA-1 CTTTGATGAGCACT-1 CTTTGATGTCTAGG-1 CTTTGATGTGTCCC-1 CTTTGATGTGTGGT-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> GAAACAGAACTACG-1 GAAACAGAATCACG-1 GAAACAGACATTCT-1 GAAACCTGATCGTG-1 GAAACCTGATGCCA-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> GAAACCTGCTTATC-1 GAAACCTGGACTAC-1 GAAACCTGTGCTAG-1 GAAAGATGATTTCC-1 GAAAGATGCTGATG-1 
#>             "01"            "022"             "01"             "01"            "022" 
#> GAAAGATGCTTCGC-1 GAAAGATGTAAGGA-1 GAAAGCCTACGTTG-1 GAAAGTGAAAGTGA-1 GAAAGTGACCACAA-1 
#>            "021"             "01"             "04"            "022"            "021" 
#> GAAAGTGACTCAAG-1 GAAATACTACCAAC-1 GAAATACTCTTAGG-1 GAAATACTTCCTCG-1 GAACACACGTGCAT-1 
#>             "01"            "021"             "04"             "03"            "022" 
#> GAACACACTGCCTC-1 GAACAGCTAACTGC-1 GAACAGCTCTCAGA-1 GAACCAACCACAAC-1 GAACCAACTTCCGC-1 
#>             "01"            "022"            "022"             "01"             "03" 
#> GAACCTGAACGTGT-1 GAACCTGAGAGACG-1 GAACCTGATGAACC-1 GAACGGGATACTTC-1 GAACTGTGACCTGA-1 
#>             "01"             "01"             "01"             "01"            "022" 
#> GAACTGTGCCAGTA-1 GAAGAATGCAATCG-1 GAAGCGGACCTATT-1 GAAGCTACGAATGA-1 GAAGCTACGGTTTG-1 
#>            "021"             "01"            "022"            "022"             "03" 
#> GAAGGGTGAAAGTG-1 GAAGGGTGCTTAGG-1 GAAGGTCTGAAAGT-1 GAAGGTCTGTTGCA-1 GAAGGTCTTAAAGG-1 
#>             "01"            "021"             "03"             "01"            "022" 
#> GAAGTAGACTCCCA-1 GAAGTAGATCCAAG-1 GAAGTCACCCTCGT-1 GAAGTCACCCTGTC-1 GAAGTCTGTCGCAA-1 
#>             "03"            "022"            "021"             "04"             "04" 
#> GAAGTCTGTTCTGT-1 GAAGTGCTAAACGA-1 GAAGTGCTCCGCTT-1 GAAGTGCTTAACCG-1 GAATGCACCCTAAG-1 
#>             "01"             "03"            "022"             "01"             "01" 
#> GAATGCACCTTCGC-1 GAATGCTGCGGTAT-1 GAATTAACGATAAG-1 GAATTAACGGTCAT-1 GAATTAACGTCGTA-1 
#>             "03"             "01"             "01"             "01"             "03" 
#> GAATTAACTGAAGA-1 GACAACACAGGCGA-1 GACAACACATCGTG-1 GACAACACTCGCCT-1 GACAACTGAGGTTC-1 
#>             "04"             "01"             "01"             "01"             "01" 
#> GACAGGGAAGAGTA-1 GACAGGGAATGCCA-1 GACAGTACGAGCTT-1 GACAGTACTTCGGA-1 GACAGTTGAGTAGA-1 
#>             "04"             "01"            "022"            "022"             "04" 
#> GACATTCTCCACCT-1 GACCAAACGACTAC-1 GACCAAACGTATCG-1 GACCCTACTAAAGG-1 GACCTAGACCTCAC-1 
#>            "022"            "021"            "021"             "04"             "01" 
#> GACCTAGACGAGAG-1 GACCTCACAAGGTA-1 GACCTCACGTACGT-1 GACCTCTGCATCAG-1 GACGAACTCCCACT-1 
#>             "01"             "01"            "022"             "01"             "01" 
#> GACGATTGCCAATG-1 GACGCCGACCTTCG-1 GACGCTCTCTCTCG-1 GACGGCACACGGGA-1 GACGGCACGAGATA-1 
#>             "04"             "01"             "03"             "03"            "022" 
#> GACGTAACCTATGG-1 GACGTAACCTGTGA-1 GACGTAACTATGGC-1 GACGTATGTTGACG-1 GACGTATGTTTGCT-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> GACGTCCTACGGAG-1 GACGTCCTCTCAAG-1 GACGTCCTGATAAG-1 GACTACGATGGTCA-1 GACTCCTGCTCGCT-1 
#>             "01"            "021"             "04"             "04"             "01" 
#> GACTCCTGGGTTAC-1 GACTCCTGTTATCC-1 GACTCCTGTTGGTG-1 GACTGAACCAATCG-1 GACTGATGTGATGC-1 
#>             "01"             "01"            "021"            "021"             "01" 
#> GACTTTACATGCCA-1 GACTTTACGACAGG-1 GAGAAATGTTCTCA-1 GAGATAGAAAAAGC-1 GAGATCACGACAAA-1 
#>             "01"             "04"             "04"            "022"            "022" 
#> GAGATGCTCTGGAT-1 GAGATGCTGAATGA-1 GAGCAGGATTCCCG-1 GAGCATACTTTGCT-1 GAGCGCACGCGTAT-1 
#>             "03"             "01"             "03"            "022"            "021" 
#> GAGCGCACGGTGAG-1 GAGCGCTGAAGATG-1 GAGCGCTGTCTTAC-1 GAGCGGCTGGGAGT-1 GAGGACGACTCAGA-1 
#>             "01"             "03"            "021"             "04"             "01" 
#> GAGGATCTGAAAGT-1 GAGGCAGACTTGCC-1 GAGGGAACACCAGT-1 GAGGGAACGAGGGT-1 GAGGGATGGGAAAT-1 
#>             "04"             "03"             "01"             "01"             "01" 
#> GAGGGCCTTCACCC-1 GAGGGTGAAGAGTA-1 GAGGTACTACGGTT-1 GAGGTACTACTCAG-1 GAGGTACTGACACT-1 
#>             "01"             "01"             "01"            "021"             "03" 
#> GAGGTACTGGGAGT-1 GAGGTACTTAGCGT-1 GAGGTGGAGTACGT-1 GAGGTGGATCCTCG-1 GAGGTTACTCGTTT-1 
#>             "01"            "022"             "01"             "03"            "022" 
#> GAGGTTTGTAAGCC-1 GAGTCAACCATTCT-1 GAGTCAACGGGAGT-1 GAGTCTGATCGTGA-1 GAGTCTGATTTGGG-1 
#>            "021"             "01"             "01"             "01"             "04" 
#> GAGTGACTCAGCTA-1 GAGTGACTCGGTAT-1 GAGTGACTCTTGCC-1 GAGTGACTGACTAC-1 GAGTGACTGTCTAG-1 
#>             "03"             "03"             "04"             "04"             "01" 
#> GAGTGGGAGTCTTT-1 GAGTGGGATGCCCT-1 GAGTGGGATGCTGA-1 GAGTGTTGCTGTAG-1 GAGTGTTGTGGTCA-1 
#>             "04"             "01"             "04"             "01"             "01" 
#> GAGTTGTGCATGGT-1 GAGTTGTGCTGAGT-1 GAGTTGTGGCGAGA-1 GAGTTGTGGTAGCT-1 GAGTTGTGTATGCG-1 
#>            "021"             "03"            "021"             "03"            "022" 
#> GATAAGGAGAAACA-1 GATAAGGATTCACT-1 GATACTCTATCGGT-1 GATACTCTTACTTC-1 GATACTCTTGACTG-1 
#>            "021"            "021"             "01"             "01"            "021" 
#> GATAGAGAAGGGTG-1 GATAGAGACTGTGA-1 GATAGAGATCACGA-1 GATAGCACCCATAG-1 GATAGCACGAAGGC-1 
#>             "03"             "01"            "021"             "01"            "022" 
#> GATAGCACTTGTCT-1 GATATAACAAGGTA-1 GATATAACACGCAT-1 GATATATGCTGGAT-1 GATATATGTCCGTC-1 
#>             "01"             "01"             "01"             "01"             "03" 
#> GATATATGTGGAGG-1 GATATCCTAGAAGT-1 GATATCCTCCCGTT-1 GATATTGACAGGAG-1 GATATTGACGAGTT-1 
#>            "021"             "01"            "021"             "03"            "022" 
#> GATATTGAGCCAAT-1 GATCCCTGACCTTT-1 GATCCCTGTGTAGC-1 GATCCGCTGGTCAT-1 GATCGAACCGAGAG-1 
#>             "01"             "03"             "03"            "021"             "01" 
#> GATCGATGACTAGC-1 GATCGATGGTAAAG-1 GATCGATGTAAGGA-1 GATCGTGACACTAG-1 GATCGTGATTCACT-1 
#>             "04"             "04"            "021"             "01"             "01" 
#> GATCTACTGGTGAG-1 GATCTACTTTGCAG-1 GATCTTACACCCAA-1 GATCTTACCCTACC-1 GATCTTACGAATAG-1 
#>             "01"             "04"            "022"             "01"            "021" 
#> GATCTTACGAGATA-1 GATGCAACTCCAGA-1 GATGCCCTACGTAC-1 GATGCCCTCTCATT-1 GATGCCCTGGCAAG-1 
#>            "021"             "01"             "01"             "01"            "021" 
#> GATGCCCTTTTGCT-1 GATTACCTTGTTCT-1 GATTCGGAACGACT-1 GATTCGGACAGGAG-1 GATTCGGAGAAGGC-1 
#>             "01"             "01"             "01"            "022"            "022" 
#> GATTCTTGATTCGG-1 GATTCTTGCCGATA-1 GATTCTTGCGAGTT-1 GATTGGACCCGTTC-1 GATTGGACGGTGTT-1 
#>            "022"             "01"             "04"             "04"             "04" 
#> GATTGGACTTTCGT-1 GATTGGTGTGTCAG-1 GATTTAGACACTCC-1 GATTTAGACTAAGC-1 GATTTAGATTCGTT-1 
#>             "04"             "01"            "022"             "04"            "021" 
#> GATTTGCTAACGAA-1 GATTTGCTAACGGG-1 GCAACCCTCCTCGT-1 GCAACTGATTGCGA-1 GCAAGACTACTGGT-1 
#>             "01"            "021"            "021"             "01"             "01" 
#> GCAAGACTAGGTCT-1 GCAAGACTCCCTTG-1 GCAATCGACTGCAA-1 GCAATCGAGACGTT-1 GCAATCGATCCTTA-1 
#>             "01"             "01"             "01"            "022"            "021" 
#> GCAATTCTCGTGTA-1 GCAATTCTTCTCCG-1 GCACAAACAATGCC-1 GCACAAACGGTACT-1 GCACAATGGTGCAT-1 
#>             "01"             "01"             "01"             "01"            "021" 
#> GCACACCTGTGCTA-1 GCACCACTCATGAC-1 GCACCACTGTTTGG-1 GCACCACTTCCTTA-1 GCACCACTTTCGGA-1 
#>             "03"            "021"            "021"             "03"            "021" 
#> GCACCTACGCGATT-1 GCACCTTGGCTGTA-1 GCACCTTGGGGAGT-1 GCACGGACCAGCTA-1 GCACGGTGACCTCC-1 
#>             "01"             "01"            "022"             "01"             "01" 
#> GCACGGTGCTATGG-1 GCACTAGAACGGGA-1 GCACTAGAAGATGA-1 GCACTAGACCTTTA-1 GCACTAGACGTAAC-1 
#>            "022"             "01"             "04"            "022"             "04" 
#> GCACTAGAGTCGTA-1 GCACTAGATGCAAC-1 GCACTGCTGAGGCA-1 GCAGATACAGCGTT-1 GCAGATACGACGGA-1 
#>             "03"             "01"             "01"             "01"             "01" 
#> GCAGATACGCAGAG-1 GCAGCCGACAGTCA-1 GCAGCGTGCACTCC-1 GCAGCTCTCAATCG-1 GCAGCTCTGTTTCT-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> GCAGGGCTAAGAAC-1 GCAGGGCTAAGGGC-1 GCAGGGCTATCGAC-1 GCAGGGCTTGGGAG-1 GCAGTCCTAACTGC-1 
#>             "01"             "01"             "03"             "03"             "01" 
#> GCAGTCCTCTCTTA-1 GCATCAGATGCGTA-1 GCATGTGACAAGCT-1 GCATTGGAGAAGGC-1 GCCAAAACGAGGCA-1 
#>             "01"             "01"             "01"             "01"             "03" 
#> GCCAAATGATCGAC-1 GCCAACCTACGGTT-1 GCCAACCTCGCCTT-1 GCCACGGAGGCGAA-1 GCCACGGATACTGG-1 
#>             "01"             "01"             "01"            "021"             "01" 
#> GCCACTACGTCTTT-1 GCCCAACTACCGAT-1 GCCCAACTATGGTC-1 GCCCATACAGCGTT-1 GCCGACGAACTCTT-1 
#>             "01"             "01"             "03"             "03"            "022" 
#> GCCGAGTGCGTTGA-1 GCCGGAACGAACTC-1 GCCGGAACGTTCTT-1 GCCGGAACTGCACA-1 GCCGGAACTTACTC-1 
#>             "01"             "03"             "03"             "03"             "01" 
#> GCCGTACTACCTGA-1 GCCGTACTGGCAAG-1 GCCTACACAGTTCG-1 GCCTACACCACTGA-1 GCCTACACCTTGAG-1 
#>             "01"            "021"             "03"            "022"             "01" 
#> GCCTAGCTACGGAG-1 GCCTAGCTCTATTC-1 GCCTAGCTTCTCAT-1 GCCTAGCTTCTCTA-1 GCCTCAACCATGGT-1 
#>             "04"             "01"             "01"            "022"             "01" 
#> GCCTCAACTCTTTG-1 GCCTCATGTCTTAC-1 GCCTGACTCTCAAG-1 GCGAAGGAACTCTT-1 GCGAAGGATGCCAA-1 
#>             "03"             "01"            "021"             "01"             "01" 
#> GCGAGAGAGGGACA-1 GCGAGCACTGTCGA-1 GCGAGCACTTGACG-1 GCGAGCACTTGCTT-1 GCGATATGGTACGT-1 
#>             "01"             "04"             "01"            "021"             "01" 
#> GCGATATGGTGTTG-1 GCGCACGAAGTCGT-1 GCGCACGACTTTAC-1 GCGCATCTAGGTCT-1 GCGCATCTGGTTAC-1 
#>             "01"             "01"            "021"             "01"             "01" 
#> GCGCATCTTCGATG-1 GCGCATCTTGCTCC-1 GCGCATCTTTCTAC-1 GCGCGAACGTTCTT-1 GCGCGATGAACGGG-1 
#>             "01"             "03"             "01"             "04"             "01" 
#> GCGCGATGGTGCAT-1 GCGGAGCTCCTGAA-1 GCGGCAACCCGATA-1 GCGGCAACGGAGGT-1 GCGGCAACTGTCGA-1 
#>             "03"             "01"             "01"             "04"            "021" 
#> GCGTAAACACGGTT-1 GCGTAATGCACCAA-1 GCGTATGAACACCA-1 GCGTATGATGAGAA-1 GCTACAGAAAGGTA-1 
#>            "022"            "022"             "01"            "022"             "01" 
#> GCTACAGAATCTTC-1 GCTACCTGAGAAGT-1 GCTACCTGATCACG-1 GCTACGCTAGAATG-1 GCTACGCTAGCTAC-1 
#>             "04"            "021"             "01"             "01"             "01" 
#> GCTACGCTCCCTAC-1 GCTAGAACAGAGGC-1 GCTAGAACGGATCT-1 GCTAGAACTCCCGT-1 GCTAGATGAGCTCA-1 
#>             "01"             "04"             "01"             "01"            "021" 
#> GCTAGATGGCGATT-1 GCTATACTAAGGCG-1 GCTATACTAGCGTT-1 GCTATACTCTCTTA-1 GCTATACTGGACGA-1 
#>             "03"             "01"             "03"             "01"             "01" 
#> GCTCAAGAACCATG-1 GCTCAAGAAGTCAC-1 GCTCAGCTGTCTAG-1 GCTCCATGAGAAGT-1 GCTCCATGCCGAAT-1 
#>            "022"            "022"             "01"             "03"             "01" 
#> GCTCGACTCTAGTG-1 GCTGATGAGGTATC-1 GCTTAACTACAGTC-1 GCTTAACTACTGGT-1 GCTTAACTGCTGAT-1 
#>            "021"            "021"            "021"             "03"             "01" 
#> GCTTAACTTAGACC-1 GCTTAACTTCAGTG-1 GGAACACTCACTTT-1 GGAACACTTCAGAC-1 GGAACTACTACTTC-1 
#>            "021"             "01"            "021"             "03"             "01" 
#> GGAACTTGAAGGTA-1 GGAACTTGAGAATG-1 GGAACTTGCTCCAC-1 GGAACTTGGGTAGG-1 GGAAGGACATCGGT-1 
#>            "022"             "01"            "021"             "04"            "021" 
#> GGAAGGACCACTAG-1 GGAAGGACGAGGGT-1 GGAAGGACGCGAAG-1 GGAAGGTGGCGAGA-1 GGAATCTGAAGGGC-1 
#>             "01"             "01"             "01"             "03"             "01" 
#> GGAATCTGAGGAGC-1 GGAATCTGCTTAGG-1 GGAATCTGCTTGTT-1 GGAATCTGGGAGGT-1 GGAATGCTTTCTAC-1 
#>             "01"             "04"            "021"             "01"             "01" 
#> GGACAGGAAAGGGC-1 GGACAGGAGTGCTA-1 GGACAGGATCTCGC-1 GGACCCGAAGCTAC-1 GGACCGTGCTTACT-1 
#>             "01"             "04"             "01"            "022"            "021" 
#> GGACCGTGGGAACG-1 GGACCGTGTAACGC-1 GGACCTCTGTAAGA-1 GGACCTCTTTTCTG-1 GGACGAGAGTGTCA-1 
#>            "022"             "01"            "021"             "03"            "021" 
#> GGACGCTGACGCAT-1 GGACGCTGCTAGCA-1 GGACGCTGTCCTCG-1 GGAGAGACGTGAGG-1 GGAGCAGATTCAGG-1 
#>             "01"             "01"             "03"             "01"             "04" 
#> GGAGCCACCTTCTA-1 GGAGCGCTACGCAT-1 GGAGCGCTCCGAAT-1 GGAGGATGCCACCT-1 GGAGGATGGTTGAC-1 
#>             "04"            "022"             "01"             "01"            "021" 
#> GGAGGATGTCAGTG-1 GGAGGCCTCGTTGA-1 GGAGGCCTTTCTTG-1 GGAGGTGATACGCA-1 GGAGGTGATCGCTC-1 
#>            "021"             "03"             "01"             "01"             "01" 
#> GGATACTGCAGCTA-1 GGATACTGTCTAGG-1 GGATAGCTCGTCTC-1 GGATAGCTCTGAAC-1 GGATGTACCAAAGA-1 
#>             "01"             "01"             "01"             "01"             "04" 
#> GGATGTACGCGAAG-1 GGATGTACGTCTTT-1 GGATGTACGTGTCA-1 GGATTTCTAGGTTC-1 GGATTTCTTTGTCT-1 
#>             "01"            "021"             "03"             "01"            "022" 
#> GGCAAGGAAAAAGC-1 GGCAAGGAAGAAGT-1 GGCAAGGACTTGGA-1 GGCAAGGAGGACTT-1 GGCAATACGCTAAC-1 
#>             "03"             "01"            "021"             "01"             "04" 
#> GGCAATACGGCATT-1 GGCAATACGTTTCT-1 GGCACGTGGCTTAG-1 GGCACTCTTTTGTC-1 GGCATATGCTTATC-1 
#>             "01"             "04"            "022"             "01"             "03" 
#> GGCATATGGGGAGT-1 GGCATATGTGTGAC-1 GGCCACGACAGAGG-1 GGCCAGACTGGTTG-1 GGCCCAGAAAGTAG-1 
#>             "03"             "01"             "01"             "01"            "021" 
#> GGCCGAACAACGAA-1 GGCCGAACGCAGAG-1 GGCCGAACGTAGGG-1 GGCCGAACTCTAGG-1 GGCCGATGCAGGAG-1 
#>             "01"             "01"             "01"             "03"             "01" 
#> GGCCGATGCCGAAT-1 GGCCGATGTACTCT-1 GGCGACACTGCCCT-1 GGCGACTGCGTAAC-1 GGCGCATGCCTAAG-1 
#>             "01"             "01"             "03"             "01"            "022" 
#> GGCGCATGCTCCAC-1 GGCGCATGTGGAAA-1 GGCGGACTAGAGGC-1 GGCGGACTAGGAGC-1 GGCGGACTCTGACA-1 
#>             "01"             "01"             "01"             "03"             "01" 
#> GGCGGACTCTTGGA-1 GGCGGACTTACTGG-1 GGCGGACTTGAACC-1 GGCTAAACACCTGA-1 GGCTAAACTCTTAC-1 
#>             "03"             "01"             "01"             "03"             "01" 
#> GGCTAATGAGCACT-1 GGCTAATGGTCTAG-1 GGCTCACTACTCAG-1 GGGAACGAAGCTCA-1 GGGAACGACACAAC-1 
#>             "03"             "01"            "021"            "022"             "04" 
#> GGGAACGAGTGTCA-1 GGGAAGTGTTGAGC-1 GGGACCACACGTTG-1 GGGACCACAGAACA-1 GGGACCACGAATAG-1 
#>            "021"            "021"             "03"             "01"             "01" 
#> GGGACCACGTCATG-1 GGGACCACTCAAGC-1 GGGACCACTCGTGA-1 GGGACCACTGCATG-1 GGGACCTGACCCTC-1 
#>             "01"             "01"             "01"             "01"            "021" 
#> GGGACCTGCTTGCC-1 GGGACCTGTGGAGG-1 GGGATGGACGACAT-1 GGGATGGATACTTC-1 GGGATGGATGGTTG-1 
#>             "01"             "04"             "04"             "01"            "021" 
#> GGGATTACGTCTAG-1 GGGCAAGATGCATG-1 GGGCACACGGTGAG-1 GGGCACACGTTGCA-1 GGGCAGCTTGGGAG-1 
#>             "01"            "021"            "022"             "01"             "01" 
#> GGGCAGCTTTTCTG-1 GGGCCAACCTTGGA-1 GGGCCAACGCGTTA-1 GGGCCAACTACGCA-1 GGGCCAACTCCAAG-1 
#>             "01"            "022"             "04"            "021"             "04" 
#> GGGCCATGATGGTC-1 GGGCCATGTTGACG-1 GGGTAACTCAGCTA-1 GGGTAACTCTAGTG-1 GGGTAACTCTGGAT-1 
#>             "01"             "01"             "01"             "04"             "01" 
#> GGGTTAACGTGCAT-1 GGTAAAGAGCTAAC-1 GGTACAACTGCAAC-1 GGTACATGAAAGCA-1 GGTACATGAGCTCA-1 
#>             "03"             "03"             "01"             "04"             "01" 
#> GGTACATGCGGTAT-1 GGTACATGGTTACG-1 GGTACATGTGGGAG-1 GGTACTGAACTCTT-1 GGTAGTACACCACA-1 
#>             "01"             "01"             "01"            "021"             "01" 
#> GGTAGTACACTAGC-1 GGTAGTACCCTGTC-1 GGTAGTACGCCATA-1 GGTAGTACTGTCTT-1 GGTATCGAGACAAA-1 
#>            "021"             "01"            "021"             "01"            "021" 
#> GGTATCGATGAACC-1 GGTCAAACCAAAGA-1 GGTCTAGAGAAACA-1 GGTCTAGATAGCGT-1 GGTGATACCGACTA-1 
#>             "04"             "01"            "021"            "022"             "04" 
#> GGTGATACGACTAC-1 GGTGATACTGTTTC-1 GGTGGAGAAACGGG-1 GGTGGAGAAGTAGA-1 GGTGGAGACAGATC-1 
#>            "021"             "01"             "03"             "01"             "03" 
#> GGTGGAGATCGATG-1 GGTGGAGATCTCTA-1 GGTGGAGATTACTC-1 GGTTTACTACGCAT-1 GTAACGTGACCTCC-1 
#>             "01"            "021"             "03"             "03"            "022" 
#> GTAACGTGATCGGT-1 GTAACGTGCAGCTA-1 GTAACGTGGTTGAC-1 GTAAGCACAACGGG-1 GTAAGCACTCATTC-1 
#>             "04"             "04"             "04"             "01"             "04" 
#> GTAAGCTGGTACCA-1 GTAATAACCTTCTA-1 GTAATAACGTTGTG-1 GTACCCTGACAGTC-1 GTACCCTGGAGCTT-1 
#>            "021"            "021"             "01"            "022"             "01" 
#> GTACCCTGTCCTTA-1 GTACCCTGTGAACC-1 GTACGTGAACGTTG-1 GTACTTTGTCGACA-1 GTAGACTGAGATGA-1 
#>             "03"             "01"             "03"             "01"            "021" 
#> GTAGACTGTATTCC-1 GTAGCAACAGTCGT-1 GTAGCAACCATTTC-1 GTAGCAACGGTAGG-1 GTAGCATGCACTCC-1 
#>             "01"            "021"             "04"            "021"             "04" 
#> GTAGCATGTAAGCC-1 GTAGCCCTGACGTT-1 GTAGCTGAAGCTAC-1 GTAGCTGAATTCGG-1 GTAGGTACACGGGA-1 
#>            "021"             "01"            "022"             "01"            "021" 
#> GTAGTGACCTCATT-1 GTAGTGTGAGCGGA-1 GTAGTGTGAGGCGA-1 GTAGTGTGTGGTTG-1 GTATCACTGGTAGG-1 
#>             "01"             "03"            "021"             "01"            "021" 
#> GTATCTACAGAAGT-1 GTATCTACGACGAG-1 GTATCTACGTTACG-1 GTATTAGAAACAGA-1 GTATTAGAGGTCTA-1 
#>             "03"             "03"             "01"             "03"             "01" 
#> GTATTCACACAGCT-1 GTATTCACGGGTGA-1 GTCAACGACACTGA-1 GTCAACGAGTGTAC-1 GTCAATCTACACCA-1 
#>             "01"             "03"             "01"            "021"             "01" 
#> GTCAATCTGTAGCT-1 GTCAATCTTGTGGT-1 GTCACCTGCCTCCA-1 GTCACCTGTCCCGT-1 GTCATACTAATCGC-1 
#>             "03"             "01"             "01"             "01"             "04" 
#> GTCATACTGCGATT-1 GTCATACTTCGCCT-1 GTCATACTTTACCT-1 GTCATACTTTGACG-1 GTCCAAGAAAAACG-1 
#>             "03"             "03"             "03"             "01"             "01" 
#> GTCCACTGACCTCC-1 GTCCACTGGGTACT-1 GTCCAGCTACGGGA-1 GTCCCATGTGGTGT-1 GTCGAATGAAGGCG-1 
#>             "01"            "022"             "01"            "022"            "022" 
#> GTCGACCTGAATGA-1 GTCGACCTGTTCAG-1 GTCGCACTTGAGAA-1 GTCTAACTGGTCTA-1 GTCTAGGAGCTTCC-1 
#>             "03"             "01"             "04"            "022"            "021" 
#> GTGAACACACTCTT-1 GTGAACACTCAGGT-1 GTGACCCTTAAGCC-1 GTGATGACAAGTGA-1 GTGATGACCTGAGT-1 
#>             "01"             "01"             "01"             "01"             "04" 
#> GTGATGACGGTTTG-1 GTGATTCTCATTTC-1 GTGATTCTCTCTCG-1 GTGATTCTGGTTCA-1 GTGATTCTGTCGAT-1 
#>             "01"             "01"            "021"             "03"             "01" 
#> GTGATTCTTAGCGT-1 GTGCCACTCAGGAG-1 GTGGATTGCACTAG-1 GTGGATTGCGGAGA-1 GTGGATTGTAACGC-1 
#>             "04"             "01"            "022"             "01"             "01" 
#> GTGTACGATCAGTG-1 GTGTAGTGGGTACT-1 GTGTATCTAGCCTA-1 GTGTATCTAGTAGA-1 GTGTATCTGTTACG-1 
#>             "01"             "01"             "04"             "03"             "04" 
#> GTGTCAGAAGCGTT-1 GTTAAAACCGAGAG-1 GTTAAATGCTCGAA-1 GTTAAATGTCGACA-1 GTTAACCTAGCTAC-1 
#>             "03"             "03"             "01"             "04"             "01" 
#> GTTAACCTTGCTTT-1 GTTAGGTGCACTCC-1 GTTAGGTGCCAGTA-1 GTTAGGTGCCCAAA-1 GTTAGGTGGAACTC-1 
#>            "022"             "01"            "022"            "022"             "04" 
#> GTTAGTCTAAGAAC-1 GTTATAGAGGACAG-1 GTTATGCTTTCATC-1 GTTCAACTGGGACA-1 GTTCAACTTATGCG-1 
#>             "01"             "01"             "01"             "03"             "01" 
#> GTTGACGAGCCCTT-1 GTTGACGATATCGG-1 GTTGAGTGGTCTTT-1 GTTGAGTGTGCTTT-1 GTTGATCTGGGACA-1 
#>             "03"             "03"            "022"             "01"             "01" 
#> GTTGATCTTTTCAC-1 GTTGGATGTTTACC-1 GTTGTACTATTCCT-1 GTTGTACTTTTGGG-1 GTTTAAGACCATGA-1 
#>             "03"            "022"            "022"             "01"            "021" 
#> GTTTAAGACTGTCC-1 TAAACAACCAACCA-1 TAAACAACGAATCC-1 TAAAGACTCAGGAG-1 TAAATCGATGAGGG-1 
#>             "03"             "01"             "04"             "01"             "01" 
#> TAACAATGTGCCCT-1 TAACACCTTCGCTC-1 TAACACCTTCGTAG-1 TAACACCTTGTTTC-1 TAACATGACACTAG-1 
#>             "04"            "021"            "022"             "03"             "04" 
#> TAACCGGACTTACT-1 TAACGTCTCAACCA-1 TAACGTCTCATTGG-1 TAACTAGAATTTCC-1 TAACTAGACTTAGG-1 
#>             "01"            "021"             "01"             "01"             "01" 
#> TAACTAGATCTGGA-1 TAACTCACGAGGAC-1 TAACTCACGTACAC-1 TAACTCACGTATCG-1 TAACTCACTCTACT-1 
#>             "01"            "021"             "04"            "021"             "03" 
#> TAAGAACTGTGTCA-1 TAAGAGGACTAAGC-1 TAAGAGGACTTGTT-1 TAAGATACGGTTCA-1 TAAGATTGCGTAGT-1 
#>            "021"             "04"             "03"            "021"             "01" 
#> TAAGATTGTTGCTT-1 TAAGCGTGAGGTTC-1 TAAGCGTGGACAAA-1 TAAGCGTGGGAAAT-1 TAAGCGTGTGCTCC-1 
#>             "01"            "021"            "022"             "01"            "022" 
#> TAAGGCTGCCATGA-1 TAAGGCTGCTGCTC-1 TAAGGCTGTCTCGC-1 TAAGGGCTGCTGTA-1 TAAGGGCTTTACTC-1 
#>             "01"             "01"            "022"             "03"             "01" 
#> TAAGTAACCGAGAG-1 TAAGTAACCTCCAC-1 TAAGTAACCTGTAG-1 TAAGTAACTTGTCT-1 TAATGATGAGCGGA-1 
#>             "04"             "04"             "01"             "01"             "01" 
#> TAATGCCTCATGAC-1 TAATGCCTCGTCTC-1 TAATGTGAAGATGA-1 TAATGTGACTGCAA-1 TAATGTGATTACTC-1 
#>             "01"             "03"             "01"            "022"             "01" 
#> TACAAATGGGTACT-1 TACAATGAAAACAG-1 TACAATGACTTAGG-1 TACAATGATGCTAG-1 TACACACTCACACA-1 
#>             "01"            "021"             "01"             "01"             "01" 
#> TACACACTCTTACT-1 TACATAGAACGCAT-1 TACATCACACGGGA-1 TACATCACCTGTTT-1 TACATCACGCTAAC-1 
#>             "01"             "01"             "01"            "022"             "04" 
#> TACATCACTGAACC-1 TACCATTGAGGTTC-1 TACCATTGCGGGAA-1 TACCATTGGGGATG-1 TACCATTGTGAGGG-1 
#>            "022"             "01"            "021"            "021"            "021" 
#> TACCGGCTGTTGGT-1 TACGAGTGATCTCT-1 TACGAGTGATGCTG-1 TACGAGTGCGGAGA-1 TACGAGTGGTTGGT-1 
#>             "01"             "01"            "022"             "01"             "01" 
#> TACGATCTAGTGTC-1 TACGATCTCACTGA-1 TACGATCTTACGAC-1 TACGCAGAGAATCC-1 TACGCCACATTCCT-1 
#>             "01"            "022"             "03"             "03"             "01" 
#> TACGCCACTCCCAC-1 TACGCCACTCCGAA-1 TACGGAACGCGTTA-1 TACGGCCTGGGACA-1 TACGTACTACGGAG-1 
#>            "022"             "04"             "04"             "03"             "01" 
#> TACGTACTCAGTTG-1 TACGTACTCCCGTT-1 TACGTTACAGAAGT-1 TACGTTACCAAGCT-1 TACTAAGAAAGGTA-1 
#>             "01"             "04"             "01"            "021"             "04" 
#> TACTAAGAATCACG-1 TACTAAGATGATGC-1 TACTAAGATTGCGA-1 TACTACACGAGAGC-1 TACTACACTTACCT-1 
#>             "01"            "021"             "01"             "01"             "04" 
#> TACTACTGAACCTG-1 TACTACTGATGTCG-1 TACTACTGATTCTC-1 TACTACTGTATGGC-1 TACTCAACGGTCTA-1 
#>            "021"             "03"             "01"             "01"            "021" 
#> TACTCAACTGCTAG-1 TACTCCCTCAGTTG-1 TACTCTGAATCGAC-1 TACTCTGACGAGTT-1 TACTCTGATTGACG-1 
#>             "04"             "01"             "03"             "01"             "04" 
#> TACTGGGATCGATG-1 TACTGTTGAAAGCA-1 TACTGTTGAGGCGA-1 TACTGTTGCTGAAC-1 TACTTGACTCCTCG-1 
#>             "01"             "01"             "03"             "04"             "03" 
#> TACTTGACTGGTGT-1 TACTTTCTTTTGGG-1 TAGAAACTAATCGC-1 TAGAAACTGCTTCC-1 TAGAAACTGGGATG-1 
#>             "04"             "01"             "01"            "021"             "03" 
#> TAGAATTGCGACAT-1 TAGAATTGTATCGG-1 TAGACGTGCTTGAG-1 TAGACGTGTCGCTC-1 TAGAGCACCTTACT-1 
#>             "01"             "01"             "01"             "01"             "04" 
#> TAGATTGACTTGTT-1 TAGATTGAGGCATT-1 TAGCATCTCAGCTA-1 TAGCATCTCCCTCA-1 TAGCATCTGCTGTA-1 
#>             "04"             "01"             "03"             "01"            "022" 
#> TAGCATCTGGGACA-1 TAGCATCTTGTCGA-1 TAGCCCACAAAAGC-1 TAGCCCACAGCCAT-1 TAGCCCACAGCTAC-1 
#>             "01"             "01"             "01"             "03"             "03" 
#> TAGCCCACCCACAA-1 TAGCCCTGCGGAGA-1 TAGCCGCTTACGAC-1 TAGCCGCTTACTTC-1 TAGCCGCTTTCCAT-1 
#>             "01"             "01"             "01"             "03"            "022" 
#> TAGCTACTGAATAG-1 TAGCTACTGTAGCT-1 TAGCTACTTTTGCT-1 TAGGACTGTGCTGA-1 TAGGAGCTAAGGCG-1 
#>             "04"             "01"             "01"             "01"             "04" 
#> TAGGAGCTGAGGGT-1 TAGGAGCTTGCATG-1 TAGGCAACCGTCTC-1 TAGGCATGCTCTCG-1 TAGGCATGGCGAGA-1 
#>             "01"             "04"             "04"             "03"             "03" 
#> TAGGCTGATGCCTC-1 TAGGGACTGAACTC-1 TAGGTCGACACTGA-1 TAGGTCGAGGATCT-1 TAGGTGACACACTG-1 
#>            "021"             "03"             "01"             "04"             "01" 
#> TAGGTGACACGTTG-1 TAGGTGTGTTCTGT-1 TAGGTTCTGAAGGC-1 TAGGTTCTTCTTAC-1 TAGGTTCTTGCTGA-1 
#>             "04"             "03"             "01"            "022"            "021" 
#> TAGTAAACCTCGCT-1 TAGTAAACGTCACA-1 TAGTAATGAGATCC-1 TAGTACCTAAGAAC-1 TAGTATGATCTTAC-1 
#>             "01"             "01"             "01"            "021"             "04" 
#> TAGTATGATTCTCA-1 TAGTCTTGGCTGTA-1 TAGTCTTGGGACTT-1 TAGTCTTGTGGAAA-1 TAGTGGTGAAGTGA-1 
#>             "01"             "01"             "01"             "03"             "03" 
#> TAGTTAGAACCACA-1 TAGTTAGATGAACC-1 TATAAGACAACAGA-1 TATAAGACAGCTCA-1 TATAAGTGACACCA-1 
#>             "03"             "01"             "01"            "022"            "022" 
#> TATAAGTGTATCGG-1 TATAAGTGTGGTGT-1 TATACAGAACCCTC-1 TATACAGAAGAACA-1 TATACAGATCCAGA-1 
#>            "021"            "022"             "01"             "01"             "01" 
#> TATACCACCTGATG-1 TATACGCTACCAAC-1 TATAGATGGACGGA-1 TATAGATGTTCCGC-1 TATCCAACCAGCTA-1 
#>             "04"             "01"             "01"            "022"            "021" 
#> TATCCAACTCTCTA-1 TATCGACTACTAGC-1 TATCGACTCGATAC-1 TATCGTACAGATGA-1 TATCGTACATTCCT-1 
#>             "03"             "01"            "022"             "01"            "021" 
#> TATCTCGAGAGATA-1 TATCTGACAGGTTC-1 TATCTGACTGTTTC-1 TATCTTCTAAACAG-1 TATGAATGGAGGAC-1 
#>             "01"             "03"             "01"             "01"             "03" 
#> TATGAATGTTTGCT-1 TATGCGGATAACCG-1 TATGGGTGCATCAG-1 TATGGGTGCTAGCA-1 TATGGTCTCTACCC-1 
#>            "022"             "01"             "03"             "04"             "01" 
#> TATGTCACGGAACG-1 TATGTCACTAACCG-1 TATGTCACTTCTCA-1 TATGTGCTCCGATA-1 TATGTGCTGGATTC-1 
#>             "04"            "022"             "04"            "021"             "01" 
#> TATTGCTGAAGAAC-1 TATTGCTGCCGTTC-1 TATTGCTGTCTGGA-1 TATTGCTGTGCACA-1 TATTTCCTATTGGC-1 
#>            "021"             "04"             "01"             "01"            "021" 
#> TATTTCCTGGAGGT-1 TATTTCCTGGTGTT-1 TCAACACTGTTTGG-1 TCAAGGACAGCGTT-1 TCAAGGACATTCTC-1 
#>             "03"             "01"             "03"             "01"             "03" 
#> TCAAGGACGGTGTT-1 TCAATCACACTCTT-1 TCAATCACAGTCGT-1 TCACAACTATGTGC-1 TCACAACTTTGCTT-1 
#>            "021"             "03"            "022"             "01"            "021" 
#> TCACATACACTTTC-1 TCACATACAGGGTG-1 TCACCCGAGACGGA-1 TCACCGTGCTCGCT-1 TCACCTCTACGACT-1 
#>             "01"             "01"            "022"            "022"             "03" 
#> TCACCTCTTCCAAG-1 TCACGAGAGGAGGT-1 TCACTATGGGGCAA-1 TCACTATGGTTGTG-1 TCAGACGACGCTAA-1 
#>            "022"             "04"             "03"             "04"             "01" 
#> TCAGACGACGTTAG-1 TCAGAGACTCCAGA-1 TCAGCAGACTCCAC-1 TCAGCGCTCTAGTG-1 TCAGCGCTGGATCT-1 
#>             "03"             "01"             "01"             "01"             "04" 
#> TCAGCGCTGGTATC-1 TCAGGATGAAGTAG-1 TCAGGATGCCTTTA-1 TCAGTGGAAGATCC-1 TCAGTTACCTACGA-1 
#>             "01"             "01"            "022"             "03"            "021" 
#> TCAGTTACTAGAAG-1 TCATCAACCCGATA-1 TCATCAACTGTTCT-1 TCATCATGCAGTTG-1 TCATCCCTTACTGG-1 
#>             "01"             "01"            "022"             "01"             "01" 
#> TCATTCGATACAGC-1 TCCACGTGGAAACA-1 TCCACTCTACACTG-1 TCCACTCTGAGCTT-1 TCCACTCTTACTTC-1 
#>            "022"             "01"             "01"            "021"             "04" 
#> TCCATAACAAAGTG-1 TCCATAACCGTAGT-1 TCCATAACGATGAA-1 TCCATAACTACGCA-1 TCCATCCTCCCTAC-1 
#>             "01"             "04"             "01"             "01"             "03" 
#> TCCCACGATCATTC-1 TCCCATCTCAAAGA-1 TCCCGAACACAGTC-1 TCCCGAACTTCGCC-1 TCCCGATGAGATCC-1 
#>             "01"            "021"             "03"            "022"             "01" 
#> TCCCGATGCCTGAA-1 TCCCTACTCAACTG-1 TCCGAAGACAATCG-1 TCCGAAGACGTTAG-1 TCCGGACTGAGGTG-1 
#>            "021"             "04"            "021"             "01"             "01" 
#> TCCGGACTGTACGT-1 TCCTAAACATCGAC-1 TCCTAAACCGAGAG-1 TCCTAAACCGCATA-1 TCCTAATGGTTTGG-1 
#>             "01"             "01"             "01"             "03"             "03" 
#> TCCTACCTGTCGTA-1 TCCTATGAAAAGCA-1 TCGAATCTCTGGTA-1 TCGACCTGCCGATA-1 TCGACGCTTCTATC-1 
#>             "01"             "03"             "03"            "022"            "021" 
#> TCGACGCTTTGACG-1 TCGAGAACGACAGG-1 TCGAGAACGTTAGC-1 TCGAGCCTATCAGC-1 TCGAGCCTGCGAGA-1 
#>             "01"             "01"             "03"             "04"             "01" 
#> TCGAGCCTTGTGAC-1 TCGATACTATTCCT-1 TCGATACTTGCACA-1 TCGATTTGATGCCA-1 TCGATTTGCACTCC-1 
#>             "01"             "01"             "01"            "021"             "01" 
#> TCGATTTGCAGCTA-1 TCGATTTGCCTACC-1 TCGATTTGTCGTGA-1 TCGCAGCTAGATCC-1 TCGCCATGAGACTC-1 
#>             "03"            "021"             "04"             "01"             "01" 
#> TCGCCATGTGGTCA-1 TCGGACCTAACAGA-1 TCGGACCTATAAGG-1 TCGGACCTGTACAC-1 TCGGTAGAGTAGGG-1 
#>             "04"             "01"             "04"             "01"             "01" 
#> TCGGTAGATCCCAC-1 TCGTAGGATCGACA-1 TCGTTATGGACAAA-1 TCTAACACCAGTTG-1 TCTAACACGAGCAG-1 
#>             "04"             "01"             "01"             "03"            "022" 
#> TCTAACTGAACCAC-1 TCTAAGCTAATGCC-1 TCTAAGCTTAGTCG-1 TCTAAGCTTCTAGG-1 TCTAAGCTTGTTCT-1 
#>             "01"             "01"             "03"            "022"            "021" 
#> TCTAAGCTTTCGCC-1 TCTACAACGACTAC-1 TCTAGACTTAGAAG-1 TCTAGTTGCACCAA-1 TCTATGTGAAGAGT-1 
#>             "04"            "022"            "021"            "022"            "021" 
#> TCTATGTGAGTCTG-1 TCTCAAACCTAAGC-1 TCTCTAGAATTTCC-1 TCTGATACACGTGT-1 TCTGATACTCGCCT-1 
#>             "01"             "04"             "01"             "01"             "01" 
#> TCTTACGAACCTGA-1 TCTTCAGAGCTACA-1 TCTTGATGCGGAGA-1 TGAAATTGGTGAGG-1 TGAACCGAAAACGA-1 
#>            "021"            "022"             "01"            "021"             "01" 
#> TGAACCGACTACTT-1 TGAACCGATTCGGA-1 TGAAGCACTCACGA-1 TGAAGCTGAACGAA-1 TGAAGCTGCATGGT-1 
#>            "022"            "022"             "01"             "01"             "04" 
#> TGAAGCTGCGTAAC-1 TGAATAACCACTTT-1 TGAATAACTCCCAC-1 TGACACGACCTTAT-1 TGACCAGACAACCA-1 
#>             "01"             "01"             "03"             "04"             "01" 
#> TGACCAGAGGATTC-1 TGACCGCTAAAAGC-1 TGACCGCTCTGCAA-1 TGACGATGCAAAGA-1 TGACGCCTGTACCA-1 
#>             "01"             "01"             "01"            "021"             "01" 
#> TGACGCCTTTACTC-1 TGACTGGAAGAGAT-1 TGACTGGACCGTAA-1 TGACTGGACGCAAT-1 TGACTGGAGGACAG-1 
#>             "03"            "021"             "01"             "01"             "04" 
#> TGACTGGATTCTCA-1 TGACTTACACACCA-1 TGACTTACAGTCTG-1 TGACTTTGCGCATA-1 TGACTTTGTTTGTC-1 
#>             "01"             "01"            "022"             "01"             "01" 
#> TGAGACACAAGGTA-1 TGAGACACTCAAGC-1 TGAGCTGAATGCTG-1 TGAGCTGACTGGAT-1 TGAGCTGATGCTAG-1 
#>             "01"             "01"            "022"            "021"            "021" 
#> TGAGGACTCTCATT-1 TGAGGACTTCATTC-1 TGAGGTACGAACCT-1 TGAGTCGAGTTACG-1 TGAGTGACTGAGCT-1 
#>            "021"             "01"            "022"             "04"             "01" 
#> TGATAAACGAATCC-1 TGATAAACTCCGTC-1 TGATAAACTTTCAC-1 TGATACCTCACTAG-1 TGATACCTGTTGGT-1 
#>             "01"             "03"             "01"            "021"             "01" 
#> TGATACCTTATGCG-1 TGATACCTTGAAGA-1 TGATATGAACCTTT-1 TGATCACTAGCATC-1 TGATCACTCTCGCT-1 
#>             "01"             "01"             "01"             "03"             "01" 
#> TGATCACTTCTACT-1 TGATCGGACTGACA-1 TGATCGGAGGAGCA-1 TGATCGGATATGCG-1 TGATTAGACATTGG-1 
#>             "04"            "022"             "04"            "022"             "01" 
#> TGATTAGATGACTG-1 TGATTAGATGCTAG-1 TGATTCACTATGCG-1 TGATTCACTGTCAG-1 TGATTCTGCCGAAT-1 
#>             "04"             "01"             "01"             "04"             "01" 
#> TGATTCTGCTCTTA-1 TGCAAGTGAGAACA-1 TGCAAGTGGGTAGG-1 TGCAATCTTCAGGT-1 TGCACAGACGACAT-1 
#>             "01"             "01"            "021"            "022"             "03" 
#> TGCCAAGAGCAGTT-1 TGCCAAGATCTCTA-1 TGCCACTGAACGTC-1 TGCCACTGCGATAC-1 TGCCAGCTTGGCAT-1 
#>            "021"             "01"             "01"             "03"             "01" 
#> TGCCCAACAGCAAA-1 TGCCCAACCGCATA-1 TGCCGACTCTCCCA-1 TGCGAAACAGTCAC-1 TGCGAAACGTTGCA-1 
#>             "01"            "022"             "04"             "04"             "04" 
#> TGCGATGAACGGTT-1 TGCGATGACCTCGT-1 TGCGATGACTAGTG-1 TGCGATGACTGCTC-1 TGCGATGACTTGCC-1 
#>             "01"             "01"             "04"             "04"             "04" 
#> TGCGATGAGTGCTA-1 TGCGCACTCTTGAG-1 TGCGTAGAATAAGG-1 TGCGTAGACGGGAA-1 TGCGTAGATGGTCA-1 
#>            "021"            "021"            "021"             "04"            "022" 
#> TGCTAGGAAACCGT-1 TGCTAGGATAGTCG-1 TGCTATACGGTTCA-1 TGCTATACTGCTGA-1 TGCTGAGAGAGCAG-1 
#>             "03"             "01"            "021"             "03"             "03" 
#> TGCTGAGATTATCC-1 TGGAAAGACTCTCG-1 TGGAAAGAGCGATT-1 TGGAAAGAGGTCAT-1 TGGAAAGATATGGC-1 
#>             "01"             "04"             "01"            "022"             "01" 
#> TGGAACACAAACAG-1 TGGAACACGCTAAC-1 TGGAAGCTCAGATC-1 TGGACCCTACACTG-1 TGGACCCTCATGGT-1 
#>             "03"             "01"             "01"            "021"             "01" 
#> TGGACCCTGGTACT-1 TGGACTGAGTATGC-1 TGGAGACTATCAGC-1 TGGAGACTTCAAGC-1 TGGAGACTTGACCA-1 
#>            "022"             "01"            "021"             "01"             "03" 
#> TGGAGGGACGGAGA-1 TGGAGGGAGCTATG-1 TGGATCGATAAAGG-1 TGGATGTGACCTAG-1 TGGATGTGTGAAGA-1 
#>            "021"             "01"             "01"             "04"             "04" 
#> TGGATTCTCATACG-1 TGGCAATGCTTGTT-1 TGGCACCTTCACGA-1 TGGCACCTTCAGTG-1 TGGGTATGAAGAGT-1 
#>             "01"             "04"             "01"            "022"             "01" 
#> TGGGTATGCACAAC-1 TGGGTATGGTACGT-1 TGGGTATGTTTGGG-1 TGGTAGACATGCCA-1 TGGTAGACCCTCAC-1 
#>             "01"             "04"            "021"             "01"             "03" 
#> TGGTAGACCTGATG-1 TGGTAGTGCACTGA-1 TGGTATCTAAACAG-1 TGGTATCTCTTCCG-1 TGGTCAGACCCAAA-1 
#>             "01"            "021"             "01"             "01"             "01" 
#> TGGTTACTGACGTT-1 TGGTTACTGTTCTT-1 TGTAACCTAGAGGC-1 TGTAACCTTGCCTC-1 TGTAATGACACAAC-1 
#>            "021"             "01"             "01"            "022"             "03" 
#> TGTAATGAGGTAAA-1 TGTACTTGCTCTAT-1 TGTAGGTGCGAGAG-1 TGTAGGTGCTATGG-1 TGTAGGTGCTCTAT-1 
#>             "03"            "022"             "04"             "01"            "022" 
#> TGTAGGTGTGCTGA-1 TGTAGTCTTCCAGA-1 TGTAGTCTTGCACA-1 TGTATCTGTTAGGC-1 TGTATGCTCATGGT-1 
#>             "01"             "01"             "03"             "01"             "04" 
#> TGTATGCTGTAGGG-1 TGTATGCTTTCATC-1 TGTCAGGAATACCG-1 TGTCAGGAGATGAA-1 TGTCTAACCCCTTG-1 
#>             "01"             "01"             "01"            "022"             "01" 
#> TGTGACGATTCTCA-1 TGTGAGACTGTCAG-1 TGTGAGACTTGAGC-1 TGTGAGTGACCACA-1 TGTGAGTGAGTGCT-1 
#>             "03"            "022"             "01"             "01"            "022" 
#> TGTGAGTGGAGATA-1 TGTGATCTCTCTAT-1 TGTGATCTGACACT-1 TGTGGATGGCCAAT-1 TGTTAAGACAAAGA-1 
#>             "03"             "04"             "01"             "04"            "021" 
#> TGTTAAGATAAGGA-1 TGTTACACCGCATA-1 TGTTACACGACTAC-1 TGTTACTGGCTACA-1 TGTTACTGTAGTCG-1 
#>            "021"            "022"            "021"             "03"             "03" 
#> TTAACCACCGTAAC-1 TTAACCACTAAGGA-1 TTAACCACTCAGAC-1 TTACACACGTGTTG-1 TTACACACTCCTAT-1 
#>             "01"             "03"             "01"             "01"             "01" 
#> TTACCATGAATCGC-1 TTACCATGGTTGAC-1 TTACCATGTGTCTT-1 TTACCATGTTGTGG-1 TTACGACTGAGAGC-1 
#>            "021"             "01"             "03"             "04"             "01" 
#> TTACGACTTGACAC-1 TTACGTACGTTCAG-1 TTACTCGAAGAATG-1 TTACTCGACGCAAT-1 TTACTCGAGGGTGA-1 
#>            "021"             "03"            "021"            "022"             "01" 
#> TTACTCGATCTACT-1 TTAGAATGTGGTGT-1 TTAGAATGTGTAGC-1 TTAGACCTCCTACC-1 TTAGACCTCCTTTA-1 
#>             "03"             "01"             "01"             "01"            "021" 
#> TTAGCTACAACCGT-1 TTAGCTACTGTCCC-1 TTAGCTACTTTCGT-1 TTAGGGACGCGAAG-1 TTAGGGTGCTGGAT-1 
#>             "01"            "022"             "01"             "01"             "04" 
#> TTAGGGTGTCCTGC-1 TTAGGTCTACTTTC-1 TTAGTCACCAGTTG-1 TTAGTCTGAAAGCA-1 TTAGTCTGCCAACA-1 
#>            "022"            "021"             "01"             "04"             "03" 
#> TTAGTCTGTGCACA-1 TTATCCGACTAGTG-1 TTATCCGAGAAAGT-1 TTATGAGAGATAAG-1 TTATGCACGTCACA-1 
#>             "01"             "04"            "022"             "01"             "04" 
#> TTATGGCTTATGGC-1 TTATTCCTATGCTG-1 TTATTCCTGGACAG-1 TTATTCCTGGTACT-1 TTATTCCTTCGTGA-1 
#>            "022"            "022"             "04"             "04"             "01" 
#> TTCAAAGATAAAGG-1 TTCAACACAACAGA-1 TTCAACACCCCAAA-1 TTCAACACGGACGA-1 TTCAAGCTAAGAAC-1 
#>             "01"             "01"            "021"            "022"            "021" 
#> TTCAAGCTAGATGA-1 TTCAAGCTGTTGAC-1 TTCAAGCTTGATGC-1 TTCAAGCTTTCGCC-1 TTCACAACCCGTTC-1 
#>             "01"             "01"             "01"             "01"            "022" 
#> TTCACAACGTCTGA-1 TTCAGACTACCCAA-1 TTCAGACTCTCGAA-1 TTCAGTACCGACTA-1 TTCAGTACTCAAGC-1 
#>            "021"             "01"             "01"             "01"             "01" 
#> TTCAGTACTCCTAT-1 TTCAGTTGCCAAGT-1 TTCAGTTGTCCTTA-1 TTCAGTTGTCTAGG-1 TTCAGTTGTCTCGC-1 
#>            "021"             "01"            "021"             "01"             "04" 
#> TTCATCGAGGTGGA-1 TTCATGTGTGGTGT-1 TTCATTCTATGTCG-1 TTCATTCTTCTCTA-1 TTCCAAACCTATGG-1 
#>            "021"             "01"            "021"             "01"            "021" 
#> TTCCAAACCTCCCA-1 TTCCAAACTCCCAC-1 TTCCAAACTTGACG-1 TTCCATGACGAGAG-1 TTCCATGACTGTCC-1 
#>             "04"             "03"             "03"            "021"             "01" 
#> TTCCCACTTGAGGG-1 TTCCCACTTGTCTT-1 TTCCTAGAAAGTGA-1 TTCCTAGACTAGTG-1 TTCGAGGACTCTAT-1 
#>             "03"            "021"             "01"            "022"             "01" 
#> TTCGAGGAGGGCAA-1 TTCGAGGATAGAAG-1 TTCGATTGAGCATC-1 TTCGGAGAATGCCA-1 TTCGGAGATGTGCA-1 
#>             "01"            "022"             "01"            "021"             "01" 
#> TTCGTATGAAAAGC-1 TTCGTATGGATAGA-1 TTCGTATGGTCTGA-1 TTCGTATGTCCTTA-1 TTCTACGAACGTAC-1 
#>             "03"             "03"             "01"            "022"             "01" 
#> TTCTACGAGTTGGT-1 TTCTAGTGACACGT-1 TTCTAGTGCATGAC-1 TTCTAGTGGAGAGC-1 TTCTAGTGGTCACA-1 
#>             "01"             "01"            "021"             "03"            "022" 
#> TTCTCAGAAGAGAT-1 TTCTCAGAAGCATC-1 TTCTCAGATGGAGG-1 TTCTGATGGAGACG-1 TTCTTACTCTGGAT-1 
#>             "01"             "04"             "01"             "03"            "022" 
#> TTGAACCTCCTTGC-1 TTGAATGAACTACG-1 TTGAATGACTTACT-1 TTGAATGATCTCAT-1 TTGACACTCTGTAG-1 
#>             "04"            "022"             "01"             "04"             "01" 
#> TTGACACTGATAAG-1 TTGAGGACAGAACA-1 TTGAGGACTACGCA-1 TTGAGGTGGACGGA-1 TTGCATTGAGCTAC-1 
#>             "04"            "021"            "022"             "01"             "01" 
#> TTGCATTGCTAAGC-1 TTGCATTGTGACTG-1 TTGCTAACACCAAC-1 TTGCTAACACGCTA-1 TTGCTAACCACTCC-1 
#>            "021"             "01"             "01"            "022"             "01" 
#> TTGCTATGGTACGT-1 TTGCTATGGTAGGG-1 TTGGAGACCAATCG-1 TTGGAGACGCTATG-1 TTGGAGACTATGGC-1 
#>            "022"            "022"             "01"            "021"             "04" 
#> TTGGGAACTGAACC-1 TTGGTACTACTGGT-1 TTGGTACTCTTAGG-1 TTGGTACTGAATCC-1 TTGGTACTGGATTC-1 
#>             "01"            "022"             "01"             "04"             "04" 
#> TTGTACACGTTGTG-1 TTGTACACTTGCAG-1 TTGTAGCTAGCTCA-1 TTGTAGCTCTCTTA-1 TTGTCATGGACGGA-1 
#>             "04"             "01"             "01"             "04"             "03" 
#> TTTAGAGATCCTCG-1 TTTAGCTGATACCG-1 TTTAGCTGGATACC-1 TTTAGCTGTACTCT-1 TTTAGGCTCCTTTA-1 
#>             "04"             "01"            "021"            "021"            "021" 
#> TTTATCCTGTTGTG-1 TTTCACGAGGTTCA-1 TTTCAGTGGAAGGC-1 TTTCAGTGTCACGA-1 TTTCAGTGTCTATC-1 
#>            "022"             "01"             "01"             "04"            "021" 
#> TTTCAGTGTGCAGT-1 TTTCCAGAGGTGAG-1 TTTCGAACACCTGA-1 TTTCGAACTCTCAT-1 TTTCTACTGAGGCA-1 
#>             "04"             "01"             "04"            "021"             "04" 
#> TTTCTACTTCCTCG-1 TTTGCATGAGAGGC-1 TTTGCATGCCTCAC-1 
#>             "04"             "04"             "01"

show/hide code output

get_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 807))
#> AAACATACAACCAC-1 AAACATTGAGCTAC-1 AAACATTGATCAGC-1 AAACCGTGCTTCCG-1 AAACCGTGTATGCG-1 
#>             "01"             "04"             "01"             "02"             "03" 
#> AAACGCACTGGTAC-1 AAACGCTGACCAGT-1 AAACGCTGGTTCTT-1 AAACGCTGTAGCCA-1 AAACGCTGTTTCTG-1 
#>             "01"             "01"             "01"             "03"             "02" 
#> AAACTTGAAAAACG-1 AAACTTGATCCAGA-1 AAAGAGACGAGATA-1 AAAGAGACGCGAGA-1 AAAGAGACGGACTT-1 
#>             "04"             "01"             "01"             "02"             "01" 
#> AAAGAGACGGCATT-1 AAAGCAGATATCGG-1 AAAGCCTGTATGCG-1 AAAGGCCTGTCTAG-1 AAAGTTTGATCACG-1 
#>             "01"             "02"             "01"             "04"             "04" 
#> AAAGTTTGGGGTGA-1 AAAGTTTGTAGAGA-1 AAAGTTTGTAGCGT-1 AAATCAACAATGCC-1 AAATCAACACCAGT-1 
#>             "04"             "01"             "02"             "04"             "01" 
#> AAATCAACCAGGAG-1 AAATCAACCCTATT-1 AAATCAACGGAAGC-1 AAATCAACTCGCAA-1 AAATCATGACCACA-1 
#>             "01"             "02"             "01"             "01"             "02" 
#> AAATCCCTCCACAA-1 AAATCCCTGCTATG-1 AAATGTTGAACGAA-1 AAATGTTGCCACAA-1 AAATGTTGTGGCAT-1 
#>             "01"             "04"             "02"             "03"             "02" 
#> AAATTCGAAGGTTC-1 AAATTCGAATCACG-1 AAATTCGAGCTGAT-1 AAATTCGAGGAGTG-1 AAATTCGATTCTCA-1 
#>             "01"             "02"             "02"             "01"             "03" 
#> AAATTGACACGACT-1 AAATTGACTCGCTC-1 AACAAACTCATTTC-1 AACAAACTTTCGTT-1 AACAATACGACGAG-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> AACACGTGCAGAGG-1 AACACGTGGAAAGT-1 AACACGTGGAACCT-1 AACACGTGGCTACA-1 AACACGTGTACGAC-1 
#>             "01"             "01"             "02"             "01"             "02" 
#> AACAGCACAAGAGT-1 AACATTGATGGGAG-1 AACCAGTGATACCG-1 AACCCAGATCGCTC-1 AACCGATGCTCCCA-1 
#>             "02"             "02"             "02"             "01"             "01" 
#> AACCGATGGTCATG-1 AACCGATGTTCTAC-1 AACCGCCTAGCGTT-1 AACCGCCTCTACGA-1 AACCTACTGTGAGG-1 
#>             "04"             "02"             "01"             "02"             "02" 
#> AACCTACTGTGTTG-1 AACCTTACGAGACG-1 AACCTTACGCGAGA-1 AACCTTACTAACGC-1 AACCTTTGGACGGA-1 
#>             "01"             "01"             "03"             "02"             "01" 
#> AACCTTTGTACGCA-1 AACGCAACAAGTAG-1 AACGCATGACCCAA-1 AACGCATGCCTTCG-1 AACGCATGTACTTC-1 
#>             "02"             "01"             "01"             "01"             "01" 
#> AACGCCCTCGGGAA-1 AACGCCCTCGTACA-1 AACGCCCTGGCATT-1 AACGTCGAGTATCG-1 AACGTGTGAAAGCA-1 
#>             "01"             "03"             "03"             "03"             "01" 
#> AACGTGTGGCGGAA-1 AACGTGTGTCCAAG-1 AACGTGTGTGCTTT-1 AACTACCTTAGAGA-1 AACTCACTCAAGCT-1 
#>             "04"             "01"             "01"             "01"             "02" 
#> AACTCACTTGGAGG-1 AACTCGGAAAGTGA-1 AACTCGGAAGGTCT-1 AACTCTTGCAGGAG-1 AACTGTCTCCCTTG-1 
#>             "02"             "03"             "02"             "01"             "02" 
#> AACTTGCTACGCTA-1 AACTTGCTGGGACA-1 AAGAACGAGTGTTG-1 AAGAAGACGTAGGG-1 AAGACAGAAGTCTG-1 
#>             "04"             "01"             "01"             "04"             "04" 
#> AAGACAGAGGATCT-1 AAGACAGATTACCT-1 AAGAGATGGGTAGG-1 AAGATGGAAAACAG-1 AAGATGGAGAACTC-1 
#>             "01"             "02"             "04"             "04"             "02" 
#> AAGATGGAGATAAG-1 AAGATTACAACCTG-1 AAGATTACAGATCC-1 AAGATTACCCGTTC-1 AAGATTACCGCCTT-1 
#>             "02"             "01"             "02"             "02"             "02" 
#> AAGATTACCTCAAG-1 AAGATTACTCCTCG-1 AAGCAAGAGCGAGA-1 AAGCAAGAGCTTAG-1 AAGCAAGAGGTGTT-1 
#>             "03"             "02"             "01"             "03"             "03" 
#> AAGCACTGAGCAAA-1 AAGCACTGCATACG-1 AAGCACTGGTTCTT-1 AAGCCAACGTGTTG-1 AAGCCATGAACTGC-1 
#>             "04"             "01"             "04"             "01"             "02" 
#> AAGCCATGACACGT-1 AAGCCATGCGTGAT-1 AAGCCATGTCTCGC-1 AAGCCTGACATGCA-1 AAGCCTGACCGAAT-1 
#>             "02"             "01"             "01"             "01"             "02" 
#> AAGCGACTCCTCAC-1 AAGCGACTGTGTCA-1 AAGCGACTTACAGC-1 AAGCGACTTTGACG-1 AAGCGTACGTCTTT-1 
#>             "02"             "01"             "04"             "02"             "01" 
#> AAGGCTTGCGAACT-1 AAGGTCACGGTTAC-1 AAGGTCACTGTTTC-1 AAGGTCACTTCCCG-1 AAGGTCTGACAGTC-1 
#>             "03"             "02"             "04"             "01"             "01" 
#> AAGGTCTGCAGATC-1 AAGTAACTCTGAAC-1 AAGTAACTGAGATA-1 AAGTAGGATACAGC-1 AAGTATACCGAACT-1 
#>             "01"             "02"             "04"             "03"             "01" 
#> AAGTCCGACTTGTT-1 AAGTCCGATAGAAG-1 AAGTCTCTAGTCGT-1 AAGTCTCTCGGAGA-1 AAGTGGCTTGGAGG-1 
#>             "01"             "01"             "01"             "03"             "04" 
#> AAGTTCCTCATTCT-1 AAGTTCCTTCTTAC-1 AATAAGCTCGAATC-1 AATAAGCTCGTTGA-1 AATACCCTGGACGA-1 
#>             "02"             "01"             "01"             "01"             "04" 
#> AATACCCTGGCATT-1 AATACTGAAAGGGC-1 AATACTGAATTGGC-1 AATAGGGAACCCTC-1 AATAGGGAGAATGA-1 
#>             "01"             "03"             "03"             "04"             "03" 
#> AATCAAACTATCGG-1 AATCCGGAATGCTG-1 AATCCTACCGGTAT-1 AATCCTTGACGGGA-1 AATCCTTGGTGAGG-1 
#>             "01"             "04"             "01"             "02"             "03" 
#> AATCGGTGGAACTC-1 AATCGGTGTGCTTT-1 AATCTAGAAAAGTG-1 AATCTAGAATCGGT-1 AATCTCACAGCCTA-1 
#>             "03"             "01"             "01"             "01"             "02" 
#> AATCTCACTCTAGG-1 AATCTCTGAACAGA-1 AATCTCTGCTTTAC-1 AATGATACACCAAC-1 AATGATACGGTCAT-1 
#>             "01"             "01"             "03"             "03"             "02" 
#> AATGCGTGACACCA-1 AATGCGTGGACGGA-1 AATGCGTGGCTATG-1 AATGGAGAATCGTG-1 AATGGAGATCCTTA-1 
#>             "04"             "02"             "04"             "02"             "01" 
#> AATGGCTGACACCA-1 AATGGCTGCGTGAT-1 AATGGCTGTAAAGG-1 AATGGCTGTACTCT-1 AATGGCTGTGAAGA-1 
#>             "04"             "01"             "03"             "03"             "01" 
#> AATGTAACGGTGGA-1 AATGTCCTCTTCTA-1 AATGTTGACAGTCA-1 AATGTTGAGTTGAC-1 AATGTTGATCTACT-1 
#>             "01"             "01"             "01"             "02"             "01" 
#> AATTACGAATTCCT-1 AATTACGACTTCTA-1 AATTACGAGTGAGG-1 AATTACGATTGGCA-1 AATTCCTGCTCAGA-1 
#>             "02"             "01"             "01"             "04"             "04" 
#> AATTGATGTCGCAA-1 AATTGTGACTTGGA-1 ACAAAGGAGGGTGA-1 ACAAATTGATTCTC-1 ACAAATTGCTCAGA-1 
#>             "02"             "04"             "01"             "02"             "02" 
#> ACAAATTGTTGCGA-1 ACAACCGAGGGATG-1 ACAACCGAGTTACG-1 ACAAGAGAAGTCGT-1 ACAAGAGACTTATC-1 
#>             "03"             "03"             "01"             "02"             "01" 
#> ACAAGAGAGTTGAC-1 ACAATCCTAACCGT-1 ACAATCCTTAGCGT-1 ACAATTGACTGACA-1 ACAATTGATGACTG-1 
#>             "04"             "01"             "04"             "03"             "03" 
#> ACACAGACCATACG-1 ACACCAGAGGGCAA-1 ACACCCTGGTGTTG-1 ACACGAACAGTTCG-1 ACACGATGACGCAT-1 
#>             "03"             "01"             "03"             "01"             "03" 
#> ACACGATGATGTGC-1 ACACGATGTCGTAG-1 ACACGATGTGGTCA-1 ACAGACACGGCATT-1 ACAGACACGTTGTG-1 
#>             "02"             "01"             "01"             "03"             "01" 
#> ACAGCAACACCTAG-1 ACAGCAACCTCAAG-1 ACAGGTACCCCACT-1 ACAGGTACGCTGTA-1 ACAGGTACTGGTGT-1 
#>             "02"             "02"             "01"             "01"             "03" 
#> ACAGTCGACCCAAA-1 ACAGTCGACCGATA-1 ACAGTGACTCACCC-1 ACAGTGACTCTATC-1 ACAGTGTGGTCACA-1 
#>             "01"             "03"             "01"             "01"             "01" 
#> ACAGTGTGTTGCGA-1 ACATCACTCTACTT-1 ACATGGTGAAGCCT-1 ACATGGTGCAACCA-1 ACATGGTGCGAGTT-1 
#>             "02"             "02"             "01"             "04"             "01" 
#> ACATTCTGGCATAC-1 ACATTCTGGGAACG-1 ACCAACGACATGCA-1 ACCACAGAAAGTAG-1 ACCACAGAGTTGGT-1 
#>             "01"             "02"             "01"             "01"             "01" 
#> ACCACCTGTGTGCA-1 ACCACGCTACAGCT-1 ACCACGCTACCCAA-1 ACCACGCTGCGAGA-1 ACCACGCTGCTGTA-1 
#>             "01"             "01"             "03"             "01"             "01" 
#> ACCAGCCTGACAGG-1 ACCAGTGAACGGTT-1 ACCAGTGAATACCG-1 ACCAGTGAGGGATG-1 ACCAGTGATGACTG-1 
#>             "01"             "04"             "02"             "01"             "02" 
#> ACCATTACCTTCTA-1 ACCATTACGAGATA-1 ACCATTTGTCATTC-1 ACCCAAGAACTGTG-1 ACCCAAGAATTCCT-1 
#>             "01"             "03"             "01"             "03"             "02" 
#> ACCCAAGAGGACAG-1 ACCCAAGATTCACT-1 ACCCACTGCGCCTT-1 ACCCACTGGACAGG-1 ACCCACTGGTTCAG-1 
#>             "01"             "04"             "02"             "01"             "03" 
#> ACCCACTGTCGTAG-1 ACCCAGCTCAGAAA-1 ACCCAGCTGTTAGC-1 ACCCAGCTTGCTTT-1 ACCCGTTGATGACC-1 
#>             "02"             "01"             "02"             "01"             "04" 
#> ACCCGTTGCTGCAA-1 ACCCGTTGCTTCTA-1 ACCCTCGACCTATT-1 ACCCTCGACGGTAT-1 ACCCTCGATAAGGA-1 
#>             "01"             "01"             "03"             "04"             "02" 
#> ACCCTCGATCAAGC-1 ACCGTGCTACCAGT-1 ACCGTGCTGGAACG-1 ACCTATTGCTGAGT-1 ACCTATTGTGCCCT-1 
#>             "02"             "01"             "04"             "04"             "02" 
#> ACCTCCGAGTCCTC-1 ACCTCCGATATGCG-1 ACCTCCGATGCTGA-1 ACCTCGTGAACCAC-1 ACCTGAGATATCGG-1 
#>             "01"             "01"             "01"             "01"             "02" 
#> ACCTGGCTAAGTAG-1 ACCTTTGACTCCCA-1 ACCTTTGAGGAACG-1 ACCTTTGAGGAAGC-1 ACGAACACCTTGTT-1 
#>             "03"             "02"             "02"             "02"             "03" 
#> ACGAACTGGCTATG-1 ACGAAGCTCTCCAC-1 ACGAAGCTCTGAGT-1 ACGACCCTATCTCT-1 ACGACCCTGATGAA-1 
#>             "02"             "01"             "04"             "02"             "01" 
#> ACGACCCTTGACAC-1 ACGACCCTTGACCA-1 ACGAGGGACAGGAG-1 ACGAGGGACGAACT-1 ACGAGGGATGTAGC-1 
#>             "04"             "01"             "02"             "01"             "01" 
#> ACGAGTACCCTAAG-1 ACGAGTACGAATCC-1 ACGATCGAGGACTT-1 ACGATCGAGTCACA-1 ACGATGACAATGCC-1 
#>             "04"             "04"             "03"             "02"             "01" 
#> ACGATGACTGGTCA-1 ACGATTCTACGGGA-1 ACGCAATGGTTCAG-1 ACGCACCTGTTAGC-1 ACGCCACTGAACTC-1 
#>             "01"             "03"             "03"             "04"             "02" 
#> ACGCCGGAAACCAC-1 ACGCCGGAAAGCCT-1 ACGCCGGAAATGCC-1 ACGCCTTGCTCCCA-1 ACGCGGTGGCGAGA-1 
#>             "02"             "01"             "01"             "02"             "01" 
#> ACGCGGTGTGTGGT-1 ACGCGGTGTTTGCT-1 ACGCTCACAGTACC-1 ACGCTCACCCTTGC-1 ACGCTGCTGTTCTT-1 
#>             "04"             "03"             "01"             "01"             "03" 
#> ACGGAACTCAGATC-1 ACGGAACTGTCGTA-1 ACGGAGGACTCTTA-1 ACGGATTGGGAGGT-1 ACGGATTGGTTAGC-1 
#>             "03"             "02"             "02"             "04"             "01" 
#> ACGGCTCTGAGCAG-1 ACGGCTCTTGCACA-1 ACGGTAACCGCTAA-1 ACGGTAACCTTCGC-1 ACGGTAACGGTGGA-1 
#>             "01"             "01"             "03"             "03"             "01" 
#> ACGGTAACTCGCAA-1 ACGGTATGAGTCGT-1 ACGGTATGGGTATC-1 ACGGTATGGTTGTG-1 ACGGTCCTAACGGG-1 
#>             "01"             "02"             "04"             "04"             "01" 
#> ACGGTCCTCGGGAA-1 ACGTAGACAACCAC-1 ACGTAGACTACAGC-1 ACGTCAGAAACGAA-1 ACGTCAGAGAGCTT-1 
#>             "01"             "01"             "04"             "01"             "02" 
#> ACGTCAGAGGGATG-1 ACGTCCTGATAAGG-1 ACGTCCTGTGAACC-1 ACGTCGCTCCTGAA-1 ACGTCGCTCTATTC-1 
#>             "01"             "02"             "02"             "03"             "02" 
#> ACGTCGCTTCTCAT-1 ACGTGATGCCATGA-1 ACGTGATGGGTCTA-1 ACGTGATGTAACCG-1 ACGTGATGTGACAC-1 
#>             "04"             "02"             "01"             "02"             "03" 
#> ACGTGCCTCCGTAA-1 ACGTGCCTTCTATC-1 ACGTTACTTTCCAT-1 ACGTTGGAAAAGCA-1 ACGTTGGAAACCTG-1 
#>             "01"             "03"             "01"             "01"             "03" 
#> ACGTTGGACCGTAA-1 ACGTTGGAGCCAAT-1 ACGTTGGATATGGC-1 ACGTTGGATCAGGT-1 ACGTTTACATCAGC-1 
#>             "02"             "03"             "04"             "02"             "01" 
#> ACTAAAACCCACAA-1 ACTAAAACTCGACA-1 ACTACGGAATTTCC-1 ACTACGGACCTATT-1 ACTACGGATCGCTC-1 
#>             "01"             "02"             "01"             "01"             "01" 
#> ACTACTACTAAGGA-1 ACTAGGTGGAACCT-1 ACTAGGTGGAACTC-1 ACTATCACCTTGGA-1 ACTATCACTGCCAA-1 
#>             "01"             "01"             "01"             "03"             "01" 
#> ACTCAGGACTGAAC-1 ACTCAGGATCTATC-1 ACTCAGGATTCGTT-1 ACTCCTCTCAACTG-1 ACTCGCACGAAAGT-1 
#>             "01"             "04"             "02"             "01"             "02" 
#> ACTCGCACTACGAC-1 ACTCTCCTGACACT-1 ACTCTCCTGCATAC-1 ACTCTCCTGTTTGG-1 ACTGAGACAACCAC-1 
#>             "02"             "01"             "04"             "01"             "03" 
#> ACTGAGACCCATAG-1 ACTGAGACGTTGGT-1 ACTGCCACACACGT-1 ACTGCCACTCCGTC-1 ACTGGCCTTCAGTG-1 
#>             "02"             "04"             "03"             "03"             "03" 
#> ACTGTGGACGTGTA-1 ACTGTGGATCTAGG-1 ACTGTTACCCACAA-1 ACTGTTACTGCAGT-1 ACTTAAGAACCACA-1 
#>             "03"             "04"             "02"             "01"             "01" 
#> ACTTAAGATTACTC-1 ACTTAGCTGCGTAT-1 ACTTAGCTGGGAGT-1 ACTTCAACAAGCAA-1 ACTTCAACGTAGGG-1 
#>             "02"             "02"             "01"             "03"             "03" 
#> ACTTCCCTTTCCGC-1 ACTTCTGACATGCA-1 ACTTGACTCCACAA-1 ACTTGGGAGAAAGT-1 ACTTGGGAGGTTTG-1 
#>             "01"             "04"             "04"             "02"             "01" 
#> ACTTGGGATGTGAC-1 ACTTGGGATTGACG-1 ACTTGTACCTGTCC-1 ACTTTGTGGAAAGT-1 ACTTTGTGGATAGA-1 
#>             "02"             "02"             "01"             "01"             "02" 
#> AGAAACGAAAGTAG-1 AGAAAGTGCGCAAT-1 AGAAAGTGGGGATG-1 AGAACAGAAATGCC-1 AGAACAGACGACTA-1 
#>             "04"             "01"             "02"             "03"             "04" 
#> AGAACAGAGACAAA-1 AGAACGCTTTGCTT-1 AGAAGATGTGACTG-1 AGAATGGAAGAAGT-1 AGAATTTGTAACCG-1 
#>             "01"             "01"             "01"             "03"             "01" 
#> AGAATTTGTAGAGA-1 AGACACACTGTAGC-1 AGACACTGTCAAGC-1 AGACCTGAAGTAGA-1 AGACCTGACCAACA-1 
#>             "01"             "01"             "02"             "02"             "01" 
#> AGACCTGAGGAAGC-1 AGACGTACAGAGGC-1 AGACGTACCCCTAC-1 AGACGTACCTCTTA-1 AGACGTACTCGTGA-1 
#>             "01"             "01"             "04"             "02"             "02" 
#> AGACTGACCATCAG-1 AGACTGACCCTTTA-1 AGACTTCTCATGCA-1 AGAGATGACAGTCA-1 AGAGATGACTGAAC-1 
#>             "01"             "01"             "04"             "04"             "01" 
#> AGAGATGAGGTTTG-1 AGAGATGATCTCGC-1 AGAGATGATTGTGG-1 AGAGCGGAGGCAAG-1 AGAGTCTGGTCGTA-1 
#>             "02"             "04"             "01"             "02"             "02" 
#> AGAGTGCTCAGCTA-1 AGAGTGCTCGAATC-1 AGAGTGCTGTCATG-1 AGAGTGCTGTCCTC-1 AGAGTGCTGTGTTG-1 
#>             "01"             "01"             "01"             "01"             "04" 
#> AGATATACCCGTAA-1 AGATATACGATGAA-1 AGATATACTGTTCT-1 AGATATTGCCTACC-1 AGATATTGGCCAAT-1 
#>             "03"             "01"             "04"             "01"             "02" 
#> AGATCGTGTCTGGA-1 AGATCGTGTTTGTC-1 AGATCTCTATCACG-1 AGATTAACGTTCTT-1 AGATTCCTATCGTG-1 
#>             "02"             "04"             "04"             "02"             "01" 
#> AGATTCCTCACTTT-1 AGATTCCTGACGAG-1 AGATTCCTGTTCAG-1 AGCAAAGATATGCG-1 AGCACAACAGTCTG-1 
#>             "02"             "02"             "03"             "01"             "01" 
#> AGCACTGAGGGAGT-1 AGCACTGATATGCG-1 AGCACTGATGCTTT-1 AGCACTGATTGCGA-1 AGCATCGAAGATCC-1 
#>             "01"             "01"             "02"             "01"             "01" 
#> AGCATCGAAGGGTG-1 AGCATCGAGCTTCC-1 AGCATCGAGTGAGG-1 AGCATCGATAACCG-1 AGCATGACGATGAA-1 
#>             "04"             "02"             "01"             "02"             "03" 
#> AGCCAATGGGGAGT-1 AGCCAATGTATCTC-1 AGCCACCTGGATCT-1 AGCCGGTGCCAATG-1 AGCCGGTGTGTTTC-1 
#>             "02"             "01"             "03"             "01"             "01" 
#> AGCCGTCTCAATCG-1 AGCCGTCTGAGAGC-1 AGCCTCACGTTCGA-1 AGCCTCACTGTCAG-1 AGCCTCTGCAGTTG-1 
#>             "01"             "01"             "01"             "02"             "04" 
#> AGCCTCTGCCAATG-1 AGCGAACTGGATCT-1 AGCGAACTTACTGG-1 AGCGATACGGAGCA-1 AGCGATTGAGATCC-1 
#>             "03"             "01"             "01"             "01"             "03" 
#> AGCGCCGAATCTCT-1 AGCGCCGACAGAGG-1 AGCGCTCTACCTTT-1 AGCGGCACCGGGAA-1 AGCGGCTGATGTGC-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> AGCGGGCTTGCCAA-1 AGCGTAACATGCTG-1 AGCGTAACTGAGAA-1 AGCTCGCTACTGGT-1 AGCTCGCTCTGCTC-1 
#>             "01"             "01"             "02"             "01"             "01" 
#> AGCTGAACCATACG-1 AGCTGAACCTCTCG-1 AGCTGCCTTGGGAG-1 AGCTGCCTTTCATC-1 AGCTGCCTTTCTGT-1 
#>             "02"             "01"             "02"             "01"             "01" 
#> AGCTGTGATCCAAG-1 AGCTTTACAAGTAG-1 AGCTTTACACCAAC-1 AGCTTTACTCTCAT-1 AGGAAATGAGGAGC-1 
#>             "01"             "01"             "01"             "04"             "01" 
#> AGGAACCTCTTAGG-1 AGGAACCTTGCCTC-1 AGGAATGATAACGC-1 AGGAATGATTTGTC-1 AGGAGTCTGGTTTG-1 
#>             "02"             "03"             "01"             "01"             "01" 
#> AGGAGTCTTGTCAG-1 AGGATAGACATTTC-1 AGGATAGAGGATTC-1 AGGATGCTACTAGC-1 AGGATGCTTTAGGC-1 
#>             "01"             "01"             "03"             "04"             "03" 
#> AGGCAACTGAAGGC-1 AGGCAGGAGTACCA-1 AGGCCTCTAGTCGT-1 AGGCCTCTCGGAGA-1 AGGCCTCTCGTAAC-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> AGGGACGACGTTGA-1 AGGGACGAGTCAAC-1 AGGGACGAGTTGTG-1 AGGGACGATAGAGA-1 AGGGACGATGCATG-1 
#>             "01"             "03"             "01"             "01"             "03" 
#> AGGGAGTGAGCCTA-1 AGGGCCACCATACG-1 AGGGCGCTAACCAC-1 AGGGCGCTATGGTC-1 AGGGTGGACAGTCA-1 
#>             "01"             "01"             "02"             "03"             "04" 
#> AGGGTGGACTCAAG-1 AGGGTGGAGTTGCA-1 AGGGTTTGTTCATC-1 AGGTCATGAGTGTC-1 AGGTCATGCTTATC-1 
#>             "02"             "03"             "02"             "04"             "01" 
#> AGGTCTGATTCTCA-1 AGGTGGGAAGAATG-1 AGGTGGGAAGTTCG-1 AGGTGTTGGTTACG-1 AGGTTCGAACCTCC-1 
#>             "02"             "01"             "01"             "04"             "02" 
#> AGGTTCGAACGTAC-1 AGGTTCGAGGGTGA-1 AGTAAGGAGTTTGG-1 AGTAAGGATTCTTG-1 AGTAATACATCACG-1 
#>             "02"             "01"             "01"             "01"             "03" 
#> AGTAATACCGAACT-1 AGTAATTGTCCCAC-1 AGTACGTGAGGGTG-1 AGTACGTGCTGCAA-1 AGTACGTGCTTGGA-1 
#>             "04"             "01"             "01"             "01"             "01" 
#> AGTACTCTACGTGT-1 AGTACTCTCAACCA-1 AGTACTCTCGGTAT-1 AGTAGGCTTGCCTC-1 AGTATAACTTGTCT-1 
#>             "04"             "03"             "01"             "02"             "02" 
#> AGTATCCTAGAACA-1 AGTCACGATGAGCT-1 AGTCAGACGAATAG-1 AGTCAGACGCTTAG-1 AGTCAGACTAGAGA-1 
#>             "01"             "03"             "01"             "01"             "03" 
#> AGTCAGACTGCACA-1 AGTCCAGATATCTC-1 AGTCCAGATTTCAC-1 AGTCGAACCAACCA-1 AGTCGCCTCCGTAA-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> AGTCTACTAGGGTG-1 AGTCTACTTGCATG-1 AGTCTTACACCACA-1 AGTCTTACTTCGCC-1 AGTCTTACTTCGGA-1 
#>             "02"             "02"             "01"             "01"             "03" 
#> AGTGACTGCAACTG-1 AGTGTTCTAACCTG-1 AGTGTTCTATAAGG-1 AGTGTTCTCACTTT-1 AGTTAAACCACTTT-1 
#>             "02"             "01"             "01"             "02"             "01" 
#> AGTTATGAACAGTC-1 AGTTATGACTGAGT-1 AGTTATGAGTTCAG-1 AGTTCTACCAGCTA-1 AGTTCTTGAAGCCT-1 
#>             "02"             "01"             "01"             "02"             "03" 
#> AGTTGTCTACTACG-1 AGTTTAGATGGTCA-1 AGTTTCACGGTCTA-1 AGTTTGCTACAGTC-1 AGTTTGCTACTGGT-1 
#>             "01"             "01"             "03"             "01"             "03" 
#> AGTTTGCTCCAAGT-1 ATAAACACAGTGCT-1 ATAAACACCACCAA-1 ATAACAACATGCTG-1 ATAACAACGTCTAG-1 
#>             "01"             "04"             "01"             "02"             "01" 
#> ATAACAACTTTGTC-1 ATAACATGTACTCT-1 ATAACCCTGTTGGT-1 ATAACCCTTGGTAC-1 ATAAGTACGAATGA-1 
#>             "01"             "01"             "01"             "01"             "04" 
#> ATAAGTTGGTACGT-1 ATAAGTTGTCTAGG-1 ATAATCGAGCTGAT-1 ATAATCGATGGTTG-1 ATAATGACCTACTT-1 
#>             "02"             "01"             "04"             "01"             "01" 
#> ATAATGACTCGTGA-1 ATACAATGTTAGGC-1 ATACCACTCGTACA-1 ATACCACTCTAAGC-1 ATACCACTGCCAAT-1 
#>             "02"             "01"             "02"             "02"             "03" 
#> ATACCGGAATGCTG-1 ATACCGGACATTTC-1 ATACCGGACTTCGC-1 ATACCGGAGGTGTT-1 ATACCGGATCTCGC-1 
#>             "02"             "02"             "01"             "02"             "01" 
#> ATACCTACGCATCA-1 ATACCTTGGGGCAA-1 ATACGGACAGACTC-1 ATACGGACCTACTT-1 ATACGGACGAGGTG-1 
#>             "01"             "01"             "02"             "02"             "04" 
#> ATACGGACTATGCG-1 ATACGGACTCTGGA-1 ATACGTCTTAACGC-1 ATACTCTGCTTCGC-1 ATACTCTGGTATGC-1 
#>             "04"             "02"             "02"             "02"             "03" 
#> ATAGATACCATGGT-1 ATAGATACGACGAG-1 ATAGATTGGTGTAC-1 ATAGCCGAACGGAG-1 ATAGCGTGCAGATC-1 
#>             "01"             "01"             "04"             "01"             "01" 
#> ATAGCGTGCCCTTG-1 ATAGCGTGGTATCG-1 ATAGCGTGTCTCTA-1 ATAGCTCTCTGATG-1 ATAGCTCTGAGGTG-1 
#>             "02"             "02"             "01"             "01"             "01" 
#> ATAGGAGAAACAGA-1 ATAGGCTGTCAGAC-1 ATAGTCCTAGTGTC-1 ATAGTCCTTGCATG-1 ATAGTCCTTGTCGA-1 
#>             "02"             "01"             "02"             "01"             "01" 
#> ATAGTTGACAACTG-1 ATAGTTGACCCTCA-1 ATAGTTGAGACGTT-1 ATAGTTGATAAGCC-1 ATATACGAAGCCAT-1 
#>             "01"             "02"             "01"             "01"             "01" 
#> ATATACGAATTGGC-1 ATATAGTGGAATGA-1 ATATGCCTAGATCC-1 ATATGCCTGGACAG-1 ATATGCCTTCTCTA-1 
#>             "01"             "02"             "02"             "01"             "01" 
#> ATATGCCTTGGTAC-1 ATCAAATGAGCCTA-1 ATCAAATGGGTAAA-1 ATCAACCTAAACGA-1 ATCAACCTGAGGAC-1 
#>             "01"             "02"             "02"             "01"             "01" 
#> ATCAACCTTCTCTA-1 ATCAACCTTTGTCT-1 ATCACACTTTGTCT-1 ATCACGGATTTCGT-1 ATCATCTGACACCA-1 
#>             "03"             "01"             "01"             "04"             "03" 
#> ATCATGCTAGAGTA-1 ATCATGCTGAACCT-1 ATCCAGGACGCTAA-1 ATCCAGGATGGAAA-1 ATCCATACTCCTTA-1 
#>             "03"             "04"             "02"             "01"             "02" 
#> ATCCATACTTCATC-1 ATCCCGTGCAGTCA-1 ATCCCGTGCATGCA-1 ATCCCGTGGCTGAT-1 ATCCGCACGCATCA-1 
#>             "02"             "03"             "04"             "04"             "04" 
#> ATCCTAACGACGGA-1 ATCCTAACGCTACA-1 ATCGACGAAACTGC-1 ATCGACGAATGACC-1 ATCGAGTGGACGTT-1 
#>             "04"             "03"             "02"             "01"             "03" 
#> ATCGCAGAATCTCT-1 ATCGCAGAGTGTCA-1 ATCGCCACTGAGGG-1 ATCGCCTGGGTCAT-1 ATCGCCTGTGGCAT-1 
#>             "02"             "04"             "03"             "01"             "04" 
#> ATCGCGCTCAGAGG-1 ATCGCGCTGGGATG-1 ATCGCGCTTTTCGT-1 ATCGGAACCAGTCA-1 ATCGGTGAGTCAAC-1 
#>             "02"             "01"             "04"             "01"             "01" 
#> ATCGGTGATTGCAG-1 ATCGTTTGCCTACC-1 ATCGTTTGGGTACT-1 ATCGTTTGTGCCAA-1 ATCTACACCCGCTT-1 
#>             "01"             "02"             "02"             "02"             "02" 
#> ATCTACACCGGGAA-1 ATCTCAACAGGAGC-1 ATCTCAACCTCGAA-1 ATCTCAACCTTGTT-1 ATCTGGGAAACCAC-1 
#>             "01"             "04"             "01"             "02"             "02" 
#> ATCTGGGAAGTGTC-1 ATCTGGGATTCCGC-1 ATCTGTTGAACGGG-1 ATCTGTTGACCTCC-1 ATCTGTTGCCTTCG-1 
#>             "02"             "01"             "01"             "01"             "02" 
#> ATCTGTTGGTTGCA-1 ATCTTGACACCAAC-1 ATCTTGACCTCCCA-1 ATCTTTCTGCATCA-1 ATCTTTCTGTTTCT-1 
#>             "01"             "01"             "02"             "01"             "01" 
#> ATCTTTCTTGTCCC-1 ATGAAACTCTGTGA-1 ATGAAACTGAGGCA-1 ATGAAGGAACAGCT-1 ATGAAGGACCTGTC-1 
#>             "03"             "01"             "01"             "03"             "04" 
#> ATGAAGGACCTTAT-1 ATGAAGGACTAGTG-1 ATGAAGGACTTGCC-1 ATGACGTGACGACT-1 ATGACGTGATCGGT-1 
#>             "04"             "04"             "03"             "04"             "02" 
#> ATGAGAGAAAGTGA-1 ATGAGAGAACGCAT-1 ATGAGAGAAGTAGA-1 ATGAGCACACAGCT-1 ATGAGCACATCTTC-1 
#>             "01"             "01"             "04"             "01"             "01" 
#> ATGATAACTTCACT-1 ATGATATGAAACAG-1 ATGATATGACTGGT-1 ATGATATGAGCACT-1 ATGATATGGTCATG-1 
#>             "03"             "01"             "01"             "01"             "01" 
#> ATGATATGGTGCTA-1 ATGATATGTTGTCT-1 ATGCACGAATGTCG-1 ATGCACGACTGTAG-1 ATGCACGAGAACCT-1 
#>             "03"             "02"             "04"             "01"             "04" 
#> ATGCACGAGTTCGA-1 ATGCACGATTGGTG-1 ATGCAGTGTTACCT-1 ATGCAGTGTTCTAC-1 ATGCCAGAACGACT-1 
#>             "01"             "02"             "04"             "01"             "01" 
#> ATGCCAGACAGTCA-1 ATGCCGCTTGAACC-1 ATGCGATGCTATGG-1 ATGCGATGCTGAGT-1 ATGCGATGGTTACG-1 
#>             "02"             "02"             "02"             "01"             "04" 
#> ATGCGCCTTCATTC-1 ATGCTTTGCGAATC-1 ATGCTTTGGGCGAA-1 ATGCTTTGTAGTCG-1 ATGGACACATCGGT-1 
#>             "01"             "01"             "01"             "04"             "01" 
#> ATGGACACGCATCA-1 ATGGGTACAACCTG-1 ATGGGTACATCGGT-1 ATGGGTACTATTCC-1 ATGGGTACTGGGAG-1 
#>             "03"             "04"             "03"             "01"             "01" 
#> ATGTAAACACCTCC-1 ATGTAAACCCGCTT-1 ATGTAAACGGGATG-1 ATGTAAACTCTCCG-1 ATGTAAACTTCACT-1 
#>             "01"             "01"             "02"             "01"             "02" 
#> ATGTACCTCAGTCA-1 ATGTACCTTAGTCG-1 ATGTACCTTTATCC-1 ATGTACCTTTCACT-1 ATGTCACTAATGCC-1 
#>             "01"             "01"             "02"             "03"             "02" 
#> ATGTCACTCTGCTC-1 ATGTCGGAGGTGAG-1 ATGTTCACAGTCTG-1 ATGTTCACCGTAGT-1 ATGTTGCTTTCAGG-1 
#>             "01"             "01"             "02"             "01"             "01" 
#> ATTAACGATGAGAA-1 ATTAACGATGCAAC-1 ATTAAGACTGCAGT-1 ATTACCTGCCTTAT-1 ATTACCTGGAGGAC-1 
#>             "03"             "03"             "01"             "02"             "02" 
#> ATTAGATGTTTCAC-1 ATTATGGAATCTCT-1 ATTCAAGAACGGGA-1 ATTCAAGACCTTTA-1 ATTCAGCTCATTGG-1 
#>             "01"             "01"             "01"             "01"             "03" 
#> ATTCCAACCATTGG-1 ATTCCAACTTAGGC-1 ATTCGACTCACTAG-1 ATTCGACTGAATAG-1 ATTCGACTTTTGTC-1 
#>             "02"             "03"             "03"             "02"             "02" 
#> ATTCGGGAAAGGCG-1 ATTCGGGATTAGGC-1 ATTCTTCTGATACC-1 ATTGAATGGACGGA-1 ATTGATGAAGGTTC-1 
#>             "02"             "01"             "01"             "01"             "01" 
#> ATTGATGACTGAGT-1 ATTGATGAGCGAAG-1 ATTGATGATCTATC-1 ATTGCACTGACGGA-1 ATTGCACTGAGAGC-1 
#>             "01"             "01"             "01"             "01"             "02" 
#> ATTGCACTGGAGCA-1 ATTGCACTTAGCCA-1 ATTGCACTTGCTTT-1 ATTGCTTGTTACTC-1 ATTGGTCTGACTAC-1 
#>             "02"             "01"             "02"             "04"             "04" 
#> ATTGGTCTTGTCTT-1 ATTGTAGATTCCCG-1 ATTGTAGATTGCAG-1 ATTGTCTGCGTACA-1 ATTTAGGAACCATG-1 
#>             "04"             "02"             "01"             "01"             "02" 
#> ATTTAGGACAGAGG-1 ATTTCCGAGATGAA-1 ATTTCCGAGTGCTA-1 ATTTCGTGTATGGC-1 ATTTCTCTACTTTC-1 
#>             "01"             "01"             "01"             "03"             "02" 
#> ATTTCTCTAGCAAA-1 ATTTCTCTCACTTT-1 ATTTCTCTTCCCAC-1 ATTTGCACAAGATG-1 CAAAGCACAGCTCA-1 
#>             "01"             "02"             "01"             "02"             "01" 
#> CAAAGCACCGTAAC-1 CAAAGCACGGTAAA-1 CAAAGCTGAAAGTG-1 CAAAGCTGTTGCTT-1 CAAATATGTGACAC-1 
#>             "04"             "03"             "01"             "02"             "01" 
#> CAAATTGAGGGCAA-1 CAAATTGATGGAGG-1 CAACCAGAAAAGTG-1 CAACCAGAAGTGCT-1 CAACCAGAGTTCAG-1 
#>             "01"             "02"             "01"             "01"             "02" 
#> CAACCAGATAGAAG-1 CAACCGCTGTTCAG-1 CAACCGCTTTGAGC-1 CAACGATGCGCAAT-1 CAACGTGACTCCAC-1 
#>             "02"             "01"             "01"             "02"             "02" 
#> CAACGTGAGCCATA-1 CAACGTGATCAAGC-1 CAAGAAGACCACAA-1 CAAGAAGACGTCTC-1 CAAGAAGATTCTAC-1 
#>             "03"             "02"             "03"             "02"             "01" 
#> CAAGACTGACCTGA-1 CAAGACTGAGTAGA-1 CAAGCTGACCATAG-1 CAAGCTGATCTATC-1 CAAGGACTGTTCAG-1 
#>             "04"             "04"             "02"             "03"             "01" 
#> CAAGGACTTCTTTG-1 CAAGGTTGCTCCAC-1 CAAGGTTGTCATTC-1 CAAGGTTGTCTGGA-1 CAAGTCGAAACAGA-1 
#>             "03"             "01"             "04"             "03"             "04" 
#> CAAGTCGATAGCGT-1 CAATAAACGCCATA-1 CAATAATGAACTGC-1 CAATATGACATGGT-1 CAATATGACCTTCG-1 
#>             "02"             "02"             "02"             "01"             "03" 
#> CAATATGACGTTAG-1 CAATATGAGGAGCA-1 CAATCGGAGAAACA-1 CAATCTACTGACTG-1 CAATTCACCCAACA-1 
#>             "01"             "01"             "01"             "03"             "03" 
#> CAATTCACGATAGA-1 CAATTCACTTGTGG-1 CAATTCTGCTTGTT-1 CAATTCTGGCGTAT-1 CACAACGATACGAC-1 
#>             "01"             "01"             "02"             "02"             "01" 
#> CACAATCTTGTTCT-1 CACAATCTTTCCAT-1 CACACCTGCTTGAG-1 CACACCTGTATGGC-1 CACAGAACCCTTGC-1 
#>             "01"             "01"             "01"             "01"             "04" 
#> CACAGAACCTGATG-1 CACAGATGGGATTC-1 CACAGATGGTTTCT-1 CACAGCCTGATACC-1 CACAGCCTTGCCAA-1 
#>             "01"             "01"             "02"             "01"             "02" 
#> CACAGCCTTGTAGC-1 CACAGTGATGAAGA-1 CACATACTACAGCT-1 CACATGGAACACGT-1 CACATGGAAGTCGT-1 
#>             "01"             "02"             "03"             "01"             "01" 
#> CACCACTGCCAACA-1 CACCACTGGCGAAG-1 CACCCATGTTCTGT-1 CACCGGGAATCGAC-1 CACCGGGACGAGAG-1 
#>             "01"             "03"             "03"             "01"             "03" 
#> CACCGGGACGTGTA-1 CACCGGGACTTCTA-1 CACCGGGACTTGCC-1 CACCGGGATTCGGA-1 CACCGTACTAAGGA-1 
#>             "01"             "03"             "03"             "03"             "04" 
#> CACCGTACTAGCGT-1 CACCTGACACCCAA-1 CACCTGACCAGAAA-1 CACCTGACCTCAAG-1 CACCTGACGAAAGT-1 
#>             "01"             "03"             "01"             "03"             "04" 
#> CACCTGACTCGTAG-1 CACGAAACTTCCGC-1 CACGACCTCGATAC-1 CACGCTACAGAAGT-1 CACGCTACTGTTCT-1 
#>             "01"             "04"             "04"             "01"             "04" 
#> CACGGGACAGAGTA-1 CACGGGACATAAGG-1 CACGGGACGTAGGG-1 CACGGGTGCTTCGC-1 CACGGGTGGAGGAC-1 
#>             "01"             "01"             "01"             "03"             "03" 
#> CACGGGTGTGTTTC-1 CACTAACTCCTAAG-1 CACTAACTGAAAGT-1 CACTAGGATGATGC-1 CACTATACCCCGTT-1 
#>             "01"             "04"             "01"             "04"             "04" 
#> CACTATACGTTTGG-1 CACTGAGACAGTCA-1 CACTGCACTTCATC-1 CACTGCTGAGACTC-1 CACTGCTGGAAAGT-1 
#>             "03"             "02"             "01"             "02"             "01" 
#> CACTTAACCGAATC-1 CACTTAACCGTACA-1 CACTTTGACTCTAT-1 CACTTTGAGCTGTA-1 CAGAAGCTCTCAAG-1 
#>             "01"             "04"             "03"             "01"             "01" 
#> CAGACATGAACGGG-1 CAGACATGTCGACA-1 CAGACCCTAAGGTA-1 CAGACCCTAATGCC-1 CAGACCCTAGGAGC-1 
#>             "01"             "01"             "02"             "01"             "01" 
#> CAGACTGAGTATGC-1 CAGATCGAATGTCG-1 CAGATCGACCTGAA-1 CAGATCGATATGGC-1 CAGATGACATTCTC-1 
#>             "01"             "04"             "01"             "01"             "03" 
#> CAGCAATGCCTTCG-1 CAGCAATGGAGGGT-1 CAGCAATGGTGCTA-1 CAGCAATGTCTACT-1 CAGCAATGTGACCA-1 
#>             "01"             "03"             "01"             "02"             "01" 
#> CAGCAATGTGAGGG-1 CAGCACCTAAGCCT-1 CAGCACCTAGGCGA-1 CAGCACCTGTAGGG-1 CAGCATGACAACCA-1 
#>             "02"             "01"             "01"             "02"             "02" 
#> CAGCATGAGACGTT-1 CAGCCTACCCAACA-1 CAGCCTTGCTACCC-1 CAGCCTTGGGGACA-1 CAGCGGACACCCTC-1 
#>             "01"             "01"             "02"             "01"             "01" 
#> CAGCGGACCTTTAC-1 CAGCGTCTAAAGCA-1 CAGCGTCTTATCGG-1 CAGCTAGATGTGAC-1 CAGCTCTGAGGCGA-1 
#>             "03"             "01"             "01"             "02"             "01" 
#> CAGCTCTGCAAGCT-1 CAGCTCTGTCGTAG-1 CAGCTCTGTGTGGT-1 CAGGAACTAACTGC-1 CAGGAACTCTCAGA-1 
#>             "03"             "02"             "03"             "01"             "02" 
#> CAGGCCGAACACCA-1 CAGGCCGAACACGT-1 CAGGCCGAACGACT-1 CAGGCCGAATCTCT-1 CAGGCCGACTAGCA-1 
#>             "01"             "01"             "01"             "02"             "04" 
#> CAGGGCACCATACG-1 CAGGGCACCCAACA-1 CAGGGCACTCCCGT-1 CAGGTAACAGACTC-1 CAGGTATGAGTCGT-1 
#>             "04"             "01"             "01"             "02"             "01" 
#> CAGGTATGTGCTTT-1 CAGGTTGAGGATCT-1 CAGTGATGGACGGA-1 CAGTGATGGCTAAC-1 CAGTGATGGGACAG-1 
#>             "01"             "04"             "04"             "03"             "01" 
#> CAGTGATGTAAGGA-1 CAGTGATGTACGCA-1 CAGTGTGATGTCAG-1 CAGTTACTAAGGTA-1 CAGTTACTGATAGA-1 
#>             "04"             "04"             "01"             "04"             "01" 
#> CAGTTGGAAAGAGT-1 CAGTTGGACATACG-1 CAGTTTACACACGT-1 CAGTTTACCCCAAA-1 CATAAAACGGAGCA-1 
#>             "02"             "01"             "03"             "01"             "02" 
#> CATAAATGAACTGC-1 CATAACCTTCTCCG-1 CATACTACCTCGAA-1 CATACTACCTGAAC-1 CATACTACGTACCA-1 
#>             "01"             "01"             "01"             "01"             "02" 
#> CATACTTGGGTTAC-1 CATAGTCTAATCGC-1 CATAGTCTCACTTT-1 CATATAGACTAAGC-1 CATATAGATCAGGT-1 
#>             "02"             "01"             "01"             "02"             "04" 
#> CATCAACTAGAAGT-1 CATCAACTCCCTCA-1 CATCAGGACTTCCG-1 CATCAGGATAGCCA-1 CATCAGGATCCTAT-1 
#>             "01"             "01"             "03"             "03"             "02" 
#> CATCAGGATGCACA-1 CATCAGGATTTCGT-1 CATCATACCGCATA-1 CATCATACGGAGCA-1 CATCATACTCAAGC-1 
#>             "02"             "02"             "02"             "04"             "01" 
#> CATCGCTGGGATCT-1 CATCGCTGTGGCAT-1 CATCGGCTATGCTG-1 CATCGGCTTTGGCA-1 CATCTCCTATGTGC-1 
#>             "01"             "04"             "01"             "01"             "04" 
#> CATCTCCTCGAACT-1 CATGAGACACGGGA-1 CATGAGACGTTGAC-1 CATGAGACTCGCCT-1 CATGCCACGGGTGA-1 
#>             "02"             "04"             "03"             "01"             "01" 
#> CATGCCACTGCCAA-1 CATGCGCTAGTCAC-1 CATGCGCTCAGATC-1 CATGCGCTTTGCAG-1 CATGGCCTAGGGTG-1 
#>             "01"             "02"             "02"             "02"             "02" 
#> CATGGCCTGTGCAT-1 CATGTACTATCGTG-1 CATGTTACAGTCGT-1 CATGTTACCTGAGT-1 CATGTTTGGGGATG-1 
#>             "01"             "03"             "03"             "01"             "02" 
#> CATTACACACGGAG-1 CATTACACCAACTG-1 CATTACACGGAGTG-1 CATTACACTACTCT-1 CATTAGCTCCACAA-1 
#>             "04"             "03"             "01"             "01"             "02" 
#> CATTGACTAGCGGA-1 CATTGGGACTCGAA-1 CATTGTACAGCGTT-1 CATTGTACTCGATG-1 CATTGTACTTATCC-1 
#>             "02"             "01"             "01"             "04"             "01" 
#> CATTGTACTTTGCT-1 CATTGTTGCTAGTG-1 CATTTCGACTCTAT-1 CATTTCGAGATACC-1 CATTTGACCACACA-1 
#>             "02"             "01"             "03"             "03"             "03" 
#> CATTTGACCCTGAA-1 CATTTGTGACGACT-1 CATTTGTGCATTGG-1 CATTTGTGCGGAGA-1 CATTTGTGGGATCT-1 
#>             "03"             "04"             "01"             "01"             "04" 
#> CCAAAGTGCTACGA-1 CCAAAGTGTGAGAA-1 CCAACCTGAAGTAG-1 CCAACCTGACGTAC-1 CCAACCTGTTCGCC-1 
#>             "02"             "02"             "03"             "02"             "02" 
#> CCAAGAACCCAATG-1 CCAAGAACGTAGCT-1 CCAAGAACGTGTCA-1 CCAAGAACTACTGG-1 CCAAGAACTCCTAT-1 
#>             "01"             "01"             "01"             "03"             "04" 
#> CCAAGATGTCATTC-1 CCAAGATGTTTCAC-1 CCAAGTGAGGAACG-1 CCAAGTGATCAAGC-1 CCAATTTGAACGTC-1 
#>             "01"             "01"             "01"             "01"             "02" 
#> CCACCATGAACGTC-1 CCACCATGATCGGT-1 CCACCATGGACGAG-1 CCACCATGGGGAGT-1 CCACCATGTCCTGC-1 
#>             "01"             "01"             "02"             "01"             "03" 
#> CCACTGACCCGCTT-1 CCACTGTGGGAAGC-1 CCACTGTGTGTAGC-1 CCACTTCTCGGGAA-1 CCAGAAACCCTGTC-1 
#>             "02"             "02"             "01"             "02"             "04" 
#> CCAGAAACGAACTC-1 CCAGAAACGGTCTA-1 CCAGACCTCTGAGT-1 CCAGACCTTGTGGT-1 CCAGCACTGCGATT-1 
#>             "01"             "01"             "04"             "01"             "02" 
#> CCAGCGGAAAGGCG-1 CCAGCGGACGACTA-1 CCAGCGGATGGGAG-1 CCAGCTACACAGTC-1 CCAGCTACCAGCTA-1 
#>             "02"             "02"             "01"             "01"             "04" 
#> CCAGGTCTACACCA-1 CCAGGTCTAGCATC-1 CCAGGTCTATGGTC-1 CCAGTCACACTGGT-1 CCAGTCACACTGTG-1 
#>             "04"             "02"             "01"             "02"             "04" 
#> CCAGTCACGTTGTG-1 CCAGTGCTAACCAC-1 CCAGTGCTCGTAGT-1 CCATCCGAAAGCAA-1 CCATCCGAACGACT-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> CCATCCGAAGGTTC-1 CCATCCGATTCGCC-1 CCATCGTGAACGGG-1 CCATCGTGCTAGAC-1 CCCAACACCTCGCT-1 
#>             "04"             "02"             "01"             "02"             "04" 
#> CCCAACACGCATCA-1 CCCAACACTTTGTC-1 CCCAACTGCAATCG-1 CCCAGACTGCCTTC-1 CCCAGACTGGTTTG-1 
#>             "01"             "02"             "02"             "02"             "04" 
#> CCCAGACTTTCGCC-1 CCCAGTTGCAGTTG-1 CCCAGTTGGGTACT-1 CCCAGTTGTCTATC-1 CCCGATTGTGTTTC-1 
#>             "02"             "02"             "01"             "04"             "01" 
#> CCCGGAGAAGGGTG-1 CCCTACGAATTGGC-1 CCCTAGTGCAAAGA-1 CCCTCAGACACTTT-1 CCCTCAGACGAGAG-1 
#>             "02"             "02"             "01"             "04"             "01" 
#> CCCTCAGAGGTCAT-1 CCCTGAACTAAAGG-1 CCCTGATGCAACCA-1 CCCTGATGCAAGCT-1 CCCTTACTAACCAC-1 
#>             "01"             "04"             "01"             "04"             "02" 
#> CCCTTACTGCAGTT-1 CCGAAAACCTTGTT-1 CCGACACTGGTTTG-1 CCGACTACCCAGTA-1 CCGACTACCGTGTA-1 
#>             "01"             "02"             "01"             "02"             "01" 
#> CCGACTACTGAGGG-1 CCGATAGACCTAAG-1 CCGATAGAGTTGGT-1 CCGCGAGACACACA-1 CCGCGAGAGGTTCA-1 
#>             "01"             "01"             "02"             "02"             "01" 
#> CCGCTATGGGACGA-1 CCGCTATGTGCAAC-1 CCGCTATGTGCACA-1 CCGGTACTGTCCTC-1 CCGTACACAAGCAA-1 
#>             "04"             "02"             "02"             "01"             "01" 
#> CCGTACACAGCGTT-1 CCGTACACGTCATG-1 CCGTACACGTTGGT-1 CCGTACACTAACGC-1 CCTAAACTTTCGTT-1 
#>             "04"             "03"             "02"             "01"             "01" 
#> CCTAAGGACCCAAA-1 CCTAAGGACTAGCA-1 CCTAAGGAGGGCAA-1 CCTAAGGATGATGC-1 CCTAAGGATGTCAG-1 
#>             "01"             "02"             "03"             "01"             "01" 
#> CCTACCGACTCTTA-1 CCTACCGAGGGATG-1 CCTAGAGAGGTGAG-1 CCTATAACCAAAGA-1 CCTATAACGAGACG-1 
#>             "01"             "04"             "04"             "01"             "02" 
#> CCTATAACTCAGAC-1 CCTATAACTGCATG-1 CCTCGAACACTTTC-1 CCTCGAACCCGTAA-1 CCTCGAACGTATCG-1 
#>             "01"             "02"             "03"             "02"             "01" 
#> CCTCGAACTTACTC-1 CCTCTACTCTTCGC-1 CCTCTACTGGCATT-1 CCTGACTGAAGTAG-1 CCTGACTGGGGAGT-1 
#>             "01"             "02"             "01"             "01"             "01" 
#> CCTGACTGTGTCTT-1 CCTGCAACACGTTG-1 CCTGGACTCGTGAT-1 CCTTAATGCCCAAA-1 CCTTAATGTTCTAC-1 
#>             "04"             "02"             "01"             "04"             "02" 
#> CCTTCACTACGACT-1 CCTTCACTCAGTCA-1 CCTTCACTGGAGTG-1 CCTTTAGATTCATC-1 CGAACATGCCCTAC-1 
#>             "01"             "04"             "02"             "02"             "02" 
#> CGAACATGTCAGAC-1 CGAAGACTGGAACG-1 CGAAGACTGTTACG-1 CGAAGGGAAACCTG-1 CGAAGGGATCCGAA-1 
#>             "01"             "01"             "01"             "03"             "04" 
#> CGAAGTACCAACTG-1 CGAATCGAGGAGCA-1 CGAATCGAGGAGGT-1 CGACAAACCCATAG-1 CGACAAACCGACAT-1 
#>             "04"             "02"             "01"             "01"             "04" 
#> CGACCACTAAAGTG-1 CGACCACTGCCAAT-1 CGACCGGAAGGTCT-1 CGACCGGATGGAAA-1 CGACCTTGCTAGTG-1 
#>             "03"             "03"             "01"             "01"             "01" 
#> CGACGTCTATCGTG-1 CGACGTCTCGTGTA-1 CGACGTCTGAGGCA-1 CGACTCACGTCGTA-1 CGACTCACGTTGCA-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> CGACTCTGTGTGAC-1 CGACTGCTTCCTCG-1 CGAGAACTAAGGCG-1 CGAGAACTACGTTG-1 CGAGAACTTGTTCT-1 
#>             "01"             "02"             "03"             "01"             "02" 
#> CGAGATTGGACACT-1 CGAGATTGGCCATA-1 CGAGCCGAACACCA-1 CGAGCCGAGGCGAA-1 CGAGCGTGCTCCAC-1 
#>             "03"             "03"             "01"             "01"             "01" 
#> CGAGCGTGGATACC-1 CGAGCGTGTATGCG-1 CGAGGAGACCTCCA-1 CGAGGAGATGTCGA-1 CGAGGCACCTATGG-1 
#>             "01"             "02"             "04"             "01"             "03" 
#> CGAGGCACTATGCG-1 CGAGGCACTCTTCA-1 CGAGGCTGACGCTA-1 CGAGGCTGGCAGTT-1 CGAGGGCTACGACT-1 
#>             "02"             "01"             "03"             "02"             "04" 
#> CGAGGGCTCGAATC-1 CGAGTATGTCACCC-1 CGATACGAACAGTC-1 CGATACGACAGGAG-1 CGATACGATTCACT-1 
#>             "01"             "02"             "02"             "03"             "04" 
#> CGATAGACCCGTAA-1 CGATAGACCGTACA-1 CGATAGACGTAGGG-1 CGATAGACTGTTCT-1 CGATCAGAAGAACA-1 
#>             "02"             "01"             "02"             "01"             "03" 
#> CGATCAGAGAGGGT-1 CGATCAGAGGTACT-1 CGATCAGATGTGAC-1 CGATCCACCGGGAA-1 CGATCCACTTCCAT-1 
#>             "01"             "01"             "02"             "03"             "04" 
#> CGCAAATGCTCGAA-1 CGCAACCTCCTTGC-1 CGCAACCTGGACGA-1 CGCACGGAGGACGA-1 CGCACGGATCTTTG-1 
#>             "01"             "01"             "01"             "04"             "01" 
#> CGCACTACAGAATG-1 CGCACTACAGCCAT-1 CGCACTACATTGGC-1 CGCACTACTCGCCT-1 CGCACTACTCGTGA-1 
#>             "01"             "01"             "01"             "04"             "01" 
#> CGCACTTGTCACGA-1 CGCAGGACAGATCC-1 CGCAGGACCTACTT-1 CGCAGGACTTGTCT-1 CGCAGGTGCACTGA-1 
#>             "02"             "01"             "01"             "02"             "01" 
#> CGCAGGTGCCATAG-1 CGCAGGTGGGAACG-1 CGCATAGATCACGA-1 CGCCATACTGCAAC-1 CGCCATTGAGAGGC-1 
#>             "02"             "01"             "02"             "01"             "01" 
#> CGCCATTGCTATGG-1 CGCCATTGGAGACG-1 CGCCATTGGAGCAG-1 CGCCATTGTACTGG-1 CGCCGAGAGCTTAG-1 
#>             "01"             "01"             "04"             "04"             "03" 
#> CGCCTAACGAATGA-1 CGCCTAACTGCTCC-1 CGCGAGACACAGCT-1 CGCGAGACAGGTCT-1 CGCGAGACGCTACA-1 
#>             "02"             "01"             "01"             "04"             "01" 
#> CGCGATCTCAGTCA-1 CGCGATCTGTTGAC-1 CGCGATCTTTCTTG-1 CGCGGATGGCCAAT-1 CGCTAAGAATGTCG-1 
#>             "02"             "02"             "04"             "01"             "01" 
#> CGCTAAGACAACTG-1 CGCTAAGACCCTTG-1 CGCTACTGAACAGA-1 CGCTACTGAGAACA-1 CGCTACTGTGAGCT-1 
#>             "01"             "01"             "02"             "01"             "01" 
#> CGCTACTGTTCCCG-1 CGCTCATGCATTTC-1 CGGAATTGGTTTGG-1 CGGAATTGTGGAGG-1 CGGACCGATGCGTA-1 
#>             "03"             "02"             "01"             "01"             "03" 
#> CGGACCGATGGGAG-1 CGGACTCTAAACAG-1 CGGACTCTCCAATG-1 CGGACTCTCCTCGT-1 CGGAGGCTATTCCT-1 
#>             "01"             "04"             "01"             "03"             "01" 
#> CGGAGGCTTGGATC-1 CGGATAACAACGAA-1 CGGATAACAGCTCA-1 CGGATAACTCAGTG-1 CGGCACGAACTCAG-1 
#>             "01"             "02"             "01"             "02"             "01" 
#> CGGCACGAAGGGTG-1 CGGCACGACTACGA-1 CGGCATCTTAGAAG-1 CGGCATCTTCGTAG-1 CGGCCAGAAAGGTA-1 
#>             "01"             "02"             "01"             "02"             "01" 
#> CGGCCAGAGAGGCA-1 CGGCGAACCAGTCA-1 CGGCGAACGACAAA-1 CGGCGAACGGTCTA-1 CGGCGAACTACTTC-1 
#>             "03"             "02"             "03"             "01"             "03" 
#> CGGGACTGCGTGTA-1 CGGGACTGGAATAG-1 CGGGCATGACCCAA-1 CGGGCATGTCTCTA-1 CGGGCATGTTGTGG-1 
#>             "01"             "03"             "03"             "03"             "01" 
#> CGGTAAACTCGCAA-1 CGGTCACTGTTTGG-1 CGGTCACTTACTTC-1 CGTAACGATCGCCT-1 CGTACCACACACAC-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> CGTACCACACGTTG-1 CGTACCACCTCATT-1 CGTACCACGGAGCA-1 CGTACCTGGCATCA-1 CGTAGCCTCTCTCG-1 
#>             "01"             "01"             "01"             "03"             "02" 
#> CGTAGCCTGCGAAG-1 CGTAGCCTGTATGC-1 CGTCAAGAAAGGTA-1 CGTCAAGAACGTGT-1 CGTCAAGACAGAGG-1 
#>             "01"             "02"             "02"             "01"             "01" 
#> CGTCAAGACAGGAG-1 CGTCCATGCTCTTA-1 CGTCGACTTTCCGC-1 CGTGATGACGCTAA-1 CGTGATGAGGTTCA-1 
#>             "03"             "01"             "01"             "01"             "01" 
#> CGTGCACTTATGGC-1 CGTGTAGAAAAACG-1 CGTGTAGACGATAC-1 CGTGTAGAGTTACG-1 CGTGTAGAGTTCAG-1 
#>             "02"             "01"             "03"             "03"             "02" 
#> CGTGTAGATTCGGA-1 CGTTAGGAAACCAC-1 CGTTAGGATCATTC-1 CGTTATACCCTGAA-1 CGTTTAACTGGTCA-1 
#>             "03"             "01"             "02"             "03"             "01" 
#> CTAAACCTCTGACA-1 CTAAACCTGTGCAT-1 CTAACACTAACGTC-1 CTAACACTAGTGCT-1 CTAACGGAACCGAT-1 
#>             "03"             "04"             "01"             "02"             "03" 
#> CTAACGGATTTCTG-1 CTAACTACGGCAAG-1 CTAAGGACACCATG-1 CTAAGGACCGTTAG-1 CTAAGGACGCCATA-1 
#>             "01"             "01"             "01"             "01"             "02" 
#> CTAAGGTGCCTAAG-1 CTAAGGTGTTGCAG-1 CTAAGGTGTTTCTG-1 CTAATAGAGCTATG-1 CTAATGCTTGTGGT-1 
#>             "04"             "01"             "01"             "01"             "02" 
#> CTACAACTCCCGTT-1 CTACCTCTCAACCA-1 CTACGCACACCTAG-1 CTACGCACTCTCCG-1 CTACGCACTGGTCA-1 
#>             "03"             "01"             "02"             "01"             "03" 
#> CTACGGCTTTCTTG-1 CTACTATGAACCAC-1 CTACTATGATGTGC-1 CTACTATGCTAAGC-1 CTACTATGTAAAGG-1 
#>             "02"             "02"             "02"             "01"             "04" 
#> CTACTCCTATGTCG-1 CTACTCCTGCCATA-1 CTAGAGACACTTTC-1 CTAGAGACAGCATC-1 CTAGAGACTTTGGG-1 
#>             "03"             "02"             "01"             "03"             "02" 
#> CTAGATCTCTCTAT-1 CTAGATCTTCGACA-1 CTAGGATGAGCCTA-1 CTAGGATGATCGTG-1 CTAGGCCTCTCAGA-1 
#>             "01"             "01"             "04"             "04"             "01" 
#> CTAGGTGATGGTTG-1 CTAGTTACCAGAGG-1 CTAGTTACCGCATA-1 CTAGTTACGAAACA-1 CTATAAGATCGTTT-1 
#>             "02"             "01"             "01"             "03"             "04" 
#> CTATACTGAGGTTC-1 CTATACTGCCAGTA-1 CTATACTGCGCTAA-1 CTATACTGCTACGA-1 CTATACTGTCTCAT-1 
#>             "02"             "01"             "02"             "03"             "03" 
#> CTATACTGTTCGTT-1 CTATAGCTGTCACA-1 CTATAGCTTCGCTC-1 CTATAGCTTGCCTC-1 CTATCAACGAACTC-1 
#>             "01"             "01"             "02"             "02"             "01" 
#> CTATCAACGCAGAG-1 CTATCAACTTTGGG-1 CTATCCCTCCACCT-1 CTATGTACGAGAGC-1 CTATGTACGCTTAG-1 
#>             "01"             "01"             "02"             "01"             "01" 
#> CTATGTACTGTTTC-1 CTATGTTGAAAGCA-1 CTATGTTGTCCTCG-1 CTATGTTGTCTCGC-1 CTATTGACAAACGA-1 
#>             "04"             "01"             "01"             "01"             "02" 
#> CTATTGACACTGGT-1 CTATTGACGGTGAG-1 CTATTGTGGCAAGG-1 CTCAATTGGTTCAG-1 CTCAATTGGTTGCA-1 
#>             "02"             "02"             "01"             "01"             "02" 
#> CTCAGAGATAGAAG-1 CTCAGCACTCTAGG-1 CTCAGCACTGAACC-1 CTCAGCACTTGCAG-1 CTCAGCTGAACCTG-1 
#>             "01"             "01"             "02"             "01"             "02" 
#> CTCAGCTGCAGTTG-1 CTCAGGCTCGTTGA-1 CTCAGGCTGCTAAC-1 CTCATTGACCTTAT-1 CTCATTGATGCTTT-1 
#>             "01"             "02"             "01"             "01"             "02" 
#> CTCCACGAGAGATA-1 CTCCATCTCTTAGG-1 CTCCATCTGACGAG-1 CTCCGAACAAGTGA-1 CTCCTACTGCCTTC-1 
#>             "02"             "01"             "01"             "02"             "02" 
#> CTCGAAGATGTGGT-1 CTCGAAGATTAGGC-1 CTCGACTGCTCTAT-1 CTCGACTGGGTGAG-1 CTCGACTGGTTGAC-1 
#>             "01"             "02"             "01"             "01"             "03" 
#> CTCGAGCTCTGGAT-1 CTCGCATGACTTTC-1 CTCGCATGCTTAGG-1 CTCTAAACCTCGAA-1 CTCTAAACGGCGAA-1 
#>             "03"             "01"             "01"             "01"             "01" 
#> CTCTAATGTCCAAG-1 CTGAACGACAGTCA-1 CTGAACGATGAGGG-1 CTGAAGACCCAACA-1 CTGAAGACGTGCAT-1 
#>             "02"             "01"             "01"             "01"             "04" 
#> CTGAAGTGAAGCCT-1 CTGAAGTGCAGCTA-1 CTGAAGTGGCTATG-1 CTGAAGTGTCCAGA-1 CTGAATCTGAATAG-1 
#>             "02"             "04"             "01"             "01"             "01" 
#> CTGACAGAATCGTG-1 CTGACCACAGCAAA-1 CTGAGAACCGGGAA-1 CTGAGAACGTAAAG-1 CTGATACTAGTAGA-1 
#>             "03"             "01"             "01"             "03"             "01" 
#> CTGATTTGGTGTTG-1 CTGCAGCTAACCGT-1 CTGCAGCTGACACT-1 CTGCAGCTGGATTC-1 CTGCAGCTTGGCAT-1 
#>             "02"             "01"             "01"             "02"             "01" 
#> CTGCCAACAGGAGC-1 CTGCCAACCAGCTA-1 CTGCCAACTAACCG-1 CTGCCAACTGCTCC-1 CTGCCAACTTGCAG-1 
#>             "01"             "01"             "02"             "03"             "01" 
#> CTGCCAACTTGCTT-1 CTGCGACTCCACCT-1 CTGGAAACAAACGA-1 CTGGAAACATCGAC-1 CTGGATGACTGGAT-1 
#>             "01"             "03"             "03"             "01"             "03" 
#> CTGGATGACTTGTT-1 CTGGATGATGTGAC-1 CTGGCACTCAAGCT-1 CTGTAACTAACCAC-1 CTGTAACTAGCGTT-1 
#>             "01"             "04"             "02"             "01"             "01" 
#> CTGTATACGTAAAG-1 CTGTATACGTACGT-1 CTGTATACGTTGGT-1 CTGTGAGACAACCA-1 CTGTGAGACCTTGC-1 
#>             "01"             "02"             "01"             "02"             "03" 
#> CTGTGAGACGAACT-1 CTGTGAGACTGTAG-1 CTTAAAGAACCTGA-1 CTTAACACCTGTAG-1 CTTAACACTATCGG-1 
#>             "02"             "02"             "01"             "01"             "04" 
#> CTTAAGCTACCTAG-1 CTTAAGCTAGTACC-1 CTTAAGCTCATCAG-1 CTTAAGCTCCGCTT-1 CTTACAACTAACGC-1 
#>             "01"             "01"             "01"             "04"             "01" 
#> CTTACAACTCCCGT-1 CTTACTGACGTACA-1 CTTAGACTAAACGA-1 CTTAGGGACTTGCC-1 CTTAGGGAGAATCC-1 
#>             "02"             "01"             "01"             "01"             "01" 
#> CTTATCGACTCATT-1 CTTCACCTACCTGA-1 CTTCATGAAGCATC-1 CTTCATGAAGTACC-1 CTTCATGACCGAAT-1 
#>             "01"             "02"             "04"             "01"             "01" 
#> CTTGAACTACGCAT-1 CTTGATTGAGGTTC-1 CTTGATTGATCTTC-1 CTTGATTGCATTCT-1 CTTGATTGTTTCGT-1 
#>             "01"             "03"             "02"             "01"             "01" 
#> CTTGTATGACACCA-1 CTTGTATGCGCAAT-1 CTTTACGAGCGAAG-1 CTTTAGACCGTGAT-1 CTTTAGACGAGACG-1 
#>             "04"             "04"             "01"             "01"             "01" 
#> CTTTAGACGATACC-1 CTTTAGACGTTGGT-1 CTTTAGACTCATTC-1 CTTTAGTGACGGGA-1 CTTTAGTGGGTGGA-1 
#>             "01"             "01"             "01"             "03"             "01" 
#> CTTTCAGAGAAACA-1 CTTTGATGAGCACT-1 CTTTGATGTCTAGG-1 CTTTGATGTGTCCC-1 CTTTGATGTGTGGT-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> GAAACAGAACTACG-1 GAAACAGAATCACG-1 GAAACAGACATTCT-1 GAAACCTGATCGTG-1 GAAACCTGATGCCA-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> GAAACCTGCTTATC-1 GAAACCTGGACTAC-1 GAAACCTGTGCTAG-1 GAAAGATGATTTCC-1 GAAAGATGCTGATG-1 
#>             "01"             "02"             "01"             "01"             "02" 
#> GAAAGATGCTTCGC-1 GAAAGATGTAAGGA-1 GAAAGCCTACGTTG-1 GAAAGTGAAAGTGA-1 GAAAGTGACCACAA-1 
#>             "02"             "01"             "04"             "02"             "02" 
#> GAAAGTGACTCAAG-1 GAAATACTACCAAC-1 GAAATACTCTTAGG-1 GAAATACTTCCTCG-1 GAACACACGTGCAT-1 
#>             "01"             "02"             "04"             "03"             "02" 
#> GAACACACTGCCTC-1 GAACAGCTAACTGC-1 GAACAGCTCTCAGA-1 GAACCAACCACAAC-1 GAACCAACTTCCGC-1 
#>             "01"             "02"             "02"             "01"             "03" 
#> GAACCTGAACGTGT-1 GAACCTGAGAGACG-1 GAACCTGATGAACC-1 GAACGGGATACTTC-1 GAACTGTGACCTGA-1 
#>             "01"             "01"             "01"             "01"             "02" 
#> GAACTGTGCCAGTA-1 GAAGAATGCAATCG-1 GAAGCGGACCTATT-1 GAAGCTACGAATGA-1 GAAGCTACGGTTTG-1 
#>             "02"             "01"             "02"             "02"             "03" 
#> GAAGGGTGAAAGTG-1 GAAGGGTGCTTAGG-1 GAAGGTCTGAAAGT-1 GAAGGTCTGTTGCA-1 GAAGGTCTTAAAGG-1 
#>             "01"             "02"             "03"             "01"             "02" 
#> GAAGTAGACTCCCA-1 GAAGTAGATCCAAG-1 GAAGTCACCCTCGT-1 GAAGTCACCCTGTC-1 GAAGTCTGTCGCAA-1 
#>             "03"             "02"             "02"             "04"             "04" 
#> GAAGTCTGTTCTGT-1 GAAGTGCTAAACGA-1 GAAGTGCTCCGCTT-1 GAAGTGCTTAACCG-1 GAATGCACCCTAAG-1 
#>             "01"             "03"             "02"             "01"             "01" 
#> GAATGCACCTTCGC-1 GAATGCTGCGGTAT-1 GAATTAACGATAAG-1 GAATTAACGGTCAT-1 GAATTAACGTCGTA-1 
#>             "03"             "01"             "01"             "01"             "03" 
#> GAATTAACTGAAGA-1 GACAACACAGGCGA-1 GACAACACATCGTG-1 GACAACACTCGCCT-1 GACAACTGAGGTTC-1 
#>             "04"             "01"             "01"             "01"             "01" 
#> GACAGGGAAGAGTA-1 GACAGGGAATGCCA-1 GACAGTACGAGCTT-1 GACAGTACTTCGGA-1 GACAGTTGAGTAGA-1 
#>             "04"             "01"             "02"             "02"             "04" 
#> GACATTCTCCACCT-1 GACCAAACGACTAC-1 GACCAAACGTATCG-1 GACCCTACTAAAGG-1 GACCTAGACCTCAC-1 
#>             "02"             "02"             "02"             "04"             "01" 
#> GACCTAGACGAGAG-1 GACCTCACAAGGTA-1 GACCTCACGTACGT-1 GACCTCTGCATCAG-1 GACGAACTCCCACT-1 
#>             "01"             "01"             "02"             "01"             "01" 
#> GACGATTGCCAATG-1 GACGCCGACCTTCG-1 GACGCTCTCTCTCG-1 GACGGCACACGGGA-1 GACGGCACGAGATA-1 
#>             "04"             "01"             "03"             "03"             "02" 
#> GACGTAACCTATGG-1 GACGTAACCTGTGA-1 GACGTAACTATGGC-1 GACGTATGTTGACG-1 GACGTATGTTTGCT-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> GACGTCCTACGGAG-1 GACGTCCTCTCAAG-1 GACGTCCTGATAAG-1 GACTACGATGGTCA-1 GACTCCTGCTCGCT-1 
#>             "01"             "02"             "04"             "04"             "01" 
#> GACTCCTGGGTTAC-1 GACTCCTGTTATCC-1 GACTCCTGTTGGTG-1 GACTGAACCAATCG-1 GACTGATGTGATGC-1 
#>             "01"             "01"             "02"             "02"             "01" 
#> GACTTTACATGCCA-1 GACTTTACGACAGG-1 GAGAAATGTTCTCA-1 GAGATAGAAAAAGC-1 GAGATCACGACAAA-1 
#>             "01"             "04"             "04"             "02"             "02" 
#> GAGATGCTCTGGAT-1 GAGATGCTGAATGA-1 GAGCAGGATTCCCG-1 GAGCATACTTTGCT-1 GAGCGCACGCGTAT-1 
#>             "03"             "01"             "03"             "02"             "02" 
#> GAGCGCACGGTGAG-1 GAGCGCTGAAGATG-1 GAGCGCTGTCTTAC-1 GAGCGGCTGGGAGT-1 GAGGACGACTCAGA-1 
#>             "01"             "03"             "02"             "04"             "01" 
#> GAGGATCTGAAAGT-1 GAGGCAGACTTGCC-1 GAGGGAACACCAGT-1 GAGGGAACGAGGGT-1 GAGGGATGGGAAAT-1 
#>             "04"             "03"             "01"             "01"             "01" 
#> GAGGGCCTTCACCC-1 GAGGGTGAAGAGTA-1 GAGGTACTACGGTT-1 GAGGTACTACTCAG-1 GAGGTACTGACACT-1 
#>             "01"             "01"             "01"             "02"             "03" 
#> GAGGTACTGGGAGT-1 GAGGTACTTAGCGT-1 GAGGTGGAGTACGT-1 GAGGTGGATCCTCG-1 GAGGTTACTCGTTT-1 
#>             "01"             "02"             "01"             "03"             "02" 
#> GAGGTTTGTAAGCC-1 GAGTCAACCATTCT-1 GAGTCAACGGGAGT-1 GAGTCTGATCGTGA-1 GAGTCTGATTTGGG-1 
#>             "02"             "01"             "01"             "01"             "04" 
#> GAGTGACTCAGCTA-1 GAGTGACTCGGTAT-1 GAGTGACTCTTGCC-1 GAGTGACTGACTAC-1 GAGTGACTGTCTAG-1 
#>             "03"             "03"             "04"             "04"             "01" 
#> GAGTGGGAGTCTTT-1 GAGTGGGATGCCCT-1 GAGTGGGATGCTGA-1 GAGTGTTGCTGTAG-1 GAGTGTTGTGGTCA-1 
#>             "04"             "01"             "04"             "01"             "01" 
#> GAGTTGTGCATGGT-1 GAGTTGTGCTGAGT-1 GAGTTGTGGCGAGA-1 GAGTTGTGGTAGCT-1 GAGTTGTGTATGCG-1 
#>             "02"             "03"             "02"             "03"             "02" 
#> GATAAGGAGAAACA-1 GATAAGGATTCACT-1 GATACTCTATCGGT-1 GATACTCTTACTTC-1 GATACTCTTGACTG-1 
#>             "02"             "02"             "01"             "01"             "02" 
#> GATAGAGAAGGGTG-1 GATAGAGACTGTGA-1 GATAGAGATCACGA-1 GATAGCACCCATAG-1 GATAGCACGAAGGC-1 
#>             "03"             "01"             "02"             "01"             "02" 
#> GATAGCACTTGTCT-1 GATATAACAAGGTA-1 GATATAACACGCAT-1 GATATATGCTGGAT-1 GATATATGTCCGTC-1 
#>             "01"             "01"             "01"             "01"             "03" 
#> GATATATGTGGAGG-1 GATATCCTAGAAGT-1 GATATCCTCCCGTT-1 GATATTGACAGGAG-1 GATATTGACGAGTT-1 
#>             "02"             "01"             "02"             "03"             "02" 
#> GATATTGAGCCAAT-1 GATCCCTGACCTTT-1 GATCCCTGTGTAGC-1 GATCCGCTGGTCAT-1 GATCGAACCGAGAG-1 
#>             "01"             "03"             "03"             "02"             "01" 
#> GATCGATGACTAGC-1 GATCGATGGTAAAG-1 GATCGATGTAAGGA-1 GATCGTGACACTAG-1 GATCGTGATTCACT-1 
#>             "04"             "04"             "02"             "01"             "01" 
#> GATCTACTGGTGAG-1 GATCTACTTTGCAG-1 GATCTTACACCCAA-1 GATCTTACCCTACC-1 GATCTTACGAATAG-1 
#>             "01"             "04"             "02"             "01"             "02" 
#> GATCTTACGAGATA-1 GATGCAACTCCAGA-1 GATGCCCTACGTAC-1 GATGCCCTCTCATT-1 GATGCCCTGGCAAG-1 
#>             "02"             "01"             "01"             "01"             "02" 
#> GATGCCCTTTTGCT-1 GATTACCTTGTTCT-1 GATTCGGAACGACT-1 GATTCGGACAGGAG-1 GATTCGGAGAAGGC-1 
#>             "01"             "01"             "01"             "02"             "02" 
#> GATTCTTGATTCGG-1 GATTCTTGCCGATA-1 GATTCTTGCGAGTT-1 GATTGGACCCGTTC-1 GATTGGACGGTGTT-1 
#>             "02"             "01"             "04"             "04"             "04" 
#> GATTGGACTTTCGT-1 GATTGGTGTGTCAG-1 GATTTAGACACTCC-1 GATTTAGACTAAGC-1 GATTTAGATTCGTT-1 
#>             "04"             "01"             "02"             "04"             "02" 
#> GATTTGCTAACGAA-1 GATTTGCTAACGGG-1 GCAACCCTCCTCGT-1 GCAACTGATTGCGA-1 GCAAGACTACTGGT-1 
#>             "01"             "02"             "02"             "01"             "01" 
#> GCAAGACTAGGTCT-1 GCAAGACTCCCTTG-1 GCAATCGACTGCAA-1 GCAATCGAGACGTT-1 GCAATCGATCCTTA-1 
#>             "01"             "01"             "01"             "02"             "02" 
#> GCAATTCTCGTGTA-1 GCAATTCTTCTCCG-1 GCACAAACAATGCC-1 GCACAAACGGTACT-1 GCACAATGGTGCAT-1 
#>             "01"             "01"             "01"             "01"             "02" 
#> GCACACCTGTGCTA-1 GCACCACTCATGAC-1 GCACCACTGTTTGG-1 GCACCACTTCCTTA-1 GCACCACTTTCGGA-1 
#>             "03"             "02"             "02"             "03"             "02" 
#> GCACCTACGCGATT-1 GCACCTTGGCTGTA-1 GCACCTTGGGGAGT-1 GCACGGACCAGCTA-1 GCACGGTGACCTCC-1 
#>             "01"             "01"             "02"             "01"             "01" 
#> GCACGGTGCTATGG-1 GCACTAGAACGGGA-1 GCACTAGAAGATGA-1 GCACTAGACCTTTA-1 GCACTAGACGTAAC-1 
#>             "02"             "01"             "04"             "02"             "04" 
#> GCACTAGAGTCGTA-1 GCACTAGATGCAAC-1 GCACTGCTGAGGCA-1 GCAGATACAGCGTT-1 GCAGATACGACGGA-1 
#>             "03"             "01"             "01"             "01"             "01" 
#> GCAGATACGCAGAG-1 GCAGCCGACAGTCA-1 GCAGCGTGCACTCC-1 GCAGCTCTCAATCG-1 GCAGCTCTGTTTCT-1 
#>             "01"             "01"             "01"             "01"             "01" 
#> GCAGGGCTAAGAAC-1 GCAGGGCTAAGGGC-1 GCAGGGCTATCGAC-1 GCAGGGCTTGGGAG-1 GCAGTCCTAACTGC-1 
#>             "01"             "01"             "03"             "03"             "01" 
#> GCAGTCCTCTCTTA-1 GCATCAGATGCGTA-1 GCATGTGACAAGCT-1 GCATTGGAGAAGGC-1 GCCAAAACGAGGCA-1 
#>             "01"             "01"             "01"             "01"             "03" 
#> GCCAAATGATCGAC-1 GCCAACCTACGGTT-1 GCCAACCTCGCCTT-1 GCCACGGAGGCGAA-1 GCCACGGATACTGG-1 
#>             "01"             "01"             "01"             "02"             "01" 
#> GCCACTACGTCTTT-1 GCCCAACTACCGAT-1 GCCCAACTATGGTC-1 GCCCATACAGCGTT-1 GCCGACGAACTCTT-1 
#>             "01"             "01"             "03"             "03"             "02" 
#> GCCGAGTGCGTTGA-1 GCCGGAACGAACTC-1 GCCGGAACGTTCTT-1 GCCGGAACTGCACA-1 GCCGGAACTTACTC-1 
#>             "01"             "03"             "03"             "03"             "01" 
#> GCCGTACTACCTGA-1 GCCGTACTGGCAAG-1 GCCTACACAGTTCG-1 GCCTACACCACTGA-1 GCCTACACCTTGAG-1 
#>             "01"             "02"             "03"             "02"             "01" 
#> GCCTAGCTACGGAG-1 GCCTAGCTCTATTC-1 GCCTAGCTTCTCAT-1 GCCTAGCTTCTCTA-1 GCCTCAACCATGGT-1 
#>             "04"             "01"             "01"             "02"             "01" 
#> GCCTCAACTCTTTG-1 GCCTCATGTCTTAC-1 GCCTGACTCTCAAG-1 GCGAAGGAACTCTT-1 GCGAAGGATGCCAA-1 
#>             "03"             "01"             "02"             "01"             "01" 
#> GCGAGAGAGGGACA-1 GCGAGCACTGTCGA-1 GCGAGCACTTGACG-1 GCGAGCACTTGCTT-1 GCGATATGGTACGT-1 
#>             "01"             "04"             "01"             "02"             "01" 
#> GCGATATGGTGTTG-1 GCGCACGAAGTCGT-1 GCGCACGACTTTAC-1 GCGCATCTAGGTCT-1 GCGCATCTGGTTAC-1 
#>             "01"             "01"             "02"             "01"             "01" 
#> GCGCATCTTCGATG-1 GCGCATCTTGCTCC-1 GCGCATCTTTCTAC-1 GCGCGAACGTTCTT-1 GCGCGATGAACGGG-1 
#>             "01"             "03"             "01"             "04"             "01" 
#> GCGCGATGGTGCAT-1 GCGGAGCTCCTGAA-1 GCGGCAACCCGATA-1 GCGGCAACGGAGGT-1 GCGGCAACTGTCGA-1 
#>             "03"             "01"             "01"             "04"             "02" 
#> GCGTAAACACGGTT-1 GCGTAATGCACCAA-1 GCGTATGAACACCA-1 GCGTATGATGAGAA-1 GCTACAGAAAGGTA-1 
#>             "02"             "02"             "01"             "02"             "01" 
#> GCTACAGAATCTTC-1 GCTACCTGAGAAGT-1 GCTACCTGATCACG-1 GCTACGCTAGAATG-1 GCTACGCTAGCTAC-1 
#>             "04"             "02"             "01"             "01"             "01" 
#> GCTACGCTCCCTAC-1 GCTAGAACAGAGGC-1 GCTAGAACGGATCT-1 GCTAGAACTCCCGT-1 GCTAGATGAGCTCA-1 
#>             "01"             "04"             "01"             "01"             "02" 
#> GCTAGATGGCGATT-1 GCTATACTAAGGCG-1 GCTATACTAGCGTT-1 GCTATACTCTCTTA-1 GCTATACTGGACGA-1 
#>             "03"             "01"             "03"             "01"             "01" 
#> GCTCAAGAACCATG-1 GCTCAAGAAGTCAC-1 GCTCAGCTGTCTAG-1 GCTCCATGAGAAGT-1 GCTCCATGCCGAAT-1 
#>             "02"             "02"             "01"             "03"             "01" 
#> GCTCGACTCTAGTG-1 GCTGATGAGGTATC-1 GCTTAACTACAGTC-1 GCTTAACTACTGGT-1 GCTTAACTGCTGAT-1 
#>             "02"             "02"             "02"             "03"             "01" 
#> GCTTAACTTAGACC-1 GCTTAACTTCAGTG-1 GGAACACTCACTTT-1 GGAACACTTCAGAC-1 GGAACTACTACTTC-1 
#>             "02"             "01"             "02"             "03"             "01" 
#> GGAACTTGAAGGTA-1 GGAACTTGAGAATG-1 GGAACTTGCTCCAC-1 GGAACTTGGGTAGG-1 GGAAGGACATCGGT-1 
#>             "02"             "01"             "02"             "04"             "02" 
#> GGAAGGACCACTAG-1 GGAAGGACGAGGGT-1 GGAAGGACGCGAAG-1 GGAAGGTGGCGAGA-1 GGAATCTGAAGGGC-1 
#>             "01"             "01"             "01"             "03"             "01" 
#> GGAATCTGAGGAGC-1 GGAATCTGCTTAGG-1 GGAATCTGCTTGTT-1 GGAATCTGGGAGGT-1 GGAATGCTTTCTAC-1 
#>             "01"             "04"             "02"             "01"             "01" 
#> GGACAGGAAAGGGC-1 GGACAGGAGTGCTA-1 GGACAGGATCTCGC-1 GGACCCGAAGCTAC-1 GGACCGTGCTTACT-1 
#>             "01"             "04"             "01"             "02"             "02" 
#> GGACCGTGGGAACG-1 GGACCGTGTAACGC-1 GGACCTCTGTAAGA-1 GGACCTCTTTTCTG-1 GGACGAGAGTGTCA-1 
#>             "02"             "01"             "02"             "03"             "02" 
#> GGACGCTGACGCAT-1 GGACGCTGCTAGCA-1 GGACGCTGTCCTCG-1 GGAGAGACGTGAGG-1 GGAGCAGATTCAGG-1 
#>             "01"             "01"             "03"             "01"             "04" 
#> GGAGCCACCTTCTA-1 GGAGCGCTACGCAT-1 GGAGCGCTCCGAAT-1 GGAGGATGCCACCT-1 GGAGGATGGTTGAC-1 
#>             "04"             "02"             "01"             "01"             "02" 
#> GGAGGATGTCAGTG-1 GGAGGCCTCGTTGA-1 GGAGGCCTTTCTTG-1 GGAGGTGATACGCA-1 GGAGGTGATCGCTC-1 
#>             "02"             "03"             "01"             "01"             "01" 
#> GGATACTGCAGCTA-1 GGATACTGTCTAGG-1 GGATAGCTCGTCTC-1 GGATAGCTCTGAAC-1 GGATGTACCAAAGA-1 
#>             "01"             "01"             "01"             "01"             "04" 
#> GGATGTACGCGAAG-1 GGATGTACGTCTTT-1 GGATGTACGTGTCA-1 GGATTTCTAGGTTC-1 GGATTTCTTTGTCT-1 
#>             "01"             "02"             "03"             "01"             "02" 
#> GGCAAGGAAAAAGC-1 GGCAAGGAAGAAGT-1 GGCAAGGACTTGGA-1 GGCAAGGAGGACTT-1 GGCAATACGCTAAC-1 
#>             "03"             "01"             "02"             "01"             "04" 
#> GGCAATACGGCATT-1 GGCAATACGTTTCT-1 GGCACGTGGCTTAG-1 GGCACTCTTTTGTC-1 GGCATATGCTTATC-1 
#>             "01"             "04"             "02"             "01"             "03" 
#> GGCATATGGGGAGT-1 GGCATATGTGTGAC-1 GGCCACGACAGAGG-1 GGCCAGACTGGTTG-1 GGCCCAGAAAGTAG-1 
#>             "03"             "01"             "01"             "01"             "02" 
#> GGCCGAACAACGAA-1 GGCCGAACGCAGAG-1 GGCCGAACGTAGGG-1 GGCCGAACTCTAGG-1 GGCCGATGCAGGAG-1 
#>             "01"             "01"             "01"             "03"             "01" 
#> GGCCGATGCCGAAT-1 GGCCGATGTACTCT-1 GGCGACACTGCCCT-1 GGCGACTGCGTAAC-1 GGCGCATGCCTAAG-1 
#>             "01"             "01"             "03"             "01"             "02" 
#> GGCGCATGCTCCAC-1 GGCGCATGTGGAAA-1 GGCGGACTAGAGGC-1 GGCGGACTAGGAGC-1 GGCGGACTCTGACA-1 
#>             "01"             "01"             "01"             "03"             "01" 
#> GGCGGACTCTTGGA-1 GGCGGACTTACTGG-1 GGCGGACTTGAACC-1 GGCTAAACACCTGA-1 GGCTAAACTCTTAC-1 
#>             "03"             "01"             "01"             "03"             "01" 
#> GGCTAATGAGCACT-1 GGCTAATGGTCTAG-1 GGCTCACTACTCAG-1 GGGAACGAAGCTCA-1 GGGAACGACACAAC-1 
#>             "03"             "01"             "02"             "02"             "04" 
#> GGGAACGAGTGTCA-1 GGGAAGTGTTGAGC-1 GGGACCACACGTTG-1 GGGACCACAGAACA-1 GGGACCACGAATAG-1 
#>             "02"             "02"             "03"             "01"             "01" 
#> GGGACCACGTCATG-1 GGGACCACTCAAGC-1 GGGACCACTCGTGA-1 GGGACCACTGCATG-1 GGGACCTGACCCTC-1 
#>             "01"             "01"             "01"             "01"             "02" 
#> GGGACCTGCTTGCC-1 GGGACCTGTGGAGG-1 GGGATGGACGACAT-1 GGGATGGATACTTC-1 GGGATGGATGGTTG-1 
#>             "01"             "04"             "04"             "01"             "02" 
#> GGGATTACGTCTAG-1 GGGCAAGATGCATG-1 GGGCACACGGTGAG-1 GGGCACACGTTGCA-1 GGGCAGCTTGGGAG-1 
#>             "01"             "02"             "02"             "01"             "01" 
#> GGGCAGCTTTTCTG-1 GGGCCAACCTTGGA-1 GGGCCAACGCGTTA-1 GGGCCAACTACGCA-1 GGGCCAACTCCAAG-1 
#>             "01"             "02"             "04"             "02"             "04" 
#> GGGCCATGATGGTC-1 GGGCCATGTTGACG-1 GGGTAACTCAGCTA-1 GGGTAACTCTAGTG-1 GGGTAACTCTGGAT-1 
#>             "01"             "01"             "01"             "04"             "01" 
#> GGGTTAACGTGCAT-1 GGTAAAGAGCTAAC-1 GGTACAACTGCAAC-1 GGTACATGAAAGCA-1 GGTACATGAGCTCA-1 
#>             "03"             "03"             "01"             "04"             "01" 
#> GGTACATGCGGTAT-1 GGTACATGGTTACG-1 GGTACATGTGGGAG-1 GGTACTGAACTCTT-1 GGTAGTACACCACA-1 
#>             "01"             "01"             "01"             "02"             "01" 
#> GGTAGTACACTAGC-1 GGTAGTACCCTGTC-1 GGTAGTACGCCATA-1 GGTAGTACTGTCTT-1 GGTATCGAGACAAA-1 
#>             "02"             "01"             "02"             "01"             "02" 
#> GGTATCGATGAACC-1 GGTCAAACCAAAGA-1 GGTCTAGAGAAACA-1 GGTCTAGATAGCGT-1 GGTGATACCGACTA-1 
#>             "04"             "01"             "02"             "02"             "04" 
#> GGTGATACGACTAC-1 GGTGATACTGTTTC-1 GGTGGAGAAACGGG-1 GGTGGAGAAGTAGA-1 GGTGGAGACAGATC-1 
#>             "02"             "01"             "03"             "01"             "03" 
#> GGTGGAGATCGATG-1 GGTGGAGATCTCTA-1 GGTGGAGATTACTC-1 GGTTTACTACGCAT-1 GTAACGTGACCTCC-1 
#>             "01"             "02"             "03"             "03"             "02" 
#> GTAACGTGATCGGT-1 GTAACGTGCAGCTA-1 GTAACGTGGTTGAC-1 GTAAGCACAACGGG-1 GTAAGCACTCATTC-1 
#>             "04"             "04"             "04"             "01"             "04" 
#> GTAAGCTGGTACCA-1 GTAATAACCTTCTA-1 GTAATAACGTTGTG-1 GTACCCTGACAGTC-1 GTACCCTGGAGCTT-1 
#>             "02"             "02"             "01"             "02"             "01" 
#> GTACCCTGTCCTTA-1 GTACCCTGTGAACC-1 GTACGTGAACGTTG-1 GTACTTTGTCGACA-1 GTAGACTGAGATGA-1 
#>             "03"             "01"             "03"             "01"             "02" 
#> GTAGACTGTATTCC-1 GTAGCAACAGTCGT-1 GTAGCAACCATTTC-1 GTAGCAACGGTAGG-1 GTAGCATGCACTCC-1 
#>             "01"             "02"             "04"             "02"             "04" 
#> GTAGCATGTAAGCC-1 GTAGCCCTGACGTT-1 GTAGCTGAAGCTAC-1 GTAGCTGAATTCGG-1 GTAGGTACACGGGA-1 
#>             "02"             "01"             "02"             "01"             "02" 
#> GTAGTGACCTCATT-1 GTAGTGTGAGCGGA-1 GTAGTGTGAGGCGA-1 GTAGTGTGTGGTTG-1 GTATCACTGGTAGG-1 
#>             "01"             "03"             "02"             "01"             "02" 
#> GTATCTACAGAAGT-1 GTATCTACGACGAG-1 GTATCTACGTTACG-1 GTATTAGAAACAGA-1 GTATTAGAGGTCTA-1 
#>             "03"             "03"             "01"             "03"             "01" 
#> GTATTCACACAGCT-1 GTATTCACGGGTGA-1 GTCAACGACACTGA-1 GTCAACGAGTGTAC-1 GTCAATCTACACCA-1 
#>             "01"             "03"             "01"             "02"             "01" 
#> GTCAATCTGTAGCT-1 GTCAATCTTGTGGT-1 GTCACCTGCCTCCA-1 GTCACCTGTCCCGT-1 GTCATACTAATCGC-1 
#>             "03"             "01"             "01"             "01"             "04" 
#> GTCATACTGCGATT-1 GTCATACTTCGCCT-1 GTCATACTTTACCT-1 GTCATACTTTGACG-1 GTCCAAGAAAAACG-1 
#>             "03"             "03"             "03"             "01"             "01" 
#> GTCCACTGACCTCC-1 GTCCACTGGGTACT-1 GTCCAGCTACGGGA-1 GTCCCATGTGGTGT-1 GTCGAATGAAGGCG-1 
#>             "01"             "02"             "01"             "02"             "02" 
#> GTCGACCTGAATGA-1 GTCGACCTGTTCAG-1 GTCGCACTTGAGAA-1 GTCTAACTGGTCTA-1 GTCTAGGAGCTTCC-1 
#>             "03"             "01"             "04"             "02"             "02" 
#> GTGAACACACTCTT-1 GTGAACACTCAGGT-1 GTGACCCTTAAGCC-1 GTGATGACAAGTGA-1 GTGATGACCTGAGT-1 
#>             "01"             "01"             "01"             "01"             "04" 
#> GTGATGACGGTTTG-1 GTGATTCTCATTTC-1 GTGATTCTCTCTCG-1 GTGATTCTGGTTCA-1 GTGATTCTGTCGAT-1 
#>             "01"             "01"             "02"             "03"             "01" 
#> GTGATTCTTAGCGT-1 GTGCCACTCAGGAG-1 GTGGATTGCACTAG-1 GTGGATTGCGGAGA-1 GTGGATTGTAACGC-1 
#>             "04"             "01"             "02"             "01"             "01" 
#> GTGTACGATCAGTG-1 GTGTAGTGGGTACT-1 GTGTATCTAGCCTA-1 GTGTATCTAGTAGA-1 GTGTATCTGTTACG-1 
#>             "01"             "01"             "04"             "03"             "04" 
#> GTGTCAGAAGCGTT-1 GTTAAAACCGAGAG-1 GTTAAATGCTCGAA-1 GTTAAATGTCGACA-1 GTTAACCTAGCTAC-1 
#>             "03"             "03"             "01"             "04"             "01" 
#> GTTAACCTTGCTTT-1 GTTAGGTGCACTCC-1 GTTAGGTGCCAGTA-1 GTTAGGTGCCCAAA-1 GTTAGGTGGAACTC-1 
#>             "02"             "01"             "02"             "02"             "04" 
#> GTTAGTCTAAGAAC-1 GTTATAGAGGACAG-1 GTTATGCTTTCATC-1 GTTCAACTGGGACA-1 GTTCAACTTATGCG-1 
#>             "01"             "01"             "01"             "03"             "01" 
#> GTTGACGAGCCCTT-1 GTTGACGATATCGG-1 GTTGAGTGGTCTTT-1 GTTGAGTGTGCTTT-1 GTTGATCTGGGACA-1 
#>             "03"             "03"             "02"             "01"             "01" 
#> GTTGATCTTTTCAC-1 GTTGGATGTTTACC-1 GTTGTACTATTCCT-1 GTTGTACTTTTGGG-1 GTTTAAGACCATGA-1 
#>             "03"             "02"             "02"             "01"             "02" 
#> GTTTAAGACTGTCC-1 TAAACAACCAACCA-1 TAAACAACGAATCC-1 TAAAGACTCAGGAG-1 TAAATCGATGAGGG-1 
#>             "03"             "01"             "04"             "01"             "01" 
#> TAACAATGTGCCCT-1 TAACACCTTCGCTC-1 TAACACCTTCGTAG-1 TAACACCTTGTTTC-1 TAACATGACACTAG-1 
#>             "04"             "02"             "02"             "03"             "04" 
#> TAACCGGACTTACT-1 TAACGTCTCAACCA-1 TAACGTCTCATTGG-1 TAACTAGAATTTCC-1 TAACTAGACTTAGG-1 
#>             "01"             "02"             "01"             "01"             "01" 
#> TAACTAGATCTGGA-1 TAACTCACGAGGAC-1 TAACTCACGTACAC-1 TAACTCACGTATCG-1 TAACTCACTCTACT-1 
#>             "01"             "02"             "04"             "02"             "03" 
#> TAAGAACTGTGTCA-1 TAAGAGGACTAAGC-1 TAAGAGGACTTGTT-1 TAAGATACGGTTCA-1 TAAGATTGCGTAGT-1 
#>             "02"             "04"             "03"             "02"             "01" 
#> TAAGATTGTTGCTT-1 TAAGCGTGAGGTTC-1 TAAGCGTGGACAAA-1 TAAGCGTGGGAAAT-1 TAAGCGTGTGCTCC-1 
#>             "01"             "02"             "02"             "01"             "02" 
#> TAAGGCTGCCATGA-1 TAAGGCTGCTGCTC-1 TAAGGCTGTCTCGC-1 TAAGGGCTGCTGTA-1 TAAGGGCTTTACTC-1 
#>             "01"             "01"             "02"             "03"             "01" 
#> TAAGTAACCGAGAG-1 TAAGTAACCTCCAC-1 TAAGTAACCTGTAG-1 TAAGTAACTTGTCT-1 TAATGATGAGCGGA-1 
#>             "04"             "04"             "01"             "01"             "01" 
#> TAATGCCTCATGAC-1 TAATGCCTCGTCTC-1 TAATGTGAAGATGA-1 TAATGTGACTGCAA-1 TAATGTGATTACTC-1 
#>             "01"             "03"             "01"             "02"             "01" 
#> TACAAATGGGTACT-1 TACAATGAAAACAG-1 TACAATGACTTAGG-1 TACAATGATGCTAG-1 TACACACTCACACA-1 
#>             "01"             "02"             "01"             "01"             "01" 
#> TACACACTCTTACT-1 TACATAGAACGCAT-1 TACATCACACGGGA-1 TACATCACCTGTTT-1 TACATCACGCTAAC-1 
#>             "01"             "01"             "01"             "02"             "04" 
#> TACATCACTGAACC-1 TACCATTGAGGTTC-1 TACCATTGCGGGAA-1 TACCATTGGGGATG-1 TACCATTGTGAGGG-1 
#>             "02"             "01"             "02"             "02"             "02" 
#> TACCGGCTGTTGGT-1 TACGAGTGATCTCT-1 TACGAGTGATGCTG-1 TACGAGTGCGGAGA-1 TACGAGTGGTTGGT-1 
#>             "01"             "01"             "02"             "01"             "01" 
#> TACGATCTAGTGTC-1 TACGATCTCACTGA-1 TACGATCTTACGAC-1 TACGCAGAGAATCC-1 TACGCCACATTCCT-1 
#>             "01"             "02"             "03"             "03"             "01" 
#> TACGCCACTCCCAC-1 TACGCCACTCCGAA-1 TACGGAACGCGTTA-1 TACGGCCTGGGACA-1 TACGTACTACGGAG-1 
#>             "02"             "04"             "04"             "03"             "01" 
#> TACGTACTCAGTTG-1 TACGTACTCCCGTT-1 TACGTTACAGAAGT-1 TACGTTACCAAGCT-1 TACTAAGAAAGGTA-1 
#>             "01"             "04"             "01"             "02"             "04" 
#> TACTAAGAATCACG-1 TACTAAGATGATGC-1 TACTAAGATTGCGA-1 TACTACACGAGAGC-1 TACTACACTTACCT-1 
#>             "01"             "02"             "01"             "01"             "04" 
#> TACTACTGAACCTG-1 TACTACTGATGTCG-1 TACTACTGATTCTC-1 TACTACTGTATGGC-1 TACTCAACGGTCTA-1 
#>             "02"             "03"             "01"             "01"             "02" 
#> TACTCAACTGCTAG-1 TACTCCCTCAGTTG-1 TACTCTGAATCGAC-1 TACTCTGACGAGTT-1 TACTCTGATTGACG-1 
#>             "04"             "01"             "03"             "01"             "04" 
#> TACTGGGATCGATG-1 TACTGTTGAAAGCA-1 TACTGTTGAGGCGA-1 TACTGTTGCTGAAC-1 TACTTGACTCCTCG-1 
#>             "01"             "01"             "03"             "04"             "03" 
#> TACTTGACTGGTGT-1 TACTTTCTTTTGGG-1 TAGAAACTAATCGC-1 TAGAAACTGCTTCC-1 TAGAAACTGGGATG-1 
#>             "04"             "01"             "01"             "02"             "03" 
#> TAGAATTGCGACAT-1 TAGAATTGTATCGG-1 TAGACGTGCTTGAG-1 TAGACGTGTCGCTC-1 TAGAGCACCTTACT-1 
#>             "01"             "01"             "01"             "01"             "04" 
#> TAGATTGACTTGTT-1 TAGATTGAGGCATT-1 TAGCATCTCAGCTA-1 TAGCATCTCCCTCA-1 TAGCATCTGCTGTA-1 
#>             "04"             "01"             "03"             "01"             "02" 
#> TAGCATCTGGGACA-1 TAGCATCTTGTCGA-1 TAGCCCACAAAAGC-1 TAGCCCACAGCCAT-1 TAGCCCACAGCTAC-1 
#>             "01"             "01"             "01"             "03"             "03" 
#> TAGCCCACCCACAA-1 TAGCCCTGCGGAGA-1 TAGCCGCTTACGAC-1 TAGCCGCTTACTTC-1 TAGCCGCTTTCCAT-1 
#>             "01"             "01"             "01"             "03"             "02" 
#> TAGCTACTGAATAG-1 TAGCTACTGTAGCT-1 TAGCTACTTTTGCT-1 TAGGACTGTGCTGA-1 TAGGAGCTAAGGCG-1 
#>             "04"             "01"             "01"             "01"             "04" 
#> TAGGAGCTGAGGGT-1 TAGGAGCTTGCATG-1 TAGGCAACCGTCTC-1 TAGGCATGCTCTCG-1 TAGGCATGGCGAGA-1 
#>             "01"             "04"             "04"             "03"             "03" 
#> TAGGCTGATGCCTC-1 TAGGGACTGAACTC-1 TAGGTCGACACTGA-1 TAGGTCGAGGATCT-1 TAGGTGACACACTG-1 
#>             "02"             "03"             "01"             "04"             "01" 
#> TAGGTGACACGTTG-1 TAGGTGTGTTCTGT-1 TAGGTTCTGAAGGC-1 TAGGTTCTTCTTAC-1 TAGGTTCTTGCTGA-1 
#>             "04"             "03"             "01"             "02"             "02" 
#> TAGTAAACCTCGCT-1 TAGTAAACGTCACA-1 TAGTAATGAGATCC-1 TAGTACCTAAGAAC-1 TAGTATGATCTTAC-1 
#>             "01"             "01"             "01"             "02"             "04" 
#> TAGTATGATTCTCA-1 TAGTCTTGGCTGTA-1 TAGTCTTGGGACTT-1 TAGTCTTGTGGAAA-1 TAGTGGTGAAGTGA-1 
#>             "01"             "01"             "01"             "03"             "03" 
#> TAGTTAGAACCACA-1 TAGTTAGATGAACC-1 TATAAGACAACAGA-1 TATAAGACAGCTCA-1 TATAAGTGACACCA-1 
#>             "03"             "01"             "01"             "02"             "02" 
#> TATAAGTGTATCGG-1 TATAAGTGTGGTGT-1 TATACAGAACCCTC-1 TATACAGAAGAACA-1 TATACAGATCCAGA-1 
#>             "02"             "02"             "01"             "01"             "01" 
#> TATACCACCTGATG-1 TATACGCTACCAAC-1 TATAGATGGACGGA-1 TATAGATGTTCCGC-1 TATCCAACCAGCTA-1 
#>             "04"             "01"             "01"             "02"             "02" 
#> TATCCAACTCTCTA-1 TATCGACTACTAGC-1 TATCGACTCGATAC-1 TATCGTACAGATGA-1 TATCGTACATTCCT-1 
#>             "03"             "01"             "02"             "01"             "02" 
#> TATCTCGAGAGATA-1 TATCTGACAGGTTC-1 TATCTGACTGTTTC-1 TATCTTCTAAACAG-1 TATGAATGGAGGAC-1 
#>             "01"             "03"             "01"             "01"             "03" 
#> TATGAATGTTTGCT-1 TATGCGGATAACCG-1 TATGGGTGCATCAG-1 TATGGGTGCTAGCA-1 TATGGTCTCTACCC-1 
#>             "02"             "01"             "03"             "04"             "01" 
#> TATGTCACGGAACG-1 TATGTCACTAACCG-1 TATGTCACTTCTCA-1 TATGTGCTCCGATA-1 TATGTGCTGGATTC-1 
#>             "04"             "02"             "04"             "02"             "01" 
#> TATTGCTGAAGAAC-1 TATTGCTGCCGTTC-1 TATTGCTGTCTGGA-1 TATTGCTGTGCACA-1 TATTTCCTATTGGC-1 
#>             "02"             "04"             "01"             "01"             "02" 
#> TATTTCCTGGAGGT-1 TATTTCCTGGTGTT-1 TCAACACTGTTTGG-1 TCAAGGACAGCGTT-1 TCAAGGACATTCTC-1 
#>             "03"             "01"             "03"             "01"             "03" 
#> TCAAGGACGGTGTT-1 TCAATCACACTCTT-1 TCAATCACAGTCGT-1 TCACAACTATGTGC-1 TCACAACTTTGCTT-1 
#>             "02"             "03"             "02"             "01"             "02" 
#> TCACATACACTTTC-1 TCACATACAGGGTG-1 TCACCCGAGACGGA-1 TCACCGTGCTCGCT-1 TCACCTCTACGACT-1 
#>             "01"             "01"             "02"             "02"             "03" 
#> TCACCTCTTCCAAG-1 TCACGAGAGGAGGT-1 TCACTATGGGGCAA-1 TCACTATGGTTGTG-1 TCAGACGACGCTAA-1 
#>             "02"             "04"             "03"             "04"             "01" 
#> TCAGACGACGTTAG-1 TCAGAGACTCCAGA-1 TCAGCAGACTCCAC-1 TCAGCGCTCTAGTG-1 TCAGCGCTGGATCT-1 
#>             "03"             "01"             "01"             "01"             "04" 
#> TCAGCGCTGGTATC-1 TCAGGATGAAGTAG-1 TCAGGATGCCTTTA-1 TCAGTGGAAGATCC-1 TCAGTTACCTACGA-1 
#>             "01"             "01"             "02"             "03"             "02" 
#> TCAGTTACTAGAAG-1 TCATCAACCCGATA-1 TCATCAACTGTTCT-1 TCATCATGCAGTTG-1 TCATCCCTTACTGG-1 
#>             "01"             "01"             "02"             "01"             "01" 
#> TCATTCGATACAGC-1 TCCACGTGGAAACA-1 TCCACTCTACACTG-1 TCCACTCTGAGCTT-1 TCCACTCTTACTTC-1 
#>             "02"             "01"             "01"             "02"             "04" 
#> TCCATAACAAAGTG-1 TCCATAACCGTAGT-1 TCCATAACGATGAA-1 TCCATAACTACGCA-1 TCCATCCTCCCTAC-1 
#>             "01"             "04"             "01"             "01"             "03" 
#> TCCCACGATCATTC-1 TCCCATCTCAAAGA-1 TCCCGAACACAGTC-1 TCCCGAACTTCGCC-1 TCCCGATGAGATCC-1 
#>             "01"             "02"             "03"             "02"             "01" 
#> TCCCGATGCCTGAA-1 TCCCTACTCAACTG-1 TCCGAAGACAATCG-1 TCCGAAGACGTTAG-1 TCCGGACTGAGGTG-1 
#>             "02"             "04"             "02"             "01"             "01" 
#> TCCGGACTGTACGT-1 TCCTAAACATCGAC-1 TCCTAAACCGAGAG-1 TCCTAAACCGCATA-1 TCCTAATGGTTTGG-1 
#>             "01"             "01"             "01"             "03"             "03" 
#> TCCTACCTGTCGTA-1 TCCTATGAAAAGCA-1 TCGAATCTCTGGTA-1 TCGACCTGCCGATA-1 TCGACGCTTCTATC-1 
#>             "01"             "03"             "03"             "02"             "02" 
#> TCGACGCTTTGACG-1 TCGAGAACGACAGG-1 TCGAGAACGTTAGC-1 TCGAGCCTATCAGC-1 TCGAGCCTGCGAGA-1 
#>             "01"             "01"             "03"             "04"             "01" 
#> TCGAGCCTTGTGAC-1 TCGATACTATTCCT-1 TCGATACTTGCACA-1 TCGATTTGATGCCA-1 TCGATTTGCACTCC-1 
#>             "01"             "01"             "01"             "02"             "01" 
#> TCGATTTGCAGCTA-1 TCGATTTGCCTACC-1 TCGATTTGTCGTGA-1 TCGCAGCTAGATCC-1 TCGCCATGAGACTC-1 
#>             "03"             "02"             "04"             "01"             "01" 
#> TCGCCATGTGGTCA-1 TCGGACCTAACAGA-1 TCGGACCTATAAGG-1 TCGGACCTGTACAC-1 TCGGTAGAGTAGGG-1 
#>             "04"             "01"             "04"             "01"             "01" 
#> TCGGTAGATCCCAC-1 TCGTAGGATCGACA-1 TCGTTATGGACAAA-1 TCTAACACCAGTTG-1 TCTAACACGAGCAG-1 
#>             "04"             "01"             "01"             "03"             "02" 
#> TCTAACTGAACCAC-1 TCTAAGCTAATGCC-1 TCTAAGCTTAGTCG-1 TCTAAGCTTCTAGG-1 TCTAAGCTTGTTCT-1 
#>             "01"             "01"             "03"             "02"             "02" 
#> TCTAAGCTTTCGCC-1 TCTACAACGACTAC-1 TCTAGACTTAGAAG-1 TCTAGTTGCACCAA-1 TCTATGTGAAGAGT-1 
#>             "04"             "02"             "02"             "02"             "02" 
#> TCTATGTGAGTCTG-1 TCTCAAACCTAAGC-1 TCTCTAGAATTTCC-1 TCTGATACACGTGT-1 TCTGATACTCGCCT-1 
#>             "01"             "04"             "01"             "01"             "01" 
#> TCTTACGAACCTGA-1 TCTTCAGAGCTACA-1 TCTTGATGCGGAGA-1 TGAAATTGGTGAGG-1 TGAACCGAAAACGA-1 
#>             "02"             "02"             "01"             "02"             "01" 
#> TGAACCGACTACTT-1 TGAACCGATTCGGA-1 TGAAGCACTCACGA-1 TGAAGCTGAACGAA-1 TGAAGCTGCATGGT-1 
#>             "02"             "02"             "01"             "01"             "04" 
#> TGAAGCTGCGTAAC-1 TGAATAACCACTTT-1 TGAATAACTCCCAC-1 TGACACGACCTTAT-1 TGACCAGACAACCA-1 
#>             "01"             "01"             "03"             "04"             "01" 
#> TGACCAGAGGATTC-1 TGACCGCTAAAAGC-1 TGACCGCTCTGCAA-1 TGACGATGCAAAGA-1 TGACGCCTGTACCA-1 
#>             "01"             "01"             "01"             "02"             "01" 
#> TGACGCCTTTACTC-1 TGACTGGAAGAGAT-1 TGACTGGACCGTAA-1 TGACTGGACGCAAT-1 TGACTGGAGGACAG-1 
#>             "03"             "02"             "01"             "01"             "04" 
#> TGACTGGATTCTCA-1 TGACTTACACACCA-1 TGACTTACAGTCTG-1 TGACTTTGCGCATA-1 TGACTTTGTTTGTC-1 
#>             "01"             "01"             "02"             "01"             "01" 
#> TGAGACACAAGGTA-1 TGAGACACTCAAGC-1 TGAGCTGAATGCTG-1 TGAGCTGACTGGAT-1 TGAGCTGATGCTAG-1 
#>             "01"             "01"             "02"             "02"             "02" 
#> TGAGGACTCTCATT-1 TGAGGACTTCATTC-1 TGAGGTACGAACCT-1 TGAGTCGAGTTACG-1 TGAGTGACTGAGCT-1 
#>             "02"             "01"             "02"             "04"             "01" 
#> TGATAAACGAATCC-1 TGATAAACTCCGTC-1 TGATAAACTTTCAC-1 TGATACCTCACTAG-1 TGATACCTGTTGGT-1 
#>             "01"             "03"             "01"             "02"             "01" 
#> TGATACCTTATGCG-1 TGATACCTTGAAGA-1 TGATATGAACCTTT-1 TGATCACTAGCATC-1 TGATCACTCTCGCT-1 
#>             "01"             "01"             "01"             "03"             "01" 
#> TGATCACTTCTACT-1 TGATCGGACTGACA-1 TGATCGGAGGAGCA-1 TGATCGGATATGCG-1 TGATTAGACATTGG-1 
#>             "04"             "02"             "04"             "02"             "01" 
#> TGATTAGATGACTG-1 TGATTAGATGCTAG-1 TGATTCACTATGCG-1 TGATTCACTGTCAG-1 TGATTCTGCCGAAT-1 
#>             "04"             "01"             "01"             "04"             "01" 
#> TGATTCTGCTCTTA-1 TGCAAGTGAGAACA-1 TGCAAGTGGGTAGG-1 TGCAATCTTCAGGT-1 TGCACAGACGACAT-1 
#>             "01"             "01"             "02"             "02"             "03" 
#> TGCCAAGAGCAGTT-1 TGCCAAGATCTCTA-1 TGCCACTGAACGTC-1 TGCCACTGCGATAC-1 TGCCAGCTTGGCAT-1 
#>             "02"             "01"             "01"             "03"             "01" 
#> TGCCCAACAGCAAA-1 TGCCCAACCGCATA-1 TGCCGACTCTCCCA-1 TGCGAAACAGTCAC-1 TGCGAAACGTTGCA-1 
#>             "01"             "02"             "04"             "04"             "04" 
#> TGCGATGAACGGTT-1 TGCGATGACCTCGT-1 TGCGATGACTAGTG-1 TGCGATGACTGCTC-1 TGCGATGACTTGCC-1 
#>             "01"             "01"             "04"             "04"             "04" 
#> TGCGATGAGTGCTA-1 TGCGCACTCTTGAG-1 TGCGTAGAATAAGG-1 TGCGTAGACGGGAA-1 TGCGTAGATGGTCA-1 
#>             "02"             "02"             "02"             "04"             "02" 
#> TGCTAGGAAACCGT-1 TGCTAGGATAGTCG-1 TGCTATACGGTTCA-1 TGCTATACTGCTGA-1 TGCTGAGAGAGCAG-1 
#>             "03"             "01"             "02"             "03"             "03" 
#> TGCTGAGATTATCC-1 TGGAAAGACTCTCG-1 TGGAAAGAGCGATT-1 TGGAAAGAGGTCAT-1 TGGAAAGATATGGC-1 
#>             "01"             "04"             "01"             "02"             "01" 
#> TGGAACACAAACAG-1 TGGAACACGCTAAC-1 TGGAAGCTCAGATC-1 TGGACCCTACACTG-1 TGGACCCTCATGGT-1 
#>             "03"             "01"             "01"             "02"             "01" 
#> TGGACCCTGGTACT-1 TGGACTGAGTATGC-1 TGGAGACTATCAGC-1 TGGAGACTTCAAGC-1 TGGAGACTTGACCA-1 
#>             "02"             "01"             "02"             "01"             "03" 
#> TGGAGGGACGGAGA-1 TGGAGGGAGCTATG-1 TGGATCGATAAAGG-1 TGGATGTGACCTAG-1 TGGATGTGTGAAGA-1 
#>             "02"             "01"             "01"             "04"             "04" 
#> TGGATTCTCATACG-1 TGGCAATGCTTGTT-1 TGGCACCTTCACGA-1 TGGCACCTTCAGTG-1 TGGGTATGAAGAGT-1 
#>             "01"             "04"             "01"             "02"             "01" 
#> TGGGTATGCACAAC-1 TGGGTATGGTACGT-1 TGGGTATGTTTGGG-1 TGGTAGACATGCCA-1 TGGTAGACCCTCAC-1 
#>             "01"             "04"             "02"             "01"             "03" 
#> TGGTAGACCTGATG-1 TGGTAGTGCACTGA-1 TGGTATCTAAACAG-1 TGGTATCTCTTCCG-1 TGGTCAGACCCAAA-1 
#>             "01"             "02"             "01"             "01"             "01" 
#> TGGTTACTGACGTT-1 TGGTTACTGTTCTT-1 TGTAACCTAGAGGC-1 TGTAACCTTGCCTC-1 TGTAATGACACAAC-1 
#>             "02"             "01"             "01"             "02"             "03" 
#> TGTAATGAGGTAAA-1 TGTACTTGCTCTAT-1 TGTAGGTGCGAGAG-1 TGTAGGTGCTATGG-1 TGTAGGTGCTCTAT-1 
#>             "03"             "02"             "04"             "01"             "02" 
#> TGTAGGTGTGCTGA-1 TGTAGTCTTCCAGA-1 TGTAGTCTTGCACA-1 TGTATCTGTTAGGC-1 TGTATGCTCATGGT-1 
#>             "01"             "01"             "03"             "01"             "04" 
#> TGTATGCTGTAGGG-1 TGTATGCTTTCATC-1 TGTCAGGAATACCG-1 TGTCAGGAGATGAA-1 TGTCTAACCCCTTG-1 
#>             "01"             "01"             "01"             "02"             "01" 
#> TGTGACGATTCTCA-1 TGTGAGACTGTCAG-1 TGTGAGACTTGAGC-1 TGTGAGTGACCACA-1 TGTGAGTGAGTGCT-1 
#>             "03"             "02"             "01"             "01"             "02" 
#> TGTGAGTGGAGATA-1 TGTGATCTCTCTAT-1 TGTGATCTGACACT-1 TGTGGATGGCCAAT-1 TGTTAAGACAAAGA-1 
#>             "03"             "04"             "01"             "04"             "02" 
#> TGTTAAGATAAGGA-1 TGTTACACCGCATA-1 TGTTACACGACTAC-1 TGTTACTGGCTACA-1 TGTTACTGTAGTCG-1 
#>             "02"             "02"             "02"             "03"             "03" 
#> TTAACCACCGTAAC-1 TTAACCACTAAGGA-1 TTAACCACTCAGAC-1 TTACACACGTGTTG-1 TTACACACTCCTAT-1 
#>             "01"             "03"             "01"             "01"             "01" 
#> TTACCATGAATCGC-1 TTACCATGGTTGAC-1 TTACCATGTGTCTT-1 TTACCATGTTGTGG-1 TTACGACTGAGAGC-1 
#>             "02"             "01"             "03"             "04"             "01" 
#> TTACGACTTGACAC-1 TTACGTACGTTCAG-1 TTACTCGAAGAATG-1 TTACTCGACGCAAT-1 TTACTCGAGGGTGA-1 
#>             "02"             "03"             "02"             "02"             "01" 
#> TTACTCGATCTACT-1 TTAGAATGTGGTGT-1 TTAGAATGTGTAGC-1 TTAGACCTCCTACC-1 TTAGACCTCCTTTA-1 
#>             "03"             "01"             "01"             "01"             "02" 
#> TTAGCTACAACCGT-1 TTAGCTACTGTCCC-1 TTAGCTACTTTCGT-1 TTAGGGACGCGAAG-1 TTAGGGTGCTGGAT-1 
#>             "01"             "02"             "01"             "01"             "04" 
#> TTAGGGTGTCCTGC-1 TTAGGTCTACTTTC-1 TTAGTCACCAGTTG-1 TTAGTCTGAAAGCA-1 TTAGTCTGCCAACA-1 
#>             "02"             "02"             "01"             "04"             "03" 
#> TTAGTCTGTGCACA-1 TTATCCGACTAGTG-1 TTATCCGAGAAAGT-1 TTATGAGAGATAAG-1 TTATGCACGTCACA-1 
#>             "01"             "04"             "02"             "01"             "04" 
#> TTATGGCTTATGGC-1 TTATTCCTATGCTG-1 TTATTCCTGGACAG-1 TTATTCCTGGTACT-1 TTATTCCTTCGTGA-1 
#>             "02"             "02"             "04"             "04"             "01" 
#> TTCAAAGATAAAGG-1 TTCAACACAACAGA-1 TTCAACACCCCAAA-1 TTCAACACGGACGA-1 TTCAAGCTAAGAAC-1 
#>             "01"             "01"             "02"             "02"             "02" 
#> TTCAAGCTAGATGA-1 TTCAAGCTGTTGAC-1 TTCAAGCTTGATGC-1 TTCAAGCTTTCGCC-1 TTCACAACCCGTTC-1 
#>             "01"             "01"             "01"             "01"             "02" 
#> TTCACAACGTCTGA-1 TTCAGACTACCCAA-1 TTCAGACTCTCGAA-1 TTCAGTACCGACTA-1 TTCAGTACTCAAGC-1 
#>             "02"             "01"             "01"             "01"             "01" 
#> TTCAGTACTCCTAT-1 TTCAGTTGCCAAGT-1 TTCAGTTGTCCTTA-1 TTCAGTTGTCTAGG-1 TTCAGTTGTCTCGC-1 
#>             "02"             "01"             "02"             "01"             "04" 
#> TTCATCGAGGTGGA-1 TTCATGTGTGGTGT-1 TTCATTCTATGTCG-1 TTCATTCTTCTCTA-1 TTCCAAACCTATGG-1 
#>             "02"             "01"             "02"             "01"             "02" 
#> TTCCAAACCTCCCA-1 TTCCAAACTCCCAC-1 TTCCAAACTTGACG-1 TTCCATGACGAGAG-1 TTCCATGACTGTCC-1 
#>             "04"             "03"             "03"             "02"             "01" 
#> TTCCCACTTGAGGG-1 TTCCCACTTGTCTT-1 TTCCTAGAAAGTGA-1 TTCCTAGACTAGTG-1 TTCGAGGACTCTAT-1 
#>             "03"             "02"             "01"             "02"             "01" 
#> TTCGAGGAGGGCAA-1 TTCGAGGATAGAAG-1 TTCGATTGAGCATC-1 TTCGGAGAATGCCA-1 TTCGGAGATGTGCA-1 
#>             "01"             "02"             "01"             "02"             "01" 
#> TTCGTATGAAAAGC-1 TTCGTATGGATAGA-1 TTCGTATGGTCTGA-1 TTCGTATGTCCTTA-1 TTCTACGAACGTAC-1 
#>             "03"             "03"             "01"             "02"             "01" 
#> TTCTACGAGTTGGT-1 TTCTAGTGACACGT-1 TTCTAGTGCATGAC-1 TTCTAGTGGAGAGC-1 TTCTAGTGGTCACA-1 
#>             "01"             "01"             "02"             "03"             "02" 
#> TTCTCAGAAGAGAT-1 TTCTCAGAAGCATC-1 TTCTCAGATGGAGG-1 TTCTGATGGAGACG-1 TTCTTACTCTGGAT-1 
#>             "01"             "04"             "01"             "03"             "02" 
#> TTGAACCTCCTTGC-1 TTGAATGAACTACG-1 TTGAATGACTTACT-1 TTGAATGATCTCAT-1 TTGACACTCTGTAG-1 
#>             "04"             "02"             "01"             "04"             "01" 
#> TTGACACTGATAAG-1 TTGAGGACAGAACA-1 TTGAGGACTACGCA-1 TTGAGGTGGACGGA-1 TTGCATTGAGCTAC-1 
#>             "04"             "02"             "02"             "01"             "01" 
#> TTGCATTGCTAAGC-1 TTGCATTGTGACTG-1 TTGCTAACACCAAC-1 TTGCTAACACGCTA-1 TTGCTAACCACTCC-1 
#>             "02"             "01"             "01"             "02"             "01" 
#> TTGCTATGGTACGT-1 TTGCTATGGTAGGG-1 TTGGAGACCAATCG-1 TTGGAGACGCTATG-1 TTGGAGACTATGGC-1 
#>             "02"             "02"             "01"             "02"             "04" 
#> TTGGGAACTGAACC-1 TTGGTACTACTGGT-1 TTGGTACTCTTAGG-1 TTGGTACTGAATCC-1 TTGGTACTGGATTC-1 
#>             "01"             "02"             "01"             "04"             "04" 
#> TTGTACACGTTGTG-1 TTGTACACTTGCAG-1 TTGTAGCTAGCTCA-1 TTGTAGCTCTCTTA-1 TTGTCATGGACGGA-1 
#>             "04"             "01"             "01"             "04"             "03" 
#> TTTAGAGATCCTCG-1 TTTAGCTGATACCG-1 TTTAGCTGGATACC-1 TTTAGCTGTACTCT-1 TTTAGGCTCCTTTA-1 
#>             "04"             "01"             "02"             "02"             "02" 
#> TTTATCCTGTTGTG-1 TTTCACGAGGTTCA-1 TTTCAGTGGAAGGC-1 TTTCAGTGTCACGA-1 TTTCAGTGTCTATC-1 
#>             "02"             "01"             "01"             "04"             "02" 
#> TTTCAGTGTGCAGT-1 TTTCCAGAGGTGAG-1 TTTCGAACACCTGA-1 TTTCGAACTCTCAT-1 TTTCTACTGAGGCA-1 
#>             "04"             "01"             "04"             "02"             "04" 
#> TTTCTACTTCCTCG-1 TTTGCATGAGAGGC-1 TTTGCATGCCTCAC-1 
#>             "04"             "04"             "01"

Top rows heatmap

Heatmaps of the top rows:

top_rows_heatmap(res_rh)

plot of chunk top-rows-heatmap

Top rows on each node:

top_rows_overlap(res_rh, method = "upset")

plot of chunk top-rows-overlap

UMAP plot

UMAP plot which shows how samples are separated.

par(mfrow = c(1, 2))
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 61),
    method = "UMAP", top_value_method = "SD", top_n = 400, scale_rows = FALSE)
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 61),
    method = "UMAP", top_value_method = "ATC", top_n = 400, scale_rows = TRUE)

plot of chunk tab-dimension-reduction-by-depth-1

par(mfrow = c(1, 2))
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 131),
    method = "UMAP", top_value_method = "SD", top_n = 400, scale_rows = FALSE)
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 131),
    method = "UMAP", top_value_method = "ATC", top_n = 400, scale_rows = TRUE)

plot of chunk tab-dimension-reduction-by-depth-2

par(mfrow = c(1, 2))
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 153),
    method = "UMAP", top_value_method = "SD", top_n = 400, scale_rows = FALSE)
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 153),
    method = "UMAP", top_value_method = "ATC", top_n = 400, scale_rows = TRUE)

plot of chunk tab-dimension-reduction-by-depth-3

par(mfrow = c(1, 2))
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 169),
    method = "UMAP", top_value_method = "SD", top_n = 400, scale_rows = FALSE)
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 169),
    method = "UMAP", top_value_method = "ATC", top_n = 400, scale_rows = TRUE)

plot of chunk tab-dimension-reduction-by-depth-4

par(mfrow = c(1, 2))
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 227),
    method = "UMAP", top_value_method = "SD", top_n = 400, scale_rows = FALSE)
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 227),
    method = "UMAP", top_value_method = "ATC", top_n = 400, scale_rows = TRUE)

plot of chunk tab-dimension-reduction-by-depth-5

par(mfrow = c(1, 2))
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 807),
    method = "UMAP", top_value_method = "SD", top_n = 400, scale_rows = FALSE)
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 807),
    method = "UMAP", top_value_method = "ATC", top_n = 400, scale_rows = TRUE)

plot of chunk tab-dimension-reduction-by-depth-6

Signature heatmap

Signatures on the heatmap are the union of all signatures found on every node on the hierarchy. The number of k-means on rows are automatically selected by the function.

get_signatures(res_rh, merge_node = merge_node_param(min_n_signatures = 61))

plot of chunk tab-get-signatures-from-hierarchical-partition-1

get_signatures(res_rh, merge_node = merge_node_param(min_n_signatures = 131))

plot of chunk tab-get-signatures-from-hierarchical-partition-2

get_signatures(res_rh, merge_node = merge_node_param(min_n_signatures = 153))

plot of chunk tab-get-signatures-from-hierarchical-partition-3

get_signatures(res_rh, merge_node = merge_node_param(min_n_signatures = 169))

plot of chunk tab-get-signatures-from-hierarchical-partition-4

get_signatures(res_rh, merge_node = merge_node_param(min_n_signatures = 227))

plot of chunk tab-get-signatures-from-hierarchical-partition-5

get_signatures(res_rh, merge_node = merge_node_param(min_n_signatures = 807))

plot of chunk tab-get-signatures-from-hierarchical-partition-6

Compare signatures from different nodes:

compare_signatures(res_rh, verbose = FALSE)

plot of chunk unnamed-chunk-24

If there are too many signatures, top_signatures = ... can be set to only show the signatures with the highest FDRs. Note it only works on every node and the final signatures are the union of all signatures of all nodes.

# code only for demonstration
# e.g. to show the top 500 most significant rows on each node.
tb = get_signature(res_rh, top_signatures = 500)

Test to known annotations

Test correlation between subgroups and known annotations. If the known annotation is numeric, one-way ANOVA test is applied, and if the known annotation is discrete, chi-squared contingency table test is applied.

test_to_known_factors(res_rh, merge_node = merge_node_param(min_n_signatures = 61))
#>       Seurat_class
#> class            0
test_to_known_factors(res_rh, merge_node = merge_node_param(min_n_signatures = 131))
#>       Seurat_class
#> class            0
test_to_known_factors(res_rh, merge_node = merge_node_param(min_n_signatures = 153))
#>       Seurat_class
#> class            0
test_to_known_factors(res_rh, merge_node = merge_node_param(min_n_signatures = 169))
#>       Seurat_class
#> class            0
test_to_known_factors(res_rh, merge_node = merge_node_param(min_n_signatures = 227))
#>       Seurat_class
#> class            0
test_to_known_factors(res_rh, merge_node = merge_node_param(min_n_signatures = 807))
#>       Seurat_class
#> class            0

Results for each node


Node0

Child nodes: Node01-leaf , Node02 , Node03 , Node04 .

The object with results only for a single top-value method and a single partitioning method can be extracted as:

res = res_rh["0"]

A summary of res and all the functions that can be applied to it:

res
#> A 'DownSamplingConsensusPartition' object with k = 2, 3, 4.
#>   On a matrix with 3664 rows and 500 columns, randomly sampled from 2638 columns.
#>   Top rows (348) are extracted by 'ATC' method.
#>   Subgroups are detected by 'skmeans' method.
#>   Performed in total 150 partitions by row resampling.
#>   Best k for subgroups seems to be 4.
#> 
#> Following methods can be applied to this 'DownSamplingConsensusPartition' object:
#>  [1] "cola_report"             "collect_classes"         "collect_plots"          
#>  [4] "collect_stats"           "colnames"                "compare_partitions"     
#>  [7] "compare_signatures"      "consensus_heatmap"       "dimension_reduction"    
#> [10] "functional_enrichment"   "get_anno_col"            "get_anno"               
#> [13] "get_classes"             "get_consensus"           "get_matrix"             
#> [16] "get_membership"          "get_param"               "get_signatures"         
#> [19] "get_stats"               "is_best_k"               "is_stable_k"            
#> [22] "membership_heatmap"      "ncol"                    "nrow"                   
#> [25] "plot_ecdf"               "predict_classes"         "rownames"               
#> [28] "select_partition_number" "show"                    "suggest_best_k"         
#> [31] "test_to_known_factors"   "top_rows_heatmap"

collect_plots() function collects all the plots made from res for all k (number of subgroups) into one single page to provide an easy and fast comparison between different k.

collect_plots(res)

plot of chunk node-0-collect-plots

The plots are:

All the plots in panels can be made by individual functions and they are plotted later in this section.

select_partition_number() produces several plots showing different statistics for choosing “optimized” k. There are following statistics:

The detailed explanations of these statistics can be found in the cola vignette.

Generally speaking, higher 1-PAC score, higher mean silhouette score or higher concordance corresponds to better partition. Rand index and Jaccard index measure how similar the current partition is compared to partition with k-1. If they are too similar, we won't accept k is better than k-1.

select_partition_number(res)

plot of chunk node-0-select-partition-number

The numeric values for all these statistics can be obtained by get_stats().

get_stats(res)
#>   k 1-PAC mean_silhouette concordance area_increased  Rand Jaccard
#> 2 2     1           0.992       0.996          0.442 0.558   0.558
#> 3 3     1           0.975       0.990          0.319 0.826   0.698
#> 4 4     1           0.972       0.990          0.201 0.855   0.664

suggest_best_k() suggests the best \(k\) based on these statistics. The rules are as follows:

suggest_best_k(res)
#> [1] 4
#> attr(,"optional")
#> [1] 2 3

There is also optional best \(k\) = 2 3 that is worth to check.

Following is the table of the partitions (You need to click the show/hide code output link to see it). The membership matrix (columns with name p*) is inferred by clue::cl_consensus() function with the SE method. Basically the value in the membership matrix represents the probability to belong to a certain group. The finall subgroup label for an item is determined with the group with highest probability it belongs to.

In get_classes() function, the entropy is calculated from the membership matrix and the silhouette score is calculated from the consensus matrix.

show/hide code output

get_classes(res, k = 2)
#>                  class     p
#> AAACATACAACCAC-1     1 0.000
#> AAACATTGAGCTAC-1     1 0.000
#> AAACATTGATCAGC-1     1 0.000
#> AAACCGTGCTTCCG-1     2 0.000
#> AAACCGTGTATGCG-1     2 1.000
#> AAACGCACTGGTAC-1     1 0.000
#> AAACGCTGACCAGT-1     1 0.000
#> AAACGCTGGTTCTT-1     1 0.000
#> AAACGCTGTAGCCA-1     1 0.000
#> AAACGCTGTTTCTG-1     2 0.000
#> AAACTTGAAAAACG-1     1 0.000
#> AAACTTGATCCAGA-1     1 0.000
#> AAAGAGACGAGATA-1     1 0.000
#> AAAGAGACGCGAGA-1     2 0.000
#> AAAGAGACGGACTT-1     1 0.000
#> AAAGAGACGGCATT-1     1 0.000
#> AAAGCAGATATCGG-1     2 0.000
#> AAAGCCTGTATGCG-1     1 0.000
#> AAAGGCCTGTCTAG-1     1 0.000
#> AAAGTTTGATCACG-1     1 0.000
#> AAAGTTTGGGGTGA-1     1 0.000
#> AAAGTTTGTAGAGA-1     1 0.000
#> AAAGTTTGTAGCGT-1     2 0.000
#> AAATCAACAATGCC-1     1 0.000
#> AAATCAACACCAGT-1     1 0.000
#> AAATCAACCAGGAG-1     1 0.000
#> AAATCAACCCTATT-1     2 0.000
#> AAATCAACGGAAGC-1     1 0.000
#> AAATCAACTCGCAA-1     1 0.000
#> AAATCATGACCACA-1     2 0.000
#> AAATCCCTCCACAA-1     1 0.000
#> AAATCCCTGCTATG-1     1 0.000
#> AAATGTTGAACGAA-1     2 0.000
#> AAATGTTGCCACAA-1     1 1.000
#> AAATGTTGTGGCAT-1     2 0.000
#> AAATTCGAAGGTTC-1     1 0.000
#> AAATTCGAATCACG-1     2 0.000
#> AAATTCGAGCTGAT-1     2 0.000
#> AAATTCGAGGAGTG-1     1 0.000
#> AAATTCGATTCTCA-1     1 0.000
#> AAATTGACACGACT-1     1 0.000
#> AAATTGACTCGCTC-1     1 0.000
#> AACAAACTCATTTC-1     1 0.000
#> AACAAACTTTCGTT-1     1 0.000
#> AACAATACGACGAG-1     1 0.000
#> AACACGTGCAGAGG-1     1 0.000
#> AACACGTGGAAAGT-1     1 0.000
#> AACACGTGGAACCT-1     2 0.000
#> AACACGTGGCTACA-1     1 0.000
#> AACACGTGTACGAC-1     2 0.000
#> AACAGCACAAGAGT-1     2 0.502
#> AACATTGATGGGAG-1     2 0.000
#> AACCAGTGATACCG-1     2 0.000
#> AACCCAGATCGCTC-1     1 0.000
#> AACCGATGCTCCCA-1     1 0.000
#> AACCGATGGTCATG-1     1 0.000
#> AACCGATGTTCTAC-1     2 0.000
#> AACCGCCTAGCGTT-1     1 0.000
#> AACCGCCTCTACGA-1     2 0.000
#> AACCTACTGTGAGG-1     2 0.000
#> AACCTACTGTGTTG-1     1 0.000
#> AACCTTACGAGACG-1     1 0.000
#> AACCTTACGCGAGA-1     2 1.000
#> AACCTTACTAACGC-1     2 0.000
#> AACCTTTGGACGGA-1     1 0.000
#> AACCTTTGTACGCA-1     2 0.000
#> AACGCAACAAGTAG-1     1 0.000
#> AACGCATGACCCAA-1     1 0.000
#> AACGCATGCCTTCG-1     1 0.000
#> AACGCATGTACTTC-1     1 0.000
#> AACGCCCTCGGGAA-1     1 0.000
#> AACGCCCTCGTACA-1     2 0.747
#> AACGCCCTGGCATT-1     1 1.000
#> AACGTCGAGTATCG-1     2 1.000
#> AACGTGTGAAAGCA-1     1 0.000
#> AACGTGTGGCGGAA-1     1 0.000
#> AACGTGTGTCCAAG-1     1 0.000
#> AACGTGTGTGCTTT-1     1 0.000
#> AACTACCTTAGAGA-1     1 0.000
#> AACTCACTCAAGCT-1     2 0.000
#> AACTCACTTGGAGG-1     2 0.000
#> AACTCGGAAAGTGA-1     1 0.000
#> AACTCGGAAGGTCT-1     2 0.000
#> AACTCTTGCAGGAG-1     1 0.000
#> AACTGTCTCCCTTG-1     2 0.000
#> AACTTGCTACGCTA-1     1 0.000
#> AACTTGCTGGGACA-1     1 0.000
#> AAGAACGAGTGTTG-1     1 0.000
#> AAGAAGACGTAGGG-1     1 0.249
#> AAGACAGAAGTCTG-1     1 0.000
#> AAGACAGAGGATCT-1     1 0.000
#> AAGACAGATTACCT-1     2 0.000
#> AAGAGATGGGTAGG-1     1 0.000
#> AAGATGGAAAACAG-1     1 0.000
#> AAGATGGAGAACTC-1     2 0.000
#> AAGATGGAGATAAG-1     2 0.000
#> AAGATTACAACCTG-1     1 0.000
#> AAGATTACAGATCC-1     2 0.000
#> AAGATTACCCGTTC-1     2 0.000
#> AAGATTACCGCCTT-1     2 0.000
#> AAGATTACCTCAAG-1     2 0.502
#> AAGATTACTCCTCG-1     2 0.249
#> AAGCAAGAGCGAGA-1     1 0.000
#> AAGCAAGAGCTTAG-1     1 1.000
#> AAGCAAGAGGTGTT-1     1 1.000
#> AAGCACTGAGCAAA-1     1 0.000
#> AAGCACTGCATACG-1     1 0.000
#> AAGCACTGGTTCTT-1     1 0.000
#> AAGCCAACGTGTTG-1     1 0.000
#> AAGCCATGAACTGC-1     2 0.000
#> AAGCCATGACACGT-1     2 0.000
#> AAGCCATGCGTGAT-1     1 0.000
#> AAGCCATGTCTCGC-1     1 0.253
#> AAGCCTGACATGCA-1     1 0.502
#> AAGCCTGACCGAAT-1     2 0.000
#> AAGCGACTCCTCAC-1     2 0.000
#> AAGCGACTGTGTCA-1     1 0.000
#> AAGCGACTTACAGC-1     1 0.000
#> AAGCGACTTTGACG-1     2 0.000
#> AAGCGTACGTCTTT-1     1 0.000
#> AAGGCTTGCGAACT-1     1 0.000
#> AAGGTCACGGTTAC-1     2 0.000
#> AAGGTCACTGTTTC-1     1 0.000
#> AAGGTCACTTCCCG-1     1 0.000
#> AAGGTCTGACAGTC-1     1 0.000
#> AAGGTCTGCAGATC-1     1 0.000
#> AAGTAACTCTGAAC-1     2 0.000
#> AAGTAACTGAGATA-1     1 0.000
#> AAGTAGGATACAGC-1     2 1.000
#> AAGTATACCGAACT-1     1 0.000
#> AAGTCCGACTTGTT-1     1 0.000
#> AAGTCCGATAGAAG-1     1 0.000
#> AAGTCTCTAGTCGT-1     1 0.000
#> AAGTCTCTCGGAGA-1     1 0.000
#> AAGTGGCTTGGAGG-1     1 0.000
#> AAGTTCCTCATTCT-1     2 0.000
#> AAGTTCCTTCTTAC-1     1 0.000
#> AATAAGCTCGAATC-1     1 0.000
#> AATAAGCTCGTTGA-1     1 0.000
#> AATACCCTGGACGA-1     1 0.000
#> AATACCCTGGCATT-1     1 0.000
#> AATACTGAAAGGGC-1     1 0.498
#> AATACTGAATTGGC-1     1 1.000
#> AATAGGGAACCCTC-1     1 0.000
#> AATAGGGAGAATGA-1     1 0.253
#> AATCAAACTATCGG-1     1 0.000
#> AATCCGGAATGCTG-1     1 1.000
#> AATCCTACCGGTAT-1     1 0.000
#> AATCCTTGACGGGA-1     2 0.000
#> AATCCTTGGTGAGG-1     2 1.000
#> AATCGGTGGAACTC-1     1 0.000
#> AATCGGTGTGCTTT-1     1 0.000
#> AATCTAGAAAAGTG-1     1 0.000
#> AATCTAGAATCGGT-1     1 0.000
#> AATCTCACAGCCTA-1     2 0.000
#> AATCTCACTCTAGG-1     1 0.000
#> AATCTCTGAACAGA-1     1 0.000
#> AATCTCTGCTTTAC-1     1 1.000
#> AATGATACACCAAC-1     1 0.747
#> AATGATACGGTCAT-1     2 0.000
#> AATGCGTGACACCA-1     1 0.000
#> AATGCGTGGACGGA-1     2 0.000
#> AATGCGTGGCTATG-1     1 0.000
#> AATGGAGAATCGTG-1     2 0.000
#> AATGGAGATCCTTA-1     1 0.000
#> AATGGCTGACACCA-1     1 0.000
#> AATGGCTGCGTGAT-1     1 0.000
#> AATGGCTGTAAAGG-1     1 0.000
#> AATGGCTGTACTCT-1     1 1.000
#> AATGGCTGTGAAGA-1     1 0.000
#> AATGTAACGGTGGA-1     1 0.000
#> AATGTCCTCTTCTA-1     1 0.000
#> AATGTTGACAGTCA-1     1 0.000
#> AATGTTGAGTTGAC-1     2 0.000
#> AATGTTGATCTACT-1     1 0.000
#> AATTACGAATTCCT-1     2 0.000
#> AATTACGACTTCTA-1     1 0.000
#> AATTACGAGTGAGG-1     1 0.000
#> AATTACGATTGGCA-1     1 0.000
#> AATTCCTGCTCAGA-1     1 0.000
#> AATTGATGTCGCAA-1     2 0.000
#> AATTGTGACTTGGA-1     1 0.000
#> ACAAAGGAGGGTGA-1     1 0.000
#> ACAAATTGATTCTC-1     2 0.000
#> ACAAATTGCTCAGA-1     2 0.000
#> ACAAATTGTTGCGA-1     1 1.000
#> ACAACCGAGGGATG-1     1 1.000
#> ACAACCGAGTTACG-1     1 0.000
#> ACAAGAGAAGTCGT-1     2 0.000
#> ACAAGAGACTTATC-1     1 0.000
#> ACAAGAGAGTTGAC-1     1 0.000
#> ACAATCCTAACCGT-1     1 0.000
#> ACAATCCTTAGCGT-1     1 0.000
#> ACAATTGACTGACA-1     1 0.000
#> ACAATTGATGACTG-1     1 1.000
#> ACACAGACCATACG-1     1 0.000
#> ACACCAGAGGGCAA-1     1 0.000
#> ACACCCTGGTGTTG-1     2 1.000
#> ACACGAACAGTTCG-1     1 0.000
#> ACACGATGACGCAT-1     1 1.000
#> ACACGATGATGTGC-1     2 0.000
#> ACACGATGTCGTAG-1     1 0.000
#> ACACGATGTGGTCA-1     1 0.000
#> ACAGACACGGCATT-1     1 0.000
#> ACAGACACGTTGTG-1     1 0.000
#> ACAGCAACACCTAG-1     2 0.253
#> ACAGCAACCTCAAG-1     2 0.000
#> ACAGGTACCCCACT-1     1 0.000
#> ACAGGTACGCTGTA-1     1 0.000
#> ACAGGTACTGGTGT-1     2 0.000
#> ACAGTCGACCCAAA-1     1 0.000
#> ACAGTCGACCGATA-1     1 0.249
#> ACAGTGACTCACCC-1     1 0.000
#> ACAGTGACTCTATC-1     1 0.000
#> ACAGTGTGGTCACA-1     1 0.000
#> ACAGTGTGTTGCGA-1     2 0.000
#> ACATCACTCTACTT-1     2 0.000
#> ACATGGTGAAGCCT-1     1 0.000
#> ACATGGTGCAACCA-1     1 0.000
#> ACATGGTGCGAGTT-1     1 0.000
#> ACATTCTGGCATAC-1     1 0.000
#> ACATTCTGGGAACG-1     2 0.000
#> ACCAACGACATGCA-1     1 0.000
#> ACCACAGAAAGTAG-1     1 0.000
#> ACCACAGAGTTGGT-1     1 0.000
#> ACCACCTGTGTGCA-1     1 0.000
#> ACCACGCTACAGCT-1     1 0.000
#> ACCACGCTACCCAA-1     1 0.000
#> ACCACGCTGCGAGA-1     1 0.000
#> ACCACGCTGCTGTA-1     1 0.000
#> ACCAGCCTGACAGG-1     1 0.000
#> ACCAGTGAACGGTT-1     1 0.000
#> ACCAGTGAATACCG-1     2 0.000
#> ACCAGTGAGGGATG-1     1 0.000
#> ACCAGTGATGACTG-1     2 0.000
#> ACCATTACCTTCTA-1     1 0.000
#> ACCATTACGAGATA-1     1 1.000
#> ACCATTTGTCATTC-1     1 0.000
#> ACCCAAGAACTGTG-1     1 1.000
#> ACCCAAGAATTCCT-1     2 0.000
#> ACCCAAGAGGACAG-1     1 0.000
#> ACCCAAGATTCACT-1     1 0.000
#> ACCCACTGCGCCTT-1     2 0.000
#> ACCCACTGGACAGG-1     1 0.000
#> ACCCACTGGTTCAG-1     2 1.000
#> ACCCACTGTCGTAG-1     2 0.000
#> ACCCAGCTCAGAAA-1     1 0.000
#> ACCCAGCTGTTAGC-1     2 0.000
#> ACCCAGCTTGCTTT-1     1 0.000
#> ACCCGTTGATGACC-1     1 0.000
#> ACCCGTTGCTGCAA-1     1 0.000
#> ACCCGTTGCTTCTA-1     1 0.000
#> ACCCTCGACCTATT-1     1 0.498
#> ACCCTCGACGGTAT-1     1 0.000
#> ACCCTCGATAAGGA-1     2 0.000
#> ACCCTCGATCAAGC-1     2 0.000
#> ACCGTGCTACCAGT-1     1 0.000
#> ACCGTGCTGGAACG-1     1 0.000
#> ACCTATTGCTGAGT-1     1 0.751
#> ACCTATTGTGCCCT-1     2 0.000
#> ACCTCCGAGTCCTC-1     1 0.000
#> ACCTCCGATATGCG-1     1 0.000
#> ACCTCCGATGCTGA-1     1 0.000
#> ACCTCGTGAACCAC-1     1 0.000
#> ACCTGAGATATCGG-1     2 0.000
#> ACCTGGCTAAGTAG-1     2 0.000
#> ACCTTTGACTCCCA-1     2 0.000
#> ACCTTTGAGGAACG-1     2 0.000
#> ACCTTTGAGGAAGC-1     2 0.000
#> ACGAACACCTTGTT-1     2 1.000
#> ACGAACTGGCTATG-1     2 0.000
#> ACGAAGCTCTCCAC-1     1 0.000
#> ACGAAGCTCTGAGT-1     1 0.249
#> ACGACCCTATCTCT-1     2 0.000
#> ACGACCCTGATGAA-1     1 0.000
#> ACGACCCTTGACAC-1     1 0.000
#> ACGACCCTTGACCA-1     1 0.000
#> ACGAGGGACAGGAG-1     2 0.000
#> ACGAGGGACGAACT-1     1 0.000
#> ACGAGGGATGTAGC-1     1 0.000
#> ACGAGTACCCTAAG-1     1 0.000
#> ACGAGTACGAATCC-1     1 0.000
#> ACGATCGAGGACTT-1     1 0.000
#> ACGATCGAGTCACA-1     2 0.000
#> ACGATGACAATGCC-1     1 0.000
#> ACGATGACTGGTCA-1     1 0.000
#> ACGATTCTACGGGA-1     1 0.000
#> ACGCAATGGTTCAG-1     1 1.000
#> ACGCACCTGTTAGC-1     1 0.000
#> ACGCCACTGAACTC-1     2 1.000
#> ACGCCGGAAACCAC-1     2 0.000
#> ACGCCGGAAAGCCT-1     1 0.000
#> ACGCCGGAAATGCC-1     1 0.000
#> ACGCCTTGCTCCCA-1     2 0.000
#> ACGCGGTGGCGAGA-1     1 0.000
#> ACGCGGTGTGTGGT-1     1 0.000
#> ACGCGGTGTTTGCT-1     1 0.249
#> ACGCTCACAGTACC-1     1 0.000
#> ACGCTCACCCTTGC-1     1 0.000
#> ACGCTGCTGTTCTT-1     2 0.000
#> ACGGAACTCAGATC-1     2 1.000
#> ACGGAACTGTCGTA-1     2 0.000
#> ACGGAGGACTCTTA-1     2 0.000
#> ACGGATTGGGAGGT-1     1 0.000
#> ACGGATTGGTTAGC-1     1 0.000
#> ACGGCTCTGAGCAG-1     1 0.000
#> ACGGCTCTTGCACA-1     1 0.000
#> ACGGTAACCGCTAA-1     1 0.000
#> ACGGTAACCTTCGC-1     1 0.000
#> ACGGTAACGGTGGA-1     1 0.000
#> ACGGTAACTCGCAA-1     1 0.000
#> ACGGTATGAGTCGT-1     2 0.000
#> ACGGTATGGGTATC-1     1 0.000
#> ACGGTATGGTTGTG-1     1 0.000
#> ACGGTCCTAACGGG-1     1 0.000
#> ACGGTCCTCGGGAA-1     1 0.000
#> ACGTAGACAACCAC-1     1 0.000
#> ACGTAGACTACAGC-1     1 0.000
#> ACGTCAGAAACGAA-1     1 0.000
#> ACGTCAGAGAGCTT-1     2 0.000
#> ACGTCAGAGGGATG-1     1 0.000
#> ACGTCCTGATAAGG-1     2 0.000
#> ACGTCCTGTGAACC-1     2 0.000
#> ACGTCGCTCCTGAA-1     2 0.000
#> ACGTCGCTCTATTC-1     2 1.000
#> ACGTCGCTTCTCAT-1     1 0.000
#> ACGTGATGCCATGA-1     2 0.000
#> ACGTGATGGGTCTA-1     1 0.000
#> ACGTGATGTAACCG-1     2 0.000
#> ACGTGATGTGACAC-1     2 1.000
#> ACGTGCCTCCGTAA-1     1 0.000
#> ACGTGCCTTCTATC-1     1 0.249
#> ACGTTACTTTCCAT-1     1 0.000
#> ACGTTGGAAAAGCA-1     1 0.000
#> ACGTTGGAAACCTG-1     1 0.249
#> ACGTTGGACCGTAA-1     2 0.000
#> ACGTTGGAGCCAAT-1     2 1.000
#> ACGTTGGATATGGC-1     1 0.000
#> ACGTTGGATCAGGT-1     2 0.000
#> ACGTTTACATCAGC-1     1 0.000
#> ACTAAAACCCACAA-1     1 0.000
#> ACTAAAACTCGACA-1     2 0.000
#> ACTACGGAATTTCC-1     1 0.000
#> ACTACGGACCTATT-1     1 0.000
#> ACTACGGATCGCTC-1     1 0.000
#> ACTACTACTAAGGA-1     1 0.000
#> ACTAGGTGGAACCT-1     1 0.000
#> ACTAGGTGGAACTC-1     1 0.000
#> ACTATCACCTTGGA-1     1 0.000
#> ACTATCACTGCCAA-1     1 0.000
#> ACTCAGGACTGAAC-1     1 0.000
#> ACTCAGGATCTATC-1     1 0.000
#> ACTCAGGATTCGTT-1     2 1.000
#> ACTCCTCTCAACTG-1     1 0.000
#> ACTCGCACGAAAGT-1     2 0.000
#> ACTCGCACTACGAC-1     2 0.000
#> ACTCTCCTGACACT-1     1 0.000
#> ACTCTCCTGCATAC-1     1 0.000
#> ACTCTCCTGTTTGG-1     1 0.000
#> ACTGAGACAACCAC-1     1 0.000
#> ACTGAGACCCATAG-1     2 0.000
#> ACTGAGACGTTGGT-1     1 0.000
#> ACTGCCACACACGT-1     1 0.751
#> ACTGCCACTCCGTC-1     2 1.000
#> ACTGGCCTTCAGTG-1     2 1.000
#> ACTGTGGACGTGTA-1     1 0.000
#> ACTGTGGATCTAGG-1     1 0.000
#> ACTGTTACCCACAA-1     2 0.000
#> ACTGTTACTGCAGT-1     1 0.000
#> ACTTAAGAACCACA-1     1 0.000
#> ACTTAAGATTACTC-1     2 0.000
#> ACTTAGCTGCGTAT-1     2 0.000
#> ACTTAGCTGGGAGT-1     1 0.000
#> ACTTCAACAAGCAA-1     1 1.000
#> ACTTCAACGTAGGG-1     1 1.000
#> ACTTCCCTTTCCGC-1     1 0.000
#> ACTTCTGACATGCA-1     1 0.000
#> ACTTGACTCCACAA-1     1 0.000
#> ACTTGGGAGAAAGT-1     2 0.000
#> ACTTGGGAGGTTTG-1     1 0.000
#> ACTTGGGATGTGAC-1     2 0.000
#> ACTTGGGATTGACG-1     2 0.000
#> ACTTGTACCTGTCC-1     1 0.000
#> ACTTTGTGGAAAGT-1     1 0.000
#> ACTTTGTGGATAGA-1     2 0.000
#> AGAAACGAAAGTAG-1     1 0.000
#> AGAAAGTGCGCAAT-1     1 0.000
#> AGAAAGTGGGGATG-1     2 0.000
#> AGAACAGAAATGCC-1     2 1.000
#> AGAACAGACGACTA-1     1 0.000
#> AGAACAGAGACAAA-1     1 0.000
#> AGAACGCTTTGCTT-1     1 0.000
#> AGAAGATGTGACTG-1     1 0.000
#> AGAATGGAAGAAGT-1     1 0.000
#> AGAATTTGTAACCG-1     1 0.000
#> AGAATTTGTAGAGA-1     1 0.000
#> AGACACACTGTAGC-1     1 0.000
#> AGACACTGTCAAGC-1     2 0.000
#> AGACCTGAAGTAGA-1     2 0.000
#> AGACCTGACCAACA-1     1 0.000
#> AGACCTGAGGAAGC-1     1 0.000
#> AGACGTACAGAGGC-1     1 0.000
#> AGACGTACCCCTAC-1     1 0.000
#> AGACGTACCTCTTA-1     2 0.000
#> AGACGTACTCGTGA-1     2 0.000
#> AGACTGACCATCAG-1     1 0.000
#> AGACTGACCCTTTA-1     1 0.000
#> AGACTTCTCATGCA-1     1 0.000
#> AGAGATGACAGTCA-1     1 0.000
#> AGAGATGACTGAAC-1     1 0.000
#> AGAGATGAGGTTTG-1     2 0.000
#> AGAGATGATCTCGC-1     1 0.000
#> AGAGATGATTGTGG-1     1 0.000
#> AGAGCGGAGGCAAG-1     2 0.000
#> AGAGTCTGGTCGTA-1     2 0.000
#> AGAGTGCTCAGCTA-1     1 0.000
#> AGAGTGCTCGAATC-1     1 0.000
#> AGAGTGCTGTCATG-1     1 0.000
#> AGAGTGCTGTCCTC-1     1 0.000
#> AGAGTGCTGTGTTG-1     1 0.000
#> AGATATACCCGTAA-1     2 0.502
#> AGATATACGATGAA-1     1 0.000
#> AGATATACTGTTCT-1     1 0.000
#> AGATATTGCCTACC-1     1 0.000
#> AGATATTGGCCAAT-1     2 0.000
#> AGATCGTGTCTGGA-1     2 0.000
#> AGATCGTGTTTGTC-1     1 0.000
#> AGATCTCTATCACG-1     1 0.000
#> AGATTAACGTTCTT-1     2 0.000
#> AGATTCCTATCGTG-1     1 0.000
#> AGATTCCTCACTTT-1     2 0.000
#> AGATTCCTGACGAG-1     2 0.000
#> AGATTCCTGTTCAG-1     2 1.000
#> AGCAAAGATATGCG-1     1 0.000
#> AGCACAACAGTCTG-1     1 0.000
#> AGCACTGAGGGAGT-1     1 0.000
#> AGCACTGATATGCG-1     1 0.000
#> AGCACTGATGCTTT-1     2 0.000
#> AGCACTGATTGCGA-1     1 0.000
#> AGCATCGAAGATCC-1     1 0.000
#> AGCATCGAAGGGTG-1     1 0.000
#> AGCATCGAGCTTCC-1     2 0.000
#> AGCATCGAGTGAGG-1     1 0.000
#> AGCATCGATAACCG-1     2 0.000
#> AGCATGACGATGAA-1     1 0.000
#> AGCCAATGGGGAGT-1     2 0.000
#> AGCCAATGTATCTC-1     1 0.000
#> AGCCACCTGGATCT-1     1 0.000
#> AGCCGGTGCCAATG-1     1 0.000
#> AGCCGGTGTGTTTC-1     1 0.000
#> AGCCGTCTCAATCG-1     1 0.000
#> AGCCGTCTGAGAGC-1     1 0.000
#> AGCCTCACGTTCGA-1     1 0.000
#> AGCCTCACTGTCAG-1     2 0.000
#> AGCCTCTGCAGTTG-1     1 0.000
#> AGCCTCTGCCAATG-1     1 1.000
#> AGCGAACTGGATCT-1     1 0.000
#> AGCGAACTTACTGG-1     1 0.000
#> AGCGATACGGAGCA-1     1 0.000
#> AGCGATTGAGATCC-1     2 1.000
#> AGCGCCGAATCTCT-1     1 0.000
#> AGCGCCGACAGAGG-1     1 0.249
#> AGCGCTCTACCTTT-1     1 0.000
#> AGCGGCACCGGGAA-1     1 0.000
#> AGCGGCTGATGTGC-1     1 0.000
#> AGCGGGCTTGCCAA-1     1 0.000
#> AGCGTAACATGCTG-1     1 0.000
#> AGCGTAACTGAGAA-1     2 0.000
#> AGCTCGCTACTGGT-1     1 0.000
#> AGCTCGCTCTGCTC-1     1 0.000
#> AGCTGAACCATACG-1     2 0.000
#> AGCTGAACCTCTCG-1     1 0.000
#> AGCTGCCTTGGGAG-1     2 0.000
#> AGCTGCCTTTCATC-1     1 0.000
#> AGCTGCCTTTCTGT-1     1 0.000
#> AGCTGTGATCCAAG-1     1 0.000
#> AGCTTTACAAGTAG-1     1 0.000
#> AGCTTTACACCAAC-1     1 0.000
#> AGCTTTACTCTCAT-1     1 0.000
#> AGGAAATGAGGAGC-1     1 0.000
#> AGGAACCTCTTAGG-1     2 0.000
#> AGGAACCTTGCCTC-1     1 0.000
#> AGGAATGATAACGC-1     1 0.000
#> AGGAATGATTTGTC-1     1 0.000
#> AGGAGTCTGGTTTG-1     1 0.000
#> AGGAGTCTTGTCAG-1     1 0.000
#> AGGATAGACATTTC-1     1 0.000
#> AGGATAGAGGATTC-1     1 0.751
#> AGGATGCTACTAGC-1     1 0.000
#> AGGATGCTTTAGGC-1     2 1.000
#> AGGCAACTGAAGGC-1     1 0.000
#> AGGCAGGAGTACCA-1     1 0.000
#> AGGCCTCTAGTCGT-1     1 0.000
#> AGGCCTCTCGGAGA-1     1 0.000
#> AGGCCTCTCGTAAC-1     1 0.000
#> AGGGACGACGTTGA-1     1 0.000
#> AGGGACGAGTCAAC-1     2 1.000
#> AGGGACGAGTTGTG-1     1 0.000
#> AGGGACGATAGAGA-1     1 0.000
#> AGGGACGATGCATG-1     1 0.000
#> AGGGAGTGAGCCTA-1     1 0.000
#> AGGGCCACCATACG-1     1 0.000
#> AGGGCGCTAACCAC-1     2 0.000
#> AGGGCGCTATGGTC-1     1 0.747
#> AGGGTGGACAGTCA-1     1 0.000
#> AGGGTGGACTCAAG-1     2 0.000
#> AGGGTGGAGTTGCA-1     1 0.000
#> AGGGTTTGTTCATC-1     2 0.000
#> AGGTCATGAGTGTC-1     1 0.000
#> AGGTCATGCTTATC-1     1 0.000
#> AGGTCTGATTCTCA-1     2 0.000
#> AGGTGGGAAGAATG-1     1 0.000
#> AGGTGGGAAGTTCG-1     1 0.000
#> AGGTGTTGGTTACG-1     1 0.000
#> AGGTTCGAACCTCC-1     2 0.000
#> AGGTTCGAACGTAC-1     2 0.000
#> AGGTTCGAGGGTGA-1     1 0.000
#> AGTAAGGAGTTTGG-1     1 0.000
#> AGTAAGGATTCTTG-1     1 0.000
#> AGTAATACATCACG-1     1 0.000
#> AGTAATACCGAACT-1     1 0.000
#> AGTAATTGTCCCAC-1     1 0.000
#> AGTACGTGAGGGTG-1     1 0.000
#> AGTACGTGCTGCAA-1     1 0.000
#> AGTACGTGCTTGGA-1     1 0.000
#> AGTACTCTACGTGT-1     1 0.000
#> AGTACTCTCAACCA-1     1 0.751
#> AGTACTCTCGGTAT-1     1 0.000
#> AGTAGGCTTGCCTC-1     2 0.000
#> AGTATAACTTGTCT-1     2 0.000
#> AGTATCCTAGAACA-1     1 0.000
#> AGTCACGATGAGCT-1     1 0.751
#> AGTCAGACGAATAG-1     1 0.000
#> AGTCAGACGCTTAG-1     1 0.000
#> AGTCAGACTAGAGA-1     1 0.000
#> AGTCAGACTGCACA-1     1 0.000
#> AGTCCAGATATCTC-1     1 0.000
#> AGTCCAGATTTCAC-1     1 0.000
#> AGTCGAACCAACCA-1     1 0.000
#> AGTCGCCTCCGTAA-1     1 0.000
#> AGTCTACTAGGGTG-1     2 0.000
#> AGTCTACTTGCATG-1     2 0.000
#> AGTCTTACACCACA-1     1 0.000
#> AGTCTTACTTCGCC-1     1 0.000
#> AGTCTTACTTCGGA-1     2 1.000
#> AGTGACTGCAACTG-1     2 0.000
#> AGTGTTCTAACCTG-1     1 0.000
#> AGTGTTCTATAAGG-1     1 0.000
#> AGTGTTCTCACTTT-1     2 0.000
#> AGTTAAACCACTTT-1     1 0.000
#> AGTTATGAACAGTC-1     2 0.000
#> AGTTATGACTGAGT-1     1 0.000
#> AGTTATGAGTTCAG-1     1 0.000
#> AGTTCTACCAGCTA-1     2 0.000
#> AGTTCTTGAAGCCT-1     1 0.000
#> AGTTGTCTACTACG-1     1 0.000
#> AGTTTAGATGGTCA-1     1 0.000
#> AGTTTCACGGTCTA-1     2 1.000
#> AGTTTGCTACAGTC-1     1 0.000
#> AGTTTGCTACTGGT-1     1 0.000
#> AGTTTGCTCCAAGT-1     1 0.000
#> ATAAACACAGTGCT-1     1 0.249
#> ATAAACACCACCAA-1     1 0.000
#> ATAACAACATGCTG-1     2 0.000
#> ATAACAACGTCTAG-1     1 0.000
#> ATAACAACTTTGTC-1     1 0.000
#> ATAACATGTACTCT-1     1 0.000
#> ATAACCCTGTTGGT-1     1 0.000
#> ATAACCCTTGGTAC-1     1 0.000
#> ATAAGTACGAATGA-1     1 0.000
#> ATAAGTTGGTACGT-1     2 0.000
#> ATAAGTTGTCTAGG-1     1 0.000
#> ATAATCGAGCTGAT-1     1 0.000
#> ATAATCGATGGTTG-1     1 0.000
#> ATAATGACCTACTT-1     1 0.000
#> ATAATGACTCGTGA-1     2 0.000
#> ATACAATGTTAGGC-1     1 0.000
#> ATACCACTCGTACA-1     2 0.000
#> ATACCACTCTAAGC-1     2 0.000
#> ATACCACTGCCAAT-1     1 0.502
#> ATACCGGAATGCTG-1     2 0.000
#> ATACCGGACATTTC-1     2 0.000
#> ATACCGGACTTCGC-1     1 0.000
#> ATACCGGAGGTGTT-1     2 0.000
#> ATACCGGATCTCGC-1     1 0.000
#> ATACCTACGCATCA-1     1 0.000
#> ATACCTTGGGGCAA-1     1 0.000
#> ATACGGACAGACTC-1     2 0.000
#> ATACGGACCTACTT-1     2 0.000
#> ATACGGACGAGGTG-1     1 0.000
#> ATACGGACTATGCG-1     1 0.000
#> ATACGGACTCTGGA-1     2 0.000
#> ATACGTCTTAACGC-1     2 0.000
#> ATACTCTGCTTCGC-1     2 0.000
#> ATACTCTGGTATGC-1     2 1.000
#> ATAGATACCATGGT-1     1 0.000
#> ATAGATACGACGAG-1     1 0.000
#> ATAGATTGGTGTAC-1     1 0.000
#> ATAGCCGAACGGAG-1     1 0.000
#> ATAGCGTGCAGATC-1     1 0.000
#> ATAGCGTGCCCTTG-1     2 0.000
#> ATAGCGTGGTATCG-1     2 0.253
#> ATAGCGTGTCTCTA-1     1 0.000
#> ATAGCTCTCTGATG-1     1 0.000
#> ATAGCTCTGAGGTG-1     1 0.000
#> ATAGGAGAAACAGA-1     2 0.000
#> ATAGGCTGTCAGAC-1     1 0.000
#> ATAGTCCTAGTGTC-1     2 0.000
#> ATAGTCCTTGCATG-1     1 0.000
#> ATAGTCCTTGTCGA-1     1 0.000
#> ATAGTTGACAACTG-1     1 0.000
#> ATAGTTGACCCTCA-1     2 0.000
#> ATAGTTGAGACGTT-1     1 0.000
#> ATAGTTGATAAGCC-1     1 0.000
#> ATATACGAAGCCAT-1     1 0.000
#> ATATACGAATTGGC-1     1 0.000
#> ATATAGTGGAATGA-1     2 0.000
#> ATATGCCTAGATCC-1     2 0.000
#> ATATGCCTGGACAG-1     1 0.000
#> ATATGCCTTCTCTA-1     1 0.000
#> ATATGCCTTGGTAC-1     1 0.000
#> ATCAAATGAGCCTA-1     2 0.000
#> ATCAAATGGGTAAA-1     2 0.000
#> ATCAACCTAAACGA-1     1 0.000
#> ATCAACCTGAGGAC-1     1 0.000
#> ATCAACCTTCTCTA-1     1 0.000
#> ATCAACCTTTGTCT-1     1 0.000
#> ATCACACTTTGTCT-1     1 0.000
#> ATCACGGATTTCGT-1     1 0.000
#> ATCATCTGACACCA-1     2 1.000
#> ATCATGCTAGAGTA-1     1 0.249
#> ATCATGCTGAACCT-1     1 0.000
#> ATCCAGGACGCTAA-1     2 0.000
#> ATCCAGGATGGAAA-1     1 0.000
#> ATCCATACTCCTTA-1     2 0.000
#> ATCCATACTTCATC-1     2 0.000
#> ATCCCGTGCAGTCA-1     2 1.000
#> ATCCCGTGCATGCA-1     1 0.000
#> ATCCCGTGGCTGAT-1     1 0.000
#> ATCCGCACGCATCA-1     1 0.000
#> ATCCTAACGACGGA-1     1 0.000
#> ATCCTAACGCTACA-1     1 1.000
#> ATCGACGAAACTGC-1     2 0.000
#> ATCGACGAATGACC-1     1 0.000
#> ATCGAGTGGACGTT-1     1 0.000
#> ATCGCAGAATCTCT-1     2 0.000
#> ATCGCAGAGTGTCA-1     1 0.000
#> ATCGCCACTGAGGG-1     1 0.249
#> ATCGCCTGGGTCAT-1     1 0.000
#> ATCGCCTGTGGCAT-1     1 0.000
#> ATCGCGCTCAGAGG-1     2 0.000
#> ATCGCGCTGGGATG-1     1 0.000
#> ATCGCGCTTTTCGT-1     1 0.000
#> ATCGGAACCAGTCA-1     1 0.000
#> ATCGGTGAGTCAAC-1     1 0.000
#> ATCGGTGATTGCAG-1     1 0.000
#> ATCGTTTGCCTACC-1     2 0.000
#> ATCGTTTGGGTACT-1     2 0.000
#> ATCGTTTGTGCCAA-1     2 0.253
#> ATCTACACCCGCTT-1     2 0.000
#> ATCTACACCGGGAA-1     1 0.000
#> ATCTCAACAGGAGC-1     1 0.000
#> ATCTCAACCTCGAA-1     1 0.000
#> ATCTCAACCTTGTT-1     2 0.000
#> ATCTGGGAAACCAC-1     2 0.000
#> ATCTGGGAAGTGTC-1     2 0.000
#> ATCTGGGATTCCGC-1     1 0.000
#> ATCTGTTGAACGGG-1     1 0.000
#> ATCTGTTGACCTCC-1     1 0.000
#> ATCTGTTGCCTTCG-1     2 0.000
#> ATCTGTTGGTTGCA-1     1 0.000
#> ATCTTGACACCAAC-1     1 0.000
#> ATCTTGACCTCCCA-1     2 0.000
#> ATCTTTCTGCATCA-1     1 0.000
#> ATCTTTCTGTTTCT-1     1 0.000
#> ATCTTTCTTGTCCC-1     2 1.000
#> ATGAAACTCTGTGA-1     1 0.000
#> ATGAAACTGAGGCA-1     1 0.000
#> ATGAAGGAACAGCT-1     1 0.000
#> ATGAAGGACCTGTC-1     1 0.000
#> ATGAAGGACCTTAT-1     1 0.000
#> ATGAAGGACTAGTG-1     1 0.000
#> ATGAAGGACTTGCC-1     2 1.000
#> ATGACGTGACGACT-1     1 0.000
#> ATGACGTGATCGGT-1     2 0.000
#> ATGAGAGAAAGTGA-1     1 0.000
#> ATGAGAGAACGCAT-1     1 0.000
#> ATGAGAGAAGTAGA-1     1 0.000
#> ATGAGCACACAGCT-1     1 0.000
#> ATGAGCACATCTTC-1     1 0.000
#> ATGATAACTTCACT-1     2 0.498
#> ATGATATGAAACAG-1     1 0.000
#> ATGATATGACTGGT-1     1 0.000
#> ATGATATGAGCACT-1     1 0.000
#> ATGATATGGTCATG-1     1 0.000
#> ATGATATGGTGCTA-1     1 1.000
#> ATGATATGTTGTCT-1     2 0.000
#> ATGCACGAATGTCG-1     1 0.000
#> ATGCACGACTGTAG-1     1 0.000
#> ATGCACGAGAACCT-1     1 0.000
#> ATGCACGAGTTCGA-1     1 0.000
#> ATGCACGATTGGTG-1     2 0.000
#> ATGCAGTGTTACCT-1     1 0.000
#> ATGCAGTGTTCTAC-1     1 0.000
#> ATGCCAGAACGACT-1     1 0.000
#> ATGCCAGACAGTCA-1     2 0.000
#> ATGCCGCTTGAACC-1     2 0.000
#> ATGCGATGCTATGG-1     2 0.000
#> ATGCGATGCTGAGT-1     1 0.000
#> ATGCGATGGTTACG-1     1 0.000
#> ATGCGCCTTCATTC-1     1 0.000
#> ATGCTTTGCGAATC-1     1 0.000
#> ATGCTTTGGGCGAA-1     1 0.000
#> ATGCTTTGTAGTCG-1     1 0.000
#> ATGGACACATCGGT-1     1 0.000
#> ATGGACACGCATCA-1     2 1.000
#> ATGGGTACAACCTG-1     1 0.000
#> ATGGGTACATCGGT-1     2 1.000
#> ATGGGTACTATTCC-1     1 0.000
#> ATGGGTACTGGGAG-1     1 0.000
#> ATGTAAACACCTCC-1     1 0.000
#> ATGTAAACCCGCTT-1     1 0.000
#> ATGTAAACGGGATG-1     2 0.000
#> ATGTAAACTCTCCG-1     1 0.000
#> ATGTAAACTTCACT-1     2 0.000
#> ATGTACCTCAGTCA-1     1 0.000
#> ATGTACCTTAGTCG-1     1 0.000
#> ATGTACCTTTATCC-1     2 0.000
#> ATGTACCTTTCACT-1     1 0.498
#> ATGTCACTAATGCC-1     2 0.000
#> ATGTCACTCTGCTC-1     1 0.000
#> ATGTCGGAGGTGAG-1     1 0.000
#> ATGTTCACAGTCTG-1     2 0.000
#> ATGTTCACCGTAGT-1     1 0.000
#> ATGTTGCTTTCAGG-1     1 0.000
#> ATTAACGATGAGAA-1     1 1.000
#> ATTAACGATGCAAC-1     1 0.751
#> ATTAAGACTGCAGT-1     1 0.000
#> ATTACCTGCCTTAT-1     2 0.000
#> ATTACCTGGAGGAC-1     2 0.000
#> ATTAGATGTTTCAC-1     1 0.000
#> ATTATGGAATCTCT-1     1 0.000
#> ATTCAAGAACGGGA-1     1 0.000
#> ATTCAAGACCTTTA-1     1 0.000
#> ATTCAGCTCATTGG-1     2 1.000
#> ATTCCAACCATTGG-1     2 0.000
#> ATTCCAACTTAGGC-1     1 1.000
#> ATTCGACTCACTAG-1     1 0.000
#> ATTCGACTGAATAG-1     2 0.000
#> ATTCGACTTTTGTC-1     2 0.000
#> ATTCGGGAAAGGCG-1     2 0.000
#> ATTCGGGATTAGGC-1     1 0.000
#> ATTCTTCTGATACC-1     1 0.000
#> ATTGAATGGACGGA-1     1 0.000
#> ATTGATGAAGGTTC-1     1 0.000
#> ATTGATGACTGAGT-1     1 0.000
#> ATTGATGAGCGAAG-1     1 0.000
#> ATTGATGATCTATC-1     1 0.000
#> ATTGCACTGACGGA-1     1 0.000
#> ATTGCACTGAGAGC-1     2 0.000
#> ATTGCACTGGAGCA-1     2 0.000
#> ATTGCACTTAGCCA-1     1 0.000
#> ATTGCACTTGCTTT-1     2 0.000
#> ATTGCTTGTTACTC-1     1 0.000
#> ATTGGTCTGACTAC-1     1 1.000
#> ATTGGTCTTGTCTT-1     1 0.000
#> ATTGTAGATTCCCG-1     2 0.000
#> ATTGTAGATTGCAG-1     1 0.000
#> ATTGTCTGCGTACA-1     1 0.000
#> ATTTAGGAACCATG-1     2 0.000
#> ATTTAGGACAGAGG-1     1 0.000
#> ATTTCCGAGATGAA-1     1 0.000
#> ATTTCCGAGTGCTA-1     1 0.000
#> ATTTCGTGTATGGC-1     1 0.000
#> ATTTCTCTACTTTC-1     2 0.000
#> ATTTCTCTAGCAAA-1     1 0.000
#> ATTTCTCTCACTTT-1     2 0.000
#> ATTTCTCTTCCCAC-1     1 0.000
#> ATTTGCACAAGATG-1     2 0.000
#> CAAAGCACAGCTCA-1     1 0.000
#> CAAAGCACCGTAAC-1     1 0.000
#> CAAAGCACGGTAAA-1     2 1.000
#> CAAAGCTGAAAGTG-1     1 0.000
#> CAAAGCTGTTGCTT-1     2 0.000
#> CAAATATGTGACAC-1     1 0.000
#> CAAATTGAGGGCAA-1     1 0.000
#> CAAATTGATGGAGG-1     2 0.000
#> CAACCAGAAAAGTG-1     1 0.000
#> CAACCAGAAGTGCT-1     1 0.000
#> CAACCAGAGTTCAG-1     2 0.000
#> CAACCAGATAGAAG-1     2 0.498
#> CAACCGCTGTTCAG-1     1 0.000
#> CAACCGCTTTGAGC-1     1 0.000
#> CAACGATGCGCAAT-1     2 0.000
#> CAACGTGACTCCAC-1     2 0.000
#> CAACGTGAGCCATA-1     1 0.751
#> CAACGTGATCAAGC-1     2 0.000
#> CAAGAAGACCACAA-1     1 1.000
#> CAAGAAGACGTCTC-1     2 0.000
#> CAAGAAGATTCTAC-1     1 0.000
#> CAAGACTGACCTGA-1     1 0.000
#> CAAGACTGAGTAGA-1     1 0.000
#> CAAGCTGACCATAG-1     2 0.000
#> CAAGCTGATCTATC-1     1 1.000
#> CAAGGACTGTTCAG-1     1 0.000
#> CAAGGACTTCTTTG-1     1 0.000
#> CAAGGTTGCTCCAC-1     1 0.000
#> CAAGGTTGTCATTC-1     1 0.000
#> CAAGGTTGTCTGGA-1     2 1.000
#> CAAGTCGAAACAGA-1     1 0.000
#> CAAGTCGATAGCGT-1     2 0.000
#> CAATAAACGCCATA-1     2 0.000
#> CAATAATGAACTGC-1     2 0.000
#> CAATATGACATGGT-1     1 0.000
#> CAATATGACCTTCG-1     1 1.000
#> CAATATGACGTTAG-1     1 0.000
#> CAATATGAGGAGCA-1     1 0.000
#> CAATCGGAGAAACA-1     1 0.000
#> CAATCTACTGACTG-1     2 1.000
#> CAATTCACCCAACA-1     1 0.000
#> CAATTCACGATAGA-1     1 0.000
#> CAATTCACTTGTGG-1     1 0.000
#> CAATTCTGCTTGTT-1     2 0.000
#> CAATTCTGGCGTAT-1     2 0.000
#> CACAACGATACGAC-1     1 0.000
#> CACAATCTTGTTCT-1     1 0.000
#> CACAATCTTTCCAT-1     1 0.000
#> CACACCTGCTTGAG-1     1 0.000
#> CACACCTGTATGGC-1     1 0.000
#> CACAGAACCCTTGC-1     1 0.000
#> CACAGAACCTGATG-1     1 0.000
#> CACAGATGGGATTC-1     1 0.000
#> CACAGATGGTTTCT-1     2 0.000
#> CACAGCCTGATACC-1     1 0.000
#> CACAGCCTTGCCAA-1     2 0.000
#> CACAGCCTTGTAGC-1     1 0.000
#> CACAGTGATGAAGA-1     2 0.000
#> CACATACTACAGCT-1     1 0.253
#> CACATGGAACACGT-1     1 0.000
#> CACATGGAAGTCGT-1     1 0.000
#> CACCACTGCCAACA-1     1 0.000
#> CACCACTGGCGAAG-1     1 0.249
#> CACCCATGTTCTGT-1     1 0.249
#> CACCGGGAATCGAC-1     1 0.000
#> CACCGGGACGAGAG-1     1 0.000
#> CACCGGGACGTGTA-1     1 0.000
#> CACCGGGACTTCTA-1     2 0.751
#> CACCGGGACTTGCC-1     1 0.000
#> CACCGGGATTCGGA-1     1 0.249
#> CACCGTACTAAGGA-1     1 0.000
#> CACCGTACTAGCGT-1     1 0.000
#> CACCTGACACCCAA-1     1 0.000
#> CACCTGACCAGAAA-1     1 0.000
#> CACCTGACCTCAAG-1     1 0.751
#> CACCTGACGAAAGT-1     1 0.000
#> CACCTGACTCGTAG-1     1 0.000
#> CACGAAACTTCCGC-1     1 0.000
#> CACGACCTCGATAC-1     1 0.000
#> CACGCTACAGAAGT-1     1 1.000
#> CACGCTACTGTTCT-1     1 0.000
#> CACGGGACAGAGTA-1     1 0.000
#> CACGGGACATAAGG-1     1 0.000
#> CACGGGACGTAGGG-1     1 0.000
#> CACGGGTGCTTCGC-1     1 0.498
#> CACGGGTGGAGGAC-1     1 0.747
#> CACGGGTGTGTTTC-1     1 0.000
#> CACTAACTCCTAAG-1     1 0.000
#> CACTAACTGAAAGT-1     1 0.000
#> CACTAGGATGATGC-1     1 0.000
#> CACTATACCCCGTT-1     1 0.000
#> CACTATACGTTTGG-1     1 0.000
#> CACTGAGACAGTCA-1     2 0.000
#> CACTGCACTTCATC-1     1 0.000
#> CACTGCTGAGACTC-1     2 0.000
#> CACTGCTGGAAAGT-1     1 0.000
#> CACTTAACCGAATC-1     1 0.000
#> CACTTAACCGTACA-1     1 0.000
#> CACTTTGACTCTAT-1     1 0.000
#> CACTTTGAGCTGTA-1     1 0.000
#> CAGAAGCTCTCAAG-1     1 0.000
#> CAGACATGAACGGG-1     1 0.000
#> CAGACATGTCGACA-1     1 0.000
#> CAGACCCTAAGGTA-1     2 0.000
#> CAGACCCTAATGCC-1     1 0.000
#> CAGACCCTAGGAGC-1     1 0.000
#> CAGACTGAGTATGC-1     1 0.000
#> CAGATCGAATGTCG-1     1 0.000
#> CAGATCGACCTGAA-1     1 0.000
#> CAGATCGATATGGC-1     1 0.000
#> CAGATGACATTCTC-1     2 1.000
#> CAGCAATGCCTTCG-1     1 0.000
#> CAGCAATGGAGGGT-1     1 1.000
#> CAGCAATGGTGCTA-1     1 0.000
#> CAGCAATGTCTACT-1     2 0.000
#> CAGCAATGTGACCA-1     1 0.000
#> CAGCAATGTGAGGG-1     2 0.000
#> CAGCACCTAAGCCT-1     1 0.000
#> CAGCACCTAGGCGA-1     1 0.000
#> CAGCACCTGTAGGG-1     2 0.000
#> CAGCATGACAACCA-1     2 0.000
#> CAGCATGAGACGTT-1     1 0.000
#> CAGCCTACCCAACA-1     1 0.000
#> CAGCCTTGCTACCC-1     2 0.000
#> CAGCCTTGGGGACA-1     1 0.000
#> CAGCGGACACCCTC-1     1 0.000
#> CAGCGGACCTTTAC-1     1 1.000
#> CAGCGTCTAAAGCA-1     1 0.000
#> CAGCGTCTTATCGG-1     1 0.000
#> CAGCTAGATGTGAC-1     2 0.000
#> CAGCTCTGAGGCGA-1     1 0.000
#> CAGCTCTGCAAGCT-1     1 0.249
#> CAGCTCTGTCGTAG-1     2 0.000
#> CAGCTCTGTGTGGT-1     2 0.000
#> CAGGAACTAACTGC-1     1 0.000
#> CAGGAACTCTCAGA-1     2 0.000
#> CAGGCCGAACACCA-1     1 0.000
#> CAGGCCGAACACGT-1     1 0.000
#> CAGGCCGAACGACT-1     1 0.000
#> CAGGCCGAATCTCT-1     2 0.000
#> CAGGCCGACTAGCA-1     1 0.000
#> CAGGGCACCATACG-1     1 0.000
#> CAGGGCACCCAACA-1     1 0.000
#> CAGGGCACTCCCGT-1     1 0.000
#> CAGGTAACAGACTC-1     2 0.000
#> CAGGTATGAGTCGT-1     1 0.000
#> CAGGTATGTGCTTT-1     1 0.000
#> CAGGTTGAGGATCT-1     1 0.000
#> CAGTGATGGACGGA-1     1 0.000
#> CAGTGATGGCTAAC-1     1 1.000
#> CAGTGATGGGACAG-1     1 0.000
#> CAGTGATGTAAGGA-1     1 0.000
#> CAGTGATGTACGCA-1     1 0.000
#> CAGTGTGATGTCAG-1     1 0.000
#> CAGTTACTAAGGTA-1     1 0.000
#> CAGTTACTGATAGA-1     1 0.000
#> CAGTTGGAAAGAGT-1     2 0.000
#> CAGTTGGACATACG-1     1 0.000
#> CAGTTTACACACGT-1     1 1.000
#> CAGTTTACCCCAAA-1     1 0.000
#> CATAAAACGGAGCA-1     2 0.000
#> CATAAATGAACTGC-1     1 0.000
#> CATAACCTTCTCCG-1     1 0.000
#> CATACTACCTCGAA-1     1 0.000
#> CATACTACCTGAAC-1     1 0.000
#> CATACTACGTACCA-1     2 0.000
#> CATACTTGGGTTAC-1     2 0.000
#> CATAGTCTAATCGC-1     1 0.000
#> CATAGTCTCACTTT-1     1 0.000
#> CATATAGACTAAGC-1     2 0.000
#> CATATAGATCAGGT-1     1 0.000
#> CATCAACTAGAAGT-1     1 0.000
#> CATCAACTCCCTCA-1     1 0.000
#> CATCAGGACTTCCG-1     2 1.000
#> CATCAGGATAGCCA-1     2 1.000
#> CATCAGGATCCTAT-1     2 0.000
#> CATCAGGATGCACA-1     2 0.000
#> CATCAGGATTTCGT-1     2 0.000
#> CATCATACCGCATA-1     2 0.000
#> CATCATACGGAGCA-1     1 0.000
#> CATCATACTCAAGC-1     1 0.000
#> CATCGCTGGGATCT-1     1 0.000
#> CATCGCTGTGGCAT-1     1 0.000
#> CATCGGCTATGCTG-1     1 0.000
#> CATCGGCTTTGGCA-1     1 0.000
#> CATCTCCTATGTGC-1     1 0.000
#> CATCTCCTCGAACT-1     2 0.000
#> CATGAGACACGGGA-1     1 0.000
#> CATGAGACGTTGAC-1     2 1.000
#> CATGAGACTCGCCT-1     1 0.000
#> CATGCCACGGGTGA-1     1 0.000
#> CATGCCACTGCCAA-1     1 0.000
#> CATGCGCTAGTCAC-1     2 0.000
#> CATGCGCTCAGATC-1     2 0.000
#> CATGCGCTTTGCAG-1     2 0.000
#> CATGGCCTAGGGTG-1     2 0.000
#> CATGGCCTGTGCAT-1     1 0.000
#> CATGTACTATCGTG-1     1 0.498
#> CATGTTACAGTCGT-1     1 0.000
#> CATGTTACCTGAGT-1     1 0.000
#> CATGTTTGGGGATG-1     2 0.000
#> CATTACACACGGAG-1     1 0.000
#> CATTACACCAACTG-1     2 0.000
#> CATTACACGGAGTG-1     1 0.000
#> CATTACACTACTCT-1     1 0.000
#> CATTAGCTCCACAA-1     2 0.000
#> CATTGACTAGCGGA-1     2 0.000
#> CATTGGGACTCGAA-1     1 0.000
#> CATTGTACAGCGTT-1     1 0.000
#> CATTGTACTCGATG-1     1 0.000
#> CATTGTACTTATCC-1     1 0.000
#> CATTGTACTTTGCT-1     2 0.000
#> CATTGTTGCTAGTG-1     1 0.000
#> CATTTCGACTCTAT-1     1 0.253
#> CATTTCGAGATACC-1     2 0.000
#> CATTTGACCACACA-1     1 0.751
#> CATTTGACCCTGAA-1     1 0.000
#> CATTTGTGACGACT-1     1 0.000
#> CATTTGTGCATTGG-1     1 0.000
#> CATTTGTGCGGAGA-1     1 0.000
#> CATTTGTGGGATCT-1     1 0.000
#> CCAAAGTGCTACGA-1     2 0.000
#> CCAAAGTGTGAGAA-1     2 0.000
#> CCAACCTGAAGTAG-1     1 0.249
#> CCAACCTGACGTAC-1     2 0.000
#> CCAACCTGTTCGCC-1     2 0.253
#> CCAAGAACCCAATG-1     1 0.000
#> CCAAGAACGTAGCT-1     1 0.000
#> CCAAGAACGTGTCA-1     1 0.000
#> CCAAGAACTACTGG-1     1 0.249
#> CCAAGAACTCCTAT-1     1 0.000
#> CCAAGATGTCATTC-1     1 0.000
#> CCAAGATGTTTCAC-1     1 0.000
#> CCAAGTGAGGAACG-1     1 0.000
#> CCAAGTGATCAAGC-1     1 0.000
#> CCAATTTGAACGTC-1     2 0.000
#> CCACCATGAACGTC-1     1 0.000
#> CCACCATGATCGGT-1     1 0.000
#> CCACCATGGACGAG-1     2 0.000
#> CCACCATGGGGAGT-1     1 0.000
#> CCACCATGTCCTGC-1     1 1.000
#> CCACTGACCCGCTT-1     2 0.000
#> CCACTGTGGGAAGC-1     2 0.000
#> CCACTGTGTGTAGC-1     1 0.000
#> CCACTTCTCGGGAA-1     2 0.000
#> CCAGAAACCCTGTC-1     1 0.000
#> CCAGAAACGAACTC-1     1 0.000
#> CCAGAAACGGTCTA-1     1 0.000
#> CCAGACCTCTGAGT-1     1 1.000
#> CCAGACCTTGTGGT-1     1 0.000
#> CCAGCACTGCGATT-1     2 0.000
#> CCAGCGGAAAGGCG-1     2 0.000
#> CCAGCGGACGACTA-1     2 0.000
#> CCAGCGGATGGGAG-1     1 0.000
#> CCAGCTACACAGTC-1     1 0.000
#> CCAGCTACCAGCTA-1     1 0.000
#> CCAGGTCTACACCA-1     1 0.000
#> CCAGGTCTAGCATC-1     2 0.000
#> CCAGGTCTATGGTC-1     1 0.000
#> CCAGTCACACTGGT-1     2 0.000
#> CCAGTCACACTGTG-1     1 0.000
#> CCAGTCACGTTGTG-1     1 0.000
#> CCAGTGCTAACCAC-1     1 0.000
#> CCAGTGCTCGTAGT-1     1 0.000
#> CCATCCGAAAGCAA-1     1 0.000
#> CCATCCGAACGACT-1     1 0.000
#> CCATCCGAAGGTTC-1     1 0.000
#> CCATCCGATTCGCC-1     2 0.000
#> CCATCGTGAACGGG-1     1 0.000
#> CCATCGTGCTAGAC-1     2 0.000
#> CCCAACACCTCGCT-1     1 0.000
#> CCCAACACGCATCA-1     1 0.000
#> CCCAACACTTTGTC-1     2 0.000
#> CCCAACTGCAATCG-1     2 0.000
#> CCCAGACTGCCTTC-1     2 0.000
#> CCCAGACTGGTTTG-1     1 0.000
#> CCCAGACTTTCGCC-1     2 0.000
#> CCCAGTTGCAGTTG-1     2 0.000
#> CCCAGTTGGGTACT-1     1 0.000
#> CCCAGTTGTCTATC-1     1 0.000
#> CCCGATTGTGTTTC-1     1 0.000
#> CCCGGAGAAGGGTG-1     2 0.000
#> CCCTACGAATTGGC-1     2 0.000
#> CCCTAGTGCAAAGA-1     1 0.000
#> CCCTCAGACACTTT-1     1 0.000
#> CCCTCAGACGAGAG-1     1 0.000
#> CCCTCAGAGGTCAT-1     1 0.000
#> CCCTGAACTAAAGG-1     1 0.000
#> CCCTGATGCAACCA-1     1 0.000
#> CCCTGATGCAAGCT-1     1 0.000
#> CCCTTACTAACCAC-1     2 0.000
#> CCCTTACTGCAGTT-1     1 0.000
#> CCGAAAACCTTGTT-1     2 0.000
#> CCGACACTGGTTTG-1     1 0.000
#> CCGACTACCCAGTA-1     2 0.000
#> CCGACTACCGTGTA-1     1 0.000
#> CCGACTACTGAGGG-1     1 0.000
#> CCGATAGACCTAAG-1     1 0.000
#> CCGATAGAGTTGGT-1     2 0.000
#> CCGCGAGACACACA-1     2 0.000
#> CCGCGAGAGGTTCA-1     1 0.000
#> CCGCTATGGGACGA-1     1 0.000
#> CCGCTATGTGCAAC-1     2 0.000
#> CCGCTATGTGCACA-1     2 0.000
#> CCGGTACTGTCCTC-1     1 0.000
#> CCGTACACAAGCAA-1     1 0.000
#> CCGTACACAGCGTT-1     1 0.000
#> CCGTACACGTCATG-1     1 0.502
#> CCGTACACGTTGGT-1     2 0.000
#> CCGTACACTAACGC-1     1 0.000
#> CCTAAACTTTCGTT-1     1 0.000
#> CCTAAGGACCCAAA-1     1 0.000
#> CCTAAGGACTAGCA-1     2 0.000
#> CCTAAGGAGGGCAA-1     1 0.498
#> CCTAAGGATGATGC-1     1 0.000
#> CCTAAGGATGTCAG-1     1 0.000
#> CCTACCGACTCTTA-1     1 0.000
#> CCTACCGAGGGATG-1     1 0.000
#> CCTAGAGAGGTGAG-1     1 0.000
#> CCTATAACCAAAGA-1     1 0.000
#> CCTATAACGAGACG-1     2 0.000
#> CCTATAACTCAGAC-1     1 0.000
#> CCTATAACTGCATG-1     2 0.000
#> CCTCGAACACTTTC-1     2 1.000
#> CCTCGAACCCGTAA-1     2 0.000
#> CCTCGAACGTATCG-1     1 0.000
#> CCTCGAACTTACTC-1     1 0.000
#> CCTCTACTCTTCGC-1     2 0.000
#> CCTCTACTGGCATT-1     1 0.000
#> CCTGACTGAAGTAG-1     1 0.000
#> CCTGACTGGGGAGT-1     1 0.000
#> CCTGACTGTGTCTT-1     1 0.000
#> CCTGCAACACGTTG-1     2 0.000
#> CCTGGACTCGTGAT-1     1 0.000
#> CCTTAATGCCCAAA-1     1 0.000
#> CCTTAATGTTCTAC-1     2 0.000
#> CCTTCACTACGACT-1     1 0.000
#> CCTTCACTCAGTCA-1     1 0.000
#> CCTTCACTGGAGTG-1     2 0.000
#> CCTTTAGATTCATC-1     2 0.000
#> CGAACATGCCCTAC-1     2 0.000
#> CGAACATGTCAGAC-1     1 0.000
#> CGAAGACTGGAACG-1     1 0.000
#> CGAAGACTGTTACG-1     1 0.000
#> CGAAGGGAAACCTG-1     1 0.000
#> CGAAGGGATCCGAA-1     1 0.000
#> CGAAGTACCAACTG-1     1 0.000
#> CGAATCGAGGAGCA-1     2 0.751
#> CGAATCGAGGAGGT-1     1 0.000
#> CGACAAACCCATAG-1     1 0.000
#> CGACAAACCGACAT-1     1 0.000
#> CGACCACTAAAGTG-1     2 0.751
#> CGACCACTGCCAAT-1     2 0.751
#> CGACCGGAAGGTCT-1     1 0.000
#> CGACCGGATGGAAA-1     1 0.000
#> CGACCTTGCTAGTG-1     1 0.000
#> CGACGTCTATCGTG-1     1 0.000
#> CGACGTCTCGTGTA-1     1 0.000
#> CGACGTCTGAGGCA-1     1 0.000
#> CGACTCACGTCGTA-1     1 0.000
#> CGACTCACGTTGCA-1     1 0.000
#> CGACTCTGTGTGAC-1     1 0.000
#> CGACTGCTTCCTCG-1     2 0.000
#> CGAGAACTAAGGCG-1     1 0.000
#> CGAGAACTACGTTG-1     1 0.000
#> CGAGAACTTGTTCT-1     2 0.000
#> CGAGATTGGACACT-1     1 1.000
#> CGAGATTGGCCATA-1     1 1.000
#> CGAGCCGAACACCA-1     1 0.000
#> CGAGCCGAGGCGAA-1     1 0.000
#> CGAGCGTGCTCCAC-1     1 0.000
#> CGAGCGTGGATACC-1     1 0.000
#> CGAGCGTGTATGCG-1     2 0.000
#> CGAGGAGACCTCCA-1     1 0.000
#> CGAGGAGATGTCGA-1     1 0.000
#> CGAGGCACCTATGG-1     1 0.502
#> CGAGGCACTATGCG-1     2 0.000
#> CGAGGCACTCTTCA-1     1 0.000
#> CGAGGCTGACGCTA-1     2 1.000
#> CGAGGCTGGCAGTT-1     2 0.000
#> CGAGGGCTACGACT-1     1 0.000
#> CGAGGGCTCGAATC-1     1 0.000
#> CGAGTATGTCACCC-1     2 0.000
#> CGATACGAACAGTC-1     2 0.000
#> CGATACGACAGGAG-1     2 1.000
#> CGATACGATTCACT-1     1 0.000
#> CGATAGACCCGTAA-1     2 0.000
#> CGATAGACCGTACA-1     1 0.498
#> CGATAGACGTAGGG-1     2 0.000
#> CGATAGACTGTTCT-1     1 0.000
#> CGATCAGAAGAACA-1     1 0.000
#> CGATCAGAGAGGGT-1     1 0.000
#> CGATCAGAGGTACT-1     1 0.000
#> CGATCAGATGTGAC-1     2 0.000
#> CGATCCACCGGGAA-1     1 0.000
#> CGATCCACTTCCAT-1     1 0.000
#> CGCAAATGCTCGAA-1     1 0.000
#> CGCAACCTCCTTGC-1     1 0.000
#> CGCAACCTGGACGA-1     1 0.000
#> CGCACGGAGGACGA-1     1 0.000
#> CGCACGGATCTTTG-1     1 0.000
#> CGCACTACAGAATG-1     1 0.000
#> CGCACTACAGCCAT-1     1 0.000
#> CGCACTACATTGGC-1     1 0.000
#> CGCACTACTCGCCT-1     1 0.000
#> CGCACTACTCGTGA-1     1 0.000
#> CGCACTTGTCACGA-1     2 0.000
#> CGCAGGACAGATCC-1     1 0.000
#> CGCAGGACCTACTT-1     1 0.000
#> CGCAGGACTTGTCT-1     2 0.000
#> CGCAGGTGCACTGA-1     1 0.000
#> CGCAGGTGCCATAG-1     2 0.000
#> CGCAGGTGGGAACG-1     1 1.000
#> CGCATAGATCACGA-1     2 0.000
#> CGCCATACTGCAAC-1     1 0.000
#> CGCCATTGAGAGGC-1     1 0.000
#> CGCCATTGCTATGG-1     1 0.000
#> CGCCATTGGAGACG-1     1 0.000
#> CGCCATTGGAGCAG-1     1 0.000
#> CGCCATTGTACTGG-1     1 0.000
#> CGCCGAGAGCTTAG-1     2 1.000
#> CGCCTAACGAATGA-1     2 0.000
#> CGCCTAACTGCTCC-1     1 0.000
#> CGCGAGACACAGCT-1     1 0.000
#> CGCGAGACAGGTCT-1     1 0.000
#> CGCGAGACGCTACA-1     1 0.000
#> CGCGATCTCAGTCA-1     2 0.000
#> CGCGATCTGTTGAC-1     2 0.000
#> CGCGATCTTTCTTG-1     1 0.000
#> CGCGGATGGCCAAT-1     1 0.000
#> CGCTAAGAATGTCG-1     1 0.000
#> CGCTAAGACAACTG-1     1 0.000
#> CGCTAAGACCCTTG-1     1 0.000
#> CGCTACTGAACAGA-1     2 0.000
#> CGCTACTGAGAACA-1     1 0.000
#> CGCTACTGTGAGCT-1     1 0.000
#> CGCTACTGTTCCCG-1     1 0.502
#> CGCTCATGCATTTC-1     2 0.000
#> CGGAATTGGTTTGG-1     1 0.000
#> CGGAATTGTGGAGG-1     1 0.000
#> CGGACCGATGCGTA-1     1 0.000
#> CGGACCGATGGGAG-1     1 0.000
#> CGGACTCTAAACAG-1     1 0.000
#> CGGACTCTCCAATG-1     1 0.249
#> CGGACTCTCCTCGT-1     1 1.000
#> CGGAGGCTATTCCT-1     1 0.000
#> CGGAGGCTTGGATC-1     1 0.000
#> CGGATAACAACGAA-1     2 0.000
#> CGGATAACAGCTCA-1     1 0.000
#> CGGATAACTCAGTG-1     2 0.000
#> CGGCACGAACTCAG-1     1 0.000
#> CGGCACGAAGGGTG-1     1 0.000
#> CGGCACGACTACGA-1     2 0.000
#> CGGCATCTTAGAAG-1     1 0.000
#> CGGCATCTTCGTAG-1     2 0.000
#> CGGCCAGAAAGGTA-1     1 0.000
#> CGGCCAGAGAGGCA-1     1 0.249
#> CGGCGAACCAGTCA-1     2 0.000
#> CGGCGAACGACAAA-1     2 1.000
#> CGGCGAACGGTCTA-1     1 0.000
#> CGGCGAACTACTTC-1     2 1.000
#> CGGGACTGCGTGTA-1     1 0.000
#> CGGGACTGGAATAG-1     1 0.249
#> CGGGCATGACCCAA-1     1 1.000
#> CGGGCATGTCTCTA-1     1 0.000
#> CGGGCATGTTGTGG-1     1 0.000
#> CGGTAAACTCGCAA-1     1 0.000
#> CGGTCACTGTTTGG-1     1 0.000
#> CGGTCACTTACTTC-1     1 0.000
#> CGTAACGATCGCCT-1     1 0.000
#> CGTACCACACACAC-1     1 0.000
#> CGTACCACACGTTG-1     1 0.000
#> CGTACCACCTCATT-1     1 0.000
#> CGTACCACGGAGCA-1     1 0.000
#> CGTACCTGGCATCA-1     1 1.000
#> CGTAGCCTCTCTCG-1     2 0.000
#> CGTAGCCTGCGAAG-1     1 0.000
#> CGTAGCCTGTATGC-1     2 0.000
#> CGTCAAGAAAGGTA-1     2 0.000
#> CGTCAAGAACGTGT-1     1 0.000
#> CGTCAAGACAGAGG-1     1 0.000
#> CGTCAAGACAGGAG-1     1 0.751
#> CGTCCATGCTCTTA-1     1 0.000
#> CGTCGACTTTCCGC-1     1 0.000
#> CGTGATGACGCTAA-1     1 0.000
#> CGTGATGAGGTTCA-1     1 0.000
#> CGTGCACTTATGGC-1     2 0.000
#> CGTGTAGAAAAACG-1     1 0.000
#> CGTGTAGACGATAC-1     1 0.751
#> CGTGTAGAGTTACG-1     2 1.000
#> CGTGTAGAGTTCAG-1     2 0.000
#> CGTGTAGATTCGGA-1     2 0.751
#> CGTTAGGAAACCAC-1     1 0.000
#> CGTTAGGATCATTC-1     2 0.000
#> CGTTATACCCTGAA-1     1 1.000
#> CGTTTAACTGGTCA-1     1 0.000
#> CTAAACCTCTGACA-1     2 0.000
#> CTAAACCTGTGCAT-1     1 0.000
#> CTAACACTAACGTC-1     1 0.000
#> CTAACACTAGTGCT-1     2 0.000
#> CTAACGGAACCGAT-1     2 1.000
#> CTAACGGATTTCTG-1     1 0.000
#> CTAACTACGGCAAG-1     1 0.000
#> CTAAGGACACCATG-1     1 0.000
#> CTAAGGACCGTTAG-1     1 0.000
#> CTAAGGACGCCATA-1     2 0.000
#> CTAAGGTGCCTAAG-1     1 0.000
#> CTAAGGTGTTGCAG-1     1 0.000
#> CTAAGGTGTTTCTG-1     1 0.000
#> CTAATAGAGCTATG-1     1 0.000
#> CTAATGCTTGTGGT-1     2 0.000
#> CTACAACTCCCGTT-1     1 0.502
#> CTACCTCTCAACCA-1     1 0.000
#> CTACGCACACCTAG-1     2 0.000
#> CTACGCACTCTCCG-1     1 0.000
#> CTACGCACTGGTCA-1     1 1.000
#> CTACGGCTTTCTTG-1     2 0.000
#> CTACTATGAACCAC-1     2 0.000
#> CTACTATGATGTGC-1     2 0.000
#> CTACTATGCTAAGC-1     1 0.000
#> CTACTATGTAAAGG-1     1 0.000
#> CTACTCCTATGTCG-1     2 0.000
#> CTACTCCTGCCATA-1     2 0.000
#> CTAGAGACACTTTC-1     1 0.000
#> CTAGAGACAGCATC-1     1 0.000
#> CTAGAGACTTTGGG-1     2 0.000
#> CTAGATCTCTCTAT-1     1 0.000
#> CTAGATCTTCGACA-1     1 0.000
#> CTAGGATGAGCCTA-1     1 0.249
#> CTAGGATGATCGTG-1     1 0.000
#> CTAGGCCTCTCAGA-1     1 0.000
#> CTAGGTGATGGTTG-1     2 0.000
#> CTAGTTACCAGAGG-1     1 0.000
#> CTAGTTACCGCATA-1     1 0.000
#> CTAGTTACGAAACA-1     2 1.000
#> CTATAAGATCGTTT-1     1 0.000
#> CTATACTGAGGTTC-1     2 1.000
#> CTATACTGCCAGTA-1     1 0.000
#> CTATACTGCGCTAA-1     2 0.000
#> CTATACTGCTACGA-1     2 1.000
#> CTATACTGTCTCAT-1     2 1.000
#> CTATACTGTTCGTT-1     1 0.000
#> CTATAGCTGTCACA-1     1 0.000
#> CTATAGCTTCGCTC-1     2 0.000
#> CTATAGCTTGCCTC-1     2 0.000
#> CTATCAACGAACTC-1     1 0.000
#> CTATCAACGCAGAG-1     1 0.000
#> CTATCAACTTTGGG-1     1 0.000
#> CTATCCCTCCACCT-1     2 0.000
#> CTATGTACGAGAGC-1     1 0.000
#> CTATGTACGCTTAG-1     1 0.000
#> CTATGTACTGTTTC-1     1 0.000
#> CTATGTTGAAAGCA-1     1 0.000
#> CTATGTTGTCCTCG-1     1 0.000
#> CTATGTTGTCTCGC-1     1 0.000
#> CTATTGACAAACGA-1     2 0.000
#> CTATTGACACTGGT-1     2 0.000
#> CTATTGACGGTGAG-1     2 0.000
#> CTATTGTGGCAAGG-1     1 0.000
#> CTCAATTGGTTCAG-1     1 0.000
#> CTCAATTGGTTGCA-1     2 0.000
#> CTCAGAGATAGAAG-1     1 0.000
#> CTCAGCACTCTAGG-1     1 0.000
#> CTCAGCACTGAACC-1     2 0.000
#> CTCAGCACTTGCAG-1     1 0.000
#> CTCAGCTGAACCTG-1     2 0.000
#> CTCAGCTGCAGTTG-1     1 0.000
#> CTCAGGCTCGTTGA-1     2 0.000
#> CTCAGGCTGCTAAC-1     1 0.000
#> CTCATTGACCTTAT-1     1 0.000
#> CTCATTGATGCTTT-1     2 0.000
#> CTCCACGAGAGATA-1     2 0.000
#> CTCCATCTCTTAGG-1     1 0.000
#> CTCCATCTGACGAG-1     1 0.000
#> CTCCGAACAAGTGA-1     2 0.000
#> CTCCTACTGCCTTC-1     2 0.000
#> CTCGAAGATGTGGT-1     1 0.000
#> CTCGAAGATTAGGC-1     2 0.000
#> CTCGACTGCTCTAT-1     1 0.000
#> CTCGACTGGGTGAG-1     1 0.000
#> CTCGACTGGTTGAC-1     2 1.000
#> CTCGAGCTCTGGAT-1     1 1.000
#> CTCGCATGACTTTC-1     1 0.000
#> CTCGCATGCTTAGG-1     1 0.000
#> CTCTAAACCTCGAA-1     1 0.000
#> CTCTAAACGGCGAA-1     1 0.000
#> CTCTAATGTCCAAG-1     2 0.000
#> CTGAACGACAGTCA-1     1 0.000
#> CTGAACGATGAGGG-1     1 0.253
#> CTGAAGACCCAACA-1     1 0.000
#> CTGAAGACGTGCAT-1     1 0.000
#> CTGAAGTGAAGCCT-1     2 0.000
#> CTGAAGTGCAGCTA-1     1 0.000
#> CTGAAGTGGCTATG-1     1 0.000
#> CTGAAGTGTCCAGA-1     1 0.000
#> CTGAATCTGAATAG-1     1 0.249
#> CTGACAGAATCGTG-1     1 0.751
#> CTGACCACAGCAAA-1     1 0.000
#> CTGAGAACCGGGAA-1     1 0.000
#> CTGAGAACGTAAAG-1     2 1.000
#> CTGATACTAGTAGA-1     1 0.000
#> CTGATTTGGTGTTG-1     2 0.000
#> CTGCAGCTAACCGT-1     1 0.000
#> CTGCAGCTGACACT-1     1 0.000
#> CTGCAGCTGGATTC-1     2 0.000
#> CTGCAGCTTGGCAT-1     1 0.000
#> CTGCCAACAGGAGC-1     1 0.000
#> CTGCCAACCAGCTA-1     1 0.000
#> CTGCCAACTAACCG-1     2 0.000
#> CTGCCAACTGCTCC-1     1 0.000
#> CTGCCAACTTGCAG-1     1 0.000
#> CTGCCAACTTGCTT-1     1 0.000
#> CTGCGACTCCACCT-1     1 0.502
#> CTGGAAACAAACGA-1     1 0.502
#> CTGGAAACATCGAC-1     1 0.000
#> CTGGATGACTGGAT-1     1 0.000
#> CTGGATGACTTGTT-1     1 0.498
#> CTGGATGATGTGAC-1     1 0.000
#> CTGGCACTCAAGCT-1     2 0.000
#> CTGTAACTAACCAC-1     1 0.000
#> CTGTAACTAGCGTT-1     1 0.000
#> CTGTATACGTAAAG-1     1 0.000
#> CTGTATACGTACGT-1     2 0.000
#> CTGTATACGTTGGT-1     1 0.000
#> CTGTGAGACAACCA-1     2 0.000
#> CTGTGAGACCTTGC-1     1 0.000
#> CTGTGAGACGAACT-1     2 0.000
#> CTGTGAGACTGTAG-1     2 0.000
#> CTTAAAGAACCTGA-1     1 0.000
#> CTTAACACCTGTAG-1     1 0.000
#> CTTAACACTATCGG-1     1 0.000
#> CTTAAGCTACCTAG-1     1 0.000
#> CTTAAGCTAGTACC-1     1 0.000
#> CTTAAGCTCATCAG-1     1 0.000
#> CTTAAGCTCCGCTT-1     1 0.000
#> CTTACAACTAACGC-1     1 0.000
#> CTTACAACTCCCGT-1     2 0.000
#> CTTACTGACGTACA-1     1 0.000
#> CTTAGACTAAACGA-1     1 0.000
#> CTTAGGGACTTGCC-1     1 0.000
#> CTTAGGGAGAATCC-1     1 0.000
#> CTTATCGACTCATT-1     1 0.000
#> CTTCACCTACCTGA-1     2 0.000
#> CTTCATGAAGCATC-1     1 0.000
#> CTTCATGAAGTACC-1     1 0.000
#> CTTCATGACCGAAT-1     1 0.000
#> CTTGAACTACGCAT-1     1 0.000
#> CTTGATTGAGGTTC-1     1 1.000
#> CTTGATTGATCTTC-1     2 0.000
#> CTTGATTGCATTCT-1     1 0.000
#> CTTGATTGTTTCGT-1     1 0.000
#> CTTGTATGACACCA-1     1 0.000
#> CTTGTATGCGCAAT-1     1 0.000
#> CTTTACGAGCGAAG-1     1 0.000
#> CTTTAGACCGTGAT-1     1 0.000
#> CTTTAGACGAGACG-1     1 0.000
#> CTTTAGACGATACC-1     1 0.000
#> CTTTAGACGTTGGT-1     1 0.000
#> CTTTAGACTCATTC-1     1 0.000
#> CTTTAGTGACGGGA-1     2 1.000
#> CTTTAGTGGGTGGA-1     1 0.000
#> CTTTCAGAGAAACA-1     1 0.000
#> CTTTGATGAGCACT-1     1 0.000
#> CTTTGATGTCTAGG-1     1 0.000
#> CTTTGATGTGTCCC-1     1 0.000
#> CTTTGATGTGTGGT-1     1 0.000
#> GAAACAGAACTACG-1     1 0.000
#> GAAACAGAATCACG-1     1 0.000
#> GAAACAGACATTCT-1     1 0.000
#> GAAACCTGATCGTG-1     1 0.000
#> GAAACCTGATGCCA-1     1 0.000
#> GAAACCTGCTTATC-1     1 0.000
#> GAAACCTGGACTAC-1     2 0.000
#> GAAACCTGTGCTAG-1     1 0.000
#> GAAAGATGATTTCC-1     1 0.000
#> GAAAGATGCTGATG-1     2 0.000
#> GAAAGATGCTTCGC-1     2 0.000
#> GAAAGATGTAAGGA-1     1 0.249
#> GAAAGCCTACGTTG-1     1 0.000
#> GAAAGTGAAAGTGA-1     2 0.000
#> GAAAGTGACCACAA-1     2 0.000
#> GAAAGTGACTCAAG-1     1 0.000
#> GAAATACTACCAAC-1     2 1.000
#> GAAATACTCTTAGG-1     1 0.000
#> GAAATACTTCCTCG-1     1 1.000
#> GAACACACGTGCAT-1     2 0.000
#> GAACACACTGCCTC-1     1 0.000
#> GAACAGCTAACTGC-1     2 0.000
#> GAACAGCTCTCAGA-1     2 0.000
#> GAACCAACCACAAC-1     1 0.000
#> GAACCAACTTCCGC-1     2 1.000
#> GAACCTGAACGTGT-1     1 0.000
#> GAACCTGAGAGACG-1     1 0.000
#> GAACCTGATGAACC-1     1 0.000
#> GAACGGGATACTTC-1     1 0.000
#> GAACTGTGACCTGA-1     2 0.000
#> GAACTGTGCCAGTA-1     2 0.000
#> GAAGAATGCAATCG-1     1 0.000
#> GAAGCGGACCTATT-1     2 0.000
#> GAAGCTACGAATGA-1     2 0.000
#> GAAGCTACGGTTTG-1     1 1.000
#> GAAGGGTGAAAGTG-1     1 0.000
#> GAAGGGTGCTTAGG-1     2 0.000
#> GAAGGTCTGAAAGT-1     1 1.000
#> GAAGGTCTGTTGCA-1     1 0.000
#> GAAGGTCTTAAAGG-1     2 0.000
#> GAAGTAGACTCCCA-1     1 0.502
#> GAAGTAGATCCAAG-1     2 0.000
#> GAAGTCACCCTCGT-1     2 0.000
#> GAAGTCACCCTGTC-1     1 0.000
#> GAAGTCTGTCGCAA-1     1 0.000
#> GAAGTCTGTTCTGT-1     1 0.000
#> GAAGTGCTAAACGA-1     2 1.000
#> GAAGTGCTCCGCTT-1     2 0.000
#> GAAGTGCTTAACCG-1     1 0.000
#> GAATGCACCCTAAG-1     1 0.000
#> GAATGCACCTTCGC-1     2 1.000
#> GAATGCTGCGGTAT-1     1 0.000
#> GAATTAACGATAAG-1     1 0.000
#> GAATTAACGGTCAT-1     1 0.000
#> GAATTAACGTCGTA-1     2 1.000
#> GAATTAACTGAAGA-1     1 0.000
#> GACAACACAGGCGA-1     1 0.000
#> GACAACACATCGTG-1     1 0.000
#> GACAACACTCGCCT-1     1 0.000
#> GACAACTGAGGTTC-1     1 0.000
#> GACAGGGAAGAGTA-1     1 0.000
#> GACAGGGAATGCCA-1     1 0.000
#> GACAGTACGAGCTT-1     2 0.000
#> GACAGTACTTCGGA-1     2 0.000
#> GACAGTTGAGTAGA-1     1 0.000
#> GACATTCTCCACCT-1     2 0.000
#> GACCAAACGACTAC-1     2 0.000
#> GACCAAACGTATCG-1     2 0.000
#> GACCCTACTAAAGG-1     1 0.000
#> GACCTAGACCTCAC-1     1 0.000
#> GACCTAGACGAGAG-1     1 0.000
#> GACCTCACAAGGTA-1     1 0.000
#> GACCTCACGTACGT-1     2 0.000
#> GACCTCTGCATCAG-1     1 0.000
#> GACGAACTCCCACT-1     1 0.000
#> GACGATTGCCAATG-1     1 0.000
#> GACGCCGACCTTCG-1     1 0.000
#> GACGCTCTCTCTCG-1     2 1.000
#> GACGGCACACGGGA-1     2 0.000
#> GACGGCACGAGATA-1     2 0.000
#> GACGTAACCTATGG-1     1 0.000
#> GACGTAACCTGTGA-1     1 0.000
#> GACGTAACTATGGC-1     1 0.000
#> GACGTATGTTGACG-1     1 0.000
#> GACGTATGTTTGCT-1     1 0.000
#> GACGTCCTACGGAG-1     1 0.000
#> GACGTCCTCTCAAG-1     2 0.000
#> GACGTCCTGATAAG-1     1 0.000
#> GACTACGATGGTCA-1     1 0.000
#> GACTCCTGCTCGCT-1     1 0.000
#> GACTCCTGGGTTAC-1     1 0.000
#> GACTCCTGTTATCC-1     1 0.000
#> GACTCCTGTTGGTG-1     2 0.000
#> GACTGAACCAATCG-1     2 0.000
#> GACTGATGTGATGC-1     1 0.000
#> GACTTTACATGCCA-1     1 0.000
#> GACTTTACGACAGG-1     1 0.000
#> GAGAAATGTTCTCA-1     1 0.000
#> GAGATAGAAAAAGC-1     2 0.000
#> GAGATCACGACAAA-1     2 0.000
#> GAGATGCTCTGGAT-1     1 0.000
#> GAGATGCTGAATGA-1     1 0.249
#> GAGCAGGATTCCCG-1     1 0.000
#> GAGCATACTTTGCT-1     2 0.000
#> GAGCGCACGCGTAT-1     2 0.000
#> GAGCGCACGGTGAG-1     1 0.000
#> GAGCGCTGAAGATG-1     1 1.000
#> GAGCGCTGTCTTAC-1     2 0.000
#> GAGCGGCTGGGAGT-1     1 0.000
#> GAGGACGACTCAGA-1     1 0.000
#> GAGGATCTGAAAGT-1     1 0.000
#> GAGGCAGACTTGCC-1     1 1.000
#> GAGGGAACACCAGT-1     1 0.000
#> GAGGGAACGAGGGT-1     1 0.249
#> GAGGGATGGGAAAT-1     1 0.000
#> GAGGGCCTTCACCC-1     1 0.000
#> GAGGGTGAAGAGTA-1     1 0.000
#> GAGGTACTACGGTT-1     1 0.000
#> GAGGTACTACTCAG-1     2 0.000
#> GAGGTACTGACACT-1     1 1.000
#> GAGGTACTGGGAGT-1     1 0.000
#> GAGGTACTTAGCGT-1     2 0.000
#> GAGGTGGAGTACGT-1     1 0.000
#> GAGGTGGATCCTCG-1     2 0.253
#> GAGGTTACTCGTTT-1     2 0.000
#> GAGGTTTGTAAGCC-1     2 0.000
#> GAGTCAACCATTCT-1     1 0.000
#> GAGTCAACGGGAGT-1     1 0.000
#> GAGTCTGATCGTGA-1     1 0.000
#> GAGTCTGATTTGGG-1     1 0.000
#> GAGTGACTCAGCTA-1     1 0.751
#> GAGTGACTCGGTAT-1     1 0.000
#> GAGTGACTCTTGCC-1     1 0.000
#> GAGTGACTGACTAC-1     1 0.000
#> GAGTGACTGTCTAG-1     1 0.000
#> GAGTGGGAGTCTTT-1     1 0.000
#> GAGTGGGATGCCCT-1     1 0.000
#> GAGTGGGATGCTGA-1     1 0.000
#> GAGTGTTGCTGTAG-1     1 0.000
#> GAGTGTTGTGGTCA-1     1 0.000
#> GAGTTGTGCATGGT-1     2 0.502
#> GAGTTGTGCTGAGT-1     1 0.498
#> GAGTTGTGGCGAGA-1     2 0.000
#> GAGTTGTGGTAGCT-1     2 0.000
#> GAGTTGTGTATGCG-1     2 0.000
#> GATAAGGAGAAACA-1     2 0.000
#> GATAAGGATTCACT-1     2 0.000
#> GATACTCTATCGGT-1     1 0.000
#> GATACTCTTACTTC-1     1 0.000
#> GATACTCTTGACTG-1     2 0.000
#> GATAGAGAAGGGTG-1     1 0.249
#> GATAGAGACTGTGA-1     1 0.000
#> GATAGAGATCACGA-1     2 0.000
#> GATAGCACCCATAG-1     1 0.000
#> GATAGCACGAAGGC-1     2 0.000
#> GATAGCACTTGTCT-1     1 0.000
#> GATATAACAAGGTA-1     1 0.000
#> GATATAACACGCAT-1     1 0.000
#> GATATATGCTGGAT-1     1 0.000
#> GATATATGTCCGTC-1     1 0.000
#> GATATATGTGGAGG-1     2 0.000
#> GATATCCTAGAAGT-1     1 0.000
#> GATATCCTCCCGTT-1     2 0.000
#> GATATTGACAGGAG-1     1 0.000
#> GATATTGACGAGTT-1     2 0.000
#> GATATTGAGCCAAT-1     1 0.000
#> GATCCCTGACCTTT-1     2 1.000
#> GATCCCTGTGTAGC-1     1 0.000
#> GATCCGCTGGTCAT-1     2 0.000
#> GATCGAACCGAGAG-1     1 0.000
#> GATCGATGACTAGC-1     1 0.000
#> GATCGATGGTAAAG-1     1 0.000
#> GATCGATGTAAGGA-1     2 0.000
#> GATCGTGACACTAG-1     1 0.000
#> GATCGTGATTCACT-1     1 0.000
#> GATCTACTGGTGAG-1     1 0.000
#> GATCTACTTTGCAG-1     1 0.000
#> GATCTTACACCCAA-1     2 0.000
#> GATCTTACCCTACC-1     1 0.000
#> GATCTTACGAATAG-1     2 0.000
#> GATCTTACGAGATA-1     2 0.000
#> GATGCAACTCCAGA-1     1 0.000
#> GATGCCCTACGTAC-1     1 0.000
#> GATGCCCTCTCATT-1     1 0.000
#> GATGCCCTGGCAAG-1     2 0.000
#> GATGCCCTTTTGCT-1     1 0.000
#> GATTACCTTGTTCT-1     1 0.000
#> GATTCGGAACGACT-1     1 0.000
#> GATTCGGACAGGAG-1     2 0.000
#> GATTCGGAGAAGGC-1     2 0.000
#> GATTCTTGATTCGG-1     2 0.000
#> GATTCTTGCCGATA-1     1 0.000
#> GATTCTTGCGAGTT-1     1 0.000
#> GATTGGACCCGTTC-1     1 0.000
#> GATTGGACGGTGTT-1     1 0.000
#> GATTGGACTTTCGT-1     1 0.000
#> GATTGGTGTGTCAG-1     1 0.000
#> GATTTAGACACTCC-1     2 0.000
#> GATTTAGACTAAGC-1     1 1.000
#> GATTTAGATTCGTT-1     2 1.000
#> GATTTGCTAACGAA-1     1 0.000
#> GATTTGCTAACGGG-1     2 0.502
#> GCAACCCTCCTCGT-1     2 0.000
#> GCAACTGATTGCGA-1     1 0.000
#> GCAAGACTACTGGT-1     1 0.000
#> GCAAGACTAGGTCT-1     1 0.000
#> GCAAGACTCCCTTG-1     1 0.000
#> GCAATCGACTGCAA-1     1 0.000
#> GCAATCGAGACGTT-1     2 0.000
#> GCAATCGATCCTTA-1     2 0.000
#> GCAATTCTCGTGTA-1     1 0.000
#> GCAATTCTTCTCCG-1     1 0.000
#> GCACAAACAATGCC-1     1 0.000
#> GCACAAACGGTACT-1     1 0.000
#> GCACAATGGTGCAT-1     2 0.000
#> GCACACCTGTGCTA-1     2 1.000
#> GCACCACTCATGAC-1     2 0.000
#> GCACCACTGTTTGG-1     2 0.253
#> GCACCACTTCCTTA-1     2 1.000
#> GCACCACTTTCGGA-1     2 0.000
#> GCACCTACGCGATT-1     1 0.000
#> GCACCTTGGCTGTA-1     1 0.000
#> GCACCTTGGGGAGT-1     2 0.000
#> GCACGGACCAGCTA-1     1 0.000
#> GCACGGTGACCTCC-1     1 0.000
#> GCACGGTGCTATGG-1     2 0.000
#> GCACTAGAACGGGA-1     1 0.000
#> GCACTAGAAGATGA-1     1 0.000
#> GCACTAGACCTTTA-1     2 0.000
#> GCACTAGACGTAAC-1     1 0.000
#> GCACTAGAGTCGTA-1     1 0.751
#> GCACTAGATGCAAC-1     1 0.000
#> GCACTGCTGAGGCA-1     1 0.000
#> GCAGATACAGCGTT-1     1 0.000
#> GCAGATACGACGGA-1     1 0.000
#> GCAGATACGCAGAG-1     1 0.000
#> GCAGCCGACAGTCA-1     1 0.000
#> GCAGCGTGCACTCC-1     1 0.000
#> GCAGCTCTCAATCG-1     1 0.000
#> GCAGCTCTGTTTCT-1     1 0.000
#> GCAGGGCTAAGAAC-1     1 0.000
#> GCAGGGCTAAGGGC-1     1 0.000
#> GCAGGGCTATCGAC-1     2 0.747
#> GCAGGGCTTGGGAG-1     1 0.000
#> GCAGTCCTAACTGC-1     1 0.000
#> GCAGTCCTCTCTTA-1     1 0.000
#> GCATCAGATGCGTA-1     1 0.000
#> GCATGTGACAAGCT-1     1 0.000
#> GCATTGGAGAAGGC-1     1 0.000
#> GCCAAAACGAGGCA-1     1 0.000
#> GCCAAATGATCGAC-1     1 0.000
#> GCCAACCTACGGTT-1     1 0.000
#> GCCAACCTCGCCTT-1     1 0.000
#> GCCACGGAGGCGAA-1     2 0.000
#> GCCACGGATACTGG-1     1 0.000
#> GCCACTACGTCTTT-1     1 0.000
#> GCCCAACTACCGAT-1     1 0.000
#> GCCCAACTATGGTC-1     1 0.000
#> GCCCATACAGCGTT-1     1 0.249
#> GCCGACGAACTCTT-1     2 0.000
#> GCCGAGTGCGTTGA-1     1 0.000
#> GCCGGAACGAACTC-1     1 0.000
#> GCCGGAACGTTCTT-1     2 1.000
#> GCCGGAACTGCACA-1     2 1.000
#> GCCGGAACTTACTC-1     1 0.000
#> GCCGTACTACCTGA-1     1 0.000
#> GCCGTACTGGCAAG-1     2 0.000
#> GCCTACACAGTTCG-1     2 0.751
#> GCCTACACCACTGA-1     2 0.000
#> GCCTACACCTTGAG-1     1 0.000
#> GCCTAGCTACGGAG-1     1 0.000
#> GCCTAGCTCTATTC-1     1 0.000
#> GCCTAGCTTCTCAT-1     1 0.000
#> GCCTAGCTTCTCTA-1     2 0.000
#> GCCTCAACCATGGT-1     1 0.000
#> GCCTCAACTCTTTG-1     1 1.000
#> GCCTCATGTCTTAC-1     1 0.000
#> GCCTGACTCTCAAG-1     2 0.000
#> GCGAAGGAACTCTT-1     1 0.000
#> GCGAAGGATGCCAA-1     1 0.000
#> GCGAGAGAGGGACA-1     1 0.000
#> GCGAGCACTGTCGA-1     1 0.498
#> GCGAGCACTTGACG-1     1 0.000
#> GCGAGCACTTGCTT-1     2 0.000
#> GCGATATGGTACGT-1     1 0.000
#> GCGATATGGTGTTG-1     1 0.000
#> GCGCACGAAGTCGT-1     1 0.000
#> GCGCACGACTTTAC-1     2 0.000
#> GCGCATCTAGGTCT-1     1 0.000
#> GCGCATCTGGTTAC-1     1 1.000
#> GCGCATCTTCGATG-1     1 0.000
#> GCGCATCTTGCTCC-1     1 1.000
#> GCGCATCTTTCTAC-1     1 0.000
#> GCGCGAACGTTCTT-1     1 0.000
#> GCGCGATGAACGGG-1     1 0.000
#> GCGCGATGGTGCAT-1     2 1.000
#> GCGGAGCTCCTGAA-1     1 0.000
#> GCGGCAACCCGATA-1     1 0.000
#> GCGGCAACGGAGGT-1     1 0.000
#> GCGGCAACTGTCGA-1     2 1.000
#> GCGTAAACACGGTT-1     2 0.000
#> GCGTAATGCACCAA-1     2 0.000
#> GCGTATGAACACCA-1     1 0.000
#> GCGTATGATGAGAA-1     2 0.000
#> GCTACAGAAAGGTA-1     1 0.000
#> GCTACAGAATCTTC-1     1 0.000
#> GCTACCTGAGAAGT-1     2 0.000
#> GCTACCTGATCACG-1     1 0.000
#> GCTACGCTAGAATG-1     1 0.000
#> GCTACGCTAGCTAC-1     1 0.000
#> GCTACGCTCCCTAC-1     1 0.000
#> GCTAGAACAGAGGC-1     1 0.000
#> GCTAGAACGGATCT-1     1 0.000
#> GCTAGAACTCCCGT-1     1 0.000
#> GCTAGATGAGCTCA-1     2 0.000
#> GCTAGATGGCGATT-1     1 0.000
#> GCTATACTAAGGCG-1     1 0.000
#> GCTATACTAGCGTT-1     1 1.000
#> GCTATACTCTCTTA-1     1 0.000
#> GCTATACTGGACGA-1     1 0.000
#> GCTCAAGAACCATG-1     2 0.000
#> GCTCAAGAAGTCAC-1     2 0.000
#> GCTCAGCTGTCTAG-1     1 0.000
#> GCTCCATGAGAAGT-1     1 1.000
#> GCTCCATGCCGAAT-1     1 0.000
#> GCTCGACTCTAGTG-1     2 0.000
#> GCTGATGAGGTATC-1     2 0.000
#> GCTTAACTACAGTC-1     2 0.000
#> GCTTAACTACTGGT-1     1 0.249
#> GCTTAACTGCTGAT-1     1 0.000
#> GCTTAACTTAGACC-1     2 0.000
#> GCTTAACTTCAGTG-1     1 0.000
#> GGAACACTCACTTT-1     2 0.253
#> GGAACACTTCAGAC-1     2 1.000
#> GGAACTACTACTTC-1     1 0.000
#> GGAACTTGAAGGTA-1     2 0.000
#> GGAACTTGAGAATG-1     1 0.000
#> GGAACTTGCTCCAC-1     2 0.000
#> GGAACTTGGGTAGG-1     1 0.000
#> GGAAGGACATCGGT-1     2 0.000
#> GGAAGGACCACTAG-1     1 0.000
#> GGAAGGACGAGGGT-1     1 0.000
#> GGAAGGACGCGAAG-1     1 0.000
#> GGAAGGTGGCGAGA-1     2 0.253
#> GGAATCTGAAGGGC-1     1 0.000
#> GGAATCTGAGGAGC-1     1 0.000
#> GGAATCTGCTTAGG-1     1 0.000
#> GGAATCTGCTTGTT-1     2 0.000
#> GGAATCTGGGAGGT-1     1 0.000
#> GGAATGCTTTCTAC-1     1 0.000
#> GGACAGGAAAGGGC-1     1 0.000
#> GGACAGGAGTGCTA-1     1 0.000
#> GGACAGGATCTCGC-1     1 0.000
#> GGACCCGAAGCTAC-1     2 0.000
#> GGACCGTGCTTACT-1     2 0.000
#> GGACCGTGGGAACG-1     2 0.000
#> GGACCGTGTAACGC-1     1 0.000
#> GGACCTCTGTAAGA-1     2 0.000
#> GGACCTCTTTTCTG-1     1 0.000
#> GGACGAGAGTGTCA-1     2 0.000
#> GGACGCTGACGCAT-1     1 0.000
#> GGACGCTGCTAGCA-1     1 0.000
#> GGACGCTGTCCTCG-1     2 1.000
#> GGAGAGACGTGAGG-1     1 0.000
#> GGAGCAGATTCAGG-1     1 0.000
#> GGAGCCACCTTCTA-1     1 0.000
#> GGAGCGCTACGCAT-1     2 0.000
#> GGAGCGCTCCGAAT-1     1 0.000
#> GGAGGATGCCACCT-1     1 0.000
#> GGAGGATGGTTGAC-1     2 0.000
#> GGAGGATGTCAGTG-1     2 0.000
#> GGAGGCCTCGTTGA-1     1 1.000
#> GGAGGCCTTTCTTG-1     1 0.000
#> GGAGGTGATACGCA-1     1 0.000
#> GGAGGTGATCGCTC-1     1 0.000
#> GGATACTGCAGCTA-1     1 0.000
#> GGATACTGTCTAGG-1     1 0.000
#> GGATAGCTCGTCTC-1     1 0.000
#> GGATAGCTCTGAAC-1     1 0.000
#> GGATGTACCAAAGA-1     1 0.000
#> GGATGTACGCGAAG-1     1 0.000
#> GGATGTACGTCTTT-1     2 1.000
#> GGATGTACGTGTCA-1     1 0.000
#> GGATTTCTAGGTTC-1     1 0.000
#> GGATTTCTTTGTCT-1     2 0.000
#> GGCAAGGAAAAAGC-1     2 0.249
#> GGCAAGGAAGAAGT-1     1 0.000
#> GGCAAGGACTTGGA-1     2 0.000
#> GGCAAGGAGGACTT-1     1 0.000
#> GGCAATACGCTAAC-1     1 0.000
#> GGCAATACGGCATT-1     1 0.000
#> GGCAATACGTTTCT-1     1 0.000
#> GGCACGTGGCTTAG-1     2 0.000
#> GGCACTCTTTTGTC-1     1 0.000
#> GGCATATGCTTATC-1     1 1.000
#> GGCATATGGGGAGT-1     2 1.000
#> GGCATATGTGTGAC-1     1 0.000
#> GGCCACGACAGAGG-1     1 0.000
#> GGCCAGACTGGTTG-1     1 0.000
#> GGCCCAGAAAGTAG-1     2 0.000
#> GGCCGAACAACGAA-1     1 0.000
#> GGCCGAACGCAGAG-1     1 0.000
#> GGCCGAACGTAGGG-1     1 0.000
#> GGCCGAACTCTAGG-1     2 1.000
#> GGCCGATGCAGGAG-1     1 0.000
#> GGCCGATGCCGAAT-1     1 0.000
#> GGCCGATGTACTCT-1     1 0.000
#> GGCGACACTGCCCT-1     1 0.000
#> GGCGACTGCGTAAC-1     1 0.000
#> GGCGCATGCCTAAG-1     2 0.000
#> GGCGCATGCTCCAC-1     1 0.000
#> GGCGCATGTGGAAA-1     1 0.000
#> GGCGGACTAGAGGC-1     1 0.000
#> GGCGGACTAGGAGC-1     1 0.000
#> GGCGGACTCTGACA-1     1 0.000
#> GGCGGACTCTTGGA-1     1 0.751
#> GGCGGACTTACTGG-1     1 0.000
#> GGCGGACTTGAACC-1     1 0.000
#> GGCTAAACACCTGA-1     1 0.000
#> GGCTAAACTCTTAC-1     1 0.000
#> GGCTAATGAGCACT-1     1 0.747
#> GGCTAATGGTCTAG-1     1 0.000
#> GGCTCACTACTCAG-1     2 0.000
#> GGGAACGAAGCTCA-1     2 0.000
#> GGGAACGACACAAC-1     1 0.000
#> GGGAACGAGTGTCA-1     2 0.000
#> GGGAAGTGTTGAGC-1     2 0.000
#> GGGACCACACGTTG-1     1 1.000
#> GGGACCACAGAACA-1     1 0.000
#> GGGACCACGAATAG-1     1 0.000
#> GGGACCACGTCATG-1     1 0.000
#> GGGACCACTCAAGC-1     1 0.000
#> GGGACCACTCGTGA-1     1 0.000
#> GGGACCACTGCATG-1     1 0.000
#> GGGACCTGACCCTC-1     2 0.000
#> GGGACCTGCTTGCC-1     1 0.000
#> GGGACCTGTGGAGG-1     1 0.000
#> GGGATGGACGACAT-1     1 0.000
#> GGGATGGATACTTC-1     1 0.000
#> GGGATGGATGGTTG-1     2 0.000
#> GGGATTACGTCTAG-1     1 0.000
#> GGGCAAGATGCATG-1     2 0.000
#> GGGCACACGGTGAG-1     2 0.000
#> GGGCACACGTTGCA-1     1 0.000
#> GGGCAGCTTGGGAG-1     1 0.000
#> GGGCAGCTTTTCTG-1     1 0.000
#> GGGCCAACCTTGGA-1     2 0.000
#> GGGCCAACGCGTTA-1     1 0.000
#> GGGCCAACTACGCA-1     2 0.000
#> GGGCCAACTCCAAG-1     1 0.000
#> GGGCCATGATGGTC-1     1 0.000
#> GGGCCATGTTGACG-1     1 0.000
#> GGGTAACTCAGCTA-1     1 0.000
#> GGGTAACTCTAGTG-1     1 0.000
#> GGGTAACTCTGGAT-1     1 0.000
#> GGGTTAACGTGCAT-1     2 1.000
#> GGTAAAGAGCTAAC-1     1 1.000
#> GGTACAACTGCAAC-1     1 0.000
#> GGTACATGAAAGCA-1     1 0.000
#> GGTACATGAGCTCA-1     1 0.000
#> GGTACATGCGGTAT-1     1 0.000
#> GGTACATGGTTACG-1     1 0.000
#> GGTACATGTGGGAG-1     1 0.000
#> GGTACTGAACTCTT-1     2 0.000
#> GGTAGTACACCACA-1     1 0.000
#> GGTAGTACACTAGC-1     2 0.000
#> GGTAGTACCCTGTC-1     1 0.000
#> GGTAGTACGCCATA-1     2 0.000
#> GGTAGTACTGTCTT-1     1 0.000
#> GGTATCGAGACAAA-1     2 1.000
#> GGTATCGATGAACC-1     1 0.000
#> GGTCAAACCAAAGA-1     1 0.000
#> GGTCTAGAGAAACA-1     2 0.000
#> GGTCTAGATAGCGT-1     2 0.000
#> GGTGATACCGACTA-1     1 0.000
#> GGTGATACGACTAC-1     2 0.000
#> GGTGATACTGTTTC-1     1 0.000
#> GGTGGAGAAACGGG-1     1 0.751
#> GGTGGAGAAGTAGA-1     1 0.000
#> GGTGGAGACAGATC-1     1 1.000
#> GGTGGAGATCGATG-1     1 0.000
#> GGTGGAGATCTCTA-1     2 0.000
#> GGTGGAGATTACTC-1     1 0.000
#> GGTTTACTACGCAT-1     1 0.249
#> GTAACGTGACCTCC-1     2 0.000
#> GTAACGTGATCGGT-1     1 0.000
#> GTAACGTGCAGCTA-1     1 0.000
#> GTAACGTGGTTGAC-1     1 0.000
#> GTAAGCACAACGGG-1     1 0.000
#> GTAAGCACTCATTC-1     1 0.000
#> GTAAGCTGGTACCA-1     2 0.000
#> GTAATAACCTTCTA-1     2 0.000
#> GTAATAACGTTGTG-1     1 0.000
#> GTACCCTGACAGTC-1     2 0.000
#> GTACCCTGGAGCTT-1     1 0.000
#> GTACCCTGTCCTTA-1     1 1.000
#> GTACCCTGTGAACC-1     1 0.000
#> GTACGTGAACGTTG-1     1 0.000
#> GTACTTTGTCGACA-1     1 0.000
#> GTAGACTGAGATGA-1     2 0.000
#> GTAGACTGTATTCC-1     1 0.000
#> GTAGCAACAGTCGT-1     2 0.000
#> GTAGCAACCATTTC-1     1 0.253
#> GTAGCAACGGTAGG-1     2 0.000
#> GTAGCATGCACTCC-1     1 0.000
#> GTAGCATGTAAGCC-1     2 0.000
#> GTAGCCCTGACGTT-1     1 0.000
#> GTAGCTGAAGCTAC-1     2 0.000
#> GTAGCTGAATTCGG-1     1 0.000
#> GTAGGTACACGGGA-1     2 0.000
#> GTAGTGACCTCATT-1     1 0.000
#> GTAGTGTGAGCGGA-1     1 1.000
#> GTAGTGTGAGGCGA-1     2 0.000
#> GTAGTGTGTGGTTG-1     1 0.000
#> GTATCACTGGTAGG-1     2 0.000
#> GTATCTACAGAAGT-1     1 1.000
#> GTATCTACGACGAG-1     1 0.000
#> GTATCTACGTTACG-1     1 0.000
#> GTATTAGAAACAGA-1     2 1.000
#> GTATTAGAGGTCTA-1     1 0.000
#> GTATTCACACAGCT-1     1 0.000
#> GTATTCACGGGTGA-1     1 0.498
#> GTCAACGACACTGA-1     1 0.000
#> GTCAACGAGTGTAC-1     2 0.000
#> GTCAATCTACACCA-1     1 0.000
#> GTCAATCTGTAGCT-1     1 0.249
#> GTCAATCTTGTGGT-1     1 0.000
#> GTCACCTGCCTCCA-1     1 0.000
#> GTCACCTGTCCCGT-1     1 0.000
#> GTCATACTAATCGC-1     1 0.000
#> GTCATACTGCGATT-1     1 1.000
#> GTCATACTTCGCCT-1     2 1.000
#> GTCATACTTTACCT-1     1 0.000
#> GTCATACTTTGACG-1     1 0.000
#> GTCCAAGAAAAACG-1     1 0.000
#> GTCCACTGACCTCC-1     1 0.000
#> GTCCACTGGGTACT-1     2 0.000
#> GTCCAGCTACGGGA-1     1 0.000
#> GTCCCATGTGGTGT-1     2 0.000
#> GTCGAATGAAGGCG-1     2 0.000
#> GTCGACCTGAATGA-1     2 1.000
#> GTCGACCTGTTCAG-1     1 0.000
#> GTCGCACTTGAGAA-1     1 0.000
#> GTCTAACTGGTCTA-1     2 0.000
#> GTCTAGGAGCTTCC-1     2 0.000
#> GTGAACACACTCTT-1     1 0.000
#> GTGAACACTCAGGT-1     1 0.000
#> GTGACCCTTAAGCC-1     1 0.000
#> GTGATGACAAGTGA-1     1 0.000
#> GTGATGACCTGAGT-1     1 0.000
#> GTGATGACGGTTTG-1     1 0.000
#> GTGATTCTCATTTC-1     1 0.000
#> GTGATTCTCTCTCG-1     2 0.000
#> GTGATTCTGGTTCA-1     1 1.000
#> GTGATTCTGTCGAT-1     1 0.000
#> GTGATTCTTAGCGT-1     1 0.000
#> GTGCCACTCAGGAG-1     1 0.000
#> GTGGATTGCACTAG-1     2 0.000
#> GTGGATTGCGGAGA-1     1 0.000
#> GTGGATTGTAACGC-1     1 0.000
#> GTGTACGATCAGTG-1     1 0.000
#> GTGTAGTGGGTACT-1     1 0.000
#> GTGTATCTAGCCTA-1     1 0.000
#> GTGTATCTAGTAGA-1     1 0.000
#> GTGTATCTGTTACG-1     1 0.000
#> GTGTCAGAAGCGTT-1     1 0.000
#> GTTAAAACCGAGAG-1     2 0.000
#> GTTAAATGCTCGAA-1     1 0.000
#> GTTAAATGTCGACA-1     1 0.000
#> GTTAACCTAGCTAC-1     1 0.000
#> GTTAACCTTGCTTT-1     2 0.000
#> GTTAGGTGCACTCC-1     1 0.000
#> GTTAGGTGCCAGTA-1     2 0.000
#> GTTAGGTGCCCAAA-1     2 0.000
#> GTTAGGTGGAACTC-1     1 0.000
#> GTTAGTCTAAGAAC-1     1 0.000
#> GTTATAGAGGACAG-1     1 0.000
#> GTTATGCTTTCATC-1     1 0.000
#> GTTCAACTGGGACA-1     2 1.000
#> GTTCAACTTATGCG-1     1 0.000
#> GTTGACGAGCCCTT-1     1 0.751
#> GTTGACGATATCGG-1     2 0.000
#> GTTGAGTGGTCTTT-1     2 0.000
#> GTTGAGTGTGCTTT-1     1 0.000
#> GTTGATCTGGGACA-1     1 0.000
#> GTTGATCTTTTCAC-1     1 0.502
#> GTTGGATGTTTACC-1     2 0.000
#> GTTGTACTATTCCT-1     2 0.000
#> GTTGTACTTTTGGG-1     1 0.000
#> GTTTAAGACCATGA-1     2 0.000
#> GTTTAAGACTGTCC-1     1 0.000
#> TAAACAACCAACCA-1     1 0.000
#> TAAACAACGAATCC-1     1 0.000
#> TAAAGACTCAGGAG-1     1 0.000
#> TAAATCGATGAGGG-1     1 0.000
#> TAACAATGTGCCCT-1     1 0.000
#> TAACACCTTCGCTC-1     2 0.000
#> TAACACCTTCGTAG-1     2 0.000
#> TAACACCTTGTTTC-1     2 1.000
#> TAACATGACACTAG-1     1 0.000
#> TAACCGGACTTACT-1     1 0.000
#> TAACGTCTCAACCA-1     2 0.000
#> TAACGTCTCATTGG-1     1 0.000
#> TAACTAGAATTTCC-1     1 0.000
#> TAACTAGACTTAGG-1     1 0.000
#> TAACTAGATCTGGA-1     1 0.000
#> TAACTCACGAGGAC-1     2 0.000
#> TAACTCACGTACAC-1     1 0.000
#> TAACTCACGTATCG-1     2 0.000
#> TAACTCACTCTACT-1     1 1.000
#> TAAGAACTGTGTCA-1     2 0.000
#> TAAGAGGACTAAGC-1     1 0.000
#> TAAGAGGACTTGTT-1     2 1.000
#> TAAGATACGGTTCA-1     2 0.000
#> TAAGATTGCGTAGT-1     1 0.000
#> TAAGATTGTTGCTT-1     1 0.000
#> TAAGCGTGAGGTTC-1     2 0.000
#> TAAGCGTGGACAAA-1     2 0.000
#> TAAGCGTGGGAAAT-1     1 0.000
#> TAAGCGTGTGCTCC-1     2 0.000
#> TAAGGCTGCCATGA-1     1 0.000
#> TAAGGCTGCTGCTC-1     1 0.000
#> TAAGGCTGTCTCGC-1     2 0.000
#> TAAGGGCTGCTGTA-1     1 1.000
#> TAAGGGCTTTACTC-1     1 0.000
#> TAAGTAACCGAGAG-1     1 0.000
#> TAAGTAACCTCCAC-1     1 0.000
#> TAAGTAACCTGTAG-1     1 0.000
#> TAAGTAACTTGTCT-1     1 0.000
#> TAATGATGAGCGGA-1     1 0.000
#> TAATGCCTCATGAC-1     1 0.000
#> TAATGCCTCGTCTC-1     2 0.000
#> TAATGTGAAGATGA-1     1 0.000
#> TAATGTGACTGCAA-1     2 0.000
#> TAATGTGATTACTC-1     1 0.000
#> TACAAATGGGTACT-1     1 0.000
#> TACAATGAAAACAG-1     2 0.000
#> TACAATGACTTAGG-1     1 0.000
#> TACAATGATGCTAG-1     1 0.000
#> TACACACTCACACA-1     1 0.000
#> TACACACTCTTACT-1     1 0.249
#> TACATAGAACGCAT-1     1 0.000
#> TACATCACACGGGA-1     1 0.000
#> TACATCACCTGTTT-1     2 0.000
#> TACATCACGCTAAC-1     1 0.000
#> TACATCACTGAACC-1     2 0.000
#> TACCATTGAGGTTC-1     1 0.000
#> TACCATTGCGGGAA-1     2 0.000
#> TACCATTGGGGATG-1     2 0.000
#> TACCATTGTGAGGG-1     2 0.000
#> TACCGGCTGTTGGT-1     1 0.000
#> TACGAGTGATCTCT-1     1 0.000
#> TACGAGTGATGCTG-1     2 0.000
#> TACGAGTGCGGAGA-1     1 0.000
#> TACGAGTGGTTGGT-1     1 0.000
#> TACGATCTAGTGTC-1     1 0.000
#> TACGATCTCACTGA-1     2 0.000
#> TACGATCTTACGAC-1     1 0.000
#> TACGCAGAGAATCC-1     1 0.249
#> TACGCCACATTCCT-1     1 0.000
#> TACGCCACTCCCAC-1     2 0.000
#> TACGCCACTCCGAA-1     1 0.000
#> TACGGAACGCGTTA-1     1 0.000
#> TACGGCCTGGGACA-1     2 1.000
#> TACGTACTACGGAG-1     1 0.000
#> TACGTACTCAGTTG-1     1 0.000
#> TACGTACTCCCGTT-1     1 0.000
#> TACGTTACAGAAGT-1     1 0.000
#> TACGTTACCAAGCT-1     2 0.000
#> TACTAAGAAAGGTA-1     1 0.000
#> TACTAAGAATCACG-1     1 0.000
#> TACTAAGATGATGC-1     2 0.000
#> TACTAAGATTGCGA-1     1 0.000
#> TACTACACGAGAGC-1     1 0.000
#> TACTACACTTACCT-1     1 0.000
#> TACTACTGAACCTG-1     2 0.000
#> TACTACTGATGTCG-1     1 1.000
#> TACTACTGATTCTC-1     1 0.000
#> TACTACTGTATGGC-1     1 0.000
#> TACTCAACGGTCTA-1     2 0.000
#> TACTCAACTGCTAG-1     1 0.000
#> TACTCCCTCAGTTG-1     1 0.000
#> TACTCTGAATCGAC-1     1 1.000
#> TACTCTGACGAGTT-1     1 0.000
#> TACTCTGATTGACG-1     1 0.000
#> TACTGGGATCGATG-1     1 0.000
#> TACTGTTGAAAGCA-1     1 0.000
#> TACTGTTGAGGCGA-1     2 1.000
#> TACTGTTGCTGAAC-1     1 0.502
#> TACTTGACTCCTCG-1     1 0.000
#> TACTTGACTGGTGT-1     1 0.000
#> TACTTTCTTTTGGG-1     1 0.000
#> TAGAAACTAATCGC-1     1 0.000
#> TAGAAACTGCTTCC-1     2 0.000
#> TAGAAACTGGGATG-1     1 1.000
#> TAGAATTGCGACAT-1     1 0.000
#> TAGAATTGTATCGG-1     1 0.000
#> TAGACGTGCTTGAG-1     1 0.000
#> TAGACGTGTCGCTC-1     1 0.000
#> TAGAGCACCTTACT-1     1 0.000
#> TAGATTGACTTGTT-1     1 0.000
#> TAGATTGAGGCATT-1     1 0.000
#> TAGCATCTCAGCTA-1     2 0.000
#> TAGCATCTCCCTCA-1     1 0.000
#> TAGCATCTGCTGTA-1     2 0.000
#> TAGCATCTGGGACA-1     1 0.000
#> TAGCATCTTGTCGA-1     1 0.000
#> TAGCCCACAAAAGC-1     1 0.000
#> TAGCCCACAGCCAT-1     1 0.502
#> TAGCCCACAGCTAC-1     2 0.253
#> TAGCCCACCCACAA-1     1 0.000
#> TAGCCCTGCGGAGA-1     1 0.000
#> TAGCCGCTTACGAC-1     1 0.000
#> TAGCCGCTTACTTC-1     1 0.000
#> TAGCCGCTTTCCAT-1     2 0.000
#> TAGCTACTGAATAG-1     1 0.000
#> TAGCTACTGTAGCT-1     1 0.000
#> TAGCTACTTTTGCT-1     1 0.000
#> TAGGACTGTGCTGA-1     1 0.000
#> TAGGAGCTAAGGCG-1     1 0.000
#> TAGGAGCTGAGGGT-1     1 0.000
#> TAGGAGCTTGCATG-1     1 0.000
#> TAGGCAACCGTCTC-1     1 0.000
#> TAGGCATGCTCTCG-1     2 0.502
#> TAGGCATGGCGAGA-1     1 0.000
#> TAGGCTGATGCCTC-1     2 0.000
#> TAGGGACTGAACTC-1     1 1.000
#> TAGGTCGACACTGA-1     1 0.000
#> TAGGTCGAGGATCT-1     1 0.000
#> TAGGTGACACACTG-1     1 0.000
#> TAGGTGACACGTTG-1     1 0.000
#> TAGGTGTGTTCTGT-1     1 0.249
#> TAGGTTCTGAAGGC-1     1 0.000
#> TAGGTTCTTCTTAC-1     2 0.000
#> TAGGTTCTTGCTGA-1     2 0.000
#> TAGTAAACCTCGCT-1     1 0.000
#> TAGTAAACGTCACA-1     1 0.000
#> TAGTAATGAGATCC-1     1 0.000
#> TAGTACCTAAGAAC-1     2 0.000
#> TAGTATGATCTTAC-1     1 0.000
#> TAGTATGATTCTCA-1     1 0.000
#> TAGTCTTGGCTGTA-1     1 0.000
#> TAGTCTTGGGACTT-1     1 0.000
#> TAGTCTTGTGGAAA-1     1 0.000
#> TAGTGGTGAAGTGA-1     2 0.000
#> TAGTTAGAACCACA-1     2 1.000
#> TAGTTAGATGAACC-1     1 0.000
#> TATAAGACAACAGA-1     1 0.000
#> TATAAGACAGCTCA-1     2 0.000
#> TATAAGTGACACCA-1     2 0.000
#> TATAAGTGTATCGG-1     2 0.000
#> TATAAGTGTGGTGT-1     2 0.000
#> TATACAGAACCCTC-1     1 0.000
#> TATACAGAAGAACA-1     1 0.000
#> TATACAGATCCAGA-1     1 0.000
#> TATACCACCTGATG-1     1 0.000
#> TATACGCTACCAAC-1     1 0.000
#> TATAGATGGACGGA-1     1 0.000
#> TATAGATGTTCCGC-1     2 0.000
#> TATCCAACCAGCTA-1     2 0.000
#> TATCCAACTCTCTA-1     1 0.000
#> TATCGACTACTAGC-1     1 0.000
#> TATCGACTCGATAC-1     2 0.000
#> TATCGTACAGATGA-1     1 0.000
#> TATCGTACATTCCT-1     2 0.000
#> TATCTCGAGAGATA-1     1 0.000
#> TATCTGACAGGTTC-1     1 0.751
#> TATCTGACTGTTTC-1     1 0.000
#> TATCTTCTAAACAG-1     1 0.000
#> TATGAATGGAGGAC-1     1 1.000
#> TATGAATGTTTGCT-1     2 0.000
#> TATGCGGATAACCG-1     1 0.249
#> TATGGGTGCATCAG-1     2 0.000
#> TATGGGTGCTAGCA-1     1 0.000
#> TATGGTCTCTACCC-1     1 0.000
#> TATGTCACGGAACG-1     1 0.000
#> TATGTCACTAACCG-1     2 0.000
#> TATGTCACTTCTCA-1     1 0.000
#> TATGTGCTCCGATA-1     2 0.000
#> TATGTGCTGGATTC-1     1 0.000
#> TATTGCTGAAGAAC-1     2 0.000
#> TATTGCTGCCGTTC-1     1 0.000
#> TATTGCTGTCTGGA-1     1 0.000
#> TATTGCTGTGCACA-1     1 0.000
#> TATTTCCTATTGGC-1     2 0.000
#> TATTTCCTGGAGGT-1     2 1.000
#> TATTTCCTGGTGTT-1     1 0.000
#> TCAACACTGTTTGG-1     2 0.000
#> TCAAGGACAGCGTT-1     1 0.000
#> TCAAGGACATTCTC-1     1 1.000
#> TCAAGGACGGTGTT-1     2 0.000
#> TCAATCACACTCTT-1     1 0.000
#> TCAATCACAGTCGT-1     2 0.000
#> TCACAACTATGTGC-1     1 0.000
#> TCACAACTTTGCTT-1     2 0.000
#> TCACATACACTTTC-1     1 0.000
#> TCACATACAGGGTG-1     1 0.000
#> TCACCCGAGACGGA-1     2 0.000
#> TCACCGTGCTCGCT-1     2 0.000
#> TCACCTCTACGACT-1     1 0.000
#> TCACCTCTTCCAAG-1     2 0.000
#> TCACGAGAGGAGGT-1     1 0.000
#> TCACTATGGGGCAA-1     1 0.000
#> TCACTATGGTTGTG-1     1 0.000
#> TCAGACGACGCTAA-1     1 0.000
#> TCAGACGACGTTAG-1     2 1.000
#> TCAGAGACTCCAGA-1     1 0.000
#> TCAGCAGACTCCAC-1     1 0.000
#> TCAGCGCTCTAGTG-1     1 0.000
#> TCAGCGCTGGATCT-1     1 0.000
#> TCAGCGCTGGTATC-1     1 0.000
#> TCAGGATGAAGTAG-1     1 0.000
#> TCAGGATGCCTTTA-1     2 0.000
#> TCAGTGGAAGATCC-1     1 0.000
#> TCAGTTACCTACGA-1     2 0.000
#> TCAGTTACTAGAAG-1     1 0.000
#> TCATCAACCCGATA-1     1 0.000
#> TCATCAACTGTTCT-1     2 0.000
#> TCATCATGCAGTTG-1     1 0.000
#> TCATCCCTTACTGG-1     1 0.000
#> TCATTCGATACAGC-1     2 0.000
#> TCCACGTGGAAACA-1     1 0.000
#> TCCACTCTACACTG-1     1 0.000
#> TCCACTCTGAGCTT-1     2 0.000
#> TCCACTCTTACTTC-1     1 0.000
#> TCCATAACAAAGTG-1     1 0.000
#> TCCATAACCGTAGT-1     1 0.000
#> TCCATAACGATGAA-1     1 0.000
#> TCCATAACTACGCA-1     1 0.000
#> TCCATCCTCCCTAC-1     1 1.000
#> TCCCACGATCATTC-1     1 0.000
#> TCCCATCTCAAAGA-1     2 0.000
#> TCCCGAACACAGTC-1     2 1.000
#> TCCCGAACTTCGCC-1     2 0.000
#> TCCCGATGAGATCC-1     1 0.000
#> TCCCGATGCCTGAA-1     2 0.000
#> TCCCTACTCAACTG-1     1 0.000
#> TCCGAAGACAATCG-1     2 0.000
#> TCCGAAGACGTTAG-1     1 0.000
#> TCCGGACTGAGGTG-1     1 0.000
#> TCCGGACTGTACGT-1     1 0.000
#> TCCTAAACATCGAC-1     1 0.000
#> TCCTAAACCGAGAG-1     1 0.000
#> TCCTAAACCGCATA-1     1 1.000
#> TCCTAATGGTTTGG-1     1 1.000
#> TCCTACCTGTCGTA-1     1 0.000
#> TCCTATGAAAAGCA-1     1 1.000
#> TCGAATCTCTGGTA-1     1 0.000
#> TCGACCTGCCGATA-1     2 0.000
#> TCGACGCTTCTATC-1     2 0.000
#> TCGACGCTTTGACG-1     1 0.000
#> TCGAGAACGACAGG-1     1 0.000
#> TCGAGAACGTTAGC-1     1 0.751
#> TCGAGCCTATCAGC-1     1 0.000
#> TCGAGCCTGCGAGA-1     1 0.000
#> TCGAGCCTTGTGAC-1     1 0.000
#> TCGATACTATTCCT-1     1 0.000
#> TCGATACTTGCACA-1     1 0.000
#> TCGATTTGATGCCA-1     2 0.000
#> TCGATTTGCACTCC-1     1 0.000
#> TCGATTTGCAGCTA-1     2 1.000
#> TCGATTTGCCTACC-1     2 0.000
#> TCGATTTGTCGTGA-1     1 0.000
#> TCGCAGCTAGATCC-1     1 0.000
#> TCGCCATGAGACTC-1     1 0.000
#> TCGCCATGTGGTCA-1     1 0.000
#> TCGGACCTAACAGA-1     1 0.000
#> TCGGACCTATAAGG-1     1 0.751
#> TCGGACCTGTACAC-1     1 0.000
#> TCGGTAGAGTAGGG-1     1 0.000
#> TCGGTAGATCCCAC-1     1 0.000
#> TCGTAGGATCGACA-1     1 0.000
#> TCGTTATGGACAAA-1     1 0.000
#> TCTAACACCAGTTG-1     1 1.000
#> TCTAACACGAGCAG-1     2 0.000
#> TCTAACTGAACCAC-1     1 0.000
#> TCTAAGCTAATGCC-1     1 0.000
#> TCTAAGCTTAGTCG-1     1 0.498
#> TCTAAGCTTCTAGG-1     2 0.000
#> TCTAAGCTTGTTCT-1     2 0.000
#> TCTAAGCTTTCGCC-1     1 0.000
#> TCTACAACGACTAC-1     2 0.000
#> TCTAGACTTAGAAG-1     2 0.000
#> TCTAGTTGCACCAA-1     2 0.000
#> TCTATGTGAAGAGT-1     2 0.000
#> TCTATGTGAGTCTG-1     1 0.000
#> TCTCAAACCTAAGC-1     1 0.000
#> TCTCTAGAATTTCC-1     1 0.000
#> TCTGATACACGTGT-1     1 0.000
#> TCTGATACTCGCCT-1     1 0.000
#> TCTTACGAACCTGA-1     2 0.000
#> TCTTCAGAGCTACA-1     2 0.000
#> TCTTGATGCGGAGA-1     1 0.000
#> TGAAATTGGTGAGG-1     2 0.000
#> TGAACCGAAAACGA-1     1 0.000
#> TGAACCGACTACTT-1     2 0.000
#> TGAACCGATTCGGA-1     2 0.000
#> TGAAGCACTCACGA-1     1 0.000
#> TGAAGCTGAACGAA-1     1 0.000
#> TGAAGCTGCATGGT-1     1 0.000
#> TGAAGCTGCGTAAC-1     1 0.000
#> TGAATAACCACTTT-1     1 0.000
#> TGAATAACTCCCAC-1     2 1.000
#> TGACACGACCTTAT-1     1 0.000
#> TGACCAGACAACCA-1     1 0.000
#> TGACCAGAGGATTC-1     1 0.000
#> TGACCGCTAAAAGC-1     1 0.000
#> TGACCGCTCTGCAA-1     1 0.000
#> TGACGATGCAAAGA-1     2 0.000
#> TGACGCCTGTACCA-1     1 0.751
#> TGACGCCTTTACTC-1     1 1.000
#> TGACTGGAAGAGAT-1     2 0.000
#> TGACTGGACCGTAA-1     1 0.000
#> TGACTGGACGCAAT-1     1 0.000
#> TGACTGGAGGACAG-1     1 0.000
#> TGACTGGATTCTCA-1     1 0.000
#> TGACTTACACACCA-1     1 0.000
#> TGACTTACAGTCTG-1     2 0.000
#> TGACTTTGCGCATA-1     1 0.000
#> TGACTTTGTTTGTC-1     1 0.000
#> TGAGACACAAGGTA-1     1 0.000
#> TGAGACACTCAAGC-1     1 0.000
#> TGAGCTGAATGCTG-1     2 0.000
#> TGAGCTGACTGGAT-1     2 0.000
#> TGAGCTGATGCTAG-1     2 0.751
#> TGAGGACTCTCATT-1     2 0.000
#> TGAGGACTTCATTC-1     1 0.000
#> TGAGGTACGAACCT-1     2 0.000
#> TGAGTCGAGTTACG-1     1 0.000
#> TGAGTGACTGAGCT-1     1 0.000
#> TGATAAACGAATCC-1     1 0.000
#> TGATAAACTCCGTC-1     1 1.000
#> TGATAAACTTTCAC-1     1 0.000
#> TGATACCTCACTAG-1     2 0.000
#> TGATACCTGTTGGT-1     1 0.000
#> TGATACCTTATGCG-1     1 0.000
#> TGATACCTTGAAGA-1     1 0.000
#> TGATATGAACCTTT-1     1 0.000
#> TGATCACTAGCATC-1     1 0.000
#> TGATCACTCTCGCT-1     1 0.000
#> TGATCACTTCTACT-1     1 0.000
#> TGATCGGACTGACA-1     2 0.000
#> TGATCGGAGGAGCA-1     1 0.000
#> TGATCGGATATGCG-1     2 0.000
#> TGATTAGACATTGG-1     1 0.000
#> TGATTAGATGACTG-1     1 0.000
#> TGATTAGATGCTAG-1     1 0.000
#> TGATTCACTATGCG-1     1 0.000
#> TGATTCACTGTCAG-1     1 0.000
#> TGATTCTGCCGAAT-1     1 0.000
#> TGATTCTGCTCTTA-1     1 0.000
#> TGCAAGTGAGAACA-1     1 0.000
#> TGCAAGTGGGTAGG-1     2 0.000
#> TGCAATCTTCAGGT-1     2 0.000
#> TGCACAGACGACAT-1     2 0.498
#> TGCCAAGAGCAGTT-1     2 0.000
#> TGCCAAGATCTCTA-1     1 0.000
#> TGCCACTGAACGTC-1     1 0.000
#> TGCCACTGCGATAC-1     2 1.000
#> TGCCAGCTTGGCAT-1     1 0.000
#> TGCCCAACAGCAAA-1     1 0.000
#> TGCCCAACCGCATA-1     2 0.000
#> TGCCGACTCTCCCA-1     1 0.000
#> TGCGAAACAGTCAC-1     1 0.000
#> TGCGAAACGTTGCA-1     1 0.000
#> TGCGATGAACGGTT-1     1 0.000
#> TGCGATGACCTCGT-1     1 0.000
#> TGCGATGACTAGTG-1     1 0.000
#> TGCGATGACTGCTC-1     1 0.000
#> TGCGATGACTTGCC-1     1 0.000
#> TGCGATGAGTGCTA-1     2 0.000
#> TGCGCACTCTTGAG-1     2 0.000
#> TGCGTAGAATAAGG-1     2 0.000
#> TGCGTAGACGGGAA-1     1 0.000
#> TGCGTAGATGGTCA-1     2 0.000
#> TGCTAGGAAACCGT-1     1 0.000
#> TGCTAGGATAGTCG-1     1 0.000
#> TGCTATACGGTTCA-1     2 0.249
#> TGCTATACTGCTGA-1     1 0.000
#> TGCTGAGAGAGCAG-1     2 1.000
#> TGCTGAGATTATCC-1     1 0.000
#> TGGAAAGACTCTCG-1     1 0.000
#> TGGAAAGAGCGATT-1     1 0.000
#> TGGAAAGAGGTCAT-1     2 0.000
#> TGGAAAGATATGGC-1     1 0.000
#> TGGAACACAAACAG-1     2 1.000
#> TGGAACACGCTAAC-1     1 0.000
#> TGGAAGCTCAGATC-1     1 0.000
#> TGGACCCTACACTG-1     2 0.000
#> TGGACCCTCATGGT-1     1 0.000
#> TGGACCCTGGTACT-1     2 0.000
#> TGGACTGAGTATGC-1     1 0.000
#> TGGAGACTATCAGC-1     2 0.000
#> TGGAGACTTCAAGC-1     1 0.000
#> TGGAGACTTGACCA-1     1 0.249
#> TGGAGGGACGGAGA-1     2 0.000
#> TGGAGGGAGCTATG-1     1 0.000
#> TGGATCGATAAAGG-1     1 0.000
#> TGGATGTGACCTAG-1     1 0.000
#> TGGATGTGTGAAGA-1     1 0.000
#> TGGATTCTCATACG-1     1 0.000
#> TGGCAATGCTTGTT-1     1 0.000
#> TGGCACCTTCACGA-1     1 0.000
#> TGGCACCTTCAGTG-1     2 0.000
#> TGGGTATGAAGAGT-1     1 0.000
#> TGGGTATGCACAAC-1     1 0.000
#> TGGGTATGGTACGT-1     1 0.000
#> TGGGTATGTTTGGG-1     2 0.000
#> TGGTAGACATGCCA-1     1 0.000
#> TGGTAGACCCTCAC-1     2 1.000
#> TGGTAGACCTGATG-1     1 0.000
#> TGGTAGTGCACTGA-1     2 0.000
#> TGGTATCTAAACAG-1     1 0.000
#> TGGTATCTCTTCCG-1     1 0.000
#> TGGTCAGACCCAAA-1     1 0.000
#> TGGTTACTGACGTT-1     2 0.000
#> TGGTTACTGTTCTT-1     1 0.000
#> TGTAACCTAGAGGC-1     1 0.000
#> TGTAACCTTGCCTC-1     2 0.000
#> TGTAATGACACAAC-1     2 1.000
#> TGTAATGAGGTAAA-1     1 1.000
#> TGTACTTGCTCTAT-1     2 0.000
#> TGTAGGTGCGAGAG-1     1 0.000
#> TGTAGGTGCTATGG-1     1 0.000
#> TGTAGGTGCTCTAT-1     2 0.000
#> TGTAGGTGTGCTGA-1     1 0.000
#> TGTAGTCTTCCAGA-1     1 0.000
#> TGTAGTCTTGCACA-1     1 0.249
#> TGTATCTGTTAGGC-1     1 0.000
#> TGTATGCTCATGGT-1     1 0.000
#> TGTATGCTGTAGGG-1     1 0.000
#> TGTATGCTTTCATC-1     1 0.000
#> TGTCAGGAATACCG-1     1 0.000
#> TGTCAGGAGATGAA-1     2 0.000
#> TGTCTAACCCCTTG-1     1 0.000
#> TGTGACGATTCTCA-1     1 0.000
#> TGTGAGACTGTCAG-1     2 0.000
#> TGTGAGACTTGAGC-1     1 0.000
#> TGTGAGTGACCACA-1     1 0.000
#> TGTGAGTGAGTGCT-1     2 0.000
#> TGTGAGTGGAGATA-1     1 0.000
#> TGTGATCTCTCTAT-1     1 0.000
#> TGTGATCTGACACT-1     1 0.000
#> TGTGGATGGCCAAT-1     1 0.000
#> TGTTAAGACAAAGA-1     2 0.000
#> TGTTAAGATAAGGA-1     2 0.000
#> TGTTACACCGCATA-1     2 0.000
#> TGTTACACGACTAC-1     2 0.000
#> TGTTACTGGCTACA-1     1 0.000
#> TGTTACTGTAGTCG-1     1 0.498
#> TTAACCACCGTAAC-1     1 0.000
#> TTAACCACTAAGGA-1     1 0.000
#> TTAACCACTCAGAC-1     1 0.000
#> TTACACACGTGTTG-1     1 0.000
#> TTACACACTCCTAT-1     1 0.000
#> TTACCATGAATCGC-1     2 0.000
#> TTACCATGGTTGAC-1     1 0.000
#> TTACCATGTGTCTT-1     1 0.751
#> TTACCATGTTGTGG-1     1 0.000
#> TTACGACTGAGAGC-1     1 0.000
#> TTACGACTTGACAC-1     2 0.000
#> TTACGTACGTTCAG-1     2 1.000
#> TTACTCGAAGAATG-1     2 0.000
#> TTACTCGACGCAAT-1     2 0.000
#> TTACTCGAGGGTGA-1     1 0.000
#> TTACTCGATCTACT-1     2 0.249
#> TTAGAATGTGGTGT-1     1 0.000
#> TTAGAATGTGTAGC-1     1 0.498
#> TTAGACCTCCTACC-1     1 0.000
#> TTAGACCTCCTTTA-1     2 0.000
#> TTAGCTACAACCGT-1     1 0.000
#> TTAGCTACTGTCCC-1     2 0.000
#> TTAGCTACTTTCGT-1     1 0.000
#> TTAGGGACGCGAAG-1     1 0.000
#> TTAGGGTGCTGGAT-1     1 0.000
#> TTAGGGTGTCCTGC-1     2 0.000
#> TTAGGTCTACTTTC-1     2 0.000
#> TTAGTCACCAGTTG-1     1 0.000
#> TTAGTCTGAAAGCA-1     1 0.000
#> TTAGTCTGCCAACA-1     2 1.000
#> TTAGTCTGTGCACA-1     1 0.000
#> TTATCCGACTAGTG-1     1 0.000
#> TTATCCGAGAAAGT-1     2 0.000
#> TTATGAGAGATAAG-1     1 0.000
#> TTATGCACGTCACA-1     1 0.000
#> TTATGGCTTATGGC-1     2 0.000
#> TTATTCCTATGCTG-1     2 0.000
#> TTATTCCTGGACAG-1     1 0.000
#> TTATTCCTGGTACT-1     1 0.000
#> TTATTCCTTCGTGA-1     1 0.000
#> TTCAAAGATAAAGG-1     1 0.000
#> TTCAACACAACAGA-1     1 0.000
#> TTCAACACCCCAAA-1     2 0.000
#> TTCAACACGGACGA-1     2 0.000
#> TTCAAGCTAAGAAC-1     2 0.000
#> TTCAAGCTAGATGA-1     1 0.000
#> TTCAAGCTGTTGAC-1     1 0.000
#> TTCAAGCTTGATGC-1     1 0.000
#> TTCAAGCTTTCGCC-1     1 0.000
#> TTCACAACCCGTTC-1     2 0.000
#> TTCACAACGTCTGA-1     2 0.253
#> TTCAGACTACCCAA-1     1 0.249
#> TTCAGACTCTCGAA-1     1 0.000
#> TTCAGTACCGACTA-1     1 0.000
#> TTCAGTACTCAAGC-1     1 0.000
#> TTCAGTACTCCTAT-1     2 0.000
#> TTCAGTTGCCAAGT-1     1 0.000
#> TTCAGTTGTCCTTA-1     2 0.000
#> TTCAGTTGTCTAGG-1     1 0.000
#> TTCAGTTGTCTCGC-1     1 0.000
#> TTCATCGAGGTGGA-1     2 0.000
#> TTCATGTGTGGTGT-1     1 0.000
#> TTCATTCTATGTCG-1     2 0.000
#> TTCATTCTTCTCTA-1     1 0.000
#> TTCCAAACCTATGG-1     2 0.000
#> TTCCAAACCTCCCA-1     1 0.000
#> TTCCAAACTCCCAC-1     1 1.000
#> TTCCAAACTTGACG-1     1 0.000
#> TTCCATGACGAGAG-1     2 0.000
#> TTCCATGACTGTCC-1     1 0.000
#> TTCCCACTTGAGGG-1     2 1.000
#> TTCCCACTTGTCTT-1     2 0.000
#> TTCCTAGAAAGTGA-1     1 0.000
#> TTCCTAGACTAGTG-1     2 0.000
#> TTCGAGGACTCTAT-1     1 0.000
#> TTCGAGGAGGGCAA-1     1 0.000
#> TTCGAGGATAGAAG-1     2 0.000
#> TTCGATTGAGCATC-1     1 0.000
#> TTCGGAGAATGCCA-1     2 0.000
#> TTCGGAGATGTGCA-1     1 0.000
#> TTCGTATGAAAAGC-1     1 1.000
#> TTCGTATGGATAGA-1     1 0.000
#> TTCGTATGGTCTGA-1     1 0.000
#> TTCGTATGTCCTTA-1     2 0.000
#> TTCTACGAACGTAC-1     1 0.000
#> TTCTACGAGTTGGT-1     1 0.000
#> TTCTAGTGACACGT-1     1 0.000
#> TTCTAGTGCATGAC-1     2 0.000
#> TTCTAGTGGAGAGC-1     1 1.000
#> TTCTAGTGGTCACA-1     2 0.000
#> TTCTCAGAAGAGAT-1     1 0.000
#> TTCTCAGAAGCATC-1     1 0.000
#> TTCTCAGATGGAGG-1     1 0.000
#> TTCTGATGGAGACG-1     2 0.000
#> TTCTTACTCTGGAT-1     2 0.000
#> TTGAACCTCCTTGC-1     1 0.000
#> TTGAATGAACTACG-1     2 0.000
#> TTGAATGACTTACT-1     1 0.000
#> TTGAATGATCTCAT-1     1 0.000
#> TTGACACTCTGTAG-1     1 0.000
#> TTGACACTGATAAG-1     1 0.000
#> TTGAGGACAGAACA-1     2 0.000
#> TTGAGGACTACGCA-1     2 0.000
#> TTGAGGTGGACGGA-1     1 0.000
#> TTGCATTGAGCTAC-1     1 0.000
#> TTGCATTGCTAAGC-1     2 0.000
#> TTGCATTGTGACTG-1     1 0.000
#> TTGCTAACACCAAC-1     1 0.000
#> TTGCTAACACGCTA-1     2 0.000
#> TTGCTAACCACTCC-1     1 0.000
#> TTGCTATGGTACGT-1     2 0.000
#> TTGCTATGGTAGGG-1     2 0.000
#> TTGGAGACCAATCG-1     1 0.000
#> TTGGAGACGCTATG-1     2 0.000
#> TTGGAGACTATGGC-1     1 0.000
#> TTGGGAACTGAACC-1     1 0.000
#> TTGGTACTACTGGT-1     2 0.000
#> TTGGTACTCTTAGG-1     1 0.000
#> TTGGTACTGAATCC-1     1 0.000
#> TTGGTACTGGATTC-1     1 0.000
#> TTGTACACGTTGTG-1     1 0.000
#> TTGTACACTTGCAG-1     1 0.000
#> TTGTAGCTAGCTCA-1     1 0.000
#> TTGTAGCTCTCTTA-1     1 0.000
#> TTGTCATGGACGGA-1     2 0.000
#> TTTAGAGATCCTCG-1     1 0.000
#> TTTAGCTGATACCG-1     1 0.000
#> TTTAGCTGGATACC-1     2 0.000
#> TTTAGCTGTACTCT-1     2 0.000
#> TTTAGGCTCCTTTA-1     2 0.000
#> TTTATCCTGTTGTG-1     2 0.000
#> TTTCACGAGGTTCA-1     1 0.000
#> TTTCAGTGGAAGGC-1     1 0.000
#> TTTCAGTGTCACGA-1     1 0.000
#> TTTCAGTGTCTATC-1     2 0.000
#> TTTCAGTGTGCAGT-1     1 0.000
#> TTTCCAGAGGTGAG-1     1 0.000
#> TTTCGAACACCTGA-1     2 1.000
#> TTTCGAACTCTCAT-1     2 0.000
#> TTTCTACTGAGGCA-1     1 0.751
#> TTTCTACTTCCTCG-1     1 0.000
#> TTTGCATGAGAGGC-1     1 0.751
#> TTTGCATGCCTCAC-1     1 0.000

show/hide code output

get_classes(res, k = 3)
#>                  class     p
#> AAACATACAACCAC-1     1 0.000
#> AAACATTGAGCTAC-1     1 0.000
#> AAACATTGATCAGC-1     1 1.000
#> AAACCGTGCTTCCG-1     2 0.000
#> AAACCGTGTATGCG-1     3 0.000
#> AAACGCACTGGTAC-1     1 0.502
#> AAACGCTGACCAGT-1     1 0.751
#> AAACGCTGGTTCTT-1     1 0.751
#> AAACGCTGTAGCCA-1     3 1.000
#> AAACGCTGTTTCTG-1     2 0.000
#> AAACTTGAAAAACG-1     1 0.000
#> AAACTTGATCCAGA-1     1 0.000
#> AAAGAGACGAGATA-1     1 0.000
#> AAAGAGACGCGAGA-1     2 0.000
#> AAAGAGACGGACTT-1     3 1.000
#> AAAGAGACGGCATT-1     1 0.000
#> AAAGCAGATATCGG-1     2 0.000
#> AAAGCCTGTATGCG-1     1 0.000
#> AAAGGCCTGTCTAG-1     1 0.000
#> AAAGTTTGATCACG-1     1 0.000
#> AAAGTTTGGGGTGA-1     1 0.000
#> AAAGTTTGTAGAGA-1     1 0.000
#> AAAGTTTGTAGCGT-1     2 0.000
#> AAATCAACAATGCC-1     1 0.000
#> AAATCAACACCAGT-1     1 0.000
#> AAATCAACCAGGAG-1     1 0.000
#> AAATCAACCCTATT-1     2 0.000
#> AAATCAACGGAAGC-1     1 0.000
#> AAATCAACTCGCAA-1     1 0.000
#> AAATCATGACCACA-1     2 0.000
#> AAATCCCTCCACAA-1     1 1.000
#> AAATCCCTGCTATG-1     1 0.000
#> AAATGTTGAACGAA-1     2 0.000
#> AAATGTTGCCACAA-1     3 0.751
#> AAATGTTGTGGCAT-1     2 0.000
#> AAATTCGAAGGTTC-1     1 0.000
#> AAATTCGAATCACG-1     2 0.000
#> AAATTCGAGCTGAT-1     2 0.000
#> AAATTCGAGGAGTG-1     1 0.000
#> AAATTCGATTCTCA-1     3 0.000
#> AAATTGACACGACT-1     1 1.000
#> AAATTGACTCGCTC-1     1 0.249
#> AACAAACTCATTTC-1     1 0.000
#> AACAAACTTTCGTT-1     1 0.000
#> AACAATACGACGAG-1     1 0.000
#> AACACGTGCAGAGG-1     1 1.000
#> AACACGTGGAAAGT-1     1 0.000
#> AACACGTGGAACCT-1     2 0.000
#> AACACGTGGCTACA-1     1 0.000
#> AACACGTGTACGAC-1     2 0.000
#> AACAGCACAAGAGT-1     2 0.000
#> AACATTGATGGGAG-1     2 0.000
#> AACCAGTGATACCG-1     2 0.000
#> AACCCAGATCGCTC-1     1 0.000
#> AACCGATGCTCCCA-1     1 0.000
#> AACCGATGGTCATG-1     1 0.000
#> AACCGATGTTCTAC-1     2 0.000
#> AACCGCCTAGCGTT-1     1 0.000
#> AACCGCCTCTACGA-1     2 0.000
#> AACCTACTGTGAGG-1     2 0.000
#> AACCTACTGTGTTG-1     1 0.000
#> AACCTTACGAGACG-1     1 0.000
#> AACCTTACGCGAGA-1     3 0.000
#> AACCTTACTAACGC-1     2 0.000
#> AACCTTTGGACGGA-1     1 0.000
#> AACCTTTGTACGCA-1     2 0.000
#> AACGCAACAAGTAG-1     1 0.000
#> AACGCATGACCCAA-1     1 0.000
#> AACGCATGCCTTCG-1     1 0.000
#> AACGCATGTACTTC-1     1 0.000
#> AACGCCCTCGGGAA-1     1 0.000
#> AACGCCCTCGTACA-1     3 0.000
#> AACGCCCTGGCATT-1     3 1.000
#> AACGTCGAGTATCG-1     3 0.000
#> AACGTGTGAAAGCA-1     1 0.000
#> AACGTGTGGCGGAA-1     1 0.000
#> AACGTGTGTCCAAG-1     1 0.000
#> AACGTGTGTGCTTT-1     1 0.502
#> AACTACCTTAGAGA-1     1 0.000
#> AACTCACTCAAGCT-1     2 0.000
#> AACTCACTTGGAGG-1     2 0.000
#> AACTCGGAAAGTGA-1     3 0.751
#> AACTCGGAAGGTCT-1     2 0.000
#> AACTCTTGCAGGAG-1     1 0.000
#> AACTGTCTCCCTTG-1     2 0.000
#> AACTTGCTACGCTA-1     1 0.000
#> AACTTGCTGGGACA-1     1 0.000
#> AAGAACGAGTGTTG-1     1 0.000
#> AAGAAGACGTAGGG-1     1 0.000
#> AAGACAGAAGTCTG-1     1 0.253
#> AAGACAGAGGATCT-1     1 0.000
#> AAGACAGATTACCT-1     2 0.000
#> AAGAGATGGGTAGG-1     1 0.000
#> AAGATGGAAAACAG-1     1 0.000
#> AAGATGGAGAACTC-1     2 0.000
#> AAGATGGAGATAAG-1     2 0.000
#> AAGATTACAACCTG-1     1 0.000
#> AAGATTACAGATCC-1     2 0.000
#> AAGATTACCCGTTC-1     2 0.000
#> AAGATTACCGCCTT-1     2 0.000
#> AAGATTACCTCAAG-1     3 0.000
#> AAGATTACTCCTCG-1     2 0.000
#> AAGCAAGAGCGAGA-1     1 0.000
#> AAGCAAGAGCTTAG-1     3 0.000
#> AAGCAAGAGGTGTT-1     3 0.000
#> AAGCACTGAGCAAA-1     1 0.000
#> AAGCACTGCATACG-1     1 0.751
#> AAGCACTGGTTCTT-1     1 0.000
#> AAGCCAACGTGTTG-1     1 0.000
#> AAGCCATGAACTGC-1     2 0.000
#> AAGCCATGACACGT-1     2 0.000
#> AAGCCATGCGTGAT-1     1 0.000
#> AAGCCATGTCTCGC-1     1 1.000
#> AAGCCTGACATGCA-1     3 1.000
#> AAGCCTGACCGAAT-1     2 0.000
#> AAGCGACTCCTCAC-1     2 0.000
#> AAGCGACTGTGTCA-1     1 0.000
#> AAGCGACTTACAGC-1     1 0.000
#> AAGCGACTTTGACG-1     2 0.000
#> AAGCGTACGTCTTT-1     1 0.000
#> AAGGCTTGCGAACT-1     3 0.000
#> AAGGTCACGGTTAC-1     2 0.000
#> AAGGTCACTGTTTC-1     1 0.000
#> AAGGTCACTTCCCG-1     1 1.000
#> AAGGTCTGACAGTC-1     1 0.000
#> AAGGTCTGCAGATC-1     1 0.000
#> AAGTAACTCTGAAC-1     2 0.000
#> AAGTAACTGAGATA-1     1 0.000
#> AAGTAGGATACAGC-1     3 0.000
#> AAGTATACCGAACT-1     1 0.000
#> AAGTCCGACTTGTT-1     1 0.000
#> AAGTCCGATAGAAG-1     1 0.000
#> AAGTCTCTAGTCGT-1     1 0.000
#> AAGTCTCTCGGAGA-1     3 0.498
#> AAGTGGCTTGGAGG-1     1 0.000
#> AAGTTCCTCATTCT-1     2 0.000
#> AAGTTCCTTCTTAC-1     1 0.000
#> AATAAGCTCGAATC-1     1 0.000
#> AATAAGCTCGTTGA-1     1 0.000
#> AATACCCTGGACGA-1     1 0.000
#> AATACCCTGGCATT-1     1 0.000
#> AATACTGAAAGGGC-1     3 0.000
#> AATACTGAATTGGC-1     3 0.000
#> AATAGGGAACCCTC-1     1 0.000
#> AATAGGGAGAATGA-1     3 0.000
#> AATCAAACTATCGG-1     3 1.000
#> AATCCGGAATGCTG-1     1 1.000
#> AATCCTACCGGTAT-1     1 0.000
#> AATCCTTGACGGGA-1     2 0.000
#> AATCCTTGGTGAGG-1     3 0.000
#> AATCGGTGGAACTC-1     3 0.000
#> AATCGGTGTGCTTT-1     1 0.000
#> AATCTAGAAAAGTG-1     1 0.000
#> AATCTAGAATCGGT-1     1 0.000
#> AATCTCACAGCCTA-1     2 0.000
#> AATCTCACTCTAGG-1     1 0.000
#> AATCTCTGAACAGA-1     1 0.000
#> AATCTCTGCTTTAC-1     3 0.000
#> AATGATACACCAAC-1     3 0.000
#> AATGATACGGTCAT-1     2 0.000
#> AATGCGTGACACCA-1     1 0.000
#> AATGCGTGGACGGA-1     2 0.000
#> AATGCGTGGCTATG-1     1 0.000
#> AATGGAGAATCGTG-1     2 0.000
#> AATGGAGATCCTTA-1     1 1.000
#> AATGGCTGACACCA-1     1 0.000
#> AATGGCTGCGTGAT-1     1 0.000
#> AATGGCTGTAAAGG-1     3 1.000
#> AATGGCTGTACTCT-1     3 0.000
#> AATGGCTGTGAAGA-1     1 0.000
#> AATGTAACGGTGGA-1     1 0.000
#> AATGTCCTCTTCTA-1     1 0.000
#> AATGTTGACAGTCA-1     1 0.000
#> AATGTTGAGTTGAC-1     2 0.000
#> AATGTTGATCTACT-1     1 0.249
#> AATTACGAATTCCT-1     2 0.000
#> AATTACGACTTCTA-1     1 0.000
#> AATTACGAGTGAGG-1     1 0.000
#> AATTACGATTGGCA-1     1 0.000
#> AATTCCTGCTCAGA-1     1 0.000
#> AATTGATGTCGCAA-1     2 0.000
#> AATTGTGACTTGGA-1     1 0.000
#> ACAAAGGAGGGTGA-1     1 0.000
#> ACAAATTGATTCTC-1     2 0.000
#> ACAAATTGCTCAGA-1     2 0.000
#> ACAAATTGTTGCGA-1     3 0.000
#> ACAACCGAGGGATG-1     3 0.000
#> ACAACCGAGTTACG-1     1 0.000
#> ACAAGAGAAGTCGT-1     2 0.000
#> ACAAGAGACTTATC-1     1 0.498
#> ACAAGAGAGTTGAC-1     1 0.000
#> ACAATCCTAACCGT-1     1 0.000
#> ACAATCCTTAGCGT-1     1 0.000
#> ACAATTGACTGACA-1     3 0.751
#> ACAATTGATGACTG-1     3 0.000
#> ACACAGACCATACG-1     3 0.000
#> ACACCAGAGGGCAA-1     3 1.000
#> ACACCCTGGTGTTG-1     3 0.000
#> ACACGAACAGTTCG-1     1 0.249
#> ACACGATGACGCAT-1     3 0.000
#> ACACGATGATGTGC-1     2 0.000
#> ACACGATGTCGTAG-1     1 1.000
#> ACACGATGTGGTCA-1     3 1.000
#> ACAGACACGGCATT-1     3 1.000
#> ACAGACACGTTGTG-1     1 0.000
#> ACAGCAACACCTAG-1     2 0.000
#> ACAGCAACCTCAAG-1     2 0.000
#> ACAGGTACCCCACT-1     1 0.000
#> ACAGGTACGCTGTA-1     1 0.751
#> ACAGGTACTGGTGT-1     3 0.000
#> ACAGTCGACCCAAA-1     1 1.000
#> ACAGTCGACCGATA-1     3 0.000
#> ACAGTGACTCACCC-1     1 0.751
#> ACAGTGACTCTATC-1     3 1.000
#> ACAGTGTGGTCACA-1     1 0.000
#> ACAGTGTGTTGCGA-1     2 0.000
#> ACATCACTCTACTT-1     2 0.000
#> ACATGGTGAAGCCT-1     1 0.000
#> ACATGGTGCAACCA-1     1 0.000
#> ACATGGTGCGAGTT-1     1 0.000
#> ACATTCTGGCATAC-1     1 0.000
#> ACATTCTGGGAACG-1     2 0.000
#> ACCAACGACATGCA-1     1 0.000
#> ACCACAGAAAGTAG-1     1 0.000
#> ACCACAGAGTTGGT-1     1 0.000
#> ACCACCTGTGTGCA-1     1 0.000
#> ACCACGCTACAGCT-1     1 0.000
#> ACCACGCTACCCAA-1     3 0.000
#> ACCACGCTGCGAGA-1     1 0.253
#> ACCACGCTGCTGTA-1     1 0.000
#> ACCAGCCTGACAGG-1     1 0.253
#> ACCAGTGAACGGTT-1     1 0.000
#> ACCAGTGAATACCG-1     2 0.000
#> ACCAGTGAGGGATG-1     1 0.000
#> ACCAGTGATGACTG-1     2 0.000
#> ACCATTACCTTCTA-1     1 0.000
#> ACCATTACGAGATA-1     3 0.000
#> ACCATTTGTCATTC-1     1 0.000
#> ACCCAAGAACTGTG-1     3 0.000
#> ACCCAAGAATTCCT-1     2 0.000
#> ACCCAAGAGGACAG-1     1 0.000
#> ACCCAAGATTCACT-1     1 0.000
#> ACCCACTGCGCCTT-1     2 0.000
#> ACCCACTGGACAGG-1     1 0.000
#> ACCCACTGGTTCAG-1     3 0.000
#> ACCCACTGTCGTAG-1     2 0.000
#> ACCCAGCTCAGAAA-1     1 0.000
#> ACCCAGCTGTTAGC-1     2 0.000
#> ACCCAGCTTGCTTT-1     1 0.000
#> ACCCGTTGATGACC-1     1 0.000
#> ACCCGTTGCTGCAA-1     1 0.000
#> ACCCGTTGCTTCTA-1     1 0.000
#> ACCCTCGACCTATT-1     3 1.000
#> ACCCTCGACGGTAT-1     1 0.000
#> ACCCTCGATAAGGA-1     2 0.000
#> ACCCTCGATCAAGC-1     2 0.000
#> ACCGTGCTACCAGT-1     1 0.751
#> ACCGTGCTGGAACG-1     1 0.000
#> ACCTATTGCTGAGT-1     1 0.498
#> ACCTATTGTGCCCT-1     2 0.000
#> ACCTCCGAGTCCTC-1     1 0.000
#> ACCTCCGATATGCG-1     1 0.000
#> ACCTCCGATGCTGA-1     1 0.000
#> ACCTCGTGAACCAC-1     3 1.000
#> ACCTGAGATATCGG-1     2 0.000
#> ACCTGGCTAAGTAG-1     3 0.000
#> ACCTTTGACTCCCA-1     2 0.000
#> ACCTTTGAGGAACG-1     2 0.000
#> ACCTTTGAGGAAGC-1     2 0.000
#> ACGAACACCTTGTT-1     3 0.000
#> ACGAACTGGCTATG-1     2 0.000
#> ACGAAGCTCTCCAC-1     1 0.000
#> ACGAAGCTCTGAGT-1     1 0.000
#> ACGACCCTATCTCT-1     2 0.000
#> ACGACCCTGATGAA-1     1 0.000
#> ACGACCCTTGACAC-1     1 0.000
#> ACGACCCTTGACCA-1     1 0.000
#> ACGAGGGACAGGAG-1     2 0.000
#> ACGAGGGACGAACT-1     1 0.000
#> ACGAGGGATGTAGC-1     1 0.000
#> ACGAGTACCCTAAG-1     1 0.000
#> ACGAGTACGAATCC-1     1 0.000
#> ACGATCGAGGACTT-1     3 1.000
#> ACGATCGAGTCACA-1     2 0.000
#> ACGATGACAATGCC-1     1 0.000
#> ACGATGACTGGTCA-1     1 0.000
#> ACGATTCTACGGGA-1     3 1.000
#> ACGCAATGGTTCAG-1     3 0.000
#> ACGCACCTGTTAGC-1     1 0.000
#> ACGCCACTGAACTC-1     2 0.000
#> ACGCCGGAAACCAC-1     2 0.000
#> ACGCCGGAAAGCCT-1     1 0.000
#> ACGCCGGAAATGCC-1     1 0.000
#> ACGCCTTGCTCCCA-1     2 0.000
#> ACGCGGTGGCGAGA-1     1 0.000
#> ACGCGGTGTGTGGT-1     1 0.000
#> ACGCGGTGTTTGCT-1     3 0.000
#> ACGCTCACAGTACC-1     1 0.000
#> ACGCTCACCCTTGC-1     1 0.000
#> ACGCTGCTGTTCTT-1     3 0.000
#> ACGGAACTCAGATC-1     3 0.000
#> ACGGAACTGTCGTA-1     2 0.000
#> ACGGAGGACTCTTA-1     2 0.000
#> ACGGATTGGGAGGT-1     1 0.000
#> ACGGATTGGTTAGC-1     1 0.000
#> ACGGCTCTGAGCAG-1     1 0.249
#> ACGGCTCTTGCACA-1     1 0.000
#> ACGGTAACCGCTAA-1     3 0.000
#> ACGGTAACCTTCGC-1     3 0.000
#> ACGGTAACGGTGGA-1     1 0.000
#> ACGGTAACTCGCAA-1     1 1.000
#> ACGGTATGAGTCGT-1     2 0.000
#> ACGGTATGGGTATC-1     1 0.000
#> ACGGTATGGTTGTG-1     1 0.000
#> ACGGTCCTAACGGG-1     1 1.000
#> ACGGTCCTCGGGAA-1     1 0.000
#> ACGTAGACAACCAC-1     1 0.000
#> ACGTAGACTACAGC-1     1 0.000
#> ACGTCAGAAACGAA-1     1 0.000
#> ACGTCAGAGAGCTT-1     2 0.000
#> ACGTCAGAGGGATG-1     1 0.000
#> ACGTCCTGATAAGG-1     2 0.000
#> ACGTCCTGTGAACC-1     2 0.000
#> ACGTCGCTCCTGAA-1     3 0.000
#> ACGTCGCTCTATTC-1     2 0.751
#> ACGTCGCTTCTCAT-1     1 0.000
#> ACGTGATGCCATGA-1     2 0.000
#> ACGTGATGGGTCTA-1     1 0.000
#> ACGTGATGTAACCG-1     2 0.000
#> ACGTGATGTGACAC-1     3 0.000
#> ACGTGCCTCCGTAA-1     1 1.000
#> ACGTGCCTTCTATC-1     3 0.000
#> ACGTTACTTTCCAT-1     1 0.000
#> ACGTTGGAAAAGCA-1     1 0.000
#> ACGTTGGAAACCTG-1     3 0.000
#> ACGTTGGACCGTAA-1     2 0.000
#> ACGTTGGAGCCAAT-1     3 0.000
#> ACGTTGGATATGGC-1     1 0.000
#> ACGTTGGATCAGGT-1     2 0.000
#> ACGTTTACATCAGC-1     1 0.000
#> ACTAAAACCCACAA-1     1 1.000
#> ACTAAAACTCGACA-1     2 0.000
#> ACTACGGAATTTCC-1     1 0.000
#> ACTACGGACCTATT-1     1 0.000
#> ACTACGGATCGCTC-1     1 0.000
#> ACTACTACTAAGGA-1     1 0.000
#> ACTAGGTGGAACCT-1     3 1.000
#> ACTAGGTGGAACTC-1     1 0.000
#> ACTATCACCTTGGA-1     3 0.000
#> ACTATCACTGCCAA-1     1 0.000
#> ACTCAGGACTGAAC-1     1 0.000
#> ACTCAGGATCTATC-1     1 0.000
#> ACTCAGGATTCGTT-1     2 0.249
#> ACTCCTCTCAACTG-1     1 0.747
#> ACTCGCACGAAAGT-1     2 0.000
#> ACTCGCACTACGAC-1     2 0.000
#> ACTCTCCTGACACT-1     1 0.000
#> ACTCTCCTGCATAC-1     1 0.000
#> ACTCTCCTGTTTGG-1     1 0.000
#> ACTGAGACAACCAC-1     3 0.000
#> ACTGAGACCCATAG-1     2 0.000
#> ACTGAGACGTTGGT-1     1 0.000
#> ACTGCCACACACGT-1     3 0.000
#> ACTGCCACTCCGTC-1     3 0.000
#> ACTGGCCTTCAGTG-1     3 0.000
#> ACTGTGGACGTGTA-1     3 0.000
#> ACTGTGGATCTAGG-1     1 0.000
#> ACTGTTACCCACAA-1     2 0.000
#> ACTGTTACTGCAGT-1     1 0.000
#> ACTTAAGAACCACA-1     1 0.000
#> ACTTAAGATTACTC-1     2 0.000
#> ACTTAGCTGCGTAT-1     2 0.000
#> ACTTAGCTGGGAGT-1     1 0.000
#> ACTTCAACAAGCAA-1     3 0.000
#> ACTTCAACGTAGGG-1     3 0.000
#> ACTTCCCTTTCCGC-1     1 0.000
#> ACTTCTGACATGCA-1     1 0.000
#> ACTTGACTCCACAA-1     1 0.000
#> ACTTGGGAGAAAGT-1     2 0.000
#> ACTTGGGAGGTTTG-1     3 1.000
#> ACTTGGGATGTGAC-1     2 0.249
#> ACTTGGGATTGACG-1     2 0.000
#> ACTTGTACCTGTCC-1     1 0.000
#> ACTTTGTGGAAAGT-1     1 0.000
#> ACTTTGTGGATAGA-1     2 0.000
#> AGAAACGAAAGTAG-1     1 0.000
#> AGAAAGTGCGCAAT-1     1 0.000
#> AGAAAGTGGGGATG-1     2 0.000
#> AGAACAGAAATGCC-1     3 0.000
#> AGAACAGACGACTA-1     1 0.000
#> AGAACAGAGACAAA-1     1 0.000
#> AGAACGCTTTGCTT-1     1 0.000
#> AGAAGATGTGACTG-1     1 0.249
#> AGAATGGAAGAAGT-1     3 1.000
#> AGAATTTGTAACCG-1     1 0.000
#> AGAATTTGTAGAGA-1     1 0.000
#> AGACACACTGTAGC-1     1 0.000
#> AGACACTGTCAAGC-1     2 0.000
#> AGACCTGAAGTAGA-1     2 0.000
#> AGACCTGACCAACA-1     1 0.000
#> AGACCTGAGGAAGC-1     3 1.000
#> AGACGTACAGAGGC-1     1 0.000
#> AGACGTACCCCTAC-1     1 0.000
#> AGACGTACCTCTTA-1     2 0.000
#> AGACGTACTCGTGA-1     2 0.000
#> AGACTGACCATCAG-1     1 1.000
#> AGACTGACCCTTTA-1     1 0.000
#> AGACTTCTCATGCA-1     1 0.000
#> AGAGATGACAGTCA-1     1 0.000
#> AGAGATGACTGAAC-1     1 0.000
#> AGAGATGAGGTTTG-1     2 0.000
#> AGAGATGATCTCGC-1     1 0.000
#> AGAGATGATTGTGG-1     1 0.000
#> AGAGCGGAGGCAAG-1     2 0.000
#> AGAGTCTGGTCGTA-1     2 0.000
#> AGAGTGCTCAGCTA-1     1 0.000
#> AGAGTGCTCGAATC-1     1 0.000
#> AGAGTGCTGTCATG-1     1 0.000
#> AGAGTGCTGTCCTC-1     1 1.000
#> AGAGTGCTGTGTTG-1     1 0.249
#> AGATATACCCGTAA-1     3 0.000
#> AGATATACGATGAA-1     1 0.000
#> AGATATACTGTTCT-1     1 0.000
#> AGATATTGCCTACC-1     3 0.751
#> AGATATTGGCCAAT-1     2 0.000
#> AGATCGTGTCTGGA-1     2 0.000
#> AGATCGTGTTTGTC-1     1 0.000
#> AGATCTCTATCACG-1     1 0.000
#> AGATTAACGTTCTT-1     2 0.000
#> AGATTCCTATCGTG-1     1 0.000
#> AGATTCCTCACTTT-1     2 0.000
#> AGATTCCTGACGAG-1     2 0.000
#> AGATTCCTGTTCAG-1     3 0.000
#> AGCAAAGATATGCG-1     1 0.000
#> AGCACAACAGTCTG-1     1 0.000
#> AGCACTGAGGGAGT-1     1 0.000
#> AGCACTGATATGCG-1     1 0.498
#> AGCACTGATGCTTT-1     2 0.000
#> AGCACTGATTGCGA-1     1 0.000
#> AGCATCGAAGATCC-1     1 0.751
#> AGCATCGAAGGGTG-1     1 0.000
#> AGCATCGAGCTTCC-1     2 0.000
#> AGCATCGAGTGAGG-1     1 0.000
#> AGCATCGATAACCG-1     2 0.000
#> AGCATGACGATGAA-1     3 1.000
#> AGCCAATGGGGAGT-1     2 0.000
#> AGCCAATGTATCTC-1     1 0.000
#> AGCCACCTGGATCT-1     3 0.502
#> AGCCGGTGCCAATG-1     1 0.000
#> AGCCGGTGTGTTTC-1     1 0.000
#> AGCCGTCTCAATCG-1     1 0.000
#> AGCCGTCTGAGAGC-1     1 0.000
#> AGCCTCACGTTCGA-1     1 0.000
#> AGCCTCACTGTCAG-1     2 0.000
#> AGCCTCTGCAGTTG-1     1 0.000
#> AGCCTCTGCCAATG-1     3 0.000
#> AGCGAACTGGATCT-1     1 0.000
#> AGCGAACTTACTGG-1     1 0.000
#> AGCGATACGGAGCA-1     1 0.000
#> AGCGATTGAGATCC-1     3 0.000
#> AGCGCCGAATCTCT-1     1 0.000
#> AGCGCCGACAGAGG-1     1 1.000
#> AGCGCTCTACCTTT-1     1 0.000
#> AGCGGCACCGGGAA-1     1 0.000
#> AGCGGCTGATGTGC-1     1 0.000
#> AGCGGGCTTGCCAA-1     1 0.000
#> AGCGTAACATGCTG-1     1 0.000
#> AGCGTAACTGAGAA-1     2 0.000
#> AGCTCGCTACTGGT-1     1 0.000
#> AGCTCGCTCTGCTC-1     1 0.000
#> AGCTGAACCATACG-1     2 0.000
#> AGCTGAACCTCTCG-1     1 0.000
#> AGCTGCCTTGGGAG-1     2 0.000
#> AGCTGCCTTTCATC-1     1 0.751
#> AGCTGCCTTTCTGT-1     1 0.000
#> AGCTGTGATCCAAG-1     1 0.502
#> AGCTTTACAAGTAG-1     1 0.000
#> AGCTTTACACCAAC-1     3 1.000
#> AGCTTTACTCTCAT-1     1 0.000
#> AGGAAATGAGGAGC-1     1 0.502
#> AGGAACCTCTTAGG-1     2 0.000
#> AGGAACCTTGCCTC-1     3 0.000
#> AGGAATGATAACGC-1     1 0.000
#> AGGAATGATTTGTC-1     1 0.000
#> AGGAGTCTGGTTTG-1     1 0.000
#> AGGAGTCTTGTCAG-1     1 0.000
#> AGGATAGACATTTC-1     1 0.000
#> AGGATAGAGGATTC-1     3 0.000
#> AGGATGCTACTAGC-1     1 0.000
#> AGGATGCTTTAGGC-1     3 0.000
#> AGGCAACTGAAGGC-1     1 0.000
#> AGGCAGGAGTACCA-1     1 0.751
#> AGGCCTCTAGTCGT-1     1 0.000
#> AGGCCTCTCGGAGA-1     1 0.000
#> AGGCCTCTCGTAAC-1     1 0.000
#> AGGGACGACGTTGA-1     1 0.000
#> AGGGACGAGTCAAC-1     3 0.000
#> AGGGACGAGTTGTG-1     1 0.000
#> AGGGACGATAGAGA-1     1 0.249
#> AGGGACGATGCATG-1     3 0.000
#> AGGGAGTGAGCCTA-1     1 0.000
#> AGGGCCACCATACG-1     1 0.000
#> AGGGCGCTAACCAC-1     2 0.000
#> AGGGCGCTATGGTC-1     3 0.751
#> AGGGTGGACAGTCA-1     1 0.000
#> AGGGTGGACTCAAG-1     2 0.000
#> AGGGTGGAGTTGCA-1     3 0.498
#> AGGGTTTGTTCATC-1     2 0.000
#> AGGTCATGAGTGTC-1     1 0.000
#> AGGTCATGCTTATC-1     1 1.000
#> AGGTCTGATTCTCA-1     2 0.000
#> AGGTGGGAAGAATG-1     1 0.000
#> AGGTGGGAAGTTCG-1     1 0.000
#> AGGTGTTGGTTACG-1     1 0.000
#> AGGTTCGAACCTCC-1     2 0.000
#> AGGTTCGAACGTAC-1     2 0.000
#> AGGTTCGAGGGTGA-1     1 0.000
#> AGTAAGGAGTTTGG-1     1 1.000
#> AGTAAGGATTCTTG-1     1 0.000
#> AGTAATACATCACG-1     3 0.000
#> AGTAATACCGAACT-1     1 0.000
#> AGTAATTGTCCCAC-1     1 0.249
#> AGTACGTGAGGGTG-1     1 0.000
#> AGTACGTGCTGCAA-1     1 0.000
#> AGTACGTGCTTGGA-1     1 0.000
#> AGTACTCTACGTGT-1     1 0.000
#> AGTACTCTCAACCA-1     3 0.000
#> AGTACTCTCGGTAT-1     1 0.751
#> AGTAGGCTTGCCTC-1     2 0.000
#> AGTATAACTTGTCT-1     2 0.000
#> AGTATCCTAGAACA-1     1 0.000
#> AGTCACGATGAGCT-1     3 0.000
#> AGTCAGACGAATAG-1     1 0.000
#> AGTCAGACGCTTAG-1     1 0.000
#> AGTCAGACTAGAGA-1     3 0.751
#> AGTCAGACTGCACA-1     1 0.000
#> AGTCCAGATATCTC-1     1 0.000
#> AGTCCAGATTTCAC-1     1 0.000
#> AGTCGAACCAACCA-1     1 0.000
#> AGTCGCCTCCGTAA-1     1 0.000
#> AGTCTACTAGGGTG-1     2 0.000
#> AGTCTACTTGCATG-1     2 0.000
#> AGTCTTACACCACA-1     1 0.000
#> AGTCTTACTTCGCC-1     3 1.000
#> AGTCTTACTTCGGA-1     3 0.000
#> AGTGACTGCAACTG-1     2 0.000
#> AGTGTTCTAACCTG-1     1 0.000
#> AGTGTTCTATAAGG-1     1 0.000
#> AGTGTTCTCACTTT-1     2 0.000
#> AGTTAAACCACTTT-1     1 0.000
#> AGTTATGAACAGTC-1     2 0.000
#> AGTTATGACTGAGT-1     3 0.751
#> AGTTATGAGTTCAG-1     1 0.000
#> AGTTCTACCAGCTA-1     2 0.000
#> AGTTCTTGAAGCCT-1     3 0.000
#> AGTTGTCTACTACG-1     1 0.000
#> AGTTTAGATGGTCA-1     1 0.000
#> AGTTTCACGGTCTA-1     3 0.000
#> AGTTTGCTACAGTC-1     1 0.000
#> AGTTTGCTACTGGT-1     3 1.000
#> AGTTTGCTCCAAGT-1     1 0.000
#> ATAAACACAGTGCT-1     1 0.000
#> ATAAACACCACCAA-1     1 0.000
#> ATAACAACATGCTG-1     2 0.000
#> ATAACAACGTCTAG-1     1 0.000
#> ATAACAACTTTGTC-1     1 0.000
#> ATAACATGTACTCT-1     1 0.000
#> ATAACCCTGTTGGT-1     1 0.000
#> ATAACCCTTGGTAC-1     1 0.000
#> ATAAGTACGAATGA-1     1 0.000
#> ATAAGTTGGTACGT-1     2 0.000
#> ATAAGTTGTCTAGG-1     1 0.000
#> ATAATCGAGCTGAT-1     1 0.000
#> ATAATCGATGGTTG-1     1 0.000
#> ATAATGACCTACTT-1     1 0.000
#> ATAATGACTCGTGA-1     2 0.000
#> ATACAATGTTAGGC-1     1 0.000
#> ATACCACTCGTACA-1     2 0.000
#> ATACCACTCTAAGC-1     2 0.000
#> ATACCACTGCCAAT-1     3 0.249
#> ATACCGGAATGCTG-1     2 0.000
#> ATACCGGACATTTC-1     2 0.000
#> ATACCGGACTTCGC-1     1 0.000
#> ATACCGGAGGTGTT-1     2 0.000
#> ATACCGGATCTCGC-1     1 0.000
#> ATACCTACGCATCA-1     1 0.000
#> ATACCTTGGGGCAA-1     1 0.000
#> ATACGGACAGACTC-1     2 0.000
#> ATACGGACCTACTT-1     2 0.000
#> ATACGGACGAGGTG-1     1 0.000
#> ATACGGACTATGCG-1     1 0.000
#> ATACGGACTCTGGA-1     2 0.000
#> ATACGTCTTAACGC-1     2 0.000
#> ATACTCTGCTTCGC-1     2 0.000
#> ATACTCTGGTATGC-1     3 0.000
#> ATAGATACCATGGT-1     1 0.000
#> ATAGATACGACGAG-1     1 0.000
#> ATAGATTGGTGTAC-1     1 0.000
#> ATAGCCGAACGGAG-1     1 0.000
#> ATAGCGTGCAGATC-1     1 0.000
#> ATAGCGTGCCCTTG-1     2 0.000
#> ATAGCGTGGTATCG-1     2 0.000
#> ATAGCGTGTCTCTA-1     1 0.000
#> ATAGCTCTCTGATG-1     1 0.000
#> ATAGCTCTGAGGTG-1     1 0.000
#> ATAGGAGAAACAGA-1     2 0.000
#> ATAGGCTGTCAGAC-1     1 0.000
#> ATAGTCCTAGTGTC-1     2 0.000
#> ATAGTCCTTGCATG-1     1 1.000
#> ATAGTCCTTGTCGA-1     1 0.000
#> ATAGTTGACAACTG-1     1 0.000
#> ATAGTTGACCCTCA-1     2 0.000
#> ATAGTTGAGACGTT-1     1 0.000
#> ATAGTTGATAAGCC-1     1 0.000
#> ATATACGAAGCCAT-1     1 0.000
#> ATATACGAATTGGC-1     1 0.000
#> ATATAGTGGAATGA-1     2 0.000
#> ATATGCCTAGATCC-1     2 0.000
#> ATATGCCTGGACAG-1     1 0.000
#> ATATGCCTTCTCTA-1     1 0.000
#> ATATGCCTTGGTAC-1     1 0.000
#> ATCAAATGAGCCTA-1     2 0.000
#> ATCAAATGGGTAAA-1     2 0.000
#> ATCAACCTAAACGA-1     1 0.000
#> ATCAACCTGAGGAC-1     1 0.000
#> ATCAACCTTCTCTA-1     3 0.000
#> ATCAACCTTTGTCT-1     1 0.000
#> ATCACACTTTGTCT-1     1 0.000
#> ATCACGGATTTCGT-1     1 0.000
#> ATCATCTGACACCA-1     3 0.000
#> ATCATGCTAGAGTA-1     3 0.000
#> ATCATGCTGAACCT-1     1 0.000
#> ATCCAGGACGCTAA-1     2 0.000
#> ATCCAGGATGGAAA-1     1 0.000
#> ATCCATACTCCTTA-1     2 0.000
#> ATCCATACTTCATC-1     2 0.000
#> ATCCCGTGCAGTCA-1     3 0.000
#> ATCCCGTGCATGCA-1     1 0.000
#> ATCCCGTGGCTGAT-1     1 0.000
#> ATCCGCACGCATCA-1     1 0.000
#> ATCCTAACGACGGA-1     1 0.000
#> ATCCTAACGCTACA-1     3 0.498
#> ATCGACGAAACTGC-1     2 0.000
#> ATCGACGAATGACC-1     1 0.000
#> ATCGAGTGGACGTT-1     3 0.000
#> ATCGCAGAATCTCT-1     2 0.000
#> ATCGCAGAGTGTCA-1     1 0.000
#> ATCGCCACTGAGGG-1     3 0.502
#> ATCGCCTGGGTCAT-1     1 0.000
#> ATCGCCTGTGGCAT-1     1 0.000
#> ATCGCGCTCAGAGG-1     2 0.000
#> ATCGCGCTGGGATG-1     1 0.000
#> ATCGCGCTTTTCGT-1     1 0.000
#> ATCGGAACCAGTCA-1     1 0.000
#> ATCGGTGAGTCAAC-1     1 0.000
#> ATCGGTGATTGCAG-1     1 0.000
#> ATCGTTTGCCTACC-1     2 0.000
#> ATCGTTTGGGTACT-1     2 0.000
#> ATCGTTTGTGCCAA-1     2 0.000
#> ATCTACACCCGCTT-1     2 0.000
#> ATCTACACCGGGAA-1     1 0.000
#> ATCTCAACAGGAGC-1     1 0.000
#> ATCTCAACCTCGAA-1     1 0.000
#> ATCTCAACCTTGTT-1     2 0.000
#> ATCTGGGAAACCAC-1     2 0.000
#> ATCTGGGAAGTGTC-1     2 0.000
#> ATCTGGGATTCCGC-1     3 1.000
#> ATCTGTTGAACGGG-1     1 0.000
#> ATCTGTTGACCTCC-1     1 0.000
#> ATCTGTTGCCTTCG-1     2 0.000
#> ATCTGTTGGTTGCA-1     1 0.000
#> ATCTTGACACCAAC-1     1 0.000
#> ATCTTGACCTCCCA-1     2 0.000
#> ATCTTTCTGCATCA-1     3 1.000
#> ATCTTTCTGTTTCT-1     3 0.498
#> ATCTTTCTTGTCCC-1     3 0.000
#> ATGAAACTCTGTGA-1     1 0.000
#> ATGAAACTGAGGCA-1     1 0.000
#> ATGAAGGAACAGCT-1     3 0.249
#> ATGAAGGACCTGTC-1     1 0.000
#> ATGAAGGACCTTAT-1     1 0.000
#> ATGAAGGACTAGTG-1     1 0.000
#> ATGAAGGACTTGCC-1     3 0.000
#> ATGACGTGACGACT-1     1 0.000
#> ATGACGTGATCGGT-1     2 0.000
#> ATGAGAGAAAGTGA-1     1 0.000
#> ATGAGAGAACGCAT-1     1 0.000
#> ATGAGAGAAGTAGA-1     1 0.000
#> ATGAGCACACAGCT-1     1 0.000
#> ATGAGCACATCTTC-1     1 0.000
#> ATGATAACTTCACT-1     3 0.000
#> ATGATATGAAACAG-1     1 0.000
#> ATGATATGACTGGT-1     1 0.000
#> ATGATATGAGCACT-1     1 0.000
#> ATGATATGGTCATG-1     1 0.000
#> ATGATATGGTGCTA-1     3 0.000
#> ATGATATGTTGTCT-1     2 0.000
#> ATGCACGAATGTCG-1     1 0.000
#> ATGCACGACTGTAG-1     1 0.000
#> ATGCACGAGAACCT-1     1 0.000
#> ATGCACGAGTTCGA-1     1 0.000
#> ATGCACGATTGGTG-1     2 0.000
#> ATGCAGTGTTACCT-1     1 0.000
#> ATGCAGTGTTCTAC-1     1 0.000
#> ATGCCAGAACGACT-1     1 0.000
#> ATGCCAGACAGTCA-1     2 0.000
#> ATGCCGCTTGAACC-1     2 0.000
#> ATGCGATGCTATGG-1     2 0.000
#> ATGCGATGCTGAGT-1     1 0.000
#> ATGCGATGGTTACG-1     1 0.000
#> ATGCGCCTTCATTC-1     1 0.000
#> ATGCTTTGCGAATC-1     1 0.000
#> ATGCTTTGGGCGAA-1     1 0.751
#> ATGCTTTGTAGTCG-1     1 0.000
#> ATGGACACATCGGT-1     1 0.000
#> ATGGACACGCATCA-1     3 0.000
#> ATGGGTACAACCTG-1     1 0.000
#> ATGGGTACATCGGT-1     3 0.000
#> ATGGGTACTATTCC-1     1 0.249
#> ATGGGTACTGGGAG-1     1 0.000
#> ATGTAAACACCTCC-1     1 0.000
#> ATGTAAACCCGCTT-1     1 0.000
#> ATGTAAACGGGATG-1     2 0.000
#> ATGTAAACTCTCCG-1     1 0.000
#> ATGTAAACTTCACT-1     2 0.000
#> ATGTACCTCAGTCA-1     1 0.000
#> ATGTACCTTAGTCG-1     1 0.253
#> ATGTACCTTTATCC-1     2 0.000
#> ATGTACCTTTCACT-1     3 0.000
#> ATGTCACTAATGCC-1     2 0.000
#> ATGTCACTCTGCTC-1     1 0.000
#> ATGTCGGAGGTGAG-1     1 0.000
#> ATGTTCACAGTCTG-1     2 0.000
#> ATGTTCACCGTAGT-1     1 0.000
#> ATGTTGCTTTCAGG-1     1 0.253
#> ATTAACGATGAGAA-1     3 0.000
#> ATTAACGATGCAAC-1     3 0.000
#> ATTAAGACTGCAGT-1     1 0.000
#> ATTACCTGCCTTAT-1     2 0.000
#> ATTACCTGGAGGAC-1     2 0.000
#> ATTAGATGTTTCAC-1     1 0.000
#> ATTATGGAATCTCT-1     1 0.000
#> ATTCAAGAACGGGA-1     1 0.000
#> ATTCAAGACCTTTA-1     1 0.000
#> ATTCAGCTCATTGG-1     3 0.000
#> ATTCCAACCATTGG-1     2 0.000
#> ATTCCAACTTAGGC-1     3 0.000
#> ATTCGACTCACTAG-1     3 0.000
#> ATTCGACTGAATAG-1     2 0.000
#> ATTCGACTTTTGTC-1     2 0.000
#> ATTCGGGAAAGGCG-1     2 0.000
#> ATTCGGGATTAGGC-1     1 0.000
#> ATTCTTCTGATACC-1     1 0.249
#> ATTGAATGGACGGA-1     1 0.000
#> ATTGATGAAGGTTC-1     1 0.000
#> ATTGATGACTGAGT-1     1 0.000
#> ATTGATGAGCGAAG-1     1 0.502
#> ATTGATGATCTATC-1     1 0.000
#> ATTGCACTGACGGA-1     1 0.000
#> ATTGCACTGAGAGC-1     2 0.000
#> ATTGCACTGGAGCA-1     2 0.000
#> ATTGCACTTAGCCA-1     1 0.000
#> ATTGCACTTGCTTT-1     2 0.000
#> ATTGCTTGTTACTC-1     1 0.000
#> ATTGGTCTGACTAC-1     3 1.000
#> ATTGGTCTTGTCTT-1     1 0.000
#> ATTGTAGATTCCCG-1     2 0.000
#> ATTGTAGATTGCAG-1     1 0.000
#> ATTGTCTGCGTACA-1     1 0.000
#> ATTTAGGAACCATG-1     2 0.000
#> ATTTAGGACAGAGG-1     1 0.000
#> ATTTCCGAGATGAA-1     1 0.000
#> ATTTCCGAGTGCTA-1     1 0.253
#> ATTTCGTGTATGGC-1     3 0.000
#> ATTTCTCTACTTTC-1     2 0.000
#> ATTTCTCTAGCAAA-1     3 1.000
#> ATTTCTCTCACTTT-1     2 0.000
#> ATTTCTCTTCCCAC-1     1 0.000
#> ATTTGCACAAGATG-1     2 0.000
#> CAAAGCACAGCTCA-1     1 0.000
#> CAAAGCACCGTAAC-1     1 0.000
#> CAAAGCACGGTAAA-1     3 0.000
#> CAAAGCTGAAAGTG-1     1 0.000
#> CAAAGCTGTTGCTT-1     2 0.000
#> CAAATATGTGACAC-1     1 0.000
#> CAAATTGAGGGCAA-1     1 0.000
#> CAAATTGATGGAGG-1     2 0.000
#> CAACCAGAAAAGTG-1     1 0.000
#> CAACCAGAAGTGCT-1     1 0.000
#> CAACCAGAGTTCAG-1     2 0.000
#> CAACCAGATAGAAG-1     2 0.000
#> CAACCGCTGTTCAG-1     1 0.000
#> CAACCGCTTTGAGC-1     1 0.000
#> CAACGATGCGCAAT-1     2 0.000
#> CAACGTGACTCCAC-1     2 0.000
#> CAACGTGAGCCATA-1     3 0.000
#> CAACGTGATCAAGC-1     2 0.000
#> CAAGAAGACCACAA-1     3 0.249
#> CAAGAAGACGTCTC-1     2 0.000
#> CAAGAAGATTCTAC-1     1 0.000
#> CAAGACTGACCTGA-1     1 0.000
#> CAAGACTGAGTAGA-1     1 0.000
#> CAAGCTGACCATAG-1     2 0.000
#> CAAGCTGATCTATC-1     3 0.000
#> CAAGGACTGTTCAG-1     1 0.000
#> CAAGGACTTCTTTG-1     3 1.000
#> CAAGGTTGCTCCAC-1     1 0.000
#> CAAGGTTGTCATTC-1     1 0.000
#> CAAGGTTGTCTGGA-1     3 0.000
#> CAAGTCGAAACAGA-1     1 0.000
#> CAAGTCGATAGCGT-1     2 0.000
#> CAATAAACGCCATA-1     2 0.000
#> CAATAATGAACTGC-1     2 0.000
#> CAATATGACATGGT-1     1 0.000
#> CAATATGACCTTCG-1     3 0.000
#> CAATATGACGTTAG-1     1 0.000
#> CAATATGAGGAGCA-1     1 0.000
#> CAATCGGAGAAACA-1     1 0.000
#> CAATCTACTGACTG-1     3 0.000
#> CAATTCACCCAACA-1     3 0.000
#> CAATTCACGATAGA-1     1 0.000
#> CAATTCACTTGTGG-1     1 0.000
#> CAATTCTGCTTGTT-1     2 0.000
#> CAATTCTGGCGTAT-1     2 0.000
#> CACAACGATACGAC-1     1 0.000
#> CACAATCTTGTTCT-1     1 1.000
#> CACAATCTTTCCAT-1     1 0.000
#> CACACCTGCTTGAG-1     1 0.000
#> CACACCTGTATGGC-1     1 0.000
#> CACAGAACCCTTGC-1     3 0.751
#> CACAGAACCTGATG-1     1 0.000
#> CACAGATGGGATTC-1     1 0.000
#> CACAGATGGTTTCT-1     2 0.000
#> CACAGCCTGATACC-1     1 1.000
#> CACAGCCTTGCCAA-1     2 0.000
#> CACAGCCTTGTAGC-1     1 0.000
#> CACAGTGATGAAGA-1     2 0.000
#> CACATACTACAGCT-1     3 0.498
#> CACATGGAACACGT-1     1 0.000
#> CACATGGAAGTCGT-1     1 0.000
#> CACCACTGCCAACA-1     1 0.000
#> CACCACTGGCGAAG-1     3 0.000
#> CACCCATGTTCTGT-1     3 0.751
#> CACCGGGAATCGAC-1     1 0.000
#> CACCGGGACGAGAG-1     3 0.253
#> CACCGGGACGTGTA-1     1 0.000
#> CACCGGGACTTCTA-1     3 0.000
#> CACCGGGACTTGCC-1     3 0.000
#> CACCGGGATTCGGA-1     3 0.000
#> CACCGTACTAAGGA-1     1 0.000
#> CACCGTACTAGCGT-1     1 0.000
#> CACCTGACACCCAA-1     3 0.000
#> CACCTGACCAGAAA-1     1 0.000
#> CACCTGACCTCAAG-1     3 0.000
#> CACCTGACGAAAGT-1     1 0.000
#> CACCTGACTCGTAG-1     1 0.000
#> CACGAAACTTCCGC-1     1 0.000
#> CACGACCTCGATAC-1     1 0.000
#> CACGCTACAGAAGT-1     3 1.000
#> CACGCTACTGTTCT-1     1 0.000
#> CACGGGACAGAGTA-1     1 0.000
#> CACGGGACATAAGG-1     1 0.000
#> CACGGGACGTAGGG-1     1 0.000
#> CACGGGTGCTTCGC-1     3 0.000
#> CACGGGTGGAGGAC-1     3 0.000
#> CACGGGTGTGTTTC-1     1 0.000
#> CACTAACTCCTAAG-1     1 0.000
#> CACTAACTGAAAGT-1     1 0.000
#> CACTAGGATGATGC-1     1 0.000
#> CACTATACCCCGTT-1     1 0.000
#> CACTATACGTTTGG-1     3 0.000
#> CACTGAGACAGTCA-1     2 0.000
#> CACTGCACTTCATC-1     1 0.000
#> CACTGCTGAGACTC-1     2 0.000
#> CACTGCTGGAAAGT-1     1 0.000
#> CACTTAACCGAATC-1     1 0.000
#> CACTTAACCGTACA-1     1 0.000
#> CACTTTGACTCTAT-1     3 0.000
#> CACTTTGAGCTGTA-1     1 1.000
#> CAGAAGCTCTCAAG-1     1 0.000
#> CAGACATGAACGGG-1     1 0.000
#> CAGACATGTCGACA-1     1 0.000
#> CAGACCCTAAGGTA-1     2 0.000
#> CAGACCCTAATGCC-1     1 0.000
#> CAGACCCTAGGAGC-1     1 0.000
#> CAGACTGAGTATGC-1     1 0.000
#> CAGATCGAATGTCG-1     1 0.000
#> CAGATCGACCTGAA-1     1 0.253
#> CAGATCGATATGGC-1     1 0.000
#> CAGATGACATTCTC-1     3 0.000
#> CAGCAATGCCTTCG-1     1 0.000
#> CAGCAATGGAGGGT-1     3 0.000
#> CAGCAATGGTGCTA-1     1 0.000
#> CAGCAATGTCTACT-1     2 0.000
#> CAGCAATGTGACCA-1     1 0.000
#> CAGCAATGTGAGGG-1     2 0.000
#> CAGCACCTAAGCCT-1     1 0.000
#> CAGCACCTAGGCGA-1     1 0.000
#> CAGCACCTGTAGGG-1     2 0.000
#> CAGCATGACAACCA-1     2 0.000
#> CAGCATGAGACGTT-1     1 1.000
#> CAGCCTACCCAACA-1     1 0.000
#> CAGCCTTGCTACCC-1     2 0.000
#> CAGCCTTGGGGACA-1     1 0.000
#> CAGCGGACACCCTC-1     1 0.000
#> CAGCGGACCTTTAC-1     3 0.000
#> CAGCGTCTAAAGCA-1     1 0.000
#> CAGCGTCTTATCGG-1     1 0.000
#> CAGCTAGATGTGAC-1     2 0.000
#> CAGCTCTGAGGCGA-1     1 0.000
#> CAGCTCTGCAAGCT-1     3 0.000
#> CAGCTCTGTCGTAG-1     2 0.000
#> CAGCTCTGTGTGGT-1     3 0.000
#> CAGGAACTAACTGC-1     3 1.000
#> CAGGAACTCTCAGA-1     2 0.000
#> CAGGCCGAACACCA-1     1 0.000
#> CAGGCCGAACACGT-1     1 0.000
#> CAGGCCGAACGACT-1     1 0.249
#> CAGGCCGAATCTCT-1     2 0.000
#> CAGGCCGACTAGCA-1     1 0.000
#> CAGGGCACCATACG-1     1 0.000
#> CAGGGCACCCAACA-1     1 0.000
#> CAGGGCACTCCCGT-1     1 0.000
#> CAGGTAACAGACTC-1     2 0.000
#> CAGGTATGAGTCGT-1     1 0.000
#> CAGGTATGTGCTTT-1     1 0.253
#> CAGGTTGAGGATCT-1     1 0.000
#> CAGTGATGGACGGA-1     1 0.000
#> CAGTGATGGCTAAC-1     3 0.000
#> CAGTGATGGGACAG-1     1 0.000
#> CAGTGATGTAAGGA-1     1 0.000
#> CAGTGATGTACGCA-1     1 0.000
#> CAGTGTGATGTCAG-1     1 0.000
#> CAGTTACTAAGGTA-1     1 0.000
#> CAGTTACTGATAGA-1     1 0.000
#> CAGTTGGAAAGAGT-1     2 0.000
#> CAGTTGGACATACG-1     1 0.000
#> CAGTTTACACACGT-1     3 0.000
#> CAGTTTACCCCAAA-1     1 0.000
#> CATAAAACGGAGCA-1     2 0.000
#> CATAAATGAACTGC-1     1 0.000
#> CATAACCTTCTCCG-1     1 0.000
#> CATACTACCTCGAA-1     1 0.000
#> CATACTACCTGAAC-1     1 0.000
#> CATACTACGTACCA-1     2 0.000
#> CATACTTGGGTTAC-1     2 0.000
#> CATAGTCTAATCGC-1     1 0.000
#> CATAGTCTCACTTT-1     1 0.000
#> CATATAGACTAAGC-1     2 0.000
#> CATATAGATCAGGT-1     1 0.000
#> CATCAACTAGAAGT-1     1 0.000
#> CATCAACTCCCTCA-1     1 0.000
#> CATCAGGACTTCCG-1     3 0.000
#> CATCAGGATAGCCA-1     3 0.000
#> CATCAGGATCCTAT-1     2 0.000
#> CATCAGGATGCACA-1     2 0.000
#> CATCAGGATTTCGT-1     2 0.000
#> CATCATACCGCATA-1     2 0.000
#> CATCATACGGAGCA-1     1 0.000
#> CATCATACTCAAGC-1     1 0.000
#> CATCGCTGGGATCT-1     1 0.000
#> CATCGCTGTGGCAT-1     1 0.000
#> CATCGGCTATGCTG-1     1 0.000
#> CATCGGCTTTGGCA-1     1 0.000
#> CATCTCCTATGTGC-1     1 0.000
#> CATCTCCTCGAACT-1     2 0.000
#> CATGAGACACGGGA-1     1 0.000
#> CATGAGACGTTGAC-1     3 0.000
#> CATGAGACTCGCCT-1     1 0.000
#> CATGCCACGGGTGA-1     1 0.000
#> CATGCCACTGCCAA-1     1 0.000
#> CATGCGCTAGTCAC-1     2 0.000
#> CATGCGCTCAGATC-1     2 0.000
#> CATGCGCTTTGCAG-1     2 0.000
#> CATGGCCTAGGGTG-1     2 0.000
#> CATGGCCTGTGCAT-1     1 0.000
#> CATGTACTATCGTG-1     3 0.000
#> CATGTTACAGTCGT-1     3 0.000
#> CATGTTACCTGAGT-1     1 0.000
#> CATGTTTGGGGATG-1     2 0.000
#> CATTACACACGGAG-1     1 0.000
#> CATTACACCAACTG-1     3 0.000
#> CATTACACGGAGTG-1     1 0.000
#> CATTACACTACTCT-1     1 0.000
#> CATTAGCTCCACAA-1     2 0.000
#> CATTGACTAGCGGA-1     2 0.000
#> CATTGGGACTCGAA-1     1 0.000
#> CATTGTACAGCGTT-1     1 0.000
#> CATTGTACTCGATG-1     1 0.000
#> CATTGTACTTATCC-1     1 0.000
#> CATTGTACTTTGCT-1     2 0.000
#> CATTGTTGCTAGTG-1     1 0.000
#> CATTTCGACTCTAT-1     3 0.000
#> CATTTCGAGATACC-1     3 0.000
#> CATTTGACCACACA-1     3 0.000
#> CATTTGACCCTGAA-1     3 0.751
#> CATTTGTGACGACT-1     1 0.000
#> CATTTGTGCATTGG-1     1 0.000
#> CATTTGTGCGGAGA-1     1 0.000
#> CATTTGTGGGATCT-1     1 0.000
#> CCAAAGTGCTACGA-1     2 0.000
#> CCAAAGTGTGAGAA-1     2 0.000
#> CCAACCTGAAGTAG-1     3 0.000
#> CCAACCTGACGTAC-1     2 0.000
#> CCAACCTGTTCGCC-1     2 0.000
#> CCAAGAACCCAATG-1     1 0.000
#> CCAAGAACGTAGCT-1     1 0.000
#> CCAAGAACGTGTCA-1     1 0.000
#> CCAAGAACTACTGG-1     3 0.000
#> CCAAGAACTCCTAT-1     1 0.000
#> CCAAGATGTCATTC-1     1 0.000
#> CCAAGATGTTTCAC-1     1 0.751
#> CCAAGTGAGGAACG-1     1 0.000
#> CCAAGTGATCAAGC-1     1 0.000
#> CCAATTTGAACGTC-1     2 0.000
#> CCACCATGAACGTC-1     1 0.000
#> CCACCATGATCGGT-1     1 0.000
#> CCACCATGGACGAG-1     2 0.000
#> CCACCATGGGGAGT-1     1 0.000
#> CCACCATGTCCTGC-1     3 0.000
#> CCACTGACCCGCTT-1     2 0.000
#> CCACTGTGGGAAGC-1     2 0.000
#> CCACTGTGTGTAGC-1     1 0.000
#> CCACTTCTCGGGAA-1     2 0.000
#> CCAGAAACCCTGTC-1     1 0.000
#> CCAGAAACGAACTC-1     1 0.000
#> CCAGAAACGGTCTA-1     1 0.000
#> CCAGACCTCTGAGT-1     1 0.249
#> CCAGACCTTGTGGT-1     1 0.000
#> CCAGCACTGCGATT-1     2 0.000
#> CCAGCGGAAAGGCG-1     2 0.000
#> CCAGCGGACGACTA-1     2 0.000
#> CCAGCGGATGGGAG-1     1 0.000
#> CCAGCTACACAGTC-1     1 0.000
#> CCAGCTACCAGCTA-1     1 0.000
#> CCAGGTCTACACCA-1     1 0.000
#> CCAGGTCTAGCATC-1     2 0.000
#> CCAGGTCTATGGTC-1     1 0.000
#> CCAGTCACACTGGT-1     2 0.000
#> CCAGTCACACTGTG-1     1 0.000
#> CCAGTCACGTTGTG-1     1 0.000
#> CCAGTGCTAACCAC-1     1 0.000
#> CCAGTGCTCGTAGT-1     1 0.000
#> CCATCCGAAAGCAA-1     1 0.000
#> CCATCCGAACGACT-1     1 1.000
#> CCATCCGAAGGTTC-1     1 0.000
#> CCATCCGATTCGCC-1     2 0.000
#> CCATCGTGAACGGG-1     1 0.249
#> CCATCGTGCTAGAC-1     2 0.000
#> CCCAACACCTCGCT-1     1 0.000
#> CCCAACACGCATCA-1     1 0.000
#> CCCAACACTTTGTC-1     2 0.000
#> CCCAACTGCAATCG-1     2 0.000
#> CCCAGACTGCCTTC-1     2 0.000
#> CCCAGACTGGTTTG-1     1 0.000
#> CCCAGACTTTCGCC-1     2 0.000
#> CCCAGTTGCAGTTG-1     2 0.000
#> CCCAGTTGGGTACT-1     1 0.253
#> CCCAGTTGTCTATC-1     1 0.000
#> CCCGATTGTGTTTC-1     1 0.000
#> CCCGGAGAAGGGTG-1     2 0.000
#> CCCTACGAATTGGC-1     2 0.000
#> CCCTAGTGCAAAGA-1     1 0.000
#> CCCTCAGACACTTT-1     1 0.000
#> CCCTCAGACGAGAG-1     1 0.000
#> CCCTCAGAGGTCAT-1     1 0.000
#> CCCTGAACTAAAGG-1     1 0.000
#> CCCTGATGCAACCA-1     1 0.000
#> CCCTGATGCAAGCT-1     1 0.000
#> CCCTTACTAACCAC-1     2 0.000
#> CCCTTACTGCAGTT-1     1 0.000
#> CCGAAAACCTTGTT-1     2 0.000
#> CCGACACTGGTTTG-1     1 0.000
#> CCGACTACCCAGTA-1     2 0.000
#> CCGACTACCGTGTA-1     1 0.000
#> CCGACTACTGAGGG-1     1 1.000
#> CCGATAGACCTAAG-1     1 0.000
#> CCGATAGAGTTGGT-1     2 0.000
#> CCGCGAGACACACA-1     2 0.000
#> CCGCGAGAGGTTCA-1     1 1.000
#> CCGCTATGGGACGA-1     1 0.000
#> CCGCTATGTGCAAC-1     2 0.000
#> CCGCTATGTGCACA-1     2 0.000
#> CCGGTACTGTCCTC-1     1 0.000
#> CCGTACACAAGCAA-1     1 0.000
#> CCGTACACAGCGTT-1     1 0.000
#> CCGTACACGTCATG-1     3 0.000
#> CCGTACACGTTGGT-1     2 0.000
#> CCGTACACTAACGC-1     1 1.000
#> CCTAAACTTTCGTT-1     1 0.000
#> CCTAAGGACCCAAA-1     1 0.000
#> CCTAAGGACTAGCA-1     2 0.000
#> CCTAAGGAGGGCAA-1     3 0.249
#> CCTAAGGATGATGC-1     1 0.000
#> CCTAAGGATGTCAG-1     1 0.000
#> CCTACCGACTCTTA-1     1 0.000
#> CCTACCGAGGGATG-1     1 0.000
#> CCTAGAGAGGTGAG-1     1 0.000
#> CCTATAACCAAAGA-1     1 0.000
#> CCTATAACGAGACG-1     2 0.000
#> CCTATAACTCAGAC-1     1 0.000
#> CCTATAACTGCATG-1     2 0.000
#> CCTCGAACACTTTC-1     3 0.000
#> CCTCGAACCCGTAA-1     2 0.000
#> CCTCGAACGTATCG-1     1 0.000
#> CCTCGAACTTACTC-1     1 0.000
#> CCTCTACTCTTCGC-1     2 0.000
#> CCTCTACTGGCATT-1     1 0.000
#> CCTGACTGAAGTAG-1     1 1.000
#> CCTGACTGGGGAGT-1     1 0.000
#> CCTGACTGTGTCTT-1     1 0.000
#> CCTGCAACACGTTG-1     2 0.000
#> CCTGGACTCGTGAT-1     1 0.000
#> CCTTAATGCCCAAA-1     1 0.000
#> CCTTAATGTTCTAC-1     2 0.000
#> CCTTCACTACGACT-1     1 0.000
#> CCTTCACTCAGTCA-1     1 0.498
#> CCTTCACTGGAGTG-1     2 0.000
#> CCTTTAGATTCATC-1     2 0.000
#> CGAACATGCCCTAC-1     2 0.000
#> CGAACATGTCAGAC-1     1 0.000
#> CGAAGACTGGAACG-1     3 1.000
#> CGAAGACTGTTACG-1     1 0.498
#> CGAAGGGAAACCTG-1     3 0.000
#> CGAAGGGATCCGAA-1     1 0.000
#> CGAAGTACCAACTG-1     1 0.000
#> CGAATCGAGGAGCA-1     2 0.249
#> CGAATCGAGGAGGT-1     1 0.000
#> CGACAAACCCATAG-1     1 0.000
#> CGACAAACCGACAT-1     1 0.000
#> CGACCACTAAAGTG-1     3 0.000
#> CGACCACTGCCAAT-1     3 0.000
#> CGACCGGAAGGTCT-1     1 0.000
#> CGACCGGATGGAAA-1     1 0.000
#> CGACCTTGCTAGTG-1     1 0.000
#> CGACGTCTATCGTG-1     1 0.249
#> CGACGTCTCGTGTA-1     1 0.000
#> CGACGTCTGAGGCA-1     1 0.000
#> CGACTCACGTCGTA-1     1 0.000
#> CGACTCACGTTGCA-1     1 0.000
#> CGACTCTGTGTGAC-1     1 0.000
#> CGACTGCTTCCTCG-1     2 0.000
#> CGAGAACTAAGGCG-1     3 0.502
#> CGAGAACTACGTTG-1     1 0.000
#> CGAGAACTTGTTCT-1     2 0.000
#> CGAGATTGGACACT-1     3 0.000
#> CGAGATTGGCCATA-1     3 0.000
#> CGAGCCGAACACCA-1     1 0.000
#> CGAGCCGAGGCGAA-1     1 0.000
#> CGAGCGTGCTCCAC-1     1 0.000
#> CGAGCGTGGATACC-1     1 0.000
#> CGAGCGTGTATGCG-1     2 0.000
#> CGAGGAGACCTCCA-1     1 0.000
#> CGAGGAGATGTCGA-1     1 0.000
#> CGAGGCACCTATGG-1     3 0.000
#> CGAGGCACTATGCG-1     2 0.000
#> CGAGGCACTCTTCA-1     1 0.751
#> CGAGGCTGACGCTA-1     3 0.000
#> CGAGGCTGGCAGTT-1     2 0.000
#> CGAGGGCTACGACT-1     1 0.000
#> CGAGGGCTCGAATC-1     1 0.000
#> CGAGTATGTCACCC-1     2 0.000
#> CGATACGAACAGTC-1     2 0.000
#> CGATACGACAGGAG-1     3 0.000
#> CGATACGATTCACT-1     1 0.000
#> CGATAGACCCGTAA-1     2 0.000
#> CGATAGACCGTACA-1     3 1.000
#> CGATAGACGTAGGG-1     2 0.000
#> CGATAGACTGTTCT-1     1 0.000
#> CGATCAGAAGAACA-1     3 0.000
#> CGATCAGAGAGGGT-1     1 0.000
#> CGATCAGAGGTACT-1     1 0.000
#> CGATCAGATGTGAC-1     2 0.249
#> CGATCCACCGGGAA-1     3 0.000
#> CGATCCACTTCCAT-1     1 0.000
#> CGCAAATGCTCGAA-1     1 0.000
#> CGCAACCTCCTTGC-1     1 0.000
#> CGCAACCTGGACGA-1     1 0.000
#> CGCACGGAGGACGA-1     1 0.000
#> CGCACGGATCTTTG-1     1 0.000
#> CGCACTACAGAATG-1     1 0.000
#> CGCACTACAGCCAT-1     1 0.000
#> CGCACTACATTGGC-1     1 0.000
#> CGCACTACTCGCCT-1     1 0.000
#> CGCACTACTCGTGA-1     1 1.000
#> CGCACTTGTCACGA-1     2 0.000
#> CGCAGGACAGATCC-1     3 1.000
#> CGCAGGACCTACTT-1     1 0.000
#> CGCAGGACTTGTCT-1     2 0.000
#> CGCAGGTGCACTGA-1     1 0.000
#> CGCAGGTGCCATAG-1     2 0.000
#> CGCAGGTGGGAACG-1     3 1.000
#> CGCATAGATCACGA-1     2 0.000
#> CGCCATACTGCAAC-1     1 0.000
#> CGCCATTGAGAGGC-1     1 0.000
#> CGCCATTGCTATGG-1     1 0.000
#> CGCCATTGGAGACG-1     1 0.000
#> CGCCATTGGAGCAG-1     1 0.000
#> CGCCATTGTACTGG-1     1 0.000
#> CGCCGAGAGCTTAG-1     3 0.000
#> CGCCTAACGAATGA-1     2 0.000
#> CGCCTAACTGCTCC-1     1 0.000
#> CGCGAGACACAGCT-1     1 1.000
#> CGCGAGACAGGTCT-1     1 0.000
#> CGCGAGACGCTACA-1     1 0.000
#> CGCGATCTCAGTCA-1     2 0.000
#> CGCGATCTGTTGAC-1     2 0.000
#> CGCGATCTTTCTTG-1     1 0.000
#> CGCGGATGGCCAAT-1     1 0.000
#> CGCTAAGAATGTCG-1     1 0.000
#> CGCTAAGACAACTG-1     1 0.000
#> CGCTAAGACCCTTG-1     1 0.000
#> CGCTACTGAACAGA-1     2 0.000
#> CGCTACTGAGAACA-1     1 0.000
#> CGCTACTGTGAGCT-1     1 0.000
#> CGCTACTGTTCCCG-1     3 0.000
#> CGCTCATGCATTTC-1     2 0.000
#> CGGAATTGGTTTGG-1     1 0.253
#> CGGAATTGTGGAGG-1     1 0.000
#> CGGACCGATGCGTA-1     3 0.000
#> CGGACCGATGGGAG-1     1 0.000
#> CGGACTCTAAACAG-1     1 0.000
#> CGGACTCTCCAATG-1     1 0.000
#> CGGACTCTCCTCGT-1     3 0.000
#> CGGAGGCTATTCCT-1     1 0.000
#> CGGAGGCTTGGATC-1     1 0.000
#> CGGATAACAACGAA-1     2 0.000
#> CGGATAACAGCTCA-1     1 0.000
#> CGGATAACTCAGTG-1     2 0.000
#> CGGCACGAACTCAG-1     1 0.751
#> CGGCACGAAGGGTG-1     1 0.000
#> CGGCACGACTACGA-1     2 0.000
#> CGGCATCTTAGAAG-1     1 0.249
#> CGGCATCTTCGTAG-1     2 0.000
#> CGGCCAGAAAGGTA-1     1 0.000
#> CGGCCAGAGAGGCA-1     3 0.000
#> CGGCGAACCAGTCA-1     2 0.000
#> CGGCGAACGACAAA-1     3 0.000
#> CGGCGAACGGTCTA-1     1 0.000
#> CGGCGAACTACTTC-1     3 0.000
#> CGGGACTGCGTGTA-1     1 0.000
#> CGGGACTGGAATAG-1     3 0.000
#> CGGGCATGACCCAA-1     3 0.000
#> CGGGCATGTCTCTA-1     3 0.000
#> CGGGCATGTTGTGG-1     1 0.000
#> CGGTAAACTCGCAA-1     1 0.747
#> CGGTCACTGTTTGG-1     1 0.000
#> CGGTCACTTACTTC-1     1 0.000
#> CGTAACGATCGCCT-1     1 0.000
#> CGTACCACACACAC-1     1 0.000
#> CGTACCACACGTTG-1     1 0.000
#> CGTACCACCTCATT-1     1 0.000
#> CGTACCACGGAGCA-1     1 0.000
#> CGTACCTGGCATCA-1     3 0.000
#> CGTAGCCTCTCTCG-1     2 0.000
#> CGTAGCCTGCGAAG-1     1 0.000
#> CGTAGCCTGTATGC-1     2 0.000
#> CGTCAAGAAAGGTA-1     2 0.000
#> CGTCAAGAACGTGT-1     1 0.000
#> CGTCAAGACAGAGG-1     1 0.000
#> CGTCAAGACAGGAG-1     3 0.000
#> CGTCCATGCTCTTA-1     1 0.000
#> CGTCGACTTTCCGC-1     3 1.000
#> CGTGATGACGCTAA-1     1 0.000
#> CGTGATGAGGTTCA-1     1 0.498
#> CGTGCACTTATGGC-1     2 0.000
#> CGTGTAGAAAAACG-1     1 0.253
#> CGTGTAGACGATAC-1     3 0.000
#> CGTGTAGAGTTACG-1     3 0.000
#> CGTGTAGAGTTCAG-1     2 0.000
#> CGTGTAGATTCGGA-1     3 0.000
#> CGTTAGGAAACCAC-1     1 0.000
#> CGTTAGGATCATTC-1     2 0.000
#> CGTTATACCCTGAA-1     3 0.000
#> CGTTTAACTGGTCA-1     1 0.000
#> CTAAACCTCTGACA-1     3 0.000
#> CTAAACCTGTGCAT-1     1 0.000
#> CTAACACTAACGTC-1     1 0.000
#> CTAACACTAGTGCT-1     2 0.000
#> CTAACGGAACCGAT-1     3 0.000
#> CTAACGGATTTCTG-1     1 0.000
#> CTAACTACGGCAAG-1     1 1.000
#> CTAAGGACACCATG-1     1 0.000
#> CTAAGGACCGTTAG-1     1 0.000
#> CTAAGGACGCCATA-1     2 0.000
#> CTAAGGTGCCTAAG-1     1 0.000
#> CTAAGGTGTTGCAG-1     1 0.000
#> CTAAGGTGTTTCTG-1     1 0.000
#> CTAATAGAGCTATG-1     1 0.000
#> CTAATGCTTGTGGT-1     2 0.000
#> CTACAACTCCCGTT-1     3 0.000
#> CTACCTCTCAACCA-1     1 0.249
#> CTACGCACACCTAG-1     2 0.000
#> CTACGCACTCTCCG-1     1 0.000
#> CTACGCACTGGTCA-1     3 0.000
#> CTACGGCTTTCTTG-1     2 0.000
#> CTACTATGAACCAC-1     2 0.000
#> CTACTATGATGTGC-1     2 0.000
#> CTACTATGCTAAGC-1     1 0.000
#> CTACTATGTAAAGG-1     1 0.000
#> CTACTCCTATGTCG-1     3 0.000
#> CTACTCCTGCCATA-1     2 0.249
#> CTAGAGACACTTTC-1     1 0.000
#> CTAGAGACAGCATC-1     3 0.000
#> CTAGAGACTTTGGG-1     2 0.000
#> CTAGATCTCTCTAT-1     1 0.000
#> CTAGATCTTCGACA-1     1 0.000
#> CTAGGATGAGCCTA-1     1 0.253
#> CTAGGATGATCGTG-1     1 0.000
#> CTAGGCCTCTCAGA-1     1 0.000
#> CTAGGTGATGGTTG-1     2 0.000
#> CTAGTTACCAGAGG-1     1 0.000
#> CTAGTTACCGCATA-1     1 0.000
#> CTAGTTACGAAACA-1     3 0.000
#> CTATAAGATCGTTT-1     1 0.000
#> CTATACTGAGGTTC-1     2 0.000
#> CTATACTGCCAGTA-1     1 0.000
#> CTATACTGCGCTAA-1     2 0.000
#> CTATACTGCTACGA-1     3 0.000
#> CTATACTGTCTCAT-1     3 0.000
#> CTATACTGTTCGTT-1     1 0.000
#> CTATAGCTGTCACA-1     1 0.000
#> CTATAGCTTCGCTC-1     2 0.000
#> CTATAGCTTGCCTC-1     2 0.000
#> CTATCAACGAACTC-1     1 0.000
#> CTATCAACGCAGAG-1     1 0.000
#> CTATCAACTTTGGG-1     1 0.000
#> CTATCCCTCCACCT-1     2 0.000
#> CTATGTACGAGAGC-1     1 0.000
#> CTATGTACGCTTAG-1     1 0.000
#> CTATGTACTGTTTC-1     1 0.000
#> CTATGTTGAAAGCA-1     1 0.000
#> CTATGTTGTCCTCG-1     1 0.000
#> CTATGTTGTCTCGC-1     1 0.000
#> CTATTGACAAACGA-1     2 0.000
#> CTATTGACACTGGT-1     2 0.000
#> CTATTGACGGTGAG-1     2 0.000
#> CTATTGTGGCAAGG-1     1 0.000
#> CTCAATTGGTTCAG-1     1 0.000
#> CTCAATTGGTTGCA-1     2 0.000
#> CTCAGAGATAGAAG-1     1 0.000
#> CTCAGCACTCTAGG-1     1 0.000
#> CTCAGCACTGAACC-1     2 0.000
#> CTCAGCACTTGCAG-1     1 0.000
#> CTCAGCTGAACCTG-1     2 0.000
#> CTCAGCTGCAGTTG-1     1 0.000
#> CTCAGGCTCGTTGA-1     2 0.000
#> CTCAGGCTGCTAAC-1     3 1.000
#> CTCATTGACCTTAT-1     1 0.000
#> CTCATTGATGCTTT-1     2 0.000
#> CTCCACGAGAGATA-1     2 0.000
#> CTCCATCTCTTAGG-1     1 0.000
#> CTCCATCTGACGAG-1     1 0.000
#> CTCCGAACAAGTGA-1     2 0.000
#> CTCCTACTGCCTTC-1     2 0.000
#> CTCGAAGATGTGGT-1     1 0.000
#> CTCGAAGATTAGGC-1     2 0.000
#> CTCGACTGCTCTAT-1     1 0.000
#> CTCGACTGGGTGAG-1     1 0.000
#> CTCGACTGGTTGAC-1     3 0.000
#> CTCGAGCTCTGGAT-1     3 0.000
#> CTCGCATGACTTTC-1     1 0.751
#> CTCGCATGCTTAGG-1     1 0.000
#> CTCTAAACCTCGAA-1     1 0.000
#> CTCTAAACGGCGAA-1     1 0.000
#> CTCTAATGTCCAAG-1     2 0.000
#> CTGAACGACAGTCA-1     1 0.000
#> CTGAACGATGAGGG-1     3 1.000
#> CTGAAGACCCAACA-1     1 0.000
#> CTGAAGACGTGCAT-1     1 0.498
#> CTGAAGTGAAGCCT-1     2 0.000
#> CTGAAGTGCAGCTA-1     1 0.000
#> CTGAAGTGGCTATG-1     1 0.000
#> CTGAAGTGTCCAGA-1     1 0.000
#> CTGAATCTGAATAG-1     1 1.000
#> CTGACAGAATCGTG-1     3 0.000
#> CTGACCACAGCAAA-1     1 0.000
#> CTGAGAACCGGGAA-1     1 0.000
#> CTGAGAACGTAAAG-1     3 0.000
#> CTGATACTAGTAGA-1     1 0.000
#> CTGATTTGGTGTTG-1     2 0.000
#> CTGCAGCTAACCGT-1     1 0.000
#> CTGCAGCTGACACT-1     1 0.000
#> CTGCAGCTGGATTC-1     2 0.000
#> CTGCAGCTTGGCAT-1     1 1.000
#> CTGCCAACAGGAGC-1     1 0.000
#> CTGCCAACCAGCTA-1     1 0.000
#> CTGCCAACTAACCG-1     2 0.000
#> CTGCCAACTGCTCC-1     3 1.000
#> CTGCCAACTTGCAG-1     1 0.000
#> CTGCCAACTTGCTT-1     1 0.253
#> CTGCGACTCCACCT-1     3 0.751
#> CTGGAAACAAACGA-1     3 0.000
#> CTGGAAACATCGAC-1     1 0.000
#> CTGGATGACTGGAT-1     3 0.000
#> CTGGATGACTTGTT-1     1 1.000
#> CTGGATGATGTGAC-1     1 0.000
#> CTGGCACTCAAGCT-1     2 0.000
#> CTGTAACTAACCAC-1     1 0.000
#> CTGTAACTAGCGTT-1     1 0.000
#> CTGTATACGTAAAG-1     1 0.000
#> CTGTATACGTACGT-1     2 0.000
#> CTGTATACGTTGGT-1     1 0.000
#> CTGTGAGACAACCA-1     2 0.000
#> CTGTGAGACCTTGC-1     3 0.000
#> CTGTGAGACGAACT-1     2 0.000
#> CTGTGAGACTGTAG-1     2 0.000
#> CTTAAAGAACCTGA-1     1 0.000
#> CTTAACACCTGTAG-1     1 0.000
#> CTTAACACTATCGG-1     1 0.000
#> CTTAAGCTACCTAG-1     1 0.000
#> CTTAAGCTAGTACC-1     1 0.000
#> CTTAAGCTCATCAG-1     1 0.000
#> CTTAAGCTCCGCTT-1     1 0.000
#> CTTACAACTAACGC-1     1 0.000
#> CTTACAACTCCCGT-1     2 0.000
#> CTTACTGACGTACA-1     1 0.000
#> CTTAGACTAAACGA-1     1 0.747
#> CTTAGGGACTTGCC-1     1 0.502
#> CTTAGGGAGAATCC-1     1 0.000
#> CTTATCGACTCATT-1     1 0.000
#> CTTCACCTACCTGA-1     2 0.000
#> CTTCATGAAGCATC-1     1 0.000
#> CTTCATGAAGTACC-1     1 0.000
#> CTTCATGACCGAAT-1     1 0.000
#> CTTGAACTACGCAT-1     1 0.000
#> CTTGATTGAGGTTC-1     3 0.000
#> CTTGATTGATCTTC-1     2 0.000
#> CTTGATTGCATTCT-1     1 1.000
#> CTTGATTGTTTCGT-1     1 0.000
#> CTTGTATGACACCA-1     1 0.000
#> CTTGTATGCGCAAT-1     1 0.000
#> CTTTACGAGCGAAG-1     1 0.000
#> CTTTAGACCGTGAT-1     1 0.000
#> CTTTAGACGAGACG-1     1 0.000
#> CTTTAGACGATACC-1     1 0.000
#> CTTTAGACGTTGGT-1     1 0.000
#> CTTTAGACTCATTC-1     1 0.498
#> CTTTAGTGACGGGA-1     3 0.000
#> CTTTAGTGGGTGGA-1     1 0.000
#> CTTTCAGAGAAACA-1     1 0.000
#> CTTTGATGAGCACT-1     1 0.000
#> CTTTGATGTCTAGG-1     1 1.000
#> CTTTGATGTGTCCC-1     1 0.000
#> CTTTGATGTGTGGT-1     1 0.000
#> GAAACAGAACTACG-1     1 0.000
#> GAAACAGAATCACG-1     1 0.000
#> GAAACAGACATTCT-1     1 0.000
#> GAAACCTGATCGTG-1     1 0.000
#> GAAACCTGATGCCA-1     1 0.000
#> GAAACCTGCTTATC-1     1 0.000
#> GAAACCTGGACTAC-1     2 0.000
#> GAAACCTGTGCTAG-1     1 0.000
#> GAAAGATGATTTCC-1     1 0.000
#> GAAAGATGCTGATG-1     2 0.000
#> GAAAGATGCTTCGC-1     2 0.000
#> GAAAGATGTAAGGA-1     1 0.502
#> GAAAGCCTACGTTG-1     1 0.000
#> GAAAGTGAAAGTGA-1     2 0.000
#> GAAAGTGACCACAA-1     2 0.000
#> GAAAGTGACTCAAG-1     1 0.000
#> GAAATACTACCAAC-1     2 1.000
#> GAAATACTCTTAGG-1     1 0.000
#> GAAATACTTCCTCG-1     3 0.000
#> GAACACACGTGCAT-1     2 0.000
#> GAACACACTGCCTC-1     1 0.000
#> GAACAGCTAACTGC-1     2 0.000
#> GAACAGCTCTCAGA-1     2 0.000
#> GAACCAACCACAAC-1     1 0.000
#> GAACCAACTTCCGC-1     3 0.000
#> GAACCTGAACGTGT-1     1 0.751
#> GAACCTGAGAGACG-1     1 0.000
#> GAACCTGATGAACC-1     1 0.000
#> GAACGGGATACTTC-1     1 0.000
#> GAACTGTGACCTGA-1     2 0.000
#> GAACTGTGCCAGTA-1     2 0.000
#> GAAGAATGCAATCG-1     1 0.000
#> GAAGCGGACCTATT-1     2 0.000
#> GAAGCTACGAATGA-1     2 0.000
#> GAAGCTACGGTTTG-1     3 0.000
#> GAAGGGTGAAAGTG-1     1 0.000
#> GAAGGGTGCTTAGG-1     2 0.000
#> GAAGGTCTGAAAGT-1     3 0.498
#> GAAGGTCTGTTGCA-1     1 0.000
#> GAAGGTCTTAAAGG-1     2 0.000
#> GAAGTAGACTCCCA-1     3 0.000
#> GAAGTAGATCCAAG-1     2 0.000
#> GAAGTCACCCTCGT-1     2 0.000
#> GAAGTCACCCTGTC-1     1 0.000
#> GAAGTCTGTCGCAA-1     1 0.000
#> GAAGTCTGTTCTGT-1     1 0.000
#> GAAGTGCTAAACGA-1     3 0.000
#> GAAGTGCTCCGCTT-1     2 0.000
#> GAAGTGCTTAACCG-1     1 0.000
#> GAATGCACCCTAAG-1     1 0.000
#> GAATGCACCTTCGC-1     3 0.000
#> GAATGCTGCGGTAT-1     1 0.000
#> GAATTAACGATAAG-1     1 0.000
#> GAATTAACGGTCAT-1     1 0.000
#> GAATTAACGTCGTA-1     3 0.000
#> GAATTAACTGAAGA-1     1 0.000
#> GACAACACAGGCGA-1     1 0.000
#> GACAACACATCGTG-1     1 0.000
#> GACAACACTCGCCT-1     1 0.000
#> GACAACTGAGGTTC-1     1 0.000
#> GACAGGGAAGAGTA-1     1 0.000
#> GACAGGGAATGCCA-1     1 0.000
#> GACAGTACGAGCTT-1     2 0.000
#> GACAGTACTTCGGA-1     2 0.000
#> GACAGTTGAGTAGA-1     1 0.000
#> GACATTCTCCACCT-1     2 0.000
#> GACCAAACGACTAC-1     2 0.000
#> GACCAAACGTATCG-1     2 0.000
#> GACCCTACTAAAGG-1     1 0.000
#> GACCTAGACCTCAC-1     1 1.000
#> GACCTAGACGAGAG-1     1 0.000
#> GACCTCACAAGGTA-1     1 0.000
#> GACCTCACGTACGT-1     2 0.000
#> GACCTCTGCATCAG-1     1 0.000
#> GACGAACTCCCACT-1     1 0.000
#> GACGATTGCCAATG-1     1 0.000
#> GACGCCGACCTTCG-1     1 1.000
#> GACGCTCTCTCTCG-1     3 0.000
#> GACGGCACACGGGA-1     3 0.000
#> GACGGCACGAGATA-1     2 0.000
#> GACGTAACCTATGG-1     1 0.000
#> GACGTAACCTGTGA-1     1 0.000
#> GACGTAACTATGGC-1     1 0.000
#> GACGTATGTTGACG-1     1 0.000
#> GACGTATGTTTGCT-1     1 0.000
#> GACGTCCTACGGAG-1     1 0.249
#> GACGTCCTCTCAAG-1     2 0.000
#> GACGTCCTGATAAG-1     1 0.000
#> GACTACGATGGTCA-1     1 0.000
#> GACTCCTGCTCGCT-1     1 0.000
#> GACTCCTGGGTTAC-1     1 0.000
#> GACTCCTGTTATCC-1     1 1.000
#> GACTCCTGTTGGTG-1     2 0.000
#> GACTGAACCAATCG-1     2 0.000
#> GACTGATGTGATGC-1     1 0.000
#> GACTTTACATGCCA-1     1 0.000
#> GACTTTACGACAGG-1     1 0.000
#> GAGAAATGTTCTCA-1     1 0.000
#> GAGATAGAAAAAGC-1     2 0.000
#> GAGATCACGACAAA-1     2 0.000
#> GAGATGCTCTGGAT-1     3 0.249
#> GAGATGCTGAATGA-1     1 0.751
#> GAGCAGGATTCCCG-1     3 0.502
#> GAGCATACTTTGCT-1     2 0.000
#> GAGCGCACGCGTAT-1     2 0.000
#> GAGCGCACGGTGAG-1     1 0.249
#> GAGCGCTGAAGATG-1     3 0.000
#> GAGCGCTGTCTTAC-1     2 0.000
#> GAGCGGCTGGGAGT-1     1 0.000
#> GAGGACGACTCAGA-1     1 0.000
#> GAGGATCTGAAAGT-1     1 0.000
#> GAGGCAGACTTGCC-1     3 0.000
#> GAGGGAACACCAGT-1     1 0.751
#> GAGGGAACGAGGGT-1     3 1.000
#> GAGGGATGGGAAAT-1     1 0.502
#> GAGGGCCTTCACCC-1     1 0.747
#> GAGGGTGAAGAGTA-1     1 0.000
#> GAGGTACTACGGTT-1     1 0.000
#> GAGGTACTACTCAG-1     2 0.000
#> GAGGTACTGACACT-1     3 0.000
#> GAGGTACTGGGAGT-1     1 0.000
#> GAGGTACTTAGCGT-1     2 0.000
#> GAGGTGGAGTACGT-1     1 0.000
#> GAGGTGGATCCTCG-1     3 0.000
#> GAGGTTACTCGTTT-1     2 0.000
#> GAGGTTTGTAAGCC-1     2 0.000
#> GAGTCAACCATTCT-1     1 0.000
#> GAGTCAACGGGAGT-1     1 0.000
#> GAGTCTGATCGTGA-1     1 0.000
#> GAGTCTGATTTGGG-1     1 0.000
#> GAGTGACTCAGCTA-1     3 0.502
#> GAGTGACTCGGTAT-1     3 0.000
#> GAGTGACTCTTGCC-1     1 0.000
#> GAGTGACTGACTAC-1     1 0.000
#> GAGTGACTGTCTAG-1     1 0.000
#> GAGTGGGAGTCTTT-1     1 0.000
#> GAGTGGGATGCCCT-1     1 0.000
#> GAGTGGGATGCTGA-1     1 0.000
#> GAGTGTTGCTGTAG-1     1 0.000
#> GAGTGTTGTGGTCA-1     1 0.000
#> GAGTTGTGCATGGT-1     2 0.000
#> GAGTTGTGCTGAGT-1     3 0.000
#> GAGTTGTGGCGAGA-1     2 0.000
#> GAGTTGTGGTAGCT-1     3 0.000
#> GAGTTGTGTATGCG-1     2 0.000
#> GATAAGGAGAAACA-1     2 0.000
#> GATAAGGATTCACT-1     2 0.000
#> GATACTCTATCGGT-1     1 0.000
#> GATACTCTTACTTC-1     1 0.000
#> GATACTCTTGACTG-1     2 0.000
#> GATAGAGAAGGGTG-1     3 0.000
#> GATAGAGACTGTGA-1     1 0.000
#> GATAGAGATCACGA-1     2 0.000
#> GATAGCACCCATAG-1     1 0.000
#> GATAGCACGAAGGC-1     2 0.000
#> GATAGCACTTGTCT-1     1 0.000
#> GATATAACAAGGTA-1     1 0.000
#> GATATAACACGCAT-1     1 0.000
#> GATATATGCTGGAT-1     1 0.000
#> GATATATGTCCGTC-1     3 0.000
#> GATATATGTGGAGG-1     2 0.000
#> GATATCCTAGAAGT-1     1 0.000
#> GATATCCTCCCGTT-1     2 0.000
#> GATATTGACAGGAG-1     3 1.000
#> GATATTGACGAGTT-1     2 0.000
#> GATATTGAGCCAAT-1     1 0.000
#> GATCCCTGACCTTT-1     3 0.000
#> GATCCCTGTGTAGC-1     3 0.747
#> GATCCGCTGGTCAT-1     2 0.000
#> GATCGAACCGAGAG-1     1 0.253
#> GATCGATGACTAGC-1     1 0.000
#> GATCGATGGTAAAG-1     1 0.000
#> GATCGATGTAAGGA-1     2 0.000
#> GATCGTGACACTAG-1     1 0.000
#> GATCGTGATTCACT-1     1 0.000
#> GATCTACTGGTGAG-1     3 1.000
#> GATCTACTTTGCAG-1     1 0.000
#> GATCTTACACCCAA-1     2 0.000
#> GATCTTACCCTACC-1     1 0.000
#> GATCTTACGAATAG-1     2 0.000
#> GATCTTACGAGATA-1     2 0.000
#> GATGCAACTCCAGA-1     1 0.000
#> GATGCCCTACGTAC-1     1 0.000
#> GATGCCCTCTCATT-1     1 0.000
#> GATGCCCTGGCAAG-1     2 0.000
#> GATGCCCTTTTGCT-1     1 0.000
#> GATTACCTTGTTCT-1     1 0.000
#> GATTCGGAACGACT-1     1 0.000
#> GATTCGGACAGGAG-1     2 0.000
#> GATTCGGAGAAGGC-1     2 0.000
#> GATTCTTGATTCGG-1     2 0.000
#> GATTCTTGCCGATA-1     1 0.000
#> GATTCTTGCGAGTT-1     1 0.000
#> GATTGGACCCGTTC-1     1 0.000
#> GATTGGACGGTGTT-1     1 0.000
#> GATTGGACTTTCGT-1     1 0.000
#> GATTGGTGTGTCAG-1     1 0.000
#> GATTTAGACACTCC-1     2 0.000
#> GATTTAGACTAAGC-1     3 1.000
#> GATTTAGATTCGTT-1     1 1.000
#> GATTTGCTAACGAA-1     1 0.000
#> GATTTGCTAACGGG-1     2 0.000
#> GCAACCCTCCTCGT-1     2 0.000
#> GCAACTGATTGCGA-1     1 0.000
#> GCAAGACTACTGGT-1     1 1.000
#> GCAAGACTAGGTCT-1     1 0.000
#> GCAAGACTCCCTTG-1     1 0.000
#> GCAATCGACTGCAA-1     1 0.253
#> GCAATCGAGACGTT-1     2 0.000
#> GCAATCGATCCTTA-1     2 0.000
#> GCAATTCTCGTGTA-1     1 0.000
#> GCAATTCTTCTCCG-1     1 0.000
#> GCACAAACAATGCC-1     1 0.000
#> GCACAAACGGTACT-1     1 0.000
#> GCACAATGGTGCAT-1     2 0.000
#> GCACACCTGTGCTA-1     3 0.000
#> GCACCACTCATGAC-1     2 0.000
#> GCACCACTGTTTGG-1     2 0.249
#> GCACCACTTCCTTA-1     3 0.000
#> GCACCACTTTCGGA-1     2 0.000
#> GCACCTACGCGATT-1     1 0.000
#> GCACCTTGGCTGTA-1     1 0.000
#> GCACCTTGGGGAGT-1     2 0.000
#> GCACGGACCAGCTA-1     1 0.000
#> GCACGGTGACCTCC-1     1 0.000
#> GCACGGTGCTATGG-1     2 0.000
#> GCACTAGAACGGGA-1     1 0.000
#> GCACTAGAAGATGA-1     1 0.000
#> GCACTAGACCTTTA-1     2 0.000
#> GCACTAGACGTAAC-1     1 0.000
#> GCACTAGAGTCGTA-1     3 0.000
#> GCACTAGATGCAAC-1     1 0.000
#> GCACTGCTGAGGCA-1     1 0.000
#> GCAGATACAGCGTT-1     1 0.253
#> GCAGATACGACGGA-1     1 0.000
#> GCAGATACGCAGAG-1     1 0.000
#> GCAGCCGACAGTCA-1     1 0.000
#> GCAGCGTGCACTCC-1     1 0.000
#> GCAGCTCTCAATCG-1     1 0.000
#> GCAGCTCTGTTTCT-1     1 0.000
#> GCAGGGCTAAGAAC-1     1 0.000
#> GCAGGGCTAAGGGC-1     1 0.000
#> GCAGGGCTATCGAC-1     3 0.000
#> GCAGGGCTTGGGAG-1     3 0.249
#> GCAGTCCTAACTGC-1     1 0.000
#> GCAGTCCTCTCTTA-1     1 0.000
#> GCATCAGATGCGTA-1     1 1.000
#> GCATGTGACAAGCT-1     1 0.000
#> GCATTGGAGAAGGC-1     1 0.000
#> GCCAAAACGAGGCA-1     3 0.000
#> GCCAAATGATCGAC-1     1 0.000
#> GCCAACCTACGGTT-1     1 0.000
#> GCCAACCTCGCCTT-1     1 0.000
#> GCCACGGAGGCGAA-1     2 0.000
#> GCCACGGATACTGG-1     1 0.000
#> GCCACTACGTCTTT-1     1 0.000
#> GCCCAACTACCGAT-1     1 0.000
#> GCCCAACTATGGTC-1     3 0.498
#> GCCCATACAGCGTT-1     3 1.000
#> GCCGACGAACTCTT-1     2 0.000
#> GCCGAGTGCGTTGA-1     1 0.000
#> GCCGGAACGAACTC-1     3 0.502
#> GCCGGAACGTTCTT-1     3 0.000
#> GCCGGAACTGCACA-1     3 0.000
#> GCCGGAACTTACTC-1     1 0.000
#> GCCGTACTACCTGA-1     1 0.000
#> GCCGTACTGGCAAG-1     2 0.000
#> GCCTACACAGTTCG-1     3 0.000
#> GCCTACACCACTGA-1     2 0.000
#> GCCTACACCTTGAG-1     1 0.000
#> GCCTAGCTACGGAG-1     1 0.000
#> GCCTAGCTCTATTC-1     1 0.000
#> GCCTAGCTTCTCAT-1     1 0.000
#> GCCTAGCTTCTCTA-1     2 0.000
#> GCCTCAACCATGGT-1     1 0.000
#> GCCTCAACTCTTTG-1     3 0.000
#> GCCTCATGTCTTAC-1     1 0.502
#> GCCTGACTCTCAAG-1     2 0.000
#> GCGAAGGAACTCTT-1     1 1.000
#> GCGAAGGATGCCAA-1     1 0.000
#> GCGAGAGAGGGACA-1     1 0.000
#> GCGAGCACTGTCGA-1     1 0.000
#> GCGAGCACTTGACG-1     1 0.000
#> GCGAGCACTTGCTT-1     2 0.000
#> GCGATATGGTACGT-1     1 0.000
#> GCGATATGGTGTTG-1     1 0.000
#> GCGCACGAAGTCGT-1     1 0.000
#> GCGCACGACTTTAC-1     2 0.000
#> GCGCATCTAGGTCT-1     1 0.000
#> GCGCATCTGGTTAC-1     1 1.000
#> GCGCATCTTCGATG-1     1 0.000
#> GCGCATCTTGCTCC-1     3 0.000
#> GCGCATCTTTCTAC-1     1 0.000
#> GCGCGAACGTTCTT-1     1 0.000
#> GCGCGATGAACGGG-1     1 0.000
#> GCGCGATGGTGCAT-1     3 0.000
#> GCGGAGCTCCTGAA-1     1 0.000
#> GCGGCAACCCGATA-1     1 0.000
#> GCGGCAACGGAGGT-1     1 0.000
#> GCGGCAACTGTCGA-1     2 0.000
#> GCGTAAACACGGTT-1     2 0.000
#> GCGTAATGCACCAA-1     2 0.000
#> GCGTATGAACACCA-1     1 0.000
#> GCGTATGATGAGAA-1     2 0.000
#> GCTACAGAAAGGTA-1     1 0.000
#> GCTACAGAATCTTC-1     1 0.000
#> GCTACCTGAGAAGT-1     2 0.000
#> GCTACCTGATCACG-1     1 0.000
#> GCTACGCTAGAATG-1     1 0.000
#> GCTACGCTAGCTAC-1     1 0.000
#> GCTACGCTCCCTAC-1     1 0.000
#> GCTAGAACAGAGGC-1     1 0.000
#> GCTAGAACGGATCT-1     1 0.000
#> GCTAGAACTCCCGT-1     1 0.000
#> GCTAGATGAGCTCA-1     2 0.000
#> GCTAGATGGCGATT-1     3 0.751
#> GCTATACTAAGGCG-1     1 0.000
#> GCTATACTAGCGTT-1     3 0.000
#> GCTATACTCTCTTA-1     1 0.000
#> GCTATACTGGACGA-1     1 0.000
#> GCTCAAGAACCATG-1     2 0.000
#> GCTCAAGAAGTCAC-1     2 0.000
#> GCTCAGCTGTCTAG-1     1 0.000
#> GCTCCATGAGAAGT-1     3 0.000
#> GCTCCATGCCGAAT-1     1 0.000
#> GCTCGACTCTAGTG-1     2 0.000
#> GCTGATGAGGTATC-1     2 0.000
#> GCTTAACTACAGTC-1     2 0.000
#> GCTTAACTACTGGT-1     3 0.000
#> GCTTAACTGCTGAT-1     1 0.000
#> GCTTAACTTAGACC-1     2 0.000
#> GCTTAACTTCAGTG-1     1 0.000
#> GGAACACTCACTTT-1     2 0.000
#> GGAACACTTCAGAC-1     3 0.000
#> GGAACTACTACTTC-1     1 0.000
#> GGAACTTGAAGGTA-1     2 0.000
#> GGAACTTGAGAATG-1     1 0.000
#> GGAACTTGCTCCAC-1     2 0.000
#> GGAACTTGGGTAGG-1     1 0.000
#> GGAAGGACATCGGT-1     2 0.000
#> GGAAGGACCACTAG-1     1 0.249
#> GGAAGGACGAGGGT-1     1 0.000
#> GGAAGGACGCGAAG-1     1 1.000
#> GGAAGGTGGCGAGA-1     3 0.000
#> GGAATCTGAAGGGC-1     1 0.000
#> GGAATCTGAGGAGC-1     1 0.502
#> GGAATCTGCTTAGG-1     1 0.000
#> GGAATCTGCTTGTT-1     2 0.000
#> GGAATCTGGGAGGT-1     1 0.000
#> GGAATGCTTTCTAC-1     1 0.000
#> GGACAGGAAAGGGC-1     1 0.249
#> GGACAGGAGTGCTA-1     1 0.000
#> GGACAGGATCTCGC-1     1 0.000
#> GGACCCGAAGCTAC-1     2 0.000
#> GGACCGTGCTTACT-1     2 0.000
#> GGACCGTGGGAACG-1     2 0.000
#> GGACCGTGTAACGC-1     1 0.000
#> GGACCTCTGTAAGA-1     2 0.000
#> GGACCTCTTTTCTG-1     3 0.000
#> GGACGAGAGTGTCA-1     2 0.000
#> GGACGCTGACGCAT-1     3 1.000
#> GGACGCTGCTAGCA-1     1 0.000
#> GGACGCTGTCCTCG-1     3 0.000
#> GGAGAGACGTGAGG-1     1 0.000
#> GGAGCAGATTCAGG-1     1 0.000
#> GGAGCCACCTTCTA-1     1 0.000
#> GGAGCGCTACGCAT-1     2 0.000
#> GGAGCGCTCCGAAT-1     1 0.000
#> GGAGGATGCCACCT-1     1 0.000
#> GGAGGATGGTTGAC-1     2 0.000
#> GGAGGATGTCAGTG-1     2 0.000
#> GGAGGCCTCGTTGA-1     3 0.000
#> GGAGGCCTTTCTTG-1     1 0.000
#> GGAGGTGATACGCA-1     1 0.000
#> GGAGGTGATCGCTC-1     1 0.000
#> GGATACTGCAGCTA-1     1 0.000
#> GGATACTGTCTAGG-1     1 0.000
#> GGATAGCTCGTCTC-1     1 0.000
#> GGATAGCTCTGAAC-1     3 0.751
#> GGATGTACCAAAGA-1     1 0.000
#> GGATGTACGCGAAG-1     1 0.000
#> GGATGTACGTCTTT-1     2 0.498
#> GGATGTACGTGTCA-1     3 0.751
#> GGATTTCTAGGTTC-1     1 0.000
#> GGATTTCTTTGTCT-1     2 0.000
#> GGCAAGGAAAAAGC-1     3 0.000
#> GGCAAGGAAGAAGT-1     1 0.000
#> GGCAAGGACTTGGA-1     2 0.000
#> GGCAAGGAGGACTT-1     1 0.000
#> GGCAATACGCTAAC-1     1 0.000
#> GGCAATACGGCATT-1     1 1.000
#> GGCAATACGTTTCT-1     1 0.000
#> GGCACGTGGCTTAG-1     2 0.000
#> GGCACTCTTTTGTC-1     1 0.000
#> GGCATATGCTTATC-1     3 0.000
#> GGCATATGGGGAGT-1     3 0.000
#> GGCATATGTGTGAC-1     1 0.249
#> GGCCACGACAGAGG-1     1 0.249
#> GGCCAGACTGGTTG-1     1 0.000
#> GGCCCAGAAAGTAG-1     2 0.000
#> GGCCGAACAACGAA-1     1 0.000
#> GGCCGAACGCAGAG-1     1 0.000
#> GGCCGAACGTAGGG-1     1 0.000
#> GGCCGAACTCTAGG-1     3 0.000
#> GGCCGATGCAGGAG-1     1 0.000
#> GGCCGATGCCGAAT-1     1 0.000
#> GGCCGATGTACTCT-1     1 0.000
#> GGCGACACTGCCCT-1     3 1.000
#> GGCGACTGCGTAAC-1     1 0.000
#> GGCGCATGCCTAAG-1     2 0.000
#> GGCGCATGCTCCAC-1     1 0.000
#> GGCGCATGTGGAAA-1     1 0.000
#> GGCGGACTAGAGGC-1     1 1.000
#> GGCGGACTAGGAGC-1     3 0.751
#> GGCGGACTCTGACA-1     1 0.000
#> GGCGGACTCTTGGA-1     3 0.000
#> GGCGGACTTACTGG-1     1 0.000
#> GGCGGACTTGAACC-1     1 0.000
#> GGCTAAACACCTGA-1     3 0.000
#> GGCTAAACTCTTAC-1     1 0.000
#> GGCTAATGAGCACT-1     3 0.000
#> GGCTAATGGTCTAG-1     1 0.000
#> GGCTCACTACTCAG-1     2 0.000
#> GGGAACGAAGCTCA-1     2 0.000
#> GGGAACGACACAAC-1     1 0.000
#> GGGAACGAGTGTCA-1     2 0.000
#> GGGAAGTGTTGAGC-1     2 0.000
#> GGGACCACACGTTG-1     3 0.000
#> GGGACCACAGAACA-1     1 0.000
#> GGGACCACGAATAG-1     1 0.000
#> GGGACCACGTCATG-1     1 0.000
#> GGGACCACTCAAGC-1     1 0.000
#> GGGACCACTCGTGA-1     1 0.000
#> GGGACCACTGCATG-1     1 0.000
#> GGGACCTGACCCTC-1     2 0.000
#> GGGACCTGCTTGCC-1     1 0.000
#> GGGACCTGTGGAGG-1     1 0.000
#> GGGATGGACGACAT-1     1 0.000
#> GGGATGGATACTTC-1     1 0.249
#> GGGATGGATGGTTG-1     2 0.000
#> GGGATTACGTCTAG-1     1 0.000
#> GGGCAAGATGCATG-1     2 0.000
#> GGGCACACGGTGAG-1     2 0.000
#> GGGCACACGTTGCA-1     1 0.000
#> GGGCAGCTTGGGAG-1     1 1.000
#> GGGCAGCTTTTCTG-1     1 0.000
#> GGGCCAACCTTGGA-1     2 0.249
#> GGGCCAACGCGTTA-1     1 0.000
#> GGGCCAACTACGCA-1     2 0.000
#> GGGCCAACTCCAAG-1     1 0.000
#> GGGCCATGATGGTC-1     1 0.000
#> GGGCCATGTTGACG-1     1 1.000
#> GGGTAACTCAGCTA-1     1 0.000
#> GGGTAACTCTAGTG-1     1 0.000
#> GGGTAACTCTGGAT-1     1 0.000
#> GGGTTAACGTGCAT-1     3 0.000
#> GGTAAAGAGCTAAC-1     3 0.000
#> GGTACAACTGCAAC-1     1 0.000
#> GGTACATGAAAGCA-1     1 0.000
#> GGTACATGAGCTCA-1     1 0.751
#> GGTACATGCGGTAT-1     1 0.000
#> GGTACATGGTTACG-1     1 0.000
#> GGTACATGTGGGAG-1     1 0.000
#> GGTACTGAACTCTT-1     2 0.000
#> GGTAGTACACCACA-1     1 0.249
#> GGTAGTACACTAGC-1     2 0.000
#> GGTAGTACCCTGTC-1     1 0.000
#> GGTAGTACGCCATA-1     2 0.000
#> GGTAGTACTGTCTT-1     1 0.751
#> GGTATCGAGACAAA-1     1 1.000
#> GGTATCGATGAACC-1     1 0.000
#> GGTCAAACCAAAGA-1     1 0.000
#> GGTCTAGAGAAACA-1     2 0.000
#> GGTCTAGATAGCGT-1     2 0.000
#> GGTGATACCGACTA-1     1 0.000
#> GGTGATACGACTAC-1     2 0.000
#> GGTGATACTGTTTC-1     1 0.000
#> GGTGGAGAAACGGG-1     3 0.000
#> GGTGGAGAAGTAGA-1     1 0.000
#> GGTGGAGACAGATC-1     3 0.000
#> GGTGGAGATCGATG-1     1 0.000
#> GGTGGAGATCTCTA-1     2 0.000
#> GGTGGAGATTACTC-1     3 0.000
#> GGTTTACTACGCAT-1     3 0.000
#> GTAACGTGACCTCC-1     2 0.000
#> GTAACGTGATCGGT-1     1 0.000
#> GTAACGTGCAGCTA-1     1 0.000
#> GTAACGTGGTTGAC-1     1 0.000
#> GTAAGCACAACGGG-1     1 0.000
#> GTAAGCACTCATTC-1     1 0.000
#> GTAAGCTGGTACCA-1     2 0.000
#> GTAATAACCTTCTA-1     2 0.000
#> GTAATAACGTTGTG-1     1 0.000
#> GTACCCTGACAGTC-1     2 0.000
#> GTACCCTGGAGCTT-1     1 0.000
#> GTACCCTGTCCTTA-1     3 0.000
#> GTACCCTGTGAACC-1     1 0.000
#> GTACGTGAACGTTG-1     3 1.000
#> GTACTTTGTCGACA-1     1 0.751
#> GTAGACTGAGATGA-1     2 0.000
#> GTAGACTGTATTCC-1     1 0.000
#> GTAGCAACAGTCGT-1     2 0.000
#> GTAGCAACCATTTC-1     1 0.249
#> GTAGCAACGGTAGG-1     2 0.000
#> GTAGCATGCACTCC-1     1 0.000
#> GTAGCATGTAAGCC-1     2 0.000
#> GTAGCCCTGACGTT-1     1 0.000
#> GTAGCTGAAGCTAC-1     2 0.000
#> GTAGCTGAATTCGG-1     1 0.000
#> GTAGGTACACGGGA-1     2 0.000
#> GTAGTGACCTCATT-1     1 0.000
#> GTAGTGTGAGCGGA-1     3 0.000
#> GTAGTGTGAGGCGA-1     2 0.000
#> GTAGTGTGTGGTTG-1     1 0.000
#> GTATCACTGGTAGG-1     2 0.000
#> GTATCTACAGAAGT-1     3 0.000
#> GTATCTACGACGAG-1     3 0.249
#> GTATCTACGTTACG-1     1 0.000
#> GTATTAGAAACAGA-1     3 0.000
#> GTATTAGAGGTCTA-1     1 0.000
#> GTATTCACACAGCT-1     1 0.000
#> GTATTCACGGGTGA-1     3 0.000
#> GTCAACGACACTGA-1     1 0.000
#> GTCAACGAGTGTAC-1     2 0.000
#> GTCAATCTACACCA-1     1 0.747
#> GTCAATCTGTAGCT-1     3 0.000
#> GTCAATCTTGTGGT-1     1 0.000
#> GTCACCTGCCTCCA-1     1 0.000
#> GTCACCTGTCCCGT-1     1 0.000
#> GTCATACTAATCGC-1     1 0.000
#> GTCATACTGCGATT-1     3 0.000
#> GTCATACTTCGCCT-1     3 0.000
#> GTCATACTTTACCT-1     3 0.498
#> GTCATACTTTGACG-1     1 0.000
#> GTCCAAGAAAAACG-1     1 0.000
#> GTCCACTGACCTCC-1     1 0.000
#> GTCCACTGGGTACT-1     2 0.000
#> GTCCAGCTACGGGA-1     1 0.000
#> GTCCCATGTGGTGT-1     2 0.000
#> GTCGAATGAAGGCG-1     2 0.000
#> GTCGACCTGAATGA-1     3 0.000
#> GTCGACCTGTTCAG-1     1 0.000
#> GTCGCACTTGAGAA-1     1 0.000
#> GTCTAACTGGTCTA-1     2 0.000
#> GTCTAGGAGCTTCC-1     2 0.000
#> GTGAACACACTCTT-1     1 0.000
#> GTGAACACTCAGGT-1     1 0.000
#> GTGACCCTTAAGCC-1     1 0.000
#> GTGATGACAAGTGA-1     1 0.000
#> GTGATGACCTGAGT-1     1 0.000
#> GTGATGACGGTTTG-1     1 0.253
#> GTGATTCTCATTTC-1     1 0.000
#> GTGATTCTCTCTCG-1     2 0.000
#> GTGATTCTGGTTCA-1     3 0.000
#> GTGATTCTGTCGAT-1     1 0.000
#> GTGATTCTTAGCGT-1     1 0.000
#> GTGCCACTCAGGAG-1     1 0.000
#> GTGGATTGCACTAG-1     2 0.000
#> GTGGATTGCGGAGA-1     1 0.000
#> GTGGATTGTAACGC-1     1 0.000
#> GTGTACGATCAGTG-1     1 0.000
#> GTGTAGTGGGTACT-1     1 0.000
#> GTGTATCTAGCCTA-1     1 0.000
#> GTGTATCTAGTAGA-1     3 0.498
#> GTGTATCTGTTACG-1     1 0.000
#> GTGTCAGAAGCGTT-1     3 0.000
#> GTTAAAACCGAGAG-1     3 0.000
#> GTTAAATGCTCGAA-1     1 0.000
#> GTTAAATGTCGACA-1     1 0.000
#> GTTAACCTAGCTAC-1     1 0.000
#> GTTAACCTTGCTTT-1     2 0.000
#> GTTAGGTGCACTCC-1     1 0.000
#> GTTAGGTGCCAGTA-1     2 0.000
#> GTTAGGTGCCCAAA-1     2 0.000
#> GTTAGGTGGAACTC-1     1 0.000
#> GTTAGTCTAAGAAC-1     1 1.000
#> GTTATAGAGGACAG-1     1 0.000
#> GTTATGCTTTCATC-1     1 0.000
#> GTTCAACTGGGACA-1     3 0.000
#> GTTCAACTTATGCG-1     1 0.000
#> GTTGACGAGCCCTT-1     3 0.000
#> GTTGACGATATCGG-1     3 0.000
#> GTTGAGTGGTCTTT-1     2 0.000
#> GTTGAGTGTGCTTT-1     1 0.000
#> GTTGATCTGGGACA-1     1 0.000
#> GTTGATCTTTTCAC-1     3 0.000
#> GTTGGATGTTTACC-1     2 0.000
#> GTTGTACTATTCCT-1     2 0.000
#> GTTGTACTTTTGGG-1     1 0.000
#> GTTTAAGACCATGA-1     2 0.000
#> GTTTAAGACTGTCC-1     3 0.000
#> TAAACAACCAACCA-1     1 0.000
#> TAAACAACGAATCC-1     1 0.000
#> TAAAGACTCAGGAG-1     1 0.000
#> TAAATCGATGAGGG-1     1 0.000
#> TAACAATGTGCCCT-1     1 0.000
#> TAACACCTTCGCTC-1     2 0.000
#> TAACACCTTCGTAG-1     2 0.000
#> TAACACCTTGTTTC-1     3 0.000
#> TAACATGACACTAG-1     1 0.000
#> TAACCGGACTTACT-1     1 0.000
#> TAACGTCTCAACCA-1     2 0.000
#> TAACGTCTCATTGG-1     1 0.000
#> TAACTAGAATTTCC-1     1 0.000
#> TAACTAGACTTAGG-1     1 0.000
#> TAACTAGATCTGGA-1     1 0.000
#> TAACTCACGAGGAC-1     2 0.000
#> TAACTCACGTACAC-1     1 0.000
#> TAACTCACGTATCG-1     2 0.000
#> TAACTCACTCTACT-1     3 0.000
#> TAAGAACTGTGTCA-1     2 0.000
#> TAAGAGGACTAAGC-1     1 0.000
#> TAAGAGGACTTGTT-1     3 0.000
#> TAAGATACGGTTCA-1     2 0.000
#> TAAGATTGCGTAGT-1     1 0.000
#> TAAGATTGTTGCTT-1     1 0.502
#> TAAGCGTGAGGTTC-1     2 0.000
#> TAAGCGTGGACAAA-1     2 0.000
#> TAAGCGTGGGAAAT-1     1 0.000
#> TAAGCGTGTGCTCC-1     2 0.000
#> TAAGGCTGCCATGA-1     1 0.000
#> TAAGGCTGCTGCTC-1     1 0.000
#> TAAGGCTGTCTCGC-1     2 0.000
#> TAAGGGCTGCTGTA-1     3 0.000
#> TAAGGGCTTTACTC-1     1 0.000
#> TAAGTAACCGAGAG-1     1 0.000
#> TAAGTAACCTCCAC-1     1 0.000
#> TAAGTAACCTGTAG-1     1 0.000
#> TAAGTAACTTGTCT-1     1 0.000
#> TAATGATGAGCGGA-1     1 0.000
#> TAATGCCTCATGAC-1     1 0.000
#> TAATGCCTCGTCTC-1     3 0.000
#> TAATGTGAAGATGA-1     1 0.000
#> TAATGTGACTGCAA-1     2 0.000
#> TAATGTGATTACTC-1     1 0.000
#> TACAAATGGGTACT-1     1 0.000
#> TACAATGAAAACAG-1     2 0.000
#> TACAATGACTTAGG-1     1 0.000
#> TACAATGATGCTAG-1     1 1.000
#> TACACACTCACACA-1     1 0.000
#> TACACACTCTTACT-1     3 1.000
#> TACATAGAACGCAT-1     3 1.000
#> TACATCACACGGGA-1     1 0.000
#> TACATCACCTGTTT-1     2 0.000
#> TACATCACGCTAAC-1     1 0.000
#> TACATCACTGAACC-1     2 0.000
#> TACCATTGAGGTTC-1     1 0.000
#> TACCATTGCGGGAA-1     2 0.000
#> TACCATTGGGGATG-1     2 0.000
#> TACCATTGTGAGGG-1     2 0.000
#> TACCGGCTGTTGGT-1     1 0.000
#> TACGAGTGATCTCT-1     1 0.000
#> TACGAGTGATGCTG-1     2 0.000
#> TACGAGTGCGGAGA-1     1 1.000
#> TACGAGTGGTTGGT-1     1 0.000
#> TACGATCTAGTGTC-1     1 0.000
#> TACGATCTCACTGA-1     2 0.000
#> TACGATCTTACGAC-1     3 0.253
#> TACGCAGAGAATCC-1     3 0.751
#> TACGCCACATTCCT-1     1 0.000
#> TACGCCACTCCCAC-1     2 0.000
#> TACGCCACTCCGAA-1     1 0.000
#> TACGGAACGCGTTA-1     1 0.000
#> TACGGCCTGGGACA-1     3 0.000
#> TACGTACTACGGAG-1     1 0.000
#> TACGTACTCAGTTG-1     1 0.000
#> TACGTACTCCCGTT-1     1 0.000
#> TACGTTACAGAAGT-1     1 0.000
#> TACGTTACCAAGCT-1     2 0.000
#> TACTAAGAAAGGTA-1     1 0.000
#> TACTAAGAATCACG-1     1 0.000
#> TACTAAGATGATGC-1     2 0.000
#> TACTAAGATTGCGA-1     1 0.000
#> TACTACACGAGAGC-1     1 0.000
#> TACTACACTTACCT-1     1 0.000
#> TACTACTGAACCTG-1     2 0.000
#> TACTACTGATGTCG-1     3 0.000
#> TACTACTGATTCTC-1     1 0.000
#> TACTACTGTATGGC-1     1 0.000
#> TACTCAACGGTCTA-1     2 0.000
#> TACTCAACTGCTAG-1     1 0.000
#> TACTCCCTCAGTTG-1     1 0.000
#> TACTCTGAATCGAC-1     3 0.000
#> TACTCTGACGAGTT-1     1 0.000
#> TACTCTGATTGACG-1     1 0.502
#> TACTGGGATCGATG-1     1 0.000
#> TACTGTTGAAAGCA-1     1 0.000
#> TACTGTTGAGGCGA-1     3 0.000
#> TACTGTTGCTGAAC-1     1 0.498
#> TACTTGACTCCTCG-1     3 0.751
#> TACTTGACTGGTGT-1     1 0.000
#> TACTTTCTTTTGGG-1     1 0.751
#> TAGAAACTAATCGC-1     1 0.000
#> TAGAAACTGCTTCC-1     2 0.000
#> TAGAAACTGGGATG-1     3 0.000
#> TAGAATTGCGACAT-1     1 0.000
#> TAGAATTGTATCGG-1     1 0.000
#> TAGACGTGCTTGAG-1     1 0.000
#> TAGACGTGTCGCTC-1     1 0.000
#> TAGAGCACCTTACT-1     1 0.000
#> TAGATTGACTTGTT-1     1 0.000
#> TAGATTGAGGCATT-1     1 1.000
#> TAGCATCTCAGCTA-1     3 0.000
#> TAGCATCTCCCTCA-1     1 0.000
#> TAGCATCTGCTGTA-1     2 0.000
#> TAGCATCTGGGACA-1     1 0.000
#> TAGCATCTTGTCGA-1     1 0.000
#> TAGCCCACAAAAGC-1     1 0.000
#> TAGCCCACAGCCAT-1     3 0.000
#> TAGCCCACAGCTAC-1     3 0.000
#> TAGCCCACCCACAA-1     1 0.000
#> TAGCCCTGCGGAGA-1     1 0.000
#> TAGCCGCTTACGAC-1     1 0.000
#> TAGCCGCTTACTTC-1     3 0.000
#> TAGCCGCTTTCCAT-1     2 0.000
#> TAGCTACTGAATAG-1     1 0.000
#> TAGCTACTGTAGCT-1     1 0.000
#> TAGCTACTTTTGCT-1     1 0.249
#> TAGGACTGTGCTGA-1     1 1.000
#> TAGGAGCTAAGGCG-1     1 0.000
#> TAGGAGCTGAGGGT-1     1 0.000
#> TAGGAGCTTGCATG-1     1 0.000
#> TAGGCAACCGTCTC-1     1 0.000
#> TAGGCATGCTCTCG-1     3 0.249
#> TAGGCATGGCGAGA-1     3 0.249
#> TAGGCTGATGCCTC-1     2 0.000
#> TAGGGACTGAACTC-1     3 0.000
#> TAGGTCGACACTGA-1     1 0.000
#> TAGGTCGAGGATCT-1     1 0.000
#> TAGGTGACACACTG-1     1 0.000
#> TAGGTGACACGTTG-1     1 0.000
#> TAGGTGTGTTCTGT-1     3 0.751
#> TAGGTTCTGAAGGC-1     1 0.000
#> TAGGTTCTTCTTAC-1     2 0.000
#> TAGGTTCTTGCTGA-1     2 0.000
#> TAGTAAACCTCGCT-1     1 0.000
#> TAGTAAACGTCACA-1     1 0.000
#> TAGTAATGAGATCC-1     1 0.000
#> TAGTACCTAAGAAC-1     2 0.000
#> TAGTATGATCTTAC-1     1 0.000
#> TAGTATGATTCTCA-1     1 0.000
#> TAGTCTTGGCTGTA-1     1 0.000
#> TAGTCTTGGGACTT-1     1 0.751
#> TAGTCTTGTGGAAA-1     3 0.000
#> TAGTGGTGAAGTGA-1     3 0.000
#> TAGTTAGAACCACA-1     3 0.000
#> TAGTTAGATGAACC-1     1 0.000
#> TATAAGACAACAGA-1     3 1.000
#> TATAAGACAGCTCA-1     2 0.000
#> TATAAGTGACACCA-1     2 0.000
#> TATAAGTGTATCGG-1     2 0.000
#> TATAAGTGTGGTGT-1     2 0.000
#> TATACAGAACCCTC-1     3 0.751
#> TATACAGAAGAACA-1     1 0.000
#> TATACAGATCCAGA-1     1 0.000
#> TATACCACCTGATG-1     1 0.000
#> TATACGCTACCAAC-1     1 0.000
#> TATAGATGGACGGA-1     1 0.000
#> TATAGATGTTCCGC-1     2 0.000
#> TATCCAACCAGCTA-1     2 0.000
#> TATCCAACTCTCTA-1     3 0.498
#> TATCGACTACTAGC-1     1 1.000
#> TATCGACTCGATAC-1     2 0.000
#> TATCGTACAGATGA-1     3 1.000
#> TATCGTACATTCCT-1     2 0.000
#> TATCTCGAGAGATA-1     1 0.000
#> TATCTGACAGGTTC-1     3 0.000
#> TATCTGACTGTTTC-1     1 0.000
#> TATCTTCTAAACAG-1     1 0.000
#> TATGAATGGAGGAC-1     3 0.000
#> TATGAATGTTTGCT-1     2 0.000
#> TATGCGGATAACCG-1     1 1.000
#> TATGGGTGCATCAG-1     3 0.000
#> TATGGGTGCTAGCA-1     1 0.000
#> TATGGTCTCTACCC-1     1 0.000
#> TATGTCACGGAACG-1     1 0.000
#> TATGTCACTAACCG-1     2 0.000
#> TATGTCACTTCTCA-1     1 0.000
#> TATGTGCTCCGATA-1     2 0.000
#> TATGTGCTGGATTC-1     1 0.000
#> TATTGCTGAAGAAC-1     2 0.000
#> TATTGCTGCCGTTC-1     1 0.000
#> TATTGCTGTCTGGA-1     1 0.000
#> TATTGCTGTGCACA-1     1 1.000
#> TATTTCCTATTGGC-1     2 0.000
#> TATTTCCTGGAGGT-1     3 0.000
#> TATTTCCTGGTGTT-1     1 0.000
#> TCAACACTGTTTGG-1     3 0.000
#> TCAAGGACAGCGTT-1     1 0.000
#> TCAAGGACATTCTC-1     3 0.000
#> TCAAGGACGGTGTT-1     2 0.000
#> TCAATCACACTCTT-1     3 0.000
#> TCAATCACAGTCGT-1     2 0.000
#> TCACAACTATGTGC-1     1 0.000
#> TCACAACTTTGCTT-1     2 0.000
#> TCACATACACTTTC-1     1 0.249
#> TCACATACAGGGTG-1     1 0.000
#> TCACCCGAGACGGA-1     2 0.000
#> TCACCGTGCTCGCT-1     2 0.000
#> TCACCTCTACGACT-1     3 0.000
#> TCACCTCTTCCAAG-1     2 0.000
#> TCACGAGAGGAGGT-1     1 0.000
#> TCACTATGGGGCAA-1     3 0.751
#> TCACTATGGTTGTG-1     1 0.000
#> TCAGACGACGCTAA-1     1 0.000
#> TCAGACGACGTTAG-1     3 0.000
#> TCAGAGACTCCAGA-1     1 0.000
#> TCAGCAGACTCCAC-1     1 0.000
#> TCAGCGCTCTAGTG-1     3 0.502
#> TCAGCGCTGGATCT-1     1 0.000
#> TCAGCGCTGGTATC-1     3 1.000
#> TCAGGATGAAGTAG-1     1 0.000
#> TCAGGATGCCTTTA-1     2 0.000
#> TCAGTGGAAGATCC-1     3 0.000
#> TCAGTTACCTACGA-1     2 0.000
#> TCAGTTACTAGAAG-1     1 0.000
#> TCATCAACCCGATA-1     1 0.000
#> TCATCAACTGTTCT-1     2 0.000
#> TCATCATGCAGTTG-1     1 0.000
#> TCATCCCTTACTGG-1     1 0.000
#> TCATTCGATACAGC-1     2 0.000
#> TCCACGTGGAAACA-1     1 0.000
#> TCCACTCTACACTG-1     1 0.751
#> TCCACTCTGAGCTT-1     2 0.000
#> TCCACTCTTACTTC-1     1 0.000
#> TCCATAACAAAGTG-1     1 0.000
#> TCCATAACCGTAGT-1     1 0.000
#> TCCATAACGATGAA-1     1 0.000
#> TCCATAACTACGCA-1     1 0.000
#> TCCATCCTCCCTAC-1     3 0.000
#> TCCCACGATCATTC-1     1 0.000
#> TCCCATCTCAAAGA-1     2 0.000
#> TCCCGAACACAGTC-1     3 0.000
#> TCCCGAACTTCGCC-1     2 0.000
#> TCCCGATGAGATCC-1     1 0.000
#> TCCCGATGCCTGAA-1     2 0.000
#> TCCCTACTCAACTG-1     1 0.000
#> TCCGAAGACAATCG-1     2 0.000
#> TCCGAAGACGTTAG-1     1 0.000
#> TCCGGACTGAGGTG-1     1 0.000
#> TCCGGACTGTACGT-1     3 0.751
#> TCCTAAACATCGAC-1     1 0.000
#> TCCTAAACCGAGAG-1     1 0.000
#> TCCTAAACCGCATA-1     3 0.000
#> TCCTAATGGTTTGG-1     3 0.000
#> TCCTACCTGTCGTA-1     1 0.000
#> TCCTATGAAAAGCA-1     3 0.000
#> TCGAATCTCTGGTA-1     3 0.502
#> TCGACCTGCCGATA-1     2 0.000
#> TCGACGCTTCTATC-1     2 0.000
#> TCGACGCTTTGACG-1     1 0.000
#> TCGAGAACGACAGG-1     1 0.000
#> TCGAGAACGTTAGC-1     3 1.000
#> TCGAGCCTATCAGC-1     1 0.000
#> TCGAGCCTGCGAGA-1     1 0.502
#> TCGAGCCTTGTGAC-1     1 0.000
#> TCGATACTATTCCT-1     1 1.000
#> TCGATACTTGCACA-1     1 0.000
#> TCGATTTGATGCCA-1     2 0.000
#> TCGATTTGCACTCC-1     1 0.000
#> TCGATTTGCAGCTA-1     3 0.000
#> TCGATTTGCCTACC-1     2 0.000
#> TCGATTTGTCGTGA-1     1 0.000
#> TCGCAGCTAGATCC-1     1 0.253
#> TCGCCATGAGACTC-1     1 0.000
#> TCGCCATGTGGTCA-1     1 0.000
#> TCGGACCTAACAGA-1     1 0.000
#> TCGGACCTATAAGG-1     1 0.249
#> TCGGACCTGTACAC-1     1 0.000
#> TCGGTAGAGTAGGG-1     1 0.000
#> TCGGTAGATCCCAC-1     1 0.000
#> TCGTAGGATCGACA-1     1 0.000
#> TCGTTATGGACAAA-1     1 0.000
#> TCTAACACCAGTTG-1     3 0.000
#> TCTAACACGAGCAG-1     2 0.000
#> TCTAACTGAACCAC-1     1 0.000
#> TCTAAGCTAATGCC-1     1 0.000
#> TCTAAGCTTAGTCG-1     3 0.000
#> TCTAAGCTTCTAGG-1     2 0.000
#> TCTAAGCTTGTTCT-1     2 0.000
#> TCTAAGCTTTCGCC-1     1 0.000
#> TCTACAACGACTAC-1     2 0.000
#> TCTAGACTTAGAAG-1     2 0.000
#> TCTAGTTGCACCAA-1     2 0.000
#> TCTATGTGAAGAGT-1     2 0.000
#> TCTATGTGAGTCTG-1     3 1.000
#> TCTCAAACCTAAGC-1     1 0.000
#> TCTCTAGAATTTCC-1     1 0.000
#> TCTGATACACGTGT-1     1 0.000
#> TCTGATACTCGCCT-1     1 0.000
#> TCTTACGAACCTGA-1     2 0.000
#> TCTTCAGAGCTACA-1     2 0.000
#> TCTTGATGCGGAGA-1     3 1.000
#> TGAAATTGGTGAGG-1     2 0.000
#> TGAACCGAAAACGA-1     1 0.000
#> TGAACCGACTACTT-1     2 0.000
#> TGAACCGATTCGGA-1     2 0.000
#> TGAAGCACTCACGA-1     1 1.000
#> TGAAGCTGAACGAA-1     1 0.000
#> TGAAGCTGCATGGT-1     1 0.000
#> TGAAGCTGCGTAAC-1     1 0.000
#> TGAATAACCACTTT-1     1 0.000
#> TGAATAACTCCCAC-1     3 0.000
#> TGACACGACCTTAT-1     1 0.000
#> TGACCAGACAACCA-1     1 0.000
#> TGACCAGAGGATTC-1     1 0.000
#> TGACCGCTAAAAGC-1     1 0.000
#> TGACCGCTCTGCAA-1     1 0.000
#> TGACGATGCAAAGA-1     2 0.000
#> TGACGCCTGTACCA-1     1 1.000
#> TGACGCCTTTACTC-1     3 0.000
#> TGACTGGAAGAGAT-1     2 0.000
#> TGACTGGACCGTAA-1     1 0.502
#> TGACTGGACGCAAT-1     1 0.000
#> TGACTGGAGGACAG-1     1 0.000
#> TGACTGGATTCTCA-1     1 0.000
#> TGACTTACACACCA-1     1 0.000
#> TGACTTACAGTCTG-1     2 0.000
#> TGACTTTGCGCATA-1     1 0.000
#> TGACTTTGTTTGTC-1     1 0.249
#> TGAGACACAAGGTA-1     1 0.000
#> TGAGACACTCAAGC-1     1 1.000
#> TGAGCTGAATGCTG-1     2 0.000
#> TGAGCTGACTGGAT-1     2 0.000
#> TGAGCTGATGCTAG-1     2 0.000
#> TGAGGACTCTCATT-1     2 0.000
#> TGAGGACTTCATTC-1     1 0.000
#> TGAGGTACGAACCT-1     2 0.000
#> TGAGTCGAGTTACG-1     1 0.000
#> TGAGTGACTGAGCT-1     1 0.000
#> TGATAAACGAATCC-1     1 0.000
#> TGATAAACTCCGTC-1     3 0.000
#> TGATAAACTTTCAC-1     1 0.000
#> TGATACCTCACTAG-1     2 0.000
#> TGATACCTGTTGGT-1     1 0.000
#> TGATACCTTATGCG-1     1 0.000
#> TGATACCTTGAAGA-1     1 0.000
#> TGATATGAACCTTT-1     1 0.000
#> TGATCACTAGCATC-1     3 0.751
#> TGATCACTCTCGCT-1     1 0.000
#> TGATCACTTCTACT-1     1 0.000
#> TGATCGGACTGACA-1     2 0.000
#> TGATCGGAGGAGCA-1     1 0.000
#> TGATCGGATATGCG-1     2 0.000
#> TGATTAGACATTGG-1     1 0.000
#> TGATTAGATGACTG-1     1 0.000
#> TGATTAGATGCTAG-1     1 0.000
#> TGATTCACTATGCG-1     1 0.000
#> TGATTCACTGTCAG-1     1 0.000
#> TGATTCTGCCGAAT-1     1 0.000
#> TGATTCTGCTCTTA-1     1 0.000
#> TGCAAGTGAGAACA-1     1 0.000
#> TGCAAGTGGGTAGG-1     2 0.000
#> TGCAATCTTCAGGT-1     2 0.000
#> TGCACAGACGACAT-1     3 0.000
#> TGCCAAGAGCAGTT-1     2 0.000
#> TGCCAAGATCTCTA-1     1 0.000
#> TGCCACTGAACGTC-1     1 0.000
#> TGCCACTGCGATAC-1     3 0.000
#> TGCCAGCTTGGCAT-1     1 0.000
#> TGCCCAACAGCAAA-1     1 0.000
#> TGCCCAACCGCATA-1     2 0.000
#> TGCCGACTCTCCCA-1     1 0.000
#> TGCGAAACAGTCAC-1     1 0.000
#> TGCGAAACGTTGCA-1     1 0.000
#> TGCGATGAACGGTT-1     1 0.000
#> TGCGATGACCTCGT-1     1 0.000
#> TGCGATGACTAGTG-1     1 0.000
#> TGCGATGACTGCTC-1     1 0.000
#> TGCGATGACTTGCC-1     1 0.000
#> TGCGATGAGTGCTA-1     2 0.000
#> TGCGCACTCTTGAG-1     2 0.000
#> TGCGTAGAATAAGG-1     2 0.000
#> TGCGTAGACGGGAA-1     1 0.000
#> TGCGTAGATGGTCA-1     2 0.000
#> TGCTAGGAAACCGT-1     3 0.498
#> TGCTAGGATAGTCG-1     1 0.000
#> TGCTATACGGTTCA-1     2 0.000
#> TGCTATACTGCTGA-1     3 0.751
#> TGCTGAGAGAGCAG-1     3 0.000
#> TGCTGAGATTATCC-1     1 0.000
#> TGGAAAGACTCTCG-1     1 0.000
#> TGGAAAGAGCGATT-1     1 0.000
#> TGGAAAGAGGTCAT-1     2 0.000
#> TGGAAAGATATGGC-1     1 0.000
#> TGGAACACAAACAG-1     3 0.000
#> TGGAACACGCTAAC-1     3 1.000
#> TGGAAGCTCAGATC-1     1 0.000
#> TGGACCCTACACTG-1     2 0.000
#> TGGACCCTCATGGT-1     1 0.751
#> TGGACCCTGGTACT-1     2 0.000
#> TGGACTGAGTATGC-1     1 0.000
#> TGGAGACTATCAGC-1     2 0.000
#> TGGAGACTTCAAGC-1     1 0.000
#> TGGAGACTTGACCA-1     3 0.000
#> TGGAGGGACGGAGA-1     2 0.000
#> TGGAGGGAGCTATG-1     1 0.253
#> TGGATCGATAAAGG-1     1 0.000
#> TGGATGTGACCTAG-1     1 0.000
#> TGGATGTGTGAAGA-1     1 0.000
#> TGGATTCTCATACG-1     1 1.000
#> TGGCAATGCTTGTT-1     1 0.000
#> TGGCACCTTCACGA-1     1 0.000
#> TGGCACCTTCAGTG-1     2 0.000
#> TGGGTATGAAGAGT-1     1 0.000
#> TGGGTATGCACAAC-1     1 0.000
#> TGGGTATGGTACGT-1     1 0.000
#> TGGGTATGTTTGGG-1     2 0.000
#> TGGTAGACATGCCA-1     1 0.000
#> TGGTAGACCCTCAC-1     3 0.000
#> TGGTAGACCTGATG-1     1 1.000
#> TGGTAGTGCACTGA-1     2 0.000
#> TGGTATCTAAACAG-1     1 0.000
#> TGGTATCTCTTCCG-1     1 0.000
#> TGGTCAGACCCAAA-1     1 0.000
#> TGGTTACTGACGTT-1     2 0.000
#> TGGTTACTGTTCTT-1     1 0.000
#> TGTAACCTAGAGGC-1     1 0.000
#> TGTAACCTTGCCTC-1     2 0.000
#> TGTAATGACACAAC-1     3 0.000
#> TGTAATGAGGTAAA-1     3 0.000
#> TGTACTTGCTCTAT-1     2 0.000
#> TGTAGGTGCGAGAG-1     1 0.000
#> TGTAGGTGCTATGG-1     1 0.000
#> TGTAGGTGCTCTAT-1     2 0.000
#> TGTAGGTGTGCTGA-1     1 0.000
#> TGTAGTCTTCCAGA-1     1 0.000
#> TGTAGTCTTGCACA-1     3 0.502
#> TGTATCTGTTAGGC-1     1 0.000
#> TGTATGCTCATGGT-1     1 0.000
#> TGTATGCTGTAGGG-1     1 0.249
#> TGTATGCTTTCATC-1     1 0.000
#> TGTCAGGAATACCG-1     1 0.000
#> TGTCAGGAGATGAA-1     2 0.000
#> TGTCTAACCCCTTG-1     1 0.000
#> TGTGACGATTCTCA-1     3 0.000
#> TGTGAGACTGTCAG-1     2 0.000
#> TGTGAGACTTGAGC-1     1 0.000
#> TGTGAGTGACCACA-1     1 0.000
#> TGTGAGTGAGTGCT-1     2 0.000
#> TGTGAGTGGAGATA-1     3 0.000
#> TGTGATCTCTCTAT-1     1 0.000
#> TGTGATCTGACACT-1     1 0.000
#> TGTGGATGGCCAAT-1     1 0.000
#> TGTTAAGACAAAGA-1     2 0.000
#> TGTTAAGATAAGGA-1     2 0.000
#> TGTTACACCGCATA-1     2 0.000
#> TGTTACACGACTAC-1     2 0.000
#> TGTTACTGGCTACA-1     3 0.000
#> TGTTACTGTAGTCG-1     3 0.000
#> TTAACCACCGTAAC-1     1 0.000
#> TTAACCACTAAGGA-1     3 0.249
#> TTAACCACTCAGAC-1     3 1.000
#> TTACACACGTGTTG-1     1 0.000
#> TTACACACTCCTAT-1     1 0.000
#> TTACCATGAATCGC-1     2 0.000
#> TTACCATGGTTGAC-1     1 0.000
#> TTACCATGTGTCTT-1     3 0.000
#> TTACCATGTTGTGG-1     1 0.000
#> TTACGACTGAGAGC-1     1 0.000
#> TTACGACTTGACAC-1     2 0.000
#> TTACGTACGTTCAG-1     3 0.000
#> TTACTCGAAGAATG-1     2 0.000
#> TTACTCGACGCAAT-1     2 0.000
#> TTACTCGAGGGTGA-1     1 0.000
#> TTACTCGATCTACT-1     3 0.000
#> TTAGAATGTGGTGT-1     1 0.000
#> TTAGAATGTGTAGC-1     1 0.751
#> TTAGACCTCCTACC-1     1 0.000
#> TTAGACCTCCTTTA-1     2 0.000
#> TTAGCTACAACCGT-1     1 0.000
#> TTAGCTACTGTCCC-1     2 0.000
#> TTAGCTACTTTCGT-1     1 0.000
#> TTAGGGACGCGAAG-1     3 0.751
#> TTAGGGTGCTGGAT-1     1 0.000
#> TTAGGGTGTCCTGC-1     2 0.000
#> TTAGGTCTACTTTC-1     2 0.000
#> TTAGTCACCAGTTG-1     1 0.249
#> TTAGTCTGAAAGCA-1     1 0.000
#> TTAGTCTGCCAACA-1     3 0.000
#> TTAGTCTGTGCACA-1     1 0.000
#> TTATCCGACTAGTG-1     1 0.000
#> TTATCCGAGAAAGT-1     2 0.000
#> TTATGAGAGATAAG-1     1 0.000
#> TTATGCACGTCACA-1     1 0.000
#> TTATGGCTTATGGC-1     2 0.000
#> TTATTCCTATGCTG-1     2 0.000
#> TTATTCCTGGACAG-1     1 0.000
#> TTATTCCTGGTACT-1     1 0.000
#> TTATTCCTTCGTGA-1     1 0.000
#> TTCAAAGATAAAGG-1     1 1.000
#> TTCAACACAACAGA-1     1 0.000
#> TTCAACACCCCAAA-1     2 0.000
#> TTCAACACGGACGA-1     2 0.000
#> TTCAAGCTAAGAAC-1     2 0.000
#> TTCAAGCTAGATGA-1     1 0.000
#> TTCAAGCTGTTGAC-1     1 0.000
#> TTCAAGCTTGATGC-1     1 0.000
#> TTCAAGCTTTCGCC-1     1 0.000
#> TTCACAACCCGTTC-1     2 0.000
#> TTCACAACGTCTGA-1     2 0.249
#> TTCAGACTACCCAA-1     1 1.000
#> TTCAGACTCTCGAA-1     1 0.000
#> TTCAGTACCGACTA-1     1 0.000
#> TTCAGTACTCAAGC-1     1 0.000
#> TTCAGTACTCCTAT-1     2 0.000
#> TTCAGTTGCCAAGT-1     1 0.000
#> TTCAGTTGTCCTTA-1     2 0.000
#> TTCAGTTGTCTAGG-1     1 0.000
#> TTCAGTTGTCTCGC-1     1 0.000
#> TTCATCGAGGTGGA-1     2 0.000
#> TTCATGTGTGGTGT-1     1 0.000
#> TTCATTCTATGTCG-1     2 0.000
#> TTCATTCTTCTCTA-1     1 0.000
#> TTCCAAACCTATGG-1     2 0.000
#> TTCCAAACCTCCCA-1     1 0.000
#> TTCCAAACTCCCAC-1     3 0.000
#> TTCCAAACTTGACG-1     3 0.000
#> TTCCATGACGAGAG-1     2 0.000
#> TTCCATGACTGTCC-1     1 0.000
#> TTCCCACTTGAGGG-1     3 0.000
#> TTCCCACTTGTCTT-1     2 0.000
#> TTCCTAGAAAGTGA-1     1 0.000
#> TTCCTAGACTAGTG-1     2 0.000
#> TTCGAGGACTCTAT-1     1 0.000
#> TTCGAGGAGGGCAA-1     1 0.498
#> TTCGAGGATAGAAG-1     2 0.000
#> TTCGATTGAGCATC-1     1 0.000
#> TTCGGAGAATGCCA-1     2 0.000
#> TTCGGAGATGTGCA-1     1 0.000
#> TTCGTATGAAAAGC-1     3 0.000
#> TTCGTATGGATAGA-1     3 0.000
#> TTCGTATGGTCTGA-1     1 0.000
#> TTCGTATGTCCTTA-1     2 0.000
#> TTCTACGAACGTAC-1     1 0.000
#> TTCTACGAGTTGGT-1     1 0.000
#> TTCTAGTGACACGT-1     1 0.000
#> TTCTAGTGCATGAC-1     2 0.000
#> TTCTAGTGGAGAGC-1     3 0.000
#> TTCTAGTGGTCACA-1     2 0.000
#> TTCTCAGAAGAGAT-1     1 0.000
#> TTCTCAGAAGCATC-1     1 0.000
#> TTCTCAGATGGAGG-1     1 0.502
#> TTCTGATGGAGACG-1     3 0.000
#> TTCTTACTCTGGAT-1     2 0.000
#> TTGAACCTCCTTGC-1     1 0.000
#> TTGAATGAACTACG-1     2 0.000
#> TTGAATGACTTACT-1     1 0.000
#> TTGAATGATCTCAT-1     1 0.000
#> TTGACACTCTGTAG-1     1 0.000
#> TTGACACTGATAAG-1     1 0.000
#> TTGAGGACAGAACA-1     2 0.000
#> TTGAGGACTACGCA-1     2 0.000
#> TTGAGGTGGACGGA-1     1 0.000
#> TTGCATTGAGCTAC-1     1 0.502
#> TTGCATTGCTAAGC-1     2 0.000
#> TTGCATTGTGACTG-1     1 0.000
#> TTGCTAACACCAAC-1     3 1.000
#> TTGCTAACACGCTA-1     2 0.000
#> TTGCTAACCACTCC-1     1 0.000
#> TTGCTATGGTACGT-1     2 0.000
#> TTGCTATGGTAGGG-1     2 0.000
#> TTGGAGACCAATCG-1     1 0.000
#> TTGGAGACGCTATG-1     2 0.000
#> TTGGAGACTATGGC-1     1 0.000
#> TTGGGAACTGAACC-1     1 0.000
#> TTGGTACTACTGGT-1     2 0.000
#> TTGGTACTCTTAGG-1     1 0.000
#> TTGGTACTGAATCC-1     1 0.000
#> TTGGTACTGGATTC-1     1 0.000
#> TTGTACACGTTGTG-1     1 0.000
#> TTGTACACTTGCAG-1     1 0.000
#> TTGTAGCTAGCTCA-1     1 0.000
#> TTGTAGCTCTCTTA-1     1 0.000
#> TTGTCATGGACGGA-1     3 0.000
#> TTTAGAGATCCTCG-1     1 0.000
#> TTTAGCTGATACCG-1     1 0.000
#> TTTAGCTGGATACC-1     2 0.000
#> TTTAGCTGTACTCT-1     2 0.000
#> TTTAGGCTCCTTTA-1     2 0.000
#> TTTATCCTGTTGTG-1     2 0.000
#> TTTCACGAGGTTCA-1     1 0.000
#> TTTCAGTGGAAGGC-1     1 0.000
#> TTTCAGTGTCACGA-1     1 0.000
#> TTTCAGTGTCTATC-1     2 0.000
#> TTTCAGTGTGCAGT-1     1 0.000
#> TTTCCAGAGGTGAG-1     1 1.000
#> TTTCGAACACCTGA-1     1 1.000
#> TTTCGAACTCTCAT-1     2 0.000
#> TTTCTACTGAGGCA-1     1 0.000
#> TTTCTACTTCCTCG-1     1 0.000
#> TTTGCATGAGAGGC-1     1 0.498
#> TTTGCATGCCTCAC-1     1 0.000

show/hide code output

get_classes(res, k = 4)
#>                  class     p
#> AAACATACAACCAC-1     1 0.000
#> AAACATTGAGCTAC-1     4 0.000
#> AAACATTGATCAGC-1     1 0.249
#> AAACCGTGCTTCCG-1     2 0.000
#> AAACCGTGTATGCG-1     3 0.000
#> AAACGCACTGGTAC-1     1 0.000
#> AAACGCTGACCAGT-1     1 0.502
#> AAACGCTGGTTCTT-1     1 0.000
#> AAACGCTGTAGCCA-1     3 0.747
#> AAACGCTGTTTCTG-1     2 0.000
#> AAACTTGAAAAACG-1     4 0.000
#> AAACTTGATCCAGA-1     1 0.000
#> AAAGAGACGAGATA-1     1 0.000
#> AAAGAGACGCGAGA-1     2 0.000
#> AAAGAGACGGACTT-1     1 1.000
#> AAAGAGACGGCATT-1     1 0.000
#> AAAGCAGATATCGG-1     2 0.000
#> AAAGCCTGTATGCG-1     1 0.000
#> AAAGGCCTGTCTAG-1     4 0.249
#> AAAGTTTGATCACG-1     4 0.000
#> AAAGTTTGGGGTGA-1     4 0.000
#> AAAGTTTGTAGAGA-1     1 0.000
#> AAAGTTTGTAGCGT-1     2 0.000
#> AAATCAACAATGCC-1     4 0.000
#> AAATCAACACCAGT-1     1 0.000
#> AAATCAACCAGGAG-1     1 0.000
#> AAATCAACCCTATT-1     2 0.000
#> AAATCAACGGAAGC-1     1 0.000
#> AAATCAACTCGCAA-1     1 0.000
#> AAATCATGACCACA-1     2 0.000
#> AAATCCCTCCACAA-1     1 1.000
#> AAATCCCTGCTATG-1     4 0.000
#> AAATGTTGAACGAA-1     2 0.000
#> AAATGTTGCCACAA-1     3 0.751
#> AAATGTTGTGGCAT-1     2 0.000
#> AAATTCGAAGGTTC-1     1 0.000
#> AAATTCGAATCACG-1     2 0.000
#> AAATTCGAGCTGAT-1     2 0.000
#> AAATTCGAGGAGTG-1     1 0.000
#> AAATTCGATTCTCA-1     3 0.000
#> AAATTGACACGACT-1     1 0.000
#> AAATTGACTCGCTC-1     1 0.000
#> AACAAACTCATTTC-1     1 0.000
#> AACAAACTTTCGTT-1     1 0.000
#> AACAATACGACGAG-1     1 0.000
#> AACACGTGCAGAGG-1     1 0.000
#> AACACGTGGAAAGT-1     1 0.000
#> AACACGTGGAACCT-1     2 0.000
#> AACACGTGGCTACA-1     1 0.000
#> AACACGTGTACGAC-1     2 0.000
#> AACAGCACAAGAGT-1     2 0.000
#> AACATTGATGGGAG-1     2 0.000
#> AACCAGTGATACCG-1     2 0.000
#> AACCCAGATCGCTC-1     1 0.000
#> AACCGATGCTCCCA-1     1 0.000
#> AACCGATGGTCATG-1     4 0.000
#> AACCGATGTTCTAC-1     2 0.000
#> AACCGCCTAGCGTT-1     1 0.000
#> AACCGCCTCTACGA-1     2 0.000
#> AACCTACTGTGAGG-1     2 0.000
#> AACCTACTGTGTTG-1     1 0.000
#> AACCTTACGAGACG-1     1 0.000
#> AACCTTACGCGAGA-1     3 0.000
#> AACCTTACTAACGC-1     2 0.000
#> AACCTTTGGACGGA-1     1 0.000
#> AACCTTTGTACGCA-1     2 0.000
#> AACGCAACAAGTAG-1     1 0.000
#> AACGCATGACCCAA-1     1 0.000
#> AACGCATGCCTTCG-1     1 0.000
#> AACGCATGTACTTC-1     1 0.000
#> AACGCCCTCGGGAA-1     1 0.000
#> AACGCCCTCGTACA-1     3 0.000
#> AACGCCCTGGCATT-1     3 0.747
#> AACGTCGAGTATCG-1     3 0.000
#> AACGTGTGAAAGCA-1     1 0.000
#> AACGTGTGGCGGAA-1     4 0.000
#> AACGTGTGTCCAAG-1     1 0.000
#> AACGTGTGTGCTTT-1     1 0.000
#> AACTACCTTAGAGA-1     1 0.000
#> AACTCACTCAAGCT-1     2 0.000
#> AACTCACTTGGAGG-1     2 0.000
#> AACTCGGAAAGTGA-1     3 0.751
#> AACTCGGAAGGTCT-1     2 0.000
#> AACTCTTGCAGGAG-1     1 0.000
#> AACTGTCTCCCTTG-1     2 0.000
#> AACTTGCTACGCTA-1     4 0.000
#> AACTTGCTGGGACA-1     1 0.000
#> AAGAACGAGTGTTG-1     1 0.249
#> AAGAAGACGTAGGG-1     4 0.000
#> AAGACAGAAGTCTG-1     4 0.000
#> AAGACAGAGGATCT-1     1 0.000
#> AAGACAGATTACCT-1     2 0.000
#> AAGAGATGGGTAGG-1     4 0.000
#> AAGATGGAAAACAG-1     4 0.000
#> AAGATGGAGAACTC-1     2 0.000
#> AAGATGGAGATAAG-1     2 0.000
#> AAGATTACAACCTG-1     1 0.000
#> AAGATTACAGATCC-1     2 0.000
#> AAGATTACCCGTTC-1     2 0.000
#> AAGATTACCGCCTT-1     2 0.000
#> AAGATTACCTCAAG-1     3 0.000
#> AAGATTACTCCTCG-1     2 0.253
#> AAGCAAGAGCGAGA-1     1 0.000
#> AAGCAAGAGCTTAG-1     3 0.000
#> AAGCAAGAGGTGTT-1     3 0.000
#> AAGCACTGAGCAAA-1     4 0.249
#> AAGCACTGCATACG-1     1 0.751
#> AAGCACTGGTTCTT-1     4 0.000
#> AAGCCAACGTGTTG-1     1 0.000
#> AAGCCATGAACTGC-1     2 0.000
#> AAGCCATGACACGT-1     2 0.000
#> AAGCCATGCGTGAT-1     1 0.000
#> AAGCCATGTCTCGC-1     1 1.000
#> AAGCCTGACATGCA-1     1 1.000
#> AAGCCTGACCGAAT-1     2 0.000
#> AAGCGACTCCTCAC-1     2 0.000
#> AAGCGACTGTGTCA-1     1 0.000
#> AAGCGACTTACAGC-1     4 0.000
#> AAGCGACTTTGACG-1     2 0.000
#> AAGCGTACGTCTTT-1     1 0.000
#> AAGGCTTGCGAACT-1     3 0.498
#> AAGGTCACGGTTAC-1     2 0.000
#> AAGGTCACTGTTTC-1     4 0.000
#> AAGGTCACTTCCCG-1     1 0.249
#> AAGGTCTGACAGTC-1     1 0.000
#> AAGGTCTGCAGATC-1     1 0.000
#> AAGTAACTCTGAAC-1     2 0.000
#> AAGTAACTGAGATA-1     4 0.000
#> AAGTAGGATACAGC-1     3 0.000
#> AAGTATACCGAACT-1     1 0.000
#> AAGTCCGACTTGTT-1     1 0.000
#> AAGTCCGATAGAAG-1     1 0.000
#> AAGTCTCTAGTCGT-1     1 0.000
#> AAGTCTCTCGGAGA-1     3 0.498
#> AAGTGGCTTGGAGG-1     4 0.000
#> AAGTTCCTCATTCT-1     2 0.000
#> AAGTTCCTTCTTAC-1     1 0.000
#> AATAAGCTCGAATC-1     1 0.000
#> AATAAGCTCGTTGA-1     1 0.000
#> AATACCCTGGACGA-1     4 0.000
#> AATACCCTGGCATT-1     1 0.000
#> AATACTGAAAGGGC-1     3 0.000
#> AATACTGAATTGGC-1     3 0.000
#> AATAGGGAACCCTC-1     4 0.000
#> AATAGGGAGAATGA-1     3 0.000
#> AATCAAACTATCGG-1     1 1.000
#> AATCCGGAATGCTG-1     4 0.000
#> AATCCTACCGGTAT-1     1 0.000
#> AATCCTTGACGGGA-1     2 0.000
#> AATCCTTGGTGAGG-1     3 0.000
#> AATCGGTGGAACTC-1     3 0.000
#> AATCGGTGTGCTTT-1     1 0.000
#> AATCTAGAAAAGTG-1     1 0.000
#> AATCTAGAATCGGT-1     1 0.000
#> AATCTCACAGCCTA-1     2 0.000
#> AATCTCACTCTAGG-1     1 0.000
#> AATCTCTGAACAGA-1     1 0.000
#> AATCTCTGCTTTAC-1     3 0.000
#> AATGATACACCAAC-1     3 0.000
#> AATGATACGGTCAT-1     2 0.000
#> AATGCGTGACACCA-1     4 0.000
#> AATGCGTGGACGGA-1     2 0.000
#> AATGCGTGGCTATG-1     4 0.000
#> AATGGAGAATCGTG-1     2 0.000
#> AATGGAGATCCTTA-1     1 0.751
#> AATGGCTGACACCA-1     4 0.000
#> AATGGCTGCGTGAT-1     1 0.000
#> AATGGCTGTAAAGG-1     3 1.000
#> AATGGCTGTACTCT-1     3 0.000
#> AATGGCTGTGAAGA-1     1 0.000
#> AATGTAACGGTGGA-1     1 0.000
#> AATGTCCTCTTCTA-1     1 0.000
#> AATGTTGACAGTCA-1     1 0.000
#> AATGTTGAGTTGAC-1     2 0.000
#> AATGTTGATCTACT-1     1 0.000
#> AATTACGAATTCCT-1     2 0.000
#> AATTACGACTTCTA-1     1 0.000
#> AATTACGAGTGAGG-1     1 0.000
#> AATTACGATTGGCA-1     4 0.000
#> AATTCCTGCTCAGA-1     4 0.000
#> AATTGATGTCGCAA-1     2 0.000
#> AATTGTGACTTGGA-1     4 0.000
#> ACAAAGGAGGGTGA-1     1 0.000
#> ACAAATTGATTCTC-1     2 0.000
#> ACAAATTGCTCAGA-1     2 0.000
#> ACAAATTGTTGCGA-1     3 0.000
#> ACAACCGAGGGATG-1     3 0.000
#> ACAACCGAGTTACG-1     1 0.000
#> ACAAGAGAAGTCGT-1     2 0.000
#> ACAAGAGACTTATC-1     1 0.000
#> ACAAGAGAGTTGAC-1     4 0.000
#> ACAATCCTAACCGT-1     1 0.000
#> ACAATCCTTAGCGT-1     4 0.000
#> ACAATTGACTGACA-1     3 1.000
#> ACAATTGATGACTG-1     3 0.000
#> ACACAGACCATACG-1     3 0.000
#> ACACCAGAGGGCAA-1     1 1.000
#> ACACCCTGGTGTTG-1     3 0.000
#> ACACGAACAGTTCG-1     1 0.000
#> ACACGATGACGCAT-1     3 0.000
#> ACACGATGATGTGC-1     2 0.000
#> ACACGATGTCGTAG-1     1 0.498
#> ACACGATGTGGTCA-1     1 1.000
#> ACAGACACGGCATT-1     3 1.000
#> ACAGACACGTTGTG-1     1 0.000
#> ACAGCAACACCTAG-1     2 0.000
#> ACAGCAACCTCAAG-1     2 0.000
#> ACAGGTACCCCACT-1     1 0.000
#> ACAGGTACGCTGTA-1     1 0.000
#> ACAGGTACTGGTGT-1     3 0.000
#> ACAGTCGACCCAAA-1     1 0.498
#> ACAGTCGACCGATA-1     3 0.249
#> ACAGTGACTCACCC-1     1 0.000
#> ACAGTGACTCTATC-1     1 1.000
#> ACAGTGTGGTCACA-1     1 0.000
#> ACAGTGTGTTGCGA-1     2 0.000
#> ACATCACTCTACTT-1     2 0.000
#> ACATGGTGAAGCCT-1     1 0.000
#> ACATGGTGCAACCA-1     4 0.000
#> ACATGGTGCGAGTT-1     1 0.000
#> ACATTCTGGCATAC-1     1 0.000
#> ACATTCTGGGAACG-1     2 0.000
#> ACCAACGACATGCA-1     1 0.000
#> ACCACAGAAAGTAG-1     1 0.000
#> ACCACAGAGTTGGT-1     1 0.000
#> ACCACCTGTGTGCA-1     1 0.000
#> ACCACGCTACAGCT-1     1 0.000
#> ACCACGCTACCCAA-1     3 0.000
#> ACCACGCTGCGAGA-1     1 0.000
#> ACCACGCTGCTGTA-1     1 0.000
#> ACCAGCCTGACAGG-1     1 0.000
#> ACCAGTGAACGGTT-1     4 0.000
#> ACCAGTGAATACCG-1     2 0.000
#> ACCAGTGAGGGATG-1     1 0.000
#> ACCAGTGATGACTG-1     2 0.000
#> ACCATTACCTTCTA-1     1 0.000
#> ACCATTACGAGATA-1     3 0.000
#> ACCATTTGTCATTC-1     1 0.000
#> ACCCAAGAACTGTG-1     3 0.000
#> ACCCAAGAATTCCT-1     2 0.000
#> ACCCAAGAGGACAG-1     1 0.000
#> ACCCAAGATTCACT-1     4 0.000
#> ACCCACTGCGCCTT-1     2 0.000
#> ACCCACTGGACAGG-1     1 0.000
#> ACCCACTGGTTCAG-1     3 0.000
#> ACCCACTGTCGTAG-1     2 0.000
#> ACCCAGCTCAGAAA-1     1 0.000
#> ACCCAGCTGTTAGC-1     2 0.000
#> ACCCAGCTTGCTTT-1     1 0.000
#> ACCCGTTGATGACC-1     4 0.000
#> ACCCGTTGCTGCAA-1     1 0.000
#> ACCCGTTGCTTCTA-1     1 1.000
#> ACCCTCGACCTATT-1     3 1.000
#> ACCCTCGACGGTAT-1     4 0.000
#> ACCCTCGATAAGGA-1     2 0.000
#> ACCCTCGATCAAGC-1     2 0.000
#> ACCGTGCTACCAGT-1     1 0.000
#> ACCGTGCTGGAACG-1     4 0.000
#> ACCTATTGCTGAGT-1     4 0.000
#> ACCTATTGTGCCCT-1     2 0.000
#> ACCTCCGAGTCCTC-1     1 0.000
#> ACCTCCGATATGCG-1     1 0.000
#> ACCTCCGATGCTGA-1     1 0.000
#> ACCTCGTGAACCAC-1     1 1.000
#> ACCTGAGATATCGG-1     2 0.000
#> ACCTGGCTAAGTAG-1     3 0.000
#> ACCTTTGACTCCCA-1     2 0.000
#> ACCTTTGAGGAACG-1     2 0.000
#> ACCTTTGAGGAAGC-1     2 0.000
#> ACGAACACCTTGTT-1     3 0.000
#> ACGAACTGGCTATG-1     2 0.000
#> ACGAAGCTCTCCAC-1     1 0.000
#> ACGAAGCTCTGAGT-1     4 0.000
#> ACGACCCTATCTCT-1     2 0.000
#> ACGACCCTGATGAA-1     1 0.000
#> ACGACCCTTGACAC-1     4 0.000
#> ACGACCCTTGACCA-1     1 0.000
#> ACGAGGGACAGGAG-1     2 0.000
#> ACGAGGGACGAACT-1     1 0.000
#> ACGAGGGATGTAGC-1     1 0.000
#> ACGAGTACCCTAAG-1     4 0.000
#> ACGAGTACGAATCC-1     4 0.249
#> ACGATCGAGGACTT-1     3 0.000
#> ACGATCGAGTCACA-1     2 0.000
#> ACGATGACAATGCC-1     1 0.000
#> ACGATGACTGGTCA-1     1 0.000
#> ACGATTCTACGGGA-1     3 1.000
#> ACGCAATGGTTCAG-1     3 0.000
#> ACGCACCTGTTAGC-1     4 0.000
#> ACGCCACTGAACTC-1     2 0.000
#> ACGCCGGAAACCAC-1     2 0.000
#> ACGCCGGAAAGCCT-1     1 0.000
#> ACGCCGGAAATGCC-1     1 0.000
#> ACGCCTTGCTCCCA-1     2 0.000
#> ACGCGGTGGCGAGA-1     1 0.000
#> ACGCGGTGTGTGGT-1     4 0.000
#> ACGCGGTGTTTGCT-1     3 0.000
#> ACGCTCACAGTACC-1     1 0.000
#> ACGCTCACCCTTGC-1     1 0.000
#> ACGCTGCTGTTCTT-1     3 0.000
#> ACGGAACTCAGATC-1     3 0.000
#> ACGGAACTGTCGTA-1     2 0.000
#> ACGGAGGACTCTTA-1     2 0.000
#> ACGGATTGGGAGGT-1     4 0.000
#> ACGGATTGGTTAGC-1     1 0.000
#> ACGGCTCTGAGCAG-1     1 0.000
#> ACGGCTCTTGCACA-1     1 0.000
#> ACGGTAACCGCTAA-1     3 1.000
#> ACGGTAACCTTCGC-1     3 0.000
#> ACGGTAACGGTGGA-1     1 0.000
#> ACGGTAACTCGCAA-1     1 0.253
#> ACGGTATGAGTCGT-1     2 0.000
#> ACGGTATGGGTATC-1     4 0.000
#> ACGGTATGGTTGTG-1     4 0.000
#> ACGGTCCTAACGGG-1     1 0.249
#> ACGGTCCTCGGGAA-1     1 0.000
#> ACGTAGACAACCAC-1     1 0.000
#> ACGTAGACTACAGC-1     4 0.000
#> ACGTCAGAAACGAA-1     1 0.000
#> ACGTCAGAGAGCTT-1     2 0.000
#> ACGTCAGAGGGATG-1     1 0.000
#> ACGTCCTGATAAGG-1     2 0.000
#> ACGTCCTGTGAACC-1     2 0.000
#> ACGTCGCTCCTGAA-1     3 0.000
#> ACGTCGCTCTATTC-1     2 0.502
#> ACGTCGCTTCTCAT-1     4 0.000
#> ACGTGATGCCATGA-1     2 0.000
#> ACGTGATGGGTCTA-1     1 0.000
#> ACGTGATGTAACCG-1     2 0.000
#> ACGTGATGTGACAC-1     3 0.000
#> ACGTGCCTCCGTAA-1     1 0.000
#> ACGTGCCTTCTATC-1     3 0.000
#> ACGTTACTTTCCAT-1     1 0.000
#> ACGTTGGAAAAGCA-1     1 0.000
#> ACGTTGGAAACCTG-1     3 0.000
#> ACGTTGGACCGTAA-1     2 0.000
#> ACGTTGGAGCCAAT-1     3 0.000
#> ACGTTGGATATGGC-1     4 0.000
#> ACGTTGGATCAGGT-1     2 0.000
#> ACGTTTACATCAGC-1     1 0.000
#> ACTAAAACCCACAA-1     1 1.000
#> ACTAAAACTCGACA-1     2 0.000
#> ACTACGGAATTTCC-1     1 0.000
#> ACTACGGACCTATT-1     1 0.000
#> ACTACGGATCGCTC-1     1 0.000
#> ACTACTACTAAGGA-1     1 0.000
#> ACTAGGTGGAACCT-1     1 1.000
#> ACTAGGTGGAACTC-1     1 0.000
#> ACTATCACCTTGGA-1     3 0.000
#> ACTATCACTGCCAA-1     1 0.000
#> ACTCAGGACTGAAC-1     1 0.000
#> ACTCAGGATCTATC-1     4 0.000
#> ACTCAGGATTCGTT-1     2 0.000
#> ACTCCTCTCAACTG-1     1 0.000
#> ACTCGCACGAAAGT-1     2 0.000
#> ACTCGCACTACGAC-1     2 0.000
#> ACTCTCCTGACACT-1     1 0.000
#> ACTCTCCTGCATAC-1     4 1.000
#> ACTCTCCTGTTTGG-1     1 0.000
#> ACTGAGACAACCAC-1     3 0.751
#> ACTGAGACCCATAG-1     2 0.000
#> ACTGAGACGTTGGT-1     4 0.000
#> ACTGCCACACACGT-1     3 0.000
#> ACTGCCACTCCGTC-1     3 0.000
#> ACTGGCCTTCAGTG-1     3 0.000
#> ACTGTGGACGTGTA-1     3 0.253
#> ACTGTGGATCTAGG-1     4 0.000
#> ACTGTTACCCACAA-1     2 0.000
#> ACTGTTACTGCAGT-1     1 0.000
#> ACTTAAGAACCACA-1     1 0.000
#> ACTTAAGATTACTC-1     2 0.000
#> ACTTAGCTGCGTAT-1     2 0.000
#> ACTTAGCTGGGAGT-1     1 0.000
#> ACTTCAACAAGCAA-1     3 0.000
#> ACTTCAACGTAGGG-1     3 0.000
#> ACTTCCCTTTCCGC-1     1 0.000
#> ACTTCTGACATGCA-1     4 0.000
#> ACTTGACTCCACAA-1     4 0.000
#> ACTTGGGAGAAAGT-1     2 0.000
#> ACTTGGGAGGTTTG-1     1 0.502
#> ACTTGGGATGTGAC-1     2 0.000
#> ACTTGGGATTGACG-1     2 0.000
#> ACTTGTACCTGTCC-1     1 0.000
#> ACTTTGTGGAAAGT-1     1 0.000
#> ACTTTGTGGATAGA-1     2 0.000
#> AGAAACGAAAGTAG-1     4 0.000
#> AGAAAGTGCGCAAT-1     1 0.000
#> AGAAAGTGGGGATG-1     2 0.000
#> AGAACAGAAATGCC-1     3 0.000
#> AGAACAGACGACTA-1     4 0.000
#> AGAACAGAGACAAA-1     1 0.000
#> AGAACGCTTTGCTT-1     1 0.000
#> AGAAGATGTGACTG-1     1 0.000
#> AGAATGGAAGAAGT-1     3 1.000
#> AGAATTTGTAACCG-1     1 0.000
#> AGAATTTGTAGAGA-1     1 0.000
#> AGACACACTGTAGC-1     1 0.000
#> AGACACTGTCAAGC-1     2 0.000
#> AGACCTGAAGTAGA-1     2 0.000
#> AGACCTGACCAACA-1     1 0.000
#> AGACCTGAGGAAGC-1     1 1.000
#> AGACGTACAGAGGC-1     1 0.000
#> AGACGTACCCCTAC-1     4 0.000
#> AGACGTACCTCTTA-1     2 0.000
#> AGACGTACTCGTGA-1     2 0.000
#> AGACTGACCATCAG-1     1 0.502
#> AGACTGACCCTTTA-1     1 0.000
#> AGACTTCTCATGCA-1     4 0.000
#> AGAGATGACAGTCA-1     4 0.000
#> AGAGATGACTGAAC-1     1 0.000
#> AGAGATGAGGTTTG-1     2 0.000
#> AGAGATGATCTCGC-1     4 0.000
#> AGAGATGATTGTGG-1     1 0.000
#> AGAGCGGAGGCAAG-1     2 0.000
#> AGAGTCTGGTCGTA-1     2 0.000
#> AGAGTGCTCAGCTA-1     1 0.000
#> AGAGTGCTCGAATC-1     1 0.000
#> AGAGTGCTGTCATG-1     1 0.000
#> AGAGTGCTGTCCTC-1     1 1.000
#> AGAGTGCTGTGTTG-1     4 0.000
#> AGATATACCCGTAA-1     3 0.000
#> AGATATACGATGAA-1     1 0.000
#> AGATATACTGTTCT-1     4 0.000
#> AGATATTGCCTACC-1     1 1.000
#> AGATATTGGCCAAT-1     2 0.000
#> AGATCGTGTCTGGA-1     2 0.000
#> AGATCGTGTTTGTC-1     4 0.000
#> AGATCTCTATCACG-1     4 0.000
#> AGATTAACGTTCTT-1     2 0.000
#> AGATTCCTATCGTG-1     1 0.000
#> AGATTCCTCACTTT-1     2 0.000
#> AGATTCCTGACGAG-1     2 0.000
#> AGATTCCTGTTCAG-1     3 0.000
#> AGCAAAGATATGCG-1     1 0.000
#> AGCACAACAGTCTG-1     1 0.000
#> AGCACTGAGGGAGT-1     1 0.000
#> AGCACTGATATGCG-1     1 0.000
#> AGCACTGATGCTTT-1     2 0.000
#> AGCACTGATTGCGA-1     1 0.000
#> AGCATCGAAGATCC-1     1 0.000
#> AGCATCGAAGGGTG-1     4 0.000
#> AGCATCGAGCTTCC-1     2 0.000
#> AGCATCGAGTGAGG-1     1 0.000
#> AGCATCGATAACCG-1     2 0.000
#> AGCATGACGATGAA-1     3 1.000
#> AGCCAATGGGGAGT-1     2 0.000
#> AGCCAATGTATCTC-1     1 0.000
#> AGCCACCTGGATCT-1     3 0.249
#> AGCCGGTGCCAATG-1     1 0.000
#> AGCCGGTGTGTTTC-1     1 0.000
#> AGCCGTCTCAATCG-1     1 0.000
#> AGCCGTCTGAGAGC-1     1 0.000
#> AGCCTCACGTTCGA-1     1 0.000
#> AGCCTCACTGTCAG-1     2 0.000
#> AGCCTCTGCAGTTG-1     4 0.000
#> AGCCTCTGCCAATG-1     3 0.000
#> AGCGAACTGGATCT-1     1 0.000
#> AGCGAACTTACTGG-1     1 0.000
#> AGCGATACGGAGCA-1     1 0.000
#> AGCGATTGAGATCC-1     3 0.000
#> AGCGCCGAATCTCT-1     1 0.000
#> AGCGCCGACAGAGG-1     1 0.498
#> AGCGCTCTACCTTT-1     1 0.000
#> AGCGGCACCGGGAA-1     1 0.000
#> AGCGGCTGATGTGC-1     1 0.000
#> AGCGGGCTTGCCAA-1     1 0.000
#> AGCGTAACATGCTG-1     1 0.000
#> AGCGTAACTGAGAA-1     2 0.000
#> AGCTCGCTACTGGT-1     1 0.000
#> AGCTCGCTCTGCTC-1     1 0.000
#> AGCTGAACCATACG-1     2 0.000
#> AGCTGAACCTCTCG-1     1 0.000
#> AGCTGCCTTGGGAG-1     2 0.000
#> AGCTGCCTTTCATC-1     1 0.000
#> AGCTGCCTTTCTGT-1     1 0.000
#> AGCTGTGATCCAAG-1     1 0.000
#> AGCTTTACAAGTAG-1     1 0.000
#> AGCTTTACACCAAC-1     1 1.000
#> AGCTTTACTCTCAT-1     4 0.000
#> AGGAAATGAGGAGC-1     1 0.000
#> AGGAACCTCTTAGG-1     2 0.000
#> AGGAACCTTGCCTC-1     3 0.000
#> AGGAATGATAACGC-1     1 0.000
#> AGGAATGATTTGTC-1     1 0.000
#> AGGAGTCTGGTTTG-1     1 0.000
#> AGGAGTCTTGTCAG-1     1 0.000
#> AGGATAGACATTTC-1     1 0.000
#> AGGATAGAGGATTC-1     3 0.000
#> AGGATGCTACTAGC-1     4 0.000
#> AGGATGCTTTAGGC-1     3 0.000
#> AGGCAACTGAAGGC-1     1 0.000
#> AGGCAGGAGTACCA-1     1 0.000
#> AGGCCTCTAGTCGT-1     1 0.000
#> AGGCCTCTCGGAGA-1     1 0.000
#> AGGCCTCTCGTAAC-1     1 0.000
#> AGGGACGACGTTGA-1     1 0.000
#> AGGGACGAGTCAAC-1     3 0.000
#> AGGGACGAGTTGTG-1     1 0.000
#> AGGGACGATAGAGA-1     1 0.000
#> AGGGACGATGCATG-1     3 0.000
#> AGGGAGTGAGCCTA-1     1 0.000
#> AGGGCCACCATACG-1     1 0.000
#> AGGGCGCTAACCAC-1     2 0.000
#> AGGGCGCTATGGTC-1     3 0.502
#> AGGGTGGACAGTCA-1     4 0.000
#> AGGGTGGACTCAAG-1     2 0.000
#> AGGGTGGAGTTGCA-1     3 0.747
#> AGGGTTTGTTCATC-1     2 0.000
#> AGGTCATGAGTGTC-1     4 0.000
#> AGGTCATGCTTATC-1     1 0.249
#> AGGTCTGATTCTCA-1     2 0.000
#> AGGTGGGAAGAATG-1     1 0.000
#> AGGTGGGAAGTTCG-1     1 0.000
#> AGGTGTTGGTTACG-1     4 0.000
#> AGGTTCGAACCTCC-1     2 0.000
#> AGGTTCGAACGTAC-1     2 0.000
#> AGGTTCGAGGGTGA-1     1 0.000
#> AGTAAGGAGTTTGG-1     1 1.000
#> AGTAAGGATTCTTG-1     1 0.000
#> AGTAATACATCACG-1     3 0.000
#> AGTAATACCGAACT-1     4 0.000
#> AGTAATTGTCCCAC-1     1 0.000
#> AGTACGTGAGGGTG-1     1 0.000
#> AGTACGTGCTGCAA-1     1 0.000
#> AGTACGTGCTTGGA-1     1 0.000
#> AGTACTCTACGTGT-1     4 0.000
#> AGTACTCTCAACCA-1     3 0.000
#> AGTACTCTCGGTAT-1     1 0.249
#> AGTAGGCTTGCCTC-1     2 0.000
#> AGTATAACTTGTCT-1     2 0.000
#> AGTATCCTAGAACA-1     1 0.000
#> AGTCACGATGAGCT-1     3 0.000
#> AGTCAGACGAATAG-1     1 0.000
#> AGTCAGACGCTTAG-1     1 0.000
#> AGTCAGACTAGAGA-1     3 1.000
#> AGTCAGACTGCACA-1     1 0.000
#> AGTCCAGATATCTC-1     1 0.000
#> AGTCCAGATTTCAC-1     1 0.000
#> AGTCGAACCAACCA-1     1 0.000
#> AGTCGCCTCCGTAA-1     1 0.000
#> AGTCTACTAGGGTG-1     2 0.000
#> AGTCTACTTGCATG-1     2 0.000
#> AGTCTTACACCACA-1     1 0.000
#> AGTCTTACTTCGCC-1     1 1.000
#> AGTCTTACTTCGGA-1     3 0.000
#> AGTGACTGCAACTG-1     2 0.000
#> AGTGTTCTAACCTG-1     1 0.000
#> AGTGTTCTATAAGG-1     1 0.000
#> AGTGTTCTCACTTT-1     2 0.000
#> AGTTAAACCACTTT-1     1 0.000
#> AGTTATGAACAGTC-1     2 0.000
#> AGTTATGACTGAGT-1     1 1.000
#> AGTTATGAGTTCAG-1     1 0.000
#> AGTTCTACCAGCTA-1     2 0.000
#> AGTTCTTGAAGCCT-1     3 0.249
#> AGTTGTCTACTACG-1     1 0.000
#> AGTTTAGATGGTCA-1     1 0.000
#> AGTTTCACGGTCTA-1     3 0.000
#> AGTTTGCTACAGTC-1     1 0.000
#> AGTTTGCTACTGGT-1     3 0.000
#> AGTTTGCTCCAAGT-1     1 0.000
#> ATAAACACAGTGCT-1     4 0.000
#> ATAAACACCACCAA-1     1 0.000
#> ATAACAACATGCTG-1     2 0.000
#> ATAACAACGTCTAG-1     1 0.000
#> ATAACAACTTTGTC-1     1 0.000
#> ATAACATGTACTCT-1     1 0.000
#> ATAACCCTGTTGGT-1     1 0.000
#> ATAACCCTTGGTAC-1     1 0.000
#> ATAAGTACGAATGA-1     4 0.000
#> ATAAGTTGGTACGT-1     2 0.000
#> ATAAGTTGTCTAGG-1     1 0.000
#> ATAATCGAGCTGAT-1     4 0.000
#> ATAATCGATGGTTG-1     1 0.000
#> ATAATGACCTACTT-1     1 0.000
#> ATAATGACTCGTGA-1     2 0.000
#> ATACAATGTTAGGC-1     1 0.000
#> ATACCACTCGTACA-1     2 0.000
#> ATACCACTCTAAGC-1     2 0.000
#> ATACCACTGCCAAT-1     3 0.000
#> ATACCGGAATGCTG-1     2 0.000
#> ATACCGGACATTTC-1     2 0.000
#> ATACCGGACTTCGC-1     1 0.000
#> ATACCGGAGGTGTT-1     2 0.000
#> ATACCGGATCTCGC-1     1 0.000
#> ATACCTACGCATCA-1     1 0.000
#> ATACCTTGGGGCAA-1     1 0.000
#> ATACGGACAGACTC-1     2 0.000
#> ATACGGACCTACTT-1     2 0.000
#> ATACGGACGAGGTG-1     4 0.000
#> ATACGGACTATGCG-1     4 0.000
#> ATACGGACTCTGGA-1     2 0.000
#> ATACGTCTTAACGC-1     2 0.000
#> ATACTCTGCTTCGC-1     2 0.000
#> ATACTCTGGTATGC-1     3 0.000
#> ATAGATACCATGGT-1     1 0.000
#> ATAGATACGACGAG-1     1 0.000
#> ATAGATTGGTGTAC-1     4 0.000
#> ATAGCCGAACGGAG-1     1 0.000
#> ATAGCGTGCAGATC-1     1 0.000
#> ATAGCGTGCCCTTG-1     2 0.000
#> ATAGCGTGGTATCG-1     2 0.000
#> ATAGCGTGTCTCTA-1     1 0.000
#> ATAGCTCTCTGATG-1     1 0.000
#> ATAGCTCTGAGGTG-1     1 0.000
#> ATAGGAGAAACAGA-1     2 0.000
#> ATAGGCTGTCAGAC-1     1 0.000
#> ATAGTCCTAGTGTC-1     2 0.000
#> ATAGTCCTTGCATG-1     1 0.747
#> ATAGTCCTTGTCGA-1     1 0.000
#> ATAGTTGACAACTG-1     1 0.000
#> ATAGTTGACCCTCA-1     2 0.000
#> ATAGTTGAGACGTT-1     1 0.000
#> ATAGTTGATAAGCC-1     1 0.000
#> ATATACGAAGCCAT-1     1 0.000
#> ATATACGAATTGGC-1     1 0.000
#> ATATAGTGGAATGA-1     2 0.000
#> ATATGCCTAGATCC-1     2 0.000
#> ATATGCCTGGACAG-1     1 0.000
#> ATATGCCTTCTCTA-1     1 0.000
#> ATATGCCTTGGTAC-1     1 0.000
#> ATCAAATGAGCCTA-1     2 0.000
#> ATCAAATGGGTAAA-1     2 0.000
#> ATCAACCTAAACGA-1     1 0.000
#> ATCAACCTGAGGAC-1     1 0.000
#> ATCAACCTTCTCTA-1     3 0.498
#> ATCAACCTTTGTCT-1     1 0.000
#> ATCACACTTTGTCT-1     1 0.000
#> ATCACGGATTTCGT-1     4 0.000
#> ATCATCTGACACCA-1     3 0.000
#> ATCATGCTAGAGTA-1     3 0.000
#> ATCATGCTGAACCT-1     4 0.000
#> ATCCAGGACGCTAA-1     2 0.000
#> ATCCAGGATGGAAA-1     1 0.000
#> ATCCATACTCCTTA-1     2 0.000
#> ATCCATACTTCATC-1     2 0.000
#> ATCCCGTGCAGTCA-1     3 0.000
#> ATCCCGTGCATGCA-1     4 0.000
#> ATCCCGTGGCTGAT-1     4 0.000
#> ATCCGCACGCATCA-1     4 0.000
#> ATCCTAACGACGGA-1     4 0.000
#> ATCCTAACGCTACA-1     3 0.249
#> ATCGACGAAACTGC-1     2 0.000
#> ATCGACGAATGACC-1     1 0.000
#> ATCGAGTGGACGTT-1     3 0.000
#> ATCGCAGAATCTCT-1     2 0.000
#> ATCGCAGAGTGTCA-1     4 0.000
#> ATCGCCACTGAGGG-1     3 0.253
#> ATCGCCTGGGTCAT-1     1 0.000
#> ATCGCCTGTGGCAT-1     4 0.000
#> ATCGCGCTCAGAGG-1     2 0.000
#> ATCGCGCTGGGATG-1     1 0.000
#> ATCGCGCTTTTCGT-1     4 0.000
#> ATCGGAACCAGTCA-1     1 0.000
#> ATCGGTGAGTCAAC-1     1 0.000
#> ATCGGTGATTGCAG-1     1 0.000
#> ATCGTTTGCCTACC-1     2 0.000
#> ATCGTTTGGGTACT-1     2 0.000
#> ATCGTTTGTGCCAA-1     2 0.000
#> ATCTACACCCGCTT-1     2 0.000
#> ATCTACACCGGGAA-1     1 0.000
#> ATCTCAACAGGAGC-1     4 0.000
#> ATCTCAACCTCGAA-1     1 0.000
#> ATCTCAACCTTGTT-1     2 0.000
#> ATCTGGGAAACCAC-1     2 0.000
#> ATCTGGGAAGTGTC-1     2 0.000
#> ATCTGGGATTCCGC-1     1 0.751
#> ATCTGTTGAACGGG-1     1 0.000
#> ATCTGTTGACCTCC-1     1 0.000
#> ATCTGTTGCCTTCG-1     2 0.000
#> ATCTGTTGGTTGCA-1     1 0.000
#> ATCTTGACACCAAC-1     1 0.000
#> ATCTTGACCTCCCA-1     2 0.000
#> ATCTTTCTGCATCA-1     1 1.000
#> ATCTTTCTGTTTCT-1     1 1.000
#> ATCTTTCTTGTCCC-1     3 0.000
#> ATGAAACTCTGTGA-1     1 0.000
#> ATGAAACTGAGGCA-1     1 0.000
#> ATGAAGGAACAGCT-1     3 0.249
#> ATGAAGGACCTGTC-1     4 0.000
#> ATGAAGGACCTTAT-1     4 0.000
#> ATGAAGGACTAGTG-1     4 0.000
#> ATGAAGGACTTGCC-1     3 0.000
#> ATGACGTGACGACT-1     4 0.000
#> ATGACGTGATCGGT-1     2 0.000
#> ATGAGAGAAAGTGA-1     1 0.000
#> ATGAGAGAACGCAT-1     1 0.000
#> ATGAGAGAAGTAGA-1     4 0.000
#> ATGAGCACACAGCT-1     1 0.000
#> ATGAGCACATCTTC-1     1 0.000
#> ATGATAACTTCACT-1     3 0.000
#> ATGATATGAAACAG-1     1 0.000
#> ATGATATGACTGGT-1     1 0.000
#> ATGATATGAGCACT-1     1 0.000
#> ATGATATGGTCATG-1     1 0.000
#> ATGATATGGTGCTA-1     3 0.000
#> ATGATATGTTGTCT-1     2 0.000
#> ATGCACGAATGTCG-1     4 0.000
#> ATGCACGACTGTAG-1     1 0.000
#> ATGCACGAGAACCT-1     4 0.000
#> ATGCACGAGTTCGA-1     1 0.000
#> ATGCACGATTGGTG-1     2 0.000
#> ATGCAGTGTTACCT-1     4 0.000
#> ATGCAGTGTTCTAC-1     1 0.000
#> ATGCCAGAACGACT-1     1 0.000
#> ATGCCAGACAGTCA-1     2 0.000
#> ATGCCGCTTGAACC-1     2 0.000
#> ATGCGATGCTATGG-1     2 0.000
#> ATGCGATGCTGAGT-1     1 0.000
#> ATGCGATGGTTACG-1     4 0.000
#> ATGCGCCTTCATTC-1     1 0.000
#> ATGCTTTGCGAATC-1     1 0.000
#> ATGCTTTGGGCGAA-1     1 1.000
#> ATGCTTTGTAGTCG-1     4 0.000
#> ATGGACACATCGGT-1     1 0.000
#> ATGGACACGCATCA-1     3 0.000
#> ATGGGTACAACCTG-1     4 0.000
#> ATGGGTACATCGGT-1     3 0.000
#> ATGGGTACTATTCC-1     1 0.000
#> ATGGGTACTGGGAG-1     1 0.000
#> ATGTAAACACCTCC-1     1 0.000
#> ATGTAAACCCGCTT-1     1 0.000
#> ATGTAAACGGGATG-1     2 0.000
#> ATGTAAACTCTCCG-1     1 0.000
#> ATGTAAACTTCACT-1     2 0.000
#> ATGTACCTCAGTCA-1     1 0.000
#> ATGTACCTTAGTCG-1     1 0.000
#> ATGTACCTTTATCC-1     2 0.000
#> ATGTACCTTTCACT-1     3 0.000
#> ATGTCACTAATGCC-1     2 0.000
#> ATGTCACTCTGCTC-1     1 0.000
#> ATGTCGGAGGTGAG-1     1 0.000
#> ATGTTCACAGTCTG-1     2 0.000
#> ATGTTCACCGTAGT-1     1 0.000
#> ATGTTGCTTTCAGG-1     1 0.000
#> ATTAACGATGAGAA-1     3 0.000
#> ATTAACGATGCAAC-1     3 0.000
#> ATTAAGACTGCAGT-1     1 0.000
#> ATTACCTGCCTTAT-1     2 0.000
#> ATTACCTGGAGGAC-1     2 0.000
#> ATTAGATGTTTCAC-1     1 0.000
#> ATTATGGAATCTCT-1     1 0.000
#> ATTCAAGAACGGGA-1     1 0.000
#> ATTCAAGACCTTTA-1     1 0.000
#> ATTCAGCTCATTGG-1     3 0.000
#> ATTCCAACCATTGG-1     2 0.000
#> ATTCCAACTTAGGC-1     3 0.000
#> ATTCGACTCACTAG-1     3 1.000
#> ATTCGACTGAATAG-1     2 0.000
#> ATTCGACTTTTGTC-1     2 0.000
#> ATTCGGGAAAGGCG-1     2 0.000
#> ATTCGGGATTAGGC-1     1 0.000
#> ATTCTTCTGATACC-1     1 0.000
#> ATTGAATGGACGGA-1     1 0.000
#> ATTGATGAAGGTTC-1     1 0.000
#> ATTGATGACTGAGT-1     1 0.000
#> ATTGATGAGCGAAG-1     1 0.000
#> ATTGATGATCTATC-1     1 0.000
#> ATTGCACTGACGGA-1     1 0.000
#> ATTGCACTGAGAGC-1     2 0.000
#> ATTGCACTGGAGCA-1     2 0.000
#> ATTGCACTTAGCCA-1     1 0.000
#> ATTGCACTTGCTTT-1     2 0.000
#> ATTGCTTGTTACTC-1     4 0.000
#> ATTGGTCTGACTAC-1     4 0.000
#> ATTGGTCTTGTCTT-1     4 0.000
#> ATTGTAGATTCCCG-1     2 0.000
#> ATTGTAGATTGCAG-1     1 0.000
#> ATTGTCTGCGTACA-1     1 0.000
#> ATTTAGGAACCATG-1     2 0.000
#> ATTTAGGACAGAGG-1     1 0.000
#> ATTTCCGAGATGAA-1     1 0.000
#> ATTTCCGAGTGCTA-1     1 0.000
#> ATTTCGTGTATGGC-1     3 0.000
#> ATTTCTCTACTTTC-1     2 0.000
#> ATTTCTCTAGCAAA-1     1 1.000
#> ATTTCTCTCACTTT-1     2 0.000
#> ATTTCTCTTCCCAC-1     1 0.000
#> ATTTGCACAAGATG-1     2 0.000
#> CAAAGCACAGCTCA-1     1 0.000
#> CAAAGCACCGTAAC-1     4 0.000
#> CAAAGCACGGTAAA-1     3 0.000
#> CAAAGCTGAAAGTG-1     1 0.000
#> CAAAGCTGTTGCTT-1     2 0.000
#> CAAATATGTGACAC-1     1 0.000
#> CAAATTGAGGGCAA-1     1 0.000
#> CAAATTGATGGAGG-1     2 0.000
#> CAACCAGAAAAGTG-1     1 0.000
#> CAACCAGAAGTGCT-1     1 0.000
#> CAACCAGAGTTCAG-1     2 0.000
#> CAACCAGATAGAAG-1     2 0.000
#> CAACCGCTGTTCAG-1     1 0.000
#> CAACCGCTTTGAGC-1     1 0.000
#> CAACGATGCGCAAT-1     2 0.000
#> CAACGTGACTCCAC-1     2 0.000
#> CAACGTGAGCCATA-1     3 0.000
#> CAACGTGATCAAGC-1     2 0.000
#> CAAGAAGACCACAA-1     3 0.249
#> CAAGAAGACGTCTC-1     2 0.000
#> CAAGAAGATTCTAC-1     1 0.000
#> CAAGACTGACCTGA-1     4 0.000
#> CAAGACTGAGTAGA-1     4 0.000
#> CAAGCTGACCATAG-1     2 0.000
#> CAAGCTGATCTATC-1     3 0.000
#> CAAGGACTGTTCAG-1     1 0.000
#> CAAGGACTTCTTTG-1     3 1.000
#> CAAGGTTGCTCCAC-1     1 0.000
#> CAAGGTTGTCATTC-1     4 0.000
#> CAAGGTTGTCTGGA-1     3 0.000
#> CAAGTCGAAACAGA-1     4 0.000
#> CAAGTCGATAGCGT-1     2 0.000
#> CAATAAACGCCATA-1     2 0.000
#> CAATAATGAACTGC-1     2 0.000
#> CAATATGACATGGT-1     1 0.000
#> CAATATGACCTTCG-1     3 0.000
#> CAATATGACGTTAG-1     1 0.000
#> CAATATGAGGAGCA-1     1 0.000
#> CAATCGGAGAAACA-1     1 0.000
#> CAATCTACTGACTG-1     3 0.000
#> CAATTCACCCAACA-1     3 0.000
#> CAATTCACGATAGA-1     1 0.000
#> CAATTCACTTGTGG-1     1 0.000
#> CAATTCTGCTTGTT-1     2 0.000
#> CAATTCTGGCGTAT-1     2 0.000
#> CACAACGATACGAC-1     1 0.000
#> CACAATCTTGTTCT-1     1 0.249
#> CACAATCTTTCCAT-1     1 0.000
#> CACACCTGCTTGAG-1     1 0.000
#> CACACCTGTATGGC-1     1 0.000
#> CACAGAACCCTTGC-1     4 0.000
#> CACAGAACCTGATG-1     1 0.000
#> CACAGATGGGATTC-1     1 0.000
#> CACAGATGGTTTCT-1     2 0.000
#> CACAGCCTGATACC-1     1 0.000
#> CACAGCCTTGCCAA-1     2 0.000
#> CACAGCCTTGTAGC-1     1 0.000
#> CACAGTGATGAAGA-1     2 0.000
#> CACATACTACAGCT-1     3 0.502
#> CACATGGAACACGT-1     1 0.000
#> CACATGGAAGTCGT-1     1 0.000
#> CACCACTGCCAACA-1     1 0.000
#> CACCACTGGCGAAG-1     3 0.000
#> CACCCATGTTCTGT-1     3 1.000
#> CACCGGGAATCGAC-1     1 0.000
#> CACCGGGACGAGAG-1     3 0.000
#> CACCGGGACGTGTA-1     1 0.000
#> CACCGGGACTTCTA-1     3 0.000
#> CACCGGGACTTGCC-1     3 0.000
#> CACCGGGATTCGGA-1     3 0.000
#> CACCGTACTAAGGA-1     4 0.000
#> CACCGTACTAGCGT-1     1 0.000
#> CACCTGACACCCAA-1     3 0.000
#> CACCTGACCAGAAA-1     1 0.000
#> CACCTGACCTCAAG-1     3 0.000
#> CACCTGACGAAAGT-1     4 0.000
#> CACCTGACTCGTAG-1     1 0.000
#> CACGAAACTTCCGC-1     4 0.000
#> CACGACCTCGATAC-1     4 0.000
#> CACGCTACAGAAGT-1     1 1.000
#> CACGCTACTGTTCT-1     4 0.000
#> CACGGGACAGAGTA-1     1 0.000
#> CACGGGACATAAGG-1     1 0.000
#> CACGGGACGTAGGG-1     1 0.000
#> CACGGGTGCTTCGC-1     3 0.000
#> CACGGGTGGAGGAC-1     3 0.000
#> CACGGGTGTGTTTC-1     1 0.000
#> CACTAACTCCTAAG-1     4 0.000
#> CACTAACTGAAAGT-1     1 0.000
#> CACTAGGATGATGC-1     4 0.000
#> CACTATACCCCGTT-1     4 0.000
#> CACTATACGTTTGG-1     3 0.000
#> CACTGAGACAGTCA-1     2 0.000
#> CACTGCACTTCATC-1     1 0.000
#> CACTGCTGAGACTC-1     2 0.000
#> CACTGCTGGAAAGT-1     1 0.000
#> CACTTAACCGAATC-1     1 0.000
#> CACTTAACCGTACA-1     4 0.000
#> CACTTTGACTCTAT-1     3 0.000
#> CACTTTGAGCTGTA-1     1 1.000
#> CAGAAGCTCTCAAG-1     1 0.000
#> CAGACATGAACGGG-1     1 0.000
#> CAGACATGTCGACA-1     1 0.000
#> CAGACCCTAAGGTA-1     2 0.000
#> CAGACCCTAATGCC-1     1 0.000
#> CAGACCCTAGGAGC-1     1 0.000
#> CAGACTGAGTATGC-1     1 0.000
#> CAGATCGAATGTCG-1     4 0.000
#> CAGATCGACCTGAA-1     1 0.000
#> CAGATCGATATGGC-1     1 0.000
#> CAGATGACATTCTC-1     3 0.000
#> CAGCAATGCCTTCG-1     1 0.000
#> CAGCAATGGAGGGT-1     3 0.000
#> CAGCAATGGTGCTA-1     1 0.000
#> CAGCAATGTCTACT-1     2 0.000
#> CAGCAATGTGACCA-1     1 0.000
#> CAGCAATGTGAGGG-1     2 0.000
#> CAGCACCTAAGCCT-1     1 0.000
#> CAGCACCTAGGCGA-1     1 0.000
#> CAGCACCTGTAGGG-1     2 0.000
#> CAGCATGACAACCA-1     2 0.000
#> CAGCATGAGACGTT-1     1 0.000
#> CAGCCTACCCAACA-1     1 0.000
#> CAGCCTTGCTACCC-1     2 0.000
#> CAGCCTTGGGGACA-1     1 0.000
#> CAGCGGACACCCTC-1     1 0.000
#> CAGCGGACCTTTAC-1     3 0.000
#> CAGCGTCTAAAGCA-1     1 0.000
#> CAGCGTCTTATCGG-1     1 0.000
#> CAGCTAGATGTGAC-1     2 0.000
#> CAGCTCTGAGGCGA-1     1 0.000
#> CAGCTCTGCAAGCT-1     3 0.000
#> CAGCTCTGTCGTAG-1     2 0.000
#> CAGCTCTGTGTGGT-1     3 0.000
#> CAGGAACTAACTGC-1     1 1.000
#> CAGGAACTCTCAGA-1     2 0.000
#> CAGGCCGAACACCA-1     1 0.000
#> CAGGCCGAACACGT-1     1 0.000
#> CAGGCCGAACGACT-1     1 0.000
#> CAGGCCGAATCTCT-1     2 0.000
#> CAGGCCGACTAGCA-1     4 0.000
#> CAGGGCACCATACG-1     4 0.000
#> CAGGGCACCCAACA-1     1 0.000
#> CAGGGCACTCCCGT-1     1 0.000
#> CAGGTAACAGACTC-1     2 0.000
#> CAGGTATGAGTCGT-1     1 0.000
#> CAGGTATGTGCTTT-1     1 0.000
#> CAGGTTGAGGATCT-1     4 0.000
#> CAGTGATGGACGGA-1     4 0.000
#> CAGTGATGGCTAAC-1     3 0.000
#> CAGTGATGGGACAG-1     1 0.000
#> CAGTGATGTAAGGA-1     4 0.000
#> CAGTGATGTACGCA-1     4 0.249
#> CAGTGTGATGTCAG-1     1 0.000
#> CAGTTACTAAGGTA-1     4 0.000
#> CAGTTACTGATAGA-1     1 0.000
#> CAGTTGGAAAGAGT-1     2 0.000
#> CAGTTGGACATACG-1     1 0.000
#> CAGTTTACACACGT-1     3 0.000
#> CAGTTTACCCCAAA-1     1 0.000
#> CATAAAACGGAGCA-1     2 0.000
#> CATAAATGAACTGC-1     1 0.000
#> CATAACCTTCTCCG-1     1 0.000
#> CATACTACCTCGAA-1     1 0.000
#> CATACTACCTGAAC-1     1 0.000
#> CATACTACGTACCA-1     2 0.000
#> CATACTTGGGTTAC-1     2 0.000
#> CATAGTCTAATCGC-1     1 0.000
#> CATAGTCTCACTTT-1     1 0.000
#> CATATAGACTAAGC-1     2 0.000
#> CATATAGATCAGGT-1     4 0.000
#> CATCAACTAGAAGT-1     1 0.000
#> CATCAACTCCCTCA-1     1 0.000
#> CATCAGGACTTCCG-1     3 0.000
#> CATCAGGATAGCCA-1     3 0.000
#> CATCAGGATCCTAT-1     2 0.000
#> CATCAGGATGCACA-1     2 0.000
#> CATCAGGATTTCGT-1     2 0.000
#> CATCATACCGCATA-1     2 0.000
#> CATCATACGGAGCA-1     4 0.000
#> CATCATACTCAAGC-1     1 0.000
#> CATCGCTGGGATCT-1     1 0.000
#> CATCGCTGTGGCAT-1     4 0.000
#> CATCGGCTATGCTG-1     1 0.000
#> CATCGGCTTTGGCA-1     1 0.000
#> CATCTCCTATGTGC-1     4 0.000
#> CATCTCCTCGAACT-1     2 0.000
#> CATGAGACACGGGA-1     4 0.000
#> CATGAGACGTTGAC-1     3 0.000
#> CATGAGACTCGCCT-1     1 0.000
#> CATGCCACGGGTGA-1     1 0.000
#> CATGCCACTGCCAA-1     1 0.000
#> CATGCGCTAGTCAC-1     2 0.000
#> CATGCGCTCAGATC-1     2 0.000
#> CATGCGCTTTGCAG-1     2 0.000
#> CATGGCCTAGGGTG-1     2 0.000
#> CATGGCCTGTGCAT-1     1 0.000
#> CATGTACTATCGTG-1     3 0.000
#> CATGTTACAGTCGT-1     3 0.498
#> CATGTTACCTGAGT-1     1 0.000
#> CATGTTTGGGGATG-1     2 0.000
#> CATTACACACGGAG-1     4 0.000
#> CATTACACCAACTG-1     3 0.000
#> CATTACACGGAGTG-1     1 0.000
#> CATTACACTACTCT-1     1 0.000
#> CATTAGCTCCACAA-1     2 0.000
#> CATTGACTAGCGGA-1     2 0.000
#> CATTGGGACTCGAA-1     1 0.000
#> CATTGTACAGCGTT-1     1 0.000
#> CATTGTACTCGATG-1     4 0.000
#> CATTGTACTTATCC-1     1 0.000
#> CATTGTACTTTGCT-1     2 0.000
#> CATTGTTGCTAGTG-1     1 0.000
#> CATTTCGACTCTAT-1     3 0.000
#> CATTTCGAGATACC-1     3 0.000
#> CATTTGACCACACA-1     3 0.000
#> CATTTGACCCTGAA-1     3 1.000
#> CATTTGTGACGACT-1     4 0.000
#> CATTTGTGCATTGG-1     1 0.000
#> CATTTGTGCGGAGA-1     1 0.000
#> CATTTGTGGGATCT-1     4 0.000
#> CCAAAGTGCTACGA-1     2 0.000
#> CCAAAGTGTGAGAA-1     2 0.000
#> CCAACCTGAAGTAG-1     3 0.000
#> CCAACCTGACGTAC-1     2 0.000
#> CCAACCTGTTCGCC-1     2 0.253
#> CCAAGAACCCAATG-1     1 0.000
#> CCAAGAACGTAGCT-1     1 0.000
#> CCAAGAACGTGTCA-1     1 0.000
#> CCAAGAACTACTGG-1     3 0.000
#> CCAAGAACTCCTAT-1     4 0.000
#> CCAAGATGTCATTC-1     1 0.000
#> CCAAGATGTTTCAC-1     1 0.000
#> CCAAGTGAGGAACG-1     1 0.000
#> CCAAGTGATCAAGC-1     1 0.000
#> CCAATTTGAACGTC-1     2 0.000
#> CCACCATGAACGTC-1     1 0.000
#> CCACCATGATCGGT-1     1 0.000
#> CCACCATGGACGAG-1     2 0.000
#> CCACCATGGGGAGT-1     1 0.000
#> CCACCATGTCCTGC-1     3 0.000
#> CCACTGACCCGCTT-1     2 0.000
#> CCACTGTGGGAAGC-1     2 0.000
#> CCACTGTGTGTAGC-1     1 0.000
#> CCACTTCTCGGGAA-1     2 0.000
#> CCAGAAACCCTGTC-1     4 0.000
#> CCAGAAACGAACTC-1     1 0.000
#> CCAGAAACGGTCTA-1     1 0.000
#> CCAGACCTCTGAGT-1     4 0.751
#> CCAGACCTTGTGGT-1     1 0.000
#> CCAGCACTGCGATT-1     2 0.000
#> CCAGCGGAAAGGCG-1     2 0.000
#> CCAGCGGACGACTA-1     2 0.000
#> CCAGCGGATGGGAG-1     1 0.000
#> CCAGCTACACAGTC-1     1 0.000
#> CCAGCTACCAGCTA-1     4 0.000
#> CCAGGTCTACACCA-1     4 0.000
#> CCAGGTCTAGCATC-1     2 0.000
#> CCAGGTCTATGGTC-1     1 0.000
#> CCAGTCACACTGGT-1     2 0.000
#> CCAGTCACACTGTG-1     4 0.000
#> CCAGTCACGTTGTG-1     1 0.000
#> CCAGTGCTAACCAC-1     1 0.000
#> CCAGTGCTCGTAGT-1     1 0.000
#> CCATCCGAAAGCAA-1     1 0.000
#> CCATCCGAACGACT-1     1 0.747
#> CCATCCGAAGGTTC-1     4 0.000
#> CCATCCGATTCGCC-1     2 0.000
#> CCATCGTGAACGGG-1     1 0.000
#> CCATCGTGCTAGAC-1     2 0.000
#> CCCAACACCTCGCT-1     4 0.000
#> CCCAACACGCATCA-1     1 0.000
#> CCCAACACTTTGTC-1     2 0.000
#> CCCAACTGCAATCG-1     2 0.000
#> CCCAGACTGCCTTC-1     2 0.000
#> CCCAGACTGGTTTG-1     4 0.000
#> CCCAGACTTTCGCC-1     2 0.000
#> CCCAGTTGCAGTTG-1     2 0.000
#> CCCAGTTGGGTACT-1     1 0.000
#> CCCAGTTGTCTATC-1     4 0.000
#> CCCGATTGTGTTTC-1     1 0.000
#> CCCGGAGAAGGGTG-1     2 0.000
#> CCCTACGAATTGGC-1     2 0.000
#> CCCTAGTGCAAAGA-1     1 0.000
#> CCCTCAGACACTTT-1     4 0.000
#> CCCTCAGACGAGAG-1     1 0.000
#> CCCTCAGAGGTCAT-1     1 0.000
#> CCCTGAACTAAAGG-1     4 0.000
#> CCCTGATGCAACCA-1     1 0.000
#> CCCTGATGCAAGCT-1     4 0.000
#> CCCTTACTAACCAC-1     2 0.000
#> CCCTTACTGCAGTT-1     1 0.000
#> CCGAAAACCTTGTT-1     2 0.000
#> CCGACACTGGTTTG-1     1 0.000
#> CCGACTACCCAGTA-1     2 0.000
#> CCGACTACCGTGTA-1     1 0.000
#> CCGACTACTGAGGG-1     1 0.000
#> CCGATAGACCTAAG-1     1 0.000
#> CCGATAGAGTTGGT-1     2 0.000
#> CCGCGAGACACACA-1     2 0.000
#> CCGCGAGAGGTTCA-1     1 0.253
#> CCGCTATGGGACGA-1     4 0.000
#> CCGCTATGTGCAAC-1     2 0.000
#> CCGCTATGTGCACA-1     2 0.000
#> CCGGTACTGTCCTC-1     1 0.000
#> CCGTACACAAGCAA-1     1 0.000
#> CCGTACACAGCGTT-1     4 0.000
#> CCGTACACGTCATG-1     3 0.000
#> CCGTACACGTTGGT-1     2 0.000
#> CCGTACACTAACGC-1     1 0.000
#> CCTAAACTTTCGTT-1     1 0.000
#> CCTAAGGACCCAAA-1     1 0.000
#> CCTAAGGACTAGCA-1     2 0.000
#> CCTAAGGAGGGCAA-1     3 0.000
#> CCTAAGGATGATGC-1     1 0.000
#> CCTAAGGATGTCAG-1     1 0.000
#> CCTACCGACTCTTA-1     1 0.000
#> CCTACCGAGGGATG-1     4 0.000
#> CCTAGAGAGGTGAG-1     4 0.000
#> CCTATAACCAAAGA-1     1 0.000
#> CCTATAACGAGACG-1     2 0.000
#> CCTATAACTCAGAC-1     1 0.000
#> CCTATAACTGCATG-1     2 0.000
#> CCTCGAACACTTTC-1     3 0.000
#> CCTCGAACCCGTAA-1     2 0.000
#> CCTCGAACGTATCG-1     1 0.000
#> CCTCGAACTTACTC-1     1 0.000
#> CCTCTACTCTTCGC-1     2 0.000
#> CCTCTACTGGCATT-1     1 0.000
#> CCTGACTGAAGTAG-1     1 1.000
#> CCTGACTGGGGAGT-1     1 0.000
#> CCTGACTGTGTCTT-1     4 0.000
#> CCTGCAACACGTTG-1     2 0.000
#> CCTGGACTCGTGAT-1     1 0.000
#> CCTTAATGCCCAAA-1     4 0.000
#> CCTTAATGTTCTAC-1     2 0.000
#> CCTTCACTACGACT-1     1 0.000
#> CCTTCACTCAGTCA-1     4 0.000
#> CCTTCACTGGAGTG-1     2 0.000
#> CCTTTAGATTCATC-1     2 0.000
#> CGAACATGCCCTAC-1     2 0.000
#> CGAACATGTCAGAC-1     1 0.000
#> CGAAGACTGGAACG-1     1 0.747
#> CGAAGACTGTTACG-1     1 0.000
#> CGAAGGGAAACCTG-1     3 0.000
#> CGAAGGGATCCGAA-1     4 0.000
#> CGAAGTACCAACTG-1     4 0.000
#> CGAATCGAGGAGCA-1     2 0.000
#> CGAATCGAGGAGGT-1     1 0.000
#> CGACAAACCCATAG-1     1 0.000
#> CGACAAACCGACAT-1     4 0.000
#> CGACCACTAAAGTG-1     3 0.000
#> CGACCACTGCCAAT-1     3 0.000
#> CGACCGGAAGGTCT-1     1 0.000
#> CGACCGGATGGAAA-1     1 0.000
#> CGACCTTGCTAGTG-1     1 0.000
#> CGACGTCTATCGTG-1     1 0.000
#> CGACGTCTCGTGTA-1     1 0.000
#> CGACGTCTGAGGCA-1     1 0.000
#> CGACTCACGTCGTA-1     1 0.000
#> CGACTCACGTTGCA-1     1 0.000
#> CGACTCTGTGTGAC-1     1 0.000
#> CGACTGCTTCCTCG-1     2 0.000
#> CGAGAACTAAGGCG-1     3 0.751
#> CGAGAACTACGTTG-1     1 0.000
#> CGAGAACTTGTTCT-1     2 0.000
#> CGAGATTGGACACT-1     3 0.000
#> CGAGATTGGCCATA-1     3 0.000
#> CGAGCCGAACACCA-1     1 0.000
#> CGAGCCGAGGCGAA-1     1 0.000
#> CGAGCGTGCTCCAC-1     1 0.000
#> CGAGCGTGGATACC-1     1 0.000
#> CGAGCGTGTATGCG-1     2 0.000
#> CGAGGAGACCTCCA-1     4 0.000
#> CGAGGAGATGTCGA-1     1 0.000
#> CGAGGCACCTATGG-1     3 0.000
#> CGAGGCACTATGCG-1     2 0.000
#> CGAGGCACTCTTCA-1     1 0.000
#> CGAGGCTGACGCTA-1     3 0.000
#> CGAGGCTGGCAGTT-1     2 0.000
#> CGAGGGCTACGACT-1     4 0.000
#> CGAGGGCTCGAATC-1     1 0.000
#> CGAGTATGTCACCC-1     2 0.000
#> CGATACGAACAGTC-1     2 0.000
#> CGATACGACAGGAG-1     3 0.000
#> CGATACGATTCACT-1     4 0.000
#> CGATAGACCCGTAA-1     2 0.000
#> CGATAGACCGTACA-1     1 1.000
#> CGATAGACGTAGGG-1     2 0.000
#> CGATAGACTGTTCT-1     1 0.000
#> CGATCAGAAGAACA-1     3 0.751
#> CGATCAGAGAGGGT-1     1 0.000
#> CGATCAGAGGTACT-1     1 0.000
#> CGATCAGATGTGAC-1     2 0.000
#> CGATCCACCGGGAA-1     3 0.502
#> CGATCCACTTCCAT-1     4 0.000
#> CGCAAATGCTCGAA-1     1 0.000
#> CGCAACCTCCTTGC-1     1 0.000
#> CGCAACCTGGACGA-1     1 0.000
#> CGCACGGAGGACGA-1     4 0.000
#> CGCACGGATCTTTG-1     1 0.000
#> CGCACTACAGAATG-1     1 0.000
#> CGCACTACAGCCAT-1     1 0.000
#> CGCACTACATTGGC-1     1 0.000
#> CGCACTACTCGCCT-1     4 0.000
#> CGCACTACTCGTGA-1     1 0.747
#> CGCACTTGTCACGA-1     2 0.000
#> CGCAGGACAGATCC-1     1 1.000
#> CGCAGGACCTACTT-1     1 0.000
#> CGCAGGACTTGTCT-1     2 0.000
#> CGCAGGTGCACTGA-1     1 0.000
#> CGCAGGTGCCATAG-1     2 0.000
#> CGCAGGTGGGAACG-1     1 1.000
#> CGCATAGATCACGA-1     2 0.000
#> CGCCATACTGCAAC-1     1 0.000
#> CGCCATTGAGAGGC-1     1 0.000
#> CGCCATTGCTATGG-1     1 0.000
#> CGCCATTGGAGACG-1     1 0.000
#> CGCCATTGGAGCAG-1     4 0.000
#> CGCCATTGTACTGG-1     4 0.000
#> CGCCGAGAGCTTAG-1     3 0.000
#> CGCCTAACGAATGA-1     2 0.000
#> CGCCTAACTGCTCC-1     1 0.000
#> CGCGAGACACAGCT-1     1 0.000
#> CGCGAGACAGGTCT-1     4 0.000
#> CGCGAGACGCTACA-1     1 0.000
#> CGCGATCTCAGTCA-1     2 0.000
#> CGCGATCTGTTGAC-1     2 0.000
#> CGCGATCTTTCTTG-1     4 0.000
#> CGCGGATGGCCAAT-1     1 0.000
#> CGCTAAGAATGTCG-1     1 0.000
#> CGCTAAGACAACTG-1     1 0.000
#> CGCTAAGACCCTTG-1     1 0.000
#> CGCTACTGAACAGA-1     2 0.000
#> CGCTACTGAGAACA-1     1 0.000
#> CGCTACTGTGAGCT-1     1 0.000
#> CGCTACTGTTCCCG-1     3 0.000
#> CGCTCATGCATTTC-1     2 0.000
#> CGGAATTGGTTTGG-1     1 0.000
#> CGGAATTGTGGAGG-1     1 0.000
#> CGGACCGATGCGTA-1     3 0.000
#> CGGACCGATGGGAG-1     1 0.000
#> CGGACTCTAAACAG-1     4 0.000
#> CGGACTCTCCAATG-1     1 0.000
#> CGGACTCTCCTCGT-1     3 0.000
#> CGGAGGCTATTCCT-1     1 0.000
#> CGGAGGCTTGGATC-1     1 0.000
#> CGGATAACAACGAA-1     2 0.000
#> CGGATAACAGCTCA-1     1 0.000
#> CGGATAACTCAGTG-1     2 0.000
#> CGGCACGAACTCAG-1     1 0.249
#> CGGCACGAAGGGTG-1     1 0.000
#> CGGCACGACTACGA-1     2 0.000
#> CGGCATCTTAGAAG-1     1 0.000
#> CGGCATCTTCGTAG-1     2 0.000
#> CGGCCAGAAAGGTA-1     1 0.000
#> CGGCCAGAGAGGCA-1     3 0.000
#> CGGCGAACCAGTCA-1     2 0.000
#> CGGCGAACGACAAA-1     3 0.000
#> CGGCGAACGGTCTA-1     1 0.000
#> CGGCGAACTACTTC-1     3 0.000
#> CGGGACTGCGTGTA-1     1 0.000
#> CGGGACTGGAATAG-1     3 0.000
#> CGGGCATGACCCAA-1     3 0.000
#> CGGGCATGTCTCTA-1     3 0.000
#> CGGGCATGTTGTGG-1     1 0.000
#> CGGTAAACTCGCAA-1     1 0.000
#> CGGTCACTGTTTGG-1     1 0.000
#> CGGTCACTTACTTC-1     1 0.000
#> CGTAACGATCGCCT-1     1 0.000
#> CGTACCACACACAC-1     1 0.000
#> CGTACCACACGTTG-1     1 0.000
#> CGTACCACCTCATT-1     1 0.000
#> CGTACCACGGAGCA-1     1 0.000
#> CGTACCTGGCATCA-1     3 0.000
#> CGTAGCCTCTCTCG-1     2 0.000
#> CGTAGCCTGCGAAG-1     1 0.000
#> CGTAGCCTGTATGC-1     2 0.000
#> CGTCAAGAAAGGTA-1     2 0.000
#> CGTCAAGAACGTGT-1     1 0.000
#> CGTCAAGACAGAGG-1     1 0.000
#> CGTCAAGACAGGAG-1     3 0.000
#> CGTCCATGCTCTTA-1     1 0.000
#> CGTCGACTTTCCGC-1     1 1.000
#> CGTGATGACGCTAA-1     1 0.000
#> CGTGATGAGGTTCA-1     1 0.000
#> CGTGCACTTATGGC-1     2 0.000
#> CGTGTAGAAAAACG-1     1 0.000
#> CGTGTAGACGATAC-1     3 0.000
#> CGTGTAGAGTTACG-1     3 0.000
#> CGTGTAGAGTTCAG-1     2 0.000
#> CGTGTAGATTCGGA-1     3 0.000
#> CGTTAGGAAACCAC-1     1 0.000
#> CGTTAGGATCATTC-1     2 0.000
#> CGTTATACCCTGAA-1     3 0.000
#> CGTTTAACTGGTCA-1     1 0.000
#> CTAAACCTCTGACA-1     3 0.000
#> CTAAACCTGTGCAT-1     4 0.000
#> CTAACACTAACGTC-1     1 0.000
#> CTAACACTAGTGCT-1     2 0.000
#> CTAACGGAACCGAT-1     3 0.000
#> CTAACGGATTTCTG-1     1 0.000
#> CTAACTACGGCAAG-1     1 1.000
#> CTAAGGACACCATG-1     1 0.000
#> CTAAGGACCGTTAG-1     1 0.000
#> CTAAGGACGCCATA-1     2 0.000
#> CTAAGGTGCCTAAG-1     4 0.000
#> CTAAGGTGTTGCAG-1     1 0.000
#> CTAAGGTGTTTCTG-1     1 0.000
#> CTAATAGAGCTATG-1     1 0.000
#> CTAATGCTTGTGGT-1     2 0.000
#> CTACAACTCCCGTT-1     3 0.000
#> CTACCTCTCAACCA-1     1 0.000
#> CTACGCACACCTAG-1     2 0.000
#> CTACGCACTCTCCG-1     1 0.000
#> CTACGCACTGGTCA-1     3 0.000
#> CTACGGCTTTCTTG-1     2 0.000
#> CTACTATGAACCAC-1     2 0.000
#> CTACTATGATGTGC-1     2 0.000
#> CTACTATGCTAAGC-1     1 0.000
#> CTACTATGTAAAGG-1     4 0.000
#> CTACTCCTATGTCG-1     3 0.000
#> CTACTCCTGCCATA-1     2 0.000
#> CTAGAGACACTTTC-1     1 0.000
#> CTAGAGACAGCATC-1     3 0.000
#> CTAGAGACTTTGGG-1     2 0.000
#> CTAGATCTCTCTAT-1     1 0.000
#> CTAGATCTTCGACA-1     1 0.000
#> CTAGGATGAGCCTA-1     4 0.498
#> CTAGGATGATCGTG-1     4 0.000
#> CTAGGCCTCTCAGA-1     1 0.000
#> CTAGGTGATGGTTG-1     2 0.000
#> CTAGTTACCAGAGG-1     1 0.000
#> CTAGTTACCGCATA-1     1 0.000
#> CTAGTTACGAAACA-1     3 0.000
#> CTATAAGATCGTTT-1     4 0.000
#> CTATACTGAGGTTC-1     2 0.000
#> CTATACTGCCAGTA-1     1 0.000
#> CTATACTGCGCTAA-1     2 0.000
#> CTATACTGCTACGA-1     3 0.000
#> CTATACTGTCTCAT-1     3 0.000
#> CTATACTGTTCGTT-1     1 0.502
#> CTATAGCTGTCACA-1     1 0.000
#> CTATAGCTTCGCTC-1     2 0.000
#> CTATAGCTTGCCTC-1     2 0.000
#> CTATCAACGAACTC-1     1 0.000
#> CTATCAACGCAGAG-1     1 0.000
#> CTATCAACTTTGGG-1     1 0.000
#> CTATCCCTCCACCT-1     2 0.000
#> CTATGTACGAGAGC-1     1 0.000
#> CTATGTACGCTTAG-1     1 0.000
#> CTATGTACTGTTTC-1     4 1.000
#> CTATGTTGAAAGCA-1     1 0.000
#> CTATGTTGTCCTCG-1     1 0.000
#> CTATGTTGTCTCGC-1     1 0.000
#> CTATTGACAAACGA-1     2 0.000
#> CTATTGACACTGGT-1     2 0.000
#> CTATTGACGGTGAG-1     2 0.000
#> CTATTGTGGCAAGG-1     1 0.000
#> CTCAATTGGTTCAG-1     1 0.000
#> CTCAATTGGTTGCA-1     2 0.000
#> CTCAGAGATAGAAG-1     1 0.000
#> CTCAGCACTCTAGG-1     1 0.000
#> CTCAGCACTGAACC-1     2 0.000
#> CTCAGCACTTGCAG-1     1 0.000
#> CTCAGCTGAACCTG-1     2 0.000
#> CTCAGCTGCAGTTG-1     1 0.000
#> CTCAGGCTCGTTGA-1     2 0.000
#> CTCAGGCTGCTAAC-1     1 1.000
#> CTCATTGACCTTAT-1     1 0.000
#> CTCATTGATGCTTT-1     2 0.000
#> CTCCACGAGAGATA-1     2 0.000
#> CTCCATCTCTTAGG-1     1 0.000
#> CTCCATCTGACGAG-1     1 0.000
#> CTCCGAACAAGTGA-1     2 0.000
#> CTCCTACTGCCTTC-1     2 0.000
#> CTCGAAGATGTGGT-1     1 0.000
#> CTCGAAGATTAGGC-1     2 0.000
#> CTCGACTGCTCTAT-1     1 0.000
#> CTCGACTGGGTGAG-1     1 0.000
#> CTCGACTGGTTGAC-1     3 0.000
#> CTCGAGCTCTGGAT-1     3 0.000
#> CTCGCATGACTTTC-1     1 0.000
#> CTCGCATGCTTAGG-1     1 0.000
#> CTCTAAACCTCGAA-1     1 0.000
#> CTCTAAACGGCGAA-1     1 0.000
#> CTCTAATGTCCAAG-1     2 0.000
#> CTGAACGACAGTCA-1     1 0.000
#> CTGAACGATGAGGG-1     1 1.000
#> CTGAAGACCCAACA-1     1 0.000
#> CTGAAGACGTGCAT-1     4 0.000
#> CTGAAGTGAAGCCT-1     2 0.000
#> CTGAAGTGCAGCTA-1     4 0.000
#> CTGAAGTGGCTATG-1     1 0.000
#> CTGAAGTGTCCAGA-1     1 0.000
#> CTGAATCTGAATAG-1     1 0.498
#> CTGACAGAATCGTG-1     3 0.000
#> CTGACCACAGCAAA-1     1 0.000
#> CTGAGAACCGGGAA-1     1 0.000
#> CTGAGAACGTAAAG-1     3 0.000
#> CTGATACTAGTAGA-1     1 0.000
#> CTGATTTGGTGTTG-1     2 0.000
#> CTGCAGCTAACCGT-1     1 0.000
#> CTGCAGCTGACACT-1     1 0.000
#> CTGCAGCTGGATTC-1     2 0.000
#> CTGCAGCTTGGCAT-1     1 0.000
#> CTGCCAACAGGAGC-1     1 0.000
#> CTGCCAACCAGCTA-1     1 0.000
#> CTGCCAACTAACCG-1     2 0.000
#> CTGCCAACTGCTCC-1     3 1.000
#> CTGCCAACTTGCAG-1     1 0.000
#> CTGCCAACTTGCTT-1     1 0.000
#> CTGCGACTCCACCT-1     3 1.000
#> CTGGAAACAAACGA-1     3 0.000
#> CTGGAAACATCGAC-1     1 0.000
#> CTGGATGACTGGAT-1     3 0.000
#> CTGGATGACTTGTT-1     1 1.000
#> CTGGATGATGTGAC-1     4 0.000
#> CTGGCACTCAAGCT-1     2 0.000
#> CTGTAACTAACCAC-1     1 0.000
#> CTGTAACTAGCGTT-1     1 0.000
#> CTGTATACGTAAAG-1     1 0.000
#> CTGTATACGTACGT-1     2 0.000
#> CTGTATACGTTGGT-1     1 0.000
#> CTGTGAGACAACCA-1     2 0.000
#> CTGTGAGACCTTGC-1     3 0.000
#> CTGTGAGACGAACT-1     2 0.000
#> CTGTGAGACTGTAG-1     2 0.000
#> CTTAAAGAACCTGA-1     1 0.000
#> CTTAACACCTGTAG-1     1 0.000
#> CTTAACACTATCGG-1     4 0.000
#> CTTAAGCTACCTAG-1     1 0.000
#> CTTAAGCTAGTACC-1     1 0.000
#> CTTAAGCTCATCAG-1     1 0.000
#> CTTAAGCTCCGCTT-1     4 0.000
#> CTTACAACTAACGC-1     1 0.000
#> CTTACAACTCCCGT-1     2 0.000
#> CTTACTGACGTACA-1     1 0.000
#> CTTAGACTAAACGA-1     1 0.000
#> CTTAGGGACTTGCC-1     1 0.000
#> CTTAGGGAGAATCC-1     1 0.000
#> CTTATCGACTCATT-1     1 0.000
#> CTTCACCTACCTGA-1     2 0.000
#> CTTCATGAAGCATC-1     4 0.000
#> CTTCATGAAGTACC-1     1 0.000
#> CTTCATGACCGAAT-1     1 0.000
#> CTTGAACTACGCAT-1     1 0.000
#> CTTGATTGAGGTTC-1     3 0.000
#> CTTGATTGATCTTC-1     2 0.000
#> CTTGATTGCATTCT-1     1 0.000
#> CTTGATTGTTTCGT-1     1 0.000
#> CTTGTATGACACCA-1     4 0.000
#> CTTGTATGCGCAAT-1     4 0.000
#> CTTTACGAGCGAAG-1     1 0.000
#> CTTTAGACCGTGAT-1     1 0.000
#> CTTTAGACGAGACG-1     1 0.000
#> CTTTAGACGATACC-1     1 0.000
#> CTTTAGACGTTGGT-1     1 0.000
#> CTTTAGACTCATTC-1     1 0.249
#> CTTTAGTGACGGGA-1     3 0.000
#> CTTTAGTGGGTGGA-1     1 0.000
#> CTTTCAGAGAAACA-1     1 0.000
#> CTTTGATGAGCACT-1     1 0.000
#> CTTTGATGTCTAGG-1     1 0.000
#> CTTTGATGTGTCCC-1     1 0.000
#> CTTTGATGTGTGGT-1     1 0.000
#> GAAACAGAACTACG-1     1 0.000
#> GAAACAGAATCACG-1     1 0.000
#> GAAACAGACATTCT-1     1 0.000
#> GAAACCTGATCGTG-1     1 0.000
#> GAAACCTGATGCCA-1     1 0.000
#> GAAACCTGCTTATC-1     1 0.000
#> GAAACCTGGACTAC-1     2 0.000
#> GAAACCTGTGCTAG-1     1 0.000
#> GAAAGATGATTTCC-1     1 0.000
#> GAAAGATGCTGATG-1     2 0.000
#> GAAAGATGCTTCGC-1     2 0.000
#> GAAAGATGTAAGGA-1     1 0.502
#> GAAAGCCTACGTTG-1     4 0.000
#> GAAAGTGAAAGTGA-1     2 0.000
#> GAAAGTGACCACAA-1     2 0.000
#> GAAAGTGACTCAAG-1     1 0.000
#> GAAATACTACCAAC-1     2 0.502
#> GAAATACTCTTAGG-1     4 0.000
#> GAAATACTTCCTCG-1     3 0.000
#> GAACACACGTGCAT-1     2 0.000
#> GAACACACTGCCTC-1     1 0.000
#> GAACAGCTAACTGC-1     2 0.000
#> GAACAGCTCTCAGA-1     2 0.000
#> GAACCAACCACAAC-1     1 0.000
#> GAACCAACTTCCGC-1     3 0.000
#> GAACCTGAACGTGT-1     1 0.000
#> GAACCTGAGAGACG-1     1 0.000
#> GAACCTGATGAACC-1     1 0.000
#> GAACGGGATACTTC-1     1 0.000
#> GAACTGTGACCTGA-1     2 0.000
#> GAACTGTGCCAGTA-1     2 0.000
#> GAAGAATGCAATCG-1     1 0.000
#> GAAGCGGACCTATT-1     2 0.000
#> GAAGCTACGAATGA-1     2 0.000
#> GAAGCTACGGTTTG-1     3 0.000
#> GAAGGGTGAAAGTG-1     1 0.000
#> GAAGGGTGCTTAGG-1     2 0.000
#> GAAGGTCTGAAAGT-1     3 0.747
#> GAAGGTCTGTTGCA-1     1 0.000
#> GAAGGTCTTAAAGG-1     2 0.000
#> GAAGTAGACTCCCA-1     3 0.000
#> GAAGTAGATCCAAG-1     2 0.000
#> GAAGTCACCCTCGT-1     2 0.000
#> GAAGTCACCCTGTC-1     4 0.000
#> GAAGTCTGTCGCAA-1     4 0.000
#> GAAGTCTGTTCTGT-1     1 0.000
#> GAAGTGCTAAACGA-1     3 0.000
#> GAAGTGCTCCGCTT-1     2 0.000
#> GAAGTGCTTAACCG-1     1 0.000
#> GAATGCACCCTAAG-1     1 0.000
#> GAATGCACCTTCGC-1     3 0.000
#> GAATGCTGCGGTAT-1     1 0.000
#> GAATTAACGATAAG-1     1 0.000
#> GAATTAACGGTCAT-1     1 0.000
#> GAATTAACGTCGTA-1     3 0.000
#> GAATTAACTGAAGA-1     4 0.000
#> GACAACACAGGCGA-1     1 0.000
#> GACAACACATCGTG-1     1 0.000
#> GACAACACTCGCCT-1     1 0.000
#> GACAACTGAGGTTC-1     1 0.000
#> GACAGGGAAGAGTA-1     4 0.000
#> GACAGGGAATGCCA-1     1 0.000
#> GACAGTACGAGCTT-1     2 0.000
#> GACAGTACTTCGGA-1     2 0.000
#> GACAGTTGAGTAGA-1     4 0.000
#> GACATTCTCCACCT-1     2 0.000
#> GACCAAACGACTAC-1     2 0.000
#> GACCAAACGTATCG-1     2 0.000
#> GACCCTACTAAAGG-1     4 0.000
#> GACCTAGACCTCAC-1     1 0.498
#> GACCTAGACGAGAG-1     1 0.000
#> GACCTCACAAGGTA-1     1 0.000
#> GACCTCACGTACGT-1     2 0.000
#> GACCTCTGCATCAG-1     1 0.000
#> GACGAACTCCCACT-1     1 0.000
#> GACGATTGCCAATG-1     4 0.000
#> GACGCCGACCTTCG-1     1 0.000
#> GACGCTCTCTCTCG-1     3 0.000
#> GACGGCACACGGGA-1     3 0.000
#> GACGGCACGAGATA-1     2 0.000
#> GACGTAACCTATGG-1     1 0.000
#> GACGTAACCTGTGA-1     1 0.000
#> GACGTAACTATGGC-1     1 0.000
#> GACGTATGTTGACG-1     1 0.000
#> GACGTATGTTTGCT-1     1 0.000
#> GACGTCCTACGGAG-1     1 0.000
#> GACGTCCTCTCAAG-1     2 0.000
#> GACGTCCTGATAAG-1     4 0.000
#> GACTACGATGGTCA-1     4 0.000
#> GACTCCTGCTCGCT-1     1 0.000
#> GACTCCTGGGTTAC-1     1 0.000
#> GACTCCTGTTATCC-1     1 0.498
#> GACTCCTGTTGGTG-1     2 0.000
#> GACTGAACCAATCG-1     2 0.000
#> GACTGATGTGATGC-1     1 0.000
#> GACTTTACATGCCA-1     1 0.000
#> GACTTTACGACAGG-1     4 0.000
#> GAGAAATGTTCTCA-1     4 0.000
#> GAGATAGAAAAAGC-1     2 0.000
#> GAGATCACGACAAA-1     2 0.000
#> GAGATGCTCTGGAT-1     3 1.000
#> GAGATGCTGAATGA-1     1 0.249
#> GAGCAGGATTCCCG-1     3 0.751
#> GAGCATACTTTGCT-1     2 0.000
#> GAGCGCACGCGTAT-1     2 0.000
#> GAGCGCACGGTGAG-1     1 0.000
#> GAGCGCTGAAGATG-1     3 0.000
#> GAGCGCTGTCTTAC-1     2 0.000
#> GAGCGGCTGGGAGT-1     4 0.000
#> GAGGACGACTCAGA-1     1 0.000
#> GAGGATCTGAAAGT-1     4 0.000
#> GAGGCAGACTTGCC-1     3 0.000
#> GAGGGAACACCAGT-1     1 0.000
#> GAGGGAACGAGGGT-1     1 1.000
#> GAGGGATGGGAAAT-1     1 0.249
#> GAGGGCCTTCACCC-1     1 0.000
#> GAGGGTGAAGAGTA-1     1 0.000
#> GAGGTACTACGGTT-1     1 0.000
#> GAGGTACTACTCAG-1     2 0.000
#> GAGGTACTGACACT-1     3 0.000
#> GAGGTACTGGGAGT-1     1 0.000
#> GAGGTACTTAGCGT-1     2 0.000
#> GAGGTGGAGTACGT-1     1 0.000
#> GAGGTGGATCCTCG-1     3 0.000
#> GAGGTTACTCGTTT-1     2 0.000
#> GAGGTTTGTAAGCC-1     2 0.000
#> GAGTCAACCATTCT-1     1 0.000
#> GAGTCAACGGGAGT-1     1 0.000
#> GAGTCTGATCGTGA-1     1 0.000
#> GAGTCTGATTTGGG-1     4 0.000
#> GAGTGACTCAGCTA-1     3 0.498
#> GAGTGACTCGGTAT-1     3 0.000
#> GAGTGACTCTTGCC-1     4 0.000
#> GAGTGACTGACTAC-1     4 0.000
#> GAGTGACTGTCTAG-1     1 0.000
#> GAGTGGGAGTCTTT-1     4 0.000
#> GAGTGGGATGCCCT-1     1 0.000
#> GAGTGGGATGCTGA-1     4 0.000
#> GAGTGTTGCTGTAG-1     1 0.000
#> GAGTGTTGTGGTCA-1     1 0.000
#> GAGTTGTGCATGGT-1     2 0.000
#> GAGTTGTGCTGAGT-1     3 0.000
#> GAGTTGTGGCGAGA-1     2 0.000
#> GAGTTGTGGTAGCT-1     3 0.000
#> GAGTTGTGTATGCG-1     2 0.000
#> GATAAGGAGAAACA-1     2 0.000
#> GATAAGGATTCACT-1     2 0.000
#> GATACTCTATCGGT-1     1 0.000
#> GATACTCTTACTTC-1     1 0.000
#> GATACTCTTGACTG-1     2 0.000
#> GATAGAGAAGGGTG-1     3 0.000
#> GATAGAGACTGTGA-1     1 0.000
#> GATAGAGATCACGA-1     2 0.000
#> GATAGCACCCATAG-1     1 0.000
#> GATAGCACGAAGGC-1     2 0.000
#> GATAGCACTTGTCT-1     1 0.000
#> GATATAACAAGGTA-1     1 0.000
#> GATATAACACGCAT-1     1 0.000
#> GATATATGCTGGAT-1     1 0.000
#> GATATATGTCCGTC-1     3 0.000
#> GATATATGTGGAGG-1     2 0.000
#> GATATCCTAGAAGT-1     1 0.000
#> GATATCCTCCCGTT-1     2 0.000
#> GATATTGACAGGAG-1     3 0.751
#> GATATTGACGAGTT-1     2 0.000
#> GATATTGAGCCAAT-1     1 0.000
#> GATCCCTGACCTTT-1     3 0.000
#> GATCCCTGTGTAGC-1     3 0.000
#> GATCCGCTGGTCAT-1     2 0.000
#> GATCGAACCGAGAG-1     1 0.000
#> GATCGATGACTAGC-1     4 0.000
#> GATCGATGGTAAAG-1     4 0.000
#> GATCGATGTAAGGA-1     2 0.000
#> GATCGTGACACTAG-1     1 0.000
#> GATCGTGATTCACT-1     1 0.000
#> GATCTACTGGTGAG-1     1 1.000
#> GATCTACTTTGCAG-1     4 0.000
#> GATCTTACACCCAA-1     2 0.000
#> GATCTTACCCTACC-1     1 0.000
#> GATCTTACGAATAG-1     2 0.000
#> GATCTTACGAGATA-1     2 0.000
#> GATGCAACTCCAGA-1     1 0.000
#> GATGCCCTACGTAC-1     1 0.000
#> GATGCCCTCTCATT-1     1 0.000
#> GATGCCCTGGCAAG-1     2 0.000
#> GATGCCCTTTTGCT-1     1 0.000
#> GATTACCTTGTTCT-1     1 0.000
#> GATTCGGAACGACT-1     1 0.000
#> GATTCGGACAGGAG-1     2 0.000
#> GATTCGGAGAAGGC-1     2 0.000
#> GATTCTTGATTCGG-1     2 0.000
#> GATTCTTGCCGATA-1     1 0.000
#> GATTCTTGCGAGTT-1     4 0.000
#> GATTGGACCCGTTC-1     4 0.751
#> GATTGGACGGTGTT-1     4 0.000
#> GATTGGACTTTCGT-1     4 0.000
#> GATTGGTGTGTCAG-1     1 0.000
#> GATTTAGACACTCC-1     2 0.000
#> GATTTAGACTAAGC-1     4 0.000
#> GATTTAGATTCGTT-1     2 1.000
#> GATTTGCTAACGAA-1     1 0.000
#> GATTTGCTAACGGG-1     2 0.000
#> GCAACCCTCCTCGT-1     2 0.000
#> GCAACTGATTGCGA-1     1 0.000
#> GCAAGACTACTGGT-1     1 0.000
#> GCAAGACTAGGTCT-1     1 0.000
#> GCAAGACTCCCTTG-1     1 0.000
#> GCAATCGACTGCAA-1     1 0.000
#> GCAATCGAGACGTT-1     2 0.000
#> GCAATCGATCCTTA-1     2 0.000
#> GCAATTCTCGTGTA-1     1 0.000
#> GCAATTCTTCTCCG-1     1 0.000
#> GCACAAACAATGCC-1     1 0.000
#> GCACAAACGGTACT-1     1 0.000
#> GCACAATGGTGCAT-1     2 0.000
#> GCACACCTGTGCTA-1     3 0.000
#> GCACCACTCATGAC-1     2 0.000
#> GCACCACTGTTTGG-1     2 0.000
#> GCACCACTTCCTTA-1     3 0.000
#> GCACCACTTTCGGA-1     2 0.000
#> GCACCTACGCGATT-1     1 0.000
#> GCACCTTGGCTGTA-1     1 0.000
#> GCACCTTGGGGAGT-1     2 0.000
#> GCACGGACCAGCTA-1     1 0.000
#> GCACGGTGACCTCC-1     1 0.000
#> GCACGGTGCTATGG-1     2 0.000
#> GCACTAGAACGGGA-1     1 0.000
#> GCACTAGAAGATGA-1     4 0.000
#> GCACTAGACCTTTA-1     2 0.000
#> GCACTAGACGTAAC-1     4 0.000
#> GCACTAGAGTCGTA-1     3 0.000
#> GCACTAGATGCAAC-1     1 0.000
#> GCACTGCTGAGGCA-1     1 0.000
#> GCAGATACAGCGTT-1     1 0.000
#> GCAGATACGACGGA-1     1 0.000
#> GCAGATACGCAGAG-1     1 0.000
#> GCAGCCGACAGTCA-1     1 0.000
#> GCAGCGTGCACTCC-1     1 0.000
#> GCAGCTCTCAATCG-1     1 0.000
#> GCAGCTCTGTTTCT-1     1 0.000
#> GCAGGGCTAAGAAC-1     1 0.000
#> GCAGGGCTAAGGGC-1     1 0.000
#> GCAGGGCTATCGAC-1     3 0.000
#> GCAGGGCTTGGGAG-1     3 1.000
#> GCAGTCCTAACTGC-1     1 0.000
#> GCAGTCCTCTCTTA-1     1 0.000
#> GCATCAGATGCGTA-1     1 0.000
#> GCATGTGACAAGCT-1     1 0.000
#> GCATTGGAGAAGGC-1     1 0.000
#> GCCAAAACGAGGCA-1     3 1.000
#> GCCAAATGATCGAC-1     1 0.000
#> GCCAACCTACGGTT-1     1 0.000
#> GCCAACCTCGCCTT-1     1 0.000
#> GCCACGGAGGCGAA-1     2 0.000
#> GCCACGGATACTGG-1     1 0.000
#> GCCACTACGTCTTT-1     1 0.000
#> GCCCAACTACCGAT-1     1 0.000
#> GCCCAACTATGGTC-1     3 1.000
#> GCCCATACAGCGTT-1     3 0.751
#> GCCGACGAACTCTT-1     2 0.000
#> GCCGAGTGCGTTGA-1     1 0.000
#> GCCGGAACGAACTC-1     3 0.751
#> GCCGGAACGTTCTT-1     3 0.000
#> GCCGGAACTGCACA-1     3 0.000
#> GCCGGAACTTACTC-1     1 0.000
#> GCCGTACTACCTGA-1     1 0.000
#> GCCGTACTGGCAAG-1     2 0.000
#> GCCTACACAGTTCG-1     3 0.000
#> GCCTACACCACTGA-1     2 0.000
#> GCCTACACCTTGAG-1     1 0.000
#> GCCTAGCTACGGAG-1     4 0.000
#> GCCTAGCTCTATTC-1     1 0.000
#> GCCTAGCTTCTCAT-1     1 0.000
#> GCCTAGCTTCTCTA-1     2 0.000
#> GCCTCAACCATGGT-1     1 0.000
#> GCCTCAACTCTTTG-1     3 0.000
#> GCCTCATGTCTTAC-1     1 0.000
#> GCCTGACTCTCAAG-1     2 0.000
#> GCGAAGGAACTCTT-1     1 0.000
#> GCGAAGGATGCCAA-1     1 0.000
#> GCGAGAGAGGGACA-1     1 0.000
#> GCGAGCACTGTCGA-1     4 0.253
#> GCGAGCACTTGACG-1     1 0.000
#> GCGAGCACTTGCTT-1     2 0.000
#> GCGATATGGTACGT-1     1 0.000
#> GCGATATGGTGTTG-1     1 0.000
#> GCGCACGAAGTCGT-1     1 0.000
#> GCGCACGACTTTAC-1     2 0.000
#> GCGCATCTAGGTCT-1     1 0.000
#> GCGCATCTGGTTAC-1     1 0.751
#> GCGCATCTTCGATG-1     1 0.000
#> GCGCATCTTGCTCC-1     3 0.000
#> GCGCATCTTTCTAC-1     1 0.000
#> GCGCGAACGTTCTT-1     4 0.000
#> GCGCGATGAACGGG-1     1 0.000
#> GCGCGATGGTGCAT-1     3 0.000
#> GCGGAGCTCCTGAA-1     1 0.000
#> GCGGCAACCCGATA-1     1 0.000
#> GCGGCAACGGAGGT-1     4 0.000
#> GCGGCAACTGTCGA-1     2 0.000
#> GCGTAAACACGGTT-1     2 0.000
#> GCGTAATGCACCAA-1     2 0.000
#> GCGTATGAACACCA-1     1 0.000
#> GCGTATGATGAGAA-1     2 0.000
#> GCTACAGAAAGGTA-1     1 0.000
#> GCTACAGAATCTTC-1     4 0.000
#> GCTACCTGAGAAGT-1     2 0.000
#> GCTACCTGATCACG-1     1 0.000
#> GCTACGCTAGAATG-1     1 0.000
#> GCTACGCTAGCTAC-1     1 0.000
#> GCTACGCTCCCTAC-1     1 0.000
#> GCTAGAACAGAGGC-1     4 0.000
#> GCTAGAACGGATCT-1     1 0.000
#> GCTAGAACTCCCGT-1     1 0.000
#> GCTAGATGAGCTCA-1     2 0.000
#> GCTAGATGGCGATT-1     3 1.000
#> GCTATACTAAGGCG-1     1 0.000
#> GCTATACTAGCGTT-1     3 0.000
#> GCTATACTCTCTTA-1     1 0.000
#> GCTATACTGGACGA-1     1 0.000
#> GCTCAAGAACCATG-1     2 0.000
#> GCTCAAGAAGTCAC-1     2 0.000
#> GCTCAGCTGTCTAG-1     1 0.000
#> GCTCCATGAGAAGT-1     3 0.000
#> GCTCCATGCCGAAT-1     1 0.000
#> GCTCGACTCTAGTG-1     2 0.000
#> GCTGATGAGGTATC-1     2 0.000
#> GCTTAACTACAGTC-1     2 0.000
#> GCTTAACTACTGGT-1     3 0.000
#> GCTTAACTGCTGAT-1     1 0.000
#> GCTTAACTTAGACC-1     2 0.000
#> GCTTAACTTCAGTG-1     1 0.000
#> GGAACACTCACTTT-1     2 0.000
#> GGAACACTTCAGAC-1     3 0.000
#> GGAACTACTACTTC-1     1 0.000
#> GGAACTTGAAGGTA-1     2 0.000
#> GGAACTTGAGAATG-1     1 0.000
#> GGAACTTGCTCCAC-1     2 0.000
#> GGAACTTGGGTAGG-1     4 0.000
#> GGAAGGACATCGGT-1     2 0.000
#> GGAAGGACCACTAG-1     1 0.000
#> GGAAGGACGAGGGT-1     1 0.000
#> GGAAGGACGCGAAG-1     1 0.253
#> GGAAGGTGGCGAGA-1     3 0.000
#> GGAATCTGAAGGGC-1     1 0.000
#> GGAATCTGAGGAGC-1     1 0.000
#> GGAATCTGCTTAGG-1     4 0.000
#> GGAATCTGCTTGTT-1     2 0.000
#> GGAATCTGGGAGGT-1     1 0.000
#> GGAATGCTTTCTAC-1     1 0.000
#> GGACAGGAAAGGGC-1     1 0.000
#> GGACAGGAGTGCTA-1     4 0.000
#> GGACAGGATCTCGC-1     1 0.000
#> GGACCCGAAGCTAC-1     2 0.000
#> GGACCGTGCTTACT-1     2 0.000
#> GGACCGTGGGAACG-1     2 0.000
#> GGACCGTGTAACGC-1     1 0.000
#> GGACCTCTGTAAGA-1     2 0.000
#> GGACCTCTTTTCTG-1     3 0.000
#> GGACGAGAGTGTCA-1     2 0.000
#> GGACGCTGACGCAT-1     1 0.502
#> GGACGCTGCTAGCA-1     1 0.000
#> GGACGCTGTCCTCG-1     3 0.000
#> GGAGAGACGTGAGG-1     1 1.000
#> GGAGCAGATTCAGG-1     4 0.000
#> GGAGCCACCTTCTA-1     4 0.000
#> GGAGCGCTACGCAT-1     2 0.000
#> GGAGCGCTCCGAAT-1     1 0.000
#> GGAGGATGCCACCT-1     1 0.000
#> GGAGGATGGTTGAC-1     2 0.000
#> GGAGGATGTCAGTG-1     2 0.000
#> GGAGGCCTCGTTGA-1     3 0.000
#> GGAGGCCTTTCTTG-1     1 0.000
#> GGAGGTGATACGCA-1     1 0.000
#> GGAGGTGATCGCTC-1     1 0.000
#> GGATACTGCAGCTA-1     1 0.000
#> GGATACTGTCTAGG-1     1 0.000
#> GGATAGCTCGTCTC-1     1 0.000
#> GGATAGCTCTGAAC-1     1 1.000
#> GGATGTACCAAAGA-1     4 0.000
#> GGATGTACGCGAAG-1     1 0.000
#> GGATGTACGTCTTT-1     2 0.253
#> GGATGTACGTGTCA-1     3 1.000
#> GGATTTCTAGGTTC-1     1 0.000
#> GGATTTCTTTGTCT-1     2 0.000
#> GGCAAGGAAAAAGC-1     3 0.000
#> GGCAAGGAAGAAGT-1     1 0.000
#> GGCAAGGACTTGGA-1     2 0.000
#> GGCAAGGAGGACTT-1     1 0.000
#> GGCAATACGCTAAC-1     4 0.000
#> GGCAATACGGCATT-1     1 1.000
#> GGCAATACGTTTCT-1     4 0.000
#> GGCACGTGGCTTAG-1     2 0.000
#> GGCACTCTTTTGTC-1     1 0.000
#> GGCATATGCTTATC-1     3 0.000
#> GGCATATGGGGAGT-1     3 0.000
#> GGCATATGTGTGAC-1     1 0.000
#> GGCCACGACAGAGG-1     1 0.249
#> GGCCAGACTGGTTG-1     1 0.000
#> GGCCCAGAAAGTAG-1     2 0.000
#> GGCCGAACAACGAA-1     1 0.000
#> GGCCGAACGCAGAG-1     1 0.000
#> GGCCGAACGTAGGG-1     1 0.000
#> GGCCGAACTCTAGG-1     3 0.000
#> GGCCGATGCAGGAG-1     1 0.000
#> GGCCGATGCCGAAT-1     1 0.000
#> GGCCGATGTACTCT-1     1 0.000
#> GGCGACACTGCCCT-1     3 1.000
#> GGCGACTGCGTAAC-1     1 0.000
#> GGCGCATGCCTAAG-1     2 0.000
#> GGCGCATGCTCCAC-1     1 0.000
#> GGCGCATGTGGAAA-1     1 0.000
#> GGCGGACTAGAGGC-1     1 0.498
#> GGCGGACTAGGAGC-1     3 0.751
#> GGCGGACTCTGACA-1     1 0.000
#> GGCGGACTCTTGGA-1     3 0.000
#> GGCGGACTTACTGG-1     1 0.000
#> GGCGGACTTGAACC-1     1 0.000
#> GGCTAAACACCTGA-1     3 0.000
#> GGCTAAACTCTTAC-1     1 0.000
#> GGCTAATGAGCACT-1     3 0.000
#> GGCTAATGGTCTAG-1     1 0.000
#> GGCTCACTACTCAG-1     2 0.000
#> GGGAACGAAGCTCA-1     2 0.000
#> GGGAACGACACAAC-1     4 0.000
#> GGGAACGAGTGTCA-1     2 0.000
#> GGGAAGTGTTGAGC-1     2 0.000
#> GGGACCACACGTTG-1     3 0.000
#> GGGACCACAGAACA-1     1 0.000
#> GGGACCACGAATAG-1     1 0.000
#> GGGACCACGTCATG-1     1 0.000
#> GGGACCACTCAAGC-1     1 0.000
#> GGGACCACTCGTGA-1     1 0.000
#> GGGACCACTGCATG-1     1 0.000
#> GGGACCTGACCCTC-1     2 0.000
#> GGGACCTGCTTGCC-1     1 0.000
#> GGGACCTGTGGAGG-1     4 0.000
#> GGGATGGACGACAT-1     4 0.000
#> GGGATGGATACTTC-1     1 0.000
#> GGGATGGATGGTTG-1     2 0.000
#> GGGATTACGTCTAG-1     1 0.000
#> GGGCAAGATGCATG-1     2 0.000
#> GGGCACACGGTGAG-1     2 0.000
#> GGGCACACGTTGCA-1     1 0.000
#> GGGCAGCTTGGGAG-1     1 1.000
#> GGGCAGCTTTTCTG-1     1 0.000
#> GGGCCAACCTTGGA-1     2 0.502
#> GGGCCAACGCGTTA-1     4 0.000
#> GGGCCAACTACGCA-1     2 0.000
#> GGGCCAACTCCAAG-1     4 0.000
#> GGGCCATGATGGTC-1     1 0.000
#> GGGCCATGTTGACG-1     1 0.747
#> GGGTAACTCAGCTA-1     1 0.000
#> GGGTAACTCTAGTG-1     4 0.000
#> GGGTAACTCTGGAT-1     1 0.000
#> GGGTTAACGTGCAT-1     3 0.000
#> GGTAAAGAGCTAAC-1     3 0.000
#> GGTACAACTGCAAC-1     1 0.000
#> GGTACATGAAAGCA-1     4 0.000
#> GGTACATGAGCTCA-1     1 0.000
#> GGTACATGCGGTAT-1     1 0.000
#> GGTACATGGTTACG-1     1 0.000
#> GGTACATGTGGGAG-1     1 0.000
#> GGTACTGAACTCTT-1     2 0.000
#> GGTAGTACACCACA-1     1 0.000
#> GGTAGTACACTAGC-1     2 0.000
#> GGTAGTACCCTGTC-1     1 0.000
#> GGTAGTACGCCATA-1     2 0.000
#> GGTAGTACTGTCTT-1     1 0.000
#> GGTATCGAGACAAA-1     2 0.751
#> GGTATCGATGAACC-1     4 0.000
#> GGTCAAACCAAAGA-1     1 0.000
#> GGTCTAGAGAAACA-1     2 0.000
#> GGTCTAGATAGCGT-1     2 0.000
#> GGTGATACCGACTA-1     4 0.000
#> GGTGATACGACTAC-1     2 0.000
#> GGTGATACTGTTTC-1     1 0.000
#> GGTGGAGAAACGGG-1     3 0.000
#> GGTGGAGAAGTAGA-1     1 0.000
#> GGTGGAGACAGATC-1     3 0.000
#> GGTGGAGATCGATG-1     1 0.000
#> GGTGGAGATCTCTA-1     2 0.000
#> GGTGGAGATTACTC-1     3 0.000
#> GGTTTACTACGCAT-1     3 0.000
#> GTAACGTGACCTCC-1     2 0.000
#> GTAACGTGATCGGT-1     4 0.000
#> GTAACGTGCAGCTA-1     4 0.000
#> GTAACGTGGTTGAC-1     4 0.000
#> GTAAGCACAACGGG-1     1 0.000
#> GTAAGCACTCATTC-1     4 0.000
#> GTAAGCTGGTACCA-1     2 0.000
#> GTAATAACCTTCTA-1     2 0.000
#> GTAATAACGTTGTG-1     1 0.000
#> GTACCCTGACAGTC-1     2 0.000
#> GTACCCTGGAGCTT-1     1 0.000
#> GTACCCTGTCCTTA-1     3 0.000
#> GTACCCTGTGAACC-1     1 0.000
#> GTACGTGAACGTTG-1     3 0.253
#> GTACTTTGTCGACA-1     1 0.747
#> GTAGACTGAGATGA-1     2 0.000
#> GTAGACTGTATTCC-1     1 0.000
#> GTAGCAACAGTCGT-1     2 0.000
#> GTAGCAACCATTTC-1     4 0.000
#> GTAGCAACGGTAGG-1     2 0.000
#> GTAGCATGCACTCC-1     4 0.000
#> GTAGCATGTAAGCC-1     2 0.000
#> GTAGCCCTGACGTT-1     1 0.000
#> GTAGCTGAAGCTAC-1     2 0.000
#> GTAGCTGAATTCGG-1     1 0.000
#> GTAGGTACACGGGA-1     2 0.000
#> GTAGTGACCTCATT-1     1 0.000
#> GTAGTGTGAGCGGA-1     3 0.000
#> GTAGTGTGAGGCGA-1     2 0.000
#> GTAGTGTGTGGTTG-1     1 0.000
#> GTATCACTGGTAGG-1     2 0.000
#> GTATCTACAGAAGT-1     3 0.000
#> GTATCTACGACGAG-1     3 0.253
#> GTATCTACGTTACG-1     1 0.000
#> GTATTAGAAACAGA-1     3 0.000
#> GTATTAGAGGTCTA-1     1 0.000
#> GTATTCACACAGCT-1     1 0.000
#> GTATTCACGGGTGA-1     3 0.000
#> GTCAACGACACTGA-1     1 0.000
#> GTCAACGAGTGTAC-1     2 0.000
#> GTCAATCTACACCA-1     1 0.000
#> GTCAATCTGTAGCT-1     3 0.249
#> GTCAATCTTGTGGT-1     1 0.000
#> GTCACCTGCCTCCA-1     1 0.000
#> GTCACCTGTCCCGT-1     1 0.000
#> GTCATACTAATCGC-1     4 0.000
#> GTCATACTGCGATT-1     3 0.000
#> GTCATACTTCGCCT-1     3 0.000
#> GTCATACTTTACCT-1     3 0.747
#> GTCATACTTTGACG-1     1 0.000
#> GTCCAAGAAAAACG-1     1 0.000
#> GTCCACTGACCTCC-1     1 0.000
#> GTCCACTGGGTACT-1     2 0.000
#> GTCCAGCTACGGGA-1     1 0.000
#> GTCCCATGTGGTGT-1     2 0.000
#> GTCGAATGAAGGCG-1     2 0.000
#> GTCGACCTGAATGA-1     3 0.000
#> GTCGACCTGTTCAG-1     1 0.000
#> GTCGCACTTGAGAA-1     4 0.000
#> GTCTAACTGGTCTA-1     2 0.000
#> GTCTAGGAGCTTCC-1     2 0.000
#> GTGAACACACTCTT-1     1 0.000
#> GTGAACACTCAGGT-1     1 0.000
#> GTGACCCTTAAGCC-1     1 0.000
#> GTGATGACAAGTGA-1     1 0.000
#> GTGATGACCTGAGT-1     4 0.000
#> GTGATGACGGTTTG-1     1 0.000
#> GTGATTCTCATTTC-1     1 0.000
#> GTGATTCTCTCTCG-1     2 0.000
#> GTGATTCTGGTTCA-1     3 0.000
#> GTGATTCTGTCGAT-1     1 0.000
#> GTGATTCTTAGCGT-1     4 0.000
#> GTGCCACTCAGGAG-1     1 0.000
#> GTGGATTGCACTAG-1     2 0.000
#> GTGGATTGCGGAGA-1     1 0.000
#> GTGGATTGTAACGC-1     1 0.000
#> GTGTACGATCAGTG-1     1 0.000
#> GTGTAGTGGGTACT-1     1 0.000
#> GTGTATCTAGCCTA-1     4 0.000
#> GTGTATCTAGTAGA-1     3 1.000
#> GTGTATCTGTTACG-1     4 0.000
#> GTGTCAGAAGCGTT-1     3 0.000
#> GTTAAAACCGAGAG-1     3 0.000
#> GTTAAATGCTCGAA-1     1 0.000
#> GTTAAATGTCGACA-1     4 0.000
#> GTTAACCTAGCTAC-1     1 0.000
#> GTTAACCTTGCTTT-1     2 0.000
#> GTTAGGTGCACTCC-1     1 0.000
#> GTTAGGTGCCAGTA-1     2 0.000
#> GTTAGGTGCCCAAA-1     2 0.000
#> GTTAGGTGGAACTC-1     4 0.000
#> GTTAGTCTAAGAAC-1     1 0.498
#> GTTATAGAGGACAG-1     1 0.000
#> GTTATGCTTTCATC-1     1 0.000
#> GTTCAACTGGGACA-1     3 0.000
#> GTTCAACTTATGCG-1     1 0.000
#> GTTGACGAGCCCTT-1     3 0.000
#> GTTGACGATATCGG-1     3 0.000
#> GTTGAGTGGTCTTT-1     2 0.000
#> GTTGAGTGTGCTTT-1     1 0.000
#> GTTGATCTGGGACA-1     1 0.000
#> GTTGATCTTTTCAC-1     3 0.000
#> GTTGGATGTTTACC-1     2 0.000
#> GTTGTACTATTCCT-1     2 0.000
#> GTTGTACTTTTGGG-1     1 0.000
#> GTTTAAGACCATGA-1     2 0.000
#> GTTTAAGACTGTCC-1     3 0.000
#> TAAACAACCAACCA-1     1 0.000
#> TAAACAACGAATCC-1     4 0.000
#> TAAAGACTCAGGAG-1     1 0.000
#> TAAATCGATGAGGG-1     1 0.000
#> TAACAATGTGCCCT-1     4 0.000
#> TAACACCTTCGCTC-1     2 0.000
#> TAACACCTTCGTAG-1     2 0.000
#> TAACACCTTGTTTC-1     3 0.000
#> TAACATGACACTAG-1     4 0.502
#> TAACCGGACTTACT-1     1 0.000
#> TAACGTCTCAACCA-1     2 0.000
#> TAACGTCTCATTGG-1     1 0.000
#> TAACTAGAATTTCC-1     1 0.000
#> TAACTAGACTTAGG-1     1 0.000
#> TAACTAGATCTGGA-1     1 0.000
#> TAACTCACGAGGAC-1     2 0.000
#> TAACTCACGTACAC-1     4 0.000
#> TAACTCACGTATCG-1     2 0.000
#> TAACTCACTCTACT-1     3 0.000
#> TAAGAACTGTGTCA-1     2 0.000
#> TAAGAGGACTAAGC-1     4 0.000
#> TAAGAGGACTTGTT-1     3 0.000
#> TAAGATACGGTTCA-1     2 0.000
#> TAAGATTGCGTAGT-1     1 0.000
#> TAAGATTGTTGCTT-1     1 0.000
#> TAAGCGTGAGGTTC-1     2 0.000
#> TAAGCGTGGACAAA-1     2 0.000
#> TAAGCGTGGGAAAT-1     1 0.000
#> TAAGCGTGTGCTCC-1     2 0.000
#> TAAGGCTGCCATGA-1     1 0.000
#> TAAGGCTGCTGCTC-1     1 0.000
#> TAAGGCTGTCTCGC-1     2 0.000
#> TAAGGGCTGCTGTA-1     3 0.000
#> TAAGGGCTTTACTC-1     1 0.000
#> TAAGTAACCGAGAG-1     4 0.000
#> TAAGTAACCTCCAC-1     4 0.000
#> TAAGTAACCTGTAG-1     1 0.000
#> TAAGTAACTTGTCT-1     1 0.000
#> TAATGATGAGCGGA-1     1 0.000
#> TAATGCCTCATGAC-1     1 0.000
#> TAATGCCTCGTCTC-1     3 0.000
#> TAATGTGAAGATGA-1     1 0.000
#> TAATGTGACTGCAA-1     2 0.000
#> TAATGTGATTACTC-1     1 0.000
#> TACAAATGGGTACT-1     1 0.000
#> TACAATGAAAACAG-1     2 0.000
#> TACAATGACTTAGG-1     1 0.000
#> TACAATGATGCTAG-1     1 0.751
#> TACACACTCACACA-1     1 0.000
#> TACACACTCTTACT-1     1 1.000
#> TACATAGAACGCAT-1     1 0.747
#> TACATCACACGGGA-1     1 0.000
#> TACATCACCTGTTT-1     2 0.000
#> TACATCACGCTAAC-1     4 0.000
#> TACATCACTGAACC-1     2 0.000
#> TACCATTGAGGTTC-1     1 0.000
#> TACCATTGCGGGAA-1     2 0.000
#> TACCATTGGGGATG-1     2 0.000
#> TACCATTGTGAGGG-1     2 0.000
#> TACCGGCTGTTGGT-1     1 0.000
#> TACGAGTGATCTCT-1     1 0.000
#> TACGAGTGATGCTG-1     2 0.000
#> TACGAGTGCGGAGA-1     1 0.498
#> TACGAGTGGTTGGT-1     1 0.000
#> TACGATCTAGTGTC-1     1 0.000
#> TACGATCTCACTGA-1     2 0.000
#> TACGATCTTACGAC-1     3 0.502
#> TACGCAGAGAATCC-1     3 1.000
#> TACGCCACATTCCT-1     1 0.000
#> TACGCCACTCCCAC-1     2 0.000
#> TACGCCACTCCGAA-1     4 0.000
#> TACGGAACGCGTTA-1     4 0.000
#> TACGGCCTGGGACA-1     3 0.000
#> TACGTACTACGGAG-1     1 0.000
#> TACGTACTCAGTTG-1     1 0.000
#> TACGTACTCCCGTT-1     4 0.000
#> TACGTTACAGAAGT-1     1 0.000
#> TACGTTACCAAGCT-1     2 0.000
#> TACTAAGAAAGGTA-1     4 0.000
#> TACTAAGAATCACG-1     1 0.000
#> TACTAAGATGATGC-1     2 0.000
#> TACTAAGATTGCGA-1     1 0.000
#> TACTACACGAGAGC-1     1 0.000
#> TACTACACTTACCT-1     4 0.000
#> TACTACTGAACCTG-1     2 0.000
#> TACTACTGATGTCG-1     3 0.000
#> TACTACTGATTCTC-1     1 0.000
#> TACTACTGTATGGC-1     1 0.000
#> TACTCAACGGTCTA-1     2 0.000
#> TACTCAACTGCTAG-1     4 0.000
#> TACTCCCTCAGTTG-1     1 0.000
#> TACTCTGAATCGAC-1     3 0.000
#> TACTCTGACGAGTT-1     1 0.000
#> TACTCTGATTGACG-1     4 0.000
#> TACTGGGATCGATG-1     1 0.000
#> TACTGTTGAAAGCA-1     1 0.000
#> TACTGTTGAGGCGA-1     3 0.000
#> TACTGTTGCTGAAC-1     4 0.249
#> TACTTGACTCCTCG-1     3 1.000
#> TACTTGACTGGTGT-1     4 0.000
#> TACTTTCTTTTGGG-1     1 0.000
#> TAGAAACTAATCGC-1     1 0.000
#> TAGAAACTGCTTCC-1     2 0.000
#> TAGAAACTGGGATG-1     3 0.000
#> TAGAATTGCGACAT-1     1 0.000
#> TAGAATTGTATCGG-1     1 0.000
#> TAGACGTGCTTGAG-1     1 0.000
#> TAGACGTGTCGCTC-1     1 0.000
#> TAGAGCACCTTACT-1     4 0.000
#> TAGATTGACTTGTT-1     4 0.000
#> TAGATTGAGGCATT-1     1 1.000
#> TAGCATCTCAGCTA-1     3 0.000
#> TAGCATCTCCCTCA-1     1 0.000
#> TAGCATCTGCTGTA-1     2 0.000
#> TAGCATCTGGGACA-1     1 0.000
#> TAGCATCTTGTCGA-1     1 0.000
#> TAGCCCACAAAAGC-1     1 0.000
#> TAGCCCACAGCCAT-1     3 0.249
#> TAGCCCACAGCTAC-1     3 0.000
#> TAGCCCACCCACAA-1     1 0.000
#> TAGCCCTGCGGAGA-1     1 0.000
#> TAGCCGCTTACGAC-1     1 0.000
#> TAGCCGCTTACTTC-1     3 0.000
#> TAGCCGCTTTCCAT-1     2 0.000
#> TAGCTACTGAATAG-1     4 0.000
#> TAGCTACTGTAGCT-1     1 0.000
#> TAGCTACTTTTGCT-1     1 0.000
#> TAGGACTGTGCTGA-1     1 0.502
#> TAGGAGCTAAGGCG-1     4 0.000
#> TAGGAGCTGAGGGT-1     1 0.000
#> TAGGAGCTTGCATG-1     4 0.000
#> TAGGCAACCGTCTC-1     4 0.000
#> TAGGCATGCTCTCG-1     3 0.502
#> TAGGCATGGCGAGA-1     3 0.253
#> TAGGCTGATGCCTC-1     2 0.000
#> TAGGGACTGAACTC-1     3 0.000
#> TAGGTCGACACTGA-1     1 0.000
#> TAGGTCGAGGATCT-1     4 0.000
#> TAGGTGACACACTG-1     1 0.000
#> TAGGTGACACGTTG-1     4 0.000
#> TAGGTGTGTTCTGT-1     3 0.751
#> TAGGTTCTGAAGGC-1     1 0.000
#> TAGGTTCTTCTTAC-1     2 0.000
#> TAGGTTCTTGCTGA-1     2 0.000
#> TAGTAAACCTCGCT-1     1 0.000
#> TAGTAAACGTCACA-1     1 0.000
#> TAGTAATGAGATCC-1     1 0.000
#> TAGTACCTAAGAAC-1     2 0.000
#> TAGTATGATCTTAC-1     4 0.000
#> TAGTATGATTCTCA-1     1 0.000
#> TAGTCTTGGCTGTA-1     1 0.000
#> TAGTCTTGGGACTT-1     1 0.249
#> TAGTCTTGTGGAAA-1     3 0.000
#> TAGTGGTGAAGTGA-1     3 0.000
#> TAGTTAGAACCACA-1     3 0.000
#> TAGTTAGATGAACC-1     1 0.000
#> TATAAGACAACAGA-1     1 1.000
#> TATAAGACAGCTCA-1     2 0.000
#> TATAAGTGACACCA-1     2 0.000
#> TATAAGTGTATCGG-1     2 0.000
#> TATAAGTGTGGTGT-1     2 0.000
#> TATACAGAACCCTC-1     1 1.000
#> TATACAGAAGAACA-1     1 0.000
#> TATACAGATCCAGA-1     1 0.000
#> TATACCACCTGATG-1     4 0.000
#> TATACGCTACCAAC-1     1 0.000
#> TATAGATGGACGGA-1     1 0.000
#> TATAGATGTTCCGC-1     2 0.000
#> TATCCAACCAGCTA-1     2 0.000
#> TATCCAACTCTCTA-1     3 1.000
#> TATCGACTACTAGC-1     1 1.000
#> TATCGACTCGATAC-1     2 0.000
#> TATCGTACAGATGA-1     1 0.751
#> TATCGTACATTCCT-1     2 0.000
#> TATCTCGAGAGATA-1     1 0.000
#> TATCTGACAGGTTC-1     3 0.000
#> TATCTGACTGTTTC-1     1 0.000
#> TATCTTCTAAACAG-1     1 0.000
#> TATGAATGGAGGAC-1     3 0.000
#> TATGAATGTTTGCT-1     2 0.000
#> TATGCGGATAACCG-1     1 1.000
#> TATGGGTGCATCAG-1     3 0.000
#> TATGGGTGCTAGCA-1     4 0.000
#> TATGGTCTCTACCC-1     1 0.000
#> TATGTCACGGAACG-1     4 0.000
#> TATGTCACTAACCG-1     2 0.000
#> TATGTCACTTCTCA-1     4 0.000
#> TATGTGCTCCGATA-1     2 0.000
#> TATGTGCTGGATTC-1     1 0.000
#> TATTGCTGAAGAAC-1     2 0.000
#> TATTGCTGCCGTTC-1     4 0.000
#> TATTGCTGTCTGGA-1     1 0.000
#> TATTGCTGTGCACA-1     1 0.747
#> TATTTCCTATTGGC-1     2 0.000
#> TATTTCCTGGAGGT-1     3 0.000
#> TATTTCCTGGTGTT-1     1 0.000
#> TCAACACTGTTTGG-1     3 0.000
#> TCAAGGACAGCGTT-1     1 0.000
#> TCAAGGACATTCTC-1     3 0.000
#> TCAAGGACGGTGTT-1     2 0.000
#> TCAATCACACTCTT-1     3 0.000
#> TCAATCACAGTCGT-1     2 0.000
#> TCACAACTATGTGC-1     1 0.000
#> TCACAACTTTGCTT-1     2 0.000
#> TCACATACACTTTC-1     1 0.000
#> TCACATACAGGGTG-1     1 0.000
#> TCACCCGAGACGGA-1     2 0.000
#> TCACCGTGCTCGCT-1     2 0.000
#> TCACCTCTACGACT-1     3 1.000
#> TCACCTCTTCCAAG-1     2 0.000
#> TCACGAGAGGAGGT-1     4 0.000
#> TCACTATGGGGCAA-1     3 0.502
#> TCACTATGGTTGTG-1     4 0.253
#> TCAGACGACGCTAA-1     1 0.000
#> TCAGACGACGTTAG-1     3 0.000
#> TCAGAGACTCCAGA-1     1 0.000
#> TCAGCAGACTCCAC-1     1 0.000
#> TCAGCGCTCTAGTG-1     1 1.000
#> TCAGCGCTGGATCT-1     4 0.000
#> TCAGCGCTGGTATC-1     1 0.498
#> TCAGGATGAAGTAG-1     1 0.000
#> TCAGGATGCCTTTA-1     2 0.000
#> TCAGTGGAAGATCC-1     3 0.000
#> TCAGTTACCTACGA-1     2 0.000
#> TCAGTTACTAGAAG-1     1 0.000
#> TCATCAACCCGATA-1     1 0.000
#> TCATCAACTGTTCT-1     2 0.000
#> TCATCATGCAGTTG-1     1 0.000
#> TCATCCCTTACTGG-1     1 0.000
#> TCATTCGATACAGC-1     2 0.000
#> TCCACGTGGAAACA-1     1 0.000
#> TCCACTCTACACTG-1     1 0.000
#> TCCACTCTGAGCTT-1     2 0.000
#> TCCACTCTTACTTC-1     4 0.000
#> TCCATAACAAAGTG-1     1 0.000
#> TCCATAACCGTAGT-1     4 0.000
#> TCCATAACGATGAA-1     1 0.000
#> TCCATAACTACGCA-1     1 0.000
#> TCCATCCTCCCTAC-1     3 0.000
#> TCCCACGATCATTC-1     1 0.000
#> TCCCATCTCAAAGA-1     2 0.000
#> TCCCGAACACAGTC-1     3 0.000
#> TCCCGAACTTCGCC-1     2 0.000
#> TCCCGATGAGATCC-1     1 0.000
#> TCCCGATGCCTGAA-1     2 0.000
#> TCCCTACTCAACTG-1     4 0.000
#> TCCGAAGACAATCG-1     2 0.000
#> TCCGAAGACGTTAG-1     1 0.000
#> TCCGGACTGAGGTG-1     1 0.000
#> TCCGGACTGTACGT-1     1 1.000
#> TCCTAAACATCGAC-1     1 0.000
#> TCCTAAACCGAGAG-1     1 0.000
#> TCCTAAACCGCATA-1     3 0.000
#> TCCTAATGGTTTGG-1     3 0.000
#> TCCTACCTGTCGTA-1     1 0.000
#> TCCTATGAAAAGCA-1     3 0.000
#> TCGAATCTCTGGTA-1     3 0.502
#> TCGACCTGCCGATA-1     2 0.000
#> TCGACGCTTCTATC-1     2 0.000
#> TCGACGCTTTGACG-1     1 0.000
#> TCGAGAACGACAGG-1     1 0.000
#> TCGAGAACGTTAGC-1     3 1.000
#> TCGAGCCTATCAGC-1     4 0.000
#> TCGAGCCTGCGAGA-1     1 0.000
#> TCGAGCCTTGTGAC-1     1 0.000
#> TCGATACTATTCCT-1     1 0.249
#> TCGATACTTGCACA-1     1 0.000
#> TCGATTTGATGCCA-1     2 0.000
#> TCGATTTGCACTCC-1     1 0.000
#> TCGATTTGCAGCTA-1     3 0.000
#> TCGATTTGCCTACC-1     2 0.000
#> TCGATTTGTCGTGA-1     4 0.000
#> TCGCAGCTAGATCC-1     1 0.000
#> TCGCCATGAGACTC-1     1 0.000
#> TCGCCATGTGGTCA-1     4 0.000
#> TCGGACCTAACAGA-1     1 0.000
#> TCGGACCTATAAGG-1     4 0.000
#> TCGGACCTGTACAC-1     1 0.000
#> TCGGTAGAGTAGGG-1     1 0.000
#> TCGGTAGATCCCAC-1     4 0.000
#> TCGTAGGATCGACA-1     1 0.000
#> TCGTTATGGACAAA-1     1 0.000
#> TCTAACACCAGTTG-1     3 0.000
#> TCTAACACGAGCAG-1     2 0.000
#> TCTAACTGAACCAC-1     1 0.000
#> TCTAAGCTAATGCC-1     1 0.000
#> TCTAAGCTTAGTCG-1     3 0.000
#> TCTAAGCTTCTAGG-1     2 0.000
#> TCTAAGCTTGTTCT-1     2 0.000
#> TCTAAGCTTTCGCC-1     4 0.000
#> TCTACAACGACTAC-1     2 0.000
#> TCTAGACTTAGAAG-1     2 0.000
#> TCTAGTTGCACCAA-1     2 0.000
#> TCTATGTGAAGAGT-1     2 0.000
#> TCTATGTGAGTCTG-1     1 1.000
#> TCTCAAACCTAAGC-1     4 0.000
#> TCTCTAGAATTTCC-1     1 0.000
#> TCTGATACACGTGT-1     1 0.000
#> TCTGATACTCGCCT-1     1 0.000
#> TCTTACGAACCTGA-1     2 0.000
#> TCTTCAGAGCTACA-1     2 0.000
#> TCTTGATGCGGAGA-1     1 1.000
#> TGAAATTGGTGAGG-1     2 0.000
#> TGAACCGAAAACGA-1     1 0.000
#> TGAACCGACTACTT-1     2 0.000
#> TGAACCGATTCGGA-1     2 0.000
#> TGAAGCACTCACGA-1     1 0.000
#> TGAAGCTGAACGAA-1     1 0.000
#> TGAAGCTGCATGGT-1     4 0.000
#> TGAAGCTGCGTAAC-1     1 0.000
#> TGAATAACCACTTT-1     1 0.000
#> TGAATAACTCCCAC-1     3 0.000
#> TGACACGACCTTAT-1     4 0.000
#> TGACCAGACAACCA-1     1 0.000
#> TGACCAGAGGATTC-1     1 0.000
#> TGACCGCTAAAAGC-1     1 0.000
#> TGACCGCTCTGCAA-1     1 0.000
#> TGACGATGCAAAGA-1     2 0.000
#> TGACGCCTGTACCA-1     1 0.751
#> TGACGCCTTTACTC-1     3 1.000
#> TGACTGGAAGAGAT-1     2 0.000
#> TGACTGGACCGTAA-1     1 0.000
#> TGACTGGACGCAAT-1     1 0.000
#> TGACTGGAGGACAG-1     4 0.000
#> TGACTGGATTCTCA-1     1 0.000
#> TGACTTACACACCA-1     1 0.000
#> TGACTTACAGTCTG-1     2 0.000
#> TGACTTTGCGCATA-1     1 0.000
#> TGACTTTGTTTGTC-1     1 0.000
#> TGAGACACAAGGTA-1     1 0.000
#> TGAGACACTCAAGC-1     1 0.498
#> TGAGCTGAATGCTG-1     2 0.000
#> TGAGCTGACTGGAT-1     2 0.000
#> TGAGCTGATGCTAG-1     2 0.000
#> TGAGGACTCTCATT-1     2 0.000
#> TGAGGACTTCATTC-1     1 0.000
#> TGAGGTACGAACCT-1     2 0.000
#> TGAGTCGAGTTACG-1     4 0.000
#> TGAGTGACTGAGCT-1     1 0.000
#> TGATAAACGAATCC-1     1 0.000
#> TGATAAACTCCGTC-1     3 0.000
#> TGATAAACTTTCAC-1     1 0.000
#> TGATACCTCACTAG-1     2 0.000
#> TGATACCTGTTGGT-1     1 0.000
#> TGATACCTTATGCG-1     1 0.000
#> TGATACCTTGAAGA-1     1 0.000
#> TGATATGAACCTTT-1     1 0.000
#> TGATCACTAGCATC-1     3 0.249
#> TGATCACTCTCGCT-1     1 0.000
#> TGATCACTTCTACT-1     4 0.000
#> TGATCGGACTGACA-1     2 0.000
#> TGATCGGAGGAGCA-1     4 0.000
#> TGATCGGATATGCG-1     2 0.000
#> TGATTAGACATTGG-1     1 0.000
#> TGATTAGATGACTG-1     4 0.000
#> TGATTAGATGCTAG-1     1 0.000
#> TGATTCACTATGCG-1     1 0.000
#> TGATTCACTGTCAG-1     4 0.000
#> TGATTCTGCCGAAT-1     1 0.000
#> TGATTCTGCTCTTA-1     1 0.000
#> TGCAAGTGAGAACA-1     1 0.000
#> TGCAAGTGGGTAGG-1     2 0.000
#> TGCAATCTTCAGGT-1     2 0.000
#> TGCACAGACGACAT-1     3 0.000
#> TGCCAAGAGCAGTT-1     2 0.000
#> TGCCAAGATCTCTA-1     1 0.000
#> TGCCACTGAACGTC-1     1 0.000
#> TGCCACTGCGATAC-1     3 0.000
#> TGCCAGCTTGGCAT-1     1 0.000
#> TGCCCAACAGCAAA-1     1 0.000
#> TGCCCAACCGCATA-1     2 0.000
#> TGCCGACTCTCCCA-1     4 0.000
#> TGCGAAACAGTCAC-1     4 0.000
#> TGCGAAACGTTGCA-1     4 0.000
#> TGCGATGAACGGTT-1     1 0.000
#> TGCGATGACCTCGT-1     1 0.000
#> TGCGATGACTAGTG-1     4 0.000
#> TGCGATGACTGCTC-1     4 0.000
#> TGCGATGACTTGCC-1     4 0.000
#> TGCGATGAGTGCTA-1     2 0.000
#> TGCGCACTCTTGAG-1     2 0.000
#> TGCGTAGAATAAGG-1     2 0.000
#> TGCGTAGACGGGAA-1     4 0.000
#> TGCGTAGATGGTCA-1     2 0.000
#> TGCTAGGAAACCGT-1     3 1.000
#> TGCTAGGATAGTCG-1     1 0.000
#> TGCTATACGGTTCA-1     2 0.000
#> TGCTATACTGCTGA-1     3 0.747
#> TGCTGAGAGAGCAG-1     3 0.000
#> TGCTGAGATTATCC-1     1 0.000
#> TGGAAAGACTCTCG-1     4 0.000
#> TGGAAAGAGCGATT-1     1 0.000
#> TGGAAAGAGGTCAT-1     2 0.000
#> TGGAAAGATATGGC-1     1 0.000
#> TGGAACACAAACAG-1     3 0.000
#> TGGAACACGCTAAC-1     1 1.000
#> TGGAAGCTCAGATC-1     1 0.000
#> TGGACCCTACACTG-1     2 0.000
#> TGGACCCTCATGGT-1     1 0.249
#> TGGACCCTGGTACT-1     2 0.000
#> TGGACTGAGTATGC-1     1 0.000
#> TGGAGACTATCAGC-1     2 0.000
#> TGGAGACTTCAAGC-1     1 0.000
#> TGGAGACTTGACCA-1     3 0.000
#> TGGAGGGACGGAGA-1     2 0.000
#> TGGAGGGAGCTATG-1     1 0.000
#> TGGATCGATAAAGG-1     1 0.000
#> TGGATGTGACCTAG-1     4 0.000
#> TGGATGTGTGAAGA-1     4 0.000
#> TGGATTCTCATACG-1     1 0.751
#> TGGCAATGCTTGTT-1     4 0.000
#> TGGCACCTTCACGA-1     1 0.498
#> TGGCACCTTCAGTG-1     2 0.000
#> TGGGTATGAAGAGT-1     1 0.000
#> TGGGTATGCACAAC-1     1 0.000
#> TGGGTATGGTACGT-1     4 0.000
#> TGGGTATGTTTGGG-1     2 0.000
#> TGGTAGACATGCCA-1     1 0.000
#> TGGTAGACCCTCAC-1     3 0.000
#> TGGTAGACCTGATG-1     1 0.249
#> TGGTAGTGCACTGA-1     2 0.000
#> TGGTATCTAAACAG-1     1 0.000
#> TGGTATCTCTTCCG-1     1 0.000
#> TGGTCAGACCCAAA-1     1 0.502
#> TGGTTACTGACGTT-1     2 0.000
#> TGGTTACTGTTCTT-1     1 0.000
#> TGTAACCTAGAGGC-1     1 0.000
#> TGTAACCTTGCCTC-1     2 0.000
#> TGTAATGACACAAC-1     3 0.000
#> TGTAATGAGGTAAA-1     3 0.000
#> TGTACTTGCTCTAT-1     2 0.000
#> TGTAGGTGCGAGAG-1     4 0.000
#> TGTAGGTGCTATGG-1     1 0.000
#> TGTAGGTGCTCTAT-1     2 0.000
#> TGTAGGTGTGCTGA-1     1 0.000
#> TGTAGTCTTCCAGA-1     1 0.253
#> TGTAGTCTTGCACA-1     3 1.000
#> TGTATCTGTTAGGC-1     1 0.000
#> TGTATGCTCATGGT-1     4 0.000
#> TGTATGCTGTAGGG-1     1 0.000
#> TGTATGCTTTCATC-1     1 0.000
#> TGTCAGGAATACCG-1     1 0.000
#> TGTCAGGAGATGAA-1     2 0.000
#> TGTCTAACCCCTTG-1     1 0.000
#> TGTGACGATTCTCA-1     3 0.000
#> TGTGAGACTGTCAG-1     2 0.000
#> TGTGAGACTTGAGC-1     1 0.000
#> TGTGAGTGACCACA-1     1 0.000
#> TGTGAGTGAGTGCT-1     2 0.000
#> TGTGAGTGGAGATA-1     3 0.000
#> TGTGATCTCTCTAT-1     4 0.000
#> TGTGATCTGACACT-1     1 0.000
#> TGTGGATGGCCAAT-1     4 0.000
#> TGTTAAGACAAAGA-1     2 0.000
#> TGTTAAGATAAGGA-1     2 0.000
#> TGTTACACCGCATA-1     2 0.000
#> TGTTACACGACTAC-1     2 0.000
#> TGTTACTGGCTACA-1     3 0.249
#> TGTTACTGTAGTCG-1     3 0.000
#> TTAACCACCGTAAC-1     1 0.000
#> TTAACCACTAAGGA-1     3 0.000
#> TTAACCACTCAGAC-1     1 1.000
#> TTACACACGTGTTG-1     1 0.000
#> TTACACACTCCTAT-1     1 0.000
#> TTACCATGAATCGC-1     2 0.000
#> TTACCATGGTTGAC-1     1 0.000
#> TTACCATGTGTCTT-1     3 0.000
#> TTACCATGTTGTGG-1     4 0.000
#> TTACGACTGAGAGC-1     1 0.000
#> TTACGACTTGACAC-1     2 0.000
#> TTACGTACGTTCAG-1     3 0.000
#> TTACTCGAAGAATG-1     2 0.000
#> TTACTCGACGCAAT-1     2 0.000
#> TTACTCGAGGGTGA-1     1 0.000
#> TTACTCGATCTACT-1     3 0.000
#> TTAGAATGTGGTGT-1     1 0.000
#> TTAGAATGTGTAGC-1     1 0.751
#> TTAGACCTCCTACC-1     1 0.000
#> TTAGACCTCCTTTA-1     2 0.000
#> TTAGCTACAACCGT-1     1 0.000
#> TTAGCTACTGTCCC-1     2 0.000
#> TTAGCTACTTTCGT-1     1 0.000
#> TTAGGGACGCGAAG-1     1 1.000
#> TTAGGGTGCTGGAT-1     4 0.000
#> TTAGGGTGTCCTGC-1     2 0.000
#> TTAGGTCTACTTTC-1     2 0.000
#> TTAGTCACCAGTTG-1     1 0.000
#> TTAGTCTGAAAGCA-1     4 0.000
#> TTAGTCTGCCAACA-1     3 0.000
#> TTAGTCTGTGCACA-1     1 0.000
#> TTATCCGACTAGTG-1     4 0.000
#> TTATCCGAGAAAGT-1     2 0.000
#> TTATGAGAGATAAG-1     1 0.000
#> TTATGCACGTCACA-1     4 0.000
#> TTATGGCTTATGGC-1     2 0.000
#> TTATTCCTATGCTG-1     2 0.000
#> TTATTCCTGGACAG-1     4 0.000
#> TTATTCCTGGTACT-1     4 0.000
#> TTATTCCTTCGTGA-1     1 0.000
#> TTCAAAGATAAAGG-1     1 0.498
#> TTCAACACAACAGA-1     1 0.000
#> TTCAACACCCCAAA-1     2 0.000
#> TTCAACACGGACGA-1     2 0.000
#> TTCAAGCTAAGAAC-1     2 0.000
#> TTCAAGCTAGATGA-1     1 0.000
#> TTCAAGCTGTTGAC-1     1 0.000
#> TTCAAGCTTGATGC-1     1 0.000
#> TTCAAGCTTTCGCC-1     1 0.000
#> TTCACAACCCGTTC-1     2 0.000
#> TTCACAACGTCTGA-1     2 0.000
#> TTCAGACTACCCAA-1     1 0.498
#> TTCAGACTCTCGAA-1     1 0.000
#> TTCAGTACCGACTA-1     1 0.000
#> TTCAGTACTCAAGC-1     1 0.000
#> TTCAGTACTCCTAT-1     2 0.000
#> TTCAGTTGCCAAGT-1     1 0.000
#> TTCAGTTGTCCTTA-1     2 0.000
#> TTCAGTTGTCTAGG-1     1 0.000
#> TTCAGTTGTCTCGC-1     4 0.253
#> TTCATCGAGGTGGA-1     2 0.000
#> TTCATGTGTGGTGT-1     1 0.000
#> TTCATTCTATGTCG-1     2 0.000
#> TTCATTCTTCTCTA-1     1 0.000
#> TTCCAAACCTATGG-1     2 0.000
#> TTCCAAACCTCCCA-1     4 0.000
#> TTCCAAACTCCCAC-1     3 0.000
#> TTCCAAACTTGACG-1     3 0.000
#> TTCCATGACGAGAG-1     2 0.000
#> TTCCATGACTGTCC-1     1 0.000
#> TTCCCACTTGAGGG-1     3 0.000
#> TTCCCACTTGTCTT-1     2 0.000
#> TTCCTAGAAAGTGA-1     1 0.000
#> TTCCTAGACTAGTG-1     2 0.000
#> TTCGAGGACTCTAT-1     1 0.000
#> TTCGAGGAGGGCAA-1     1 0.751
#> TTCGAGGATAGAAG-1     2 0.000
#> TTCGATTGAGCATC-1     1 0.000
#> TTCGGAGAATGCCA-1     2 0.000
#> TTCGGAGATGTGCA-1     1 0.000
#> TTCGTATGAAAAGC-1     3 0.000
#> TTCGTATGGATAGA-1     3 0.000
#> TTCGTATGGTCTGA-1     1 0.000
#> TTCGTATGTCCTTA-1     2 0.000
#> TTCTACGAACGTAC-1     1 0.000
#> TTCTACGAGTTGGT-1     1 0.000
#> TTCTAGTGACACGT-1     1 0.000
#> TTCTAGTGCATGAC-1     2 0.000
#> TTCTAGTGGAGAGC-1     3 0.000
#> TTCTAGTGGTCACA-1     2 0.000
#> TTCTCAGAAGAGAT-1     1 0.000
#> TTCTCAGAAGCATC-1     4 0.000
#> TTCTCAGATGGAGG-1     1 0.000
#> TTCTGATGGAGACG-1     3 0.000
#> TTCTTACTCTGGAT-1     2 0.000
#> TTGAACCTCCTTGC-1     4 0.000
#> TTGAATGAACTACG-1     2 0.000
#> TTGAATGACTTACT-1     1 0.000
#> TTGAATGATCTCAT-1     4 0.000
#> TTGACACTCTGTAG-1     1 0.000
#> TTGACACTGATAAG-1     4 0.000
#> TTGAGGACAGAACA-1     2 0.000
#> TTGAGGACTACGCA-1     2 0.000
#> TTGAGGTGGACGGA-1     1 0.000
#> TTGCATTGAGCTAC-1     1 0.000
#> TTGCATTGCTAAGC-1     2 0.000
#> TTGCATTGTGACTG-1     1 0.000
#> TTGCTAACACCAAC-1     1 0.751
#> TTGCTAACACGCTA-1     2 0.000
#> TTGCTAACCACTCC-1     1 0.000
#> TTGCTATGGTACGT-1     2 0.000
#> TTGCTATGGTAGGG-1     2 0.000
#> TTGGAGACCAATCG-1     1 0.000
#> TTGGAGACGCTATG-1     2 0.000
#> TTGGAGACTATGGC-1     4 0.000
#> TTGGGAACTGAACC-1     1 0.000
#> TTGGTACTACTGGT-1     2 0.000
#> TTGGTACTCTTAGG-1     1 0.000
#> TTGGTACTGAATCC-1     4 0.000
#> TTGGTACTGGATTC-1     4 0.000
#> TTGTACACGTTGTG-1     4 0.000
#> TTGTACACTTGCAG-1     1 0.000
#> TTGTAGCTAGCTCA-1     1 0.000
#> TTGTAGCTCTCTTA-1     4 0.000
#> TTGTCATGGACGGA-1     3 0.000
#> TTTAGAGATCCTCG-1     4 0.000
#> TTTAGCTGATACCG-1     1 0.000
#> TTTAGCTGGATACC-1     2 0.000
#> TTTAGCTGTACTCT-1     2 0.000
#> TTTAGGCTCCTTTA-1     2 0.000
#> TTTATCCTGTTGTG-1     2 0.000
#> TTTCACGAGGTTCA-1     1 0.000
#> TTTCAGTGGAAGGC-1     1 0.000
#> TTTCAGTGTCACGA-1     4 0.000
#> TTTCAGTGTCTATC-1     2 0.000
#> TTTCAGTGTGCAGT-1     4 0.000
#> TTTCCAGAGGTGAG-1     1 0.000
#> TTTCGAACACCTGA-1     4 0.249
#> TTTCGAACTCTCAT-1     2 0.000
#> TTTCTACTGAGGCA-1     4 0.249
#> TTTCTACTTCCTCG-1     4 0.000
#> TTTGCATGAGAGGC-1     4 0.000
#> TTTGCATGCCTCAC-1     1 0.000

Heatmaps for the consensus matrix. It visualizes the probability of two samples to be in a same group.

consensus_heatmap(res, k = 2)

plot of chunk tab-node-0-consensus-heatmap-1

consensus_heatmap(res, k = 3)

plot of chunk tab-node-0-consensus-heatmap-2

consensus_heatmap(res, k = 4)

plot of chunk tab-node-0-consensus-heatmap-3

Heatmaps for the membership of samples in all partitions to see how consistent they are:

membership_heatmap(res, k = 2)

plot of chunk tab-node-0-membership-heatmap-1

membership_heatmap(res, k = 3)

plot of chunk tab-node-0-membership-heatmap-2

membership_heatmap(res, k = 4)

plot of chunk tab-node-0-membership-heatmap-3

As soon as the classes for columns are determined, the signatures that are significantly different between subgroups can be looked for. Following are the heatmaps for signatures.

Signature heatmaps where rows are scaled:

get_signatures(res, k = 2)

plot of chunk tab-node-0-get-signatures-1

get_signatures(res, k = 3)

plot of chunk tab-node-0-get-signatures-2

get_signatures(res, k = 4)

plot of chunk tab-node-0-get-signatures-3

Signature heatmaps where rows are not scaled:

get_signatures(res, k = 2, scale_rows = FALSE)

plot of chunk tab-node-0-get-signatures-no-scale-1

get_signatures(res, k = 3, scale_rows = FALSE)

plot of chunk tab-node-0-get-signatures-no-scale-2

get_signatures(res, k = 4, scale_rows = FALSE)

plot of chunk tab-node-0-get-signatures-no-scale-3

Compare the overlap of signatures from different k:

compare_signatures(res)

plot of chunk node-0-signature_compare

get_signature() returns a data frame invisibly. To get the list of signatures, the function call should be assigned to a variable explicitly. In following code, if plot argument is set to FALSE, no heatmap is plotted while only the differential analysis is performed.

# code only for demonstration
tb = get_signature(res, k = ..., plot = FALSE)

An example of the output of tb is:

#>   which_row         fdr    mean_1    mean_2 scaled_mean_1 scaled_mean_2 km
#> 1        38 0.042760348  8.373488  9.131774    -0.5533452     0.5164555  1
#> 2        40 0.018707592  7.106213  8.469186    -0.6173731     0.5762149  1
#> 3        55 0.019134737 10.221463 11.207825    -0.6159697     0.5749050  1
#> 4        59 0.006059896  5.921854  7.869574    -0.6899429     0.6439467  1
#> 5        60 0.018055526  8.928898 10.211722    -0.6204761     0.5791110  1
#> 6        98 0.009384629 15.714769 14.887706     0.6635654    -0.6193277  2
...

The columns in tb are:

  1. which_row: row indices corresponding to the input matrix.
  2. fdr: FDR for the differential test.
  3. mean_x: The mean value in group x.
  4. scaled_mean_x: The mean value in group x after rows are scaled.
  5. km: Row groups if k-means clustering is applied to rows (which is done by automatically selecting number of clusters).

If there are too many signatures, top_signatures = ... can be set to only show the signatures with the highest FDRs:

# code only for demonstration
# e.g. to show the top 500 most significant rows
tb = get_signature(res, k = ..., top_signatures = 500)

If the signatures are defined as these which are uniquely high in current group, diff_method argument can be set to "uniquely_high_in_one_group":

# code only for demonstration
tb = get_signature(res, k = ..., diff_method = "uniquely_high_in_one_group")

UMAP plot which shows how samples are separated.

dimension_reduction(res, k = 2, method = "UMAP")

plot of chunk tab-node-0-dimension-reduction-1

dimension_reduction(res, k = 3, method = "UMAP")

plot of chunk tab-node-0-dimension-reduction-2

dimension_reduction(res, k = 4, method = "UMAP")

plot of chunk tab-node-0-dimension-reduction-3

Following heatmap shows how subgroups are split when increasing k:

collect_classes(res)

plot of chunk node-0-collect-classes

Test correlation between subgroups and known annotations. If the known annotation is numeric, one-way ANOVA test is applied, and if the known annotation is discrete, chi-squared contingency table test is applied.

test_to_known_factors(res)
#>             n_sample Seurat_class(p-value) k
#> ATC:skmeans     2329                     0 2
#> ATC:skmeans     2337                     0 3
#> ATC:skmeans     2424                     0 4

If matrix rows can be associated to genes, consider to use functional_enrichment(res, ...) to perform function enrichment for the signature genes. See this vignette for more detailed explanations.


Node02

Parent node: Node0. Child nodes: Node021 , Node022 , Node031-leaf , Node032-leaf , Node041-leaf , Node042-leaf .

The object with results only for a single top-value method and a single partitioning method can be extracted as:

res = res_rh["02"]

A summary of res and all the functions that can be applied to it:

res
#> A 'DownSamplingConsensusPartition' object with k = 2, 3, 4.
#>   On a matrix with 3664 rows and 500 columns, randomly sampled from 672 columns.
#>   Top rows (348) are extracted by 'ATC' method.
#>   Subgroups are detected by 'skmeans' method.
#>   Performed in total 150 partitions by row resampling.
#>   Best k for subgroups seems to be 3.
#> 
#> Following methods can be applied to this 'DownSamplingConsensusPartition' object:
#>  [1] "cola_report"             "collect_classes"         "collect_plots"          
#>  [4] "collect_stats"           "colnames"                "compare_partitions"     
#>  [7] "compare_signatures"      "consensus_heatmap"       "dimension_reduction"    
#> [10] "functional_enrichment"   "get_anno_col"            "get_anno"               
#> [13] "get_classes"             "get_consensus"           "get_matrix"             
#> [16] "get_membership"          "get_param"               "get_signatures"         
#> [19] "get_stats"               "is_best_k"               "is_stable_k"            
#> [22] "membership_heatmap"      "ncol"                    "nrow"                   
#> [25] "plot_ecdf"               "predict_classes"         "rownames"               
#> [28] "select_partition_number" "show"                    "suggest_best_k"         
#> [31] "test_to_known_factors"   "top_rows_heatmap"

collect_plots() function collects all the plots made from res for all k (number of subgroups) into one single page to provide an easy and fast comparison between different k.

collect_plots(res)

plot of chunk node-02-collect-plots

The plots are:

All the plots in panels can be made by individual functions and they are plotted later in this section.

select_partition_number() produces several plots showing different statistics for choosing “optimized” k. There are following statistics:

The detailed explanations of these statistics can be found in the cola vignette.

Generally speaking, higher 1-PAC score, higher mean silhouette score or higher concordance corresponds to better partition. Rand index and Jaccard index measure how similar the current partition is compared to partition with k-1. If they are too similar, we won't accept k is better than k-1.

select_partition_number(res)

plot of chunk node-02-select-partition-number

The numeric values for all these statistics can be obtained by get_stats().

get_stats(res)
#>   k 1-PAC mean_silhouette concordance area_increased  Rand Jaccard
#> 2 2 0.962           0.956       0.982          0.500 0.501   0.501
#> 3 3 0.937           0.930       0.971          0.292 0.801   0.623
#> 4 4 0.810           0.842       0.921          0.154 0.859   0.623

suggest_best_k() suggests the best \(k\) based on these statistics. The rules are as follows:

suggest_best_k(res)
#> [1] 3
#> attr(,"optional")
#> [1] 2

There is also optional best \(k\) = 2 that is worth to check.

Following is the table of the partitions (You need to click the show/hide code output link to see it). The membership matrix (columns with name p*) is inferred by clue::cl_consensus() function with the SE method. Basically the value in the membership matrix represents the probability to belong to a certain group. The finall subgroup label for an item is determined with the group with highest probability it belongs to.

In get_classes() function, the entropy is calculated from the membership matrix and the silhouette score is calculated from the consensus matrix.

show/hide code output

get_classes(res, k = 2)
#>                  class     p
#> AAACCGTGCTTCCG-1     2 0.000
#> AAACGCTGTTTCTG-1     1 1.000
#> AAAGAGACGCGAGA-1     1 0.000
#> AAAGCAGATATCGG-1     2 0.502
#> AAAGTTTGTAGCGT-1     1 0.000
#> AAATCAACCCTATT-1     2 0.000
#> AAATCATGACCACA-1     2 0.000
#> AAATGTTGAACGAA-1     1 0.000
#> AAATGTTGTGGCAT-1     2 0.249
#> AAATTCGAATCACG-1     1 0.000
#> AAATTCGAGCTGAT-1     2 0.000
#> AACACGTGGAACCT-1     1 0.249
#> AACACGTGTACGAC-1     2 0.000
#> AACAGCACAAGAGT-1     1 0.000
#> AACATTGATGGGAG-1     2 0.000
#> AACCAGTGATACCG-1     2 0.000
#> AACCGATGTTCTAC-1     1 0.000
#> AACCGCCTCTACGA-1     2 0.747
#> AACCTACTGTGAGG-1     2 0.000
#> AACCTTACTAACGC-1     2 0.000
#> AACCTTTGTACGCA-1     2 0.000
#> AACTCACTCAAGCT-1     1 0.000
#> AACTCACTTGGAGG-1     1 0.000
#> AACTCGGAAGGTCT-1     1 0.249
#> AACTGTCTCCCTTG-1     1 0.000
#> AAGACAGATTACCT-1     1 0.000
#> AAGATGGAGAACTC-1     2 0.498
#> AAGATGGAGATAAG-1     2 0.751
#> AAGATTACAGATCC-1     2 1.000
#> AAGATTACCCGTTC-1     1 0.747
#> AAGATTACCGCCTT-1     1 0.000
#> AAGATTACTCCTCG-1     1 0.249
#> AAGCCATGAACTGC-1     2 0.000
#> AAGCCATGACACGT-1     1 0.498
#> AAGCCTGACCGAAT-1     1 0.000
#> AAGCGACTCCTCAC-1     2 0.000
#> AAGCGACTTTGACG-1     2 0.000
#> AAGGTCACGGTTAC-1     1 0.000
#> AAGTAACTCTGAAC-1     1 0.000
#> AAGTTCCTCATTCT-1     2 0.000
#> AATCCTTGACGGGA-1     1 0.000
#> AATCTCACAGCCTA-1     2 0.502
#> AATGATACGGTCAT-1     2 0.751
#> AATGCGTGGACGGA-1     1 0.249
#> AATGGAGAATCGTG-1     1 0.000
#> AATGTTGAGTTGAC-1     1 0.000
#> AATTACGAATTCCT-1     2 1.000
#> AATTGATGTCGCAA-1     2 0.000
#> ACAAATTGATTCTC-1     2 0.000
#> ACAAATTGCTCAGA-1     1 0.000
#> ACAAGAGAAGTCGT-1     2 0.249
#> ACACGATGATGTGC-1     1 0.000
#> ACAGCAACACCTAG-1     1 0.000
#> ACAGCAACCTCAAG-1     2 0.000
#> ACAGTGTGTTGCGA-1     1 0.000
#> ACATCACTCTACTT-1     1 0.000
#> ACATTCTGGGAACG-1     1 0.000
#> ACCAGTGAATACCG-1     2 0.000
#> ACCAGTGATGACTG-1     1 0.000
#> ACCCAAGAATTCCT-1     2 0.000
#> ACCCACTGCGCCTT-1     1 0.000
#> ACCCACTGTCGTAG-1     2 1.000
#> ACCCAGCTGTTAGC-1     1 0.000
#> ACCCTCGATAAGGA-1     2 0.253
#> ACCCTCGATCAAGC-1     1 1.000
#> ACCTATTGTGCCCT-1     2 0.000
#> ACCTGAGATATCGG-1     1 0.000
#> ACCTTTGACTCCCA-1     2 0.253
#> ACCTTTGAGGAACG-1     2 0.249
#> ACCTTTGAGGAAGC-1     2 0.000
#> ACGAACTGGCTATG-1     2 0.000
#> ACGACCCTATCTCT-1     2 0.000
#> ACGAGGGACAGGAG-1     2 0.000
#> ACGATCGAGTCACA-1     1 0.000
#> ACGCCACTGAACTC-1     1 0.751
#> ACGCCGGAAACCAC-1     1 0.000
#> ACGCCTTGCTCCCA-1     2 0.000
#> ACGGAACTGTCGTA-1     2 0.000
#> ACGGAGGACTCTTA-1     1 0.253
#> ACGGTATGAGTCGT-1     1 0.000
#> ACGTCAGAGAGCTT-1     1 0.249
#> ACGTCCTGATAAGG-1     1 0.000
#> ACGTCCTGTGAACC-1     2 0.000
#> ACGTCGCTCTATTC-1     1 0.249
#> ACGTGATGCCATGA-1     2 1.000
#> ACGTGATGTAACCG-1     2 0.000
#> ACGTTGGACCGTAA-1     1 0.000
#> ACGTTGGATCAGGT-1     2 0.498
#> ACTAAAACTCGACA-1     1 0.000
#> ACTCAGGATTCGTT-1     1 0.000
#> ACTCGCACGAAAGT-1     1 0.249
#> ACTCGCACTACGAC-1     1 0.000
#> ACTGAGACCCATAG-1     2 0.000
#> ACTGTTACCCACAA-1     1 0.000
#> ACTTAAGATTACTC-1     1 0.000
#> ACTTAGCTGCGTAT-1     2 0.000
#> ACTTGGGAGAAAGT-1     1 0.000
#> ACTTGGGATGTGAC-1     1 1.000
#> ACTTGGGATTGACG-1     2 1.000
#> ACTTTGTGGATAGA-1     2 1.000
#> AGAAAGTGGGGATG-1     1 0.000
#> AGACACTGTCAAGC-1     1 0.000
#> AGACCTGAAGTAGA-1     1 0.000
#> AGACGTACCTCTTA-1     1 0.000
#> AGACGTACTCGTGA-1     2 0.000
#> AGAGATGAGGTTTG-1     1 0.000
#> AGAGCGGAGGCAAG-1     2 0.000
#> AGAGTCTGGTCGTA-1     2 0.000
#> AGATATTGGCCAAT-1     2 0.751
#> AGATCGTGTCTGGA-1     1 0.249
#> AGATTAACGTTCTT-1     2 0.000
#> AGATTCCTCACTTT-1     1 0.000
#> AGATTCCTGACGAG-1     1 0.000
#> AGCACTGATGCTTT-1     2 0.253
#> AGCATCGAGCTTCC-1     1 0.000
#> AGCATCGATAACCG-1     2 1.000
#> AGCCAATGGGGAGT-1     2 0.000
#> AGCCTCACTGTCAG-1     2 0.000
#> AGCGTAACTGAGAA-1     2 0.000
#> AGCTGAACCATACG-1     2 0.000
#> AGCTGCCTTGGGAG-1     1 1.000
#> AGGAACCTCTTAGG-1     2 0.000
#> AGGGCGCTAACCAC-1     1 0.000
#> AGGGTGGACTCAAG-1     1 0.502
#> AGGGTTTGTTCATC-1     1 0.249
#> AGGTCTGATTCTCA-1     2 0.000
#> AGGTTCGAACCTCC-1     1 0.000
#> AGGTTCGAACGTAC-1     1 0.000
#> AGTAGGCTTGCCTC-1     2 0.000
#> AGTATAACTTGTCT-1     2 0.000
#> AGTCTACTAGGGTG-1     1 0.000
#> AGTCTACTTGCATG-1     2 0.000
#> AGTGACTGCAACTG-1     2 0.000
#> AGTGTTCTCACTTT-1     1 0.000
#> AGTTATGAACAGTC-1     1 0.000
#> AGTTCTACCAGCTA-1     1 0.000
#> ATAACAACATGCTG-1     1 0.000
#> ATAAGTTGGTACGT-1     1 1.000
#> ATAATGACTCGTGA-1     1 0.000
#> ATACCACTCGTACA-1     1 0.000
#> ATACCACTCTAAGC-1     2 0.000
#> ATACCGGAATGCTG-1     2 0.000
#> ATACCGGACATTTC-1     1 1.000
#> ATACCGGAGGTGTT-1     1 0.000
#> ATACGGACAGACTC-1     1 0.000
#> ATACGGACCTACTT-1     1 0.253
#> ATACGGACTCTGGA-1     1 0.000
#> ATACGTCTTAACGC-1     1 0.000
#> ATACTCTGCTTCGC-1     2 0.751
#> ATAGCGTGCCCTTG-1     1 0.000
#> ATAGCGTGGTATCG-1     1 0.000
#> ATAGGAGAAACAGA-1     2 0.249
#> ATAGTCCTAGTGTC-1     1 0.249
#> ATAGTTGACCCTCA-1     2 0.000
#> ATATAGTGGAATGA-1     1 0.000
#> ATATGCCTAGATCC-1     1 0.000
#> ATCAAATGAGCCTA-1     1 0.000
#> ATCAAATGGGTAAA-1     2 0.000
#> ATCCAGGACGCTAA-1     2 0.000
#> ATCCATACTCCTTA-1     1 0.000
#> ATCCATACTTCATC-1     2 0.000
#> ATCGACGAAACTGC-1     2 0.751
#> ATCGCAGAATCTCT-1     2 0.000
#> ATCGCGCTCAGAGG-1     1 0.000
#> ATCGTTTGCCTACC-1     2 1.000
#> ATCGTTTGGGTACT-1     1 0.000
#> ATCGTTTGTGCCAA-1     1 0.000
#> ATCTACACCCGCTT-1     1 0.000
#> ATCTCAACCTTGTT-1     1 0.000
#> ATCTGGGAAACCAC-1     2 0.502
#> ATCTGGGAAGTGTC-1     2 0.000
#> ATCTGTTGCCTTCG-1     2 0.000
#> ATCTTGACCTCCCA-1     1 0.000
#> ATGACGTGATCGGT-1     2 0.000
#> ATGATATGTTGTCT-1     2 0.000
#> ATGCACGATTGGTG-1     2 0.000
#> ATGCCAGACAGTCA-1     1 0.000
#> ATGCCGCTTGAACC-1     2 0.000
#> ATGCGATGCTATGG-1     2 1.000
#> ATGTAAACGGGATG-1     2 0.249
#> ATGTAAACTTCACT-1     1 1.000
#> ATGTACCTTTATCC-1     1 0.000
#> ATGTCACTAATGCC-1     1 0.000
#> ATGTTCACAGTCTG-1     1 0.000
#> ATTACCTGCCTTAT-1     1 0.000
#> ATTACCTGGAGGAC-1     2 0.000
#> ATTCCAACCATTGG-1     1 0.253
#> ATTCGACTGAATAG-1     1 0.000
#> ATTCGACTTTTGTC-1     2 0.000
#> ATTCGGGAAAGGCG-1     1 0.000
#> ATTGCACTGAGAGC-1     2 0.000
#> ATTGCACTGGAGCA-1     1 0.000
#> ATTGCACTTGCTTT-1     2 0.000
#> ATTGTAGATTCCCG-1     2 0.000
#> ATTTAGGAACCATG-1     2 0.000
#> ATTTCTCTACTTTC-1     2 0.000
#> ATTTCTCTCACTTT-1     2 0.000
#> ATTTGCACAAGATG-1     1 0.000
#> CAAAGCTGTTGCTT-1     1 0.000
#> CAAATTGATGGAGG-1     1 0.000
#> CAACCAGAGTTCAG-1     2 1.000
#> CAACCAGATAGAAG-1     1 0.000
#> CAACGATGCGCAAT-1     2 0.000
#> CAACGTGACTCCAC-1     2 0.502
#> CAACGTGATCAAGC-1     1 0.249
#> CAAGAAGACGTCTC-1     2 0.253
#> CAAGCTGACCATAG-1     2 0.000
#> CAAGTCGATAGCGT-1     1 0.000
#> CAATAAACGCCATA-1     1 0.000
#> CAATAATGAACTGC-1     1 0.000
#> CAATTCTGCTTGTT-1     2 1.000
#> CAATTCTGGCGTAT-1     2 0.000
#> CACAGATGGTTTCT-1     1 0.000
#> CACAGCCTTGCCAA-1     2 0.000
#> CACAGTGATGAAGA-1     1 0.000
#> CACTGAGACAGTCA-1     1 0.253
#> CACTGCTGAGACTC-1     2 0.000
#> CAGACCCTAAGGTA-1     2 0.000
#> CAGCAATGTCTACT-1     1 0.000
#> CAGCAATGTGAGGG-1     1 0.000
#> CAGCACCTGTAGGG-1     2 0.747
#> CAGCATGACAACCA-1     1 0.000
#> CAGCCTTGCTACCC-1     1 0.000
#> CAGCTAGATGTGAC-1     1 0.000
#> CAGCTCTGTCGTAG-1     2 1.000
#> CAGGAACTCTCAGA-1     1 0.000
#> CAGGCCGAATCTCT-1     2 0.000
#> CAGGTAACAGACTC-1     1 0.751
#> CAGTTGGAAAGAGT-1     2 0.000
#> CATAAAACGGAGCA-1     1 0.000
#> CATACTACGTACCA-1     1 0.249
#> CATACTTGGGTTAC-1     2 0.000
#> CATATAGACTAAGC-1     1 0.498
#> CATCAGGATCCTAT-1     2 0.000
#> CATCAGGATGCACA-1     2 0.000
#> CATCAGGATTTCGT-1     1 0.000
#> CATCATACCGCATA-1     2 0.000
#> CATCTCCTCGAACT-1     2 0.253
#> CATGCGCTAGTCAC-1     2 0.000
#> CATGCGCTCAGATC-1     1 0.000
#> CATGCGCTTTGCAG-1     2 0.000
#> CATGGCCTAGGGTG-1     1 0.000
#> CATGTTTGGGGATG-1     1 0.000
#> CATTAGCTCCACAA-1     1 0.000
#> CATTGACTAGCGGA-1     1 0.000
#> CATTGTACTTTGCT-1     2 0.000
#> CCAAAGTGCTACGA-1     2 1.000
#> CCAAAGTGTGAGAA-1     1 0.498
#> CCAACCTGACGTAC-1     1 0.000
#> CCAACCTGTTCGCC-1     1 0.000
#> CCAATTTGAACGTC-1     1 0.000
#> CCACCATGGACGAG-1     2 0.000
#> CCACTGACCCGCTT-1     1 0.000
#> CCACTGTGGGAAGC-1     1 0.000
#> CCACTTCTCGGGAA-1     2 0.253
#> CCAGCACTGCGATT-1     2 0.000
#> CCAGCGGAAAGGCG-1     1 0.000
#> CCAGCGGACGACTA-1     1 0.000
#> CCAGGTCTAGCATC-1     1 0.249
#> CCAGTCACACTGGT-1     1 0.000
#> CCATCCGATTCGCC-1     1 0.000
#> CCATCGTGCTAGAC-1     2 0.000
#> CCCAACACTTTGTC-1     2 1.000
#> CCCAACTGCAATCG-1     1 0.000
#> CCCAGACTGCCTTC-1     2 0.000
#> CCCAGACTTTCGCC-1     2 0.000
#> CCCAGTTGCAGTTG-1     2 0.000
#> CCCGGAGAAGGGTG-1     1 0.000
#> CCCTACGAATTGGC-1     1 0.502
#> CCCTTACTAACCAC-1     2 1.000
#> CCGAAAACCTTGTT-1     2 0.000
#> CCGACTACCCAGTA-1     2 1.000
#> CCGATAGAGTTGGT-1     2 0.498
#> CCGCGAGACACACA-1     1 0.000
#> CCGCTATGTGCAAC-1     2 0.751
#> CCGCTATGTGCACA-1     1 0.000
#> CCGTACACGTTGGT-1     2 1.000
#> CCTAAGGACTAGCA-1     1 0.000
#> CCTATAACGAGACG-1     1 1.000
#> CCTATAACTGCATG-1     2 0.249
#> CCTCGAACCCGTAA-1     2 0.000
#> CCTCTACTCTTCGC-1     1 0.000
#> CCTGCAACACGTTG-1     1 0.000
#> CCTTAATGTTCTAC-1     2 0.000
#> CCTTCACTGGAGTG-1     1 0.000
#> CCTTTAGATTCATC-1     1 0.000
#> CGAACATGCCCTAC-1     1 0.502
#> CGAATCGAGGAGCA-1     1 0.000
#> CGACTGCTTCCTCG-1     1 0.000
#> CGAGAACTTGTTCT-1     1 0.000
#> CGAGCGTGTATGCG-1     1 0.000
#> CGAGGCACTATGCG-1     2 0.502
#> CGAGGCTGGCAGTT-1     1 0.000
#> CGAGTATGTCACCC-1     2 0.000
#> CGATACGAACAGTC-1     2 0.502
#> CGATAGACCCGTAA-1     1 0.253
#> CGATAGACGTAGGG-1     1 0.000
#> CGATCAGATGTGAC-1     2 0.000
#> CGCACTTGTCACGA-1     1 0.000
#> CGCAGGACTTGTCT-1     2 0.000
#> CGCAGGTGCCATAG-1     2 0.000
#> CGCATAGATCACGA-1     1 0.000
#> CGCCTAACGAATGA-1     2 1.000
#> CGCGATCTCAGTCA-1     1 0.000
#> CGCGATCTGTTGAC-1     1 0.000
#> CGCTACTGAACAGA-1     2 1.000
#> CGCTCATGCATTTC-1     1 0.000
#> CGGATAACAACGAA-1     1 0.000
#> CGGATAACTCAGTG-1     1 0.000
#> CGGCACGACTACGA-1     2 0.000
#> CGGCATCTTCGTAG-1     1 0.000
#> CGGCGAACCAGTCA-1     2 0.000
#> CGTAGCCTCTCTCG-1     1 0.000
#> CGTAGCCTGTATGC-1     2 0.000
#> CGTCAAGAAAGGTA-1     1 0.000
#> CGTGCACTTATGGC-1     2 0.502
#> CGTGTAGAGTTCAG-1     1 0.000
#> CGTTAGGATCATTC-1     2 0.000
#> CTAACACTAGTGCT-1     2 0.502
#> CTAAGGACGCCATA-1     1 0.000
#> CTAATGCTTGTGGT-1     1 0.000
#> CTACGCACACCTAG-1     2 0.000
#> CTACGGCTTTCTTG-1     2 0.000
#> CTACTATGAACCAC-1     1 0.000
#> CTACTATGATGTGC-1     1 0.000
#> CTACTCCTGCCATA-1     1 0.000
#> CTAGAGACTTTGGG-1     2 0.000
#> CTAGGTGATGGTTG-1     2 0.000
#> CTATACTGAGGTTC-1     1 0.000
#> CTATACTGCGCTAA-1     1 0.000
#> CTATAGCTTCGCTC-1     1 0.000
#> CTATAGCTTGCCTC-1     1 0.000
#> CTATCCCTCCACCT-1     1 0.000
#> CTATTGACAAACGA-1     1 0.000
#> CTATTGACACTGGT-1     2 0.000
#> CTATTGACGGTGAG-1     2 0.000
#> CTCAATTGGTTGCA-1     1 0.000
#> CTCAGCACTGAACC-1     1 0.000
#> CTCAGCTGAACCTG-1     1 0.000
#> CTCAGGCTCGTTGA-1     2 0.000
#> CTCATTGATGCTTT-1     2 0.000
#> CTCCACGAGAGATA-1     2 0.000
#> CTCCGAACAAGTGA-1     2 0.000
#> CTCCTACTGCCTTC-1     1 0.000
#> CTCGAAGATTAGGC-1     1 0.000
#> CTCTAATGTCCAAG-1     1 0.000
#> CTGAAGTGAAGCCT-1     2 0.000
#> CTGATTTGGTGTTG-1     2 1.000
#> CTGCAGCTGGATTC-1     2 0.000
#> CTGCCAACTAACCG-1     1 1.000
#> CTGGCACTCAAGCT-1     1 0.000
#> CTGTATACGTACGT-1     2 0.000
#> CTGTGAGACAACCA-1     2 0.000
#> CTGTGAGACGAACT-1     1 0.000
#> CTGTGAGACTGTAG-1     1 0.000
#> CTTACAACTCCCGT-1     1 0.000
#> CTTCACCTACCTGA-1     2 0.000
#> CTTGATTGATCTTC-1     1 0.000
#> GAAACCTGGACTAC-1     2 0.000
#> GAAAGATGCTGATG-1     2 0.000
#> GAAAGATGCTTCGC-1     1 0.000
#> GAAAGTGAAAGTGA-1     2 0.000
#> GAAAGTGACCACAA-1     1 0.000
#> GAAATACTACCAAC-1     1 0.000
#> GAACACACGTGCAT-1     2 0.249
#> GAACAGCTAACTGC-1     2 0.000
#> GAACAGCTCTCAGA-1     2 0.000
#> GAACTGTGACCTGA-1     2 0.000
#> GAACTGTGCCAGTA-1     1 0.000
#> GAAGCGGACCTATT-1     2 0.000
#> GAAGCTACGAATGA-1     2 1.000
#> GAAGGGTGCTTAGG-1     1 0.000
#> GAAGGTCTTAAAGG-1     2 0.000
#> GAAGTAGATCCAAG-1     2 0.000
#> GAAGTCACCCTCGT-1     1 0.000
#> GAAGTGCTCCGCTT-1     2 0.000
#> GACAGTACGAGCTT-1     2 0.000
#> GACAGTACTTCGGA-1     2 0.000
#> GACATTCTCCACCT-1     2 0.000
#> GACCAAACGACTAC-1     1 0.249
#> GACCAAACGTATCG-1     1 0.751
#> GACCTCACGTACGT-1     2 0.747
#> GACGGCACGAGATA-1     2 0.498
#> GACGTCCTCTCAAG-1     1 0.000
#> GACTCCTGTTGGTG-1     1 0.000
#> GACTGAACCAATCG-1     1 0.000
#> GAGATAGAAAAAGC-1     2 0.249
#> GAGATCACGACAAA-1     2 0.000
#> GAGCATACTTTGCT-1     2 0.000
#> GAGCGCACGCGTAT-1     1 0.000
#> GAGCGCTGTCTTAC-1     1 0.000
#> GAGGTACTACTCAG-1     1 0.000
#> GAGGTACTTAGCGT-1     2 0.502
#> GAGGTTACTCGTTT-1     2 0.751
#> GAGGTTTGTAAGCC-1     1 0.000
#> GAGTTGTGCATGGT-1     1 0.000
#> GAGTTGTGGCGAGA-1     1 0.000
#> GAGTTGTGTATGCG-1     2 0.000
#> GATAAGGAGAAACA-1     1 0.000
#> GATAAGGATTCACT-1     1 0.000
#> GATACTCTTGACTG-1     1 0.000
#> GATAGAGATCACGA-1     1 0.000
#> GATAGCACGAAGGC-1     2 0.000
#> GATATATGTGGAGG-1     1 0.000
#> GATATCCTCCCGTT-1     1 0.000
#> GATATTGACGAGTT-1     2 0.000
#> GATCCGCTGGTCAT-1     1 0.751
#> GATCGATGTAAGGA-1     1 0.000
#> GATCTTACACCCAA-1     2 0.000
#> GATCTTACGAATAG-1     1 0.751
#> GATCTTACGAGATA-1     1 0.000
#> GATGCCCTGGCAAG-1     1 0.000
#> GATTCGGACAGGAG-1     2 1.000
#> GATTCGGAGAAGGC-1     2 0.000
#> GATTCTTGATTCGG-1     2 0.751
#> GATTTAGACACTCC-1     2 0.000
#> GATTTAGATTCGTT-1     1 0.000
#> GATTTGCTAACGGG-1     1 0.000
#> GCAACCCTCCTCGT-1     1 0.000
#> GCAATCGAGACGTT-1     2 0.000
#> GCAATCGATCCTTA-1     1 0.747
#> GCACAATGGTGCAT-1     1 0.000
#> GCACCACTCATGAC-1     1 0.000
#> GCACCACTGTTTGG-1     1 0.000
#> GCACCACTTTCGGA-1     1 0.498
#> GCACCTTGGGGAGT-1     2 0.249
#> GCACGGTGCTATGG-1     2 0.751
#> GCACTAGACCTTTA-1     2 0.000
#> GCCACGGAGGCGAA-1     1 0.000
#> GCCGACGAACTCTT-1     2 0.747
#> GCCGTACTGGCAAG-1     1 0.000
#> GCCTACACCACTGA-1     2 0.000
#> GCCTAGCTTCTCTA-1     2 0.000
#> GCCTGACTCTCAAG-1     1 0.000
#> GCGAGCACTTGCTT-1     1 0.502
#> GCGCACGACTTTAC-1     1 0.000
#> GCGGCAACTGTCGA-1     1 0.000
#> GCGTAAACACGGTT-1     2 0.000
#> GCGTAATGCACCAA-1     2 0.000
#> GCGTATGATGAGAA-1     2 0.751
#> GCTACCTGAGAAGT-1     1 0.000
#> GCTAGATGAGCTCA-1     1 0.000
#> GCTCAAGAACCATG-1     2 0.000
#> GCTCAAGAAGTCAC-1     2 0.249
#> GCTCGACTCTAGTG-1     1 0.000
#> GCTGATGAGGTATC-1     1 0.000
#> GCTTAACTACAGTC-1     1 0.000
#> GCTTAACTTAGACC-1     1 0.000
#> GGAACACTCACTTT-1     1 0.000
#> GGAACTTGAAGGTA-1     2 0.751
#> GGAACTTGCTCCAC-1     1 0.751
#> GGAAGGACATCGGT-1     1 0.000
#> GGAATCTGCTTGTT-1     1 0.000
#> GGACCCGAAGCTAC-1     2 0.751
#> GGACCGTGCTTACT-1     1 0.000
#> GGACCGTGGGAACG-1     2 0.000
#> GGACCTCTGTAAGA-1     1 0.751
#> GGACGAGAGTGTCA-1     1 0.000
#> GGAGCGCTACGCAT-1     2 0.249
#> GGAGGATGGTTGAC-1     1 0.747
#> GGAGGATGTCAGTG-1     1 0.502
#> GGATGTACGTCTTT-1     1 0.000
#> GGATTTCTTTGTCT-1     2 0.000
#> GGCAAGGACTTGGA-1     1 0.000
#> GGCACGTGGCTTAG-1     2 0.000
#> GGCCCAGAAAGTAG-1     1 0.000
#> GGCGCATGCCTAAG-1     2 0.000
#> GGCTCACTACTCAG-1     1 0.000
#> GGGAACGAAGCTCA-1     2 0.000
#> GGGAACGAGTGTCA-1     1 1.000
#> GGGAAGTGTTGAGC-1     1 0.000
#> GGGACCTGACCCTC-1     1 0.000
#> GGGATGGATGGTTG-1     1 0.000
#> GGGCAAGATGCATG-1     1 0.000
#> GGGCACACGGTGAG-1     2 0.000
#> GGGCCAACCTTGGA-1     2 0.000
#> GGGCCAACTACGCA-1     1 0.000
#> GGTACTGAACTCTT-1     1 0.000
#> GGTAGTACACTAGC-1     1 0.000
#> GGTAGTACGCCATA-1     1 0.000
#> GGTATCGAGACAAA-1     1 0.000
#> GGTCTAGAGAAACA-1     1 0.000
#> GGTCTAGATAGCGT-1     2 0.000
#> GGTGATACGACTAC-1     1 0.000
#> GGTGGAGATCTCTA-1     1 0.000
#> GTAACGTGACCTCC-1     2 0.249
#> GTAAGCTGGTACCA-1     1 0.000
#> GTAATAACCTTCTA-1     1 0.000
#> GTACCCTGACAGTC-1     2 0.000
#> GTAGACTGAGATGA-1     1 0.000
#> GTAGCAACAGTCGT-1     1 0.000
#> GTAGCAACGGTAGG-1     1 0.000
#> GTAGCATGTAAGCC-1     1 0.000
#> GTAGCTGAAGCTAC-1     2 0.000
#> GTAGGTACACGGGA-1     1 0.000
#> GTAGTGTGAGGCGA-1     1 0.000
#> GTATCACTGGTAGG-1     1 0.000
#> GTCAACGAGTGTAC-1     1 0.000
#> GTCCACTGGGTACT-1     2 0.000
#> GTCCCATGTGGTGT-1     2 0.000
#> GTCGAATGAAGGCG-1     2 0.000
#> GTCTAACTGGTCTA-1     2 0.000
#> GTCTAGGAGCTTCC-1     1 0.000
#> GTGATTCTCTCTCG-1     1 0.000
#> GTGGATTGCACTAG-1     2 0.000
#> GTTAACCTTGCTTT-1     2 0.000
#> GTTAGGTGCCAGTA-1     2 1.000
#> GTTAGGTGCCCAAA-1     2 0.000
#> GTTGAGTGGTCTTT-1     2 1.000
#> GTTGGATGTTTACC-1     2 0.000
#> GTTGTACTATTCCT-1     2 1.000
#> GTTTAAGACCATGA-1     1 0.000
#> TAACACCTTCGCTC-1     1 0.000
#> TAACACCTTCGTAG-1     2 1.000
#> TAACGTCTCAACCA-1     1 0.000
#> TAACTCACGAGGAC-1     1 0.000
#> TAACTCACGTATCG-1     1 0.000
#> TAAGAACTGTGTCA-1     1 0.000
#> TAAGATACGGTTCA-1     1 0.000
#> TAAGCGTGAGGTTC-1     1 0.000
#> TAAGCGTGGACAAA-1     2 0.000
#> TAAGCGTGTGCTCC-1     2 0.000
#> TAAGGCTGTCTCGC-1     2 0.498
#> TAATGTGACTGCAA-1     2 0.249
#> TACAATGAAAACAG-1     1 0.000
#> TACATCACCTGTTT-1     2 0.000
#> TACATCACTGAACC-1     2 0.000
#> TACCATTGCGGGAA-1     1 1.000
#> TACCATTGGGGATG-1     1 0.000
#> TACCATTGTGAGGG-1     1 0.000
#> TACGAGTGATGCTG-1     2 0.000
#> TACGATCTCACTGA-1     2 0.000
#> TACGCCACTCCCAC-1     2 0.000
#> TACGTTACCAAGCT-1     1 0.000
#> TACTAAGATGATGC-1     1 0.000
#> TACTACTGAACCTG-1     1 0.000
#> TACTCAACGGTCTA-1     1 0.000
#> TAGAAACTGCTTCC-1     1 0.000
#> TAGCATCTGCTGTA-1     2 0.000
#> TAGCCGCTTTCCAT-1     2 0.498
#> TAGGCTGATGCCTC-1     1 0.000
#> TAGGTTCTTCTTAC-1     2 0.000
#> TAGGTTCTTGCTGA-1     1 0.000
#> TAGTACCTAAGAAC-1     1 0.000
#> TATAAGACAGCTCA-1     2 0.000
#> TATAAGTGACACCA-1     2 0.000
#> TATAAGTGTATCGG-1     1 0.000
#> TATAAGTGTGGTGT-1     2 0.000
#> TATAGATGTTCCGC-1     2 0.000
#> TATCCAACCAGCTA-1     1 0.000
#> TATCGACTCGATAC-1     2 0.000
#> TATCGTACATTCCT-1     1 0.253
#> TATGAATGTTTGCT-1     2 0.000
#> TATGTCACTAACCG-1     2 0.000
#> TATGTGCTCCGATA-1     1 0.000
#> TATTGCTGAAGAAC-1     1 0.000
#> TATTTCCTATTGGC-1     1 0.000
#> TCAAGGACGGTGTT-1     1 0.000
#> TCAATCACAGTCGT-1     2 0.000
#> TCACAACTTTGCTT-1     1 0.000
#> TCACCCGAGACGGA-1     2 0.000
#> TCACCGTGCTCGCT-1     2 0.000
#> TCACCTCTTCCAAG-1     2 0.000
#> TCAGGATGCCTTTA-1     2 0.000
#> TCAGTTACCTACGA-1     1 1.000
#> TCATCAACTGTTCT-1     2 0.249
#> TCATTCGATACAGC-1     2 0.000
#> TCCACTCTGAGCTT-1     1 0.751
#> TCCCATCTCAAAGA-1     1 0.502
#> TCCCGAACTTCGCC-1     2 0.000
#> TCCCGATGCCTGAA-1     1 0.000
#> TCCGAAGACAATCG-1     1 0.000
#> TCGACCTGCCGATA-1     2 0.000
#> TCGACGCTTCTATC-1     1 0.000
#> TCGATTTGATGCCA-1     1 0.000
#> TCGATTTGCCTACC-1     1 0.000
#> TCTAACACGAGCAG-1     2 0.000
#> TCTAAGCTTCTAGG-1     2 0.000
#> TCTAAGCTTGTTCT-1     1 0.000
#> TCTACAACGACTAC-1     2 0.249
#> TCTAGACTTAGAAG-1     1 0.000
#> TCTAGTTGCACCAA-1     2 0.000
#> TCTATGTGAAGAGT-1     1 0.000
#> TCTTACGAACCTGA-1     1 0.000
#> TCTTCAGAGCTACA-1     2 0.000
#> TGAAATTGGTGAGG-1     1 0.747
#> TGAACCGACTACTT-1     2 0.000
#> TGAACCGATTCGGA-1     2 0.000
#> TGACGATGCAAAGA-1     1 0.000
#> TGACTGGAAGAGAT-1     1 0.000
#> TGACTTACAGTCTG-1     2 1.000
#> TGAGCTGAATGCTG-1     2 0.000
#> TGAGCTGACTGGAT-1     1 0.000
#> TGAGCTGATGCTAG-1     1 0.000
#> TGAGGACTCTCATT-1     1 0.000
#> TGAGGTACGAACCT-1     2 0.000
#> TGATACCTCACTAG-1     1 0.000
#> TGATCGGACTGACA-1     2 0.000
#> TGATCGGATATGCG-1     2 0.000
#> TGCAAGTGGGTAGG-1     1 0.000
#> TGCAATCTTCAGGT-1     2 0.000
#> TGCCAAGAGCAGTT-1     1 1.000
#> TGCCCAACCGCATA-1     2 0.000
#> TGCGATGAGTGCTA-1     1 0.751
#> TGCGCACTCTTGAG-1     1 0.000
#> TGCGTAGAATAAGG-1     1 0.000
#> TGCGTAGATGGTCA-1     2 0.000
#> TGCTATACGGTTCA-1     1 0.000
#> TGGAAAGAGGTCAT-1     2 0.000
#> TGGACCCTACACTG-1     1 0.000
#> TGGACCCTGGTACT-1     2 0.000
#> TGGAGACTATCAGC-1     1 0.000
#> TGGAGGGACGGAGA-1     1 1.000
#> TGGCACCTTCAGTG-1     2 0.502
#> TGGGTATGTTTGGG-1     1 0.000
#> TGGTAGTGCACTGA-1     1 0.249
#> TGGTTACTGACGTT-1     1 0.000
#> TGTAACCTTGCCTC-1     2 0.000
#> TGTACTTGCTCTAT-1     2 0.000
#> TGTAGGTGCTCTAT-1     2 0.000
#> TGTCAGGAGATGAA-1     2 0.000
#> TGTGAGACTGTCAG-1     2 0.000
#> TGTGAGTGAGTGCT-1     2 0.000
#> TGTTAAGACAAAGA-1     1 0.000
#> TGTTAAGATAAGGA-1     1 0.000
#> TGTTACACCGCATA-1     2 0.000
#> TGTTACACGACTAC-1     1 1.000
#> TTACCATGAATCGC-1     1 0.249
#> TTACGACTTGACAC-1     1 0.000
#> TTACTCGAAGAATG-1     1 0.000
#> TTACTCGACGCAAT-1     2 0.000
#> TTAGACCTCCTTTA-1     1 0.000
#> TTAGCTACTGTCCC-1     2 0.000
#> TTAGGGTGTCCTGC-1     2 0.000
#> TTAGGTCTACTTTC-1     1 0.000
#> TTATCCGAGAAAGT-1     2 0.000
#> TTATGGCTTATGGC-1     2 0.000
#> TTATTCCTATGCTG-1     2 0.000
#> TTCAACACCCCAAA-1     1 0.000
#> TTCAACACGGACGA-1     2 0.000
#> TTCAAGCTAAGAAC-1     1 0.502
#> TTCACAACCCGTTC-1     2 0.751
#> TTCACAACGTCTGA-1     1 1.000
#> TTCAGTACTCCTAT-1     1 0.000
#> TTCAGTTGTCCTTA-1     1 0.249
#> TTCATCGAGGTGGA-1     1 0.000
#> TTCATTCTATGTCG-1     1 0.253
#> TTCCAAACCTATGG-1     1 0.253
#> TTCCATGACGAGAG-1     1 0.000
#> TTCCCACTTGTCTT-1     1 0.000
#> TTCCTAGACTAGTG-1     2 0.000
#> TTCGAGGATAGAAG-1     2 0.000
#> TTCGGAGAATGCCA-1     1 0.000
#> TTCGTATGTCCTTA-1     2 0.000
#> TTCTAGTGCATGAC-1     1 0.000
#> TTCTAGTGGTCACA-1     2 0.000
#> TTCTTACTCTGGAT-1     2 0.000
#> TTGAATGAACTACG-1     2 0.000
#> TTGAGGACAGAACA-1     1 0.000
#> TTGAGGACTACGCA-1     2 0.000
#> TTGCATTGCTAAGC-1     1 0.000
#> TTGCTAACACGCTA-1     2 0.000
#> TTGCTATGGTACGT-1     2 0.253
#> TTGCTATGGTAGGG-1     2 0.000
#> TTGGAGACGCTATG-1     1 0.000
#> TTGGTACTACTGGT-1     2 0.000
#> TTTAGCTGGATACC-1     1 0.000
#> TTTAGCTGTACTCT-1     1 0.000
#> TTTAGGCTCCTTTA-1     1 0.000
#> TTTATCCTGTTGTG-1     2 0.000
#> TTTCAGTGTCTATC-1     1 1.000
#> TTTCGAACTCTCAT-1     1 0.000

show/hide code output

get_classes(res, k = 3)
#>                  class     p
#> AAACCGTGCTTCCG-1     3 0.747
#> AAACGCTGTTTCTG-1     1 1.000
#> AAAGAGACGCGAGA-1     3 0.000
#> AAAGCAGATATCGG-1     2 0.498
#> AAAGTTTGTAGCGT-1     1 0.000
#> AAATCAACCCTATT-1     2 0.249
#> AAATCATGACCACA-1     2 0.000
#> AAATGTTGAACGAA-1     1 0.000
#> AAATGTTGTGGCAT-1     3 0.000
#> AAATTCGAATCACG-1     1 0.000
#> AAATTCGAGCTGAT-1     2 0.000
#> AACACGTGGAACCT-1     1 0.000
#> AACACGTGTACGAC-1     2 0.000
#> AACAGCACAAGAGT-1     1 0.000
#> AACATTGATGGGAG-1     2 0.000
#> AACCAGTGATACCG-1     2 0.000
#> AACCGATGTTCTAC-1     1 0.498
#> AACCGCCTCTACGA-1     3 0.000
#> AACCTACTGTGAGG-1     3 0.000
#> AACCTTACTAACGC-1     2 0.000
#> AACCTTTGTACGCA-1     2 0.000
#> AACTCACTCAAGCT-1     3 0.000
#> AACTCACTTGGAGG-1     1 0.000
#> AACTCGGAAGGTCT-1     1 0.000
#> AACTGTCTCCCTTG-1     1 0.249
#> AAGACAGATTACCT-1     1 0.000
#> AAGATGGAGAACTC-1     3 0.498
#> AAGATGGAGATAAG-1     3 0.000
#> AAGATTACAGATCC-1     3 0.253
#> AAGATTACCCGTTC-1     3 0.498
#> AAGATTACCGCCTT-1     3 0.000
#> AAGATTACTCCTCG-1     1 0.249
#> AAGCCATGAACTGC-1     3 0.000
#> AAGCCATGACACGT-1     1 0.249
#> AAGCCTGACCGAAT-1     1 0.000
#> AAGCGACTCCTCAC-1     2 0.751
#> AAGCGACTTTGACG-1     2 0.000
#> AAGGTCACGGTTAC-1     1 0.000
#> AAGTAACTCTGAAC-1     1 0.000
#> AAGTTCCTCATTCT-1     2 0.000
#> AATCCTTGACGGGA-1     3 1.000
#> AATCTCACAGCCTA-1     3 0.000
#> AATGATACGGTCAT-1     3 0.000
#> AATGCGTGGACGGA-1     3 0.000
#> AATGGAGAATCGTG-1     1 0.000
#> AATGTTGAGTTGAC-1     1 0.000
#> AATTACGAATTCCT-1     3 0.000
#> AATTGATGTCGCAA-1     2 0.000
#> ACAAATTGATTCTC-1     2 0.000
#> ACAAATTGCTCAGA-1     1 0.000
#> ACAAGAGAAGTCGT-1     3 0.000
#> ACACGATGATGTGC-1     1 0.502
#> ACAGCAACACCTAG-1     1 0.000
#> ACAGCAACCTCAAG-1     2 0.000
#> ACAGTGTGTTGCGA-1     1 0.000
#> ACATCACTCTACTT-1     3 0.249
#> ACATTCTGGGAACG-1     3 0.253
#> ACCAGTGAATACCG-1     2 0.000
#> ACCAGTGATGACTG-1     1 0.000
#> ACCCAAGAATTCCT-1     2 0.000
#> ACCCACTGCGCCTT-1     1 0.000
#> ACCCACTGTCGTAG-1     3 0.000
#> ACCCAGCTGTTAGC-1     3 0.000
#> ACCCTCGATAAGGA-1     3 0.498
#> ACCCTCGATCAAGC-1     1 1.000
#> ACCTATTGTGCCCT-1     2 0.000
#> ACCTGAGATATCGG-1     1 0.498
#> ACCTTTGACTCCCA-1     3 0.000
#> ACCTTTGAGGAACG-1     3 0.000
#> ACCTTTGAGGAAGC-1     3 1.000
#> ACGAACTGGCTATG-1     2 0.000
#> ACGACCCTATCTCT-1     3 0.249
#> ACGAGGGACAGGAG-1     3 0.000
#> ACGATCGAGTCACA-1     1 0.249
#> ACGCCACTGAACTC-1     1 0.249
#> ACGCCGGAAACCAC-1     1 0.000
#> ACGCCTTGCTCCCA-1     2 0.000
#> ACGGAACTGTCGTA-1     2 0.000
#> ACGGAGGACTCTTA-1     1 0.249
#> ACGGTATGAGTCGT-1     1 0.000
#> ACGTCAGAGAGCTT-1     1 0.751
#> ACGTCCTGATAAGG-1     1 0.249
#> ACGTCCTGTGAACC-1     2 0.502
#> ACGTCGCTCTATTC-1     1 1.000
#> ACGTGATGCCATGA-1     3 0.000
#> ACGTGATGTAACCG-1     2 0.000
#> ACGTTGGACCGTAA-1     1 0.502
#> ACGTTGGATCAGGT-1     3 0.000
#> ACTAAAACTCGACA-1     1 0.000
#> ACTCAGGATTCGTT-1     1 0.000
#> ACTCGCACGAAAGT-1     3 0.000
#> ACTCGCACTACGAC-1     1 0.249
#> ACTGAGACCCATAG-1     2 0.000
#> ACTGTTACCCACAA-1     1 0.000
#> ACTTAAGATTACTC-1     3 0.000
#> ACTTAGCTGCGTAT-1     2 0.000
#> ACTTGGGAGAAAGT-1     3 0.000
#> ACTTGGGATGTGAC-1     1 1.000
#> ACTTGGGATTGACG-1     3 0.000
#> ACTTTGTGGATAGA-1     3 0.000
#> AGAAAGTGGGGATG-1     1 0.000
#> AGACACTGTCAAGC-1     1 0.000
#> AGACCTGAAGTAGA-1     1 0.502
#> AGACGTACCTCTTA-1     3 0.000
#> AGACGTACTCGTGA-1     2 0.000
#> AGAGATGAGGTTTG-1     1 0.000
#> AGAGCGGAGGCAAG-1     3 0.000
#> AGAGTCTGGTCGTA-1     2 0.000
#> AGATATTGGCCAAT-1     3 0.000
#> AGATCGTGTCTGGA-1     3 0.000
#> AGATTAACGTTCTT-1     2 0.000
#> AGATTCCTCACTTT-1     1 0.249
#> AGATTCCTGACGAG-1     3 0.249
#> AGCACTGATGCTTT-1     3 0.000
#> AGCATCGAGCTTCC-1     1 0.000
#> AGCATCGATAACCG-1     3 0.000
#> AGCCAATGGGGAGT-1     2 0.000
#> AGCCTCACTGTCAG-1     2 0.000
#> AGCGTAACTGAGAA-1     3 0.000
#> AGCTGAACCATACG-1     2 0.000
#> AGCTGCCTTGGGAG-1     1 0.751
#> AGGAACCTCTTAGG-1     2 0.000
#> AGGGCGCTAACCAC-1     1 0.000
#> AGGGTGGACTCAAG-1     1 0.498
#> AGGGTTTGTTCATC-1     1 1.000
#> AGGTCTGATTCTCA-1     2 0.502
#> AGGTTCGAACCTCC-1     1 0.000
#> AGGTTCGAACGTAC-1     1 0.000
#> AGTAGGCTTGCCTC-1     2 0.000
#> AGTATAACTTGTCT-1     2 0.000
#> AGTCTACTAGGGTG-1     1 0.000
#> AGTCTACTTGCATG-1     2 0.000
#> AGTGACTGCAACTG-1     2 0.000
#> AGTGTTCTCACTTT-1     1 0.249
#> AGTTATGAACAGTC-1     3 0.751
#> AGTTCTACCAGCTA-1     1 0.502
#> ATAACAACATGCTG-1     1 0.000
#> ATAAGTTGGTACGT-1     1 1.000
#> ATAATGACTCGTGA-1     1 0.249
#> ATACCACTCGTACA-1     1 0.000
#> ATACCACTCTAAGC-1     3 0.000
#> ATACCGGAATGCTG-1     3 0.000
#> ATACCGGACATTTC-1     3 0.498
#> ATACCGGAGGTGTT-1     1 0.000
#> ATACGGACAGACTC-1     1 0.000
#> ATACGGACCTACTT-1     1 0.000
#> ATACGGACTCTGGA-1     1 0.000
#> ATACGTCTTAACGC-1     1 0.000
#> ATACTCTGCTTCGC-1     3 0.000
#> ATAGCGTGCCCTTG-1     1 0.000
#> ATAGCGTGGTATCG-1     1 0.000
#> ATAGGAGAAACAGA-1     3 0.751
#> ATAGTCCTAGTGTC-1     1 1.000
#> ATAGTTGACCCTCA-1     2 0.000
#> ATATAGTGGAATGA-1     1 0.000
#> ATATGCCTAGATCC-1     1 0.000
#> ATCAAATGAGCCTA-1     1 0.747
#> ATCAAATGGGTAAA-1     2 0.000
#> ATCCAGGACGCTAA-1     2 0.000
#> ATCCATACTCCTTA-1     1 0.000
#> ATCCATACTTCATC-1     2 0.000
#> ATCGACGAAACTGC-1     3 0.000
#> ATCGCAGAATCTCT-1     2 0.000
#> ATCGCGCTCAGAGG-1     1 0.000
#> ATCGTTTGCCTACC-1     3 0.000
#> ATCGTTTGGGTACT-1     1 0.000
#> ATCGTTTGTGCCAA-1     1 0.000
#> ATCTACACCCGCTT-1     1 0.000
#> ATCTCAACCTTGTT-1     1 0.000
#> ATCTGGGAAACCAC-1     3 0.000
#> ATCTGGGAAGTGTC-1     3 0.000
#> ATCTGTTGCCTTCG-1     2 0.498
#> ATCTTGACCTCCCA-1     1 0.000
#> ATGACGTGATCGGT-1     2 0.000
#> ATGATATGTTGTCT-1     3 0.000
#> ATGCACGATTGGTG-1     2 0.249
#> ATGCCAGACAGTCA-1     1 0.498
#> ATGCCGCTTGAACC-1     3 0.000
#> ATGCGATGCTATGG-1     3 0.000
#> ATGTAAACGGGATG-1     3 0.000
#> ATGTAAACTTCACT-1     3 0.000
#> ATGTACCTTTATCC-1     1 0.000
#> ATGTCACTAATGCC-1     1 0.253
#> ATGTTCACAGTCTG-1     1 0.747
#> ATTACCTGCCTTAT-1     1 0.000
#> ATTACCTGGAGGAC-1     2 0.000
#> ATTCCAACCATTGG-1     3 0.498
#> ATTCGACTGAATAG-1     1 0.000
#> ATTCGACTTTTGTC-1     2 0.000
#> ATTCGGGAAAGGCG-1     1 0.253
#> ATTGCACTGAGAGC-1     2 0.000
#> ATTGCACTGGAGCA-1     1 0.000
#> ATTGCACTTGCTTT-1     2 0.000
#> ATTGTAGATTCCCG-1     3 0.000
#> ATTTAGGAACCATG-1     2 0.000
#> ATTTCTCTACTTTC-1     2 0.000
#> ATTTCTCTCACTTT-1     2 0.000
#> ATTTGCACAAGATG-1     1 0.000
#> CAAAGCTGTTGCTT-1     1 0.498
#> CAAATTGATGGAGG-1     1 0.000
#> CAACCAGAGTTCAG-1     3 0.000
#> CAACCAGATAGAAG-1     1 0.000
#> CAACGATGCGCAAT-1     2 0.000
#> CAACGTGACTCCAC-1     3 0.000
#> CAACGTGATCAAGC-1     1 0.751
#> CAAGAAGACGTCTC-1     3 0.000
#> CAAGCTGACCATAG-1     2 0.000
#> CAAGTCGATAGCGT-1     1 0.000
#> CAATAAACGCCATA-1     1 0.000
#> CAATAATGAACTGC-1     1 0.000
#> CAATTCTGCTTGTT-1     3 0.000
#> CAATTCTGGCGTAT-1     2 0.000
#> CACAGATGGTTTCT-1     3 0.253
#> CACAGCCTTGCCAA-1     2 0.000
#> CACAGTGATGAAGA-1     3 0.751
#> CACTGAGACAGTCA-1     1 0.000
#> CACTGCTGAGACTC-1     2 0.000
#> CAGACCCTAAGGTA-1     2 0.000
#> CAGCAATGTCTACT-1     1 0.249
#> CAGCAATGTGAGGG-1     1 0.000
#> CAGCACCTGTAGGG-1     3 0.000
#> CAGCATGACAACCA-1     3 0.000
#> CAGCCTTGCTACCC-1     1 0.000
#> CAGCTAGATGTGAC-1     1 0.000
#> CAGCTCTGTCGTAG-1     3 0.000
#> CAGGAACTCTCAGA-1     1 0.000
#> CAGGCCGAATCTCT-1     2 0.000
#> CAGGTAACAGACTC-1     1 0.000
#> CAGTTGGAAAGAGT-1     3 0.747
#> CATAAAACGGAGCA-1     1 0.000
#> CATACTACGTACCA-1     1 0.000
#> CATACTTGGGTTAC-1     2 0.000
#> CATATAGACTAAGC-1     3 0.000
#> CATCAGGATCCTAT-1     2 0.000
#> CATCAGGATGCACA-1     2 0.000
#> CATCAGGATTTCGT-1     1 0.000
#> CATCATACCGCATA-1     3 0.000
#> CATCTCCTCGAACT-1     3 0.249
#> CATGCGCTAGTCAC-1     2 0.000
#> CATGCGCTCAGATC-1     1 0.000
#> CATGCGCTTTGCAG-1     2 0.000
#> CATGGCCTAGGGTG-1     1 0.000
#> CATGTTTGGGGATG-1     1 0.000
#> CATTAGCTCCACAA-1     3 0.000
#> CATTGACTAGCGGA-1     1 0.000
#> CATTGTACTTTGCT-1     2 0.000
#> CCAAAGTGCTACGA-1     3 0.000
#> CCAAAGTGTGAGAA-1     1 0.000
#> CCAACCTGACGTAC-1     1 0.000
#> CCAACCTGTTCGCC-1     1 0.000
#> CCAATTTGAACGTC-1     3 0.000
#> CCACCATGGACGAG-1     2 0.000
#> CCACTGACCCGCTT-1     1 0.000
#> CCACTGTGGGAAGC-1     1 0.000
#> CCACTTCTCGGGAA-1     3 0.249
#> CCAGCACTGCGATT-1     2 0.000
#> CCAGCGGAAAGGCG-1     1 0.000
#> CCAGCGGACGACTA-1     1 0.000
#> CCAGGTCTAGCATC-1     1 0.249
#> CCAGTCACACTGGT-1     1 1.000
#> CCATCCGATTCGCC-1     1 0.000
#> CCATCGTGCTAGAC-1     2 0.000
#> CCCAACACTTTGTC-1     3 0.000
#> CCCAACTGCAATCG-1     1 0.000
#> CCCAGACTGCCTTC-1     2 0.747
#> CCCAGACTTTCGCC-1     2 0.000
#> CCCAGTTGCAGTTG-1     3 0.000
#> CCCGGAGAAGGGTG-1     1 0.000
#> CCCTACGAATTGGC-1     1 0.253
#> CCCTTACTAACCAC-1     3 0.000
#> CCGAAAACCTTGTT-1     2 0.000
#> CCGACTACCCAGTA-1     3 0.000
#> CCGATAGAGTTGGT-1     2 1.000
#> CCGCGAGACACACA-1     1 0.000
#> CCGCTATGTGCAAC-1     3 0.000
#> CCGCTATGTGCACA-1     3 0.000
#> CCGTACACGTTGGT-1     3 0.000
#> CCTAAGGACTAGCA-1     1 0.000
#> CCTATAACGAGACG-1     1 0.751
#> CCTATAACTGCATG-1     2 0.000
#> CCTCGAACCCGTAA-1     2 0.000
#> CCTCTACTCTTCGC-1     3 0.253
#> CCTGCAACACGTTG-1     1 1.000
#> CCTTAATGTTCTAC-1     2 0.000
#> CCTTCACTGGAGTG-1     1 0.000
#> CCTTTAGATTCATC-1     3 0.000
#> CGAACATGCCCTAC-1     1 0.751
#> CGAATCGAGGAGCA-1     1 0.000
#> CGACTGCTTCCTCG-1     1 0.000
#> CGAGAACTTGTTCT-1     1 0.000
#> CGAGCGTGTATGCG-1     1 0.000
#> CGAGGCACTATGCG-1     3 0.000
#> CGAGGCTGGCAGTT-1     1 0.249
#> CGAGTATGTCACCC-1     2 0.000
#> CGATACGAACAGTC-1     3 0.000
#> CGATAGACCCGTAA-1     1 0.000
#> CGATAGACGTAGGG-1     1 0.000
#> CGATCAGATGTGAC-1     3 0.000
#> CGCACTTGTCACGA-1     3 0.498
#> CGCAGGACTTGTCT-1     2 0.000
#> CGCAGGTGCCATAG-1     2 0.000
#> CGCATAGATCACGA-1     1 0.000
#> CGCCTAACGAATGA-1     3 0.000
#> CGCGATCTCAGTCA-1     3 0.000
#> CGCGATCTGTTGAC-1     1 0.000
#> CGCTACTGAACAGA-1     3 0.000
#> CGCTCATGCATTTC-1     1 0.000
#> CGGATAACAACGAA-1     1 0.000
#> CGGATAACTCAGTG-1     1 0.000
#> CGGCACGACTACGA-1     2 0.000
#> CGGCATCTTCGTAG-1     3 0.751
#> CGGCGAACCAGTCA-1     2 0.000
#> CGTAGCCTCTCTCG-1     1 0.000
#> CGTAGCCTGTATGC-1     2 0.000
#> CGTCAAGAAAGGTA-1     1 0.000
#> CGTGCACTTATGGC-1     3 0.000
#> CGTGTAGAGTTCAG-1     1 0.000
#> CGTTAGGATCATTC-1     3 0.000
#> CTAACACTAGTGCT-1     3 0.000
#> CTAAGGACGCCATA-1     1 0.498
#> CTAATGCTTGTGGT-1     1 0.000
#> CTACGCACACCTAG-1     2 0.000
#> CTACGGCTTTCTTG-1     3 0.249
#> CTACTATGAACCAC-1     3 0.000
#> CTACTATGATGTGC-1     1 0.000
#> CTACTCCTGCCATA-1     1 0.000
#> CTAGAGACTTTGGG-1     2 0.000
#> CTAGGTGATGGTTG-1     2 0.000
#> CTATACTGAGGTTC-1     1 0.000
#> CTATACTGCGCTAA-1     1 0.000
#> CTATAGCTTCGCTC-1     3 1.000
#> CTATAGCTTGCCTC-1     1 0.000
#> CTATCCCTCCACCT-1     1 0.000
#> CTATTGACAAACGA-1     1 0.000
#> CTATTGACACTGGT-1     2 1.000
#> CTATTGACGGTGAG-1     2 0.000
#> CTCAATTGGTTGCA-1     1 0.000
#> CTCAGCACTGAACC-1     1 0.000
#> CTCAGCTGAACCTG-1     1 0.000
#> CTCAGGCTCGTTGA-1     2 0.000
#> CTCATTGATGCTTT-1     2 0.498
#> CTCCACGAGAGATA-1     3 0.000
#> CTCCGAACAAGTGA-1     2 0.000
#> CTCCTACTGCCTTC-1     1 0.000
#> CTCGAAGATTAGGC-1     1 0.000
#> CTCTAATGTCCAAG-1     1 0.249
#> CTGAAGTGAAGCCT-1     2 0.000
#> CTGATTTGGTGTTG-1     3 0.000
#> CTGCAGCTGGATTC-1     2 0.000
#> CTGCCAACTAACCG-1     3 0.751
#> CTGGCACTCAAGCT-1     1 0.000
#> CTGTATACGTACGT-1     3 0.498
#> CTGTGAGACAACCA-1     2 0.000
#> CTGTGAGACGAACT-1     1 0.000
#> CTGTGAGACTGTAG-1     1 1.000
#> CTTACAACTCCCGT-1     1 0.000
#> CTTCACCTACCTGA-1     2 0.000
#> CTTGATTGATCTTC-1     1 0.000
#> GAAACCTGGACTAC-1     2 0.000
#> GAAAGATGCTGATG-1     2 0.000
#> GAAAGATGCTTCGC-1     1 0.000
#> GAAAGTGAAAGTGA-1     3 0.000
#> GAAAGTGACCACAA-1     3 0.000
#> GAAATACTACCAAC-1     1 0.000
#> GAACACACGTGCAT-1     3 0.000
#> GAACAGCTAACTGC-1     2 0.000
#> GAACAGCTCTCAGA-1     2 0.000
#> GAACTGTGACCTGA-1     2 0.000
#> GAACTGTGCCAGTA-1     1 0.751
#> GAAGCGGACCTATT-1     3 0.000
#> GAAGCTACGAATGA-1     3 0.000
#> GAAGGGTGCTTAGG-1     1 0.000
#> GAAGGTCTTAAAGG-1     3 0.000
#> GAAGTAGATCCAAG-1     2 0.000
#> GAAGTCACCCTCGT-1     1 0.000
#> GAAGTGCTCCGCTT-1     3 0.000
#> GACAGTACGAGCTT-1     2 0.000
#> GACAGTACTTCGGA-1     2 0.000
#> GACATTCTCCACCT-1     3 0.000
#> GACCAAACGACTAC-1     1 0.000
#> GACCAAACGTATCG-1     3 0.249
#> GACCTCACGTACGT-1     3 0.000
#> GACGGCACGAGATA-1     3 0.000
#> GACGTCCTCTCAAG-1     1 0.000
#> GACTCCTGTTGGTG-1     1 0.000
#> GACTGAACCAATCG-1     1 0.000
#> GAGATAGAAAAAGC-1     3 0.000
#> GAGATCACGACAAA-1     2 0.000
#> GAGCATACTTTGCT-1     2 0.000
#> GAGCGCACGCGTAT-1     1 0.000
#> GAGCGCTGTCTTAC-1     1 0.000
#> GAGGTACTACTCAG-1     1 0.000
#> GAGGTACTTAGCGT-1     3 0.747
#> GAGGTTACTCGTTT-1     3 0.000
#> GAGGTTTGTAAGCC-1     1 0.000
#> GAGTTGTGCATGGT-1     1 0.000
#> GAGTTGTGGCGAGA-1     1 0.000
#> GAGTTGTGTATGCG-1     2 0.000
#> GATAAGGAGAAACA-1     1 0.000
#> GATAAGGATTCACT-1     1 0.000
#> GATACTCTTGACTG-1     1 0.000
#> GATAGAGATCACGA-1     3 0.000
#> GATAGCACGAAGGC-1     3 0.000
#> GATATATGTGGAGG-1     1 1.000
#> GATATCCTCCCGTT-1     1 0.000
#> GATATTGACGAGTT-1     2 0.000
#> GATCCGCTGGTCAT-1     3 0.000
#> GATCGATGTAAGGA-1     1 0.000
#> GATCTTACACCCAA-1     2 0.000
#> GATCTTACGAATAG-1     1 0.249
#> GATCTTACGAGATA-1     1 0.000
#> GATGCCCTGGCAAG-1     1 0.000
#> GATTCGGACAGGAG-1     3 0.498
#> GATTCGGAGAAGGC-1     2 0.000
#> GATTCTTGATTCGG-1     3 0.000
#> GATTTAGACACTCC-1     2 0.000
#> GATTTAGATTCGTT-1     1 0.000
#> GATTTGCTAACGGG-1     1 0.000
#> GCAACCCTCCTCGT-1     1 0.000
#> GCAATCGAGACGTT-1     2 0.249
#> GCAATCGATCCTTA-1     3 0.000
#> GCACAATGGTGCAT-1     1 1.000
#> GCACCACTCATGAC-1     3 0.000
#> GCACCACTGTTTGG-1     1 0.000
#> GCACCACTTTCGGA-1     3 0.000
#> GCACCTTGGGGAGT-1     3 0.751
#> GCACGGTGCTATGG-1     3 0.000
#> GCACTAGACCTTTA-1     2 0.000
#> GCCACGGAGGCGAA-1     1 0.000
#> GCCGACGAACTCTT-1     3 0.249
#> GCCGTACTGGCAAG-1     1 0.000
#> GCCTACACCACTGA-1     2 0.000
#> GCCTAGCTTCTCTA-1     2 0.000
#> GCCTGACTCTCAAG-1     1 0.000
#> GCGAGCACTTGCTT-1     3 0.498
#> GCGCACGACTTTAC-1     1 0.000
#> GCGGCAACTGTCGA-1     1 0.000
#> GCGTAAACACGGTT-1     3 0.000
#> GCGTAATGCACCAA-1     2 0.000
#> GCGTATGATGAGAA-1     3 0.249
#> GCTACCTGAGAAGT-1     3 0.000
#> GCTAGATGAGCTCA-1     1 0.000
#> GCTCAAGAACCATG-1     2 0.000
#> GCTCAAGAAGTCAC-1     2 0.747
#> GCTCGACTCTAGTG-1     1 0.000
#> GCTGATGAGGTATC-1     1 0.000
#> GCTTAACTACAGTC-1     1 0.000
#> GCTTAACTTAGACC-1     1 0.000
#> GGAACACTCACTTT-1     1 0.000
#> GGAACTTGAAGGTA-1     3 0.000
#> GGAACTTGCTCCAC-1     3 0.000
#> GGAAGGACATCGGT-1     1 0.000
#> GGAATCTGCTTGTT-1     3 0.751
#> GGACCCGAAGCTAC-1     3 0.000
#> GGACCGTGCTTACT-1     1 0.000
#> GGACCGTGGGAACG-1     3 0.000
#> GGACCTCTGTAAGA-1     1 0.000
#> GGACGAGAGTGTCA-1     1 0.000
#> GGAGCGCTACGCAT-1     3 0.000
#> GGAGGATGGTTGAC-1     3 0.751
#> GGAGGATGTCAGTG-1     1 0.000
#> GGATGTACGTCTTT-1     1 0.000
#> GGATTTCTTTGTCT-1     3 0.000
#> GGCAAGGACTTGGA-1     3 0.000
#> GGCACGTGGCTTAG-1     2 0.000
#> GGCCCAGAAAGTAG-1     1 1.000
#> GGCGCATGCCTAAG-1     2 0.000
#> GGCTCACTACTCAG-1     3 0.000
#> GGGAACGAAGCTCA-1     2 0.000
#> GGGAACGAGTGTCA-1     1 1.000
#> GGGAAGTGTTGAGC-1     1 0.000
#> GGGACCTGACCCTC-1     3 0.498
#> GGGATGGATGGTTG-1     1 0.000
#> GGGCAAGATGCATG-1     1 0.000
#> GGGCACACGGTGAG-1     2 0.000
#> GGGCCAACCTTGGA-1     3 0.000
#> GGGCCAACTACGCA-1     1 0.747
#> GGTACTGAACTCTT-1     1 0.249
#> GGTAGTACACTAGC-1     1 0.249
#> GGTAGTACGCCATA-1     1 0.000
#> GGTATCGAGACAAA-1     1 0.000
#> GGTCTAGAGAAACA-1     1 0.000
#> GGTCTAGATAGCGT-1     3 0.000
#> GGTGATACGACTAC-1     1 0.502
#> GGTGGAGATCTCTA-1     1 0.000
#> GTAACGTGACCTCC-1     3 0.000
#> GTAAGCTGGTACCA-1     1 0.000
#> GTAATAACCTTCTA-1     1 0.000
#> GTACCCTGACAGTC-1     2 0.000
#> GTAGACTGAGATGA-1     1 0.000
#> GTAGCAACAGTCGT-1     1 0.000
#> GTAGCAACGGTAGG-1     1 0.000
#> GTAGCATGTAAGCC-1     1 0.000
#> GTAGCTGAAGCTAC-1     2 0.000
#> GTAGGTACACGGGA-1     1 0.000
#> GTAGTGTGAGGCGA-1     1 0.000
#> GTATCACTGGTAGG-1     1 0.253
#> GTCAACGAGTGTAC-1     1 0.502
#> GTCCACTGGGTACT-1     2 0.000
#> GTCCCATGTGGTGT-1     3 0.000
#> GTCGAATGAAGGCG-1     3 0.000
#> GTCTAACTGGTCTA-1     2 0.000
#> GTCTAGGAGCTTCC-1     3 0.000
#> GTGATTCTCTCTCG-1     1 0.000
#> GTGGATTGCACTAG-1     2 0.000
#> GTTAACCTTGCTTT-1     3 0.000
#> GTTAGGTGCCAGTA-1     3 0.000
#> GTTAGGTGCCCAAA-1     2 0.000
#> GTTGAGTGGTCTTT-1     3 0.000
#> GTTGGATGTTTACC-1     2 0.000
#> GTTGTACTATTCCT-1     3 0.000
#> GTTTAAGACCATGA-1     1 0.498
#> TAACACCTTCGCTC-1     3 0.000
#> TAACACCTTCGTAG-1     3 0.000
#> TAACGTCTCAACCA-1     1 0.000
#> TAACTCACGAGGAC-1     1 0.249
#> TAACTCACGTATCG-1     3 0.000
#> TAAGAACTGTGTCA-1     1 0.000
#> TAAGATACGGTTCA-1     1 0.751
#> TAAGCGTGAGGTTC-1     1 0.000
#> TAAGCGTGGACAAA-1     2 0.000
#> TAAGCGTGTGCTCC-1     2 0.000
#> TAAGGCTGTCTCGC-1     3 0.000
#> TAATGTGACTGCAA-1     3 0.000
#> TACAATGAAAACAG-1     1 0.253
#> TACATCACCTGTTT-1     2 0.000
#> TACATCACTGAACC-1     2 0.000
#> TACCATTGCGGGAA-1     1 1.000
#> TACCATTGGGGATG-1     1 0.000
#> TACCATTGTGAGGG-1     1 0.000
#> TACGAGTGATGCTG-1     3 0.498
#> TACGATCTCACTGA-1     2 0.751
#> TACGCCACTCCCAC-1     2 0.000
#> TACGTTACCAAGCT-1     1 0.249
#> TACTAAGATGATGC-1     1 0.000
#> TACTACTGAACCTG-1     1 0.000
#> TACTCAACGGTCTA-1     3 1.000
#> TAGAAACTGCTTCC-1     1 0.000
#> TAGCATCTGCTGTA-1     2 0.000
#> TAGCCGCTTTCCAT-1     3 0.498
#> TAGGCTGATGCCTC-1     1 0.000
#> TAGGTTCTTCTTAC-1     2 0.000
#> TAGGTTCTTGCTGA-1     3 0.249
#> TAGTACCTAAGAAC-1     1 0.249
#> TATAAGACAGCTCA-1     2 0.000
#> TATAAGTGACACCA-1     2 0.000
#> TATAAGTGTATCGG-1     1 0.000
#> TATAAGTGTGGTGT-1     2 0.000
#> TATAGATGTTCCGC-1     2 0.000
#> TATCCAACCAGCTA-1     1 0.000
#> TATCGACTCGATAC-1     2 0.000
#> TATCGTACATTCCT-1     3 1.000
#> TATGAATGTTTGCT-1     2 0.000
#> TATGTCACTAACCG-1     3 0.000
#> TATGTGCTCCGATA-1     1 0.000
#> TATTGCTGAAGAAC-1     1 0.000
#> TATTTCCTATTGGC-1     1 0.000
#> TCAAGGACGGTGTT-1     1 0.751
#> TCAATCACAGTCGT-1     2 0.000
#> TCACAACTTTGCTT-1     1 0.000
#> TCACCCGAGACGGA-1     2 0.747
#> TCACCGTGCTCGCT-1     2 0.000
#> TCACCTCTTCCAAG-1     2 0.000
#> TCAGGATGCCTTTA-1     2 0.000
#> TCAGTTACCTACGA-1     3 0.253
#> TCATCAACTGTTCT-1     3 0.751
#> TCATTCGATACAGC-1     2 0.000
#> TCCACTCTGAGCTT-1     3 0.253
#> TCCCATCTCAAAGA-1     3 0.249
#> TCCCGAACTTCGCC-1     2 0.000
#> TCCCGATGCCTGAA-1     1 0.000
#> TCCGAAGACAATCG-1     1 0.000
#> TCGACCTGCCGATA-1     2 0.000
#> TCGACGCTTCTATC-1     3 0.000
#> TCGATTTGATGCCA-1     1 0.000
#> TCGATTTGCCTACC-1     1 0.249
#> TCTAACACGAGCAG-1     3 0.000
#> TCTAAGCTTCTAGG-1     2 0.000
#> TCTAAGCTTGTTCT-1     1 0.000
#> TCTACAACGACTAC-1     3 0.000
#> TCTAGACTTAGAAG-1     1 0.000
#> TCTAGTTGCACCAA-1     3 0.751
#> TCTATGTGAAGAGT-1     1 0.000
#> TCTTACGAACCTGA-1     1 0.249
#> TCTTCAGAGCTACA-1     3 0.000
#> TGAAATTGGTGAGG-1     3 0.000
#> TGAACCGACTACTT-1     2 0.000
#> TGAACCGATTCGGA-1     2 0.000
#> TGACGATGCAAAGA-1     1 0.000
#> TGACTGGAAGAGAT-1     1 0.000
#> TGACTTACAGTCTG-1     3 0.000
#> TGAGCTGAATGCTG-1     2 0.000
#> TGAGCTGACTGGAT-1     1 0.000
#> TGAGCTGATGCTAG-1     1 0.000
#> TGAGGACTCTCATT-1     1 0.000
#> TGAGGTACGAACCT-1     2 0.000
#> TGATACCTCACTAG-1     1 0.000
#> TGATCGGACTGACA-1     2 0.000
#> TGATCGGATATGCG-1     2 0.000
#> TGCAAGTGGGTAGG-1     1 0.000
#> TGCAATCTTCAGGT-1     3 0.000
#> TGCCAAGAGCAGTT-1     2 1.000
#> TGCCCAACCGCATA-1     2 0.000
#> TGCGATGAGTGCTA-1     1 0.498
#> TGCGCACTCTTGAG-1     1 0.000
#> TGCGTAGAATAAGG-1     1 0.000
#> TGCGTAGATGGTCA-1     2 0.000
#> TGCTATACGGTTCA-1     1 1.000
#> TGGAAAGAGGTCAT-1     2 0.000
#> TGGACCCTACACTG-1     1 0.000
#> TGGACCCTGGTACT-1     2 0.747
#> TGGAGACTATCAGC-1     3 0.000
#> TGGAGGGACGGAGA-1     1 0.751
#> TGGCACCTTCAGTG-1     3 0.000
#> TGGGTATGTTTGGG-1     1 0.253
#> TGGTAGTGCACTGA-1     1 0.000
#> TGGTTACTGACGTT-1     1 0.498
#> TGTAACCTTGCCTC-1     3 0.000
#> TGTACTTGCTCTAT-1     2 0.000
#> TGTAGGTGCTCTAT-1     3 0.000
#> TGTCAGGAGATGAA-1     2 0.000
#> TGTGAGACTGTCAG-1     2 0.000
#> TGTGAGTGAGTGCT-1     2 0.000
#> TGTTAAGACAAAGA-1     1 0.000
#> TGTTAAGATAAGGA-1     1 0.000
#> TGTTACACCGCATA-1     2 0.000
#> TGTTACACGACTAC-1     2 0.249
#> TTACCATGAATCGC-1     1 0.000
#> TTACGACTTGACAC-1     1 0.000
#> TTACTCGAAGAATG-1     3 0.000
#> TTACTCGACGCAAT-1     3 0.000
#> TTAGACCTCCTTTA-1     1 0.000
#> TTAGCTACTGTCCC-1     2 0.502
#> TTAGGGTGTCCTGC-1     3 1.000
#> TTAGGTCTACTTTC-1     1 0.000
#> TTATCCGAGAAAGT-1     3 0.751
#> TTATGGCTTATGGC-1     3 0.000
#> TTATTCCTATGCTG-1     3 1.000
#> TTCAACACCCCAAA-1     1 0.000
#> TTCAACACGGACGA-1     2 0.000
#> TTCAAGCTAAGAAC-1     3 0.000
#> TTCACAACCCGTTC-1     3 0.000
#> TTCACAACGTCTGA-1     1 0.751
#> TTCAGTACTCCTAT-1     1 0.000
#> TTCAGTTGTCCTTA-1     3 0.747
#> TTCATCGAGGTGGA-1     1 0.000
#> TTCATTCTATGTCG-1     1 0.000
#> TTCCAAACCTATGG-1     1 0.000
#> TTCCATGACGAGAG-1     1 0.000
#> TTCCCACTTGTCTT-1     3 0.000
#> TTCCTAGACTAGTG-1     2 0.000
#> TTCGAGGATAGAAG-1     2 0.000
#> TTCGGAGAATGCCA-1     1 0.000
#> TTCGTATGTCCTTA-1     3 0.249
#> TTCTAGTGCATGAC-1     1 0.000
#> TTCTAGTGGTCACA-1     3 0.502
#> TTCTTACTCTGGAT-1     2 0.000
#> TTGAATGAACTACG-1     2 0.000
#> TTGAGGACAGAACA-1     1 0.000
#> TTGAGGACTACGCA-1     3 0.000
#> TTGCATTGCTAAGC-1     1 0.249
#> TTGCTAACACGCTA-1     2 0.253
#> TTGCTATGGTACGT-1     3 0.000
#> TTGCTATGGTAGGG-1     2 0.000
#> TTGGAGACGCTATG-1     1 0.000
#> TTGGTACTACTGGT-1     3 1.000
#> TTTAGCTGGATACC-1     1 0.000
#> TTTAGCTGTACTCT-1     3 0.000
#> TTTAGGCTCCTTTA-1     1 0.000
#> TTTATCCTGTTGTG-1     3 1.000
#> TTTCAGTGTCTATC-1     1 0.502
#> TTTCGAACTCTCAT-1     3 0.000

show/hide code output

get_classes(res, k = 4)
#>                  class     p
#> AAACCGTGCTTCCG-1     2 1.000
#> AAACGCTGTTTCTG-1     1 0.000
#> AAAGAGACGCGAGA-1     3 0.502
#> AAAGCAGATATCGG-1     2 0.751
#> AAAGTTTGTAGCGT-1     4 1.000
#> AAATCAACCCTATT-1     2 0.249
#> AAATCATGACCACA-1     2 0.000
#> AAATGTTGAACGAA-1     4 0.000
#> AAATGTTGTGGCAT-1     3 0.000
#> AAATTCGAATCACG-1     4 0.000
#> AAATTCGAGCTGAT-1     2 0.000
#> AACACGTGGAACCT-1     4 1.000
#> AACACGTGTACGAC-1     2 0.000
#> AACAGCACAAGAGT-1     1 0.000
#> AACATTGATGGGAG-1     2 0.000
#> AACCAGTGATACCG-1     2 0.000
#> AACCGATGTTCTAC-1     4 0.000
#> AACCGCCTCTACGA-1     3 0.000
#> AACCTACTGTGAGG-1     3 0.000
#> AACCTTACTAACGC-1     2 0.000
#> AACCTTTGTACGCA-1     2 0.000
#> AACTCACTCAAGCT-1     4 0.249
#> AACTCACTTGGAGG-1     4 0.000
#> AACTCGGAAGGTCT-1     1 0.000
#> AACTGTCTCCCTTG-1     4 0.000
#> AAGACAGATTACCT-1     4 0.498
#> AAGATGGAGAACTC-1     3 1.000
#> AAGATGGAGATAAG-1     3 0.000
#> AAGATTACAGATCC-1     3 0.751
#> AAGATTACCCGTTC-1     3 0.000
#> AAGATTACCGCCTT-1     3 0.000
#> AAGATTACTCCTCG-1     1 0.000
#> AAGCCATGAACTGC-1     3 0.000
#> AAGCCATGACACGT-1     1 0.751
#> AAGCCTGACCGAAT-1     1 0.000
#> AAGCGACTCCTCAC-1     2 0.502
#> AAGCGACTTTGACG-1     2 0.000
#> AAGGTCACGGTTAC-1     1 0.000
#> AAGTAACTCTGAAC-1     4 0.000
#> AAGTTCCTCATTCT-1     2 0.000
#> AATCCTTGACGGGA-1     4 0.000
#> AATCTCACAGCCTA-1     3 0.000
#> AATGATACGGTCAT-1     3 0.000
#> AATGCGTGGACGGA-1     4 0.249
#> AATGGAGAATCGTG-1     4 0.000
#> AATGTTGAGTTGAC-1     4 0.000
#> AATTACGAATTCCT-1     3 0.000
#> AATTGATGTCGCAA-1     2 0.000
#> ACAAATTGATTCTC-1     2 0.000
#> ACAAATTGCTCAGA-1     1 0.000
#> ACAAGAGAAGTCGT-1     3 0.000
#> ACACGATGATGTGC-1     4 0.000
#> ACAGCAACACCTAG-1     1 0.000
#> ACAGCAACCTCAAG-1     2 0.000
#> ACAGTGTGTTGCGA-1     4 0.000
#> ACATCACTCTACTT-1     4 0.751
#> ACATTCTGGGAACG-1     4 0.000
#> ACCAGTGAATACCG-1     2 0.000
#> ACCAGTGATGACTG-1     1 0.000
#> ACCCAAGAATTCCT-1     2 0.000
#> ACCCACTGCGCCTT-1     1 0.000
#> ACCCACTGTCGTAG-1     3 0.000
#> ACCCAGCTGTTAGC-1     4 0.000
#> ACCCTCGATAAGGA-1     3 0.751
#> ACCCTCGATCAAGC-1     1 0.000
#> ACCTATTGTGCCCT-1     2 0.000
#> ACCTGAGATATCGG-1     1 0.498
#> ACCTTTGACTCCCA-1     3 0.000
#> ACCTTTGAGGAACG-1     3 0.000
#> ACCTTTGAGGAAGC-1     3 0.751
#> ACGAACTGGCTATG-1     2 0.000
#> ACGACCCTATCTCT-1     3 0.502
#> ACGAGGGACAGGAG-1     3 0.000
#> ACGATCGAGTCACA-1     4 0.000
#> ACGCCACTGAACTC-1     1 0.000
#> ACGCCGGAAACCAC-1     4 0.000
#> ACGCCTTGCTCCCA-1     2 0.000
#> ACGGAACTGTCGTA-1     2 0.000
#> ACGGAGGACTCTTA-1     1 0.502
#> ACGGTATGAGTCGT-1     4 0.000
#> ACGTCAGAGAGCTT-1     3 0.498
#> ACGTCCTGATAAGG-1     4 0.000
#> ACGTCCTGTGAACC-1     2 1.000
#> ACGTCGCTCTATTC-1     4 0.000
#> ACGTGATGCCATGA-1     3 0.000
#> ACGTGATGTAACCG-1     2 0.000
#> ACGTTGGACCGTAA-1     1 1.000
#> ACGTTGGATCAGGT-1     3 0.000
#> ACTAAAACTCGACA-1     4 0.000
#> ACTCAGGATTCGTT-1     1 0.751
#> ACTCGCACGAAAGT-1     3 0.751
#> ACTCGCACTACGAC-1     4 0.000
#> ACTGAGACCCATAG-1     2 0.000
#> ACTGTTACCCACAA-1     1 0.498
#> ACTTAAGATTACTC-1     3 0.000
#> ACTTAGCTGCGTAT-1     2 0.000
#> ACTTGGGAGAAAGT-1     4 0.253
#> ACTTGGGATGTGAC-1     1 0.000
#> ACTTGGGATTGACG-1     3 0.498
#> ACTTTGTGGATAGA-1     3 0.000
#> AGAAAGTGGGGATG-1     4 0.000
#> AGACACTGTCAAGC-1     4 0.000
#> AGACCTGAAGTAGA-1     4 0.000
#> AGACGTACCTCTTA-1     4 0.000
#> AGACGTACTCGTGA-1     2 0.000
#> AGAGATGAGGTTTG-1     1 1.000
#> AGAGCGGAGGCAAG-1     3 0.000
#> AGAGTCTGGTCGTA-1     2 0.000
#> AGATATTGGCCAAT-1     3 0.000
#> AGATCGTGTCTGGA-1     3 0.498
#> AGATTAACGTTCTT-1     2 0.000
#> AGATTCCTCACTTT-1     4 0.000
#> AGATTCCTGACGAG-1     4 0.000
#> AGCACTGATGCTTT-1     3 0.000
#> AGCATCGAGCTTCC-1     4 0.249
#> AGCATCGATAACCG-1     3 0.502
#> AGCCAATGGGGAGT-1     2 0.000
#> AGCCTCACTGTCAG-1     2 0.751
#> AGCGTAACTGAGAA-1     3 0.000
#> AGCTGAACCATACG-1     2 0.000
#> AGCTGCCTTGGGAG-1     1 0.000
#> AGGAACCTCTTAGG-1     2 0.000
#> AGGGCGCTAACCAC-1     4 0.000
#> AGGGTGGACTCAAG-1     3 1.000
#> AGGGTTTGTTCATC-1     1 0.000
#> AGGTCTGATTCTCA-1     2 0.000
#> AGGTTCGAACCTCC-1     1 1.000
#> AGGTTCGAACGTAC-1     1 0.502
#> AGTAGGCTTGCCTC-1     2 0.000
#> AGTATAACTTGTCT-1     2 0.000
#> AGTCTACTAGGGTG-1     1 0.747
#> AGTCTACTTGCATG-1     2 0.000
#> AGTGACTGCAACTG-1     2 0.000
#> AGTGTTCTCACTTT-1     4 0.000
#> AGTTATGAACAGTC-1     4 0.000
#> AGTTCTACCAGCTA-1     4 1.000
#> ATAACAACATGCTG-1     1 0.000
#> ATAAGTTGGTACGT-1     1 0.000
#> ATAATGACTCGTGA-1     1 0.000
#> ATACCACTCGTACA-1     4 0.000
#> ATACCACTCTAAGC-1     3 0.000
#> ATACCGGAATGCTG-1     3 0.000
#> ATACCGGACATTTC-1     3 0.000
#> ATACCGGAGGTGTT-1     4 0.498
#> ATACGGACAGACTC-1     1 0.000
#> ATACGGACCTACTT-1     1 0.000
#> ATACGGACTCTGGA-1     1 0.747
#> ATACGTCTTAACGC-1     1 0.751
#> ATACTCTGCTTCGC-1     3 0.000
#> ATAGCGTGCCCTTG-1     4 0.000
#> ATAGCGTGGTATCG-1     1 1.000
#> ATAGGAGAAACAGA-1     3 0.249
#> ATAGTCCTAGTGTC-1     4 0.498
#> ATAGTTGACCCTCA-1     2 0.000
#> ATATAGTGGAATGA-1     1 0.249
#> ATATGCCTAGATCC-1     1 0.249
#> ATCAAATGAGCCTA-1     4 0.249
#> ATCAAATGGGTAAA-1     2 0.000
#> ATCCAGGACGCTAA-1     2 0.000
#> ATCCATACTCCTTA-1     4 0.249
#> ATCCATACTTCATC-1     2 0.000
#> ATCGACGAAACTGC-1     3 0.000
#> ATCGCAGAATCTCT-1     2 0.000
#> ATCGCGCTCAGAGG-1     4 0.000
#> ATCGTTTGCCTACC-1     3 0.000
#> ATCGTTTGGGTACT-1     4 0.000
#> ATCGTTTGTGCCAA-1     1 0.000
#> ATCTACACCCGCTT-1     1 0.000
#> ATCTCAACCTTGTT-1     4 0.000
#> ATCTGGGAAACCAC-1     3 0.000
#> ATCTGGGAAGTGTC-1     3 0.000
#> ATCTGTTGCCTTCG-1     2 0.502
#> ATCTTGACCTCCCA-1     1 0.000
#> ATGACGTGATCGGT-1     2 0.000
#> ATGATATGTTGTCT-1     3 0.000
#> ATGCACGATTGGTG-1     2 0.502
#> ATGCCAGACAGTCA-1     1 0.249
#> ATGCCGCTTGAACC-1     3 0.000
#> ATGCGATGCTATGG-1     3 0.000
#> ATGTAAACGGGATG-1     3 0.000
#> ATGTAAACTTCACT-1     3 0.000
#> ATGTACCTTTATCC-1     1 0.000
#> ATGTCACTAATGCC-1     4 0.000
#> ATGTTCACAGTCTG-1     4 0.747
#> ATTACCTGCCTTAT-1     4 0.000
#> ATTACCTGGAGGAC-1     2 0.000
#> ATTCCAACCATTGG-1     3 0.751
#> ATTCGACTGAATAG-1     4 0.000
#> ATTCGACTTTTGTC-1     2 0.000
#> ATTCGGGAAAGGCG-1     4 0.000
#> ATTGCACTGAGAGC-1     2 0.000
#> ATTGCACTGGAGCA-1     1 0.000
#> ATTGCACTTGCTTT-1     2 0.000
#> ATTGTAGATTCCCG-1     3 0.000
#> ATTTAGGAACCATG-1     2 0.000
#> ATTTCTCTACTTTC-1     2 0.000
#> ATTTCTCTCACTTT-1     2 0.000
#> ATTTGCACAAGATG-1     1 0.747
#> CAAAGCTGTTGCTT-1     4 0.000
#> CAAATTGATGGAGG-1     1 0.000
#> CAACCAGAGTTCAG-1     3 0.000
#> CAACCAGATAGAAG-1     1 0.498
#> CAACGATGCGCAAT-1     2 0.000
#> CAACGTGACTCCAC-1     3 0.000
#> CAACGTGATCAAGC-1     1 0.502
#> CAAGAAGACGTCTC-1     3 0.000
#> CAAGCTGACCATAG-1     2 0.000
#> CAAGTCGATAGCGT-1     1 0.000
#> CAATAAACGCCATA-1     1 0.000
#> CAATAATGAACTGC-1     4 0.000
#> CAATTCTGCTTGTT-1     3 0.502
#> CAATTCTGGCGTAT-1     2 0.000
#> CACAGATGGTTTCT-1     4 1.000
#> CACAGCCTTGCCAA-1     2 0.000
#> CACAGTGATGAAGA-1     4 0.000
#> CACTGAGACAGTCA-1     1 0.000
#> CACTGCTGAGACTC-1     2 0.000
#> CAGACCCTAAGGTA-1     2 0.000
#> CAGCAATGTCTACT-1     4 0.000
#> CAGCAATGTGAGGG-1     1 0.000
#> CAGCACCTGTAGGG-1     3 0.249
#> CAGCATGACAACCA-1     4 0.498
#> CAGCCTTGCTACCC-1     4 0.000
#> CAGCTAGATGTGAC-1     1 0.000
#> CAGCTCTGTCGTAG-1     3 0.249
#> CAGGAACTCTCAGA-1     1 0.249
#> CAGGCCGAATCTCT-1     2 0.000
#> CAGGTAACAGACTC-1     4 0.751
#> CAGTTGGAAAGAGT-1     3 0.249
#> CATAAAACGGAGCA-1     4 0.000
#> CATACTACGTACCA-1     1 0.751
#> CATACTTGGGTTAC-1     2 0.000
#> CATATAGACTAAGC-1     3 0.000
#> CATCAGGATCCTAT-1     2 0.000
#> CATCAGGATGCACA-1     2 0.000
#> CATCAGGATTTCGT-1     1 0.498
#> CATCATACCGCATA-1     3 0.000
#> CATCTCCTCGAACT-1     2 1.000
#> CATGCGCTAGTCAC-1     2 0.000
#> CATGCGCTCAGATC-1     4 0.502
#> CATGCGCTTTGCAG-1     2 0.000
#> CATGGCCTAGGGTG-1     1 0.498
#> CATGTTTGGGGATG-1     4 0.000
#> CATTAGCTCCACAA-1     4 0.249
#> CATTGACTAGCGGA-1     4 0.000
#> CATTGTACTTTGCT-1     2 0.000
#> CCAAAGTGCTACGA-1     3 0.498
#> CCAAAGTGTGAGAA-1     1 0.000
#> CCAACCTGACGTAC-1     4 0.000
#> CCAACCTGTTCGCC-1     4 0.000
#> CCAATTTGAACGTC-1     4 0.000
#> CCACCATGGACGAG-1     2 0.000
#> CCACTGACCCGCTT-1     4 0.000
#> CCACTGTGGGAAGC-1     1 0.000
#> CCACTTCTCGGGAA-1     3 0.000
#> CCAGCACTGCGATT-1     2 0.000
#> CCAGCGGAAAGGCG-1     1 1.000
#> CCAGCGGACGACTA-1     4 0.000
#> CCAGGTCTAGCATC-1     1 0.249
#> CCAGTCACACTGGT-1     4 0.000
#> CCATCCGATTCGCC-1     1 0.000
#> CCATCGTGCTAGAC-1     2 0.000
#> CCCAACACTTTGTC-1     3 0.000
#> CCCAACTGCAATCG-1     1 0.000
#> CCCAGACTGCCTTC-1     2 0.751
#> CCCAGACTTTCGCC-1     2 0.000
#> CCCAGTTGCAGTTG-1     3 0.000
#> CCCGGAGAAGGGTG-1     1 1.000
#> CCCTACGAATTGGC-1     1 0.000
#> CCCTTACTAACCAC-1     3 0.000
#> CCGAAAACCTTGTT-1     2 0.000
#> CCGACTACCCAGTA-1     3 0.000
#> CCGATAGAGTTGGT-1     2 1.000
#> CCGCGAGACACACA-1     4 0.000
#> CCGCTATGTGCAAC-1     3 0.000
#> CCGCTATGTGCACA-1     4 0.000
#> CCGTACACGTTGGT-1     3 0.253
#> CCTAAGGACTAGCA-1     1 0.000
#> CCTATAACGAGACG-1     1 0.000
#> CCTATAACTGCATG-1     2 0.000
#> CCTCGAACCCGTAA-1     2 0.000
#> CCTCTACTCTTCGC-1     4 0.000
#> CCTGCAACACGTTG-1     4 0.000
#> CCTTAATGTTCTAC-1     2 0.000
#> CCTTCACTGGAGTG-1     4 1.000
#> CCTTTAGATTCATC-1     3 0.502
#> CGAACATGCCCTAC-1     4 0.249
#> CGAATCGAGGAGCA-1     1 0.000
#> CGACTGCTTCCTCG-1     1 0.502
#> CGAGAACTTGTTCT-1     4 0.000
#> CGAGCGTGTATGCG-1     1 0.000
#> CGAGGCACTATGCG-1     3 0.000
#> CGAGGCTGGCAGTT-1     4 0.249
#> CGAGTATGTCACCC-1     2 0.000
#> CGATACGAACAGTC-1     3 0.000
#> CGATAGACCCGTAA-1     1 0.000
#> CGATAGACGTAGGG-1     1 0.000
#> CGATCAGATGTGAC-1     3 0.000
#> CGCACTTGTCACGA-1     4 0.502
#> CGCAGGACTTGTCT-1     2 0.000
#> CGCAGGTGCCATAG-1     2 0.000
#> CGCATAGATCACGA-1     1 0.249
#> CGCCTAACGAATGA-1     3 0.000
#> CGCGATCTCAGTCA-1     4 0.249
#> CGCGATCTGTTGAC-1     4 0.000
#> CGCTACTGAACAGA-1     3 0.000
#> CGCTCATGCATTTC-1     4 0.498
#> CGGATAACAACGAA-1     4 0.000
#> CGGATAACTCAGTG-1     1 0.000
#> CGGCACGACTACGA-1     2 0.000
#> CGGCATCTTCGTAG-1     4 0.249
#> CGGCGAACCAGTCA-1     2 0.249
#> CGTAGCCTCTCTCG-1     4 0.000
#> CGTAGCCTGTATGC-1     2 0.000
#> CGTCAAGAAAGGTA-1     1 0.000
#> CGTGCACTTATGGC-1     3 0.000
#> CGTGTAGAGTTCAG-1     4 0.000
#> CGTTAGGATCATTC-1     3 0.000
#> CTAACACTAGTGCT-1     3 0.000
#> CTAAGGACGCCATA-1     4 0.000
#> CTAATGCTTGTGGT-1     1 0.498
#> CTACGCACACCTAG-1     2 0.000
#> CTACGGCTTTCTTG-1     3 0.000
#> CTACTATGAACCAC-1     4 0.000
#> CTACTATGATGTGC-1     1 0.498
#> CTACTCCTGCCATA-1     1 0.000
#> CTAGAGACTTTGGG-1     2 0.000
#> CTAGGTGATGGTTG-1     2 0.000
#> CTATACTGAGGTTC-1     1 1.000
#> CTATACTGCGCTAA-1     1 1.000
#> CTATAGCTTCGCTC-1     4 0.751
#> CTATAGCTTGCCTC-1     4 0.000
#> CTATCCCTCCACCT-1     4 0.000
#> CTATTGACAAACGA-1     1 0.000
#> CTATTGACACTGGT-1     3 1.000
#> CTATTGACGGTGAG-1     2 0.249
#> CTCAATTGGTTGCA-1     1 0.249
#> CTCAGCACTGAACC-1     1 0.000
#> CTCAGCTGAACCTG-1     4 0.000
#> CTCAGGCTCGTTGA-1     2 0.000
#> CTCATTGATGCTTT-1     2 0.000
#> CTCCACGAGAGATA-1     3 0.000
#> CTCCGAACAAGTGA-1     2 0.000
#> CTCCTACTGCCTTC-1     1 0.000
#> CTCGAAGATTAGGC-1     4 0.000
#> CTCTAATGTCCAAG-1     4 0.000
#> CTGAAGTGAAGCCT-1     2 0.000
#> CTGATTTGGTGTTG-1     3 0.000
#> CTGCAGCTGGATTC-1     2 0.000
#> CTGCCAACTAACCG-1     3 0.498
#> CTGGCACTCAAGCT-1     4 0.000
#> CTGTATACGTACGT-1     3 0.249
#> CTGTGAGACAACCA-1     2 0.000
#> CTGTGAGACGAACT-1     4 0.000
#> CTGTGAGACTGTAG-1     4 0.000
#> CTTACAACTCCCGT-1     1 0.498
#> CTTCACCTACCTGA-1     2 0.000
#> CTTGATTGATCTTC-1     1 1.000
#> GAAACCTGGACTAC-1     2 0.000
#> GAAAGATGCTGATG-1     2 0.000
#> GAAAGATGCTTCGC-1     4 0.000
#> GAAAGTGAAAGTGA-1     3 0.000
#> GAAAGTGACCACAA-1     3 0.502
#> GAAATACTACCAAC-1     1 0.000
#> GAACACACGTGCAT-1     3 0.000
#> GAACAGCTAACTGC-1     2 0.000
#> GAACAGCTCTCAGA-1     2 0.000
#> GAACTGTGACCTGA-1     2 0.000
#> GAACTGTGCCAGTA-1     4 0.747
#> GAAGCGGACCTATT-1     3 0.249
#> GAAGCTACGAATGA-1     3 0.000
#> GAAGGGTGCTTAGG-1     4 0.000
#> GAAGGTCTTAAAGG-1     3 0.000
#> GAAGTAGATCCAAG-1     2 0.000
#> GAAGTCACCCTCGT-1     4 0.000
#> GAAGTGCTCCGCTT-1     3 0.000
#> GACAGTACGAGCTT-1     2 0.000
#> GACAGTACTTCGGA-1     2 0.000
#> GACATTCTCCACCT-1     3 0.000
#> GACCAAACGACTAC-1     3 0.751
#> GACCAAACGTATCG-1     3 0.000
#> GACCTCACGTACGT-1     3 0.249
#> GACGGCACGAGATA-1     3 0.502
#> GACGTCCTCTCAAG-1     4 0.000
#> GACTCCTGTTGGTG-1     4 0.000
#> GACTGAACCAATCG-1     4 0.000
#> GAGATAGAAAAAGC-1     3 0.000
#> GAGATCACGACAAA-1     2 0.000
#> GAGCATACTTTGCT-1     2 0.000
#> GAGCGCACGCGTAT-1     1 0.751
#> GAGCGCTGTCTTAC-1     4 0.000
#> GAGGTACTACTCAG-1     1 0.498
#> GAGGTACTTAGCGT-1     4 1.000
#> GAGGTTACTCGTTT-1     3 0.000
#> GAGGTTTGTAAGCC-1     1 0.000
#> GAGTTGTGCATGGT-1     1 0.000
#> GAGTTGTGGCGAGA-1     1 1.000
#> GAGTTGTGTATGCG-1     2 0.000
#> GATAAGGAGAAACA-1     1 0.000
#> GATAAGGATTCACT-1     4 0.000
#> GATACTCTTGACTG-1     4 0.000
#> GATAGAGATCACGA-1     4 0.747
#> GATAGCACGAAGGC-1     3 0.000
#> GATATATGTGGAGG-1     4 0.000
#> GATATCCTCCCGTT-1     1 0.253
#> GATATTGACGAGTT-1     2 0.000
#> GATCCGCTGGTCAT-1     3 0.000
#> GATCGATGTAAGGA-1     4 0.000
#> GATCTTACACCCAA-1     2 0.000
#> GATCTTACGAATAG-1     1 0.000
#> GATCTTACGAGATA-1     4 0.000
#> GATGCCCTGGCAAG-1     4 0.000
#> GATTCGGACAGGAG-1     3 0.498
#> GATTCGGAGAAGGC-1     2 0.000
#> GATTCTTGATTCGG-1     3 0.000
#> GATTTAGACACTCC-1     2 0.000
#> GATTTAGATTCGTT-1     1 0.747
#> GATTTGCTAACGGG-1     1 0.249
#> GCAACCCTCCTCGT-1     1 0.000
#> GCAATCGAGACGTT-1     2 0.751
#> GCAATCGATCCTTA-1     3 0.000
#> GCACAATGGTGCAT-1     4 0.000
#> GCACCACTCATGAC-1     4 0.000
#> GCACCACTGTTTGG-1     1 0.000
#> GCACCACTTTCGGA-1     3 0.000
#> GCACCTTGGGGAGT-1     3 0.000
#> GCACGGTGCTATGG-1     3 0.000
#> GCACTAGACCTTTA-1     2 0.000
#> GCCACGGAGGCGAA-1     1 0.000
#> GCCGACGAACTCTT-1     3 0.000
#> GCCGTACTGGCAAG-1     1 0.000
#> GCCTACACCACTGA-1     2 0.000
#> GCCTAGCTTCTCTA-1     2 0.000
#> GCCTGACTCTCAAG-1     4 0.000
#> GCGAGCACTTGCTT-1     3 0.000
#> GCGCACGACTTTAC-1     4 0.000
#> GCGGCAACTGTCGA-1     1 0.249
#> GCGTAAACACGGTT-1     3 0.000
#> GCGTAATGCACCAA-1     2 0.000
#> GCGTATGATGAGAA-1     3 0.000
#> GCTACCTGAGAAGT-1     3 0.249
#> GCTAGATGAGCTCA-1     4 0.253
#> GCTCAAGAACCATG-1     2 0.000
#> GCTCAAGAAGTCAC-1     2 0.751
#> GCTCGACTCTAGTG-1     1 0.249
#> GCTGATGAGGTATC-1     4 0.000
#> GCTTAACTACAGTC-1     1 0.000
#> GCTTAACTTAGACC-1     1 1.000
#> GGAACACTCACTTT-1     1 0.000
#> GGAACTTGAAGGTA-1     3 0.000
#> GGAACTTGCTCCAC-1     3 0.000
#> GGAAGGACATCGGT-1     4 0.000
#> GGAATCTGCTTGTT-1     3 0.747
#> GGACCCGAAGCTAC-1     3 0.000
#> GGACCGTGCTTACT-1     4 0.751
#> GGACCGTGGGAACG-1     3 0.000
#> GGACCTCTGTAAGA-1     1 0.000
#> GGACGAGAGTGTCA-1     1 0.000
#> GGAGCGCTACGCAT-1     3 0.000
#> GGAGGATGGTTGAC-1     3 0.000
#> GGAGGATGTCAGTG-1     1 0.000
#> GGATGTACGTCTTT-1     1 0.000
#> GGATTTCTTTGTCT-1     3 0.000
#> GGCAAGGACTTGGA-1     3 0.249
#> GGCACGTGGCTTAG-1     2 0.000
#> GGCCCAGAAAGTAG-1     4 0.000
#> GGCGCATGCCTAAG-1     2 0.000
#> GGCTCACTACTCAG-1     4 0.000
#> GGGAACGAAGCTCA-1     2 0.000
#> GGGAACGAGTGTCA-1     1 0.000
#> GGGAAGTGTTGAGC-1     1 0.000
#> GGGACCTGACCCTC-1     4 0.000
#> GGGATGGATGGTTG-1     4 0.253
#> GGGCAAGATGCATG-1     1 0.000
#> GGGCACACGGTGAG-1     2 0.000
#> GGGCCAACCTTGGA-1     3 0.000
#> GGGCCAACTACGCA-1     1 0.000
#> GGTACTGAACTCTT-1     4 0.000
#> GGTAGTACACTAGC-1     4 0.000
#> GGTAGTACGCCATA-1     1 0.000
#> GGTATCGAGACAAA-1     1 1.000
#> GGTCTAGAGAAACA-1     4 0.000
#> GGTCTAGATAGCGT-1     3 0.000
#> GGTGATACGACTAC-1     4 0.000
#> GGTGGAGATCTCTA-1     1 0.000
#> GTAACGTGACCTCC-1     3 0.000
#> GTAAGCTGGTACCA-1     4 0.000
#> GTAATAACCTTCTA-1     4 0.000
#> GTACCCTGACAGTC-1     2 0.000
#> GTAGACTGAGATGA-1     1 0.249
#> GTAGCAACAGTCGT-1     4 0.000
#> GTAGCAACGGTAGG-1     1 0.000
#> GTAGCATGTAAGCC-1     1 0.000
#> GTAGCTGAAGCTAC-1     2 0.000
#> GTAGGTACACGGGA-1     4 0.000
#> GTAGTGTGAGGCGA-1     1 0.502
#> GTATCACTGGTAGG-1     4 0.249
#> GTCAACGAGTGTAC-1     4 1.000
#> GTCCACTGGGTACT-1     2 0.000
#> GTCCCATGTGGTGT-1     3 0.000
#> GTCGAATGAAGGCG-1     3 0.000
#> GTCTAACTGGTCTA-1     2 0.000
#> GTCTAGGAGCTTCC-1     3 0.249
#> GTGATTCTCTCTCG-1     4 0.000
#> GTGGATTGCACTAG-1     2 0.000
#> GTTAACCTTGCTTT-1     3 0.000
#> GTTAGGTGCCAGTA-1     3 0.249
#> GTTAGGTGCCCAAA-1     2 0.000
#> GTTGAGTGGTCTTT-1     3 0.000
#> GTTGGATGTTTACC-1     2 0.000
#> GTTGTACTATTCCT-1     3 0.000
#> GTTTAAGACCATGA-1     4 0.000
#> TAACACCTTCGCTC-1     3 0.502
#> TAACACCTTCGTAG-1     3 0.000
#> TAACGTCTCAACCA-1     1 1.000
#> TAACTCACGAGGAC-1     1 0.000
#> TAACTCACGTATCG-1     4 0.000
#> TAAGAACTGTGTCA-1     4 1.000
#> TAAGATACGGTTCA-1     1 0.000
#> TAAGCGTGAGGTTC-1     4 0.000
#> TAAGCGTGGACAAA-1     2 0.000
#> TAAGCGTGTGCTCC-1     2 0.000
#> TAAGGCTGTCTCGC-1     3 0.000
#> TAATGTGACTGCAA-1     3 0.000
#> TACAATGAAAACAG-1     4 0.498
#> TACATCACCTGTTT-1     2 0.000
#> TACATCACTGAACC-1     2 0.000
#> TACCATTGCGGGAA-1     1 0.000
#> TACCATTGGGGATG-1     4 1.000
#> TACCATTGTGAGGG-1     4 0.000
#> TACGAGTGATGCTG-1     3 0.000
#> TACGATCTCACTGA-1     2 0.747
#> TACGCCACTCCCAC-1     2 0.000
#> TACGTTACCAAGCT-1     1 0.000
#> TACTAAGATGATGC-1     4 0.000
#> TACTACTGAACCTG-1     4 0.000
#> TACTCAACGGTCTA-1     4 0.000
#> TAGAAACTGCTTCC-1     4 0.000
#> TAGCATCTGCTGTA-1     2 0.000
#> TAGCCGCTTTCCAT-1     3 0.502
#> TAGGCTGATGCCTC-1     4 0.000
#> TAGGTTCTTCTTAC-1     2 0.000
#> TAGGTTCTTGCTGA-1     4 0.249
#> TAGTACCTAAGAAC-1     4 0.000
#> TATAAGACAGCTCA-1     2 0.000
#> TATAAGTGACACCA-1     2 0.000
#> TATAAGTGTATCGG-1     1 0.751
#> TATAAGTGTGGTGT-1     2 0.000
#> TATAGATGTTCCGC-1     2 0.000
#> TATCCAACCAGCTA-1     1 0.751
#> TATCGACTCGATAC-1     2 0.000
#> TATCGTACATTCCT-1     4 0.249
#> TATGAATGTTTGCT-1     2 0.000
#> TATGTCACTAACCG-1     3 0.000
#> TATGTGCTCCGATA-1     4 0.000
#> TATTGCTGAAGAAC-1     1 0.000
#> TATTTCCTATTGGC-1     1 0.502
#> TCAAGGACGGTGTT-1     4 0.000
#> TCAATCACAGTCGT-1     2 0.000
#> TCACAACTTTGCTT-1     1 0.751
#> TCACCCGAGACGGA-1     2 1.000
#> TCACCGTGCTCGCT-1     2 0.000
#> TCACCTCTTCCAAG-1     2 0.000
#> TCAGGATGCCTTTA-1     2 0.000
#> TCAGTTACCTACGA-1     3 0.751
#> TCATCAACTGTTCT-1     3 0.751
#> TCATTCGATACAGC-1     2 0.000
#> TCCACTCTGAGCTT-1     3 0.751
#> TCCCATCTCAAAGA-1     3 0.253
#> TCCCGAACTTCGCC-1     2 0.000
#> TCCCGATGCCTGAA-1     1 0.000
#> TCCGAAGACAATCG-1     1 0.000
#> TCGACCTGCCGATA-1     2 0.000
#> TCGACGCTTCTATC-1     4 0.000
#> TCGATTTGATGCCA-1     4 0.000
#> TCGATTTGCCTACC-1     4 0.000
#> TCTAACACGAGCAG-1     3 0.000
#> TCTAAGCTTCTAGG-1     2 0.000
#> TCTAAGCTTGTTCT-1     4 0.000
#> TCTACAACGACTAC-1     3 0.000
#> TCTAGACTTAGAAG-1     1 0.000
#> TCTAGTTGCACCAA-1     3 0.253
#> TCTATGTGAAGAGT-1     1 0.000
#> TCTTACGAACCTGA-1     4 1.000
#> TCTTCAGAGCTACA-1     3 0.000
#> TGAAATTGGTGAGG-1     3 0.253
#> TGAACCGACTACTT-1     2 0.000
#> TGAACCGATTCGGA-1     2 0.000
#> TGACGATGCAAAGA-1     4 0.000
#> TGACTGGAAGAGAT-1     1 0.000
#> TGACTTACAGTCTG-1     3 0.000
#> TGAGCTGAATGCTG-1     2 0.000
#> TGAGCTGACTGGAT-1     4 0.000
#> TGAGCTGATGCTAG-1     1 0.000
#> TGAGGACTCTCATT-1     4 0.000
#> TGAGGTACGAACCT-1     2 0.000
#> TGATACCTCACTAG-1     4 0.502
#> TGATCGGACTGACA-1     2 0.000
#> TGATCGGATATGCG-1     2 0.000
#> TGCAAGTGGGTAGG-1     4 0.000
#> TGCAATCTTCAGGT-1     3 0.000
#> TGCCAAGAGCAGTT-1     4 0.000
#> TGCCCAACCGCATA-1     2 0.000
#> TGCGATGAGTGCTA-1     1 0.000
#> TGCGCACTCTTGAG-1     1 0.253
#> TGCGTAGAATAAGG-1     1 1.000
#> TGCGTAGATGGTCA-1     2 0.000
#> TGCTATACGGTTCA-1     4 0.000
#> TGGAAAGAGGTCAT-1     2 0.000
#> TGGACCCTACACTG-1     1 0.000
#> TGGACCCTGGTACT-1     2 0.502
#> TGGAGACTATCAGC-1     4 0.498
#> TGGAGGGACGGAGA-1     1 0.498
#> TGGCACCTTCAGTG-1     3 0.000
#> TGGGTATGTTTGGG-1     1 0.000
#> TGGTAGTGCACTGA-1     1 0.000
#> TGGTTACTGACGTT-1     4 0.000
#> TGTAACCTTGCCTC-1     3 0.000
#> TGTACTTGCTCTAT-1     2 0.000
#> TGTAGGTGCTCTAT-1     3 0.000
#> TGTCAGGAGATGAA-1     2 0.000
#> TGTGAGACTGTCAG-1     2 0.000
#> TGTGAGTGAGTGCT-1     2 0.000
#> TGTTAAGACAAAGA-1     1 0.000
#> TGTTAAGATAAGGA-1     1 0.000
#> TGTTACACCGCATA-1     2 0.000
#> TGTTACACGACTAC-1     2 0.502
#> TTACCATGAATCGC-1     1 0.000
#> TTACGACTTGACAC-1     4 0.751
#> TTACTCGAAGAATG-1     3 1.000
#> TTACTCGACGCAAT-1     3 0.000
#> TTAGACCTCCTTTA-1     4 0.249
#> TTAGCTACTGTCCC-1     2 1.000
#> TTAGGGTGTCCTGC-1     3 0.000
#> TTAGGTCTACTTTC-1     1 1.000
#> TTATCCGAGAAAGT-1     3 0.249
#> TTATGGCTTATGGC-1     3 0.000
#> TTATTCCTATGCTG-1     3 1.000
#> TTCAACACCCCAAA-1     4 0.000
#> TTCAACACGGACGA-1     2 0.000
#> TTCAAGCTAAGAAC-1     3 0.000
#> TTCACAACCCGTTC-1     3 0.000
#> TTCACAACGTCTGA-1     1 0.000
#> TTCAGTACTCCTAT-1     1 0.249
#> TTCAGTTGTCCTTA-1     4 0.000
#> TTCATCGAGGTGGA-1     4 0.000
#> TTCATTCTATGTCG-1     1 0.000
#> TTCCAAACCTATGG-1     1 0.000
#> TTCCATGACGAGAG-1     4 0.000
#> TTCCCACTTGTCTT-1     3 1.000
#> TTCCTAGACTAGTG-1     2 0.000
#> TTCGAGGATAGAAG-1     2 0.000
#> TTCGGAGAATGCCA-1     1 0.000
#> TTCGTATGTCCTTA-1     3 0.249
#> TTCTAGTGCATGAC-1     1 0.502
#> TTCTAGTGGTCACA-1     3 0.751
#> TTCTTACTCTGGAT-1     2 0.000
#> TTGAATGAACTACG-1     2 0.000
#> TTGAGGACAGAACA-1     4 0.000
#> TTGAGGACTACGCA-1     3 0.000
#> TTGCATTGCTAAGC-1     4 0.000
#> TTGCTAACACGCTA-1     2 0.000
#> TTGCTATGGTACGT-1     3 0.000
#> TTGCTATGGTAGGG-1     2 0.000
#> TTGGAGACGCTATG-1     4 0.000
#> TTGGTACTACTGGT-1     3 1.000
#> TTTAGCTGGATACC-1     4 0.000
#> TTTAGCTGTACTCT-1     3 0.751
#> TTTAGGCTCCTTTA-1     4 0.249
#> TTTATCCTGTTGTG-1     3 0.751
#> TTTCAGTGTCTATC-1     1 0.000
#> TTTCGAACTCTCAT-1     3 0.249

Heatmaps for the consensus matrix. It visualizes the probability of two samples to be in a same group.

consensus_heatmap(res, k = 2)

plot of chunk tab-node-02-consensus-heatmap-1

consensus_heatmap(res, k = 3)

plot of chunk tab-node-02-consensus-heatmap-2

consensus_heatmap(res, k = 4)

plot of chunk tab-node-02-consensus-heatmap-3

Heatmaps for the membership of samples in all partitions to see how consistent they are:

membership_heatmap(res, k = 2)

plot of chunk tab-node-02-membership-heatmap-1

membership_heatmap(res, k = 3)

plot of chunk tab-node-02-membership-heatmap-2

membership_heatmap(res, k = 4)

plot of chunk tab-node-02-membership-heatmap-3

As soon as the classes for columns are determined, the signatures that are significantly different between subgroups can be looked for. Following are the heatmaps for signatures.

Signature heatmaps where rows are scaled:

get_signatures(res, k = 2)

plot of chunk tab-node-02-get-signatures-1

get_signatures(res, k = 3)

plot of chunk tab-node-02-get-signatures-2

get_signatures(res, k = 4)

plot of chunk tab-node-02-get-signatures-3

Signature heatmaps where rows are not scaled:

get_signatures(res, k = 2, scale_rows = FALSE)

plot of chunk tab-node-02-get-signatures-no-scale-1

get_signatures(res, k = 3, scale_rows = FALSE)

plot of chunk tab-node-02-get-signatures-no-scale-2

get_signatures(res, k = 4, scale_rows = FALSE)

plot of chunk tab-node-02-get-signatures-no-scale-3

Compare the overlap of signatures from different k:

compare_signatures(res)

plot of chunk node-02-signature_compare

get_signature() returns a data frame invisibly. To get the list of signatures, the function call should be assigned to a variable explicitly. In following code, if plot argument is set to FALSE, no heatmap is plotted while only the differential analysis is performed.

# code only for demonstration
tb = get_signature(res, k = ..., plot = FALSE)

An example of the output of tb is:

#>   which_row         fdr    mean_1    mean_2 scaled_mean_1 scaled_mean_2 km
#> 1        38 0.042760348  8.373488  9.131774    -0.5533452     0.5164555  1
#> 2        40 0.018707592  7.106213  8.469186    -0.6173731     0.5762149  1
#> 3        55 0.019134737 10.221463 11.207825    -0.6159697     0.5749050  1
#> 4        59 0.006059896  5.921854  7.869574    -0.6899429     0.6439467  1
#> 5        60 0.018055526  8.928898 10.211722    -0.6204761     0.5791110  1
#> 6        98 0.009384629 15.714769 14.887706     0.6635654    -0.6193277  2
...

The columns in tb are:

  1. which_row: row indices corresponding to the input matrix.
  2. fdr: FDR for the differential test.
  3. mean_x: The mean value in group x.
  4. scaled_mean_x: The mean value in group x after rows are scaled.
  5. km: Row groups if k-means clustering is applied to rows (which is done by automatically selecting number of clusters).

If there are too many signatures, top_signatures = ... can be set to only show the signatures with the highest FDRs:

# code only for demonstration
# e.g. to show the top 500 most significant rows
tb = get_signature(res, k = ..., top_signatures = 500)

If the signatures are defined as these which are uniquely high in current group, diff_method argument can be set to "uniquely_high_in_one_group":

# code only for demonstration
tb = get_signature(res, k = ..., diff_method = "uniquely_high_in_one_group")

UMAP plot which shows how samples are separated.

dimension_reduction(res, k = 2, method = "UMAP")

plot of chunk tab-node-02-dimension-reduction-1

dimension_reduction(res, k = 3, method = "UMAP")

plot of chunk tab-node-02-dimension-reduction-2

dimension_reduction(res, k = 4, method = "UMAP")

plot of chunk tab-node-02-dimension-reduction-3

Following heatmap shows how subgroups are split when increasing k:

collect_classes(res)

plot of chunk node-02-collect-classes

Test correlation between subgroups and known annotations. If the known annotation is numeric, one-way ANOVA test is applied, and if the known annotation is discrete, chi-squared contingency table test is applied.

test_to_known_factors(res)
#>             n_sample Seurat_class(p-value) k
#> ATC:skmeans      524              8.22e-74 2
#> ATC:skmeans      522             7.95e-118 3
#> ATC:skmeans      495             4.51e-107 4

If matrix rows can be associated to genes, consider to use functional_enrichment(res, ...) to perform function enrichment for the signature genes. See this vignette for more detailed explanations.


Node021

Parent node: Node02. Child nodes: Node0211-leaf , Node0212-leaf , Node0221-leaf , Node0222-leaf .

The object with results only for a single top-value method and a single partitioning method can be extracted as:

res = res_rh["021"]

A summary of res and all the functions that can be applied to it:

res
#> A 'ConsensusPartition' object with k = 2, 3, 4.
#>   On a matrix with 3478 rows and 368 columns.
#>   Top rows (236) are extracted by 'ATC' method.
#>   Subgroups are detected by 'skmeans' method.
#>   Performed in total 150 partitions by row resampling.
#>   Best k for subgroups seems to be 2.
#> 
#> Following methods can be applied to this 'ConsensusPartition' object:
#>  [1] "cola_report"             "collect_classes"         "collect_plots"          
#>  [4] "collect_stats"           "colnames"                "compare_partitions"     
#>  [7] "compare_signatures"      "consensus_heatmap"       "dimension_reduction"    
#> [10] "functional_enrichment"   "get_anno_col"            "get_anno"               
#> [13] "get_classes"             "get_consensus"           "get_matrix"             
#> [16] "get_membership"          "get_param"               "get_signatures"         
#> [19] "get_stats"               "is_best_k"               "is_stable_k"            
#> [22] "membership_heatmap"      "ncol"                    "nrow"                   
#> [25] "plot_ecdf"               "predict_classes"         "rownames"               
#> [28] "select_partition_number" "show"                    "suggest_best_k"         
#> [31] "test_to_known_factors"   "top_rows_heatmap"

collect_plots() function collects all the plots made from res for all k (number of subgroups) into one single page to provide an easy and fast comparison between different k.

collect_plots(res)

plot of chunk node-021-collect-plots

The plots are:

All the plots in panels can be made by individual functions and they are plotted later in this section.

select_partition_number() produces several plots showing different statistics for choosing “optimized” k. There are following statistics:

The detailed explanations of these statistics can be found in the cola vignette.

Generally speaking, higher 1-PAC score, higher mean silhouette score or higher concordance corresponds to better partition. Rand index and Jaccard index measure how similar the current partition is compared to partition with k-1. If they are too similar, we won't accept k is better than k-1.

select_partition_number(res)

plot of chunk node-021-select-partition-number

The numeric values for all these statistics can be obtained by get_stats().

get_stats(res)
#>   k 1-PAC mean_silhouette concordance area_increased  Rand Jaccard
#> 2 2 0.881           0.917       0.966          0.494 0.510   0.510
#> 3 3 0.690           0.817       0.913          0.322 0.789   0.608
#> 4 4 0.662           0.733       0.864          0.130 0.838   0.584

suggest_best_k() suggests the best \(k\) based on these statistics. The rules are as follows:

suggest_best_k(res)
#> [1] 2

Following is the table of the partitions (You need to click the show/hide code output link to see it). The membership matrix (columns with name p*) is inferred by clue::cl_consensus() function with the SE method. Basically the value in the membership matrix represents the probability to belong to a certain group. The finall subgroup label for an item is determined with the group with highest probability it belongs to.

In get_classes() function, the entropy is calculated from the membership matrix and the silhouette score is calculated from the consensus matrix.

show/hide code output

cbind(get_classes(res, k = 2), get_membership(res, k = 2))
#>                  class entropy silhouette   p1   p2
#> AAACGCTGTTTCTG-1     1   0.000     0.9741 1.00 0.00
#> AAAGAGACGCGAGA-1     2   0.000     0.9568 0.00 1.00
#> AAAGTTTGTAGCGT-1     2   0.999     0.1084 0.48 0.52
#> AAATGTTGAACGAA-1     2   0.000     0.9568 0.00 1.00
#> AAATTCGAATCACG-1     2   0.000     0.9568 0.00 1.00
#> AACACGTGGAACCT-1     2   0.943     0.4669 0.36 0.64
#> AACAGCACAAGAGT-1     1   0.000     0.9741 1.00 0.00
#> AACCGATGTTCTAC-1     2   0.000     0.9568 0.00 1.00
#> AACTCACTCAAGCT-1     2   0.000     0.9568 0.00 1.00
#> AACTCACTTGGAGG-1     2   0.000     0.9568 0.00 1.00
#> AACTCGGAAGGTCT-1     1   0.000     0.9741 1.00 0.00
#> AACTGTCTCCCTTG-1     2   0.000     0.9568 0.00 1.00
#> AAGACAGATTACCT-1     2   0.760     0.7282 0.22 0.78
#> AAGATTACCCGTTC-1     2   0.722     0.7551 0.20 0.80
#> AAGATTACCGCCTT-1     2   0.000     0.9568 0.00 1.00
#> AAGATTACTCCTCG-1     1   0.000     0.9741 1.00 0.00
#> AAGCCATGACACGT-1     1   0.000     0.9741 1.00 0.00
#> AAGCCTGACCGAAT-1     1   0.000     0.9741 1.00 0.00
#> AAGGTCACGGTTAC-1     1   0.000     0.9741 1.00 0.00
#> AAGTAACTCTGAAC-1     2   0.000     0.9568 0.00 1.00
#> AATCCTTGACGGGA-1     2   0.000     0.9568 0.00 1.00
#> AATGCGTGGACGGA-1     2   0.000     0.9568 0.00 1.00
#> AATGGAGAATCGTG-1     2   0.000     0.9568 0.00 1.00
#> AATGTTGAGTTGAC-1     2   0.000     0.9568 0.00 1.00
#> ACAAATTGCTCAGA-1     1   0.000     0.9741 1.00 0.00
#> ACACGATGATGTGC-1     2   0.000     0.9568 0.00 1.00
#> ACAGCAACACCTAG-1     1   0.000     0.9741 1.00 0.00
#> ACAGTGTGTTGCGA-1     2   0.000     0.9568 0.00 1.00
#> ACATCACTCTACTT-1     2   0.000     0.9568 0.00 1.00
#> ACATTCTGGGAACG-1     2   0.000     0.9568 0.00 1.00
#> ACCAGTGATGACTG-1     1   0.000     0.9741 1.00 0.00
#> ACCCACTGCGCCTT-1     1   0.000     0.9741 1.00 0.00
#> ACCCAGCTGTTAGC-1     2   0.000     0.9568 0.00 1.00
#> ACCCTCGATCAAGC-1     1   0.000     0.9741 1.00 0.00
#> ACCTGAGATATCGG-1     1   0.000     0.9741 1.00 0.00
#> ACGATCGAGTCACA-1     2   0.000     0.9568 0.00 1.00
#> ACGCCACTGAACTC-1     1   0.000     0.9741 1.00 0.00
#> ACGCCGGAAACCAC-1     2   0.000     0.9568 0.00 1.00
#> ACGGAGGACTCTTA-1     2   0.141     0.9423 0.02 0.98
#> ACGGTATGAGTCGT-1     2   0.981     0.3080 0.42 0.58
#> ACGTCAGAGAGCTT-1     1   0.242     0.9395 0.96 0.04
#> ACGTCCTGATAAGG-1     2   0.000     0.9568 0.00 1.00
#> ACGTCGCTCTATTC-1     2   0.000     0.9568 0.00 1.00
#> ACGTTGGACCGTAA-1     1   0.000     0.9741 1.00 0.00
#> ACTAAAACTCGACA-1     2   0.000     0.9568 0.00 1.00
#> ACTCAGGATTCGTT-1     1   0.000     0.9741 1.00 0.00
#> ACTCGCACGAAAGT-1     2   0.000     0.9568 0.00 1.00
#> ACTCGCACTACGAC-1     2   0.000     0.9568 0.00 1.00
#> ACTGTTACCCACAA-1     1   0.000     0.9741 1.00 0.00
#> ACTTAAGATTACTC-1     2   0.000     0.9568 0.00 1.00
#> ACTTGGGAGAAAGT-1     2   0.000     0.9568 0.00 1.00
#> ACTTGGGATGTGAC-1     1   0.000     0.9741 1.00 0.00
#> AGAAAGTGGGGATG-1     2   0.141     0.9423 0.02 0.98
#> AGACACTGTCAAGC-1     2   0.000     0.9568 0.00 1.00
#> AGACCTGAAGTAGA-1     2   0.000     0.9568 0.00 1.00
#> AGACGTACCTCTTA-1     2   0.000     0.9568 0.00 1.00
#> AGAGATGAGGTTTG-1     1   0.529     0.8538 0.88 0.12
#> AGATCGTGTCTGGA-1     2   0.000     0.9568 0.00 1.00
#> AGATTCCTCACTTT-1     2   0.000     0.9568 0.00 1.00
#> AGATTCCTGACGAG-1     2   0.000     0.9568 0.00 1.00
#> AGCATCGAGCTTCC-1     2   0.000     0.9568 0.00 1.00
#> AGCTGCCTTGGGAG-1     1   0.000     0.9741 1.00 0.00
#> AGGGCGCTAACCAC-1     2   0.529     0.8514 0.12 0.88
#> AGGGTGGACTCAAG-1     2   0.402     0.8916 0.08 0.92
#> AGGGTTTGTTCATC-1     1   0.000     0.9741 1.00 0.00
#> AGGTTCGAACCTCC-1     1   0.000     0.9741 1.00 0.00
#> AGGTTCGAACGTAC-1     1   0.000     0.9741 1.00 0.00
#> AGTCTACTAGGGTG-1     1   0.000     0.9741 1.00 0.00
#> AGTGTTCTCACTTT-1     2   0.000     0.9568 0.00 1.00
#> AGTTATGAACAGTC-1     2   0.000     0.9568 0.00 1.00
#> AGTTCTACCAGCTA-1     1   0.141     0.9575 0.98 0.02
#> ATAACAACATGCTG-1     2   0.141     0.9423 0.02 0.98
#> ATAAGTTGGTACGT-1     1   0.000     0.9741 1.00 0.00
#> ATAATGACTCGTGA-1     1   0.000     0.9741 1.00 0.00
#> ATACCACTCGTACA-1     2   0.000     0.9568 0.00 1.00
#> ATACCGGACATTTC-1     2   0.000     0.9568 0.00 1.00
#> ATACCGGAGGTGTT-1     2   0.000     0.9568 0.00 1.00
#> ATACGGACAGACTC-1     1   0.000     0.9741 1.00 0.00
#> ATACGGACCTACTT-1     1   0.000     0.9741 1.00 0.00
#> ATACGGACTCTGGA-1     1   0.000     0.9741 1.00 0.00
#> ATACGTCTTAACGC-1     1   0.904     0.5200 0.68 0.32
#> ATAGCGTGCCCTTG-1     2   0.000     0.9568 0.00 1.00
#> ATAGCGTGGTATCG-1     1   0.000     0.9741 1.00 0.00
#> ATAGTCCTAGTGTC-1     2   0.000     0.9568 0.00 1.00
#> ATATAGTGGAATGA-1     1   0.000     0.9741 1.00 0.00
#> ATATGCCTAGATCC-1     1   0.327     0.9208 0.94 0.06
#> ATCAAATGAGCCTA-1     2   0.000     0.9568 0.00 1.00
#> ATCCATACTCCTTA-1     2   0.141     0.9422 0.02 0.98
#> ATCGCGCTCAGAGG-1     2   0.327     0.9100 0.06 0.94
#> ATCGTTTGGGTACT-1     1   0.402     0.8994 0.92 0.08
#> ATCGTTTGTGCCAA-1     1   0.000     0.9741 1.00 0.00
#> ATCTACACCCGCTT-1     1   0.000     0.9741 1.00 0.00
#> ATCTCAACCTTGTT-1     2   0.000     0.9568 0.00 1.00
#> ATCTTGACCTCCCA-1     1   0.000     0.9741 1.00 0.00
#> ATGCCAGACAGTCA-1     1   0.000     0.9741 1.00 0.00
#> ATGTAAACTTCACT-1     2   0.000     0.9568 0.00 1.00
#> ATGTACCTTTATCC-1     1   0.000     0.9741 1.00 0.00
#> ATGTCACTAATGCC-1     2   0.000     0.9568 0.00 1.00
#> ATGTTCACAGTCTG-1     2   0.722     0.7550 0.20 0.80
#> ATTACCTGCCTTAT-1     2   0.000     0.9568 0.00 1.00
#> ATTCCAACCATTGG-1     2   0.000     0.9568 0.00 1.00
#> ATTCGACTGAATAG-1     2   0.000     0.9568 0.00 1.00
#> ATTCGGGAAAGGCG-1     2   0.000     0.9568 0.00 1.00
#> ATTGCACTGGAGCA-1     1   0.000     0.9741 1.00 0.00
#> ATTTGCACAAGATG-1     1   0.000     0.9741 1.00 0.00
#> CAAAGCTGTTGCTT-1     2   0.000     0.9568 0.00 1.00
#> CAAATTGATGGAGG-1     1   0.000     0.9741 1.00 0.00
#> CAACCAGATAGAAG-1     1   0.000     0.9741 1.00 0.00
#> CAACGTGATCAAGC-1     2   0.999     0.1074 0.48 0.52
#> CAAGTCGATAGCGT-1     2   0.971     0.3687 0.40 0.60
#> CAATAAACGCCATA-1     1   0.000     0.9741 1.00 0.00
#> CAATAATGAACTGC-1     2   0.141     0.9423 0.02 0.98
#> CACAGATGGTTTCT-1     2   0.000     0.9568 0.00 1.00
#> CACAGTGATGAAGA-1     2   0.000     0.9568 0.00 1.00
#> CACTGAGACAGTCA-1     1   0.000     0.9741 1.00 0.00
#> CAGCAATGTCTACT-1     2   0.000     0.9568 0.00 1.00
#> CAGCAATGTGAGGG-1     1   0.000     0.9741 1.00 0.00
#> CAGCATGACAACCA-1     2   0.000     0.9568 0.00 1.00
#> CAGCCTTGCTACCC-1     2   0.000     0.9568 0.00 1.00
#> CAGCTAGATGTGAC-1     1   0.000     0.9741 1.00 0.00
#> CAGGAACTCTCAGA-1     1   0.000     0.9741 1.00 0.00
#> CAGGTAACAGACTC-1     2   0.881     0.5926 0.30 0.70
#> CATAAAACGGAGCA-1     2   0.000     0.9568 0.00 1.00
#> CATACTACGTACCA-1     1   0.327     0.9199 0.94 0.06
#> CATATAGACTAAGC-1     2   0.000     0.9568 0.00 1.00
#> CATCAGGATTTCGT-1     1   0.000     0.9741 1.00 0.00
#> CATGCGCTCAGATC-1     1   0.242     0.9394 0.96 0.04
#> CATGGCCTAGGGTG-1     1   0.000     0.9741 1.00 0.00
#> CATGTTTGGGGATG-1     2   0.000     0.9568 0.00 1.00
#> CATTAGCTCCACAA-1     2   0.000     0.9568 0.00 1.00
#> CATTGACTAGCGGA-1     2   0.000     0.9568 0.00 1.00
#> CCAAAGTGTGAGAA-1     1   0.000     0.9741 1.00 0.00
#> CCAACCTGACGTAC-1     2   0.000     0.9568 0.00 1.00
#> CCAACCTGTTCGCC-1     2   0.000     0.9568 0.00 1.00
#> CCAATTTGAACGTC-1     2   0.000     0.9568 0.00 1.00
#> CCACTGACCCGCTT-1     2   0.000     0.9568 0.00 1.00
#> CCACTGTGGGAAGC-1     1   0.000     0.9741 1.00 0.00
#> CCAGCGGAAAGGCG-1     1   0.141     0.9575 0.98 0.02
#> CCAGCGGACGACTA-1     2   0.000     0.9568 0.00 1.00
#> CCAGGTCTAGCATC-1     1   0.000     0.9741 1.00 0.00
#> CCAGTCACACTGGT-1     2   0.000     0.9568 0.00 1.00
#> CCATCCGATTCGCC-1     1   0.000     0.9741 1.00 0.00
#> CCCAACTGCAATCG-1     1   0.000     0.9741 1.00 0.00
#> CCCGGAGAAGGGTG-1     1   0.000     0.9741 1.00 0.00
#> CCCTACGAATTGGC-1     1   0.000     0.9741 1.00 0.00
#> CCGCGAGACACACA-1     2   0.141     0.9423 0.02 0.98
#> CCGCTATGTGCACA-1     2   0.000     0.9568 0.00 1.00
#> CCTAAGGACTAGCA-1     1   0.000     0.9741 1.00 0.00
#> CCTATAACGAGACG-1     1   0.000     0.9741 1.00 0.00
#> CCTCTACTCTTCGC-1     2   0.000     0.9568 0.00 1.00
#> CCTGCAACACGTTG-1     2   0.000     0.9568 0.00 1.00
#> CCTTCACTGGAGTG-1     1   0.402     0.8992 0.92 0.08
#> CCTTTAGATTCATC-1     2   0.000     0.9568 0.00 1.00
#> CGAACATGCCCTAC-1     2   0.529     0.8522 0.12 0.88
#> CGAATCGAGGAGCA-1     1   0.000     0.9741 1.00 0.00
#> CGACTGCTTCCTCG-1     2   0.981     0.3110 0.42 0.58
#> CGAGAACTTGTTCT-1     2   0.000     0.9568 0.00 1.00
#> CGAGCGTGTATGCG-1     1   0.000     0.9741 1.00 0.00
#> CGAGGCTGGCAGTT-1     2   0.327     0.9095 0.06 0.94
#> CGATAGACCCGTAA-1     1   0.000     0.9741 1.00 0.00
#> CGATAGACGTAGGG-1     1   0.000     0.9741 1.00 0.00
#> CGCACTTGTCACGA-1     2   0.000     0.9568 0.00 1.00
#> CGCATAGATCACGA-1     1   0.000     0.9741 1.00 0.00
#> CGCGATCTCAGTCA-1     2   0.000     0.9568 0.00 1.00
#> CGCGATCTGTTGAC-1     2   0.000     0.9568 0.00 1.00
#> CGCTCATGCATTTC-1     1   0.000     0.9741 1.00 0.00
#> CGGATAACAACGAA-1     2   0.000     0.9568 0.00 1.00
#> CGGATAACTCAGTG-1     1   0.000     0.9741 1.00 0.00
#> CGGCATCTTCGTAG-1     2   0.000     0.9568 0.00 1.00
#> CGTAGCCTCTCTCG-1     2   0.000     0.9568 0.00 1.00
#> CGTCAAGAAAGGTA-1     1   0.000     0.9741 1.00 0.00
#> CGTGTAGAGTTCAG-1     1   0.855     0.6083 0.72 0.28
#> CTAAGGACGCCATA-1     2   0.000     0.9568 0.00 1.00
#> CTAATGCTTGTGGT-1     2   0.943     0.4671 0.36 0.64
#> CTACTATGAACCAC-1     2   0.000     0.9568 0.00 1.00
#> CTACTATGATGTGC-1     1   0.000     0.9741 1.00 0.00
#> CTACTCCTGCCATA-1     1   0.000     0.9741 1.00 0.00
#> CTATACTGAGGTTC-1     1   0.000     0.9741 1.00 0.00
#> CTATACTGCGCTAA-1     1   0.971     0.3195 0.60 0.40
#> CTATAGCTTCGCTC-1     2   0.000     0.9568 0.00 1.00
#> CTATAGCTTGCCTC-1     2   0.000     0.9568 0.00 1.00
#> CTATCCCTCCACCT-1     2   0.000     0.9568 0.00 1.00
#> CTATTGACAAACGA-1     1   0.000     0.9741 1.00 0.00
#> CTCAATTGGTTGCA-1     2   0.000     0.9568 0.00 1.00
#> CTCAGCACTGAACC-1     1   0.000     0.9741 1.00 0.00
#> CTCAGCTGAACCTG-1     2   0.000     0.9568 0.00 1.00
#> CTCCTACTGCCTTC-1     1   0.000     0.9741 1.00 0.00
#> CTCGAAGATTAGGC-1     2   0.000     0.9568 0.00 1.00
#> CTCTAATGTCCAAG-1     2   0.000     0.9568 0.00 1.00
#> CTGCCAACTAACCG-1     2   0.904     0.5538 0.32 0.68
#> CTGGCACTCAAGCT-1     2   0.000     0.9568 0.00 1.00
#> CTGTGAGACGAACT-1     2   0.795     0.6956 0.24 0.76
#> CTGTGAGACTGTAG-1     2   0.000     0.9568 0.00 1.00
#> CTTACAACTCCCGT-1     1   0.141     0.9575 0.98 0.02
#> CTTGATTGATCTTC-1     2   0.990     0.2455 0.44 0.56
#> GAAAGATGCTTCGC-1     2   0.000     0.9568 0.00 1.00
#> GAAAGTGACCACAA-1     2   0.000     0.9568 0.00 1.00
#> GAAATACTACCAAC-1     1   0.000     0.9741 1.00 0.00
#> GAACTGTGCCAGTA-1     2   0.000     0.9568 0.00 1.00
#> GAAGGGTGCTTAGG-1     2   0.000     0.9568 0.00 1.00
#> GAAGTCACCCTCGT-1     1   0.795     0.6798 0.76 0.24
#> GACCAAACGACTAC-1     1   0.680     0.7736 0.82 0.18
#> GACCAAACGTATCG-1     2   0.402     0.8922 0.08 0.92
#> GACGTCCTCTCAAG-1     2   0.000     0.9568 0.00 1.00
#> GACTCCTGTTGGTG-1     2   0.000     0.9568 0.00 1.00
#> GACTGAACCAATCG-1     2   0.000     0.9568 0.00 1.00
#> GAGCGCACGCGTAT-1     1   0.242     0.9398 0.96 0.04
#> GAGCGCTGTCTTAC-1     1   0.990     0.1890 0.56 0.44
#> GAGGTACTACTCAG-1     2   0.469     0.8722 0.10 0.90
#> GAGGTTTGTAAGCC-1     1   0.000     0.9741 1.00 0.00
#> GAGTTGTGCATGGT-1     1   0.000     0.9741 1.00 0.00
#> GAGTTGTGGCGAGA-1     1   0.795     0.6792 0.76 0.24
#> GATAAGGAGAAACA-1     1   0.000     0.9741 1.00 0.00
#> GATAAGGATTCACT-1     2   0.000     0.9568 0.00 1.00
#> GATACTCTTGACTG-1     2   0.000     0.9568 0.00 1.00
#> GATAGAGATCACGA-1     2   0.000     0.9568 0.00 1.00
#> GATATATGTGGAGG-1     2   0.000     0.9568 0.00 1.00
#> GATATCCTCCCGTT-1     1   0.000     0.9741 1.00 0.00
#> GATCCGCTGGTCAT-1     2   0.000     0.9568 0.00 1.00
#> GATCGATGTAAGGA-1     2   0.000     0.9568 0.00 1.00
#> GATCTTACGAATAG-1     1   0.000     0.9741 1.00 0.00
#> GATCTTACGAGATA-1     2   0.000     0.9568 0.00 1.00
#> GATGCCCTGGCAAG-1     2   0.000     0.9568 0.00 1.00
#> GATTTAGATTCGTT-1     1   0.000     0.9741 1.00 0.00
#> GATTTGCTAACGGG-1     1   0.000     0.9741 1.00 0.00
#> GCAACCCTCCTCGT-1     1   0.000     0.9741 1.00 0.00
#> GCAATCGATCCTTA-1     2   0.000     0.9568 0.00 1.00
#> GCACAATGGTGCAT-1     2   0.000     0.9568 0.00 1.00
#> GCACCACTCATGAC-1     2   0.000     0.9568 0.00 1.00
#> GCACCACTGTTTGG-1     1   0.000     0.9741 1.00 0.00
#> GCACCACTTTCGGA-1     2   0.000     0.9568 0.00 1.00
#> GCCACGGAGGCGAA-1     1   0.000     0.9741 1.00 0.00
#> GCCGTACTGGCAAG-1     1   0.000     0.9741 1.00 0.00
#> GCCTGACTCTCAAG-1     2   0.000     0.9568 0.00 1.00
#> GCGAGCACTTGCTT-1     2   0.000     0.9568 0.00 1.00
#> GCGCACGACTTTAC-1     2   0.000     0.9568 0.00 1.00
#> GCGGCAACTGTCGA-1     1   0.000     0.9741 1.00 0.00
#> GCTACCTGAGAAGT-1     2   0.000     0.9568 0.00 1.00
#> GCTAGATGAGCTCA-1     2   0.000     0.9568 0.00 1.00
#> GCTCGACTCTAGTG-1     1   0.000     0.9741 1.00 0.00
#> GCTGATGAGGTATC-1     2   0.000     0.9568 0.00 1.00
#> GCTTAACTACAGTC-1     1   0.000     0.9741 1.00 0.00
#> GCTTAACTTAGACC-1     1   0.000     0.9741 1.00 0.00
#> GGAACACTCACTTT-1     1   0.000     0.9741 1.00 0.00
#> GGAACTTGCTCCAC-1     2   0.000     0.9568 0.00 1.00
#> GGAAGGACATCGGT-1     2   0.000     0.9568 0.00 1.00
#> GGAATCTGCTTGTT-1     2   0.000     0.9568 0.00 1.00
#> GGACCGTGCTTACT-1     2   0.958     0.4160 0.38 0.62
#> GGACCTCTGTAAGA-1     1   0.000     0.9741 1.00 0.00
#> GGACGAGAGTGTCA-1     1   0.000     0.9741 1.00 0.00
#> GGAGGATGGTTGAC-1     1   0.000     0.9741 1.00 0.00
#> GGAGGATGTCAGTG-1     1   0.000     0.9741 1.00 0.00
#> GGATGTACGTCTTT-1     1   0.000     0.9741 1.00 0.00
#> GGCAAGGACTTGGA-1     2   0.000     0.9568 0.00 1.00
#> GGCCCAGAAAGTAG-1     2   0.000     0.9568 0.00 1.00
#> GGCTCACTACTCAG-1     2   0.000     0.9568 0.00 1.00
#> GGGAACGAGTGTCA-1     1   0.000     0.9741 1.00 0.00
#> GGGAAGTGTTGAGC-1     1   0.000     0.9741 1.00 0.00
#> GGGACCTGACCCTC-1     2   0.000     0.9568 0.00 1.00
#> GGGATGGATGGTTG-1     2   0.141     0.9423 0.02 0.98
#> GGGCAAGATGCATG-1     1   0.000     0.9741 1.00 0.00
#> GGGCCAACTACGCA-1     1   0.000     0.9741 1.00 0.00
#> GGTACTGAACTCTT-1     2   0.469     0.8713 0.10 0.90
#> GGTAGTACACTAGC-1     1   0.995     0.1201 0.54 0.46
#> GGTAGTACGCCATA-1     1   0.000     0.9741 1.00 0.00
#> GGTATCGAGACAAA-1     1   0.000     0.9741 1.00 0.00
#> GGTCTAGAGAAACA-1     2   0.141     0.9423 0.02 0.98
#> GGTGATACGACTAC-1     2   0.000     0.9568 0.00 1.00
#> GGTGGAGATCTCTA-1     1   0.000     0.9741 1.00 0.00
#> GTAAGCTGGTACCA-1     2   0.760     0.7270 0.22 0.78
#> GTAATAACCTTCTA-1     2   0.795     0.6961 0.24 0.76
#> GTAGACTGAGATGA-1     1   0.000     0.9741 1.00 0.00
#> GTAGCAACAGTCGT-1     2   0.000     0.9568 0.00 1.00
#> GTAGCAACGGTAGG-1     1   0.000     0.9741 1.00 0.00
#> GTAGCATGTAAGCC-1     1   0.000     0.9741 1.00 0.00
#> GTAGGTACACGGGA-1     2   0.000     0.9568 0.00 1.00
#> GTAGTGTGAGGCGA-1     1   0.000     0.9741 1.00 0.00
#> GTATCACTGGTAGG-1     2   0.000     0.9568 0.00 1.00
#> GTCAACGAGTGTAC-1     2   0.680     0.7814 0.18 0.82
#> GTCTAGGAGCTTCC-1     2   0.000     0.9568 0.00 1.00
#> GTGATTCTCTCTCG-1     2   0.000     0.9568 0.00 1.00
#> GTTTAAGACCATGA-1     2   0.000     0.9568 0.00 1.00
#> TAACACCTTCGCTC-1     2   0.000     0.9568 0.00 1.00
#> TAACGTCTCAACCA-1     1   0.999     0.0402 0.52 0.48
#> TAACTCACGAGGAC-1     1   0.000     0.9741 1.00 0.00
#> TAACTCACGTATCG-1     2   0.000     0.9568 0.00 1.00
#> TAAGAACTGTGTCA-1     2   0.760     0.7266 0.22 0.78
#> TAAGATACGGTTCA-1     1   0.000     0.9741 1.00 0.00
#> TAAGCGTGAGGTTC-1     2   0.000     0.9568 0.00 1.00
#> TACAATGAAAACAG-1     2   0.141     0.9423 0.02 0.98
#> TACCATTGCGGGAA-1     1   0.000     0.9741 1.00 0.00
#> TACCATTGGGGATG-1     1   0.000     0.9741 1.00 0.00
#> TACCATTGTGAGGG-1     2   0.000     0.9568 0.00 1.00
#> TACGTTACCAAGCT-1     1   0.000     0.9741 1.00 0.00
#> TACTAAGATGATGC-1     2   0.981     0.3068 0.42 0.58
#> TACTACTGAACCTG-1     2   0.000     0.9568 0.00 1.00
#> TACTCAACGGTCTA-1     2   0.000     0.9568 0.00 1.00
#> TAGAAACTGCTTCC-1     2   0.000     0.9568 0.00 1.00
#> TAGGCTGATGCCTC-1     2   0.000     0.9568 0.00 1.00
#> TAGGTTCTTGCTGA-1     2   0.000     0.9568 0.00 1.00
#> TAGTACCTAAGAAC-1     2   0.000     0.9568 0.00 1.00
#> TATAAGTGTATCGG-1     1   0.000     0.9741 1.00 0.00
#> TATCCAACCAGCTA-1     1   0.000     0.9741 1.00 0.00
#> TATCGTACATTCCT-1     2   0.000     0.9568 0.00 1.00
#> TATGTGCTCCGATA-1     2   0.000     0.9568 0.00 1.00
#> TATTGCTGAAGAAC-1     1   0.000     0.9741 1.00 0.00
#> TATTTCCTATTGGC-1     1   0.000     0.9741 1.00 0.00
#> TCAAGGACGGTGTT-1     2   0.000     0.9568 0.00 1.00
#> TCACAACTTTGCTT-1     1   0.000     0.9741 1.00 0.00
#> TCAGTTACCTACGA-1     2   0.000     0.9568 0.00 1.00
#> TCCACTCTGAGCTT-1     2   0.000     0.9568 0.00 1.00
#> TCCCATCTCAAAGA-1     2   0.000     0.9568 0.00 1.00
#> TCCCGATGCCTGAA-1     1   0.000     0.9741 1.00 0.00
#> TCCGAAGACAATCG-1     1   0.000     0.9741 1.00 0.00
#> TCGACGCTTCTATC-1     2   0.000     0.9568 0.00 1.00
#> TCGATTTGATGCCA-1     2   0.000     0.9568 0.00 1.00
#> TCGATTTGCCTACC-1     2   0.000     0.9568 0.00 1.00
#> TCTAAGCTTGTTCT-1     2   0.000     0.9568 0.00 1.00
#> TCTAGACTTAGAAG-1     1   0.000     0.9741 1.00 0.00
#> TCTATGTGAAGAGT-1     1   0.000     0.9741 1.00 0.00
#> TCTTACGAACCTGA-1     2   0.141     0.9423 0.02 0.98
#> TGAAATTGGTGAGG-1     2   0.000     0.9568 0.00 1.00
#> TGACGATGCAAAGA-1     2   0.000     0.9568 0.00 1.00
#> TGACTGGAAGAGAT-1     1   0.000     0.9741 1.00 0.00
#> TGAGCTGACTGGAT-1     2   0.000     0.9568 0.00 1.00
#> TGAGCTGATGCTAG-1     1   0.000     0.9741 1.00 0.00
#> TGAGGACTCTCATT-1     2   0.000     0.9568 0.00 1.00
#> TGATACCTCACTAG-1     2   0.995     0.1779 0.46 0.54
#> TGCAAGTGGGTAGG-1     2   0.242     0.9269 0.04 0.96
#> TGCCAAGAGCAGTT-1     2   0.469     0.8719 0.10 0.90
#> TGCGATGAGTGCTA-1     1   0.000     0.9741 1.00 0.00
#> TGCGCACTCTTGAG-1     1   0.000     0.9741 1.00 0.00
#> TGCGTAGAATAAGG-1     1   0.000     0.9741 1.00 0.00
#> TGCTATACGGTTCA-1     2   0.000     0.9568 0.00 1.00
#> TGGACCCTACACTG-1     1   0.000     0.9741 1.00 0.00
#> TGGAGACTATCAGC-1     2   0.000     0.9568 0.00 1.00
#> TGGAGGGACGGAGA-1     1   0.000     0.9741 1.00 0.00
#> TGGGTATGTTTGGG-1     1   0.141     0.9575 0.98 0.02
#> TGGTAGTGCACTGA-1     1   0.000     0.9741 1.00 0.00
#> TGGTTACTGACGTT-1     2   0.000     0.9568 0.00 1.00
#> TGTTAAGACAAAGA-1     1   0.000     0.9741 1.00 0.00
#> TGTTAAGATAAGGA-1     1   0.242     0.9399 0.96 0.04
#> TGTTACACGACTAC-1     1   0.000     0.9741 1.00 0.00
#> TTACCATGAATCGC-1     1   0.000     0.9741 1.00 0.00
#> TTACGACTTGACAC-1     2   0.000     0.9568 0.00 1.00
#> TTACTCGAAGAATG-1     2   0.000     0.9568 0.00 1.00
#> TTAGACCTCCTTTA-1     2   0.943     0.4685 0.36 0.64
#> TTAGGTCTACTTTC-1     1   0.000     0.9741 1.00 0.00
#> TTCAACACCCCAAA-1     2   0.680     0.7819 0.18 0.82
#> TTCAAGCTAAGAAC-1     2   0.000     0.9568 0.00 1.00
#> TTCACAACGTCTGA-1     1   0.000     0.9741 1.00 0.00
#> TTCAGTACTCCTAT-1     1   0.469     0.8770 0.90 0.10
#> TTCAGTTGTCCTTA-1     2   0.000     0.9568 0.00 1.00
#> TTCATCGAGGTGGA-1     2   0.000     0.9568 0.00 1.00
#> TTCATTCTATGTCG-1     2   0.855     0.6289 0.28 0.72
#> TTCCAAACCTATGG-1     1   0.000     0.9741 1.00 0.00
#> TTCCATGACGAGAG-1     2   0.000     0.9568 0.00 1.00
#> TTCCCACTTGTCTT-1     2   0.000     0.9568 0.00 1.00
#> TTCGGAGAATGCCA-1     1   0.000     0.9741 1.00 0.00
#> TTCTAGTGCATGAC-1     2   0.000     0.9568 0.00 1.00
#> TTGAGGACAGAACA-1     2   0.000     0.9568 0.00 1.00
#> TTGCATTGCTAAGC-1     2   0.000     0.9568 0.00 1.00
#> TTGGAGACGCTATG-1     2   0.000     0.9568 0.00 1.00
#> TTTAGCTGGATACC-1     2   0.000     0.9568 0.00 1.00
#> TTTAGCTGTACTCT-1     2   0.000     0.9568 0.00 1.00
#> TTTAGGCTCCTTTA-1     1   0.242     0.9397 0.96 0.04
#> TTTCAGTGTCTATC-1     1   0.000     0.9741 1.00 0.00
#> TTTCGAACTCTCAT-1     2   0.000     0.9568 0.00 1.00

show/hide code output

cbind(get_classes(res, k = 3), get_membership(res, k = 3))
#>                  class entropy silhouette   p1   p2   p3
#> AAACGCTGTTTCTG-1     1  0.0000     0.9388 1.00 0.00 0.00
#> AAAGAGACGCGAGA-1     2  0.2959     0.8654 0.00 0.90 0.10
#> AAAGTTTGTAGCGT-1     3  0.6793     0.7244 0.16 0.10 0.74
#> AAATGTTGAACGAA-1     2  0.2066     0.8801 0.00 0.94 0.06
#> AAATTCGAATCACG-1     2  0.0000     0.8895 0.00 1.00 0.00
#> AACACGTGGAACCT-1     3  0.0000     0.8762 0.00 0.00 1.00
#> AACAGCACAAGAGT-1     1  0.0000     0.9388 1.00 0.00 0.00
#> AACCGATGTTCTAC-1     2  0.0000     0.8895 0.00 1.00 0.00
#> AACTCACTCAAGCT-1     2  0.5835     0.5940 0.00 0.66 0.34
#> AACTCACTTGGAGG-1     2  0.0000     0.8895 0.00 1.00 0.00
#> AACTCGGAAGGTCT-1     1  0.0000     0.9388 1.00 0.00 0.00
#> AACTGTCTCCCTTG-1     2  0.0000     0.8895 0.00 1.00 0.00
#> AAGACAGATTACCT-1     3  0.0000     0.8762 0.00 0.00 1.00
#> AAGATTACCCGTTC-1     3  0.0892     0.8713 0.00 0.02 0.98
#> AAGATTACCGCCTT-1     2  0.1529     0.8850 0.00 0.96 0.04
#> AAGATTACTCCTCG-1     1  0.0000     0.9388 1.00 0.00 0.00
#> AAGCCATGACACGT-1     1  0.3686     0.8107 0.86 0.00 0.14
#> AAGCCTGACCGAAT-1     1  0.0000     0.9388 1.00 0.00 0.00
#> AAGGTCACGGTTAC-1     1  0.0000     0.9388 1.00 0.00 0.00
#> AAGTAACTCTGAAC-1     2  0.1529     0.8857 0.00 0.96 0.04
#> AATCCTTGACGGGA-1     2  0.0000     0.8895 0.00 1.00 0.00
#> AATGCGTGGACGGA-1     2  0.0000     0.8895 0.00 1.00 0.00
#> AATGGAGAATCGTG-1     2  0.5706     0.6262 0.00 0.68 0.32
#> AATGTTGAGTTGAC-1     3  0.0000     0.8762 0.00 0.00 1.00
#> ACAAATTGCTCAGA-1     1  0.0000     0.9388 1.00 0.00 0.00
#> ACACGATGATGTGC-1     2  0.5216     0.7206 0.00 0.74 0.26
#> ACAGCAACACCTAG-1     1  0.0000     0.9388 1.00 0.00 0.00
#> ACAGTGTGTTGCGA-1     3  0.0000     0.8762 0.00 0.00 1.00
#> ACATCACTCTACTT-1     3  0.2537     0.8370 0.00 0.08 0.92
#> ACATTCTGGGAACG-1     2  0.0000     0.8895 0.00 1.00 0.00
#> ACCAGTGATGACTG-1     1  0.0000     0.9388 1.00 0.00 0.00
#> ACCCACTGCGCCTT-1     1  0.0000     0.9388 1.00 0.00 0.00
#> ACCCAGCTGTTAGC-1     2  0.1529     0.8850 0.00 0.96 0.04
#> ACCCTCGATCAAGC-1     1  0.0000     0.9388 1.00 0.00 0.00
#> ACCTGAGATATCGG-1     1  0.0000     0.9388 1.00 0.00 0.00
#> ACGATCGAGTCACA-1     2  0.3686     0.8431 0.00 0.86 0.14
#> ACGCCACTGAACTC-1     1  0.0000     0.9388 1.00 0.00 0.00
#> ACGCCGGAAACCAC-1     2  0.0000     0.8895 0.00 1.00 0.00
#> ACGGAGGACTCTTA-1     3  0.0000     0.8762 0.00 0.00 1.00
#> ACGGTATGAGTCGT-1     2  0.6053     0.6007 0.26 0.72 0.02
#> ACGTCAGAGAGCTT-1     1  0.6192     0.2797 0.58 0.00 0.42
#> ACGTCCTGATAAGG-1     2  0.0000     0.8895 0.00 1.00 0.00
#> ACGTCGCTCTATTC-1     2  0.0000     0.8895 0.00 1.00 0.00
#> ACGTTGGACCGTAA-1     1  0.2947     0.8764 0.92 0.02 0.06
#> ACTAAAACTCGACA-1     2  0.4002     0.7961 0.00 0.84 0.16
#> ACTCAGGATTCGTT-1     1  0.0000     0.9388 1.00 0.00 0.00
#> ACTCGCACGAAAGT-1     3  0.0000     0.8762 0.00 0.00 1.00
#> ACTCGCACTACGAC-1     2  0.2537     0.8750 0.00 0.92 0.08
#> ACTGTTACCCACAA-1     1  0.0000     0.9388 1.00 0.00 0.00
#> ACTTAAGATTACTC-1     2  0.0000     0.8895 0.00 1.00 0.00
#> ACTTGGGAGAAAGT-1     2  0.4002     0.8269 0.00 0.84 0.16
#> ACTTGGGATGTGAC-1     1  0.0000     0.9388 1.00 0.00 0.00
#> AGAAAGTGGGGATG-1     2  0.0892     0.8822 0.02 0.98 0.00
#> AGACACTGTCAAGC-1     3  0.2066     0.8513 0.00 0.06 0.94
#> AGACCTGAAGTAGA-1     2  0.5397     0.6950 0.00 0.72 0.28
#> AGACGTACCTCTTA-1     2  0.0000     0.8895 0.00 1.00 0.00
#> AGAGATGAGGTTTG-1     3  0.2959     0.8331 0.10 0.00 0.90
#> AGATCGTGTCTGGA-1     2  0.4555     0.7912 0.00 0.80 0.20
#> AGATTCCTCACTTT-1     2  0.0000     0.8895 0.00 1.00 0.00
#> AGATTCCTGACGAG-1     2  0.6126     0.4668 0.00 0.60 0.40
#> AGCATCGAGCTTCC-1     3  0.0000     0.8762 0.00 0.00 1.00
#> AGCTGCCTTGGGAG-1     1  0.0000     0.9388 1.00 0.00 0.00
#> AGGGCGCTAACCAC-1     2  0.0892     0.8820 0.02 0.98 0.00
#> AGGGTGGACTCAAG-1     2  0.7395     0.4430 0.04 0.58 0.38
#> AGGGTTTGTTCATC-1     1  0.0000     0.9388 1.00 0.00 0.00
#> AGGTTCGAACCTCC-1     1  0.2959     0.8443 0.90 0.10 0.00
#> AGGTTCGAACGTAC-1     1  0.0000     0.9388 1.00 0.00 0.00
#> AGTCTACTAGGGTG-1     1  0.0000     0.9388 1.00 0.00 0.00
#> AGTGTTCTCACTTT-1     2  0.0892     0.8884 0.00 0.98 0.02
#> AGTTATGAACAGTC-1     2  0.3686     0.8451 0.00 0.86 0.14
#> AGTTCTACCAGCTA-1     3  0.2066     0.8542 0.06 0.00 0.94
#> ATAACAACATGCTG-1     3  0.0000     0.8762 0.00 0.00 1.00
#> ATAAGTTGGTACGT-1     1  0.0000     0.9388 1.00 0.00 0.00
#> ATAATGACTCGTGA-1     1  0.6280     0.1594 0.54 0.00 0.46
#> ATACCACTCGTACA-1     2  0.0000     0.8895 0.00 1.00 0.00
#> ATACCGGACATTTC-1     3  0.6192     0.1530 0.00 0.42 0.58
#> ATACCGGAGGTGTT-1     3  0.2537     0.8424 0.00 0.08 0.92
#> ATACGGACAGACTC-1     1  0.0000     0.9388 1.00 0.00 0.00
#> ATACGGACCTACTT-1     1  0.0000     0.9388 1.00 0.00 0.00
#> ATACGGACTCTGGA-1     1  0.0000     0.9388 1.00 0.00 0.00
#> ATACGTCTTAACGC-1     3  0.9293     0.1823 0.40 0.16 0.44
#> ATAGCGTGCCCTTG-1     2  0.0000     0.8895 0.00 1.00 0.00
#> ATAGCGTGGTATCG-1     1  0.0000     0.9388 1.00 0.00 0.00
#> ATAGTCCTAGTGTC-1     3  0.0000     0.8762 0.00 0.00 1.00
#> ATATAGTGGAATGA-1     1  0.0000     0.9388 1.00 0.00 0.00
#> ATATGCCTAGATCC-1     3  0.2959     0.8296 0.10 0.00 0.90
#> ATCAAATGAGCCTA-1     2  0.3686     0.8437 0.00 0.86 0.14
#> ATCCATACTCCTTA-1     2  0.0000     0.8895 0.00 1.00 0.00
#> ATCGCGCTCAGAGG-1     2  0.0892     0.8829 0.02 0.98 0.00
#> ATCGTTTGGGTACT-1     3  0.1529     0.8665 0.04 0.00 0.96
#> ATCGTTTGTGCCAA-1     1  0.0000     0.9388 1.00 0.00 0.00
#> ATCTACACCCGCTT-1     1  0.0000     0.9388 1.00 0.00 0.00
#> ATCTCAACCTTGTT-1     2  0.0892     0.8856 0.00 0.98 0.02
#> ATCTTGACCTCCCA-1     1  0.0000     0.9388 1.00 0.00 0.00
#> ATGCCAGACAGTCA-1     3  0.5706     0.5054 0.32 0.00 0.68
#> ATGTAAACTTCACT-1     2  0.3686     0.8407 0.00 0.86 0.14
#> ATGTACCTTTATCC-1     1  0.0000     0.9388 1.00 0.00 0.00
#> ATGTCACTAATGCC-1     2  0.3686     0.8431 0.00 0.86 0.14
#> ATGTTCACAGTCTG-1     3  0.0000     0.8762 0.00 0.00 1.00
#> ATTACCTGCCTTAT-1     2  0.2537     0.8755 0.00 0.92 0.08
#> ATTCCAACCATTGG-1     3  0.0000     0.8762 0.00 0.00 1.00
#> ATTCGACTGAATAG-1     3  0.5397     0.5480 0.00 0.28 0.72
#> ATTCGGGAAAGGCG-1     2  0.0000     0.8895 0.00 1.00 0.00
#> ATTGCACTGGAGCA-1     3  0.6192     0.2588 0.42 0.00 0.58
#> ATTTGCACAAGATG-1     1  0.0892     0.9223 0.98 0.02 0.00
#> CAAAGCTGTTGCTT-1     2  0.0000     0.8895 0.00 1.00 0.00
#> CAAATTGATGGAGG-1     1  0.0000     0.9388 1.00 0.00 0.00
#> CAACCAGATAGAAG-1     1  0.0000     0.9388 1.00 0.00 0.00
#> CAACGTGATCAAGC-1     3  0.0000     0.8762 0.00 0.00 1.00
#> CAAGTCGATAGCGT-1     3  0.2414     0.8639 0.04 0.02 0.94
#> CAATAAACGCCATA-1     1  0.0000     0.9388 1.00 0.00 0.00
#> CAATAATGAACTGC-1     2  0.0892     0.8815 0.02 0.98 0.00
#> CACAGATGGTTTCT-1     3  0.2959     0.8187 0.00 0.10 0.90
#> CACAGTGATGAAGA-1     3  0.1529     0.8625 0.00 0.04 0.96
#> CACTGAGACAGTCA-1     1  0.0000     0.9388 1.00 0.00 0.00
#> CAGCAATGTCTACT-1     2  0.0000     0.8895 0.00 1.00 0.00
#> CAGCAATGTGAGGG-1     1  0.0000     0.9388 1.00 0.00 0.00
#> CAGCATGACAACCA-1     2  0.6126     0.4630 0.00 0.60 0.40
#> CAGCCTTGCTACCC-1     2  0.3686     0.8186 0.00 0.86 0.14
#> CAGCTAGATGTGAC-1     1  0.0000     0.9388 1.00 0.00 0.00
#> CAGGAACTCTCAGA-1     1  0.6309     0.0105 0.50 0.00 0.50
#> CAGGTAACAGACTC-1     2  0.7112     0.5756 0.26 0.68 0.06
#> CATAAAACGGAGCA-1     2  0.0000     0.8895 0.00 1.00 0.00
#> CATACTACGTACCA-1     1  0.4002     0.7709 0.84 0.16 0.00
#> CATATAGACTAAGC-1     2  0.0000     0.8895 0.00 1.00 0.00
#> CATCAGGATTTCGT-1     1  0.0000     0.9388 1.00 0.00 0.00
#> CATGCGCTCAGATC-1     3  0.6924     0.3218 0.40 0.02 0.58
#> CATGGCCTAGGGTG-1     1  0.0000     0.9388 1.00 0.00 0.00
#> CATGTTTGGGGATG-1     2  0.4796     0.7705 0.00 0.78 0.22
#> CATTAGCTCCACAA-1     2  0.3686     0.8416 0.00 0.86 0.14
#> CATTGACTAGCGGA-1     2  0.0000     0.8895 0.00 1.00 0.00
#> CCAAAGTGTGAGAA-1     1  0.0000     0.9388 1.00 0.00 0.00
#> CCAACCTGACGTAC-1     2  0.2959     0.8645 0.00 0.90 0.10
#> CCAACCTGTTCGCC-1     2  0.0000     0.8895 0.00 1.00 0.00
#> CCAATTTGAACGTC-1     2  0.4002     0.8261 0.00 0.84 0.16
#> CCACTGACCCGCTT-1     2  0.0892     0.8881 0.00 0.98 0.02
#> CCACTGTGGGAAGC-1     1  0.0000     0.9388 1.00 0.00 0.00
#> CCAGCGGAAAGGCG-1     1  0.4796     0.6953 0.78 0.22 0.00
#> CCAGCGGACGACTA-1     2  0.2066     0.8796 0.00 0.94 0.06
#> CCAGGTCTAGCATC-1     3  0.4555     0.7145 0.20 0.00 0.80
#> CCAGTCACACTGGT-1     2  0.0000     0.8895 0.00 1.00 0.00
#> CCATCCGATTCGCC-1     1  0.0000     0.9388 1.00 0.00 0.00
#> CCCAACTGCAATCG-1     1  0.0000     0.9388 1.00 0.00 0.00
#> CCCGGAGAAGGGTG-1     1  0.0000     0.9388 1.00 0.00 0.00
#> CCCTACGAATTGGC-1     3  0.2537     0.8363 0.08 0.00 0.92
#> CCGCGAGACACACA-1     3  0.2959     0.8192 0.00 0.10 0.90
#> CCGCTATGTGCACA-1     2  0.5835     0.5901 0.00 0.66 0.34
#> CCTAAGGACTAGCA-1     1  0.5706     0.5226 0.68 0.00 0.32
#> CCTATAACGAGACG-1     1  0.0000     0.9388 1.00 0.00 0.00
#> CCTCTACTCTTCGC-1     2  0.1529     0.8850 0.00 0.96 0.04
#> CCTGCAACACGTTG-1     2  0.5016     0.7407 0.00 0.76 0.24
#> CCTTCACTGGAGTG-1     1  0.5948     0.4556 0.64 0.36 0.00
#> CCTTTAGATTCATC-1     2  0.5216     0.7225 0.00 0.74 0.26
#> CGAACATGCCCTAC-1     2  0.4796     0.7463 0.00 0.78 0.22
#> CGAATCGAGGAGCA-1     1  0.0000     0.9388 1.00 0.00 0.00
#> CGACTGCTTCCTCG-1     3  0.3042     0.8626 0.04 0.04 0.92
#> CGAGAACTTGTTCT-1     3  0.0000     0.8762 0.00 0.00 1.00
#> CGAGCGTGTATGCG-1     1  0.0000     0.9388 1.00 0.00 0.00
#> CGAGGCTGGCAGTT-1     2  0.0892     0.8878 0.00 0.98 0.02
#> CGATAGACCCGTAA-1     1  0.0000     0.9388 1.00 0.00 0.00
#> CGATAGACGTAGGG-1     1  0.2066     0.8903 0.94 0.00 0.06
#> CGCACTTGTCACGA-1     3  0.0000     0.8762 0.00 0.00 1.00
#> CGCATAGATCACGA-1     1  0.0000     0.9388 1.00 0.00 0.00
#> CGCGATCTCAGTCA-1     2  0.2066     0.8796 0.00 0.94 0.06
#> CGCGATCTGTTGAC-1     2  0.0000     0.8895 0.00 1.00 0.00
#> CGCTCATGCATTTC-1     1  0.2066     0.8862 0.94 0.06 0.00
#> CGGATAACAACGAA-1     2  0.0892     0.8882 0.00 0.98 0.02
#> CGGATAACTCAGTG-1     1  0.0000     0.9388 1.00 0.00 0.00
#> CGGCATCTTCGTAG-1     3  0.3686     0.7769 0.00 0.14 0.86
#> CGTAGCCTCTCTCG-1     2  0.0000     0.8895 0.00 1.00 0.00
#> CGTCAAGAAAGGTA-1     1  0.0000     0.9388 1.00 0.00 0.00
#> CGTGTAGAGTTCAG-1     3  0.1529     0.8682 0.04 0.00 0.96
#> CTAAGGACGCCATA-1     3  0.4796     0.6628 0.00 0.22 0.78
#> CTAATGCTTGTGGT-1     3  0.0892     0.8716 0.00 0.02 0.98
#> CTACTATGAACCAC-1     2  0.0892     0.8883 0.00 0.98 0.02
#> CTACTATGATGTGC-1     1  0.0892     0.9240 0.98 0.00 0.02
#> CTACTCCTGCCATA-1     1  0.0000     0.9388 1.00 0.00 0.00
#> CTATACTGAGGTTC-1     1  0.0892     0.9223 0.98 0.02 0.00
#> CTATACTGCGCTAA-1     3  0.1529     0.8690 0.04 0.00 0.96
#> CTATAGCTTCGCTC-1     3  0.0000     0.8762 0.00 0.00 1.00
#> CTATAGCTTGCCTC-1     2  0.2066     0.8796 0.00 0.94 0.06
#> CTATCCCTCCACCT-1     2  0.2959     0.8646 0.00 0.90 0.10
#> CTATTGACAAACGA-1     1  0.0000     0.9388 1.00 0.00 0.00
#> CTCAATTGGTTGCA-1     3  0.0000     0.8762 0.00 0.00 1.00
#> CTCAGCACTGAACC-1     1  0.0000     0.9388 1.00 0.00 0.00
#> CTCAGCTGAACCTG-1     2  0.0000     0.8895 0.00 1.00 0.00
#> CTCCTACTGCCTTC-1     1  0.0000     0.9388 1.00 0.00 0.00
#> CTCGAAGATTAGGC-1     2  0.0892     0.8883 0.00 0.98 0.02
#> CTCTAATGTCCAAG-1     3  0.1529     0.8638 0.00 0.04 0.96
#> CTGCCAACTAACCG-1     2  0.8884     0.0631 0.12 0.46 0.42
#> CTGGCACTCAAGCT-1     2  0.0892     0.8870 0.00 0.98 0.02
#> CTGTGAGACGAACT-1     3  0.0892     0.8721 0.00 0.02 0.98
#> CTGTGAGACTGTAG-1     2  0.0000     0.8895 0.00 1.00 0.00
#> CTTACAACTCCCGT-1     3  0.5216     0.6337 0.26 0.00 0.74
#> CTTGATTGATCTTC-1     2  0.3686     0.7768 0.14 0.86 0.00
#> GAAAGATGCTTCGC-1     2  0.0000     0.8895 0.00 1.00 0.00
#> GAAAGTGACCACAA-1     2  0.4796     0.7682 0.00 0.78 0.22
#> GAAATACTACCAAC-1     1  0.0000     0.9388 1.00 0.00 0.00
#> GAACTGTGCCAGTA-1     3  0.0000     0.8762 0.00 0.00 1.00
#> GAAGGGTGCTTAGG-1     2  0.2537     0.8730 0.00 0.92 0.08
#> GAAGTCACCCTCGT-1     1  0.6984     0.2439 0.56 0.42 0.02
#> GACCAAACGACTAC-1     3  0.2959     0.8340 0.10 0.00 0.90
#> GACCAAACGTATCG-1     3  0.0000     0.8762 0.00 0.00 1.00
#> GACGTCCTCTCAAG-1     2  0.4796     0.7729 0.00 0.78 0.22
#> GACTCCTGTTGGTG-1     2  0.0000     0.8895 0.00 1.00 0.00
#> GACTGAACCAATCG-1     2  0.0000     0.8895 0.00 1.00 0.00
#> GAGCGCACGCGTAT-1     3  0.5016     0.6588 0.24 0.00 0.76
#> GAGCGCTGTCTTAC-1     1  0.7578     0.0548 0.50 0.46 0.04
#> GAGGTACTACTCAG-1     2  0.7029     0.1376 0.02 0.54 0.44
#> GAGGTTTGTAAGCC-1     1  0.0000     0.9388 1.00 0.00 0.00
#> GAGTTGTGCATGGT-1     1  0.0000     0.9388 1.00 0.00 0.00
#> GAGTTGTGGCGAGA-1     2  0.6280     0.1336 0.46 0.54 0.00
#> GATAAGGAGAAACA-1     1  0.0000     0.9388 1.00 0.00 0.00
#> GATAAGGATTCACT-1     2  0.2066     0.8808 0.00 0.94 0.06
#> GATACTCTTGACTG-1     2  0.0892     0.8856 0.00 0.98 0.02
#> GATAGAGATCACGA-1     2  0.0000     0.8895 0.00 1.00 0.00
#> GATATATGTGGAGG-1     2  0.0000     0.8895 0.00 1.00 0.00
#> GATATCCTCCCGTT-1     1  0.0000     0.9388 1.00 0.00 0.00
#> GATCCGCTGGTCAT-1     3  0.6192     0.1516 0.00 0.42 0.58
#> GATCGATGTAAGGA-1     2  0.2959     0.8651 0.00 0.90 0.10
#> GATCTTACGAATAG-1     1  0.0000     0.9388 1.00 0.00 0.00
#> GATCTTACGAGATA-1     2  0.4796     0.7584 0.00 0.78 0.22
#> GATGCCCTGGCAAG-1     2  0.0000     0.8895 0.00 1.00 0.00
#> GATTTAGATTCGTT-1     1  0.0000     0.9388 1.00 0.00 0.00
#> GATTTGCTAACGGG-1     1  0.0000     0.9388 1.00 0.00 0.00
#> GCAACCCTCCTCGT-1     1  0.0000     0.9388 1.00 0.00 0.00
#> GCAATCGATCCTTA-1     2  0.4555     0.7882 0.00 0.80 0.20
#> GCACAATGGTGCAT-1     2  0.0000     0.8895 0.00 1.00 0.00
#> GCACCACTCATGAC-1     2  0.0000     0.8895 0.00 1.00 0.00
#> GCACCACTGTTTGG-1     1  0.0000     0.9388 1.00 0.00 0.00
#> GCACCACTTTCGGA-1     3  0.2066     0.8515 0.00 0.06 0.94
#> GCCACGGAGGCGAA-1     1  0.0000     0.9388 1.00 0.00 0.00
#> GCCGTACTGGCAAG-1     1  0.4002     0.7879 0.84 0.00 0.16
#> GCCTGACTCTCAAG-1     2  0.0000     0.8895 0.00 1.00 0.00
#> GCGAGCACTTGCTT-1     2  0.5706     0.6278 0.00 0.68 0.32
#> GCGCACGACTTTAC-1     2  0.0000     0.8895 0.00 1.00 0.00
#> GCGGCAACTGTCGA-1     1  0.0000     0.9388 1.00 0.00 0.00
#> GCTACCTGAGAAGT-1     3  0.5397     0.5545 0.00 0.28 0.72
#> GCTAGATGAGCTCA-1     2  0.6302     0.2145 0.00 0.52 0.48
#> GCTCGACTCTAGTG-1     1  0.0000     0.9388 1.00 0.00 0.00
#> GCTGATGAGGTATC-1     2  0.0000     0.8895 0.00 1.00 0.00
#> GCTTAACTACAGTC-1     1  0.0000     0.9388 1.00 0.00 0.00
#> GCTTAACTTAGACC-1     1  0.0000     0.9388 1.00 0.00 0.00
#> GGAACACTCACTTT-1     1  0.0000     0.9388 1.00 0.00 0.00
#> GGAACTTGCTCCAC-1     2  0.4555     0.7912 0.00 0.80 0.20
#> GGAAGGACATCGGT-1     2  0.0000     0.8895 0.00 1.00 0.00
#> GGAATCTGCTTGTT-1     3  0.0892     0.8714 0.00 0.02 0.98
#> GGACCGTGCTTACT-1     2  0.4291     0.7338 0.18 0.82 0.00
#> GGACCTCTGTAAGA-1     3  0.0892     0.8716 0.02 0.00 0.98
#> GGACGAGAGTGTCA-1     1  0.0000     0.9388 1.00 0.00 0.00
#> GGAGGATGGTTGAC-1     1  0.5016     0.6736 0.76 0.00 0.24
#> GGAGGATGTCAGTG-1     3  0.0892     0.8716 0.02 0.00 0.98
#> GGATGTACGTCTTT-1     1  0.0000     0.9388 1.00 0.00 0.00
#> GGCAAGGACTTGGA-1     2  0.3340     0.8547 0.00 0.88 0.12
#> GGCCCAGAAAGTAG-1     2  0.4002     0.8291 0.00 0.84 0.16
#> GGCTCACTACTCAG-1     2  0.1529     0.8850 0.00 0.96 0.04
#> GGGAACGAGTGTCA-1     1  0.6302     0.0942 0.52 0.00 0.48
#> GGGAAGTGTTGAGC-1     1  0.0000     0.9388 1.00 0.00 0.00
#> GGGACCTGACCCTC-1     2  0.0892     0.8883 0.00 0.98 0.02
#> GGGATGGATGGTTG-1     3  0.0000     0.8762 0.00 0.00 1.00
#> GGGCAAGATGCATG-1     1  0.0000     0.9388 1.00 0.00 0.00
#> GGGCCAACTACGCA-1     3  0.2959     0.8231 0.10 0.00 0.90
#> GGTACTGAACTCTT-1     3  0.0000     0.8762 0.00 0.00 1.00
#> GGTAGTACACTAGC-1     2  0.4002     0.7543 0.16 0.84 0.00
#> GGTAGTACGCCATA-1     1  0.0000     0.9388 1.00 0.00 0.00
#> GGTATCGAGACAAA-1     1  0.0000     0.9388 1.00 0.00 0.00
#> GGTCTAGAGAAACA-1     2  0.0892     0.8828 0.02 0.98 0.00
#> GGTGATACGACTAC-1     2  0.3686     0.8409 0.00 0.86 0.14
#> GGTGGAGATCTCTA-1     1  0.0000     0.9388 1.00 0.00 0.00
#> GTAAGCTGGTACCA-1     2  0.1529     0.8712 0.04 0.96 0.00
#> GTAATAACCTTCTA-1     2  0.7633     0.5819 0.12 0.68 0.20
#> GTAGACTGAGATGA-1     3  0.4002     0.7694 0.16 0.00 0.84
#> GTAGCAACAGTCGT-1     2  0.0000     0.8895 0.00 1.00 0.00
#> GTAGCAACGGTAGG-1     1  0.0000     0.9388 1.00 0.00 0.00
#> GTAGCATGTAAGCC-1     1  0.2066     0.8922 0.94 0.00 0.06
#> GTAGGTACACGGGA-1     2  0.4002     0.8287 0.00 0.84 0.16
#> GTAGTGTGAGGCGA-1     1  0.5216     0.6377 0.74 0.00 0.26
#> GTATCACTGGTAGG-1     2  0.2537     0.8733 0.00 0.92 0.08
#> GTCAACGAGTGTAC-1     3  0.0000     0.8762 0.00 0.00 1.00
#> GTCTAGGAGCTTCC-1     2  0.3686     0.8415 0.00 0.86 0.14
#> GTGATTCTCTCTCG-1     2  0.0000     0.8895 0.00 1.00 0.00
#> GTTTAAGACCATGA-1     2  0.3686     0.8434 0.00 0.86 0.14
#> TAACACCTTCGCTC-1     2  0.4796     0.7690 0.00 0.78 0.22
#> TAACGTCTCAACCA-1     2  0.9823    -0.0515 0.26 0.42 0.32
#> TAACTCACGAGGAC-1     1  0.6302     0.0823 0.52 0.00 0.48
#> TAACTCACGTATCG-1     2  0.0892     0.8884 0.00 0.98 0.02
#> TAAGAACTGTGTCA-1     2  0.3686     0.7765 0.14 0.86 0.00
#> TAAGATACGGTTCA-1     1  0.5948     0.4343 0.64 0.00 0.36
#> TAAGCGTGAGGTTC-1     2  0.3686     0.8446 0.00 0.86 0.14
#> TACAATGAAAACAG-1     3  0.0000     0.8762 0.00 0.00 1.00
#> TACCATTGCGGGAA-1     1  0.0000     0.9388 1.00 0.00 0.00
#> TACCATTGGGGATG-1     1  0.2959     0.8448 0.90 0.10 0.00
#> TACCATTGTGAGGG-1     2  0.0000     0.8895 0.00 1.00 0.00
#> TACGTTACCAAGCT-1     1  0.6309     0.0120 0.50 0.00 0.50
#> TACTAAGATGATGC-1     3  0.0000     0.8762 0.00 0.00 1.00
#> TACTACTGAACCTG-1     2  0.1529     0.8835 0.00 0.96 0.04
#> TACTCAACGGTCTA-1     2  0.0000     0.8895 0.00 1.00 0.00
#> TAGAAACTGCTTCC-1     2  0.0000     0.8895 0.00 1.00 0.00
#> TAGGCTGATGCCTC-1     2  0.0000     0.8895 0.00 1.00 0.00
#> TAGGTTCTTGCTGA-1     3  0.4555     0.6964 0.00 0.20 0.80
#> TAGTACCTAAGAAC-1     2  0.5397     0.6955 0.00 0.72 0.28
#> TATAAGTGTATCGG-1     1  0.0000     0.9388 1.00 0.00 0.00
#> TATCCAACCAGCTA-1     1  0.0000     0.9388 1.00 0.00 0.00
#> TATCGTACATTCCT-1     2  0.5216     0.7205 0.00 0.74 0.26
#> TATGTGCTCCGATA-1     3  0.4002     0.7519 0.00 0.16 0.84
#> TATTGCTGAAGAAC-1     1  0.0000     0.9388 1.00 0.00 0.00
#> TATTTCCTATTGGC-1     1  0.0000     0.9388 1.00 0.00 0.00
#> TCAAGGACGGTGTT-1     2  0.0000     0.8895 0.00 1.00 0.00
#> TCACAACTTTGCTT-1     1  0.0000     0.9388 1.00 0.00 0.00
#> TCAGTTACCTACGA-1     3  0.0000     0.8762 0.00 0.00 1.00
#> TCCACTCTGAGCTT-1     3  0.2537     0.8373 0.00 0.08 0.92
#> TCCCATCTCAAAGA-1     3  0.0000     0.8762 0.00 0.00 1.00
#> TCCCGATGCCTGAA-1     1  0.0000     0.9388 1.00 0.00 0.00
#> TCCGAAGACAATCG-1     1  0.0892     0.9240 0.98 0.00 0.02
#> TCGACGCTTCTATC-1     2  0.4555     0.7921 0.00 0.80 0.20
#> TCGATTTGATGCCA-1     2  0.0000     0.8895 0.00 1.00 0.00
#> TCGATTTGCCTACC-1     3  0.6302    -0.0933 0.00 0.48 0.52
#> TCTAAGCTTGTTCT-1     2  0.2959     0.8654 0.00 0.90 0.10
#> TCTAGACTTAGAAG-1     1  0.0892     0.9239 0.98 0.00 0.02
#> TCTATGTGAAGAGT-1     1  0.0000     0.9388 1.00 0.00 0.00
#> TCTTACGAACCTGA-1     3  0.0892     0.8715 0.00 0.02 0.98
#> TGAAATTGGTGAGG-1     2  0.2066     0.8801 0.00 0.94 0.06
#> TGACGATGCAAAGA-1     2  0.0000     0.8895 0.00 1.00 0.00
#> TGACTGGAAGAGAT-1     1  0.0000     0.9388 1.00 0.00 0.00
#> TGAGCTGACTGGAT-1     3  0.5216     0.6155 0.00 0.26 0.74
#> TGAGCTGATGCTAG-1     1  0.0000     0.9388 1.00 0.00 0.00
#> TGAGGACTCTCATT-1     3  0.6244     0.1538 0.00 0.44 0.56
#> TGATACCTCACTAG-1     2  0.5397     0.5934 0.28 0.72 0.00
#> TGCAAGTGGGTAGG-1     2  0.0892     0.8826 0.02 0.98 0.00
#> TGCCAAGAGCAGTT-1     2  0.1529     0.8733 0.04 0.96 0.00
#> TGCGATGAGTGCTA-1     3  0.0000     0.8762 0.00 0.00 1.00
#> TGCGCACTCTTGAG-1     1  0.0000     0.9388 1.00 0.00 0.00
#> TGCGTAGAATAAGG-1     1  0.1529     0.9086 0.96 0.00 0.04
#> TGCTATACGGTTCA-1     2  0.0000     0.8895 0.00 1.00 0.00
#> TGGACCCTACACTG-1     1  0.0000     0.9388 1.00 0.00 0.00
#> TGGAGACTATCAGC-1     2  0.1529     0.8850 0.00 0.96 0.04
#> TGGAGGGACGGAGA-1     1  0.4291     0.7621 0.82 0.00 0.18
#> TGGGTATGTTTGGG-1     1  0.2066     0.8822 0.94 0.06 0.00
#> TGGTAGTGCACTGA-1     1  0.0000     0.9388 1.00 0.00 0.00
#> TGGTTACTGACGTT-1     2  0.1529     0.8850 0.00 0.96 0.04
#> TGTTAAGACAAAGA-1     1  0.0000     0.9388 1.00 0.00 0.00
#> TGTTAAGATAAGGA-1     3  0.1529     0.8661 0.04 0.00 0.96
#> TGTTACACGACTAC-1     1  0.0000     0.9388 1.00 0.00 0.00
#> TTACCATGAATCGC-1     3  0.2959     0.8227 0.10 0.00 0.90
#> TTACGACTTGACAC-1     2  0.0000     0.8895 0.00 1.00 0.00
#> TTACTCGAAGAATG-1     2  0.1529     0.8857 0.00 0.96 0.04
#> TTAGACCTCCTTTA-1     3  0.6109     0.7725 0.08 0.14 0.78
#> TTAGGTCTACTTTC-1     1  0.0000     0.9388 1.00 0.00 0.00
#> TTCAACACCCCAAA-1     2  0.4209     0.7970 0.12 0.86 0.02
#> TTCAAGCTAAGAAC-1     3  0.0892     0.8720 0.00 0.02 0.98
#> TTCACAACGTCTGA-1     1  0.0000     0.9388 1.00 0.00 0.00
#> TTCAGTACTCCTAT-1     3  0.3340     0.8164 0.12 0.00 0.88
#> TTCAGTTGTCCTTA-1     2  0.0000     0.8895 0.00 1.00 0.00
#> TTCATCGAGGTGGA-1     2  0.0000     0.8895 0.00 1.00 0.00
#> TTCATTCTATGTCG-1     3  0.3832     0.8158 0.02 0.10 0.88
#> TTCCAAACCTATGG-1     1  0.2066     0.8913 0.94 0.00 0.06
#> TTCCATGACGAGAG-1     2  0.5216     0.6710 0.00 0.74 0.26
#> TTCCCACTTGTCTT-1     2  0.3340     0.8556 0.00 0.88 0.12
#> TTCGGAGAATGCCA-1     3  0.6280     0.1212 0.46 0.00 0.54
#> TTCTAGTGCATGAC-1     2  0.2537     0.8703 0.00 0.92 0.08
#> TTGAGGACAGAACA-1     2  0.2537     0.8654 0.00 0.92 0.08
#> TTGCATTGCTAAGC-1     3  0.0892     0.8713 0.00 0.02 0.98
#> TTGGAGACGCTATG-1     2  0.5397     0.6588 0.00 0.72 0.28
#> TTTAGCTGGATACC-1     2  0.0000     0.8895 0.00 1.00 0.00
#> TTTAGCTGTACTCT-1     2  0.0000     0.8895 0.00 1.00 0.00
#> TTTAGGCTCCTTTA-1     1  0.5159     0.7664 0.82 0.14 0.04
#> TTTCAGTGTCTATC-1     1  0.0000     0.9388 1.00 0.00 0.00
#> TTTCGAACTCTCAT-1     2  0.3340     0.8535 0.00 0.88 0.12

show/hide code output

cbind(get_classes(res, k = 4), get_membership(res, k = 4))
#>                  class entropy silhouette   p1   p2   p3   p4
#> AAACGCTGTTTCTG-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> AAAGAGACGCGAGA-1     2  0.0000   0.799437 0.00 1.00 0.00 0.00
#> AAAGTTTGTAGCGT-1     3  0.6220   0.605625 0.04 0.04 0.68 0.24
#> AAATGTTGAACGAA-1     2  0.0707   0.799670 0.00 0.98 0.00 0.02
#> AAATTCGAATCACG-1     4  0.3400   0.771441 0.00 0.18 0.00 0.82
#> AACACGTGGAACCT-1     3  0.0000   0.821892 0.00 0.00 1.00 0.00
#> AACAGCACAAGAGT-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> AACCGATGTTCTAC-1     4  0.1637   0.810687 0.00 0.06 0.00 0.94
#> AACTCACTCAAGCT-1     2  0.1211   0.793678 0.00 0.96 0.04 0.00
#> AACTCACTTGGAGG-1     4  0.2647   0.805525 0.00 0.12 0.00 0.88
#> AACTCGGAAGGTCT-1     1  0.0707   0.920038 0.98 0.00 0.00 0.02
#> AACTGTCTCCCTTG-1     2  0.3610   0.709365 0.00 0.80 0.00 0.20
#> AAGACAGATTACCT-1     3  0.0707   0.824444 0.00 0.02 0.98 0.00
#> AAGATTACCCGTTC-1     3  0.5422   0.707490 0.02 0.20 0.74 0.04
#> AAGATTACCGCCTT-1     2  0.1211   0.797877 0.00 0.96 0.00 0.04
#> AAGATTACTCCTCG-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> AAGCCATGACACGT-1     1  0.4797   0.618663 0.72 0.00 0.26 0.02
#> AAGCCTGACCGAAT-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> AAGGTCACGGTTAC-1     1  0.1411   0.908853 0.96 0.00 0.02 0.02
#> AAGTAACTCTGAAC-1     2  0.3801   0.714896 0.00 0.78 0.00 0.22
#> AATCCTTGACGGGA-1     2  0.4907   0.290944 0.00 0.58 0.00 0.42
#> AATGCGTGGACGGA-1     2  0.4522   0.489855 0.00 0.68 0.00 0.32
#> AATGGAGAATCGTG-1     2  0.4553   0.672908 0.00 0.78 0.04 0.18
#> AATGTTGAGTTGAC-1     3  0.0707   0.824444 0.00 0.02 0.98 0.00
#> ACAAATTGCTCAGA-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> ACACGATGATGTGC-1     2  0.0707   0.798777 0.00 0.98 0.02 0.00
#> ACAGCAACACCTAG-1     1  0.0707   0.920038 0.98 0.00 0.00 0.02
#> ACAGTGTGTTGCGA-1     3  0.0707   0.824444 0.00 0.02 0.98 0.00
#> ACATCACTCTACTT-1     2  0.4790   0.365716 0.00 0.62 0.38 0.00
#> ACATTCTGGGAACG-1     2  0.3400   0.718629 0.00 0.82 0.00 0.18
#> ACCAGTGATGACTG-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> ACCCACTGCGCCTT-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> ACCCAGCTGTTAGC-1     2  0.2011   0.783077 0.00 0.92 0.00 0.08
#> ACCCTCGATCAAGC-1     1  0.0707   0.920038 0.98 0.00 0.00 0.02
#> ACCTGAGATATCGG-1     1  0.2011   0.877034 0.92 0.00 0.00 0.08
#> ACGATCGAGTCACA-1     2  0.0000   0.799437 0.00 1.00 0.00 0.00
#> ACGCCACTGAACTC-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> ACGCCGGAAACCAC-1     2  0.2011   0.787996 0.00 0.92 0.00 0.08
#> ACGGAGGACTCTTA-1     3  0.1211   0.823571 0.00 0.04 0.96 0.00
#> ACGGTATGAGTCGT-1     4  0.3106   0.797273 0.04 0.04 0.02 0.90
#> ACGTCAGAGAGCTT-1     3  0.6074   0.447273 0.34 0.00 0.60 0.06
#> ACGTCCTGATAAGG-1     2  0.4994   0.001820 0.00 0.52 0.00 0.48
#> ACGTCGCTCTATTC-1     4  0.2921   0.787541 0.00 0.14 0.00 0.86
#> ACGTTGGACCGTAA-1     1  0.4211   0.814839 0.84 0.02 0.04 0.10
#> ACTAAAACTCGACA-1     4  0.4553   0.768004 0.00 0.18 0.04 0.78
#> ACTCAGGATTCGTT-1     1  0.0707   0.918687 0.98 0.00 0.00 0.02
#> ACTCGCACGAAAGT-1     3  0.0707   0.824444 0.00 0.02 0.98 0.00
#> ACTCGCACTACGAC-1     2  0.4713   0.448180 0.00 0.64 0.00 0.36
#> ACTGTTACCCACAA-1     1  0.1637   0.894100 0.94 0.00 0.00 0.06
#> ACTTAAGATTACTC-1     2  0.2647   0.768033 0.00 0.88 0.00 0.12
#> ACTTGGGAGAAAGT-1     2  0.0000   0.799437 0.00 1.00 0.00 0.00
#> ACTTGGGATGTGAC-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> AGAAAGTGGGGATG-1     4  0.2647   0.806999 0.00 0.12 0.00 0.88
#> AGACACTGTCAAGC-1     3  0.5677   0.654200 0.00 0.14 0.72 0.14
#> AGACCTGAAGTAGA-1     2  0.0707   0.797486 0.00 0.98 0.02 0.00
#> AGACGTACCTCTTA-1     2  0.3610   0.679879 0.00 0.80 0.00 0.20
#> AGAGATGAGGTTTG-1     3  0.1913   0.816370 0.04 0.00 0.94 0.02
#> AGATCGTGTCTGGA-1     2  0.1211   0.797877 0.00 0.96 0.00 0.04
#> AGATTCCTCACTTT-1     2  0.2921   0.747074 0.00 0.86 0.00 0.14
#> AGATTCCTGACGAG-1     2  0.1211   0.795291 0.00 0.96 0.04 0.00
#> AGCATCGAGCTTCC-1     3  0.0707   0.824444 0.00 0.02 0.98 0.00
#> AGCTGCCTTGGGAG-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> AGGGCGCTAACCAC-1     4  0.1637   0.811587 0.00 0.06 0.00 0.94
#> AGGGTGGACTCAAG-1     2  0.3247   0.771697 0.00 0.88 0.06 0.06
#> AGGGTTTGTTCATC-1     1  0.1913   0.897165 0.94 0.00 0.02 0.04
#> AGGTTCGAACCTCC-1     4  0.2345   0.757614 0.10 0.00 0.00 0.90
#> AGGTTCGAACGTAC-1     1  0.4994   0.140452 0.52 0.00 0.00 0.48
#> AGTCTACTAGGGTG-1     1  0.2921   0.836570 0.86 0.00 0.00 0.14
#> AGTGTTCTCACTTT-1     2  0.2011   0.784420 0.00 0.92 0.00 0.08
#> AGTTATGAACAGTC-1     2  0.2011   0.783808 0.00 0.92 0.00 0.08
#> AGTTCTACCAGCTA-1     3  0.0000   0.821892 0.00 0.00 1.00 0.00
#> ATAACAACATGCTG-1     3  0.0707   0.825580 0.00 0.02 0.98 0.00
#> ATAAGTTGGTACGT-1     1  0.0707   0.920038 0.98 0.00 0.00 0.02
#> ATAATGACTCGTGA-1     3  0.4553   0.725094 0.18 0.00 0.78 0.04
#> ATACCACTCGTACA-1     2  0.2647   0.762958 0.00 0.88 0.00 0.12
#> ATACCGGACATTTC-1     2  0.3335   0.743708 0.00 0.86 0.12 0.02
#> ATACCGGAGGTGTT-1     3  0.5175   0.714141 0.00 0.12 0.76 0.12
#> ATACGGACAGACTC-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> ATACGGACCTACTT-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> ATACGGACTCTGGA-1     1  0.3172   0.811837 0.84 0.00 0.00 0.16
#> ATACGTCTTAACGC-1     3  0.9257   0.234263 0.36 0.12 0.36 0.16
#> ATAGCGTGCCCTTG-1     2  0.2011   0.785259 0.00 0.92 0.00 0.08
#> ATAGCGTGGTATCG-1     1  0.2345   0.860766 0.90 0.00 0.00 0.10
#> ATAGTCCTAGTGTC-1     3  0.4522   0.525343 0.00 0.32 0.68 0.00
#> ATATAGTGGAATGA-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> ATATGCCTAGATCC-1     3  0.3935   0.794971 0.06 0.02 0.86 0.06
#> ATCAAATGAGCCTA-1     2  0.1211   0.799720 0.00 0.96 0.00 0.04
#> ATCCATACTCCTTA-1     4  0.2345   0.810034 0.00 0.10 0.00 0.90
#> ATCGCGCTCAGAGG-1     4  0.1637   0.812521 0.00 0.06 0.00 0.94
#> ATCGTTTGGGTACT-1     3  0.0000   0.821892 0.00 0.00 1.00 0.00
#> ATCGTTTGTGCCAA-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> ATCTACACCCGCTT-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> ATCTCAACCTTGTT-1     4  0.4134   0.686946 0.00 0.26 0.00 0.74
#> ATCTTGACCTCCCA-1     1  0.1913   0.897165 0.94 0.00 0.02 0.04
#> ATGCCAGACAGTCA-1     3  0.4079   0.725376 0.18 0.00 0.80 0.02
#> ATGTAAACTTCACT-1     2  0.0707   0.797265 0.00 0.98 0.00 0.02
#> ATGTACCTTTATCC-1     1  0.0707   0.918995 0.98 0.00 0.00 0.02
#> ATGTCACTAATGCC-1     2  0.0000   0.799437 0.00 1.00 0.00 0.00
#> ATGTTCACAGTCTG-1     3  0.0707   0.825475 0.00 0.02 0.98 0.00
#> ATTACCTGCCTTAT-1     2  0.2345   0.769754 0.00 0.90 0.00 0.10
#> ATTCCAACCATTGG-1     3  0.3975   0.673960 0.00 0.24 0.76 0.00
#> ATTCGACTGAATAG-1     2  0.4936   0.560777 0.00 0.70 0.28 0.02
#> ATTCGGGAAAGGCG-1     2  0.4406   0.538116 0.00 0.70 0.00 0.30
#> ATTGCACTGGAGCA-1     3  0.3975   0.672319 0.24 0.00 0.76 0.00
#> ATTTGCACAAGATG-1     1  0.4713   0.473827 0.64 0.00 0.00 0.36
#> CAAAGCTGTTGCTT-1     2  0.4790   0.384923 0.00 0.62 0.00 0.38
#> CAAATTGATGGAGG-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> CAACCAGATAGAAG-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> CAACGTGATCAAGC-1     3  0.4079   0.727342 0.00 0.18 0.80 0.02
#> CAAGTCGATAGCGT-1     3  0.2011   0.813711 0.00 0.08 0.92 0.00
#> CAATAAACGCCATA-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> CAATAATGAACTGC-1     4  0.1211   0.807399 0.00 0.04 0.00 0.96
#> CACAGATGGTTTCT-1     2  0.4713   0.429345 0.00 0.64 0.36 0.00
#> CACAGTGATGAAGA-1     2  0.4994   0.057728 0.00 0.52 0.48 0.00
#> CACTGAGACAGTCA-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> CAGCAATGTCTACT-1     2  0.4790   0.366330 0.00 0.62 0.00 0.38
#> CAGCAATGTGAGGG-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> CAGCATGACAACCA-1     2  0.0707   0.799634 0.00 0.98 0.02 0.00
#> CAGCCTTGCTACCC-1     4  0.5713   0.541635 0.00 0.34 0.04 0.62
#> CAGCTAGATGTGAC-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> CAGGAACTCTCAGA-1     3  0.4406   0.582748 0.30 0.00 0.70 0.00
#> CAGGTAACAGACTC-1     4  0.6623   0.440273 0.06 0.32 0.02 0.60
#> CATAAAACGGAGCA-1     4  0.4277   0.667614 0.00 0.28 0.00 0.72
#> CATACTACGTACCA-1     1  0.4994   0.148480 0.52 0.00 0.00 0.48
#> CATATAGACTAAGC-1     2  0.4855   0.346046 0.00 0.60 0.00 0.40
#> CATCAGGATTTCGT-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> CATGCGCTCAGATC-1     3  0.6216   0.611560 0.12 0.00 0.66 0.22
#> CATGGCCTAGGGTG-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> CATGTTTGGGGATG-1     2  0.2706   0.791555 0.00 0.90 0.02 0.08
#> CATTAGCTCCACAA-1     2  0.0000   0.799437 0.00 1.00 0.00 0.00
#> CATTGACTAGCGGA-1     4  0.4624   0.565120 0.00 0.34 0.00 0.66
#> CCAAAGTGTGAGAA-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> CCAACCTGACGTAC-1     2  0.3853   0.715578 0.00 0.82 0.02 0.16
#> CCAACCTGTTCGCC-1     4  0.2011   0.812494 0.00 0.08 0.00 0.92
#> CCAATTTGAACGTC-1     2  0.1211   0.798120 0.00 0.96 0.00 0.04
#> CCACTGACCCGCTT-1     2  0.3400   0.726586 0.00 0.82 0.00 0.18
#> CCACTGTGGGAAGC-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> CCAGCGGAAAGGCG-1     4  0.2921   0.715594 0.14 0.00 0.00 0.86
#> CCAGCGGACGACTA-1     2  0.0707   0.797265 0.00 0.98 0.00 0.02
#> CCAGGTCTAGCATC-1     3  0.1211   0.819810 0.04 0.00 0.96 0.00
#> CCAGTCACACTGGT-1     2  0.3610   0.702578 0.00 0.80 0.00 0.20
#> CCATCCGATTCGCC-1     1  0.0707   0.919030 0.98 0.00 0.02 0.00
#> CCCAACTGCAATCG-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> CCCGGAGAAGGGTG-1     1  0.3172   0.800973 0.84 0.00 0.00 0.16
#> CCCTACGAATTGGC-1     3  0.0000   0.821892 0.00 0.00 1.00 0.00
#> CCGCGAGACACACA-1     2  0.4977   0.144942 0.00 0.54 0.46 0.00
#> CCGCTATGTGCACA-1     2  0.2830   0.785054 0.00 0.90 0.06 0.04
#> CCTAAGGACTAGCA-1     1  0.5570   0.125313 0.54 0.00 0.44 0.02
#> CCTATAACGAGACG-1     1  0.0707   0.920038 0.98 0.00 0.00 0.02
#> CCTCTACTCTTCGC-1     2  0.1637   0.789405 0.00 0.94 0.00 0.06
#> CCTGCAACACGTTG-1     2  0.3037   0.775941 0.00 0.88 0.02 0.10
#> CCTTCACTGGAGTG-1     4  0.1913   0.795577 0.04 0.02 0.00 0.94
#> CCTTTAGATTCATC-1     2  0.0707   0.797486 0.00 0.98 0.02 0.00
#> CGAACATGCCCTAC-1     2  0.6831   0.139242 0.00 0.48 0.10 0.42
#> CGAATCGAGGAGCA-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> CGACTGCTTCCTCG-1     3  0.5241   0.757690 0.04 0.14 0.78 0.04
#> CGAGAACTTGTTCT-1     3  0.0707   0.824444 0.00 0.02 0.98 0.00
#> CGAGCGTGTATGCG-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> CGAGGCTGGCAGTT-1     2  0.4855   0.362725 0.00 0.60 0.00 0.40
#> CGATAGACCCGTAA-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> CGATAGACGTAGGG-1     1  0.3525   0.830867 0.86 0.00 0.10 0.04
#> CGCACTTGTCACGA-1     3  0.3610   0.715861 0.00 0.20 0.80 0.00
#> CGCATAGATCACGA-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> CGCGATCTCAGTCA-1     2  0.0707   0.797265 0.00 0.98 0.00 0.02
#> CGCGATCTGTTGAC-1     4  0.2921   0.798651 0.00 0.14 0.00 0.86
#> CGCTCATGCATTTC-1     1  0.4332   0.755616 0.80 0.04 0.00 0.16
#> CGGATAACAACGAA-1     2  0.3400   0.708994 0.00 0.82 0.00 0.18
#> CGGATAACTCAGTG-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> CGGCATCTTCGTAG-1     2  0.3801   0.675284 0.00 0.78 0.22 0.00
#> CGTAGCCTCTCTCG-1     4  0.2345   0.812071 0.00 0.10 0.00 0.90
#> CGTCAAGAAAGGTA-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> CGTGTAGAGTTCAG-1     3  0.1637   0.814121 0.06 0.00 0.94 0.00
#> CTAAGGACGCCATA-1     2  0.3610   0.694543 0.00 0.80 0.20 0.00
#> CTAATGCTTGTGGT-1     3  0.2011   0.809467 0.00 0.08 0.92 0.00
#> CTACTATGAACCAC-1     2  0.0000   0.799437 0.00 1.00 0.00 0.00
#> CTACTATGATGTGC-1     1  0.3247   0.848128 0.88 0.00 0.06 0.06
#> CTACTCCTGCCATA-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> CTATACTGAGGTTC-1     1  0.4624   0.519933 0.66 0.00 0.00 0.34
#> CTATACTGCGCTAA-1     3  0.2830   0.809828 0.00 0.04 0.90 0.06
#> CTATAGCTTCGCTC-1     3  0.1637   0.819098 0.00 0.06 0.94 0.00
#> CTATAGCTTGCCTC-1     2  0.0707   0.799170 0.00 0.98 0.00 0.02
#> CTATCCCTCCACCT-1     2  0.3400   0.719890 0.00 0.82 0.00 0.18
#> CTATTGACAAACGA-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> CTCAATTGGTTGCA-1     3  0.1637   0.819319 0.00 0.06 0.94 0.00
#> CTCAGCACTGAACC-1     1  0.0707   0.920038 0.98 0.00 0.00 0.02
#> CTCAGCTGAACCTG-1     2  0.4977   0.000156 0.00 0.54 0.00 0.46
#> CTCCTACTGCCTTC-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> CTCGAAGATTAGGC-1     2  0.2647   0.762737 0.00 0.88 0.00 0.12
#> CTCTAATGTCCAAG-1     2  0.4977   0.117963 0.00 0.54 0.46 0.00
#> CTGCCAACTAACCG-1     2  0.8194   0.239739 0.02 0.46 0.26 0.26
#> CTGGCACTCAAGCT-1     4  0.4790   0.468801 0.00 0.38 0.00 0.62
#> CTGTGAGACGAACT-1     3  0.1211   0.823836 0.00 0.04 0.96 0.00
#> CTGTGAGACTGTAG-1     2  0.3975   0.635021 0.00 0.76 0.00 0.24
#> CTTACAACTCCCGT-1     3  0.4841   0.719625 0.08 0.00 0.78 0.14
#> CTTGATTGATCTTC-1     4  0.1211   0.802305 0.00 0.04 0.00 0.96
#> GAAAGATGCTTCGC-1     4  0.3801   0.748798 0.00 0.22 0.00 0.78
#> GAAAGTGACCACAA-1     2  0.0000   0.799437 0.00 1.00 0.00 0.00
#> GAAATACTACCAAC-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> GAACTGTGCCAGTA-1     3  0.1637   0.820002 0.00 0.06 0.94 0.00
#> GAAGGGTGCTTAGG-1     2  0.1211   0.793859 0.00 0.96 0.00 0.04
#> GAAGTCACCCTCGT-1     4  0.2411   0.802863 0.04 0.04 0.00 0.92
#> GACCAAACGACTAC-1     3  0.4778   0.788572 0.04 0.08 0.82 0.06
#> GACCAAACGTATCG-1     3  0.0707   0.822240 0.00 0.00 0.98 0.02
#> GACGTCCTCTCAAG-1     2  0.4292   0.744941 0.00 0.82 0.08 0.10
#> GACTCCTGTTGGTG-1     2  0.4522   0.480023 0.00 0.68 0.00 0.32
#> GACTGAACCAATCG-1     4  0.2011   0.812507 0.00 0.08 0.00 0.92
#> GAGCGCACGCGTAT-1     3  0.1211   0.819638 0.04 0.00 0.96 0.00
#> GAGCGCTGTCTTAC-1     1  0.8453  -0.250131 0.36 0.32 0.02 0.30
#> GAGGTACTACTCAG-1     4  0.5486   0.647771 0.00 0.08 0.20 0.72
#> GAGGTTTGTAAGCC-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> GAGTTGTGCATGGT-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> GAGTTGTGGCGAGA-1     4  0.1913   0.798854 0.04 0.02 0.00 0.94
#> GATAAGGAGAAACA-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> GATAAGGATTCACT-1     2  0.2921   0.747554 0.00 0.86 0.00 0.14
#> GATACTCTTGACTG-1     4  0.1211   0.807399 0.00 0.04 0.00 0.96
#> GATAGAGATCACGA-1     2  0.2921   0.744888 0.00 0.86 0.00 0.14
#> GATATATGTGGAGG-1     4  0.4977   0.211950 0.00 0.46 0.00 0.54
#> GATATCCTCCCGTT-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> GATCCGCTGGTCAT-1     2  0.1637   0.786438 0.00 0.94 0.06 0.00
#> GATCGATGTAAGGA-1     2  0.5915   0.220395 0.00 0.56 0.04 0.40
#> GATCTTACGAATAG-1     1  0.0707   0.920038 0.98 0.00 0.00 0.02
#> GATCTTACGAGATA-1     2  0.6510   0.173020 0.00 0.54 0.08 0.38
#> GATGCCCTGGCAAG-1     4  0.4977   0.207173 0.00 0.46 0.00 0.54
#> GATTTAGATTCGTT-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> GATTTGCTAACGGG-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> GCAACCCTCCTCGT-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> GCAATCGATCCTTA-1     2  0.2706   0.777921 0.00 0.90 0.02 0.08
#> GCACAATGGTGCAT-1     4  0.4406   0.606876 0.00 0.30 0.00 0.70
#> GCACCACTCATGAC-1     2  0.2647   0.759173 0.00 0.88 0.00 0.12
#> GCACCACTGTTTGG-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> GCACCACTTTCGGA-1     2  0.2647   0.752341 0.00 0.88 0.12 0.00
#> GCCACGGAGGCGAA-1     1  0.1411   0.908853 0.96 0.00 0.02 0.02
#> GCCGTACTGGCAAG-1     1  0.4790   0.360589 0.62 0.00 0.38 0.00
#> GCCTGACTCTCAAG-1     4  0.2345   0.811299 0.00 0.10 0.00 0.90
#> GCGAGCACTTGCTT-1     2  0.2706   0.783748 0.00 0.90 0.02 0.08
#> GCGCACGACTTTAC-1     4  0.3400   0.780056 0.00 0.18 0.00 0.82
#> GCGGCAACTGTCGA-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> GCTACCTGAGAAGT-1     2  0.5327   0.634604 0.00 0.72 0.22 0.06
#> GCTAGATGAGCTCA-1     2  0.2647   0.762292 0.00 0.88 0.12 0.00
#> GCTCGACTCTAGTG-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> GCTGATGAGGTATC-1     4  0.1211   0.802305 0.00 0.04 0.00 0.96
#> GCTTAACTACAGTC-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> GCTTAACTTAGACC-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> GGAACACTCACTTT-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> GGAACTTGCTCCAC-1     2  0.0707   0.797265 0.00 0.98 0.00 0.02
#> GGAAGGACATCGGT-1     4  0.3172   0.784450 0.00 0.16 0.00 0.84
#> GGAATCTGCTTGTT-1     3  0.4522   0.542802 0.00 0.32 0.68 0.00
#> GGACCGTGCTTACT-1     4  0.1913   0.795738 0.04 0.02 0.00 0.94
#> GGACCTCTGTAAGA-1     3  0.0707   0.820188 0.00 0.00 0.98 0.02
#> GGACGAGAGTGTCA-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> GGAGGATGGTTGAC-1     1  0.5606   0.009154 0.50 0.00 0.48 0.02
#> GGAGGATGTCAGTG-1     3  0.0707   0.820188 0.00 0.00 0.98 0.02
#> GGATGTACGTCTTT-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> GGCAAGGACTTGGA-1     2  0.1211   0.797877 0.00 0.96 0.00 0.04
#> GGCCCAGAAAGTAG-1     2  0.2345   0.780616 0.00 0.90 0.00 0.10
#> GGCTCACTACTCAG-1     2  0.0000   0.799437 0.00 1.00 0.00 0.00
#> GGGAACGAGTGTCA-1     3  0.4797   0.630056 0.26 0.00 0.72 0.02
#> GGGAAGTGTTGAGC-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> GGGACCTGACCCTC-1     2  0.1637   0.795363 0.00 0.94 0.00 0.06
#> GGGATGGATGGTTG-1     3  0.0707   0.825580 0.00 0.02 0.98 0.00
#> GGGCAAGATGCATG-1     1  0.0707   0.917983 0.98 0.00 0.02 0.00
#> GGGCCAACTACGCA-1     3  0.0707   0.820188 0.00 0.00 0.98 0.02
#> GGTACTGAACTCTT-1     3  0.0707   0.825579 0.00 0.02 0.98 0.00
#> GGTAGTACACTAGC-1     4  0.2345   0.768008 0.00 0.10 0.00 0.90
#> GGTAGTACGCCATA-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> GGTATCGAGACAAA-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> GGTCTAGAGAAACA-1     4  0.4713   0.476945 0.00 0.36 0.00 0.64
#> GGTGATACGACTAC-1     2  0.1211   0.793859 0.00 0.96 0.00 0.04
#> GGTGGAGATCTCTA-1     1  0.3335   0.825319 0.86 0.00 0.02 0.12
#> GTAAGCTGGTACCA-1     4  0.1211   0.807399 0.00 0.04 0.00 0.96
#> GTAATAACCTTCTA-1     4  0.4581   0.759481 0.00 0.08 0.12 0.80
#> GTAGACTGAGATGA-1     3  0.2011   0.803609 0.08 0.00 0.92 0.00
#> GTAGCAACAGTCGT-1     4  0.3400   0.772484 0.00 0.18 0.00 0.82
#> GTAGCAACGGTAGG-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> GTAGCATGTAAGCC-1     1  0.2011   0.872618 0.92 0.00 0.08 0.00
#> GTAGGTACACGGGA-1     2  0.1637   0.790902 0.00 0.94 0.00 0.06
#> GTAGTGTGAGGCGA-1     1  0.4855   0.299716 0.60 0.00 0.40 0.00
#> GTATCACTGGTAGG-1     2  0.0707   0.801515 0.00 0.98 0.00 0.02
#> GTCAACGAGTGTAC-1     3  0.4755   0.709904 0.00 0.20 0.76 0.04
#> GTCTAGGAGCTTCC-1     2  0.0707   0.799670 0.00 0.98 0.00 0.02
#> GTGATTCTCTCTCG-1     4  0.4277   0.674758 0.00 0.28 0.00 0.72
#> GTTTAAGACCATGA-1     2  0.0707   0.797265 0.00 0.98 0.00 0.02
#> TAACACCTTCGCTC-1     2  0.0707   0.797265 0.00 0.98 0.00 0.02
#> TAACGTCTCAACCA-1     4  0.7684   0.486407 0.06 0.10 0.26 0.58
#> TAACTCACGAGGAC-1     3  0.3801   0.700473 0.22 0.00 0.78 0.00
#> TAACTCACGTATCG-1     2  0.0000   0.799437 0.00 1.00 0.00 0.00
#> TAAGAACTGTGTCA-1     4  0.1913   0.806317 0.02 0.04 0.00 0.94
#> TAAGATACGGTTCA-1     3  0.6005   0.111188 0.46 0.00 0.50 0.04
#> TAAGCGTGAGGTTC-1     2  0.2335   0.791114 0.00 0.92 0.02 0.06
#> TACAATGAAAACAG-1     3  0.3198   0.801027 0.00 0.08 0.88 0.04
#> TACCATTGCGGGAA-1     1  0.2611   0.883345 0.92 0.02 0.02 0.04
#> TACCATTGGGGATG-1     4  0.3610   0.651381 0.20 0.00 0.00 0.80
#> TACCATTGTGAGGG-1     4  0.2011   0.812627 0.00 0.08 0.00 0.92
#> TACGTTACCAAGCT-1     3  0.4522   0.550312 0.32 0.00 0.68 0.00
#> TACTAAGATGATGC-1     3  0.0707   0.825771 0.00 0.02 0.98 0.00
#> TACTACTGAACCTG-1     2  0.4994  -0.017339 0.00 0.52 0.00 0.48
#> TACTCAACGGTCTA-1     2  0.1637   0.792012 0.00 0.94 0.00 0.06
#> TAGAAACTGCTTCC-1     4  0.1637   0.812872 0.00 0.06 0.00 0.94
#> TAGGCTGATGCCTC-1     4  0.4406   0.622848 0.00 0.30 0.00 0.70
#> TAGGTTCTTGCTGA-1     2  0.3172   0.728486 0.00 0.84 0.16 0.00
#> TAGTACCTAAGAAC-1     2  0.3525   0.765767 0.00 0.86 0.04 0.10
#> TATAAGTGTATCGG-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> TATCCAACCAGCTA-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> TATCGTACATTCCT-1     2  0.4079   0.724695 0.00 0.80 0.02 0.18
#> TATGTGCTCCGATA-1     2  0.3975   0.640262 0.00 0.76 0.24 0.00
#> TATTGCTGAAGAAC-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> TATTTCCTATTGGC-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> TCAAGGACGGTGTT-1     4  0.2011   0.812433 0.00 0.08 0.00 0.92
#> TCACAACTTTGCTT-1     1  0.1637   0.892492 0.94 0.00 0.00 0.06
#> TCAGTTACCTACGA-1     3  0.2345   0.804005 0.00 0.10 0.90 0.00
#> TCCACTCTGAGCTT-1     2  0.5594   0.070168 0.00 0.52 0.46 0.02
#> TCCCATCTCAAAGA-1     3  0.0707   0.824444 0.00 0.02 0.98 0.00
#> TCCCGATGCCTGAA-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> TCCGAAGACAATCG-1     1  0.1637   0.889394 0.94 0.00 0.06 0.00
#> TCGACGCTTCTATC-1     2  0.0707   0.797265 0.00 0.98 0.00 0.02
#> TCGATTTGATGCCA-1     4  0.1637   0.810687 0.00 0.06 0.00 0.94
#> TCGATTTGCCTACC-1     2  0.0707   0.797265 0.00 0.98 0.00 0.02
#> TCTAAGCTTGTTCT-1     2  0.4977  -0.001777 0.00 0.54 0.00 0.46
#> TCTAGACTTAGAAG-1     1  0.0707   0.918344 0.98 0.00 0.02 0.00
#> TCTATGTGAAGAGT-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> TCTTACGAACCTGA-1     3  0.5173   0.514081 0.00 0.32 0.66 0.02
#> TGAAATTGGTGAGG-1     2  0.0000   0.799437 0.00 1.00 0.00 0.00
#> TGACGATGCAAAGA-1     4  0.4522   0.601925 0.00 0.32 0.00 0.68
#> TGACTGGAAGAGAT-1     1  0.1211   0.905279 0.96 0.00 0.04 0.00
#> TGAGCTGACTGGAT-1     3  0.7707   0.185671 0.00 0.32 0.44 0.24
#> TGAGCTGATGCTAG-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> TGAGGACTCTCATT-1     2  0.3335   0.749707 0.00 0.86 0.12 0.02
#> TGATACCTCACTAG-1     4  0.1411   0.801228 0.02 0.02 0.00 0.96
#> TGCAAGTGGGTAGG-1     4  0.2647   0.804448 0.00 0.12 0.00 0.88
#> TGCCAAGAGCAGTT-1     4  0.3975   0.629111 0.00 0.24 0.00 0.76
#> TGCGATGAGTGCTA-1     3  0.0707   0.820188 0.00 0.00 0.98 0.02
#> TGCGCACTCTTGAG-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> TGCGTAGAATAAGG-1     1  0.3606   0.796813 0.84 0.00 0.14 0.02
#> TGCTATACGGTTCA-1     2  0.4977   0.159612 0.00 0.54 0.00 0.46
#> TGGACCCTACACTG-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> TGGAGACTATCAGC-1     2  0.0000   0.799437 0.00 1.00 0.00 0.00
#> TGGAGGGACGGAGA-1     1  0.5106   0.632314 0.72 0.00 0.24 0.04
#> TGGGTATGTTTGGG-1     1  0.5456   0.640135 0.70 0.02 0.02 0.26
#> TGGTAGTGCACTGA-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> TGGTTACTGACGTT-1     2  0.2345   0.775060 0.00 0.90 0.00 0.10
#> TGTTAAGACAAAGA-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> TGTTAAGATAAGGA-1     3  0.0000   0.821892 0.00 0.00 1.00 0.00
#> TGTTACACGACTAC-1     1  0.1411   0.908853 0.96 0.00 0.02 0.02
#> TTACCATGAATCGC-1     3  0.0000   0.821892 0.00 0.00 1.00 0.00
#> TTACGACTTGACAC-1     4  0.2647   0.805355 0.00 0.12 0.00 0.88
#> TTACTCGAAGAATG-1     2  0.1211   0.798120 0.00 0.96 0.00 0.04
#> TTAGACCTCCTTTA-1     3  0.7886   0.396450 0.04 0.14 0.54 0.28
#> TTAGGTCTACTTTC-1     1  0.2647   0.844661 0.88 0.00 0.00 0.12
#> TTCAACACCCCAAA-1     4  0.5456   0.659773 0.02 0.26 0.02 0.70
#> TTCAAGCTAAGAAC-1     3  0.5594   0.186807 0.00 0.46 0.52 0.02
#> TTCACAACGTCTGA-1     1  0.0707   0.920038 0.98 0.00 0.00 0.02
#> TTCAGTACTCCTAT-1     3  0.3611   0.782433 0.06 0.00 0.86 0.08
#> TTCAGTTGTCCTTA-1     2  0.4977   0.159612 0.00 0.54 0.00 0.46
#> TTCATCGAGGTGGA-1     4  0.2921   0.801567 0.00 0.14 0.00 0.86
#> TTCATTCTATGTCG-1     3  0.6350   0.473915 0.02 0.34 0.60 0.04
#> TTCCAAACCTATGG-1     1  0.3801   0.702561 0.78 0.00 0.22 0.00
#> TTCCATGACGAGAG-1     4  0.6382   0.432076 0.00 0.34 0.08 0.58
#> TTCCCACTTGTCTT-1     2  0.2011   0.787549 0.00 0.92 0.00 0.08
#> TTCGGAGAATGCCA-1     3  0.4406   0.578210 0.30 0.00 0.70 0.00
#> TTCTAGTGCATGAC-1     4  0.4907   0.364538 0.00 0.42 0.00 0.58
#> TTGAGGACAGAACA-1     4  0.4642   0.711975 0.00 0.24 0.02 0.74
#> TTGCATTGCTAAGC-1     3  0.4277   0.634027 0.00 0.28 0.72 0.00
#> TTGGAGACGCTATG-1     4  0.6605   0.161873 0.00 0.44 0.08 0.48
#> TTTAGCTGGATACC-1     4  0.1211   0.807399 0.00 0.04 0.00 0.96
#> TTTAGCTGTACTCT-1     2  0.4713   0.396917 0.00 0.64 0.00 0.36
#> TTTAGGCTCCTTTA-1     4  0.4406   0.511664 0.30 0.00 0.00 0.70
#> TTTCAGTGTCTATC-1     1  0.0000   0.929036 1.00 0.00 0.00 0.00
#> TTTCGAACTCTCAT-1     2  0.0000   0.799437 0.00 1.00 0.00 0.00

Heatmaps for the consensus matrix. It visualizes the probability of two samples to be in a same group.

consensus_heatmap(res, k = 2)

plot of chunk tab-node-021-consensus-heatmap-1

consensus_heatmap(res, k = 3)

plot of chunk tab-node-021-consensus-heatmap-2

consensus_heatmap(res, k = 4)

plot of chunk tab-node-021-consensus-heatmap-3

Heatmaps for the membership of samples in all partitions to see how consistent they are:

membership_heatmap(res, k = 2)

plot of chunk tab-node-021-membership-heatmap-1

membership_heatmap(res, k = 3)

plot of chunk tab-node-021-membership-heatmap-2

membership_heatmap(res, k = 4)

plot of chunk tab-node-021-membership-heatmap-3

As soon as the classes for columns are determined, the signatures that are significantly different between subgroups can be looked for. Following are the heatmaps for signatures.

Signature heatmaps where rows are scaled:

get_signatures(res, k = 2)

plot of chunk tab-node-021-get-signatures-1

get_signatures(res, k = 3)

plot of chunk tab-node-021-get-signatures-2

get_signatures(res, k = 4)

plot of chunk tab-node-021-get-signatures-3

Signature heatmaps where rows are not scaled:

get_signatures(res, k = 2, scale_rows = FALSE)

plot of chunk tab-node-021-get-signatures-no-scale-1

get_signatures(res, k = 3, scale_rows = FALSE)

plot of chunk tab-node-021-get-signatures-no-scale-2

get_signatures(res, k = 4, scale_rows = FALSE)

plot of chunk tab-node-021-get-signatures-no-scale-3

Compare the overlap of signatures from different k:

compare_signatures(res)

plot of chunk node-021-signature_compare

get_signature() returns a data frame invisibly. To get the list of signatures, the function call should be assigned to a variable explicitly. In following code, if plot argument is set to FALSE, no heatmap is plotted while only the differential analysis is performed.

# code only for demonstration
tb = get_signature(res, k = ..., plot = FALSE)

An example of the output of tb is:

#>   which_row         fdr    mean_1    mean_2 scaled_mean_1 scaled_mean_2 km
#> 1        38 0.042760348  8.373488  9.131774    -0.5533452     0.5164555  1
#> 2        40 0.018707592  7.106213  8.469186    -0.6173731     0.5762149  1
#> 3        55 0.019134737 10.221463 11.207825    -0.6159697     0.5749050  1
#> 4        59 0.006059896  5.921854  7.869574    -0.6899429     0.6439467  1
#> 5        60 0.018055526  8.928898 10.211722    -0.6204761     0.5791110  1
#> 6        98 0.009384629 15.714769 14.887706     0.6635654    -0.6193277  2
...

The columns in tb are:

  1. which_row: row indices corresponding to the input matrix.
  2. fdr: FDR for the differential test.
  3. mean_x: The mean value in group x.
  4. scaled_mean_x: The mean value in group x after rows are scaled.
  5. km: Row groups if k-means clustering is applied to rows (which is done by automatically selecting number of clusters).

If there are too many signatures, top_signatures = ... can be set to only show the signatures with the highest FDRs:

# code only for demonstration
# e.g. to show the top 500 most significant rows
tb = get_signature(res, k = ..., top_signatures = 500)

If the signatures are defined as these which are uniquely high in current group, diff_method argument can be set to "uniquely_high_in_one_group":

# code only for demonstration
tb = get_signature(res, k = ..., diff_method = "uniquely_high_in_one_group")

UMAP plot which shows how samples are separated.

dimension_reduction(res, k = 2, method = "UMAP")

plot of chunk tab-node-021-dimension-reduction-1

dimension_reduction(res, k = 3, method = "UMAP")

plot of chunk tab-node-021-dimension-reduction-2

dimension_reduction(res, k = 4, method = "UMAP")

plot of chunk tab-node-021-dimension-reduction-3

Following heatmap shows how subgroups are split when increasing k:

collect_classes(res)

plot of chunk node-021-collect-classes

Test correlation between subgroups and known annotations. If the known annotation is numeric, one-way ANOVA test is applied, and if the known annotation is discrete, chi-squared contingency table test is applied.

test_to_known_factors(res)
#>             n_sample Seurat_class(p-value) k
#> ATC:skmeans      352               0.00903 2
#> ATC:skmeans      342               0.00536 3
#> ATC:skmeans      319               0.03456 4

If matrix rows can be associated to genes, consider to use functional_enrichment(res, ...) to perform function enrichment for the signature genes. See this vignette for more detailed explanations.


Node022

Parent node: Node02. Child nodes: Node0211-leaf , Node0212-leaf , Node0221-leaf , Node0222-leaf .

The object with results only for a single top-value method and a single partitioning method can be extracted as:

res = res_rh["022"]

A summary of res and all the functions that can be applied to it:

res
#> A 'ConsensusPartition' object with k = 2, 3, 4.
#>   On a matrix with 3479 rows and 304 columns.
#>   Top rows (344) are extracted by 'ATC' method.
#>   Subgroups are detected by 'skmeans' method.
#>   Performed in total 150 partitions by row resampling.
#>   Best k for subgroups seems to be 2.
#> 
#> Following methods can be applied to this 'ConsensusPartition' object:
#>  [1] "cola_report"             "collect_classes"         "collect_plots"          
#>  [4] "collect_stats"           "colnames"                "compare_partitions"     
#>  [7] "compare_signatures"      "consensus_heatmap"       "dimension_reduction"    
#> [10] "functional_enrichment"   "get_anno_col"            "get_anno"               
#> [13] "get_classes"             "get_consensus"           "get_matrix"             
#> [16] "get_membership"          "get_param"               "get_signatures"         
#> [19] "get_stats"               "is_best_k"               "is_stable_k"            
#> [22] "membership_heatmap"      "ncol"                    "nrow"                   
#> [25] "plot_ecdf"               "predict_classes"         "rownames"               
#> [28] "select_partition_number" "show"                    "suggest_best_k"         
#> [31] "test_to_known_factors"   "top_rows_heatmap"

collect_plots() function collects all the plots made from res for all k (number of subgroups) into one single page to provide an easy and fast comparison between different k.

collect_plots(res)

plot of chunk node-022-collect-plots

The plots are:

All the plots in panels can be made by individual functions and they are plotted later in this section.

select_partition_number() produces several plots showing different statistics for choosing “optimized” k. There are following statistics:

The detailed explanations of these statistics can be found in the cola vignette.

Generally speaking, higher 1-PAC score, higher mean silhouette score or higher concordance corresponds to better partition. Rand index and Jaccard index measure how similar the current partition is compared to partition with k-1. If they are too similar, we won't accept k is better than k-1.

select_partition_number(res)

plot of chunk node-022-select-partition-number

The numeric values for all these statistics can be obtained by get_stats().

get_stats(res)
#>   k 1-PAC mean_silhouette concordance area_increased  Rand Jaccard
#> 2 2 1.000           0.977       0.991         0.5019 0.499   0.499
#> 3 3 0.899           0.914       0.959         0.2738 0.844   0.692
#> 4 4 0.793           0.772       0.894         0.0895 0.923   0.794

suggest_best_k() suggests the best \(k\) based on these statistics. The rules are as follows:

suggest_best_k(res)
#> [1] 2

Following is the table of the partitions (You need to click the show/hide code output link to see it). The membership matrix (columns with name p*) is inferred by clue::cl_consensus() function with the SE method. Basically the value in the membership matrix represents the probability to belong to a certain group. The finall subgroup label for an item is determined with the group with highest probability it belongs to.

In get_classes() function, the entropy is calculated from the membership matrix and the silhouette score is calculated from the consensus matrix.

show/hide code output

cbind(get_classes(res, k = 2), get_membership(res, k = 2))
#>                  class entropy silhouette   p1   p2
#> AAACCGTGCTTCCG-1     2   0.000      0.990 0.00 1.00
#> AAAGCAGATATCGG-1     2   0.000      0.990 0.00 1.00
#> AAATCAACCCTATT-1     2   0.000      0.990 0.00 1.00
#> AAATCATGACCACA-1     1   0.000      0.991 1.00 0.00
#> AAATGTTGTGGCAT-1     2   0.000      0.990 0.00 1.00
#> AAATTCGAGCTGAT-1     1   0.000      0.991 1.00 0.00
#> AACACGTGTACGAC-1     1   0.000      0.991 1.00 0.00
#> AACATTGATGGGAG-1     1   0.000      0.991 1.00 0.00
#> AACCAGTGATACCG-1     1   0.000      0.991 1.00 0.00
#> AACCGCCTCTACGA-1     2   0.000      0.990 0.00 1.00
#> AACCTACTGTGAGG-1     2   0.000      0.990 0.00 1.00
#> AACCTTACTAACGC-1     1   0.000      0.991 1.00 0.00
#> AACCTTTGTACGCA-1     1   0.000      0.991 1.00 0.00
#> AAGATGGAGAACTC-1     2   0.000      0.990 0.00 1.00
#> AAGATGGAGATAAG-1     2   0.000      0.990 0.00 1.00
#> AAGATTACAGATCC-1     2   0.000      0.990 0.00 1.00
#> AAGCCATGAACTGC-1     2   0.000      0.990 0.00 1.00
#> AAGCGACTCCTCAC-1     2   0.000      0.990 0.00 1.00
#> AAGCGACTTTGACG-1     1   0.000      0.991 1.00 0.00
#> AAGTTCCTCATTCT-1     1   0.881      0.571 0.70 0.30
#> AATCTCACAGCCTA-1     2   0.000      0.990 0.00 1.00
#> AATGATACGGTCAT-1     2   0.000      0.990 0.00 1.00
#> AATTACGAATTCCT-1     2   0.000      0.990 0.00 1.00
#> AATTGATGTCGCAA-1     1   0.000      0.991 1.00 0.00
#> ACAAATTGATTCTC-1     1   0.000      0.991 1.00 0.00
#> ACAAGAGAAGTCGT-1     2   0.000      0.990 0.00 1.00
#> ACAGCAACCTCAAG-1     1   0.000      0.991 1.00 0.00
#> ACCAGTGAATACCG-1     1   0.000      0.991 1.00 0.00
#> ACCCAAGAATTCCT-1     1   0.000      0.991 1.00 0.00
#> ACCCACTGTCGTAG-1     2   0.000      0.990 0.00 1.00
#> ACCCTCGATAAGGA-1     2   0.000      0.990 0.00 1.00
#> ACCTATTGTGCCCT-1     1   0.000      0.991 1.00 0.00
#> ACCTTTGACTCCCA-1     2   0.000      0.990 0.00 1.00
#> ACCTTTGAGGAACG-1     2   0.000      0.990 0.00 1.00
#> ACCTTTGAGGAAGC-1     2   0.000      0.990 0.00 1.00
#> ACGAACTGGCTATG-1     1   0.000      0.991 1.00 0.00
#> ACGACCCTATCTCT-1     2   0.000      0.990 0.00 1.00
#> ACGAGGGACAGGAG-1     2   0.000      0.990 0.00 1.00
#> ACGCCTTGCTCCCA-1     1   0.000      0.991 1.00 0.00
#> ACGGAACTGTCGTA-1     1   0.000      0.991 1.00 0.00
#> ACGTCCTGTGAACC-1     2   0.000      0.990 0.00 1.00
#> ACGTGATGCCATGA-1     2   0.000      0.990 0.00 1.00
#> ACGTGATGTAACCG-1     1   0.000      0.991 1.00 0.00
#> ACGTTGGATCAGGT-1     2   0.000      0.990 0.00 1.00
#> ACTGAGACCCATAG-1     1   0.000      0.991 1.00 0.00
#> ACTTAGCTGCGTAT-1     1   0.000      0.991 1.00 0.00
#> ACTTGGGATTGACG-1     2   0.000      0.990 0.00 1.00
#> ACTTTGTGGATAGA-1     2   0.000      0.990 0.00 1.00
#> AGACGTACTCGTGA-1     1   0.000      0.991 1.00 0.00
#> AGAGCGGAGGCAAG-1     2   0.000      0.990 0.00 1.00
#> AGAGTCTGGTCGTA-1     1   0.000      0.991 1.00 0.00
#> AGATATTGGCCAAT-1     2   0.000      0.990 0.00 1.00
#> AGATTAACGTTCTT-1     1   0.000      0.991 1.00 0.00
#> AGCACTGATGCTTT-1     2   0.000      0.990 0.00 1.00
#> AGCATCGATAACCG-1     2   0.000      0.990 0.00 1.00
#> AGCCAATGGGGAGT-1     1   0.000      0.991 1.00 0.00
#> AGCCTCACTGTCAG-1     2   0.000      0.990 0.00 1.00
#> AGCGTAACTGAGAA-1     2   0.000      0.990 0.00 1.00
#> AGCTGAACCATACG-1     1   0.000      0.991 1.00 0.00
#> AGGAACCTCTTAGG-1     1   0.000      0.991 1.00 0.00
#> AGGTCTGATTCTCA-1     1   0.995      0.143 0.54 0.46
#> AGTAGGCTTGCCTC-1     1   0.000      0.991 1.00 0.00
#> AGTATAACTTGTCT-1     1   0.000      0.991 1.00 0.00
#> AGTCTACTTGCATG-1     1   0.000      0.991 1.00 0.00
#> AGTGACTGCAACTG-1     1   0.000      0.991 1.00 0.00
#> ATACCACTCTAAGC-1     2   0.000      0.990 0.00 1.00
#> ATACCGGAATGCTG-1     2   0.000      0.990 0.00 1.00
#> ATACTCTGCTTCGC-1     2   0.000      0.990 0.00 1.00
#> ATAGGAGAAACAGA-1     2   0.000      0.990 0.00 1.00
#> ATAGTTGACCCTCA-1     1   0.000      0.991 1.00 0.00
#> ATCAAATGGGTAAA-1     1   0.000      0.991 1.00 0.00
#> ATCCAGGACGCTAA-1     1   0.000      0.991 1.00 0.00
#> ATCCATACTTCATC-1     1   0.000      0.991 1.00 0.00
#> ATCGACGAAACTGC-1     2   0.000      0.990 0.00 1.00
#> ATCGCAGAATCTCT-1     1   0.000      0.991 1.00 0.00
#> ATCGTTTGCCTACC-1     2   0.000      0.990 0.00 1.00
#> ATCTGGGAAACCAC-1     2   0.000      0.990 0.00 1.00
#> ATCTGGGAAGTGTC-1     2   0.000      0.990 0.00 1.00
#> ATCTGTTGCCTTCG-1     2   0.000      0.990 0.00 1.00
#> ATGACGTGATCGGT-1     1   0.000      0.991 1.00 0.00
#> ATGATATGTTGTCT-1     2   0.000      0.990 0.00 1.00
#> ATGCACGATTGGTG-1     2   0.000      0.990 0.00 1.00
#> ATGCCGCTTGAACC-1     2   0.000      0.990 0.00 1.00
#> ATGCGATGCTATGG-1     2   0.000      0.990 0.00 1.00
#> ATGTAAACGGGATG-1     2   0.000      0.990 0.00 1.00
#> ATTACCTGGAGGAC-1     1   0.000      0.991 1.00 0.00
#> ATTCGACTTTTGTC-1     1   0.000      0.991 1.00 0.00
#> ATTGCACTGAGAGC-1     1   0.000      0.991 1.00 0.00
#> ATTGCACTTGCTTT-1     1   0.000      0.991 1.00 0.00
#> ATTGTAGATTCCCG-1     2   0.000      0.990 0.00 1.00
#> ATTTAGGAACCATG-1     1   0.000      0.991 1.00 0.00
#> ATTTCTCTACTTTC-1     1   0.000      0.991 1.00 0.00
#> ATTTCTCTCACTTT-1     1   0.000      0.991 1.00 0.00
#> CAACCAGAGTTCAG-1     2   0.000      0.990 0.00 1.00
#> CAACGATGCGCAAT-1     1   0.000      0.991 1.00 0.00
#> CAACGTGACTCCAC-1     2   0.000      0.990 0.00 1.00
#> CAAGAAGACGTCTC-1     2   0.000      0.990 0.00 1.00
#> CAAGCTGACCATAG-1     1   0.000      0.991 1.00 0.00
#> CAATTCTGCTTGTT-1     2   0.000      0.990 0.00 1.00
#> CAATTCTGGCGTAT-1     1   0.000      0.991 1.00 0.00
#> CACAGCCTTGCCAA-1     1   0.000      0.991 1.00 0.00
#> CACTGCTGAGACTC-1     1   0.000      0.991 1.00 0.00
#> CAGACCCTAAGGTA-1     1   0.000      0.991 1.00 0.00
#> CAGCACCTGTAGGG-1     2   0.000      0.990 0.00 1.00
#> CAGCTCTGTCGTAG-1     2   0.000      0.990 0.00 1.00
#> CAGGCCGAATCTCT-1     2   0.795      0.683 0.24 0.76
#> CAGTTGGAAAGAGT-1     2   0.000      0.990 0.00 1.00
#> CATACTTGGGTTAC-1     1   0.000      0.991 1.00 0.00
#> CATCAGGATCCTAT-1     1   0.000      0.991 1.00 0.00
#> CATCAGGATGCACA-1     1   0.141      0.971 0.98 0.02
#> CATCATACCGCATA-1     2   0.000      0.990 0.00 1.00
#> CATCTCCTCGAACT-1     2   0.584      0.835 0.14 0.86
#> CATGCGCTAGTCAC-1     1   0.000      0.991 1.00 0.00
#> CATGCGCTTTGCAG-1     1   0.000      0.991 1.00 0.00
#> CATTGTACTTTGCT-1     1   0.000      0.991 1.00 0.00
#> CCAAAGTGCTACGA-1     2   0.000      0.990 0.00 1.00
#> CCACCATGGACGAG-1     1   0.000      0.991 1.00 0.00
#> CCACTTCTCGGGAA-1     2   0.000      0.990 0.00 1.00
#> CCAGCACTGCGATT-1     1   0.000      0.991 1.00 0.00
#> CCATCGTGCTAGAC-1     1   0.000      0.991 1.00 0.00
#> CCCAACACTTTGTC-1     2   0.000      0.990 0.00 1.00
#> CCCAGACTGCCTTC-1     2   0.529      0.861 0.12 0.88
#> CCCAGACTTTCGCC-1     1   0.000      0.991 1.00 0.00
#> CCCAGTTGCAGTTG-1     2   0.000      0.990 0.00 1.00
#> CCCTTACTAACCAC-1     2   0.000      0.990 0.00 1.00
#> CCGAAAACCTTGTT-1     1   0.141      0.971 0.98 0.02
#> CCGACTACCCAGTA-1     2   0.000      0.990 0.00 1.00
#> CCGATAGAGTTGGT-1     2   0.000      0.990 0.00 1.00
#> CCGCTATGTGCAAC-1     2   0.000      0.990 0.00 1.00
#> CCGTACACGTTGGT-1     2   0.000      0.990 0.00 1.00
#> CCTATAACTGCATG-1     1   0.000      0.991 1.00 0.00
#> CCTCGAACCCGTAA-1     1   0.000      0.991 1.00 0.00
#> CCTTAATGTTCTAC-1     1   0.000      0.991 1.00 0.00
#> CGAGGCACTATGCG-1     2   0.000      0.990 0.00 1.00
#> CGAGTATGTCACCC-1     1   0.000      0.991 1.00 0.00
#> CGATACGAACAGTC-1     2   0.000      0.990 0.00 1.00
#> CGATCAGATGTGAC-1     2   0.000      0.990 0.00 1.00
#> CGCAGGACTTGTCT-1     1   0.000      0.991 1.00 0.00
#> CGCAGGTGCCATAG-1     1   0.000      0.991 1.00 0.00
#> CGCCTAACGAATGA-1     2   0.000      0.990 0.00 1.00
#> CGCTACTGAACAGA-1     2   0.000      0.990 0.00 1.00
#> CGGCACGACTACGA-1     1   0.000      0.991 1.00 0.00
#> CGGCGAACCAGTCA-1     2   0.000      0.990 0.00 1.00
#> CGTAGCCTGTATGC-1     1   0.000      0.991 1.00 0.00
#> CGTGCACTTATGGC-1     2   0.000      0.990 0.00 1.00
#> CGTTAGGATCATTC-1     2   0.000      0.990 0.00 1.00
#> CTAACACTAGTGCT-1     2   0.000      0.990 0.00 1.00
#> CTACGCACACCTAG-1     1   0.000      0.991 1.00 0.00
#> CTACGGCTTTCTTG-1     2   0.000      0.990 0.00 1.00
#> CTAGAGACTTTGGG-1     1   0.000      0.991 1.00 0.00
#> CTAGGTGATGGTTG-1     1   0.000      0.991 1.00 0.00
#> CTATTGACACTGGT-1     2   0.000      0.990 0.00 1.00
#> CTATTGACGGTGAG-1     2   0.242      0.951 0.04 0.96
#> CTCAGGCTCGTTGA-1     1   0.000      0.991 1.00 0.00
#> CTCATTGATGCTTT-1     2   0.402      0.908 0.08 0.92
#> CTCCACGAGAGATA-1     2   0.000      0.990 0.00 1.00
#> CTCCGAACAAGTGA-1     1   0.000      0.991 1.00 0.00
#> CTGAAGTGAAGCCT-1     1   0.000      0.991 1.00 0.00
#> CTGATTTGGTGTTG-1     2   0.000      0.990 0.00 1.00
#> CTGCAGCTGGATTC-1     2   0.990      0.213 0.44 0.56
#> CTGTATACGTACGT-1     2   0.000      0.990 0.00 1.00
#> CTGTGAGACAACCA-1     1   0.000      0.991 1.00 0.00
#> CTTCACCTACCTGA-1     1   0.000      0.991 1.00 0.00
#> GAAACCTGGACTAC-1     1   0.000      0.991 1.00 0.00
#> GAAAGATGCTGATG-1     1   0.000      0.991 1.00 0.00
#> GAAAGTGAAAGTGA-1     2   0.000      0.990 0.00 1.00
#> GAACACACGTGCAT-1     2   0.000      0.990 0.00 1.00
#> GAACAGCTAACTGC-1     1   0.943      0.438 0.64 0.36
#> GAACAGCTCTCAGA-1     1   0.000      0.991 1.00 0.00
#> GAACTGTGACCTGA-1     1   0.000      0.991 1.00 0.00
#> GAAGCGGACCTATT-1     2   0.000      0.990 0.00 1.00
#> GAAGCTACGAATGA-1     2   0.000      0.990 0.00 1.00
#> GAAGGTCTTAAAGG-1     2   0.000      0.990 0.00 1.00
#> GAAGTAGATCCAAG-1     1   0.000      0.991 1.00 0.00
#> GAAGTGCTCCGCTT-1     2   0.000      0.990 0.00 1.00
#> GACAGTACGAGCTT-1     1   0.000      0.991 1.00 0.00
#> GACAGTACTTCGGA-1     1   0.000      0.991 1.00 0.00
#> GACATTCTCCACCT-1     2   0.000      0.990 0.00 1.00
#> GACCTCACGTACGT-1     2   0.000      0.990 0.00 1.00
#> GACGGCACGAGATA-1     2   0.000      0.990 0.00 1.00
#> GAGATAGAAAAAGC-1     2   0.000      0.990 0.00 1.00
#> GAGATCACGACAAA-1     1   0.000      0.991 1.00 0.00
#> GAGCATACTTTGCT-1     1   0.141      0.971 0.98 0.02
#> GAGGTACTTAGCGT-1     2   0.000      0.990 0.00 1.00
#> GAGGTTACTCGTTT-1     2   0.000      0.990 0.00 1.00
#> GAGTTGTGTATGCG-1     1   0.000      0.991 1.00 0.00
#> GATAGCACGAAGGC-1     2   0.000      0.990 0.00 1.00
#> GATATTGACGAGTT-1     1   0.000      0.991 1.00 0.00
#> GATCTTACACCCAA-1     1   0.000      0.991 1.00 0.00
#> GATTCGGACAGGAG-1     2   0.000      0.990 0.00 1.00
#> GATTCGGAGAAGGC-1     1   0.000      0.991 1.00 0.00
#> GATTCTTGATTCGG-1     2   0.000      0.990 0.00 1.00
#> GATTTAGACACTCC-1     1   0.000      0.991 1.00 0.00
#> GCAATCGAGACGTT-1     2   0.000      0.990 0.00 1.00
#> GCACCTTGGGGAGT-1     2   0.000      0.990 0.00 1.00
#> GCACGGTGCTATGG-1     2   0.000      0.990 0.00 1.00
#> GCACTAGACCTTTA-1     1   0.000      0.991 1.00 0.00
#> GCCGACGAACTCTT-1     2   0.000      0.990 0.00 1.00
#> GCCTACACCACTGA-1     1   0.680      0.778 0.82 0.18
#> GCCTAGCTTCTCTA-1     1   0.000      0.991 1.00 0.00
#> GCGTAAACACGGTT-1     2   0.000      0.990 0.00 1.00
#> GCGTAATGCACCAA-1     1   0.000      0.991 1.00 0.00
#> GCGTATGATGAGAA-1     2   0.000      0.990 0.00 1.00
#> GCTCAAGAACCATG-1     2   0.971      0.333 0.40 0.60
#> GCTCAAGAAGTCAC-1     2   0.000      0.990 0.00 1.00
#> GGAACTTGAAGGTA-1     2   0.000      0.990 0.00 1.00
#> GGACCCGAAGCTAC-1     2   0.000      0.990 0.00 1.00
#> GGACCGTGGGAACG-1     2   0.000      0.990 0.00 1.00
#> GGAGCGCTACGCAT-1     2   0.000      0.990 0.00 1.00
#> GGATTTCTTTGTCT-1     2   0.000      0.990 0.00 1.00
#> GGCACGTGGCTTAG-1     1   0.000      0.991 1.00 0.00
#> GGCGCATGCCTAAG-1     1   0.000      0.991 1.00 0.00
#> GGGAACGAAGCTCA-1     1   0.000      0.991 1.00 0.00
#> GGGCACACGGTGAG-1     1   0.000      0.991 1.00 0.00
#> GGGCCAACCTTGGA-1     2   0.000      0.990 0.00 1.00
#> GGTCTAGATAGCGT-1     2   0.000      0.990 0.00 1.00
#> GTAACGTGACCTCC-1     2   0.000      0.990 0.00 1.00
#> GTACCCTGACAGTC-1     1   0.000      0.991 1.00 0.00
#> GTAGCTGAAGCTAC-1     1   0.000      0.991 1.00 0.00
#> GTCCACTGGGTACT-1     1   0.000      0.991 1.00 0.00
#> GTCCCATGTGGTGT-1     2   0.000      0.990 0.00 1.00
#> GTCGAATGAAGGCG-1     2   0.000      0.990 0.00 1.00
#> GTCTAACTGGTCTA-1     1   0.000      0.991 1.00 0.00
#> GTGGATTGCACTAG-1     1   0.000      0.991 1.00 0.00
#> GTTAACCTTGCTTT-1     2   0.000      0.990 0.00 1.00
#> GTTAGGTGCCAGTA-1     2   0.000      0.990 0.00 1.00
#> GTTAGGTGCCCAAA-1     1   0.000      0.991 1.00 0.00
#> GTTGAGTGGTCTTT-1     2   0.000      0.990 0.00 1.00
#> GTTGGATGTTTACC-1     1   0.000      0.991 1.00 0.00
#> GTTGTACTATTCCT-1     2   0.000      0.990 0.00 1.00
#> TAACACCTTCGTAG-1     2   0.000      0.990 0.00 1.00
#> TAAGCGTGGACAAA-1     2   0.000      0.990 0.00 1.00
#> TAAGCGTGTGCTCC-1     1   0.000      0.991 1.00 0.00
#> TAAGGCTGTCTCGC-1     2   0.000      0.990 0.00 1.00
#> TAATGTGACTGCAA-1     2   0.000      0.990 0.00 1.00
#> TACATCACCTGTTT-1     1   0.000      0.991 1.00 0.00
#> TACATCACTGAACC-1     1   0.000      0.991 1.00 0.00
#> TACGAGTGATGCTG-1     2   0.000      0.990 0.00 1.00
#> TACGATCTCACTGA-1     2   0.000      0.990 0.00 1.00
#> TACGCCACTCCCAC-1     1   0.000      0.991 1.00 0.00
#> TAGCATCTGCTGTA-1     1   0.000      0.991 1.00 0.00
#> TAGCCGCTTTCCAT-1     2   0.000      0.990 0.00 1.00
#> TAGGTTCTTCTTAC-1     1   0.000      0.991 1.00 0.00
#> TATAAGACAGCTCA-1     1   0.000      0.991 1.00 0.00
#> TATAAGTGACACCA-1     1   0.000      0.991 1.00 0.00
#> TATAAGTGTGGTGT-1     1   0.000      0.991 1.00 0.00
#> TATAGATGTTCCGC-1     1   0.000      0.991 1.00 0.00
#> TATCGACTCGATAC-1     1   0.000      0.991 1.00 0.00
#> TATGAATGTTTGCT-1     1   0.000      0.991 1.00 0.00
#> TATGTCACTAACCG-1     2   0.000      0.990 0.00 1.00
#> TCAATCACAGTCGT-1     1   0.000      0.991 1.00 0.00
#> TCACCCGAGACGGA-1     2   0.000      0.990 0.00 1.00
#> TCACCGTGCTCGCT-1     1   0.000      0.991 1.00 0.00
#> TCACCTCTTCCAAG-1     1   0.000      0.991 1.00 0.00
#> TCAGGATGCCTTTA-1     1   0.000      0.991 1.00 0.00
#> TCATCAACTGTTCT-1     2   0.000      0.990 0.00 1.00
#> TCATTCGATACAGC-1     1   0.000      0.991 1.00 0.00
#> TCCCGAACTTCGCC-1     1   0.000      0.991 1.00 0.00
#> TCGACCTGCCGATA-1     1   0.000      0.991 1.00 0.00
#> TCTAACACGAGCAG-1     2   0.000      0.990 0.00 1.00
#> TCTAAGCTTCTAGG-1     1   0.000      0.991 1.00 0.00
#> TCTACAACGACTAC-1     2   0.000      0.990 0.00 1.00
#> TCTAGTTGCACCAA-1     2   0.000      0.990 0.00 1.00
#> TCTTCAGAGCTACA-1     2   0.000      0.990 0.00 1.00
#> TGAACCGACTACTT-1     1   0.000      0.991 1.00 0.00
#> TGAACCGATTCGGA-1     1   0.000      0.991 1.00 0.00
#> TGACTTACAGTCTG-1     2   0.000      0.990 0.00 1.00
#> TGAGCTGAATGCTG-1     1   0.000      0.991 1.00 0.00
#> TGAGGTACGAACCT-1     1   0.000      0.991 1.00 0.00
#> TGATCGGACTGACA-1     1   0.000      0.991 1.00 0.00
#> TGATCGGATATGCG-1     1   0.000      0.991 1.00 0.00
#> TGCAATCTTCAGGT-1     2   0.000      0.990 0.00 1.00
#> TGCCCAACCGCATA-1     1   0.000      0.991 1.00 0.00
#> TGCGTAGATGGTCA-1     1   0.000      0.991 1.00 0.00
#> TGGAAAGAGGTCAT-1     1   0.000      0.991 1.00 0.00
#> TGGACCCTGGTACT-1     2   0.000      0.990 0.00 1.00
#> TGGCACCTTCAGTG-1     2   0.000      0.990 0.00 1.00
#> TGTAACCTTGCCTC-1     2   0.000      0.990 0.00 1.00
#> TGTACTTGCTCTAT-1     1   0.000      0.991 1.00 0.00
#> TGTAGGTGCTCTAT-1     2   0.000      0.990 0.00 1.00
#> TGTCAGGAGATGAA-1     1   0.000      0.991 1.00 0.00
#> TGTGAGACTGTCAG-1     1   0.000      0.991 1.00 0.00
#> TGTGAGTGAGTGCT-1     1   0.000      0.991 1.00 0.00
#> TGTTACACCGCATA-1     1   0.000      0.991 1.00 0.00
#> TTACTCGACGCAAT-1     2   0.000      0.990 0.00 1.00
#> TTAGCTACTGTCCC-1     2   0.000      0.990 0.00 1.00
#> TTAGGGTGTCCTGC-1     2   0.000      0.990 0.00 1.00
#> TTATCCGAGAAAGT-1     2   0.000      0.990 0.00 1.00
#> TTATGGCTTATGGC-1     2   0.000      0.990 0.00 1.00
#> TTATTCCTATGCTG-1     2   0.000      0.990 0.00 1.00
#> TTCAACACGGACGA-1     1   0.000      0.991 1.00 0.00
#> TTCACAACCCGTTC-1     2   0.000      0.990 0.00 1.00
#> TTCCTAGACTAGTG-1     1   0.000      0.991 1.00 0.00
#> TTCGAGGATAGAAG-1     1   0.000      0.991 1.00 0.00
#> TTCGTATGTCCTTA-1     2   0.000      0.990 0.00 1.00
#> TTCTAGTGGTCACA-1     2   0.000      0.990 0.00 1.00
#> TTCTTACTCTGGAT-1     1   0.000      0.991 1.00 0.00
#> TTGAATGAACTACG-1     1   0.000      0.991 1.00 0.00
#> TTGAGGACTACGCA-1     2   0.000      0.990 0.00 1.00
#> TTGCTAACACGCTA-1     1   0.000      0.991 1.00 0.00
#> TTGCTATGGTACGT-1     2   0.000      0.990 0.00 1.00
#> TTGCTATGGTAGGG-1     1   0.000      0.991 1.00 0.00
#> TTGGTACTACTGGT-1     2   0.000      0.990 0.00 1.00
#> TTTATCCTGTTGTG-1     2   0.000      0.990 0.00 1.00

show/hide code output

cbind(get_classes(res, k = 3), get_membership(res, k = 3))
#>                  class entropy silhouette   p1   p2   p3
#> AAACCGTGCTTCCG-1     3  0.0892     0.9160 0.00 0.02 0.98
#> AAAGCAGATATCGG-1     2  0.2959     0.8684 0.00 0.90 0.10
#> AAATCAACCCTATT-1     3  0.0000     0.9142 0.00 0.00 1.00
#> AAATCATGACCACA-1     1  0.0000     0.9899 1.00 0.00 0.00
#> AAATGTTGTGGCAT-1     2  0.0000     0.9309 0.00 1.00 0.00
#> AAATTCGAGCTGAT-1     1  0.0000     0.9899 1.00 0.00 0.00
#> AACACGTGTACGAC-1     1  0.0000     0.9899 1.00 0.00 0.00
#> AACATTGATGGGAG-1     1  0.0000     0.9899 1.00 0.00 0.00
#> AACCAGTGATACCG-1     1  0.0000     0.9899 1.00 0.00 0.00
#> AACCGCCTCTACGA-1     2  0.5016     0.6728 0.00 0.76 0.24
#> AACCTACTGTGAGG-1     2  0.0000     0.9309 0.00 1.00 0.00
#> AACCTTACTAACGC-1     1  0.0000     0.9899 1.00 0.00 0.00
#> AACCTTTGTACGCA-1     1  0.0000     0.9899 1.00 0.00 0.00
#> AAGATGGAGAACTC-1     2  0.0000     0.9309 0.00 1.00 0.00
#> AAGATGGAGATAAG-1     3  0.1529     0.9197 0.00 0.04 0.96
#> AAGATTACAGATCC-1     3  0.2959     0.8769 0.00 0.10 0.90
#> AAGCCATGAACTGC-1     3  0.1529     0.9218 0.00 0.04 0.96
#> AAGCGACTCCTCAC-1     3  0.0000     0.9142 0.00 0.00 1.00
#> AAGCGACTTTGACG-1     1  0.0000     0.9899 1.00 0.00 0.00
#> AAGTTCCTCATTCT-1     3  0.0892     0.9080 0.02 0.00 0.98
#> AATCTCACAGCCTA-1     2  0.0000     0.9309 0.00 1.00 0.00
#> AATGATACGGTCAT-1     2  0.0000     0.9309 0.00 1.00 0.00
#> AATTACGAATTCCT-1     3  0.1529     0.9218 0.00 0.04 0.96
#> AATTGATGTCGCAA-1     1  0.0000     0.9899 1.00 0.00 0.00
#> ACAAATTGATTCTC-1     1  0.0000     0.9899 1.00 0.00 0.00
#> ACAAGAGAAGTCGT-1     2  0.0000     0.9309 0.00 1.00 0.00
#> ACAGCAACCTCAAG-1     1  0.0000     0.9899 1.00 0.00 0.00
#> ACCAGTGAATACCG-1     1  0.0000     0.9899 1.00 0.00 0.00
#> ACCCAAGAATTCCT-1     1  0.0000     0.9899 1.00 0.00 0.00
#> ACCCACTGTCGTAG-1     2  0.0000     0.9309 0.00 1.00 0.00
#> ACCCTCGATAAGGA-1     2  0.4555     0.7572 0.00 0.80 0.20
#> ACCTATTGTGCCCT-1     1  0.0000     0.9899 1.00 0.00 0.00
#> ACCTTTGACTCCCA-1     2  0.0000     0.9309 0.00 1.00 0.00
#> ACCTTTGAGGAACG-1     2  0.0000     0.9309 0.00 1.00 0.00
#> ACCTTTGAGGAAGC-1     3  0.0000     0.9142 0.00 0.00 1.00
#> ACGAACTGGCTATG-1     1  0.0000     0.9899 1.00 0.00 0.00
#> ACGACCCTATCTCT-1     3  0.0892     0.9195 0.00 0.02 0.98
#> ACGAGGGACAGGAG-1     3  0.1529     0.9218 0.00 0.04 0.96
#> ACGCCTTGCTCCCA-1     1  0.0000     0.9899 1.00 0.00 0.00
#> ACGGAACTGTCGTA-1     1  0.0000     0.9899 1.00 0.00 0.00
#> ACGTCCTGTGAACC-1     2  0.0000     0.9309 0.00 1.00 0.00
#> ACGTGATGCCATGA-1     3  0.1529     0.9218 0.00 0.04 0.96
#> ACGTGATGTAACCG-1     1  0.0000     0.9899 1.00 0.00 0.00
#> ACGTTGGATCAGGT-1     2  0.0000     0.9309 0.00 1.00 0.00
#> ACTGAGACCCATAG-1     1  0.0000     0.9899 1.00 0.00 0.00
#> ACTTAGCTGCGTAT-1     1  0.0000     0.9899 1.00 0.00 0.00
#> ACTTGGGATTGACG-1     2  0.6126     0.3662 0.00 0.60 0.40
#> ACTTTGTGGATAGA-1     2  0.1529     0.9047 0.00 0.96 0.04
#> AGACGTACTCGTGA-1     1  0.0000     0.9899 1.00 0.00 0.00
#> AGAGCGGAGGCAAG-1     2  0.0000     0.9309 0.00 1.00 0.00
#> AGAGTCTGGTCGTA-1     1  0.0000     0.9899 1.00 0.00 0.00
#> AGATATTGGCCAAT-1     2  0.0000     0.9309 0.00 1.00 0.00
#> AGATTAACGTTCTT-1     1  0.0000     0.9899 1.00 0.00 0.00
#> AGCACTGATGCTTT-1     3  0.1529     0.9218 0.00 0.04 0.96
#> AGCATCGATAACCG-1     2  0.0000     0.9309 0.00 1.00 0.00
#> AGCCAATGGGGAGT-1     1  0.0000     0.9899 1.00 0.00 0.00
#> AGCCTCACTGTCAG-1     2  0.6192     0.2469 0.00 0.58 0.42
#> AGCGTAACTGAGAA-1     2  0.0000     0.9309 0.00 1.00 0.00
#> AGCTGAACCATACG-1     1  0.0000     0.9899 1.00 0.00 0.00
#> AGGAACCTCTTAGG-1     1  0.0000     0.9899 1.00 0.00 0.00
#> AGGTCTGATTCTCA-1     3  0.9696     0.0998 0.22 0.36 0.42
#> AGTAGGCTTGCCTC-1     1  0.0000     0.9899 1.00 0.00 0.00
#> AGTATAACTTGTCT-1     1  0.0000     0.9899 1.00 0.00 0.00
#> AGTCTACTTGCATG-1     1  0.2066     0.9319 0.94 0.00 0.06
#> AGTGACTGCAACTG-1     1  0.0000     0.9899 1.00 0.00 0.00
#> ATACCACTCTAAGC-1     3  0.1529     0.9218 0.00 0.04 0.96
#> ATACCGGAATGCTG-1     3  0.1529     0.9218 0.00 0.04 0.96
#> ATACTCTGCTTCGC-1     2  0.6126     0.3585 0.00 0.60 0.40
#> ATAGGAGAAACAGA-1     2  0.2537     0.8835 0.00 0.92 0.08
#> ATAGTTGACCCTCA-1     1  0.0000     0.9899 1.00 0.00 0.00
#> ATCAAATGGGTAAA-1     1  0.0000     0.9899 1.00 0.00 0.00
#> ATCCAGGACGCTAA-1     1  0.0000     0.9899 1.00 0.00 0.00
#> ATCCATACTTCATC-1     1  0.0000     0.9899 1.00 0.00 0.00
#> ATCGACGAAACTGC-1     2  0.0000     0.9309 0.00 1.00 0.00
#> ATCGCAGAATCTCT-1     1  0.0000     0.9899 1.00 0.00 0.00
#> ATCGTTTGCCTACC-1     2  0.0000     0.9309 0.00 1.00 0.00
#> ATCTGGGAAACCAC-1     2  0.0000     0.9309 0.00 1.00 0.00
#> ATCTGGGAAGTGTC-1     3  0.1529     0.9218 0.00 0.04 0.96
#> ATCTGTTGCCTTCG-1     3  0.0892     0.9195 0.00 0.02 0.98
#> ATGACGTGATCGGT-1     1  0.0000     0.9899 1.00 0.00 0.00
#> ATGATATGTTGTCT-1     3  0.5835     0.5360 0.00 0.34 0.66
#> ATGCACGATTGGTG-1     2  0.0000     0.9309 0.00 1.00 0.00
#> ATGCCGCTTGAACC-1     2  0.3686     0.8295 0.00 0.86 0.14
#> ATGCGATGCTATGG-1     3  0.2959     0.8775 0.00 0.10 0.90
#> ATGTAAACGGGATG-1     3  0.5016     0.7415 0.00 0.24 0.76
#> ATTACCTGGAGGAC-1     1  0.0000     0.9899 1.00 0.00 0.00
#> ATTCGACTTTTGTC-1     1  0.0000     0.9899 1.00 0.00 0.00
#> ATTGCACTGAGAGC-1     1  0.0892     0.9709 0.98 0.00 0.02
#> ATTGCACTTGCTTT-1     1  0.0000     0.9899 1.00 0.00 0.00
#> ATTGTAGATTCCCG-1     3  0.1529     0.9218 0.00 0.04 0.96
#> ATTTAGGAACCATG-1     1  0.0000     0.9899 1.00 0.00 0.00
#> ATTTCTCTACTTTC-1     1  0.0000     0.9899 1.00 0.00 0.00
#> ATTTCTCTCACTTT-1     1  0.0892     0.9702 0.98 0.02 0.00
#> CAACCAGAGTTCAG-1     2  0.1529     0.9046 0.00 0.96 0.04
#> CAACGATGCGCAAT-1     1  0.3686     0.8355 0.86 0.14 0.00
#> CAACGTGACTCCAC-1     2  0.5216     0.6669 0.00 0.74 0.26
#> CAAGAAGACGTCTC-1     3  0.5016     0.7408 0.00 0.24 0.76
#> CAAGCTGACCATAG-1     1  0.0000     0.9899 1.00 0.00 0.00
#> CAATTCTGCTTGTT-1     3  0.2066     0.9039 0.00 0.06 0.94
#> CAATTCTGGCGTAT-1     1  0.0000     0.9899 1.00 0.00 0.00
#> CACAGCCTTGCCAA-1     1  0.0000     0.9899 1.00 0.00 0.00
#> CACTGCTGAGACTC-1     1  0.0000     0.9899 1.00 0.00 0.00
#> CAGACCCTAAGGTA-1     1  0.0000     0.9899 1.00 0.00 0.00
#> CAGCACCTGTAGGG-1     2  0.0000     0.9309 0.00 1.00 0.00
#> CAGCTCTGTCGTAG-1     2  0.0892     0.9182 0.00 0.98 0.02
#> CAGGCCGAATCTCT-1     3  0.0000     0.9142 0.00 0.00 1.00
#> CAGTTGGAAAGAGT-1     3  0.2959     0.8779 0.00 0.10 0.90
#> CATACTTGGGTTAC-1     1  0.1529     0.9520 0.96 0.00 0.04
#> CATCAGGATCCTAT-1     1  0.0000     0.9899 1.00 0.00 0.00
#> CATCAGGATGCACA-1     1  0.5159     0.7926 0.82 0.14 0.04
#> CATCATACCGCATA-1     2  0.0000     0.9309 0.00 1.00 0.00
#> CATCTCCTCGAACT-1     2  0.4556     0.8208 0.08 0.86 0.06
#> CATGCGCTAGTCAC-1     1  0.0000     0.9899 1.00 0.00 0.00
#> CATGCGCTTTGCAG-1     1  0.0000     0.9899 1.00 0.00 0.00
#> CATTGTACTTTGCT-1     1  0.0000     0.9899 1.00 0.00 0.00
#> CCAAAGTGCTACGA-1     2  0.0000     0.9309 0.00 1.00 0.00
#> CCACCATGGACGAG-1     1  0.0000     0.9899 1.00 0.00 0.00
#> CCACTTCTCGGGAA-1     3  0.6126     0.3469 0.00 0.40 0.60
#> CCAGCACTGCGATT-1     1  0.1529     0.9518 0.96 0.00 0.04
#> CCATCGTGCTAGAC-1     1  0.0000     0.9899 1.00 0.00 0.00
#> CCCAACACTTTGTC-1     2  0.0000     0.9309 0.00 1.00 0.00
#> CCCAGACTGCCTTC-1     2  0.0000     0.9309 0.00 1.00 0.00
#> CCCAGACTTTCGCC-1     1  0.0000     0.9899 1.00 0.00 0.00
#> CCCAGTTGCAGTTG-1     3  0.3340     0.8591 0.00 0.12 0.88
#> CCCTTACTAACCAC-1     2  0.0000     0.9309 0.00 1.00 0.00
#> CCGAAAACCTTGTT-1     1  0.4002     0.8079 0.84 0.16 0.00
#> CCGACTACCCAGTA-1     2  0.0000     0.9309 0.00 1.00 0.00
#> CCGATAGAGTTGGT-1     3  0.0892     0.9165 0.00 0.02 0.98
#> CCGCTATGTGCAAC-1     2  0.0000     0.9309 0.00 1.00 0.00
#> CCGTACACGTTGGT-1     2  0.0000     0.9309 0.00 1.00 0.00
#> CCTATAACTGCATG-1     1  0.0000     0.9899 1.00 0.00 0.00
#> CCTCGAACCCGTAA-1     1  0.0000     0.9899 1.00 0.00 0.00
#> CCTTAATGTTCTAC-1     1  0.0000     0.9899 1.00 0.00 0.00
#> CGAGGCACTATGCG-1     2  0.0000     0.9309 0.00 1.00 0.00
#> CGAGTATGTCACCC-1     1  0.0000     0.9899 1.00 0.00 0.00
#> CGATACGAACAGTC-1     2  0.6244     0.1699 0.00 0.56 0.44
#> CGATCAGATGTGAC-1     3  0.1529     0.9218 0.00 0.04 0.96
#> CGCAGGACTTGTCT-1     1  0.4002     0.8079 0.84 0.16 0.00
#> CGCAGGTGCCATAG-1     1  0.0000     0.9899 1.00 0.00 0.00
#> CGCCTAACGAATGA-1     3  0.2537     0.9060 0.00 0.08 0.92
#> CGCTACTGAACAGA-1     2  0.5835     0.4584 0.00 0.66 0.34
#> CGGCACGACTACGA-1     1  0.0000     0.9899 1.00 0.00 0.00
#> CGGCGAACCAGTCA-1     3  0.0000     0.9142 0.00 0.00 1.00
#> CGTAGCCTGTATGC-1     1  0.0000     0.9899 1.00 0.00 0.00
#> CGTGCACTTATGGC-1     3  0.5397     0.6489 0.00 0.28 0.72
#> CGTTAGGATCATTC-1     2  0.0000     0.9309 0.00 1.00 0.00
#> CTAACACTAGTGCT-1     2  0.0000     0.9309 0.00 1.00 0.00
#> CTACGCACACCTAG-1     1  0.0000     0.9899 1.00 0.00 0.00
#> CTACGGCTTTCTTG-1     2  0.0000     0.9309 0.00 1.00 0.00
#> CTAGAGACTTTGGG-1     1  0.0000     0.9899 1.00 0.00 0.00
#> CTAGGTGATGGTTG-1     1  0.0000     0.9899 1.00 0.00 0.00
#> CTATTGACACTGGT-1     3  0.0000     0.9142 0.00 0.00 1.00
#> CTATTGACGGTGAG-1     3  0.0892     0.9076 0.02 0.00 0.98
#> CTCAGGCTCGTTGA-1     1  0.0000     0.9899 1.00 0.00 0.00
#> CTCATTGATGCTTT-1     3  0.0000     0.9142 0.00 0.00 1.00
#> CTCCACGAGAGATA-1     3  0.1529     0.9218 0.00 0.04 0.96
#> CTCCGAACAAGTGA-1     1  0.0000     0.9899 1.00 0.00 0.00
#> CTGAAGTGAAGCCT-1     1  0.0000     0.9899 1.00 0.00 0.00
#> CTGATTTGGTGTTG-1     2  0.0000     0.9309 0.00 1.00 0.00
#> CTGCAGCTGGATTC-1     2  0.1529     0.8929 0.04 0.96 0.00
#> CTGTATACGTACGT-1     2  0.2959     0.8649 0.00 0.90 0.10
#> CTGTGAGACAACCA-1     1  0.0000     0.9899 1.00 0.00 0.00
#> CTTCACCTACCTGA-1     1  0.0000     0.9899 1.00 0.00 0.00
#> GAAACCTGGACTAC-1     1  0.0000     0.9899 1.00 0.00 0.00
#> GAAAGATGCTGATG-1     1  0.0000     0.9899 1.00 0.00 0.00
#> GAAAGTGAAAGTGA-1     3  0.1529     0.9218 0.00 0.04 0.96
#> GAACACACGTGCAT-1     2  0.0000     0.9309 0.00 1.00 0.00
#> GAACAGCTAACTGC-1     2  0.6244     0.2153 0.44 0.56 0.00
#> GAACAGCTCTCAGA-1     1  0.0000     0.9899 1.00 0.00 0.00
#> GAACTGTGACCTGA-1     1  0.0000     0.9899 1.00 0.00 0.00
#> GAAGCGGACCTATT-1     2  0.0000     0.9309 0.00 1.00 0.00
#> GAAGCTACGAATGA-1     2  0.1529     0.9047 0.00 0.96 0.04
#> GAAGGTCTTAAAGG-1     3  0.1529     0.9218 0.00 0.04 0.96
#> GAAGTAGATCCAAG-1     1  0.0000     0.9899 1.00 0.00 0.00
#> GAAGTGCTCCGCTT-1     2  0.0000     0.9309 0.00 1.00 0.00
#> GACAGTACGAGCTT-1     1  0.0000     0.9899 1.00 0.00 0.00
#> GACAGTACTTCGGA-1     1  0.0000     0.9899 1.00 0.00 0.00
#> GACATTCTCCACCT-1     3  0.1529     0.9218 0.00 0.04 0.96
#> GACCTCACGTACGT-1     3  0.0892     0.9153 0.00 0.02 0.98
#> GACGGCACGAGATA-1     2  0.0000     0.9309 0.00 1.00 0.00
#> GAGATAGAAAAAGC-1     2  0.0000     0.9309 0.00 1.00 0.00
#> GAGATCACGACAAA-1     1  0.0000     0.9899 1.00 0.00 0.00
#> GAGCATACTTTGCT-1     3  0.0000     0.9142 0.00 0.00 1.00
#> GAGGTACTTAGCGT-1     2  0.5948     0.4724 0.00 0.64 0.36
#> GAGGTTACTCGTTT-1     3  0.1529     0.9202 0.00 0.04 0.96
#> GAGTTGTGTATGCG-1     1  0.0000     0.9899 1.00 0.00 0.00
#> GATAGCACGAAGGC-1     3  0.2959     0.8775 0.00 0.10 0.90
#> GATATTGACGAGTT-1     1  0.0000     0.9899 1.00 0.00 0.00
#> GATCTTACACCCAA-1     1  0.0000     0.9899 1.00 0.00 0.00
#> GATTCGGACAGGAG-1     2  0.2959     0.8633 0.00 0.90 0.10
#> GATTCGGAGAAGGC-1     1  0.0000     0.9899 1.00 0.00 0.00
#> GATTCTTGATTCGG-1     2  0.0000     0.9309 0.00 1.00 0.00
#> GATTTAGACACTCC-1     1  0.0000     0.9899 1.00 0.00 0.00
#> GCAATCGAGACGTT-1     3  0.3686     0.8400 0.00 0.14 0.86
#> GCACCTTGGGGAGT-1     3  0.0892     0.9163 0.00 0.02 0.98
#> GCACGGTGCTATGG-1     2  0.0000     0.9309 0.00 1.00 0.00
#> GCACTAGACCTTTA-1     1  0.0000     0.9899 1.00 0.00 0.00
#> GCCGACGAACTCTT-1     3  0.2959     0.8776 0.00 0.10 0.90
#> GCCTACACCACTGA-1     3  0.0000     0.9142 0.00 0.00 1.00
#> GCCTAGCTTCTCTA-1     1  0.0000     0.9899 1.00 0.00 0.00
#> GCGTAAACACGGTT-1     3  0.1529     0.9218 0.00 0.04 0.96
#> GCGTAATGCACCAA-1     1  0.0000     0.9899 1.00 0.00 0.00
#> GCGTATGATGAGAA-1     2  0.1529     0.9047 0.00 0.96 0.04
#> GCTCAAGAACCATG-1     3  0.0000     0.9142 0.00 0.00 1.00
#> GCTCAAGAAGTCAC-1     3  0.0892     0.9168 0.00 0.02 0.98
#> GGAACTTGAAGGTA-1     2  0.0000     0.9309 0.00 1.00 0.00
#> GGACCCGAAGCTAC-1     2  0.0892     0.9182 0.00 0.98 0.02
#> GGACCGTGGGAACG-1     3  0.1529     0.9218 0.00 0.04 0.96
#> GGAGCGCTACGCAT-1     2  0.5560     0.5669 0.00 0.70 0.30
#> GGATTTCTTTGTCT-1     2  0.0000     0.9309 0.00 1.00 0.00
#> GGCACGTGGCTTAG-1     1  0.0000     0.9899 1.00 0.00 0.00
#> GGCGCATGCCTAAG-1     1  0.0000     0.9899 1.00 0.00 0.00
#> GGGAACGAAGCTCA-1     1  0.0000     0.9899 1.00 0.00 0.00
#> GGGCACACGGTGAG-1     3  0.5216     0.6235 0.26 0.00 0.74
#> GGGCCAACCTTGGA-1     3  0.1529     0.9218 0.00 0.04 0.96
#> GGTCTAGATAGCGT-1     2  0.0000     0.9309 0.00 1.00 0.00
#> GTAACGTGACCTCC-1     2  0.0000     0.9309 0.00 1.00 0.00
#> GTACCCTGACAGTC-1     1  0.0000     0.9899 1.00 0.00 0.00
#> GTAGCTGAAGCTAC-1     1  0.0000     0.9899 1.00 0.00 0.00
#> GTCCACTGGGTACT-1     1  0.0000     0.9899 1.00 0.00 0.00
#> GTCCCATGTGGTGT-1     2  0.0000     0.9309 0.00 1.00 0.00
#> GTCGAATGAAGGCG-1     2  0.0000     0.9309 0.00 1.00 0.00
#> GTCTAACTGGTCTA-1     1  0.0000     0.9899 1.00 0.00 0.00
#> GTGGATTGCACTAG-1     1  0.0000     0.9899 1.00 0.00 0.00
#> GTTAACCTTGCTTT-1     3  0.1529     0.9218 0.00 0.04 0.96
#> GTTAGGTGCCAGTA-1     2  0.0000     0.9309 0.00 1.00 0.00
#> GTTAGGTGCCCAAA-1     1  0.0000     0.9899 1.00 0.00 0.00
#> GTTGAGTGGTCTTT-1     2  0.0000     0.9309 0.00 1.00 0.00
#> GTTGGATGTTTACC-1     1  0.0000     0.9899 1.00 0.00 0.00
#> GTTGTACTATTCCT-1     2  0.0000     0.9309 0.00 1.00 0.00
#> TAACACCTTCGTAG-1     2  0.0000     0.9309 0.00 1.00 0.00
#> TAAGCGTGGACAAA-1     2  0.0000     0.9309 0.00 1.00 0.00
#> TAAGCGTGTGCTCC-1     1  0.0000     0.9899 1.00 0.00 0.00
#> TAAGGCTGTCTCGC-1     2  0.0000     0.9309 0.00 1.00 0.00
#> TAATGTGACTGCAA-1     3  0.4291     0.7867 0.00 0.18 0.82
#> TACATCACCTGTTT-1     1  0.0000     0.9899 1.00 0.00 0.00
#> TACATCACTGAACC-1     1  0.0000     0.9899 1.00 0.00 0.00
#> TACGAGTGATGCTG-1     3  0.0000     0.9142 0.00 0.00 1.00
#> TACGATCTCACTGA-1     3  0.2066     0.9041 0.00 0.06 0.94
#> TACGCCACTCCCAC-1     1  0.0000     0.9899 1.00 0.00 0.00
#> TAGCATCTGCTGTA-1     1  0.0000     0.9899 1.00 0.00 0.00
#> TAGCCGCTTTCCAT-1     3  0.5216     0.6726 0.00 0.26 0.74
#> TAGGTTCTTCTTAC-1     1  0.0000     0.9899 1.00 0.00 0.00
#> TATAAGACAGCTCA-1     1  0.0000     0.9899 1.00 0.00 0.00
#> TATAAGTGACACCA-1     1  0.0000     0.9899 1.00 0.00 0.00
#> TATAAGTGTGGTGT-1     1  0.0000     0.9899 1.00 0.00 0.00
#> TATAGATGTTCCGC-1     1  0.0000     0.9899 1.00 0.00 0.00
#> TATCGACTCGATAC-1     1  0.0000     0.9899 1.00 0.00 0.00
#> TATGAATGTTTGCT-1     1  0.0000     0.9899 1.00 0.00 0.00
#> TATGTCACTAACCG-1     3  0.2066     0.9130 0.00 0.06 0.94
#> TCAATCACAGTCGT-1     1  0.0000     0.9899 1.00 0.00 0.00
#> TCACCCGAGACGGA-1     2  0.0000     0.9309 0.00 1.00 0.00
#> TCACCGTGCTCGCT-1     1  0.0000     0.9899 1.00 0.00 0.00
#> TCACCTCTTCCAAG-1     1  0.0000     0.9899 1.00 0.00 0.00
#> TCAGGATGCCTTTA-1     1  0.0000     0.9899 1.00 0.00 0.00
#> TCATCAACTGTTCT-1     3  0.2066     0.9044 0.00 0.06 0.94
#> TCATTCGATACAGC-1     1  0.0000     0.9899 1.00 0.00 0.00
#> TCCCGAACTTCGCC-1     1  0.0000     0.9899 1.00 0.00 0.00
#> TCGACCTGCCGATA-1     1  0.0000     0.9899 1.00 0.00 0.00
#> TCTAACACGAGCAG-1     3  0.1529     0.9218 0.00 0.04 0.96
#> TCTAAGCTTCTAGG-1     1  0.0000     0.9899 1.00 0.00 0.00
#> TCTACAACGACTAC-1     2  0.0000     0.9309 0.00 1.00 0.00
#> TCTAGTTGCACCAA-1     2  0.1529     0.9047 0.00 0.96 0.04
#> TCTTCAGAGCTACA-1     2  0.0000     0.9309 0.00 1.00 0.00
#> TGAACCGACTACTT-1     1  0.0000     0.9899 1.00 0.00 0.00
#> TGAACCGATTCGGA-1     1  0.6244     0.2141 0.56 0.00 0.44
#> TGACTTACAGTCTG-1     2  0.0000     0.9309 0.00 1.00 0.00
#> TGAGCTGAATGCTG-1     1  0.0000     0.9899 1.00 0.00 0.00
#> TGAGGTACGAACCT-1     1  0.0000     0.9899 1.00 0.00 0.00
#> TGATCGGACTGACA-1     1  0.0000     0.9899 1.00 0.00 0.00
#> TGATCGGATATGCG-1     1  0.0000     0.9899 1.00 0.00 0.00
#> TGCAATCTTCAGGT-1     3  0.1529     0.9218 0.00 0.04 0.96
#> TGCCCAACCGCATA-1     1  0.0000     0.9899 1.00 0.00 0.00
#> TGCGTAGATGGTCA-1     1  0.0000     0.9899 1.00 0.00 0.00
#> TGGAAAGAGGTCAT-1     1  0.0000     0.9899 1.00 0.00 0.00
#> TGGACCCTGGTACT-1     3  0.2959     0.8777 0.00 0.10 0.90
#> TGGCACCTTCAGTG-1     2  0.0000     0.9309 0.00 1.00 0.00
#> TGTAACCTTGCCTC-1     2  0.3340     0.8499 0.00 0.88 0.12
#> TGTACTTGCTCTAT-1     1  0.0000     0.9899 1.00 0.00 0.00
#> TGTAGGTGCTCTAT-1     3  0.1529     0.9218 0.00 0.04 0.96
#> TGTCAGGAGATGAA-1     1  0.0000     0.9899 1.00 0.00 0.00
#> TGTGAGACTGTCAG-1     1  0.0000     0.9899 1.00 0.00 0.00
#> TGTGAGTGAGTGCT-1     1  0.0000     0.9899 1.00 0.00 0.00
#> TGTTACACCGCATA-1     1  0.0000     0.9899 1.00 0.00 0.00
#> TTACTCGACGCAAT-1     3  0.1529     0.9218 0.00 0.04 0.96
#> TTAGCTACTGTCCC-1     3  0.0000     0.9142 0.00 0.00 1.00
#> TTAGGGTGTCCTGC-1     3  0.4291     0.7946 0.00 0.18 0.82
#> TTATCCGAGAAAGT-1     2  0.3686     0.8300 0.00 0.86 0.14
#> TTATGGCTTATGGC-1     3  0.1529     0.9218 0.00 0.04 0.96
#> TTATTCCTATGCTG-1     2  0.6126     0.2950 0.00 0.60 0.40
#> TTCAACACGGACGA-1     1  0.0000     0.9899 1.00 0.00 0.00
#> TTCACAACCCGTTC-1     2  0.2537     0.8717 0.00 0.92 0.08
#> TTCCTAGACTAGTG-1     1  0.0000     0.9899 1.00 0.00 0.00
#> TTCGAGGATAGAAG-1     1  0.0000     0.9899 1.00 0.00 0.00
#> TTCGTATGTCCTTA-1     2  0.0000     0.9309 0.00 1.00 0.00
#> TTCTAGTGGTCACA-1     3  0.1529     0.9116 0.00 0.04 0.96
#> TTCTTACTCTGGAT-1     1  0.0000     0.9899 1.00 0.00 0.00
#> TTGAATGAACTACG-1     1  0.0000     0.9899 1.00 0.00 0.00
#> TTGAGGACTACGCA-1     3  0.1529     0.9218 0.00 0.04 0.96
#> TTGCTAACACGCTA-1     1  0.3686     0.8414 0.86 0.00 0.14
#> TTGCTATGGTACGT-1     2  0.0000     0.9309 0.00 1.00 0.00
#> TTGCTATGGTAGGG-1     1  0.0000     0.9899 1.00 0.00 0.00
#> TTGGTACTACTGGT-1     3  0.1529     0.9116 0.00 0.04 0.96
#> TTTATCCTGTTGTG-1     3  0.5216     0.6744 0.00 0.26 0.74

show/hide code output

cbind(get_classes(res, k = 4), get_membership(res, k = 4))
#>                  class entropy silhouette   p1   p2   p3   p4
#> AAACCGTGCTTCCG-1     4  0.3525     0.6682 0.00 0.04 0.10 0.86
#> AAAGCAGATATCGG-1     4  0.5570     0.2368 0.00 0.44 0.02 0.54
#> AAATCAACCCTATT-1     3  0.4994     0.0858 0.00 0.00 0.52 0.48
#> AAATCATGACCACA-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> AAATGTTGTGGCAT-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> AAATTCGAGCTGAT-1     1  0.2011     0.9058 0.92 0.00 0.00 0.08
#> AACACGTGTACGAC-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> AACATTGATGGGAG-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> AACCAGTGATACCG-1     1  0.0707     0.9318 0.98 0.00 0.00 0.02
#> AACCGCCTCTACGA-1     2  0.4134     0.6214 0.00 0.74 0.26 0.00
#> AACCTACTGTGAGG-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> AACCTTACTAACGC-1     1  0.2011     0.9043 0.92 0.00 0.00 0.08
#> AACCTTTGTACGCA-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> AAGATGGAGAACTC-1     2  0.0707     0.8857 0.00 0.98 0.00 0.02
#> AAGATGGAGATAAG-1     3  0.6150     0.1426 0.00 0.06 0.58 0.36
#> AAGATTACAGATCC-1     4  0.7888     0.2987 0.00 0.32 0.30 0.38
#> AAGCCATGAACTGC-1     3  0.0000     0.8494 0.00 0.00 1.00 0.00
#> AAGCGACTCCTCAC-1     4  0.2921     0.6421 0.00 0.00 0.14 0.86
#> AAGCGACTTTGACG-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> AAGTTCCTCATTCT-1     4  0.0000     0.6482 0.00 0.00 0.00 1.00
#> AATCTCACAGCCTA-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> AATGATACGGTCAT-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> AATTACGAATTCCT-1     3  0.0000     0.8494 0.00 0.00 1.00 0.00
#> AATTGATGTCGCAA-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> ACAAATTGATTCTC-1     1  0.4277     0.6944 0.72 0.00 0.00 0.28
#> ACAAGAGAAGTCGT-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> ACAGCAACCTCAAG-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> ACCAGTGAATACCG-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> ACCCAAGAATTCCT-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> ACCCACTGTCGTAG-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> ACCCTCGATAAGGA-1     2  0.5606    -0.0779 0.00 0.50 0.02 0.48
#> ACCTATTGTGCCCT-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> ACCTTTGACTCCCA-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> ACCTTTGAGGAACG-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> ACCTTTGAGGAAGC-1     3  0.4907     0.1533 0.00 0.00 0.58 0.42
#> ACGAACTGGCTATG-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> ACGACCCTATCTCT-1     3  0.0000     0.8494 0.00 0.00 1.00 0.00
#> ACGAGGGACAGGAG-1     3  0.0000     0.8494 0.00 0.00 1.00 0.00
#> ACGCCTTGCTCCCA-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> ACGGAACTGTCGTA-1     1  0.2011     0.9043 0.92 0.00 0.00 0.08
#> ACGTCCTGTGAACC-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> ACGTGATGCCATGA-1     3  0.0000     0.8494 0.00 0.00 1.00 0.00
#> ACGTGATGTAACCG-1     1  0.1637     0.9147 0.94 0.00 0.00 0.06
#> ACGTTGGATCAGGT-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> ACTGAGACCCATAG-1     1  0.2011     0.9046 0.92 0.00 0.00 0.08
#> ACTTAGCTGCGTAT-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> ACTTGGGATTGACG-1     4  0.7179     0.3477 0.00 0.38 0.14 0.48
#> ACTTTGTGGATAGA-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> AGACGTACTCGTGA-1     1  0.4948     0.4074 0.56 0.00 0.00 0.44
#> AGAGCGGAGGCAAG-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> AGAGTCTGGTCGTA-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> AGATATTGGCCAAT-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> AGATTAACGTTCTT-1     1  0.0707     0.9318 0.98 0.00 0.00 0.02
#> AGCACTGATGCTTT-1     3  0.0000     0.8494 0.00 0.00 1.00 0.00
#> AGCATCGATAACCG-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> AGCCAATGGGGAGT-1     1  0.2011     0.9043 0.92 0.00 0.00 0.08
#> AGCCTCACTGTCAG-1     3  0.6453     0.3159 0.00 0.36 0.56 0.08
#> AGCGTAACTGAGAA-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> AGCTGAACCATACG-1     1  0.1211     0.9243 0.96 0.00 0.00 0.04
#> AGGAACCTCTTAGG-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> AGGTCTGATTCTCA-1     4  0.0707     0.6395 0.02 0.00 0.00 0.98
#> AGTAGGCTTGCCTC-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> AGTATAACTTGTCT-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> AGTCTACTTGCATG-1     1  0.5392     0.6002 0.68 0.00 0.04 0.28
#> AGTGACTGCAACTG-1     1  0.0707     0.9311 0.98 0.00 0.00 0.02
#> ATACCACTCTAAGC-1     3  0.0000     0.8494 0.00 0.00 1.00 0.00
#> ATACCGGAATGCTG-1     3  0.0000     0.8494 0.00 0.00 1.00 0.00
#> ATACTCTGCTTCGC-1     2  0.6554     0.0455 0.00 0.52 0.08 0.40
#> ATAGGAGAAACAGA-1     2  0.5793     0.3040 0.00 0.60 0.04 0.36
#> ATAGTTGACCCTCA-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> ATCAAATGGGTAAA-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> ATCCAGGACGCTAA-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> ATCCATACTTCATC-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> ATCGACGAAACTGC-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> ATCGCAGAATCTCT-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> ATCGTTTGCCTACC-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> ATCTGGGAAACCAC-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> ATCTGGGAAGTGTC-1     3  0.0000     0.8494 0.00 0.00 1.00 0.00
#> ATCTGTTGCCTTCG-1     3  0.5256     0.4961 0.00 0.04 0.70 0.26
#> ATGACGTGATCGGT-1     1  0.1637     0.9143 0.94 0.00 0.00 0.06
#> ATGATATGTTGTCT-1     2  0.7699    -0.1213 0.00 0.40 0.38 0.22
#> ATGCACGATTGGTG-1     2  0.0707     0.8858 0.00 0.98 0.00 0.02
#> ATGCCGCTTGAACC-1     2  0.5271     0.3917 0.00 0.64 0.02 0.34
#> ATGCGATGCTATGG-1     4  0.7344     0.3254 0.00 0.16 0.38 0.46
#> ATGTAAACGGGATG-1     3  0.2011     0.7741 0.00 0.08 0.92 0.00
#> ATTACCTGGAGGAC-1     1  0.2011     0.9068 0.92 0.00 0.00 0.08
#> ATTCGACTTTTGTC-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> ATTGCACTGAGAGC-1     1  0.3172     0.8408 0.84 0.00 0.00 0.16
#> ATTGCACTTGCTTT-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> ATTGTAGATTCCCG-1     3  0.0000     0.8494 0.00 0.00 1.00 0.00
#> ATTTAGGAACCATG-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> ATTTCTCTACTTTC-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> ATTTCTCTCACTTT-1     4  0.5000    -0.2791 0.50 0.00 0.00 0.50
#> CAACCAGAGTTCAG-1     2  0.3400     0.7320 0.00 0.82 0.18 0.00
#> CAACGATGCGCAAT-1     1  0.2830     0.8707 0.90 0.04 0.00 0.06
#> CAACGTGACTCCAC-1     2  0.5986     0.3430 0.00 0.62 0.06 0.32
#> CAAGAAGACGTCTC-1     3  0.2345     0.7525 0.00 0.10 0.90 0.00
#> CAAGCTGACCATAG-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> CAATTCTGCTTGTT-1     4  0.6808     0.4618 0.00 0.12 0.32 0.56
#> CAATTCTGGCGTAT-1     1  0.1637     0.9145 0.94 0.00 0.00 0.06
#> CACAGCCTTGCCAA-1     1  0.1211     0.9243 0.96 0.00 0.00 0.04
#> CACTGCTGAGACTC-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> CAGACCCTAAGGTA-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> CAGCACCTGTAGGG-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> CAGCTCTGTCGTAG-1     2  0.0707     0.8857 0.00 0.98 0.00 0.02
#> CAGGCCGAATCTCT-1     4  0.3037     0.6427 0.02 0.00 0.10 0.88
#> CAGTTGGAAAGAGT-1     4  0.6686     0.5692 0.00 0.20 0.18 0.62
#> CATACTTGGGTTAC-1     1  0.5902     0.6345 0.70 0.00 0.14 0.16
#> CATCAGGATCCTAT-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> CATCAGGATGCACA-1     4  0.2921     0.5611 0.14 0.00 0.00 0.86
#> CATCATACCGCATA-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> CATCTCCTCGAACT-1     4  0.3606     0.6231 0.02 0.14 0.00 0.84
#> CATGCGCTAGTCAC-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> CATGCGCTTTGCAG-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> CATTGTACTTTGCT-1     4  0.5000    -0.2205 0.50 0.00 0.00 0.50
#> CCAAAGTGCTACGA-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> CCACCATGGACGAG-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> CCACTTCTCGGGAA-1     4  0.6320     0.5946 0.00 0.18 0.16 0.66
#> CCAGCACTGCGATT-1     1  0.4790     0.4950 0.62 0.00 0.00 0.38
#> CCATCGTGCTAGAC-1     1  0.4522     0.6388 0.68 0.00 0.00 0.32
#> CCCAACACTTTGTC-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> CCCAGACTGCCTTC-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> CCCAGACTTTCGCC-1     1  0.1637     0.9084 0.94 0.00 0.00 0.06
#> CCCAGTTGCAGTTG-1     4  0.7346     0.4573 0.00 0.20 0.28 0.52
#> CCCTTACTAACCAC-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> CCGAAAACCTTGTT-1     1  0.5106     0.6641 0.72 0.04 0.00 0.24
#> CCGACTACCCAGTA-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> CCGATAGAGTTGGT-1     4  0.1211     0.6597 0.00 0.00 0.04 0.96
#> CCGCTATGTGCAAC-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> CCGTACACGTTGGT-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> CCTATAACTGCATG-1     1  0.2011     0.9043 0.92 0.00 0.00 0.08
#> CCTCGAACCCGTAA-1     1  0.3172     0.8410 0.84 0.00 0.00 0.16
#> CCTTAATGTTCTAC-1     1  0.3801     0.7650 0.78 0.00 0.00 0.22
#> CGAGGCACTATGCG-1     2  0.3610     0.7036 0.00 0.80 0.20 0.00
#> CGAGTATGTCACCC-1     1  0.1211     0.9243 0.96 0.00 0.00 0.04
#> CGATACGAACAGTC-1     3  0.4994     0.0668 0.00 0.48 0.52 0.00
#> CGATCAGATGTGAC-1     3  0.0000     0.8494 0.00 0.00 1.00 0.00
#> CGCAGGACTTGTCT-1     1  0.2706     0.8567 0.90 0.08 0.00 0.02
#> CGCAGGTGCCATAG-1     1  0.4948     0.4000 0.56 0.00 0.00 0.44
#> CGCCTAACGAATGA-1     3  0.0000     0.8494 0.00 0.00 1.00 0.00
#> CGCTACTGAACAGA-1     2  0.5860     0.3066 0.00 0.58 0.38 0.04
#> CGGCACGACTACGA-1     1  0.1211     0.9243 0.96 0.00 0.00 0.04
#> CGGCGAACCAGTCA-1     4  0.2011     0.6590 0.00 0.00 0.08 0.92
#> CGTAGCCTGTATGC-1     1  0.2345     0.8837 0.90 0.00 0.00 0.10
#> CGTGCACTTATGGC-1     2  0.7699    -0.1332 0.00 0.40 0.38 0.22
#> CGTTAGGATCATTC-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> CTAACACTAGTGCT-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> CTACGCACACCTAG-1     1  0.5000     0.2486 0.50 0.00 0.00 0.50
#> CTACGGCTTTCTTG-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> CTAGAGACTTTGGG-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> CTAGGTGATGGTTG-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> CTATTGACACTGGT-1     4  0.1211     0.6563 0.00 0.00 0.04 0.96
#> CTATTGACGGTGAG-1     4  0.4948     0.1955 0.00 0.00 0.44 0.56
#> CTCAGGCTCGTTGA-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> CTCATTGATGCTTT-1     4  0.0707     0.6558 0.00 0.00 0.02 0.98
#> CTCCACGAGAGATA-1     3  0.0000     0.8494 0.00 0.00 1.00 0.00
#> CTCCGAACAAGTGA-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> CTGAAGTGAAGCCT-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> CTGATTTGGTGTTG-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> CTGCAGCTGGATTC-1     2  0.2335     0.8334 0.02 0.92 0.00 0.06
#> CTGTATACGTACGT-1     2  0.4949     0.6684 0.00 0.76 0.18 0.06
#> CTGTGAGACAACCA-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> CTTCACCTACCTGA-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> GAAACCTGGACTAC-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> GAAAGATGCTGATG-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> GAAAGTGAAAGTGA-1     3  0.0000     0.8494 0.00 0.00 1.00 0.00
#> GAACACACGTGCAT-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> GAACAGCTAACTGC-1     2  0.5915     0.2068 0.40 0.56 0.00 0.04
#> GAACAGCTCTCAGA-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> GAACTGTGACCTGA-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> GAAGCGGACCTATT-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> GAAGCTACGAATGA-1     2  0.0707     0.8861 0.00 0.98 0.00 0.02
#> GAAGGTCTTAAAGG-1     3  0.0000     0.8494 0.00 0.00 1.00 0.00
#> GAAGTAGATCCAAG-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> GAAGTGCTCCGCTT-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> GACAGTACGAGCTT-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> GACAGTACTTCGGA-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> GACATTCTCCACCT-1     3  0.0000     0.8494 0.00 0.00 1.00 0.00
#> GACCTCACGTACGT-1     4  0.5883     0.5157 0.00 0.06 0.30 0.64
#> GACGGCACGAGATA-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> GAGATAGAAAAAGC-1     2  0.0707     0.8846 0.00 0.98 0.02 0.00
#> GAGATCACGACAAA-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> GAGCATACTTTGCT-1     3  0.4406     0.4999 0.00 0.00 0.70 0.30
#> GAGGTACTTAGCGT-1     4  0.4406     0.5528 0.00 0.30 0.00 0.70
#> GAGGTTACTCGTTT-1     3  0.6686     0.3782 0.00 0.20 0.62 0.18
#> GAGTTGTGTATGCG-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> GATAGCACGAAGGC-1     4  0.7198     0.4883 0.00 0.28 0.18 0.54
#> GATATTGACGAGTT-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> GATCTTACACCCAA-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> GATTCGGACAGGAG-1     2  0.4797     0.5664 0.00 0.72 0.02 0.26
#> GATTCGGAGAAGGC-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> GATTCTTGATTCGG-1     2  0.2011     0.8378 0.00 0.92 0.08 0.00
#> GATTTAGACACTCC-1     1  0.2345     0.8882 0.90 0.00 0.00 0.10
#> GCAATCGAGACGTT-1     4  0.2335     0.6681 0.00 0.02 0.06 0.92
#> GCACCTTGGGGAGT-1     4  0.3821     0.6641 0.00 0.04 0.12 0.84
#> GCACGGTGCTATGG-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> GCACTAGACCTTTA-1     1  0.4907     0.4432 0.58 0.00 0.00 0.42
#> GCCGACGAACTCTT-1     4  0.7394     0.4708 0.00 0.24 0.24 0.52
#> GCCTACACCACTGA-1     4  0.0707     0.6504 0.00 0.00 0.02 0.98
#> GCCTAGCTTCTCTA-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> GCGTAAACACGGTT-1     3  0.0000     0.8494 0.00 0.00 1.00 0.00
#> GCGTAATGCACCAA-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> GCGTATGATGAGAA-1     2  0.1637     0.8537 0.00 0.94 0.00 0.06
#> GCTCAAGAACCATG-1     3  0.5000     0.0409 0.00 0.00 0.50 0.50
#> GCTCAAGAAGTCAC-1     4  0.6656     0.5624 0.00 0.16 0.22 0.62
#> GGAACTTGAAGGTA-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> GGACCCGAAGCTAC-1     2  0.2011     0.8326 0.00 0.92 0.00 0.08
#> GGACCGTGGGAACG-1     3  0.0000     0.8494 0.00 0.00 1.00 0.00
#> GGAGCGCTACGCAT-1     3  0.5915     0.2800 0.00 0.40 0.56 0.04
#> GGATTTCTTTGTCT-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> GGCACGTGGCTTAG-1     1  0.2345     0.8910 0.90 0.00 0.00 0.10
#> GGCGCATGCCTAAG-1     1  0.0707     0.9319 0.98 0.00 0.00 0.02
#> GGGAACGAAGCTCA-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> GGGCACACGGTGAG-1     4  0.6110     0.3488 0.10 0.00 0.24 0.66
#> GGGCCAACCTTGGA-1     3  0.0000     0.8494 0.00 0.00 1.00 0.00
#> GGTCTAGATAGCGT-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> GTAACGTGACCTCC-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> GTACCCTGACAGTC-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> GTAGCTGAAGCTAC-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> GTCCACTGGGTACT-1     1  0.1637     0.9159 0.94 0.00 0.00 0.06
#> GTCCCATGTGGTGT-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> GTCGAATGAAGGCG-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> GTCTAACTGGTCTA-1     1  0.4994     0.2918 0.52 0.00 0.00 0.48
#> GTGGATTGCACTAG-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> GTTAACCTTGCTTT-1     3  0.0000     0.8494 0.00 0.00 1.00 0.00
#> GTTAGGTGCCAGTA-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> GTTAGGTGCCCAAA-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> GTTGAGTGGTCTTT-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> GTTGGATGTTTACC-1     1  0.2011     0.9043 0.92 0.00 0.00 0.08
#> GTTGTACTATTCCT-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> TAACACCTTCGTAG-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> TAAGCGTGGACAAA-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> TAAGCGTGTGCTCC-1     1  0.0707     0.9287 0.98 0.00 0.00 0.02
#> TAAGGCTGTCTCGC-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> TAATGTGACTGCAA-1     4  0.7004     0.5341 0.00 0.22 0.20 0.58
#> TACATCACCTGTTT-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> TACATCACTGAACC-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> TACGAGTGATGCTG-1     4  0.3335     0.6575 0.00 0.02 0.12 0.86
#> TACGATCTCACTGA-1     4  0.5256     0.5684 0.00 0.04 0.26 0.70
#> TACGCCACTCCCAC-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> TAGCATCTGCTGTA-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> TAGCCGCTTTCCAT-1     4  0.4227     0.6653 0.00 0.12 0.06 0.82
#> TAGGTTCTTCTTAC-1     1  0.1211     0.9243 0.96 0.00 0.00 0.04
#> TATAAGACAGCTCA-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> TATAAGTGACACCA-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> TATAAGTGTGGTGT-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> TATAGATGTTCCGC-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> TATCGACTCGATAC-1     1  0.2011     0.9043 0.92 0.00 0.00 0.08
#> TATGAATGTTTGCT-1     1  0.0707     0.9319 0.98 0.00 0.00 0.02
#> TATGTCACTAACCG-1     3  0.2830     0.7787 0.00 0.04 0.90 0.06
#> TCAATCACAGTCGT-1     1  0.0707     0.9319 0.98 0.00 0.00 0.02
#> TCACCCGAGACGGA-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> TCACCGTGCTCGCT-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> TCACCTCTTCCAAG-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> TCAGGATGCCTTTA-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> TCATCAACTGTTCT-1     4  0.4610     0.6634 0.00 0.10 0.10 0.80
#> TCATTCGATACAGC-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> TCCCGAACTTCGCC-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> TCGACCTGCCGATA-1     1  0.4134     0.7267 0.74 0.00 0.00 0.26
#> TCTAACACGAGCAG-1     3  0.0000     0.8494 0.00 0.00 1.00 0.00
#> TCTAAGCTTCTAGG-1     1  0.1637     0.9164 0.94 0.00 0.00 0.06
#> TCTACAACGACTAC-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> TCTAGTTGCACCAA-1     2  0.4134     0.5955 0.00 0.74 0.00 0.26
#> TCTTCAGAGCTACA-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> TGAACCGACTACTT-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> TGAACCGATTCGGA-1     4  0.0000     0.6482 0.00 0.00 0.00 1.00
#> TGACTTACAGTCTG-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> TGAGCTGAATGCTG-1     1  0.1637     0.9155 0.94 0.00 0.00 0.06
#> TGAGGTACGAACCT-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> TGATCGGACTGACA-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> TGATCGGATATGCG-1     1  0.2011     0.9043 0.92 0.00 0.00 0.08
#> TGCAATCTTCAGGT-1     3  0.0000     0.8494 0.00 0.00 1.00 0.00
#> TGCCCAACCGCATA-1     1  0.2345     0.8907 0.90 0.00 0.00 0.10
#> TGCGTAGATGGTCA-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> TGGAAAGAGGTCAT-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> TGGACCCTGGTACT-1     4  0.2411     0.6735 0.00 0.04 0.04 0.92
#> TGGCACCTTCAGTG-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> TGTAACCTTGCCTC-1     2  0.5987     0.0111 0.00 0.52 0.04 0.44
#> TGTACTTGCTCTAT-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> TGTAGGTGCTCTAT-1     3  0.0000     0.8494 0.00 0.00 1.00 0.00
#> TGTCAGGAGATGAA-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> TGTGAGACTGTCAG-1     1  0.4790     0.5273 0.62 0.00 0.00 0.38
#> TGTGAGTGAGTGCT-1     4  0.4855     0.0804 0.40 0.00 0.00 0.60
#> TGTTACACCGCATA-1     1  0.4948     0.4043 0.56 0.00 0.00 0.44
#> TTACTCGACGCAAT-1     3  0.0000     0.8494 0.00 0.00 1.00 0.00
#> TTAGCTACTGTCCC-1     4  0.4277     0.5424 0.00 0.00 0.28 0.72
#> TTAGGGTGTCCTGC-1     4  0.3247     0.6747 0.00 0.06 0.06 0.88
#> TTATCCGAGAAAGT-1     4  0.4624     0.4704 0.00 0.34 0.00 0.66
#> TTATGGCTTATGGC-1     3  0.0000     0.8494 0.00 0.00 1.00 0.00
#> TTATTCCTATGCTG-1     2  0.6840     0.3593 0.00 0.60 0.18 0.22
#> TTCAACACGGACGA-1     1  0.1637     0.9147 0.94 0.00 0.00 0.06
#> TTCACAACCCGTTC-1     2  0.1411     0.8745 0.00 0.96 0.02 0.02
#> TTCCTAGACTAGTG-1     1  0.1211     0.9243 0.96 0.00 0.00 0.04
#> TTCGAGGATAGAAG-1     1  0.4406     0.6640 0.70 0.00 0.00 0.30
#> TTCGTATGTCCTTA-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> TTCTAGTGGTCACA-1     4  0.5793     0.4159 0.00 0.04 0.36 0.60
#> TTCTTACTCTGGAT-1     1  0.2011     0.9046 0.92 0.00 0.00 0.08
#> TTGAATGAACTACG-1     1  0.2921     0.8585 0.86 0.00 0.00 0.14
#> TTGAGGACTACGCA-1     3  0.0000     0.8494 0.00 0.00 1.00 0.00
#> TTGCTAACACGCTA-1     4  0.1637     0.6239 0.06 0.00 0.00 0.94
#> TTGCTATGGTACGT-1     2  0.0000     0.9002 0.00 1.00 0.00 0.00
#> TTGCTATGGTAGGG-1     1  0.0000     0.9389 1.00 0.00 0.00 0.00
#> TTGGTACTACTGGT-1     4  0.4553     0.6348 0.00 0.04 0.18 0.78
#> TTTATCCTGTTGTG-1     4  0.6976     0.5195 0.00 0.18 0.24 0.58

Heatmaps for the consensus matrix. It visualizes the probability of two samples to be in a same group.

consensus_heatmap(res, k = 2)

plot of chunk tab-node-022-consensus-heatmap-1

consensus_heatmap(res, k = 3)

plot of chunk tab-node-022-consensus-heatmap-2

consensus_heatmap(res, k = 4)

plot of chunk tab-node-022-consensus-heatmap-3

Heatmaps for the membership of samples in all partitions to see how consistent they are:

membership_heatmap(res, k = 2)

plot of chunk tab-node-022-membership-heatmap-1

membership_heatmap(res, k = 3)

plot of chunk tab-node-022-membership-heatmap-2

membership_heatmap(res, k = 4)

plot of chunk tab-node-022-membership-heatmap-3

As soon as the classes for columns are determined, the signatures that are significantly different between subgroups can be looked for. Following are the heatmaps for signatures.

Signature heatmaps where rows are scaled:

get_signatures(res, k = 2)

plot of chunk tab-node-022-get-signatures-1

get_signatures(res, k = 3)

plot of chunk tab-node-022-get-signatures-2

get_signatures(res, k = 4)

plot of chunk tab-node-022-get-signatures-3

Signature heatmaps where rows are not scaled:

get_signatures(res, k = 2, scale_rows = FALSE)

plot of chunk tab-node-022-get-signatures-no-scale-1

get_signatures(res, k = 3, scale_rows = FALSE)

plot of chunk tab-node-022-get-signatures-no-scale-2

get_signatures(res, k = 4, scale_rows = FALSE)

plot of chunk tab-node-022-get-signatures-no-scale-3

Compare the overlap of signatures from different k:

compare_signatures(res)

plot of chunk node-022-signature_compare

get_signature() returns a data frame invisibly. To get the list of signatures, the function call should be assigned to a variable explicitly. In following code, if plot argument is set to FALSE, no heatmap is plotted while only the differential analysis is performed.

# code only for demonstration
tb = get_signature(res, k = ..., plot = FALSE)

An example of the output of tb is:

#>   which_row         fdr    mean_1    mean_2 scaled_mean_1 scaled_mean_2 km
#> 1        38 0.042760348  8.373488  9.131774    -0.5533452     0.5164555  1
#> 2        40 0.018707592  7.106213  8.469186    -0.6173731     0.5762149  1
#> 3        55 0.019134737 10.221463 11.207825    -0.6159697     0.5749050  1
#> 4        59 0.006059896  5.921854  7.869574    -0.6899429     0.6439467  1
#> 5        60 0.018055526  8.928898 10.211722    -0.6204761     0.5791110  1
#> 6        98 0.009384629 15.714769 14.887706     0.6635654    -0.6193277  2
...

The columns in tb are:

  1. which_row: row indices corresponding to the input matrix.
  2. fdr: FDR for the differential test.
  3. mean_x: The mean value in group x.
  4. scaled_mean_x: The mean value in group x after rows are scaled.
  5. km: Row groups if k-means clustering is applied to rows (which is done by automatically selecting number of clusters).

If there are too many signatures, top_signatures = ... can be set to only show the signatures with the highest FDRs:

# code only for demonstration
# e.g. to show the top 500 most significant rows
tb = get_signature(res, k = ..., top_signatures = 500)

If the signatures are defined as these which are uniquely high in current group, diff_method argument can be set to "uniquely_high_in_one_group":

# code only for demonstration
tb = get_signature(res, k = ..., diff_method = "uniquely_high_in_one_group")

UMAP plot which shows how samples are separated.

dimension_reduction(res, k = 2, method = "UMAP")

plot of chunk tab-node-022-dimension-reduction-1

dimension_reduction(res, k = 3, method = "UMAP")

plot of chunk tab-node-022-dimension-reduction-2

dimension_reduction(res, k = 4, method = "UMAP")

plot of chunk tab-node-022-dimension-reduction-3

Following heatmap shows how subgroups are split when increasing k:

collect_classes(res)

plot of chunk node-022-collect-classes

Test correlation between subgroups and known annotations. If the known annotation is numeric, one-way ANOVA test is applied, and if the known annotation is discrete, chi-squared contingency table test is applied.

test_to_known_factors(res)
#>             n_sample Seurat_class(p-value) k
#> ATC:skmeans      300              2.05e-56 2
#> ATC:skmeans      293              1.62e-64 3
#> ATC:skmeans      261              4.11e-86 4

If matrix rows can be associated to genes, consider to use functional_enrichment(res, ...) to perform function enrichment for the signature genes. See this vignette for more detailed explanations.


Node03

Parent node: Node0. Child nodes: Node021 , Node022 , Node031-leaf , Node032-leaf , Node041-leaf , Node042-leaf .

The object with results only for a single top-value method and a single partitioning method can be extracted as:

res = res_rh["03"]

A summary of res and all the functions that can be applied to it:

res
#> A 'ConsensusPartition' object with k = 2, 3, 4.
#>   On a matrix with 3477 rows and 365 columns.
#>   Top rows (348) are extracted by 'ATC' method.
#>   Subgroups are detected by 'skmeans' method.
#>   Performed in total 150 partitions by row resampling.
#>   Best k for subgroups seems to be 3.
#> 
#> Following methods can be applied to this 'ConsensusPartition' object:
#>  [1] "cola_report"             "collect_classes"         "collect_plots"          
#>  [4] "collect_stats"           "colnames"                "compare_partitions"     
#>  [7] "compare_signatures"      "consensus_heatmap"       "dimension_reduction"    
#> [10] "functional_enrichment"   "get_anno_col"            "get_anno"               
#> [13] "get_classes"             "get_consensus"           "get_matrix"             
#> [16] "get_membership"          "get_param"               "get_signatures"         
#> [19] "get_stats"               "is_best_k"               "is_stable_k"            
#> [22] "membership_heatmap"      "ncol"                    "nrow"                   
#> [25] "plot_ecdf"               "predict_classes"         "rownames"               
#> [28] "select_partition_number" "show"                    "suggest_best_k"         
#> [31] "test_to_known_factors"   "top_rows_heatmap"

collect_plots() function collects all the plots made from res for all k (number of subgroups) into one single page to provide an easy and fast comparison between different k.

collect_plots(res)

plot of chunk node-03-collect-plots

The plots are:

All the plots in panels can be made by individual functions and they are plotted later in this section.

select_partition_number() produces several plots showing different statistics for choosing “optimized” k. There are following statistics:

The detailed explanations of these statistics can be found in the cola vignette.

Generally speaking, higher 1-PAC score, higher mean silhouette score or higher concordance corresponds to better partition. Rand index and Jaccard index measure how similar the current partition is compared to partition with k-1. If they are too similar, we won't accept k is better than k-1.

select_partition_number(res)

plot of chunk node-03-select-partition-number

The numeric values for all these statistics can be obtained by get_stats().

get_stats(res)
#>   k 1-PAC mean_silhouette concordance area_increased  Rand Jaccard
#> 2 2 1.000           0.973       0.989          0.495 0.506   0.506
#> 3 3 0.958           0.934       0.966          0.197 0.882   0.772
#> 4 4 0.687           0.696       0.851          0.159 0.861   0.675

suggest_best_k() suggests the best \(k\) based on these statistics. The rules are as follows:

suggest_best_k(res)
#> [1] 3
#> attr(,"optional")
#> [1] 2

There is also optional best \(k\) = 2 that is worth to check.

Following is the table of the partitions (You need to click the show/hide code output link to see it). The membership matrix (columns with name p*) is inferred by clue::cl_consensus() function with the SE method. Basically the value in the membership matrix represents the probability to belong to a certain group. The finall subgroup label for an item is determined with the group with highest probability it belongs to.

In get_classes() function, the entropy is calculated from the membership matrix and the silhouette score is calculated from the consensus matrix.

show/hide code output

cbind(get_classes(res, k = 2), get_membership(res, k = 2))
#>                  class entropy silhouette   p1   p2
#> AAACCGTGTATGCG-1     2   0.000   9.89e-01 0.00 1.00
#> AAACGCTGTAGCCA-1     1   0.000   9.88e-01 1.00 0.00
#> AAATGTTGCCACAA-1     1   0.000   9.88e-01 1.00 0.00
#> AAATTCGATTCTCA-1     1   0.000   9.88e-01 1.00 0.00
#> AACCTTACGCGAGA-1     2   0.000   9.89e-01 0.00 1.00
#> AACGCCCTCGTACA-1     2   0.000   9.89e-01 0.00 1.00
#> AACGCCCTGGCATT-1     1   0.000   9.88e-01 1.00 0.00
#> AACGTCGAGTATCG-1     2   0.000   9.89e-01 0.00 1.00
#> AACTCGGAAAGTGA-1     1   0.000   9.88e-01 1.00 0.00
#> AAGATTACCTCAAG-1     2   0.000   9.89e-01 0.00 1.00
#> AAGCAAGAGCTTAG-1     1   0.971   3.35e-01 0.60 0.40
#> AAGCAAGAGGTGTT-1     2   0.000   9.89e-01 0.00 1.00
#> AAGGCTTGCGAACT-1     1   0.000   9.88e-01 1.00 0.00
#> AAGTAGGATACAGC-1     2   0.000   9.89e-01 0.00 1.00
#> AAGTCTCTCGGAGA-1     1   0.000   9.88e-01 1.00 0.00
#> AATACTGAAAGGGC-1     1   0.000   9.88e-01 1.00 0.00
#> AATACTGAATTGGC-1     2   0.000   9.89e-01 0.00 1.00
#> AATAGGGAGAATGA-1     1   0.000   9.88e-01 1.00 0.00
#> AATCCTTGGTGAGG-1     2   0.000   9.89e-01 0.00 1.00
#> AATCGGTGGAACTC-1     1   0.000   9.88e-01 1.00 0.00
#> AATCTCTGCTTTAC-1     2   0.242   9.51e-01 0.04 0.96
#> AATGATACACCAAC-1     1   0.000   9.88e-01 1.00 0.00
#> AATGGCTGTAAAGG-1     1   0.000   9.88e-01 1.00 0.00
#> AATGGCTGTACTCT-1     1   0.000   9.88e-01 1.00 0.00
#> ACAAATTGTTGCGA-1     2   0.000   9.89e-01 0.00 1.00
#> ACAACCGAGGGATG-1     1   0.242   9.50e-01 0.96 0.04
#> ACAATTGACTGACA-1     1   0.000   9.88e-01 1.00 0.00
#> ACAATTGATGACTG-1     2   0.000   9.89e-01 0.00 1.00
#> ACACAGACCATACG-1     1   0.000   9.88e-01 1.00 0.00
#> ACACCCTGGTGTTG-1     2   0.000   9.89e-01 0.00 1.00
#> ACACGATGACGCAT-1     1   0.000   9.88e-01 1.00 0.00
#> ACAGACACGGCATT-1     1   0.000   9.88e-01 1.00 0.00
#> ACAGGTACTGGTGT-1     2   0.000   9.89e-01 0.00 1.00
#> ACAGTCGACCGATA-1     1   0.000   9.88e-01 1.00 0.00
#> ACCACGCTACCCAA-1     1   0.000   9.88e-01 1.00 0.00
#> ACCATTACGAGATA-1     1   0.000   9.88e-01 1.00 0.00
#> ACCCAAGAACTGTG-1     1   0.000   9.88e-01 1.00 0.00
#> ACCCACTGGTTCAG-1     2   0.000   9.89e-01 0.00 1.00
#> ACCCTCGACCTATT-1     1   0.000   9.88e-01 1.00 0.00
#> ACCTGGCTAAGTAG-1     2   0.000   9.89e-01 0.00 1.00
#> ACGAACACCTTGTT-1     2   0.000   9.89e-01 0.00 1.00
#> ACGATCGAGGACTT-1     1   0.000   9.88e-01 1.00 0.00
#> ACGATTCTACGGGA-1     1   0.000   9.88e-01 1.00 0.00
#> ACGCAATGGTTCAG-1     2   0.000   9.89e-01 0.00 1.00
#> ACGCGGTGTTTGCT-1     1   0.000   9.88e-01 1.00 0.00
#> ACGCTGCTGTTCTT-1     2   0.000   9.89e-01 0.00 1.00
#> ACGGAACTCAGATC-1     2   0.000   9.89e-01 0.00 1.00
#> ACGGTAACCGCTAA-1     1   0.000   9.88e-01 1.00 0.00
#> ACGGTAACCTTCGC-1     1   0.000   9.88e-01 1.00 0.00
#> ACGTCGCTCCTGAA-1     2   0.000   9.89e-01 0.00 1.00
#> ACGTGATGTGACAC-1     2   0.000   9.89e-01 0.00 1.00
#> ACGTGCCTTCTATC-1     1   0.000   9.88e-01 1.00 0.00
#> ACGTTGGAAACCTG-1     1   0.000   9.88e-01 1.00 0.00
#> ACGTTGGAGCCAAT-1     2   0.000   9.89e-01 0.00 1.00
#> ACTATCACCTTGGA-1     1   0.000   9.88e-01 1.00 0.00
#> ACTGAGACAACCAC-1     1   0.000   9.88e-01 1.00 0.00
#> ACTGCCACACACGT-1     1   0.000   9.88e-01 1.00 0.00
#> ACTGCCACTCCGTC-1     2   0.000   9.89e-01 0.00 1.00
#> ACTGGCCTTCAGTG-1     2   0.000   9.89e-01 0.00 1.00
#> ACTGTGGACGTGTA-1     1   0.000   9.88e-01 1.00 0.00
#> ACTTCAACAAGCAA-1     1   0.000   9.88e-01 1.00 0.00
#> ACTTCAACGTAGGG-1     2   0.000   9.89e-01 0.00 1.00
#> AGAACAGAAATGCC-1     2   0.000   9.89e-01 0.00 1.00
#> AGAATGGAAGAAGT-1     1   0.000   9.88e-01 1.00 0.00
#> AGATATACCCGTAA-1     2   0.000   9.89e-01 0.00 1.00
#> AGATTCCTGTTCAG-1     2   0.000   9.89e-01 0.00 1.00
#> AGCATGACGATGAA-1     1   0.000   9.88e-01 1.00 0.00
#> AGCCACCTGGATCT-1     1   0.000   9.88e-01 1.00 0.00
#> AGCCTCTGCCAATG-1     2   0.000   9.89e-01 0.00 1.00
#> AGCGATTGAGATCC-1     2   0.000   9.89e-01 0.00 1.00
#> AGGAACCTTGCCTC-1     1   0.000   9.88e-01 1.00 0.00
#> AGGATAGAGGATTC-1     1   0.000   9.88e-01 1.00 0.00
#> AGGATGCTTTAGGC-1     2   0.000   9.89e-01 0.00 1.00
#> AGGGACGAGTCAAC-1     2   0.000   9.89e-01 0.00 1.00
#> AGGGACGATGCATG-1     1   0.000   9.88e-01 1.00 0.00
#> AGGGCGCTATGGTC-1     1   0.000   9.88e-01 1.00 0.00
#> AGGGTGGAGTTGCA-1     1   0.000   9.88e-01 1.00 0.00
#> AGTAATACATCACG-1     1   0.000   9.88e-01 1.00 0.00
#> AGTACTCTCAACCA-1     1   0.000   9.88e-01 1.00 0.00
#> AGTCACGATGAGCT-1     1   0.000   9.88e-01 1.00 0.00
#> AGTCAGACTAGAGA-1     1   0.000   9.88e-01 1.00 0.00
#> AGTCTTACTTCGGA-1     2   0.000   9.89e-01 0.00 1.00
#> AGTTCTTGAAGCCT-1     1   0.000   9.88e-01 1.00 0.00
#> AGTTTCACGGTCTA-1     1   0.469   8.85e-01 0.90 0.10
#> AGTTTGCTACTGGT-1     1   0.000   9.88e-01 1.00 0.00
#> ATACCACTGCCAAT-1     1   0.000   9.88e-01 1.00 0.00
#> ATACTCTGGTATGC-1     2   0.000   9.89e-01 0.00 1.00
#> ATCAACCTTCTCTA-1     1   0.000   9.88e-01 1.00 0.00
#> ATCATCTGACACCA-1     2   0.000   9.89e-01 0.00 1.00
#> ATCATGCTAGAGTA-1     1   0.000   9.88e-01 1.00 0.00
#> ATCCCGTGCAGTCA-1     2   0.000   9.89e-01 0.00 1.00
#> ATCCTAACGCTACA-1     1   0.000   9.88e-01 1.00 0.00
#> ATCGAGTGGACGTT-1     1   0.000   9.88e-01 1.00 0.00
#> ATCGCCACTGAGGG-1     1   0.000   9.88e-01 1.00 0.00
#> ATCTTTCTTGTCCC-1     2   0.000   9.89e-01 0.00 1.00
#> ATGAAGGAACAGCT-1     1   0.000   9.88e-01 1.00 0.00
#> ATGAAGGACTTGCC-1     2   0.000   9.89e-01 0.00 1.00
#> ATGATAACTTCACT-1     2   0.000   9.89e-01 0.00 1.00
#> ATGATATGGTGCTA-1     2   0.000   9.89e-01 0.00 1.00
#> ATGGACACGCATCA-1     2   0.000   9.89e-01 0.00 1.00
#> ATGGGTACATCGGT-1     2   0.000   9.89e-01 0.00 1.00
#> ATGTACCTTTCACT-1     1   0.000   9.88e-01 1.00 0.00
#> ATTAACGATGAGAA-1     2   0.141   9.71e-01 0.02 0.98
#> ATTAACGATGCAAC-1     1   0.000   9.88e-01 1.00 0.00
#> ATTCAGCTCATTGG-1     2   0.000   9.89e-01 0.00 1.00
#> ATTCCAACTTAGGC-1     2   0.795   6.85e-01 0.24 0.76
#> ATTCGACTCACTAG-1     1   0.000   9.88e-01 1.00 0.00
#> ATTTCGTGTATGGC-1     1   0.000   9.88e-01 1.00 0.00
#> CAAAGCACGGTAAA-1     2   0.000   9.89e-01 0.00 1.00
#> CAACGTGAGCCATA-1     1   0.000   9.88e-01 1.00 0.00
#> CAAGAAGACCACAA-1     1   0.000   9.88e-01 1.00 0.00
#> CAAGCTGATCTATC-1     1   0.242   9.50e-01 0.96 0.04
#> CAAGGACTTCTTTG-1     1   0.000   9.88e-01 1.00 0.00
#> CAAGGTTGTCTGGA-1     2   0.000   9.89e-01 0.00 1.00
#> CAATATGACCTTCG-1     1   0.000   9.88e-01 1.00 0.00
#> CAATCTACTGACTG-1     2   0.000   9.89e-01 0.00 1.00
#> CAATTCACCCAACA-1     1   0.000   9.88e-01 1.00 0.00
#> CACATACTACAGCT-1     1   0.000   9.88e-01 1.00 0.00
#> CACCACTGGCGAAG-1     1   0.000   9.88e-01 1.00 0.00
#> CACCCATGTTCTGT-1     1   0.000   9.88e-01 1.00 0.00
#> CACCGGGACGAGAG-1     1   0.000   9.88e-01 1.00 0.00
#> CACCGGGACTTCTA-1     2   0.634   8.07e-01 0.16 0.84
#> CACCGGGACTTGCC-1     1   0.000   9.88e-01 1.00 0.00
#> CACCGGGATTCGGA-1     1   0.000   9.88e-01 1.00 0.00
#> CACCTGACACCCAA-1     1   0.000   9.88e-01 1.00 0.00
#> CACCTGACCTCAAG-1     1   0.000   9.88e-01 1.00 0.00
#> CACGGGTGCTTCGC-1     1   0.000   9.88e-01 1.00 0.00
#> CACGGGTGGAGGAC-1     1   0.827   6.48e-01 0.74 0.26
#> CACTATACGTTTGG-1     1   0.000   9.88e-01 1.00 0.00
#> CACTTTGACTCTAT-1     1   0.000   9.88e-01 1.00 0.00
#> CAGATGACATTCTC-1     2   0.000   9.89e-01 0.00 1.00
#> CAGCAATGGAGGGT-1     2   0.000   9.89e-01 0.00 1.00
#> CAGCGGACCTTTAC-1     2   0.000   9.89e-01 0.00 1.00
#> CAGCTCTGCAAGCT-1     1   0.000   9.88e-01 1.00 0.00
#> CAGCTCTGTGTGGT-1     2   0.000   9.89e-01 0.00 1.00
#> CAGTGATGGCTAAC-1     2   0.943   4.38e-01 0.36 0.64
#> CAGTTTACACACGT-1     2   0.855   6.11e-01 0.28 0.72
#> CATCAGGACTTCCG-1     2   0.000   9.89e-01 0.00 1.00
#> CATCAGGATAGCCA-1     2   0.000   9.89e-01 0.00 1.00
#> CATGAGACGTTGAC-1     2   0.000   9.89e-01 0.00 1.00
#> CATGTACTATCGTG-1     1   0.000   9.88e-01 1.00 0.00
#> CATGTTACAGTCGT-1     1   0.000   9.88e-01 1.00 0.00
#> CATTACACCAACTG-1     2   0.000   9.89e-01 0.00 1.00
#> CATTTCGACTCTAT-1     1   0.000   9.88e-01 1.00 0.00
#> CATTTCGAGATACC-1     2   0.000   9.89e-01 0.00 1.00
#> CATTTGACCACACA-1     1   0.000   9.88e-01 1.00 0.00
#> CATTTGACCCTGAA-1     1   0.000   9.88e-01 1.00 0.00
#> CCAACCTGAAGTAG-1     1   0.000   9.88e-01 1.00 0.00
#> CCAAGAACTACTGG-1     1   0.000   9.88e-01 1.00 0.00
#> CCACCATGTCCTGC-1     1   0.000   9.88e-01 1.00 0.00
#> CCGTACACGTCATG-1     1   0.000   9.88e-01 1.00 0.00
#> CCTAAGGAGGGCAA-1     1   0.000   9.88e-01 1.00 0.00
#> CCTCGAACACTTTC-1     2   0.000   9.89e-01 0.00 1.00
#> CGAAGGGAAACCTG-1     1   0.000   9.88e-01 1.00 0.00
#> CGACCACTAAAGTG-1     2   0.000   9.89e-01 0.00 1.00
#> CGACCACTGCCAAT-1     2   0.000   9.89e-01 0.00 1.00
#> CGAGAACTAAGGCG-1     1   0.000   9.88e-01 1.00 0.00
#> CGAGATTGGACACT-1     1   0.000   9.88e-01 1.00 0.00
#> CGAGATTGGCCATA-1     1   0.000   9.88e-01 1.00 0.00
#> CGAGGCACCTATGG-1     1   0.000   9.88e-01 1.00 0.00
#> CGAGGCTGACGCTA-1     2   0.000   9.89e-01 0.00 1.00
#> CGATACGACAGGAG-1     1   0.680   7.80e-01 0.82 0.18
#> CGATCAGAAGAACA-1     1   0.000   9.88e-01 1.00 0.00
#> CGATCCACCGGGAA-1     1   0.000   9.88e-01 1.00 0.00
#> CGCCGAGAGCTTAG-1     2   0.000   9.89e-01 0.00 1.00
#> CGCTACTGTTCCCG-1     1   0.000   9.88e-01 1.00 0.00
#> CGGACCGATGCGTA-1     1   0.000   9.88e-01 1.00 0.00
#> CGGACTCTCCTCGT-1     2   0.000   9.89e-01 0.00 1.00
#> CGGCCAGAGAGGCA-1     1   0.000   9.88e-01 1.00 0.00
#> CGGCGAACGACAAA-1     2   0.000   9.89e-01 0.00 1.00
#> CGGCGAACTACTTC-1     2   0.000   9.89e-01 0.00 1.00
#> CGGGACTGGAATAG-1     1   0.000   9.88e-01 1.00 0.00
#> CGGGCATGACCCAA-1     1   0.000   9.88e-01 1.00 0.00
#> CGGGCATGTCTCTA-1     1   0.000   9.88e-01 1.00 0.00
#> CGTACCTGGCATCA-1     2   0.000   9.89e-01 0.00 1.00
#> CGTCAAGACAGGAG-1     1   0.000   9.88e-01 1.00 0.00
#> CGTGTAGACGATAC-1     1   0.141   9.70e-01 0.98 0.02
#> CGTGTAGAGTTACG-1     2   0.000   9.89e-01 0.00 1.00
#> CGTGTAGATTCGGA-1     2   0.000   9.89e-01 0.00 1.00
#> CGTTATACCCTGAA-1     1   0.000   9.88e-01 1.00 0.00
#> CTAAACCTCTGACA-1     2   0.000   9.89e-01 0.00 1.00
#> CTAACGGAACCGAT-1     2   0.000   9.89e-01 0.00 1.00
#> CTACAACTCCCGTT-1     1   0.000   9.88e-01 1.00 0.00
#> CTACGCACTGGTCA-1     2   0.000   9.89e-01 0.00 1.00
#> CTACTCCTATGTCG-1     2   0.000   9.89e-01 0.00 1.00
#> CTAGAGACAGCATC-1     1   0.000   9.88e-01 1.00 0.00
#> CTAGTTACGAAACA-1     2   0.000   9.89e-01 0.00 1.00
#> CTATACTGCTACGA-1     2   0.000   9.89e-01 0.00 1.00
#> CTATACTGTCTCAT-1     2   0.000   9.89e-01 0.00 1.00
#> CTCGACTGGTTGAC-1     2   0.000   9.89e-01 0.00 1.00
#> CTCGAGCTCTGGAT-1     2   0.000   9.89e-01 0.00 1.00
#> CTGACAGAATCGTG-1     1   0.000   9.88e-01 1.00 0.00
#> CTGAGAACGTAAAG-1     2   0.000   9.89e-01 0.00 1.00
#> CTGCCAACTGCTCC-1     1   0.000   9.88e-01 1.00 0.00
#> CTGCGACTCCACCT-1     1   0.000   9.88e-01 1.00 0.00
#> CTGGAAACAAACGA-1     1   0.000   9.88e-01 1.00 0.00
#> CTGGATGACTGGAT-1     1   0.000   9.88e-01 1.00 0.00
#> CTGTGAGACCTTGC-1     1   0.000   9.88e-01 1.00 0.00
#> CTTGATTGAGGTTC-1     1   0.141   9.70e-01 0.98 0.02
#> CTTTAGTGACGGGA-1     2   0.000   9.89e-01 0.00 1.00
#> GAAATACTTCCTCG-1     1   0.000   9.88e-01 1.00 0.00
#> GAACCAACTTCCGC-1     2   0.000   9.89e-01 0.00 1.00
#> GAAGCTACGGTTTG-1     1   0.000   9.88e-01 1.00 0.00
#> GAAGGTCTGAAAGT-1     1   0.000   9.88e-01 1.00 0.00
#> GAAGTAGACTCCCA-1     1   0.000   9.88e-01 1.00 0.00
#> GAAGTGCTAAACGA-1     2   0.000   9.89e-01 0.00 1.00
#> GAATGCACCTTCGC-1     2   0.000   9.89e-01 0.00 1.00
#> GAATTAACGTCGTA-1     2   0.000   9.89e-01 0.00 1.00
#> GACGCTCTCTCTCG-1     2   0.000   9.89e-01 0.00 1.00
#> GACGGCACACGGGA-1     2   0.000   9.89e-01 0.00 1.00
#> GAGATGCTCTGGAT-1     1   0.000   9.88e-01 1.00 0.00
#> GAGCAGGATTCCCG-1     1   0.000   9.88e-01 1.00 0.00
#> GAGCGCTGAAGATG-1     2   0.000   9.89e-01 0.00 1.00
#> GAGGCAGACTTGCC-1     1   0.000   9.88e-01 1.00 0.00
#> GAGGTACTGACACT-1     2   0.242   9.51e-01 0.04 0.96
#> GAGGTGGATCCTCG-1     2   0.000   9.89e-01 0.00 1.00
#> GAGTGACTCAGCTA-1     1   0.000   9.88e-01 1.00 0.00
#> GAGTGACTCGGTAT-1     1   0.000   9.88e-01 1.00 0.00
#> GAGTTGTGCTGAGT-1     1   0.000   9.88e-01 1.00 0.00
#> GAGTTGTGGTAGCT-1     2   0.000   9.89e-01 0.00 1.00
#> GATAGAGAAGGGTG-1     1   0.000   9.88e-01 1.00 0.00
#> GATATATGTCCGTC-1     1   0.000   9.88e-01 1.00 0.00
#> GATATTGACAGGAG-1     1   0.000   9.88e-01 1.00 0.00
#> GATCCCTGACCTTT-1     2   0.000   9.89e-01 0.00 1.00
#> GATCCCTGTGTAGC-1     1   0.000   9.88e-01 1.00 0.00
#> GCACACCTGTGCTA-1     2   0.000   9.89e-01 0.00 1.00
#> GCACCACTTCCTTA-1     2   0.000   9.89e-01 0.00 1.00
#> GCACTAGAGTCGTA-1     1   0.000   9.88e-01 1.00 0.00
#> GCAGGGCTATCGAC-1     2   0.000   9.89e-01 0.00 1.00
#> GCAGGGCTTGGGAG-1     1   0.000   9.88e-01 1.00 0.00
#> GCCAAAACGAGGCA-1     1   0.000   9.88e-01 1.00 0.00
#> GCCCAACTATGGTC-1     1   0.000   9.88e-01 1.00 0.00
#> GCCCATACAGCGTT-1     1   0.000   9.88e-01 1.00 0.00
#> GCCGGAACGAACTC-1     1   0.000   9.88e-01 1.00 0.00
#> GCCGGAACGTTCTT-1     2   0.000   9.89e-01 0.00 1.00
#> GCCGGAACTGCACA-1     2   0.000   9.89e-01 0.00 1.00
#> GCCTACACAGTTCG-1     2   0.000   9.89e-01 0.00 1.00
#> GCCTCAACTCTTTG-1     1   0.000   9.88e-01 1.00 0.00
#> GCGCATCTTGCTCC-1     2   0.000   9.89e-01 0.00 1.00
#> GCGCGATGGTGCAT-1     2   0.000   9.89e-01 0.00 1.00
#> GCTAGATGGCGATT-1     1   0.000   9.88e-01 1.00 0.00
#> GCTATACTAGCGTT-1     1   0.000   9.88e-01 1.00 0.00
#> GCTCCATGAGAAGT-1     1   0.995   1.49e-01 0.54 0.46
#> GCTTAACTACTGGT-1     1   0.000   9.88e-01 1.00 0.00
#> GGAACACTTCAGAC-1     2   0.000   9.89e-01 0.00 1.00
#> GGAAGGTGGCGAGA-1     2   0.000   9.89e-01 0.00 1.00
#> GGACCTCTTTTCTG-1     1   0.000   9.88e-01 1.00 0.00
#> GGACGCTGTCCTCG-1     2   0.000   9.89e-01 0.00 1.00
#> GGAGGCCTCGTTGA-1     2   0.000   9.89e-01 0.00 1.00
#> GGATGTACGTGTCA-1     1   0.000   9.88e-01 1.00 0.00
#> GGCAAGGAAAAAGC-1     2   0.000   9.89e-01 0.00 1.00
#> GGCATATGCTTATC-1     2   0.141   9.71e-01 0.02 0.98
#> GGCATATGGGGAGT-1     2   0.000   9.89e-01 0.00 1.00
#> GGCCGAACTCTAGG-1     2   0.000   9.89e-01 0.00 1.00
#> GGCGACACTGCCCT-1     1   0.000   9.88e-01 1.00 0.00
#> GGCGGACTAGGAGC-1     1   0.000   9.88e-01 1.00 0.00
#> GGCGGACTCTTGGA-1     1   0.000   9.88e-01 1.00 0.00
#> GGCTAAACACCTGA-1     1   0.000   9.88e-01 1.00 0.00
#> GGCTAATGAGCACT-1     1   0.000   9.88e-01 1.00 0.00
#> GGGACCACACGTTG-1     1   0.000   9.88e-01 1.00 0.00
#> GGGTTAACGTGCAT-1     2   0.000   9.89e-01 0.00 1.00
#> GGTAAAGAGCTAAC-1     1   0.000   9.88e-01 1.00 0.00
#> GGTGGAGAAACGGG-1     1   0.000   9.88e-01 1.00 0.00
#> GGTGGAGACAGATC-1     2   0.000   9.89e-01 0.00 1.00
#> GGTGGAGATTACTC-1     1   0.000   9.88e-01 1.00 0.00
#> GGTTTACTACGCAT-1     1   0.000   9.88e-01 1.00 0.00
#> GTACCCTGTCCTTA-1     1   0.000   9.88e-01 1.00 0.00
#> GTACGTGAACGTTG-1     1   0.000   9.88e-01 1.00 0.00
#> GTAGTGTGAGCGGA-1     2   0.000   9.89e-01 0.00 1.00
#> GTATCTACAGAAGT-1     1   0.327   9.29e-01 0.94 0.06
#> GTATCTACGACGAG-1     1   0.000   9.88e-01 1.00 0.00
#> GTATTAGAAACAGA-1     1   0.141   9.70e-01 0.98 0.02
#> GTATTCACGGGTGA-1     1   0.000   9.88e-01 1.00 0.00
#> GTCAATCTGTAGCT-1     1   0.000   9.88e-01 1.00 0.00
#> GTCATACTGCGATT-1     2   0.000   9.89e-01 0.00 1.00
#> GTCATACTTCGCCT-1     2   0.000   9.89e-01 0.00 1.00
#> GTCATACTTTACCT-1     1   0.000   9.88e-01 1.00 0.00
#> GTCGACCTGAATGA-1     2   0.000   9.89e-01 0.00 1.00
#> GTGATTCTGGTTCA-1     2   0.000   9.89e-01 0.00 1.00
#> GTGTATCTAGTAGA-1     1   0.000   9.88e-01 1.00 0.00
#> GTGTCAGAAGCGTT-1     1   0.000   9.88e-01 1.00 0.00
#> GTTAAAACCGAGAG-1     2   0.000   9.89e-01 0.00 1.00
#> GTTCAACTGGGACA-1     2   0.000   9.89e-01 0.00 1.00
#> GTTGACGAGCCCTT-1     1   0.000   9.88e-01 1.00 0.00
#> GTTGACGATATCGG-1     2   0.000   9.89e-01 0.00 1.00
#> GTTGATCTTTTCAC-1     1   0.000   9.88e-01 1.00 0.00
#> GTTTAAGACTGTCC-1     1   0.000   9.88e-01 1.00 0.00
#> TAACACCTTGTTTC-1     2   0.000   9.89e-01 0.00 1.00
#> TAACTCACTCTACT-1     2   0.000   9.89e-01 0.00 1.00
#> TAAGAGGACTTGTT-1     2   0.000   9.89e-01 0.00 1.00
#> TAAGGGCTGCTGTA-1     1   0.402   9.08e-01 0.92 0.08
#> TAATGCCTCGTCTC-1     2   0.000   9.89e-01 0.00 1.00
#> TACGATCTTACGAC-1     1   0.000   9.88e-01 1.00 0.00
#> TACGCAGAGAATCC-1     1   0.000   9.88e-01 1.00 0.00
#> TACGGCCTGGGACA-1     2   0.000   9.89e-01 0.00 1.00
#> TACTACTGATGTCG-1     2   0.000   9.89e-01 0.00 1.00
#> TACTCTGAATCGAC-1     2   0.000   9.89e-01 0.00 1.00
#> TACTGTTGAGGCGA-1     2   0.000   9.89e-01 0.00 1.00
#> TACTTGACTCCTCG-1     1   0.000   9.88e-01 1.00 0.00
#> TAGAAACTGGGATG-1     2   0.000   9.89e-01 0.00 1.00
#> TAGCATCTCAGCTA-1     2   0.000   9.89e-01 0.00 1.00
#> TAGCCCACAGCCAT-1     1   0.000   9.88e-01 1.00 0.00
#> TAGCCCACAGCTAC-1     2   0.000   9.89e-01 0.00 1.00
#> TAGCCGCTTACTTC-1     1   0.000   9.88e-01 1.00 0.00
#> TAGGCATGCTCTCG-1     2   0.990   2.13e-01 0.44 0.56
#> TAGGCATGGCGAGA-1     1   0.000   9.88e-01 1.00 0.00
#> TAGGGACTGAACTC-1     2   0.000   9.89e-01 0.00 1.00
#> TAGGTGTGTTCTGT-1     1   0.000   9.88e-01 1.00 0.00
#> TAGTCTTGTGGAAA-1     1   0.000   9.88e-01 1.00 0.00
#> TAGTGGTGAAGTGA-1     2   0.000   9.89e-01 0.00 1.00
#> TAGTTAGAACCACA-1     2   0.000   9.89e-01 0.00 1.00
#> TATCCAACTCTCTA-1     1   0.000   9.88e-01 1.00 0.00
#> TATCTGACAGGTTC-1     1   0.000   9.88e-01 1.00 0.00
#> TATGAATGGAGGAC-1     2   0.000   9.89e-01 0.00 1.00
#> TATGGGTGCATCAG-1     2   0.000   9.89e-01 0.00 1.00
#> TATTTCCTGGAGGT-1     2   0.000   9.89e-01 0.00 1.00
#> TCAACACTGTTTGG-1     2   0.000   9.89e-01 0.00 1.00
#> TCAAGGACATTCTC-1     1   0.584   8.35e-01 0.86 0.14
#> TCAATCACACTCTT-1     1   0.000   9.88e-01 1.00 0.00
#> TCACCTCTACGACT-1     1   0.000   9.88e-01 1.00 0.00
#> TCACTATGGGGCAA-1     1   0.000   9.88e-01 1.00 0.00
#> TCAGACGACGTTAG-1     2   0.000   9.89e-01 0.00 1.00
#> TCAGTGGAAGATCC-1     1   0.000   9.88e-01 1.00 0.00
#> TCCATCCTCCCTAC-1     1   0.000   9.88e-01 1.00 0.00
#> TCCCGAACACAGTC-1     2   0.000   9.89e-01 0.00 1.00
#> TCCTAAACCGCATA-1     2   0.000   9.89e-01 0.00 1.00
#> TCCTAATGGTTTGG-1     1   1.000   2.69e-05 0.50 0.50
#> TCCTATGAAAAGCA-1     1   0.000   9.88e-01 1.00 0.00
#> TCGAATCTCTGGTA-1     1   0.000   9.88e-01 1.00 0.00
#> TCGAGAACGTTAGC-1     1   0.000   9.88e-01 1.00 0.00
#> TCGATTTGCAGCTA-1     2   0.000   9.89e-01 0.00 1.00
#> TCTAACACCAGTTG-1     2   0.141   9.71e-01 0.02 0.98
#> TCTAAGCTTAGTCG-1     1   0.000   9.88e-01 1.00 0.00
#> TGAATAACTCCCAC-1     2   0.000   9.89e-01 0.00 1.00
#> TGACGCCTTTACTC-1     1   0.000   9.88e-01 1.00 0.00
#> TGATAAACTCCGTC-1     2   0.000   9.89e-01 0.00 1.00
#> TGATCACTAGCATC-1     1   0.000   9.88e-01 1.00 0.00
#> TGCACAGACGACAT-1     2   0.000   9.89e-01 0.00 1.00
#> TGCCACTGCGATAC-1     2   0.000   9.89e-01 0.00 1.00
#> TGCTAGGAAACCGT-1     1   0.000   9.88e-01 1.00 0.00
#> TGCTATACTGCTGA-1     1   0.000   9.88e-01 1.00 0.00
#> TGCTGAGAGAGCAG-1     2   0.000   9.89e-01 0.00 1.00
#> TGGAACACAAACAG-1     2   0.000   9.89e-01 0.00 1.00
#> TGGAGACTTGACCA-1     1   0.000   9.88e-01 1.00 0.00
#> TGGTAGACCCTCAC-1     2   0.000   9.89e-01 0.00 1.00
#> TGTAATGACACAAC-1     2   0.000   9.89e-01 0.00 1.00
#> TGTAATGAGGTAAA-1     2   0.242   9.51e-01 0.04 0.96
#> TGTAGTCTTGCACA-1     1   0.000   9.88e-01 1.00 0.00
#> TGTGACGATTCTCA-1     1   0.000   9.88e-01 1.00 0.00
#> TGTGAGTGGAGATA-1     1   0.000   9.88e-01 1.00 0.00
#> TGTTACTGGCTACA-1     1   0.000   9.88e-01 1.00 0.00
#> TGTTACTGTAGTCG-1     1   0.000   9.88e-01 1.00 0.00
#> TTAACCACTAAGGA-1     1   0.000   9.88e-01 1.00 0.00
#> TTACCATGTGTCTT-1     1   0.000   9.88e-01 1.00 0.00
#> TTACGTACGTTCAG-1     2   0.000   9.89e-01 0.00 1.00
#> TTACTCGATCTACT-1     2   0.000   9.89e-01 0.00 1.00
#> TTAGTCTGCCAACA-1     2   0.000   9.89e-01 0.00 1.00
#> TTCCAAACTCCCAC-1     2   0.000   9.89e-01 0.00 1.00
#> TTCCAAACTTGACG-1     1   0.000   9.88e-01 1.00 0.00
#> TTCCCACTTGAGGG-1     2   0.000   9.89e-01 0.00 1.00
#> TTCGTATGAAAAGC-1     1   0.000   9.88e-01 1.00 0.00
#> TTCGTATGGATAGA-1     1   0.000   9.88e-01 1.00 0.00
#> TTCTAGTGGAGAGC-1     2   0.000   9.89e-01 0.00 1.00
#> TTCTGATGGAGACG-1     2   0.000   9.89e-01 0.00 1.00
#> TTGTCATGGACGGA-1     2   0.000   9.89e-01 0.00 1.00

show/hide code output

cbind(get_classes(res, k = 3), get_membership(res, k = 3))
#>                  class entropy silhouette   p1   p2   p3
#> AAACCGTGTATGCG-1     2  0.2959      0.874 0.00 0.90 0.10
#> AAACGCTGTAGCCA-1     1  0.1529      0.941 0.96 0.00 0.04
#> AAATGTTGCCACAA-1     3  0.1529      0.870 0.04 0.00 0.96
#> AAATTCGATTCTCA-1     1  0.2066      0.948 0.94 0.00 0.06
#> AACCTTACGCGAGA-1     2  0.0000      0.982 0.00 1.00 0.00
#> AACGCCCTCGTACA-1     2  0.0000      0.982 0.00 1.00 0.00
#> AACGCCCTGGCATT-1     3  0.0892      0.878 0.02 0.00 0.98
#> AACGTCGAGTATCG-1     2  0.0000      0.982 0.00 1.00 0.00
#> AACTCGGAAAGTGA-1     1  0.2066      0.948 0.94 0.00 0.06
#> AAGATTACCTCAAG-1     2  0.0000      0.982 0.00 1.00 0.00
#> AAGCAAGAGCTTAG-1     2  0.7029      0.165 0.44 0.54 0.02
#> AAGCAAGAGGTGTT-1     2  0.0000      0.982 0.00 1.00 0.00
#> AAGGCTTGCGAACT-1     1  0.0000      0.966 1.00 0.00 0.00
#> AAGTAGGATACAGC-1     2  0.0000      0.982 0.00 1.00 0.00
#> AAGTCTCTCGGAGA-1     1  0.0000      0.966 1.00 0.00 0.00
#> AATACTGAAAGGGC-1     1  0.2066      0.948 0.94 0.00 0.06
#> AATACTGAATTGGC-1     2  0.0000      0.982 0.00 1.00 0.00
#> AATAGGGAGAATGA-1     1  0.0000      0.966 1.00 0.00 0.00
#> AATCCTTGGTGAGG-1     2  0.0000      0.982 0.00 1.00 0.00
#> AATCGGTGGAACTC-1     1  0.1529      0.955 0.96 0.00 0.04
#> AATCTCTGCTTTAC-1     2  0.2066      0.908 0.06 0.94 0.00
#> AATGATACACCAAC-1     1  0.0000      0.966 1.00 0.00 0.00
#> AATGGCTGTAAAGG-1     1  0.2537      0.931 0.92 0.00 0.08
#> AATGGCTGTACTCT-1     3  0.2066      0.867 0.06 0.00 0.94
#> ACAAATTGTTGCGA-1     2  0.0000      0.982 0.00 1.00 0.00
#> ACAACCGAGGGATG-1     1  0.5334      0.800 0.82 0.12 0.06
#> ACAATTGACTGACA-1     1  0.0000      0.966 1.00 0.00 0.00
#> ACAATTGATGACTG-1     2  0.0000      0.982 0.00 1.00 0.00
#> ACACAGACCATACG-1     1  0.0000      0.966 1.00 0.00 0.00
#> ACACCCTGGTGTTG-1     2  0.0000      0.982 0.00 1.00 0.00
#> ACACGATGACGCAT-1     3  0.6244      0.170 0.44 0.00 0.56
#> ACAGACACGGCATT-1     1  0.2066      0.948 0.94 0.00 0.06
#> ACAGGTACTGGTGT-1     2  0.0000      0.982 0.00 1.00 0.00
#> ACAGTCGACCGATA-1     1  0.2066      0.948 0.94 0.00 0.06
#> ACCACGCTACCCAA-1     1  0.0000      0.966 1.00 0.00 0.00
#> ACCATTACGAGATA-1     3  0.0000      0.882 0.00 0.00 1.00
#> ACCCAAGAACTGTG-1     1  0.0000      0.966 1.00 0.00 0.00
#> ACCCACTGGTTCAG-1     3  0.2066      0.871 0.00 0.06 0.94
#> ACCCTCGACCTATT-1     1  0.2066      0.948 0.94 0.00 0.06
#> ACCTGGCTAAGTAG-1     2  0.0000      0.982 0.00 1.00 0.00
#> ACGAACACCTTGTT-1     2  0.0000      0.982 0.00 1.00 0.00
#> ACGATCGAGGACTT-1     1  0.2066      0.948 0.94 0.00 0.06
#> ACGATTCTACGGGA-1     1  0.0000      0.966 1.00 0.00 0.00
#> ACGCAATGGTTCAG-1     2  0.0892      0.963 0.00 0.98 0.02
#> ACGCGGTGTTTGCT-1     1  0.0000      0.966 1.00 0.00 0.00
#> ACGCTGCTGTTCTT-1     2  0.0000      0.982 0.00 1.00 0.00
#> ACGGAACTCAGATC-1     2  0.0000      0.982 0.00 1.00 0.00
#> ACGGTAACCGCTAA-1     1  0.4555      0.803 0.80 0.00 0.20
#> ACGGTAACCTTCGC-1     1  0.0000      0.966 1.00 0.00 0.00
#> ACGTCGCTCCTGAA-1     2  0.0000      0.982 0.00 1.00 0.00
#> ACGTGATGTGACAC-1     2  0.0000      0.982 0.00 1.00 0.00
#> ACGTGCCTTCTATC-1     1  0.2537      0.904 0.92 0.00 0.08
#> ACGTTGGAAACCTG-1     1  0.2066      0.948 0.94 0.00 0.06
#> ACGTTGGAGCCAAT-1     2  0.0000      0.982 0.00 1.00 0.00
#> ACTATCACCTTGGA-1     1  0.0000      0.966 1.00 0.00 0.00
#> ACTGAGACAACCAC-1     1  0.2066      0.948 0.94 0.00 0.06
#> ACTGCCACACACGT-1     1  0.2066      0.948 0.94 0.00 0.06
#> ACTGCCACTCCGTC-1     2  0.0000      0.982 0.00 1.00 0.00
#> ACTGGCCTTCAGTG-1     2  0.0000      0.982 0.00 1.00 0.00
#> ACTGTGGACGTGTA-1     1  0.1529      0.955 0.96 0.00 0.04
#> ACTTCAACAAGCAA-1     1  0.2537      0.936 0.92 0.00 0.08
#> ACTTCAACGTAGGG-1     2  0.0000      0.982 0.00 1.00 0.00
#> AGAACAGAAATGCC-1     2  0.0000      0.982 0.00 1.00 0.00
#> AGAATGGAAGAAGT-1     1  0.0000      0.966 1.00 0.00 0.00
#> AGATATACCCGTAA-1     2  0.0000      0.982 0.00 1.00 0.00
#> AGATTCCTGTTCAG-1     2  0.0000      0.982 0.00 1.00 0.00
#> AGCATGACGATGAA-1     1  0.0000      0.966 1.00 0.00 0.00
#> AGCCACCTGGATCT-1     1  0.0000      0.966 1.00 0.00 0.00
#> AGCCTCTGCCAATG-1     2  0.0000      0.982 0.00 1.00 0.00
#> AGCGATTGAGATCC-1     2  0.0000      0.982 0.00 1.00 0.00
#> AGGAACCTTGCCTC-1     1  0.2066      0.948 0.94 0.00 0.06
#> AGGATAGAGGATTC-1     1  0.0000      0.966 1.00 0.00 0.00
#> AGGATGCTTTAGGC-1     2  0.0000      0.982 0.00 1.00 0.00
#> AGGGACGAGTCAAC-1     2  0.0000      0.982 0.00 1.00 0.00
#> AGGGACGATGCATG-1     1  0.0000      0.966 1.00 0.00 0.00
#> AGGGCGCTATGGTC-1     3  0.0892      0.880 0.02 0.00 0.98
#> AGGGTGGAGTTGCA-1     1  0.0000      0.966 1.00 0.00 0.00
#> AGTAATACATCACG-1     1  0.2066      0.948 0.94 0.00 0.06
#> AGTACTCTCAACCA-1     1  0.0000      0.966 1.00 0.00 0.00
#> AGTCACGATGAGCT-1     1  0.2066      0.948 0.94 0.00 0.06
#> AGTCAGACTAGAGA-1     1  0.2066      0.948 0.94 0.00 0.06
#> AGTCTTACTTCGGA-1     3  0.2066      0.871 0.00 0.06 0.94
#> AGTTCTTGAAGCCT-1     1  0.0000      0.966 1.00 0.00 0.00
#> AGTTTCACGGTCTA-1     3  0.3832      0.826 0.10 0.02 0.88
#> AGTTTGCTACTGGT-1     1  0.2066      0.948 0.94 0.00 0.06
#> ATACCACTGCCAAT-1     1  0.2066      0.948 0.94 0.00 0.06
#> ATACTCTGGTATGC-1     2  0.0000      0.982 0.00 1.00 0.00
#> ATCAACCTTCTCTA-1     1  0.2066      0.948 0.94 0.00 0.06
#> ATCATCTGACACCA-1     3  0.2066      0.871 0.00 0.06 0.94
#> ATCATGCTAGAGTA-1     1  0.0000      0.966 1.00 0.00 0.00
#> ATCCCGTGCAGTCA-1     2  0.0000      0.982 0.00 1.00 0.00
#> ATCCTAACGCTACA-1     1  0.4002      0.854 0.84 0.00 0.16
#> ATCGAGTGGACGTT-1     1  0.0000      0.966 1.00 0.00 0.00
#> ATCGCCACTGAGGG-1     1  0.0000      0.966 1.00 0.00 0.00
#> ATCTTTCTTGTCCC-1     2  0.0000      0.982 0.00 1.00 0.00
#> ATGAAGGAACAGCT-1     1  0.0000      0.966 1.00 0.00 0.00
#> ATGAAGGACTTGCC-1     2  0.0000      0.982 0.00 1.00 0.00
#> ATGATAACTTCACT-1     2  0.0000      0.982 0.00 1.00 0.00
#> ATGATATGGTGCTA-1     2  0.0000      0.982 0.00 1.00 0.00
#> ATGGACACGCATCA-1     2  0.0000      0.982 0.00 1.00 0.00
#> ATGGGTACATCGGT-1     2  0.0000      0.982 0.00 1.00 0.00
#> ATGTACCTTTCACT-1     1  0.0000      0.966 1.00 0.00 0.00
#> ATTAACGATGAGAA-1     3  0.4796      0.712 0.00 0.22 0.78
#> ATTAACGATGCAAC-1     1  0.0000      0.966 1.00 0.00 0.00
#> ATTCAGCTCATTGG-1     3  0.2066      0.871 0.00 0.06 0.94
#> ATTCCAACTTAGGC-1     2  0.5147      0.678 0.18 0.80 0.02
#> ATTCGACTCACTAG-1     1  0.4291      0.831 0.82 0.00 0.18
#> ATTTCGTGTATGGC-1     1  0.0892      0.961 0.98 0.00 0.02
#> CAAAGCACGGTAAA-1     2  0.0000      0.982 0.00 1.00 0.00
#> CAACGTGAGCCATA-1     1  0.0000      0.966 1.00 0.00 0.00
#> CAAGAAGACCACAA-1     1  0.2959      0.920 0.90 0.00 0.10
#> CAAGCTGATCTATC-1     1  0.3042      0.898 0.92 0.04 0.04
#> CAAGGACTTCTTTG-1     1  0.0000      0.966 1.00 0.00 0.00
#> CAAGGTTGTCTGGA-1     2  0.0000      0.982 0.00 1.00 0.00
#> CAATATGACCTTCG-1     1  0.0000      0.966 1.00 0.00 0.00
#> CAATCTACTGACTG-1     2  0.0000      0.982 0.00 1.00 0.00
#> CAATTCACCCAACA-1     1  0.0000      0.966 1.00 0.00 0.00
#> CACATACTACAGCT-1     1  0.0000      0.966 1.00 0.00 0.00
#> CACCACTGGCGAAG-1     1  0.2066      0.948 0.94 0.00 0.06
#> CACCCATGTTCTGT-1     3  0.6280      0.238 0.46 0.00 0.54
#> CACCGGGACGAGAG-1     1  0.0000      0.966 1.00 0.00 0.00
#> CACCGGGACTTCTA-1     3  0.0000      0.882 0.00 0.00 1.00
#> CACCGGGACTTGCC-1     1  0.0000      0.966 1.00 0.00 0.00
#> CACCGGGATTCGGA-1     1  0.0000      0.966 1.00 0.00 0.00
#> CACCTGACACCCAA-1     1  0.0000      0.966 1.00 0.00 0.00
#> CACCTGACCTCAAG-1     1  0.0000      0.966 1.00 0.00 0.00
#> CACGGGTGCTTCGC-1     1  0.0892      0.955 0.98 0.00 0.02
#> CACGGGTGGAGGAC-1     1  0.6245      0.693 0.76 0.18 0.06
#> CACTATACGTTTGG-1     1  0.0000      0.966 1.00 0.00 0.00
#> CACTTTGACTCTAT-1     1  0.0000      0.966 1.00 0.00 0.00
#> CAGATGACATTCTC-1     2  0.0000      0.982 0.00 1.00 0.00
#> CAGCAATGGAGGGT-1     2  0.0000      0.982 0.00 1.00 0.00
#> CAGCGGACCTTTAC-1     2  0.0000      0.982 0.00 1.00 0.00
#> CAGCTCTGCAAGCT-1     1  0.0000      0.966 1.00 0.00 0.00
#> CAGCTCTGTGTGGT-1     2  0.0000      0.982 0.00 1.00 0.00
#> CAGTGATGGCTAAC-1     2  0.5643      0.627 0.22 0.76 0.02
#> CAGTTTACACACGT-1     2  0.2947      0.889 0.02 0.92 0.06
#> CATCAGGACTTCCG-1     2  0.0000      0.982 0.00 1.00 0.00
#> CATCAGGATAGCCA-1     2  0.0000      0.982 0.00 1.00 0.00
#> CATGAGACGTTGAC-1     2  0.0000      0.982 0.00 1.00 0.00
#> CATGTACTATCGTG-1     1  0.0000      0.966 1.00 0.00 0.00
#> CATGTTACAGTCGT-1     1  0.2066      0.948 0.94 0.00 0.06
#> CATTACACCAACTG-1     2  0.0000      0.982 0.00 1.00 0.00
#> CATTTCGACTCTAT-1     1  0.2537      0.936 0.92 0.00 0.08
#> CATTTCGAGATACC-1     2  0.0000      0.982 0.00 1.00 0.00
#> CATTTGACCACACA-1     1  0.0000      0.966 1.00 0.00 0.00
#> CATTTGACCCTGAA-1     1  0.0892      0.961 0.98 0.00 0.02
#> CCAACCTGAAGTAG-1     1  0.0000      0.966 1.00 0.00 0.00
#> CCAAGAACTACTGG-1     1  0.0000      0.966 1.00 0.00 0.00
#> CCACCATGTCCTGC-1     1  0.0000      0.966 1.00 0.00 0.00
#> CCGTACACGTCATG-1     1  0.0000      0.966 1.00 0.00 0.00
#> CCTAAGGAGGGCAA-1     1  0.5016      0.722 0.76 0.00 0.24
#> CCTCGAACACTTTC-1     2  0.0000      0.982 0.00 1.00 0.00
#> CGAAGGGAAACCTG-1     1  0.1529      0.955 0.96 0.00 0.04
#> CGACCACTAAAGTG-1     2  0.0000      0.982 0.00 1.00 0.00
#> CGACCACTGCCAAT-1     2  0.0000      0.982 0.00 1.00 0.00
#> CGAGAACTAAGGCG-1     1  0.0000      0.966 1.00 0.00 0.00
#> CGAGATTGGACACT-1     1  0.0000      0.966 1.00 0.00 0.00
#> CGAGATTGGCCATA-1     3  0.4796      0.737 0.22 0.00 0.78
#> CGAGGCACCTATGG-1     1  0.0000      0.966 1.00 0.00 0.00
#> CGAGGCTGACGCTA-1     2  0.0000      0.982 0.00 1.00 0.00
#> CGATACGACAGGAG-1     3  0.0000      0.882 0.00 0.00 1.00
#> CGATCAGAAGAACA-1     1  0.0000      0.966 1.00 0.00 0.00
#> CGATCCACCGGGAA-1     1  0.2066      0.948 0.94 0.00 0.06
#> CGCCGAGAGCTTAG-1     2  0.0000      0.982 0.00 1.00 0.00
#> CGCTACTGTTCCCG-1     1  0.0000      0.966 1.00 0.00 0.00
#> CGGACCGATGCGTA-1     1  0.0000      0.966 1.00 0.00 0.00
#> CGGACTCTCCTCGT-1     2  0.0892      0.963 0.00 0.98 0.02
#> CGGCCAGAGAGGCA-1     1  0.0892      0.961 0.98 0.00 0.02
#> CGGCGAACGACAAA-1     2  0.0000      0.982 0.00 1.00 0.00
#> CGGCGAACTACTTC-1     2  0.0000      0.982 0.00 1.00 0.00
#> CGGGACTGGAATAG-1     1  0.0000      0.966 1.00 0.00 0.00
#> CGGGCATGACCCAA-1     3  0.2066      0.867 0.06 0.00 0.94
#> CGGGCATGTCTCTA-1     1  0.2066      0.948 0.94 0.00 0.06
#> CGTACCTGGCATCA-1     2  0.0000      0.982 0.00 1.00 0.00
#> CGTCAAGACAGGAG-1     1  0.2066      0.948 0.94 0.00 0.06
#> CGTGTAGACGATAC-1     1  0.2947      0.934 0.92 0.02 0.06
#> CGTGTAGAGTTACG-1     2  0.0000      0.982 0.00 1.00 0.00
#> CGTGTAGATTCGGA-1     2  0.0000      0.982 0.00 1.00 0.00
#> CGTTATACCCTGAA-1     1  0.0000      0.966 1.00 0.00 0.00
#> CTAAACCTCTGACA-1     2  0.0000      0.982 0.00 1.00 0.00
#> CTAACGGAACCGAT-1     2  0.0000      0.982 0.00 1.00 0.00
#> CTACAACTCCCGTT-1     1  0.0000      0.966 1.00 0.00 0.00
#> CTACGCACTGGTCA-1     2  0.0000      0.982 0.00 1.00 0.00
#> CTACTCCTATGTCG-1     2  0.0000      0.982 0.00 1.00 0.00
#> CTAGAGACAGCATC-1     1  0.0000      0.966 1.00 0.00 0.00
#> CTAGTTACGAAACA-1     2  0.0000      0.982 0.00 1.00 0.00
#> CTATACTGCTACGA-1     2  0.0000      0.982 0.00 1.00 0.00
#> CTATACTGTCTCAT-1     2  0.0000      0.982 0.00 1.00 0.00
#> CTCGACTGGTTGAC-1     2  0.0000      0.982 0.00 1.00 0.00
#> CTCGAGCTCTGGAT-1     3  0.5216      0.652 0.00 0.26 0.74
#> CTGACAGAATCGTG-1     1  0.0000      0.966 1.00 0.00 0.00
#> CTGAGAACGTAAAG-1     2  0.0000      0.982 0.00 1.00 0.00
#> CTGCCAACTGCTCC-1     1  0.0000      0.966 1.00 0.00 0.00
#> CTGCGACTCCACCT-1     1  0.3340      0.892 0.88 0.00 0.12
#> CTGGAAACAAACGA-1     1  0.0000      0.966 1.00 0.00 0.00
#> CTGGATGACTGGAT-1     1  0.0000      0.966 1.00 0.00 0.00
#> CTGTGAGACCTTGC-1     1  0.0000      0.966 1.00 0.00 0.00
#> CTTGATTGAGGTTC-1     1  0.4209      0.831 0.86 0.02 0.12
#> CTTTAGTGACGGGA-1     2  0.0000      0.982 0.00 1.00 0.00
#> GAAATACTTCCTCG-1     3  0.0000      0.882 0.00 0.00 1.00
#> GAACCAACTTCCGC-1     2  0.0000      0.982 0.00 1.00 0.00
#> GAAGCTACGGTTTG-1     3  0.0000      0.882 0.00 0.00 1.00
#> GAAGGTCTGAAAGT-1     3  0.0000      0.882 0.00 0.00 1.00
#> GAAGTAGACTCCCA-1     1  0.0892      0.961 0.98 0.00 0.02
#> GAAGTGCTAAACGA-1     2  0.0000      0.982 0.00 1.00 0.00
#> GAATGCACCTTCGC-1     2  0.0000      0.982 0.00 1.00 0.00
#> GAATTAACGTCGTA-1     2  0.0000      0.982 0.00 1.00 0.00
#> GACGCTCTCTCTCG-1     3  0.2066      0.871 0.00 0.06 0.94
#> GACGGCACACGGGA-1     2  0.0000      0.982 0.00 1.00 0.00
#> GAGATGCTCTGGAT-1     1  0.2066      0.948 0.94 0.00 0.06
#> GAGCAGGATTCCCG-1     1  0.2066      0.948 0.94 0.00 0.06
#> GAGCGCTGAAGATG-1     2  0.0000      0.982 0.00 1.00 0.00
#> GAGGCAGACTTGCC-1     1  0.0000      0.966 1.00 0.00 0.00
#> GAGGTACTGACACT-1     2  0.1781      0.938 0.02 0.96 0.02
#> GAGGTGGATCCTCG-1     2  0.0000      0.982 0.00 1.00 0.00
#> GAGTGACTCAGCTA-1     3  0.0000      0.882 0.00 0.00 1.00
#> GAGTGACTCGGTAT-1     1  0.1529      0.955 0.96 0.00 0.04
#> GAGTTGTGCTGAGT-1     1  0.0000      0.966 1.00 0.00 0.00
#> GAGTTGTGGTAGCT-1     3  0.2066      0.871 0.00 0.06 0.94
#> GATAGAGAAGGGTG-1     1  0.0000      0.966 1.00 0.00 0.00
#> GATATATGTCCGTC-1     1  0.0000      0.966 1.00 0.00 0.00
#> GATATTGACAGGAG-1     1  0.3340      0.901 0.88 0.00 0.12
#> GATCCCTGACCTTT-1     2  0.0000      0.982 0.00 1.00 0.00
#> GATCCCTGTGTAGC-1     1  0.0000      0.966 1.00 0.00 0.00
#> GCACACCTGTGCTA-1     2  0.0000      0.982 0.00 1.00 0.00
#> GCACCACTTCCTTA-1     2  0.0000      0.982 0.00 1.00 0.00
#> GCACTAGAGTCGTA-1     1  0.2066      0.948 0.94 0.00 0.06
#> GCAGGGCTATCGAC-1     2  0.0000      0.982 0.00 1.00 0.00
#> GCAGGGCTTGGGAG-1     1  0.2066      0.948 0.94 0.00 0.06
#> GCCAAAACGAGGCA-1     1  0.2066      0.948 0.94 0.00 0.06
#> GCCCAACTATGGTC-1     1  0.0000      0.966 1.00 0.00 0.00
#> GCCCATACAGCGTT-1     1  0.2959      0.919 0.90 0.00 0.10
#> GCCGGAACGAACTC-1     1  0.0892      0.961 0.98 0.00 0.02
#> GCCGGAACGTTCTT-1     2  0.0000      0.982 0.00 1.00 0.00
#> GCCGGAACTGCACA-1     2  0.0000      0.982 0.00 1.00 0.00
#> GCCTACACAGTTCG-1     2  0.0000      0.982 0.00 1.00 0.00
#> GCCTCAACTCTTTG-1     3  0.4555      0.719 0.20 0.00 0.80
#> GCGCATCTTGCTCC-1     2  0.0000      0.982 0.00 1.00 0.00
#> GCGCGATGGTGCAT-1     2  0.0000      0.982 0.00 1.00 0.00
#> GCTAGATGGCGATT-1     1  0.0000      0.966 1.00 0.00 0.00
#> GCTATACTAGCGTT-1     1  0.0000      0.966 1.00 0.00 0.00
#> GCTCCATGAGAAGT-1     3  0.5416      0.827 0.10 0.08 0.82
#> GCTTAACTACTGGT-1     1  0.0000      0.966 1.00 0.00 0.00
#> GGAACACTTCAGAC-1     3  0.2066      0.871 0.00 0.06 0.94
#> GGAAGGTGGCGAGA-1     2  0.0000      0.982 0.00 1.00 0.00
#> GGACCTCTTTTCTG-1     1  0.0000      0.966 1.00 0.00 0.00
#> GGACGCTGTCCTCG-1     2  0.0000      0.982 0.00 1.00 0.00
#> GGAGGCCTCGTTGA-1     2  0.0000      0.982 0.00 1.00 0.00
#> GGATGTACGTGTCA-1     1  0.0000      0.966 1.00 0.00 0.00
#> GGCAAGGAAAAAGC-1     2  0.0000      0.982 0.00 1.00 0.00
#> GGCATATGCTTATC-1     2  0.0892      0.957 0.02 0.98 0.00
#> GGCATATGGGGAGT-1     3  0.2066      0.871 0.00 0.06 0.94
#> GGCCGAACTCTAGG-1     2  0.0000      0.982 0.00 1.00 0.00
#> GGCGACACTGCCCT-1     1  0.2066      0.948 0.94 0.00 0.06
#> GGCGGACTAGGAGC-1     1  0.2066      0.948 0.94 0.00 0.06
#> GGCGGACTCTTGGA-1     1  0.0000      0.966 1.00 0.00 0.00
#> GGCTAAACACCTGA-1     1  0.2066      0.948 0.94 0.00 0.06
#> GGCTAATGAGCACT-1     1  0.0000      0.966 1.00 0.00 0.00
#> GGGACCACACGTTG-1     1  0.0000      0.966 1.00 0.00 0.00
#> GGGTTAACGTGCAT-1     2  0.0000      0.982 0.00 1.00 0.00
#> GGTAAAGAGCTAAC-1     1  0.5216      0.627 0.74 0.00 0.26
#> GGTGGAGAAACGGG-1     1  0.2066      0.948 0.94 0.00 0.06
#> GGTGGAGACAGATC-1     2  0.0000      0.982 0.00 1.00 0.00
#> GGTGGAGATTACTC-1     1  0.0000      0.966 1.00 0.00 0.00
#> GGTTTACTACGCAT-1     1  0.2066      0.948 0.94 0.00 0.06
#> GTACCCTGTCCTTA-1     1  0.0000      0.966 1.00 0.00 0.00
#> GTACGTGAACGTTG-1     1  0.0000      0.966 1.00 0.00 0.00
#> GTAGTGTGAGCGGA-1     2  0.0000      0.982 0.00 1.00 0.00
#> GTATCTACAGAAGT-1     3  0.5835      0.555 0.34 0.00 0.66
#> GTATCTACGACGAG-1     1  0.0000      0.966 1.00 0.00 0.00
#> GTATTAGAAACAGA-1     3  0.0000      0.882 0.00 0.00 1.00
#> GTATTCACGGGTGA-1     1  0.0000      0.966 1.00 0.00 0.00
#> GTCAATCTGTAGCT-1     1  0.2066      0.948 0.94 0.00 0.06
#> GTCATACTGCGATT-1     3  0.6280      0.194 0.00 0.46 0.54
#> GTCATACTTCGCCT-1     3  0.2066      0.871 0.00 0.06 0.94
#> GTCATACTTTACCT-1     1  0.0000      0.966 1.00 0.00 0.00
#> GTCGACCTGAATGA-1     2  0.0000      0.982 0.00 1.00 0.00
#> GTGATTCTGGTTCA-1     2  0.0000      0.982 0.00 1.00 0.00
#> GTGTATCTAGTAGA-1     1  0.2066      0.948 0.94 0.00 0.06
#> GTGTCAGAAGCGTT-1     1  0.0000      0.966 1.00 0.00 0.00
#> GTTAAAACCGAGAG-1     2  0.0000      0.982 0.00 1.00 0.00
#> GTTCAACTGGGACA-1     2  0.0000      0.982 0.00 1.00 0.00
#> GTTGACGAGCCCTT-1     1  0.0000      0.966 1.00 0.00 0.00
#> GTTGACGATATCGG-1     2  0.0000      0.982 0.00 1.00 0.00
#> GTTGATCTTTTCAC-1     1  0.0000      0.966 1.00 0.00 0.00
#> GTTTAAGACTGTCC-1     1  0.0000      0.966 1.00 0.00 0.00
#> TAACACCTTGTTTC-1     3  0.2066      0.871 0.00 0.06 0.94
#> TAACTCACTCTACT-1     2  0.0000      0.982 0.00 1.00 0.00
#> TAAGAGGACTTGTT-1     2  0.0000      0.982 0.00 1.00 0.00
#> TAAGGGCTGCTGTA-1     3  0.0000      0.882 0.00 0.00 1.00
#> TAATGCCTCGTCTC-1     2  0.0000      0.982 0.00 1.00 0.00
#> TACGATCTTACGAC-1     1  0.0000      0.966 1.00 0.00 0.00
#> TACGCAGAGAATCC-1     1  0.2066      0.948 0.94 0.00 0.06
#> TACGGCCTGGGACA-1     2  0.0000      0.982 0.00 1.00 0.00
#> TACTACTGATGTCG-1     2  0.0000      0.982 0.00 1.00 0.00
#> TACTCTGAATCGAC-1     2  0.0000      0.982 0.00 1.00 0.00
#> TACTGTTGAGGCGA-1     2  0.0000      0.982 0.00 1.00 0.00
#> TACTTGACTCCTCG-1     1  0.0892      0.961 0.98 0.00 0.02
#> TAGAAACTGGGATG-1     3  0.6045      0.419 0.00 0.38 0.62
#> TAGCATCTCAGCTA-1     2  0.0000      0.982 0.00 1.00 0.00
#> TAGCCCACAGCCAT-1     1  0.2066      0.948 0.94 0.00 0.06
#> TAGCCCACAGCTAC-1     2  0.0000      0.982 0.00 1.00 0.00
#> TAGCCGCTTACTTC-1     1  0.2066      0.948 0.94 0.00 0.06
#> TAGGCATGCTCTCG-1     3  0.0000      0.882 0.00 0.00 1.00
#> TAGGCATGGCGAGA-1     1  0.0000      0.966 1.00 0.00 0.00
#> TAGGGACTGAACTC-1     2  0.0000      0.982 0.00 1.00 0.00
#> TAGGTGTGTTCTGT-1     3  0.0000      0.882 0.00 0.00 1.00
#> TAGTCTTGTGGAAA-1     1  0.2066      0.948 0.94 0.00 0.06
#> TAGTGGTGAAGTGA-1     2  0.0000      0.982 0.00 1.00 0.00
#> TAGTTAGAACCACA-1     2  0.0000      0.982 0.00 1.00 0.00
#> TATCCAACTCTCTA-1     1  0.2066      0.948 0.94 0.00 0.06
#> TATCTGACAGGTTC-1     1  0.0000      0.966 1.00 0.00 0.00
#> TATGAATGGAGGAC-1     2  0.2947      0.902 0.02 0.92 0.06
#> TATGGGTGCATCAG-1     2  0.0000      0.982 0.00 1.00 0.00
#> TATTTCCTGGAGGT-1     2  0.0000      0.982 0.00 1.00 0.00
#> TCAACACTGTTTGG-1     2  0.0000      0.982 0.00 1.00 0.00
#> TCAAGGACATTCTC-1     3  0.2537      0.863 0.08 0.00 0.92
#> TCAATCACACTCTT-1     1  0.0892      0.961 0.98 0.00 0.02
#> TCACCTCTACGACT-1     1  0.2066      0.948 0.94 0.00 0.06
#> TCACTATGGGGCAA-1     1  0.0000      0.966 1.00 0.00 0.00
#> TCAGACGACGTTAG-1     2  0.0000      0.982 0.00 1.00 0.00
#> TCAGTGGAAGATCC-1     1  0.0892      0.961 0.98 0.00 0.02
#> TCCATCCTCCCTAC-1     1  0.0000      0.966 1.00 0.00 0.00
#> TCCCGAACACAGTC-1     2  0.0000      0.982 0.00 1.00 0.00
#> TCCTAAACCGCATA-1     2  0.0000      0.982 0.00 1.00 0.00
#> TCCTAATGGTTTGG-1     2  0.5216      0.562 0.26 0.74 0.00
#> TCCTATGAAAAGCA-1     1  0.0892      0.955 0.98 0.00 0.02
#> TCGAATCTCTGGTA-1     1  0.0000      0.966 1.00 0.00 0.00
#> TCGAGAACGTTAGC-1     3  0.5560      0.544 0.30 0.00 0.70
#> TCGATTTGCAGCTA-1     2  0.0000      0.982 0.00 1.00 0.00
#> TCTAACACCAGTTG-1     2  0.7839      0.192 0.06 0.56 0.38
#> TCTAAGCTTAGTCG-1     1  0.0000      0.966 1.00 0.00 0.00
#> TGAATAACTCCCAC-1     2  0.0000      0.982 0.00 1.00 0.00
#> TGACGCCTTTACTC-1     3  0.0000      0.882 0.00 0.00 1.00
#> TGATAAACTCCGTC-1     2  0.0000      0.982 0.00 1.00 0.00
#> TGATCACTAGCATC-1     1  0.3340      0.901 0.88 0.00 0.12
#> TGCACAGACGACAT-1     2  0.0000      0.982 0.00 1.00 0.00
#> TGCCACTGCGATAC-1     2  0.0000      0.982 0.00 1.00 0.00
#> TGCTAGGAAACCGT-1     1  0.1529      0.955 0.96 0.00 0.04
#> TGCTATACTGCTGA-1     1  0.2066      0.948 0.94 0.00 0.06
#> TGCTGAGAGAGCAG-1     2  0.0000      0.982 0.00 1.00 0.00
#> TGGAACACAAACAG-1     2  0.0000      0.982 0.00 1.00 0.00
#> TGGAGACTTGACCA-1     1  0.0000      0.966 1.00 0.00 0.00
#> TGGTAGACCCTCAC-1     2  0.0000      0.982 0.00 1.00 0.00
#> TGTAATGACACAAC-1     2  0.0000      0.982 0.00 1.00 0.00
#> TGTAATGAGGTAAA-1     2  0.2414      0.916 0.04 0.94 0.02
#> TGTAGTCTTGCACA-1     1  0.2066      0.948 0.94 0.00 0.06
#> TGTGACGATTCTCA-1     1  0.2066      0.948 0.94 0.00 0.06
#> TGTGAGTGGAGATA-1     1  0.0000      0.966 1.00 0.00 0.00
#> TGTTACTGGCTACA-1     1  0.2066      0.948 0.94 0.00 0.06
#> TGTTACTGTAGTCG-1     1  0.0000      0.966 1.00 0.00 0.00
#> TTAACCACTAAGGA-1     1  0.0000      0.966 1.00 0.00 0.00
#> TTACCATGTGTCTT-1     1  0.4291      0.817 0.82 0.00 0.18
#> TTACGTACGTTCAG-1     3  0.2066      0.871 0.00 0.06 0.94
#> TTACTCGATCTACT-1     2  0.0000      0.982 0.00 1.00 0.00
#> TTAGTCTGCCAACA-1     2  0.0000      0.982 0.00 1.00 0.00
#> TTCCAAACTCCCAC-1     2  0.1529      0.943 0.00 0.96 0.04
#> TTCCAAACTTGACG-1     1  0.0000      0.966 1.00 0.00 0.00
#> TTCCCACTTGAGGG-1     2  0.0000      0.982 0.00 1.00 0.00
#> TTCGTATGAAAAGC-1     1  0.0000      0.966 1.00 0.00 0.00
#> TTCGTATGGATAGA-1     1  0.0000      0.966 1.00 0.00 0.00
#> TTCTAGTGGAGAGC-1     2  0.0000      0.982 0.00 1.00 0.00
#> TTCTGATGGAGACG-1     2  0.0000      0.982 0.00 1.00 0.00
#> TTGTCATGGACGGA-1     2  0.0000      0.982 0.00 1.00 0.00

show/hide code output

cbind(get_classes(res, k = 4), get_membership(res, k = 4))
#>                  class entropy silhouette   p1   p2   p3   p4
#> AAACCGTGTATGCG-1     3  0.4948    0.21723 0.00 0.44 0.56 0.00
#> AAACGCTGTAGCCA-1     1  0.4332    0.68578 0.80 0.00 0.04 0.16
#> AAATGTTGCCACAA-1     3  0.7206    0.04577 0.14 0.00 0.46 0.40
#> AAATTCGATTCTCA-1     4  0.3975    0.66009 0.24 0.00 0.00 0.76
#> AACCTTACGCGAGA-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> AACGCCCTCGTACA-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> AACGCCCTGGCATT-1     3  0.6074    0.29487 0.06 0.00 0.60 0.34
#> AACGTCGAGTATCG-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> AACTCGGAAAGTGA-1     4  0.4713    0.58583 0.36 0.00 0.00 0.64
#> AAGATTACCTCAAG-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> AAGCAAGAGCTTAG-1     1  0.6863    0.40952 0.64 0.12 0.02 0.22
#> AAGCAAGAGGTGTT-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> AAGGCTTGCGAACT-1     1  0.1211    0.76705 0.96 0.00 0.00 0.04
#> AAGTAGGATACAGC-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> AAGTCTCTCGGAGA-1     1  0.2011    0.75742 0.92 0.00 0.00 0.08
#> AATACTGAAAGGGC-1     1  0.4977    0.00453 0.54 0.00 0.00 0.46
#> AATACTGAATTGGC-1     2  0.0707    0.94878 0.00 0.98 0.00 0.02
#> AATAGGGAGAATGA-1     1  0.0000    0.77149 1.00 0.00 0.00 0.00
#> AATCCTTGGTGAGG-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> AATCGGTGGAACTC-1     1  0.4948   -0.03803 0.56 0.00 0.00 0.44
#> AATCTCTGCTTTAC-1     2  0.7732    0.35893 0.22 0.60 0.08 0.10
#> AATGATACACCAAC-1     1  0.2345    0.73396 0.90 0.00 0.00 0.10
#> AATGGCTGTAAAGG-1     4  0.4994    0.33249 0.48 0.00 0.00 0.52
#> AATGGCTGTACTCT-1     3  0.0000    0.72736 0.00 0.00 1.00 0.00
#> ACAAATTGTTGCGA-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> ACAACCGAGGGATG-1     4  0.3975    0.66009 0.24 0.00 0.00 0.76
#> ACAATTGACTGACA-1     1  0.2011    0.75725 0.92 0.00 0.00 0.08
#> ACAATTGATGACTG-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> ACACAGACCATACG-1     1  0.0707    0.77046 0.98 0.00 0.00 0.02
#> ACACCCTGGTGTTG-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> ACACGATGACGCAT-1     4  0.3821    0.47355 0.04 0.00 0.12 0.84
#> ACAGACACGGCATT-1     1  0.4994   -0.21200 0.52 0.00 0.00 0.48
#> ACAGGTACTGGTGT-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> ACAGTCGACCGATA-1     1  0.4977   -0.05042 0.54 0.00 0.00 0.46
#> ACCACGCTACCCAA-1     1  0.2011    0.76882 0.92 0.00 0.00 0.08
#> ACCATTACGAGATA-1     3  0.4994    0.23414 0.00 0.00 0.52 0.48
#> ACCCAAGAACTGTG-1     1  0.2011    0.74757 0.92 0.00 0.00 0.08
#> ACCCACTGGTTCAG-1     3  0.0000    0.72736 0.00 0.00 1.00 0.00
#> ACCCTCGACCTATT-1     4  0.4907    0.45153 0.42 0.00 0.00 0.58
#> ACCTGGCTAAGTAG-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> ACGAACACCTTGTT-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> ACGATCGAGGACTT-1     4  0.4624    0.58103 0.34 0.00 0.00 0.66
#> ACGATTCTACGGGA-1     1  0.3610    0.65727 0.80 0.00 0.00 0.20
#> ACGCAATGGTTCAG-1     2  0.4948    0.17035 0.00 0.56 0.44 0.00
#> ACGCGGTGTTTGCT-1     1  0.2647    0.72179 0.88 0.00 0.00 0.12
#> ACGCTGCTGTTCTT-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> ACGGAACTCAGATC-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> ACGGTAACCGCTAA-1     4  0.5062    0.56241 0.30 0.00 0.02 0.68
#> ACGGTAACCTTCGC-1     1  0.3400    0.68266 0.82 0.00 0.00 0.18
#> ACGTCGCTCCTGAA-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> ACGTGATGTGACAC-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> ACGTGCCTTCTATC-1     1  0.3853    0.69805 0.82 0.00 0.02 0.16
#> ACGTTGGAAACCTG-1     1  0.5000   -0.07234 0.50 0.00 0.00 0.50
#> ACGTTGGAGCCAAT-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> ACTATCACCTTGGA-1     1  0.4134    0.60733 0.74 0.00 0.00 0.26
#> ACTGAGACAACCAC-1     4  0.4977    0.39416 0.46 0.00 0.00 0.54
#> ACTGCCACACACGT-1     4  0.4907    0.49191 0.42 0.00 0.00 0.58
#> ACTGCCACTCCGTC-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> ACTGGCCTTCAGTG-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> ACTGTGGACGTGTA-1     1  0.3801    0.70782 0.78 0.00 0.00 0.22
#> ACTTCAACAAGCAA-1     4  0.4755    0.42260 0.20 0.00 0.04 0.76
#> ACTTCAACGTAGGG-1     2  0.2921    0.81751 0.00 0.86 0.14 0.00
#> AGAACAGAAATGCC-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> AGAATGGAAGAAGT-1     1  0.0707    0.77287 0.98 0.00 0.00 0.02
#> AGATATACCCGTAA-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> AGATTCCTGTTCAG-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> AGCATGACGATGAA-1     1  0.3172    0.70406 0.84 0.00 0.00 0.16
#> AGCCACCTGGATCT-1     1  0.2921    0.75601 0.86 0.00 0.00 0.14
#> AGCCTCTGCCAATG-1     2  0.2921    0.82170 0.00 0.86 0.00 0.14
#> AGCGATTGAGATCC-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> AGGAACCTTGCCTC-1     4  0.4855    0.44570 0.40 0.00 0.00 0.60
#> AGGATAGAGGATTC-1     1  0.1211    0.75963 0.96 0.00 0.00 0.04
#> AGGATGCTTTAGGC-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> AGGGACGAGTCAAC-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> AGGGACGATGCATG-1     1  0.3400    0.74542 0.82 0.00 0.00 0.18
#> AGGGCGCTATGGTC-1     4  0.6554    0.02979 0.08 0.00 0.40 0.52
#> AGGGTGGAGTTGCA-1     1  0.3400    0.68206 0.82 0.00 0.00 0.18
#> AGTAATACATCACG-1     4  0.4948    0.36685 0.44 0.00 0.00 0.56
#> AGTACTCTCAACCA-1     1  0.2345    0.76871 0.90 0.00 0.00 0.10
#> AGTCACGATGAGCT-1     4  0.4790    0.41657 0.38 0.00 0.00 0.62
#> AGTCAGACTAGAGA-1     4  0.4522    0.62677 0.32 0.00 0.00 0.68
#> AGTCTTACTTCGGA-1     3  0.0000    0.72736 0.00 0.00 1.00 0.00
#> AGTTCTTGAAGCCT-1     1  0.2345    0.74709 0.90 0.00 0.00 0.10
#> AGTTTCACGGTCTA-1     4  0.6382   -0.05418 0.08 0.00 0.34 0.58
#> AGTTTGCTACTGGT-1     4  0.3975    0.66009 0.24 0.00 0.00 0.76
#> ATACCACTGCCAAT-1     4  0.3975    0.66009 0.24 0.00 0.00 0.76
#> ATACTCTGGTATGC-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> ATCAACCTTCTCTA-1     4  0.3801    0.65440 0.22 0.00 0.00 0.78
#> ATCATCTGACACCA-1     3  0.0000    0.72736 0.00 0.00 1.00 0.00
#> ATCATGCTAGAGTA-1     1  0.1637    0.76525 0.94 0.00 0.00 0.06
#> ATCCCGTGCAGTCA-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> ATCCTAACGCTACA-1     4  0.4755    0.54264 0.20 0.00 0.04 0.76
#> ATCGAGTGGACGTT-1     1  0.0707    0.77287 0.98 0.00 0.00 0.02
#> ATCGCCACTGAGGG-1     1  0.3400    0.68266 0.82 0.00 0.00 0.18
#> ATCTTTCTTGTCCC-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> ATGAAGGAACAGCT-1     1  0.3610    0.65666 0.80 0.00 0.00 0.20
#> ATGAAGGACTTGCC-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> ATGATAACTTCACT-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> ATGATATGGTGCTA-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> ATGGACACGCATCA-1     2  0.3172    0.79187 0.00 0.84 0.16 0.00
#> ATGGGTACATCGGT-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> ATGTACCTTTCACT-1     1  0.2647    0.76369 0.88 0.00 0.00 0.12
#> ATTAACGATGAGAA-1     3  0.3606    0.65528 0.00 0.14 0.84 0.02
#> ATTAACGATGCAAC-1     1  0.1637    0.75958 0.94 0.00 0.00 0.06
#> ATTCAGCTCATTGG-1     3  0.0000    0.72736 0.00 0.00 1.00 0.00
#> ATTCCAACTTAGGC-1     2  0.6941    0.15490 0.12 0.52 0.00 0.36
#> ATTCGACTCACTAG-1     4  0.5636    0.58118 0.26 0.00 0.06 0.68
#> ATTTCGTGTATGGC-1     1  0.4790    0.26492 0.62 0.00 0.00 0.38
#> CAAAGCACGGTAAA-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> CAACGTGAGCCATA-1     1  0.3606    0.68192 0.84 0.00 0.02 0.14
#> CAAGAAGACCACAA-1     1  0.5535   -0.04247 0.56 0.00 0.02 0.42
#> CAAGCTGATCTATC-1     1  0.4936    0.50525 0.70 0.00 0.02 0.28
#> CAAGGACTTCTTTG-1     1  0.4713    0.28614 0.64 0.00 0.00 0.36
#> CAAGGTTGTCTGGA-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> CAATATGACCTTCG-1     1  0.2011    0.74757 0.92 0.00 0.00 0.08
#> CAATCTACTGACTG-1     2  0.0707    0.94806 0.00 0.98 0.00 0.02
#> CAATTCACCCAACA-1     1  0.0000    0.77149 1.00 0.00 0.00 0.00
#> CACATACTACAGCT-1     1  0.2921    0.72558 0.86 0.00 0.00 0.14
#> CACCACTGGCGAAG-1     4  0.3801    0.66218 0.22 0.00 0.00 0.78
#> CACCCATGTTCTGT-1     3  0.6766    0.10326 0.38 0.00 0.52 0.10
#> CACCGGGACGAGAG-1     1  0.1637    0.76521 0.94 0.00 0.00 0.06
#> CACCGGGACTTCTA-1     4  0.4994   -0.22715 0.00 0.00 0.48 0.52
#> CACCGGGACTTGCC-1     1  0.2647    0.73907 0.88 0.00 0.00 0.12
#> CACCGGGATTCGGA-1     1  0.0707    0.77145 0.98 0.00 0.00 0.02
#> CACCTGACACCCAA-1     1  0.1211    0.77015 0.96 0.00 0.00 0.04
#> CACCTGACCTCAAG-1     1  0.1211    0.77423 0.96 0.00 0.00 0.04
#> CACGGGTGCTTCGC-1     1  0.2921    0.70128 0.86 0.00 0.00 0.14
#> CACGGGTGGAGGAC-1     4  0.5661    0.61314 0.22 0.08 0.00 0.70
#> CACTATACGTTTGG-1     1  0.1211    0.76705 0.96 0.00 0.00 0.04
#> CACTTTGACTCTAT-1     1  0.2921    0.72301 0.86 0.00 0.00 0.14
#> CAGATGACATTCTC-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> CAGCAATGGAGGGT-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> CAGCGGACCTTTAC-1     2  0.0707    0.94883 0.00 0.98 0.00 0.02
#> CAGCTCTGCAAGCT-1     1  0.2647    0.71869 0.88 0.00 0.00 0.12
#> CAGCTCTGTGTGGT-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> CAGTGATGGCTAAC-1     1  0.6836    0.26786 0.58 0.28 0.00 0.14
#> CAGTTTACACACGT-1     4  0.4406    0.04574 0.00 0.30 0.00 0.70
#> CATCAGGACTTCCG-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> CATCAGGATAGCCA-1     2  0.1211    0.93091 0.00 0.96 0.04 0.00
#> CATGAGACGTTGAC-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> CATGTACTATCGTG-1     1  0.2011    0.75909 0.92 0.00 0.00 0.08
#> CATGTTACAGTCGT-1     4  0.4713    0.54944 0.36 0.00 0.00 0.64
#> CATTACACCAACTG-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> CATTTCGACTCTAT-1     4  0.4079    0.59327 0.18 0.00 0.02 0.80
#> CATTTCGAGATACC-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> CATTTGACCACACA-1     1  0.2921    0.75825 0.86 0.00 0.00 0.14
#> CATTTGACCCTGAA-1     1  0.4713    0.35182 0.64 0.00 0.00 0.36
#> CCAACCTGAAGTAG-1     1  0.2647    0.71985 0.88 0.00 0.00 0.12
#> CCAAGAACTACTGG-1     1  0.3172    0.68149 0.84 0.00 0.00 0.16
#> CCACCATGTCCTGC-1     1  0.4790    0.37112 0.62 0.00 0.00 0.38
#> CCGTACACGTCATG-1     1  0.2011    0.74582 0.92 0.00 0.00 0.08
#> CCTAAGGAGGGCAA-1     4  0.7581    0.45320 0.36 0.00 0.20 0.44
#> CCTCGAACACTTTC-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> CGAAGGGAAACCTG-1     1  0.4994    0.04450 0.52 0.00 0.00 0.48
#> CGACCACTAAAGTG-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> CGACCACTGCCAAT-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> CGAGAACTAAGGCG-1     1  0.0707    0.77348 0.98 0.00 0.00 0.02
#> CGAGATTGGACACT-1     1  0.1211    0.76374 0.96 0.00 0.00 0.04
#> CGAGATTGGCCATA-1     3  0.5062    0.40025 0.30 0.00 0.68 0.02
#> CGAGGCACCTATGG-1     1  0.3801    0.60938 0.78 0.00 0.00 0.22
#> CGAGGCTGACGCTA-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> CGATACGACAGGAG-1     4  0.4994   -0.22715 0.00 0.00 0.48 0.52
#> CGATCAGAAGAACA-1     1  0.0707    0.77145 0.98 0.00 0.00 0.02
#> CGATCCACCGGGAA-1     4  0.4406    0.63065 0.30 0.00 0.00 0.70
#> CGCCGAGAGCTTAG-1     2  0.0707    0.94878 0.00 0.98 0.00 0.02
#> CGCTACTGTTCCCG-1     1  0.0000    0.77149 1.00 0.00 0.00 0.00
#> CGGACCGATGCGTA-1     1  0.1211    0.77373 0.96 0.00 0.00 0.04
#> CGGACTCTCCTCGT-1     2  0.3030    0.86707 0.02 0.90 0.02 0.06
#> CGGCCAGAGAGGCA-1     1  0.4522    0.50892 0.68 0.00 0.00 0.32
#> CGGCGAACGACAAA-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> CGGCGAACTACTTC-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> CGGGACTGGAATAG-1     1  0.2921    0.73635 0.86 0.00 0.00 0.14
#> CGGGCATGACCCAA-1     3  0.1637    0.69053 0.06 0.00 0.94 0.00
#> CGGGCATGTCTCTA-1     4  0.3801    0.66218 0.22 0.00 0.00 0.78
#> CGTACCTGGCATCA-1     2  0.2011    0.89129 0.00 0.92 0.00 0.08
#> CGTCAAGACAGGAG-1     4  0.4522    0.38547 0.32 0.00 0.00 0.68
#> CGTGTAGACGATAC-1     4  0.4134    0.65187 0.26 0.00 0.00 0.74
#> CGTGTAGAGTTACG-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> CGTGTAGATTCGGA-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> CGTTATACCCTGAA-1     1  0.3610    0.63259 0.80 0.00 0.00 0.20
#> CTAAACCTCTGACA-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> CTAACGGAACCGAT-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> CTACAACTCCCGTT-1     1  0.2647    0.71869 0.88 0.00 0.00 0.12
#> CTACGCACTGGTCA-1     2  0.1411    0.92953 0.02 0.96 0.00 0.02
#> CTACTCCTATGTCG-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> CTAGAGACAGCATC-1     1  0.1637    0.77249 0.94 0.00 0.00 0.06
#> CTAGTTACGAAACA-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> CTATACTGCTACGA-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> CTATACTGTCTCAT-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> CTCGACTGGTTGAC-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> CTCGAGCTCTGGAT-1     3  0.4332    0.64104 0.00 0.16 0.80 0.04
#> CTGACAGAATCGTG-1     1  0.4277    0.53194 0.72 0.00 0.00 0.28
#> CTGAGAACGTAAAG-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> CTGCCAACTGCTCC-1     1  0.3610    0.65727 0.80 0.00 0.00 0.20
#> CTGCGACTCCACCT-1     1  0.5594   -0.18816 0.52 0.00 0.02 0.46
#> CTGGAAACAAACGA-1     1  0.1637    0.75698 0.94 0.00 0.00 0.06
#> CTGGATGACTGGAT-1     1  0.3400    0.70669 0.82 0.00 0.00 0.18
#> CTGTGAGACCTTGC-1     1  0.3172    0.70780 0.84 0.00 0.00 0.16
#> CTTGATTGAGGTTC-1     1  0.3610    0.63307 0.80 0.00 0.00 0.20
#> CTTTAGTGACGGGA-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> GAAATACTTCCTCG-1     3  0.5000    0.20583 0.00 0.00 0.50 0.50
#> GAACCAACTTCCGC-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> GAAGCTACGGTTTG-1     4  0.5000   -0.24433 0.00 0.00 0.50 0.50
#> GAAGGTCTGAAAGT-1     4  0.4994   -0.20639 0.00 0.00 0.48 0.52
#> GAAGTAGACTCCCA-1     1  0.4855    0.18706 0.60 0.00 0.00 0.40
#> GAAGTGCTAAACGA-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> GAATGCACCTTCGC-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> GAATTAACGTCGTA-1     2  0.3172    0.79016 0.00 0.84 0.16 0.00
#> GACGCTCTCTCTCG-1     3  0.0000    0.72736 0.00 0.00 1.00 0.00
#> GACGGCACACGGGA-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> GAGATGCTCTGGAT-1     4  0.4713    0.56228 0.36 0.00 0.00 0.64
#> GAGCAGGATTCCCG-1     4  0.4624    0.59060 0.34 0.00 0.00 0.66
#> GAGCGCTGAAGATG-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> GAGGCAGACTTGCC-1     1  0.2011    0.74757 0.92 0.00 0.00 0.08
#> GAGGTACTGACACT-1     2  0.3610    0.74166 0.00 0.80 0.00 0.20
#> GAGGTGGATCCTCG-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> GAGTGACTCAGCTA-1     4  0.4994   -0.19871 0.00 0.00 0.48 0.52
#> GAGTGACTCGGTAT-1     1  0.4713    0.42091 0.64 0.00 0.00 0.36
#> GAGTTGTGCTGAGT-1     1  0.3610    0.68770 0.80 0.00 0.00 0.20
#> GAGTTGTGGTAGCT-1     3  0.0000    0.72736 0.00 0.00 1.00 0.00
#> GATAGAGAAGGGTG-1     1  0.1211    0.76625 0.96 0.00 0.00 0.04
#> GATATATGTCCGTC-1     1  0.0000    0.77149 1.00 0.00 0.00 0.00
#> GATATTGACAGGAG-1     4  0.5428    0.55645 0.38 0.00 0.02 0.60
#> GATCCCTGACCTTT-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> GATCCCTGTGTAGC-1     1  0.3400    0.67993 0.82 0.00 0.00 0.18
#> GCACACCTGTGCTA-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> GCACCACTTCCTTA-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> GCACTAGAGTCGTA-1     4  0.3801    0.66024 0.22 0.00 0.00 0.78
#> GCAGGGCTATCGAC-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> GCAGGGCTTGGGAG-1     4  0.4406    0.63053 0.30 0.00 0.00 0.70
#> GCCAAAACGAGGCA-1     4  0.4994    0.33271 0.48 0.00 0.00 0.52
#> GCCCAACTATGGTC-1     1  0.1211    0.77015 0.96 0.00 0.00 0.04
#> GCCCATACAGCGTT-1     4  0.4277    0.45356 0.28 0.00 0.00 0.72
#> GCCGGAACGAACTC-1     1  0.3801    0.68927 0.78 0.00 0.00 0.22
#> GCCGGAACGTTCTT-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> GCCGGAACTGCACA-1     2  0.1211    0.93074 0.00 0.96 0.04 0.00
#> GCCTACACAGTTCG-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> GCCTCAACTCTTTG-1     4  0.5489    0.16600 0.06 0.00 0.24 0.70
#> GCGCATCTTGCTCC-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> GCGCGATGGTGCAT-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> GCTAGATGGCGATT-1     1  0.3172    0.70373 0.84 0.00 0.00 0.16
#> GCTATACTAGCGTT-1     1  0.2921    0.72066 0.86 0.00 0.00 0.14
#> GCTCCATGAGAAGT-1     4  0.7200   -0.09487 0.06 0.04 0.36 0.54
#> GCTTAACTACTGGT-1     1  0.1637    0.75904 0.94 0.00 0.00 0.06
#> GGAACACTTCAGAC-1     3  0.0000    0.72736 0.00 0.00 1.00 0.00
#> GGAAGGTGGCGAGA-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> GGACCTCTTTTCTG-1     1  0.0707    0.77145 0.98 0.00 0.00 0.02
#> GGACGCTGTCCTCG-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> GGAGGCCTCGTTGA-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> GGATGTACGTGTCA-1     1  0.3801    0.62881 0.78 0.00 0.00 0.22
#> GGCAAGGAAAAAGC-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> GGCATATGCTTATC-1     2  0.2647    0.85354 0.00 0.88 0.00 0.12
#> GGCATATGGGGAGT-1     3  0.0000    0.72736 0.00 0.00 1.00 0.00
#> GGCCGAACTCTAGG-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> GGCGACACTGCCCT-1     4  0.3801    0.66218 0.22 0.00 0.00 0.78
#> GGCGGACTAGGAGC-1     4  0.4522    0.61317 0.32 0.00 0.00 0.68
#> GGCGGACTCTTGGA-1     1  0.4134    0.68229 0.74 0.00 0.00 0.26
#> GGCTAAACACCTGA-1     4  0.3975    0.66009 0.24 0.00 0.00 0.76
#> GGCTAATGAGCACT-1     1  0.3975    0.59598 0.76 0.00 0.00 0.24
#> GGGACCACACGTTG-1     1  0.2345    0.73396 0.90 0.00 0.00 0.10
#> GGGTTAACGTGCAT-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> GGTAAAGAGCTAAC-1     1  0.5657    0.51422 0.72 0.00 0.16 0.12
#> GGTGGAGAAACGGG-1     4  0.3975    0.66009 0.24 0.00 0.00 0.76
#> GGTGGAGACAGATC-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> GGTGGAGATTACTC-1     1  0.1211    0.76625 0.96 0.00 0.00 0.04
#> GGTTTACTACGCAT-1     4  0.3400    0.65083 0.18 0.00 0.00 0.82
#> GTACCCTGTCCTTA-1     1  0.1211    0.76374 0.96 0.00 0.00 0.04
#> GTACGTGAACGTTG-1     1  0.1211    0.77143 0.96 0.00 0.00 0.04
#> GTAGTGTGAGCGGA-1     2  0.2011    0.89240 0.00 0.92 0.00 0.08
#> GTATCTACAGAAGT-1     1  0.7198    0.25662 0.54 0.00 0.18 0.28
#> GTATCTACGACGAG-1     1  0.2345    0.74987 0.90 0.00 0.00 0.10
#> GTATTAGAAACAGA-1     4  0.4994   -0.22715 0.00 0.00 0.48 0.52
#> GTATTCACGGGTGA-1     1  0.3610    0.65585 0.80 0.00 0.00 0.20
#> GTCAATCTGTAGCT-1     4  0.3172    0.63727 0.16 0.00 0.00 0.84
#> GTCATACTGCGATT-1     3  0.7168    0.52115 0.08 0.28 0.60 0.04
#> GTCATACTTCGCCT-1     3  0.0000    0.72736 0.00 0.00 1.00 0.00
#> GTCATACTTTACCT-1     1  0.3801    0.62881 0.78 0.00 0.00 0.22
#> GTCGACCTGAATGA-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> GTGATTCTGGTTCA-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> GTGTATCTAGTAGA-1     4  0.3975    0.65671 0.24 0.00 0.00 0.76
#> GTGTCAGAAGCGTT-1     1  0.4134    0.56566 0.74 0.00 0.00 0.26
#> GTTAAAACCGAGAG-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> GTTCAACTGGGACA-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> GTTGACGAGCCCTT-1     1  0.2647    0.72442 0.88 0.00 0.00 0.12
#> GTTGACGATATCGG-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> GTTGATCTTTTCAC-1     1  0.2921    0.75471 0.86 0.00 0.00 0.14
#> GTTTAAGACTGTCC-1     1  0.0707    0.77287 0.98 0.00 0.00 0.02
#> TAACACCTTGTTTC-1     3  0.0000    0.72736 0.00 0.00 1.00 0.00
#> TAACTCACTCTACT-1     2  0.0707    0.94725 0.00 0.98 0.00 0.02
#> TAAGAGGACTTGTT-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> TAAGGGCTGCTGTA-1     3  0.4855    0.33616 0.00 0.00 0.60 0.40
#> TAATGCCTCGTCTC-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> TACGATCTTACGAC-1     1  0.2647    0.73459 0.88 0.00 0.00 0.12
#> TACGCAGAGAATCC-1     4  0.3801    0.66218 0.22 0.00 0.00 0.78
#> TACGGCCTGGGACA-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> TACTACTGATGTCG-1     2  0.1637    0.90964 0.00 0.94 0.00 0.06
#> TACTCTGAATCGAC-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> TACTGTTGAGGCGA-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> TACTTGACTCCTCG-1     1  0.4134    0.55242 0.74 0.00 0.00 0.26
#> TAGAAACTGGGATG-1     3  0.4277    0.55379 0.00 0.28 0.72 0.00
#> TAGCATCTCAGCTA-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> TAGCCCACAGCCAT-1     4  0.4277    0.64539 0.28 0.00 0.00 0.72
#> TAGCCCACAGCTAC-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> TAGCCGCTTACTTC-1     4  0.4977    0.34758 0.46 0.00 0.00 0.54
#> TAGGCATGCTCTCG-1     3  0.3037    0.66443 0.02 0.00 0.88 0.10
#> TAGGCATGGCGAGA-1     1  0.2921    0.75471 0.86 0.00 0.00 0.14
#> TAGGGACTGAACTC-1     2  0.2011    0.89129 0.00 0.92 0.00 0.08
#> TAGGTGTGTTCTGT-1     4  0.6453    0.17785 0.08 0.00 0.36 0.56
#> TAGTCTTGTGGAAA-1     4  0.4134    0.65280 0.26 0.00 0.00 0.74
#> TAGTGGTGAAGTGA-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> TAGTTAGAACCACA-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> TATCCAACTCTCTA-1     4  0.4277    0.65269 0.28 0.00 0.00 0.72
#> TATCTGACAGGTTC-1     1  0.1211    0.77268 0.96 0.00 0.00 0.04
#> TATGAATGGAGGAC-1     2  0.6457    0.59722 0.12 0.72 0.08 0.08
#> TATGGGTGCATCAG-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> TATTTCCTGGAGGT-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> TCAACACTGTTTGG-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> TCAAGGACATTCTC-1     3  0.5106    0.51928 0.24 0.00 0.72 0.04
#> TCAATCACACTCTT-1     1  0.2647    0.76373 0.88 0.00 0.00 0.12
#> TCACCTCTACGACT-1     4  0.4977    0.38570 0.46 0.00 0.00 0.54
#> TCACTATGGGGCAA-1     1  0.3610    0.65727 0.80 0.00 0.00 0.20
#> TCAGACGACGTTAG-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> TCAGTGGAAGATCC-1     1  0.4522    0.43696 0.68 0.00 0.00 0.32
#> TCCATCCTCCCTAC-1     1  0.3610    0.63687 0.80 0.00 0.00 0.20
#> TCCCGAACACAGTC-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> TCCTAAACCGCATA-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> TCCTAATGGTTTGG-1     2  0.7877   -0.21826 0.36 0.36 0.00 0.28
#> TCCTATGAAAAGCA-1     1  0.0707    0.76828 0.98 0.00 0.00 0.02
#> TCGAATCTCTGGTA-1     1  0.0707    0.77348 0.98 0.00 0.00 0.02
#> TCGAGAACGTTAGC-1     4  0.4522    0.12476 0.00 0.00 0.32 0.68
#> TCGATTTGCAGCTA-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> TCTAACACCAGTTG-1     3  0.7261    0.55720 0.10 0.20 0.64 0.06
#> TCTAAGCTTAGTCG-1     1  0.2647    0.71674 0.88 0.00 0.00 0.12
#> TGAATAACTCCCAC-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> TGACGCCTTTACTC-1     4  0.4948   -0.11699 0.00 0.00 0.44 0.56
#> TGATAAACTCCGTC-1     2  0.3172    0.79493 0.00 0.84 0.00 0.16
#> TGATCACTAGCATC-1     4  0.4977    0.39416 0.46 0.00 0.00 0.54
#> TGCACAGACGACAT-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> TGCCACTGCGATAC-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> TGCTAGGAAACCGT-1     1  0.4994   -0.20998 0.52 0.00 0.00 0.48
#> TGCTATACTGCTGA-1     4  0.4522    0.61132 0.32 0.00 0.00 0.68
#> TGCTGAGAGAGCAG-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> TGGAACACAAACAG-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> TGGAGACTTGACCA-1     1  0.2345    0.73528 0.90 0.00 0.00 0.10
#> TGGTAGACCCTCAC-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> TGTAATGACACAAC-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> TGTAATGAGGTAAA-1     2  0.7487    0.31172 0.02 0.58 0.20 0.20
#> TGTAGTCTTGCACA-1     4  0.4406    0.62390 0.30 0.00 0.00 0.70
#> TGTGACGATTCTCA-1     4  0.4406    0.49433 0.30 0.00 0.00 0.70
#> TGTGAGTGGAGATA-1     1  0.2921    0.72087 0.86 0.00 0.00 0.14
#> TGTTACTGGCTACA-1     4  0.4277    0.64180 0.28 0.00 0.00 0.72
#> TGTTACTGTAGTCG-1     1  0.0707    0.76723 0.98 0.00 0.00 0.02
#> TTAACCACTAAGGA-1     1  0.0707    0.77348 0.98 0.00 0.00 0.02
#> TTACCATGTGTCTT-1     4  0.7493    0.44606 0.32 0.00 0.20 0.48
#> TTACGTACGTTCAG-1     3  0.0000    0.72736 0.00 0.00 1.00 0.00
#> TTACTCGATCTACT-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> TTAGTCTGCCAACA-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> TTCCAAACTCCCAC-1     3  0.4994    0.08649 0.00 0.48 0.52 0.00
#> TTCCAAACTTGACG-1     1  0.1637    0.75904 0.94 0.00 0.00 0.06
#> TTCCCACTTGAGGG-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> TTCGTATGAAAAGC-1     1  0.1211    0.75963 0.96 0.00 0.00 0.04
#> TTCGTATGGATAGA-1     1  0.1211    0.76625 0.96 0.00 0.00 0.04
#> TTCTAGTGGAGAGC-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> TTCTGATGGAGACG-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00
#> TTGTCATGGACGGA-1     2  0.0000    0.96522 0.00 1.00 0.00 0.00

Heatmaps for the consensus matrix. It visualizes the probability of two samples to be in a same group.

consensus_heatmap(res, k = 2)

plot of chunk tab-node-03-consensus-heatmap-1

consensus_heatmap(res, k = 3)

plot of chunk tab-node-03-consensus-heatmap-2

consensus_heatmap(res, k = 4)

plot of chunk tab-node-03-consensus-heatmap-3

Heatmaps for the membership of samples in all partitions to see how consistent they are:

membership_heatmap(res, k = 2)

plot of chunk tab-node-03-membership-heatmap-1

membership_heatmap(res, k = 3)

plot of chunk tab-node-03-membership-heatmap-2

membership_heatmap(res, k = 4)

plot of chunk tab-node-03-membership-heatmap-3

As soon as the classes for columns are determined, the signatures that are significantly different between subgroups can be looked for. Following are the heatmaps for signatures.

Signature heatmaps where rows are scaled:

get_signatures(res, k = 2)

plot of chunk tab-node-03-get-signatures-1

get_signatures(res, k = 3)

plot of chunk tab-node-03-get-signatures-2

get_signatures(res, k = 4)

plot of chunk tab-node-03-get-signatures-3

Signature heatmaps where rows are not scaled:

get_signatures(res, k = 2, scale_rows = FALSE)

plot of chunk tab-node-03-get-signatures-no-scale-1

get_signatures(res, k = 3, scale_rows = FALSE)

plot of chunk tab-node-03-get-signatures-no-scale-2

get_signatures(res, k = 4, scale_rows = FALSE)

plot of chunk tab-node-03-get-signatures-no-scale-3

Compare the overlap of signatures from different k:

compare_signatures(res)

plot of chunk node-03-signature_compare

get_signature() returns a data frame invisibly. To get the list of signatures, the function call should be assigned to a variable explicitly. In following code, if plot argument is set to FALSE, no heatmap is plotted while only the differential analysis is performed.

# code only for demonstration
tb = get_signature(res, k = ..., plot = FALSE)

An example of the output of tb is:

#>   which_row         fdr    mean_1    mean_2 scaled_mean_1 scaled_mean_2 km
#> 1        38 0.042760348  8.373488  9.131774    -0.5533452     0.5164555  1
#> 2        40 0.018707592  7.106213  8.469186    -0.6173731     0.5762149  1
#> 3        55 0.019134737 10.221463 11.207825    -0.6159697     0.5749050  1
#> 4        59 0.006059896  5.921854  7.869574    -0.6899429     0.6439467  1
#> 5        60 0.018055526  8.928898 10.211722    -0.6204761     0.5791110  1
#> 6        98 0.009384629 15.714769 14.887706     0.6635654    -0.6193277  2
...

The columns in tb are:

  1. which_row: row indices corresponding to the input matrix.
  2. fdr: FDR for the differential test.
  3. mean_x: The mean value in group x.
  4. scaled_mean_x: The mean value in group x after rows are scaled.
  5. km: Row groups if k-means clustering is applied to rows (which is done by automatically selecting number of clusters).

If there are too many signatures, top_signatures = ... can be set to only show the signatures with the highest FDRs:

# code only for demonstration
# e.g. to show the top 500 most significant rows
tb = get_signature(res, k = ..., top_signatures = 500)

If the signatures are defined as these which are uniquely high in current group, diff_method argument can be set to "uniquely_high_in_one_group":

# code only for demonstration
tb = get_signature(res, k = ..., diff_method = "uniquely_high_in_one_group")

UMAP plot which shows how samples are separated.

dimension_reduction(res, k = 2, method = "UMAP")

plot of chunk tab-node-03-dimension-reduction-1

dimension_reduction(res, k = 3, method = "UMAP")

plot of chunk tab-node-03-dimension-reduction-2

dimension_reduction(res, k = 4, method = "UMAP")

plot of chunk tab-node-03-dimension-reduction-3

Following heatmap shows how subgroups are split when increasing k:

collect_classes(res)

plot of chunk node-03-collect-classes

Test correlation between subgroups and known annotations. If the known annotation is numeric, one-way ANOVA test is applied, and if the known annotation is discrete, chi-squared contingency table test is applied.

test_to_known_factors(res)
#>             n_sample Seurat_class(p-value) k
#> ATC:skmeans      360              4.18e-64 2
#> ATC:skmeans      359             3.83e-109 3
#> ATC:skmeans      300              5.46e-86 4

If matrix rows can be associated to genes, consider to use functional_enrichment(res, ...) to perform function enrichment for the signature genes. See this vignette for more detailed explanations.


Node04

Parent node: Node0. Child nodes: Node021 , Node022 , Node031-leaf , Node032-leaf , Node041-leaf , Node042-leaf .

The object with results only for a single top-value method and a single partitioning method can be extracted as:

res = res_rh["04"]

A summary of res and all the functions that can be applied to it:

res
#> A 'ConsensusPartition' object with k = 2, 3, 4.
#>   On a matrix with 3472 rows and 346 columns.
#>   Top rows (302) are extracted by 'ATC' method.
#>   Subgroups are detected by 'skmeans' method.
#>   Performed in total 150 partitions by row resampling.
#>   Best k for subgroups seems to be 2.
#> 
#> Following methods can be applied to this 'ConsensusPartition' object:
#>  [1] "cola_report"             "collect_classes"         "collect_plots"          
#>  [4] "collect_stats"           "colnames"                "compare_partitions"     
#>  [7] "compare_signatures"      "consensus_heatmap"       "dimension_reduction"    
#> [10] "functional_enrichment"   "get_anno_col"            "get_anno"               
#> [13] "get_classes"             "get_consensus"           "get_matrix"             
#> [16] "get_membership"          "get_param"               "get_signatures"         
#> [19] "get_stats"               "is_best_k"               "is_stable_k"            
#> [22] "membership_heatmap"      "ncol"                    "nrow"                   
#> [25] "plot_ecdf"               "predict_classes"         "rownames"               
#> [28] "select_partition_number" "show"                    "suggest_best_k"         
#> [31] "test_to_known_factors"   "top_rows_heatmap"

collect_plots() function collects all the plots made from res for all k (number of subgroups) into one single page to provide an easy and fast comparison between different k.

collect_plots(res)

plot of chunk node-04-collect-plots

The plots are:

All the plots in panels can be made by individual functions and they are plotted later in this section.

select_partition_number() produces several plots showing different statistics for choosing “optimized” k. There are following statistics:

The detailed explanations of these statistics can be found in the cola vignette.

Generally speaking, higher 1-PAC score, higher mean silhouette score or higher concordance corresponds to better partition. Rand index and Jaccard index measure how similar the current partition is compared to partition with k-1. If they are too similar, we won't accept k is better than k-1.

select_partition_number(res)

plot of chunk node-04-select-partition-number

The numeric values for all these statistics can be obtained by get_stats().

get_stats(res)
#>   k 1-PAC mean_silhouette concordance area_increased  Rand Jaccard
#> 2 2 0.845           0.909       0.961          0.483 0.520   0.520
#> 3 3 0.566           0.726       0.864          0.319 0.827   0.676
#> 4 4 0.491           0.521       0.745          0.117 0.923   0.802

suggest_best_k() suggests the best \(k\) based on these statistics. The rules are as follows:

suggest_best_k(res)
#> [1] 2

Following is the table of the partitions (You need to click the show/hide code output link to see it). The membership matrix (columns with name p*) is inferred by clue::cl_consensus() function with the SE method. Basically the value in the membership matrix represents the probability to belong to a certain group. The finall subgroup label for an item is determined with the group with highest probability it belongs to.

In get_classes() function, the entropy is calculated from the membership matrix and the silhouette score is calculated from the consensus matrix.

show/hide code output

cbind(get_classes(res, k = 2), get_membership(res, k = 2))
#>                  class entropy silhouette   p1   p2
#> AAACATTGAGCTAC-1     2   0.000     0.9587 0.00 1.00
#> AAACTTGAAAAACG-1     2   0.000     0.9587 0.00 1.00
#> AAAGGCCTGTCTAG-1     2   0.000     0.9587 0.00 1.00
#> AAAGTTTGATCACG-1     1   0.000     0.9589 1.00 0.00
#> AAAGTTTGGGGTGA-1     2   0.000     0.9587 0.00 1.00
#> AAATCAACAATGCC-1     2   0.000     0.9587 0.00 1.00
#> AAATCCCTGCTATG-1     1   0.000     0.9589 1.00 0.00
#> AACCGATGGTCATG-1     2   0.855     0.6251 0.28 0.72
#> AACGTGTGGCGGAA-1     1   0.999     0.0742 0.52 0.48
#> AACTTGCTACGCTA-1     2   0.000     0.9587 0.00 1.00
#> AAGAAGACGTAGGG-1     1   0.000     0.9589 1.00 0.00
#> AAGACAGAAGTCTG-1     1   0.000     0.9589 1.00 0.00
#> AAGAGATGGGTAGG-1     1   0.000     0.9589 1.00 0.00
#> AAGATGGAAAACAG-1     1   0.000     0.9589 1.00 0.00
#> AAGCACTGAGCAAA-1     2   0.000     0.9587 0.00 1.00
#> AAGCACTGGTTCTT-1     2   0.000     0.9587 0.00 1.00
#> AAGCGACTTACAGC-1     1   0.000     0.9589 1.00 0.00
#> AAGGTCACTGTTTC-1     1   0.000     0.9589 1.00 0.00
#> AAGTAACTGAGATA-1     1   0.000     0.9589 1.00 0.00
#> AAGTGGCTTGGAGG-1     1   0.000     0.9589 1.00 0.00
#> AATACCCTGGACGA-1     1   0.000     0.9589 1.00 0.00
#> AATAGGGAACCCTC-1     2   0.000     0.9587 0.00 1.00
#> AATCCGGAATGCTG-1     2   0.000     0.9587 0.00 1.00
#> AATGCGTGACACCA-1     2   0.000     0.9587 0.00 1.00
#> AATGCGTGGCTATG-1     2   0.000     0.9587 0.00 1.00
#> AATGGCTGACACCA-1     2   0.000     0.9587 0.00 1.00
#> AATTACGATTGGCA-1     1   0.000     0.9589 1.00 0.00
#> AATTCCTGCTCAGA-1     2   0.680     0.7820 0.18 0.82
#> AATTGTGACTTGGA-1     1   0.000     0.9589 1.00 0.00
#> ACAAGAGAGTTGAC-1     1   0.000     0.9589 1.00 0.00
#> ACAATCCTTAGCGT-1     2   0.141     0.9451 0.02 0.98
#> ACATGGTGCAACCA-1     2   0.000     0.9587 0.00 1.00
#> ACCAGTGAACGGTT-1     1   0.529     0.8501 0.88 0.12
#> ACCCAAGATTCACT-1     1   0.000     0.9589 1.00 0.00
#> ACCCGTTGATGACC-1     1   0.000     0.9589 1.00 0.00
#> ACCCTCGACGGTAT-1     1   0.000     0.9589 1.00 0.00
#> ACCGTGCTGGAACG-1     2   0.000     0.9587 0.00 1.00
#> ACCTATTGCTGAGT-1     1   0.000     0.9589 1.00 0.00
#> ACGAAGCTCTGAGT-1     2   0.000     0.9587 0.00 1.00
#> ACGACCCTTGACAC-1     2   0.141     0.9450 0.02 0.98
#> ACGAGTACCCTAAG-1     1   0.000     0.9589 1.00 0.00
#> ACGAGTACGAATCC-1     2   0.000     0.9587 0.00 1.00
#> ACGCACCTGTTAGC-1     1   0.000     0.9589 1.00 0.00
#> ACGCGGTGTGTGGT-1     2   0.000     0.9587 0.00 1.00
#> ACGGATTGGGAGGT-1     1   0.000     0.9589 1.00 0.00
#> ACGGTATGGGTATC-1     2   0.000     0.9587 0.00 1.00
#> ACGGTATGGTTGTG-1     1   0.000     0.9589 1.00 0.00
#> ACGTAGACTACAGC-1     1   0.000     0.9589 1.00 0.00
#> ACGTCGCTTCTCAT-1     1   0.000     0.9589 1.00 0.00
#> ACGTTGGATATGGC-1     1   0.000     0.9589 1.00 0.00
#> ACTCAGGATCTATC-1     2   0.402     0.8939 0.08 0.92
#> ACTCTCCTGCATAC-1     2   0.000     0.9587 0.00 1.00
#> ACTGAGACGTTGGT-1     2   0.000     0.9587 0.00 1.00
#> ACTGTGGATCTAGG-1     2   0.000     0.9587 0.00 1.00
#> ACTTCTGACATGCA-1     1   0.000     0.9589 1.00 0.00
#> ACTTGACTCCACAA-1     2   0.000     0.9587 0.00 1.00
#> AGAAACGAAAGTAG-1     1   0.000     0.9589 1.00 0.00
#> AGAACAGACGACTA-1     1   0.000     0.9589 1.00 0.00
#> AGACGTACCCCTAC-1     1   0.000     0.9589 1.00 0.00
#> AGACTTCTCATGCA-1     1   0.000     0.9589 1.00 0.00
#> AGAGATGACAGTCA-1     1   0.000     0.9589 1.00 0.00
#> AGAGATGATCTCGC-1     2   0.000     0.9587 0.00 1.00
#> AGAGTGCTGTGTTG-1     1   0.958     0.3960 0.62 0.38
#> AGATATACTGTTCT-1     2   0.000     0.9587 0.00 1.00
#> AGATCGTGTTTGTC-1     1   0.000     0.9589 1.00 0.00
#> AGATCTCTATCACG-1     1   0.000     0.9589 1.00 0.00
#> AGCATCGAAGGGTG-1     2   0.827     0.6618 0.26 0.74
#> AGCCTCTGCAGTTG-1     1   0.000     0.9589 1.00 0.00
#> AGCTTTACTCTCAT-1     2   0.000     0.9587 0.00 1.00
#> AGGATGCTACTAGC-1     1   0.141     0.9436 0.98 0.02
#> AGGGTGGACAGTCA-1     2   0.000     0.9587 0.00 1.00
#> AGGTCATGAGTGTC-1     1   0.000     0.9589 1.00 0.00
#> AGGTGTTGGTTACG-1     2   0.634     0.8067 0.16 0.84
#> AGTAATACCGAACT-1     1   0.000     0.9589 1.00 0.00
#> AGTACTCTACGTGT-1     1   0.000     0.9589 1.00 0.00
#> ATAAACACAGTGCT-1     2   0.000     0.9587 0.00 1.00
#> ATAAGTACGAATGA-1     1   0.000     0.9589 1.00 0.00
#> ATAATCGAGCTGAT-1     1   0.000     0.9589 1.00 0.00
#> ATACGGACGAGGTG-1     1   0.000     0.9589 1.00 0.00
#> ATACGGACTATGCG-1     1   0.000     0.9589 1.00 0.00
#> ATAGATTGGTGTAC-1     2   0.000     0.9587 0.00 1.00
#> ATCACGGATTTCGT-1     2   0.141     0.9451 0.02 0.98
#> ATCATGCTGAACCT-1     2   0.000     0.9587 0.00 1.00
#> ATCCCGTGCATGCA-1     1   0.000     0.9589 1.00 0.00
#> ATCCCGTGGCTGAT-1     2   0.000     0.9587 0.00 1.00
#> ATCCGCACGCATCA-1     2   0.000     0.9587 0.00 1.00
#> ATCCTAACGACGGA-1     1   0.000     0.9589 1.00 0.00
#> ATCGCAGAGTGTCA-1     2   0.000     0.9587 0.00 1.00
#> ATCGCCTGTGGCAT-1     1   0.000     0.9589 1.00 0.00
#> ATCGCGCTTTTCGT-1     1   0.760     0.7214 0.78 0.22
#> ATCTCAACAGGAGC-1     1   0.958     0.4052 0.62 0.38
#> ATGAAGGACCTGTC-1     2   0.141     0.9452 0.02 0.98
#> ATGAAGGACCTTAT-1     1   0.000     0.9589 1.00 0.00
#> ATGAAGGACTAGTG-1     1   0.000     0.9589 1.00 0.00
#> ATGACGTGACGACT-1     1   0.000     0.9589 1.00 0.00
#> ATGAGAGAAGTAGA-1     1   0.000     0.9589 1.00 0.00
#> ATGCACGAATGTCG-1     1   0.000     0.9589 1.00 0.00
#> ATGCACGAGAACCT-1     2   0.000     0.9587 0.00 1.00
#> ATGCAGTGTTACCT-1     1   0.000     0.9589 1.00 0.00
#> ATGCGATGGTTACG-1     2   0.000     0.9587 0.00 1.00
#> ATGCTTTGTAGTCG-1     1   0.000     0.9589 1.00 0.00
#> ATGGGTACAACCTG-1     1   0.000     0.9589 1.00 0.00
#> ATTGCTTGTTACTC-1     2   0.000     0.9587 0.00 1.00
#> ATTGGTCTGACTAC-1     2   0.000     0.9587 0.00 1.00
#> ATTGGTCTTGTCTT-1     1   0.000     0.9589 1.00 0.00
#> CAAAGCACCGTAAC-1     2   0.141     0.9451 0.02 0.98
#> CAAGACTGACCTGA-1     1   0.000     0.9589 1.00 0.00
#> CAAGACTGAGTAGA-1     2   0.000     0.9587 0.00 1.00
#> CAAGGTTGTCATTC-1     1   0.000     0.9589 1.00 0.00
#> CAAGTCGAAACAGA-1     2   0.000     0.9587 0.00 1.00
#> CACAGAACCCTTGC-1     2   0.000     0.9587 0.00 1.00
#> CACCGTACTAAGGA-1     1   0.000     0.9589 1.00 0.00
#> CACCTGACGAAAGT-1     2   0.000     0.9587 0.00 1.00
#> CACGAAACTTCCGC-1     1   0.990     0.2267 0.56 0.44
#> CACGACCTCGATAC-1     1   0.141     0.9435 0.98 0.02
#> CACGCTACTGTTCT-1     1   0.000     0.9589 1.00 0.00
#> CACTAACTCCTAAG-1     2   0.000     0.9587 0.00 1.00
#> CACTAGGATGATGC-1     1   0.000     0.9589 1.00 0.00
#> CACTATACCCCGTT-1     2   0.000     0.9587 0.00 1.00
#> CACTTAACCGTACA-1     1   0.141     0.9436 0.98 0.02
#> CAGATCGAATGTCG-1     2   0.141     0.9450 0.02 0.98
#> CAGGCCGACTAGCA-1     2   0.141     0.9451 0.02 0.98
#> CAGGGCACCATACG-1     1   0.000     0.9589 1.00 0.00
#> CAGGTTGAGGATCT-1     2   0.000     0.9587 0.00 1.00
#> CAGTGATGGACGGA-1     1   0.000     0.9589 1.00 0.00
#> CAGTGATGTAAGGA-1     2   0.000     0.9587 0.00 1.00
#> CAGTGATGTACGCA-1     1   0.000     0.9589 1.00 0.00
#> CAGTTACTAAGGTA-1     2   0.000     0.9587 0.00 1.00
#> CATATAGATCAGGT-1     2   0.000     0.9587 0.00 1.00
#> CATCATACGGAGCA-1     1   0.000     0.9589 1.00 0.00
#> CATCGCTGTGGCAT-1     1   0.327     0.9101 0.94 0.06
#> CATCTCCTATGTGC-1     2   0.925     0.5039 0.34 0.66
#> CATGAGACACGGGA-1     1   0.000     0.9589 1.00 0.00
#> CATTACACACGGAG-1     1   0.000     0.9589 1.00 0.00
#> CATTGTACTCGATG-1     2   0.000     0.9587 0.00 1.00
#> CATTTGTGACGACT-1     2   0.000     0.9587 0.00 1.00
#> CATTTGTGGGATCT-1     2   0.000     0.9587 0.00 1.00
#> CCAAGAACTCCTAT-1     1   0.000     0.9589 1.00 0.00
#> CCAGAAACCCTGTC-1     1   0.000     0.9589 1.00 0.00
#> CCAGACCTCTGAGT-1     1   0.000     0.9589 1.00 0.00
#> CCAGCTACCAGCTA-1     1   0.000     0.9589 1.00 0.00
#> CCAGGTCTACACCA-1     1   0.000     0.9589 1.00 0.00
#> CCAGTCACACTGTG-1     1   0.760     0.7206 0.78 0.22
#> CCATCCGAAGGTTC-1     1   0.000     0.9589 1.00 0.00
#> CCCAACACCTCGCT-1     2   0.000     0.9587 0.00 1.00
#> CCCAGACTGGTTTG-1     2   0.000     0.9587 0.00 1.00
#> CCCAGTTGTCTATC-1     1   0.000     0.9589 1.00 0.00
#> CCCTCAGACACTTT-1     2   0.000     0.9587 0.00 1.00
#> CCCTGAACTAAAGG-1     1   0.000     0.9589 1.00 0.00
#> CCCTGATGCAAGCT-1     2   0.402     0.8943 0.08 0.92
#> CCGCTATGGGACGA-1     1   0.141     0.9435 0.98 0.02
#> CCGTACACAGCGTT-1     2   0.000     0.9587 0.00 1.00
#> CCTACCGAGGGATG-1     2   0.000     0.9587 0.00 1.00
#> CCTAGAGAGGTGAG-1     1   0.000     0.9589 1.00 0.00
#> CCTGACTGTGTCTT-1     1   0.000     0.9589 1.00 0.00
#> CCTTAATGCCCAAA-1     1   0.469     0.8707 0.90 0.10
#> CCTTCACTCAGTCA-1     2   0.000     0.9587 0.00 1.00
#> CGAAGGGATCCGAA-1     2   0.000     0.9587 0.00 1.00
#> CGAAGTACCAACTG-1     1   0.000     0.9589 1.00 0.00
#> CGACAAACCGACAT-1     2   0.000     0.9587 0.00 1.00
#> CGAGGAGACCTCCA-1     1   0.000     0.9589 1.00 0.00
#> CGAGGGCTACGACT-1     1   0.000     0.9589 1.00 0.00
#> CGATACGATTCACT-1     1   0.958     0.3986 0.62 0.38
#> CGATCCACTTCCAT-1     1   0.000     0.9589 1.00 0.00
#> CGCACGGAGGACGA-1     1   0.000     0.9589 1.00 0.00
#> CGCACTACTCGCCT-1     1   0.000     0.9589 1.00 0.00
#> CGCCATTGGAGCAG-1     2   0.000     0.9587 0.00 1.00
#> CGCCATTGTACTGG-1     2   0.000     0.9587 0.00 1.00
#> CGCGAGACAGGTCT-1     2   0.000     0.9587 0.00 1.00
#> CGCGATCTTTCTTG-1     2   0.000     0.9587 0.00 1.00
#> CGGACTCTAAACAG-1     1   0.000     0.9589 1.00 0.00
#> CTAAACCTGTGCAT-1     2   0.000     0.9587 0.00 1.00
#> CTAAGGTGCCTAAG-1     1   0.000     0.9589 1.00 0.00
#> CTACTATGTAAAGG-1     1   0.000     0.9589 1.00 0.00
#> CTAGGATGAGCCTA-1     2   0.000     0.9587 0.00 1.00
#> CTAGGATGATCGTG-1     2   0.000     0.9587 0.00 1.00
#> CTATAAGATCGTTT-1     2   0.000     0.9587 0.00 1.00
#> CTATGTACTGTTTC-1     2   0.000     0.9587 0.00 1.00
#> CTGAAGACGTGCAT-1     2   0.000     0.9587 0.00 1.00
#> CTGAAGTGCAGCTA-1     1   0.141     0.9436 0.98 0.02
#> CTGGATGATGTGAC-1     1   0.000     0.9589 1.00 0.00
#> CTTAACACTATCGG-1     1   0.000     0.9589 1.00 0.00
#> CTTAAGCTCCGCTT-1     2   0.000     0.9587 0.00 1.00
#> CTTCATGAAGCATC-1     1   0.000     0.9589 1.00 0.00
#> CTTGTATGACACCA-1     2   0.000     0.9587 0.00 1.00
#> CTTGTATGCGCAAT-1     1   0.000     0.9589 1.00 0.00
#> GAAAGCCTACGTTG-1     1   0.855     0.6250 0.72 0.28
#> GAAATACTCTTAGG-1     1   0.000     0.9589 1.00 0.00
#> GAAGTCACCCTGTC-1     1   0.327     0.9105 0.94 0.06
#> GAAGTCTGTCGCAA-1     1   0.584     0.8264 0.86 0.14
#> GAATTAACTGAAGA-1     2   0.000     0.9587 0.00 1.00
#> GACAGGGAAGAGTA-1     1   0.000     0.9589 1.00 0.00
#> GACAGTTGAGTAGA-1     2   0.000     0.9587 0.00 1.00
#> GACCCTACTAAAGG-1     1   0.000     0.9589 1.00 0.00
#> GACGATTGCCAATG-1     1   0.000     0.9589 1.00 0.00
#> GACGTCCTGATAAG-1     2   0.000     0.9587 0.00 1.00
#> GACTACGATGGTCA-1     1   0.000     0.9589 1.00 0.00
#> GACTTTACGACAGG-1     2   0.958     0.4076 0.38 0.62
#> GAGAAATGTTCTCA-1     2   0.722     0.7568 0.20 0.80
#> GAGCGGCTGGGAGT-1     1   0.000     0.9589 1.00 0.00
#> GAGGATCTGAAAGT-1     1   0.000     0.9589 1.00 0.00
#> GAGTCTGATTTGGG-1     1   0.000     0.9589 1.00 0.00
#> GAGTGACTCTTGCC-1     2   0.634     0.8075 0.16 0.84
#> GAGTGACTGACTAC-1     1   0.000     0.9589 1.00 0.00
#> GAGTGGGAGTCTTT-1     1   0.469     0.8706 0.90 0.10
#> GAGTGGGATGCTGA-1     1   0.000     0.9589 1.00 0.00
#> GATCGATGACTAGC-1     2   0.402     0.8943 0.08 0.92
#> GATCGATGGTAAAG-1     1   0.000     0.9589 1.00 0.00
#> GATCTACTTTGCAG-1     1   0.881     0.5820 0.70 0.30
#> GATTCTTGCGAGTT-1     1   0.000     0.9589 1.00 0.00
#> GATTGGACCCGTTC-1     2   0.000     0.9587 0.00 1.00
#> GATTGGACGGTGTT-1     1   0.000     0.9589 1.00 0.00
#> GATTGGACTTTCGT-1     1   0.000     0.9589 1.00 0.00
#> GATTTAGACTAAGC-1     2   0.000     0.9587 0.00 1.00
#> GCACTAGAAGATGA-1     1   0.000     0.9589 1.00 0.00
#> GCACTAGACGTAAC-1     1   0.000     0.9589 1.00 0.00
#> GCCTAGCTACGGAG-1     1   0.000     0.9589 1.00 0.00
#> GCGAGCACTGTCGA-1     1   0.000     0.9589 1.00 0.00
#> GCGCGAACGTTCTT-1     1   0.795     0.6906 0.76 0.24
#> GCGGCAACGGAGGT-1     1   0.000     0.9589 1.00 0.00
#> GCTACAGAATCTTC-1     1   0.000     0.9589 1.00 0.00
#> GCTAGAACAGAGGC-1     1   0.000     0.9589 1.00 0.00
#> GGAACTTGGGTAGG-1     1   0.000     0.9589 1.00 0.00
#> GGAATCTGCTTAGG-1     1   0.000     0.9589 1.00 0.00
#> GGACAGGAGTGCTA-1     2   0.000     0.9587 0.00 1.00
#> GGAGCAGATTCAGG-1     1   0.000     0.9589 1.00 0.00
#> GGAGCCACCTTCTA-1     2   0.000     0.9587 0.00 1.00
#> GGATGTACCAAAGA-1     1   0.141     0.9435 0.98 0.02
#> GGCAATACGCTAAC-1     1   0.000     0.9589 1.00 0.00
#> GGCAATACGTTTCT-1     2   0.000     0.9587 0.00 1.00
#> GGGAACGACACAAC-1     1   0.000     0.9589 1.00 0.00
#> GGGACCTGTGGAGG-1     1   0.000     0.9589 1.00 0.00
#> GGGATGGACGACAT-1     1   0.402     0.8903 0.92 0.08
#> GGGCCAACGCGTTA-1     2   0.000     0.9587 0.00 1.00
#> GGGCCAACTCCAAG-1     2   0.402     0.8944 0.08 0.92
#> GGGTAACTCTAGTG-1     1   0.000     0.9589 1.00 0.00
#> GGTACATGAAAGCA-1     1   0.242     0.9272 0.96 0.04
#> GGTATCGATGAACC-1     1   0.000     0.9589 1.00 0.00
#> GGTGATACCGACTA-1     1   0.000     0.9589 1.00 0.00
#> GTAACGTGATCGGT-1     1   0.904     0.5430 0.68 0.32
#> GTAACGTGCAGCTA-1     2   0.881     0.5871 0.30 0.70
#> GTAACGTGGTTGAC-1     2   0.141     0.9451 0.02 0.98
#> GTAAGCACTCATTC-1     1   0.000     0.9589 1.00 0.00
#> GTAGCAACCATTTC-1     2   0.990     0.2276 0.44 0.56
#> GTAGCATGCACTCC-1     1   0.000     0.9589 1.00 0.00
#> GTCATACTAATCGC-1     1   0.971     0.3511 0.60 0.40
#> GTCGCACTTGAGAA-1     2   0.000     0.9587 0.00 1.00
#> GTGATGACCTGAGT-1     1   0.000     0.9589 1.00 0.00
#> GTGATTCTTAGCGT-1     1   0.000     0.9589 1.00 0.00
#> GTGTATCTAGCCTA-1     1   0.000     0.9589 1.00 0.00
#> GTGTATCTGTTACG-1     2   0.000     0.9587 0.00 1.00
#> GTTAAATGTCGACA-1     2   0.000     0.9587 0.00 1.00
#> GTTAGGTGGAACTC-1     1   0.000     0.9589 1.00 0.00
#> TAAACAACGAATCC-1     2   0.000     0.9587 0.00 1.00
#> TAACAATGTGCCCT-1     1   0.141     0.9436 0.98 0.02
#> TAACATGACACTAG-1     2   0.000     0.9587 0.00 1.00
#> TAACTCACGTACAC-1     1   0.827     0.6550 0.74 0.26
#> TAAGAGGACTAAGC-1     2   0.000     0.9587 0.00 1.00
#> TAAGTAACCGAGAG-1     1   0.000     0.9589 1.00 0.00
#> TAAGTAACCTCCAC-1     1   0.000     0.9589 1.00 0.00
#> TACATCACGCTAAC-1     1   0.881     0.5825 0.70 0.30
#> TACGCCACTCCGAA-1     2   0.795     0.6960 0.24 0.76
#> TACGGAACGCGTTA-1     1   0.000     0.9589 1.00 0.00
#> TACGTACTCCCGTT-1     1   0.855     0.6244 0.72 0.28
#> TACTAAGAAAGGTA-1     1   0.000     0.9589 1.00 0.00
#> TACTACACTTACCT-1     1   0.000     0.9589 1.00 0.00
#> TACTCAACTGCTAG-1     2   0.634     0.8082 0.16 0.84
#> TACTCTGATTGACG-1     2   0.971     0.3514 0.40 0.60
#> TACTGTTGCTGAAC-1     2   0.000     0.9587 0.00 1.00
#> TACTTGACTGGTGT-1     1   0.000     0.9589 1.00 0.00
#> TAGAGCACCTTACT-1     1   0.000     0.9589 1.00 0.00
#> TAGATTGACTTGTT-1     1   0.000     0.9589 1.00 0.00
#> TAGCTACTGAATAG-1     1   0.000     0.9589 1.00 0.00
#> TAGGAGCTAAGGCG-1     1   0.000     0.9589 1.00 0.00
#> TAGGAGCTTGCATG-1     1   0.000     0.9589 1.00 0.00
#> TAGGCAACCGTCTC-1     1   0.141     0.9436 0.98 0.02
#> TAGGTCGAGGATCT-1     1   0.000     0.9589 1.00 0.00
#> TAGGTGACACGTTG-1     1   0.327     0.9099 0.94 0.06
#> TAGTATGATCTTAC-1     1   0.981     0.2925 0.58 0.42
#> TATACCACCTGATG-1     1   0.000     0.9589 1.00 0.00
#> TATGGGTGCTAGCA-1     2   0.000     0.9587 0.00 1.00
#> TATGTCACGGAACG-1     2   0.000     0.9587 0.00 1.00
#> TATGTCACTTCTCA-1     2   0.904     0.5477 0.32 0.68
#> TATTGCTGCCGTTC-1     1   0.000     0.9589 1.00 0.00
#> TCACGAGAGGAGGT-1     2   0.242     0.9300 0.04 0.96
#> TCACTATGGTTGTG-1     1   0.000     0.9589 1.00 0.00
#> TCAGCGCTGGATCT-1     1   0.000     0.9589 1.00 0.00
#> TCCACTCTTACTTC-1     1   0.000     0.9589 1.00 0.00
#> TCCATAACCGTAGT-1     2   0.000     0.9587 0.00 1.00
#> TCCCTACTCAACTG-1     1   0.000     0.9589 1.00 0.00
#> TCGAGCCTATCAGC-1     1   0.000     0.9589 1.00 0.00
#> TCGATTTGTCGTGA-1     2   0.000     0.9587 0.00 1.00
#> TCGCCATGTGGTCA-1     1   0.584     0.8273 0.86 0.14
#> TCGGACCTATAAGG-1     1   0.855     0.6207 0.72 0.28
#> TCGGTAGATCCCAC-1     1   0.958     0.4055 0.62 0.38
#> TCTAAGCTTTCGCC-1     1   0.000     0.9589 1.00 0.00
#> TCTCAAACCTAAGC-1     1   0.000     0.9589 1.00 0.00
#> TGAAGCTGCATGGT-1     2   0.000     0.9587 0.00 1.00
#> TGACACGACCTTAT-1     1   0.000     0.9589 1.00 0.00
#> TGACTGGAGGACAG-1     2   0.000     0.9587 0.00 1.00
#> TGAGTCGAGTTACG-1     1   0.000     0.9589 1.00 0.00
#> TGATCACTTCTACT-1     1   0.000     0.9589 1.00 0.00
#> TGATCGGAGGAGCA-1     1   0.000     0.9589 1.00 0.00
#> TGATTAGATGACTG-1     1   0.000     0.9589 1.00 0.00
#> TGATTCACTGTCAG-1     2   0.925     0.5007 0.34 0.66
#> TGCCGACTCTCCCA-1     1   0.000     0.9589 1.00 0.00
#> TGCGAAACAGTCAC-1     2   0.000     0.9587 0.00 1.00
#> TGCGAAACGTTGCA-1     1   0.000     0.9589 1.00 0.00
#> TGCGATGACTAGTG-1     2   0.000     0.9587 0.00 1.00
#> TGCGATGACTGCTC-1     1   0.634     0.8042 0.84 0.16
#> TGCGATGACTTGCC-1     2   0.242     0.9300 0.04 0.96
#> TGCGTAGACGGGAA-1     1   0.584     0.8269 0.86 0.14
#> TGGAAAGACTCTCG-1     1   0.990     0.2239 0.56 0.44
#> TGGATGTGACCTAG-1     1   0.000     0.9589 1.00 0.00
#> TGGATGTGTGAAGA-1     2   0.000     0.9587 0.00 1.00
#> TGGCAATGCTTGTT-1     2   0.958     0.3999 0.38 0.62
#> TGGGTATGGTACGT-1     1   0.000     0.9589 1.00 0.00
#> TGTAGGTGCGAGAG-1     1   0.000     0.9589 1.00 0.00
#> TGTATGCTCATGGT-1     1   0.000     0.9589 1.00 0.00
#> TGTGATCTCTCTAT-1     2   0.141     0.9450 0.02 0.98
#> TGTGGATGGCCAAT-1     1   0.000     0.9589 1.00 0.00
#> TTACCATGTTGTGG-1     1   0.000     0.9589 1.00 0.00
#> TTAGGGTGCTGGAT-1     2   0.000     0.9587 0.00 1.00
#> TTAGTCTGAAAGCA-1     2   0.000     0.9587 0.00 1.00
#> TTATCCGACTAGTG-1     1   0.000     0.9589 1.00 0.00
#> TTATGCACGTCACA-1     1   0.000     0.9589 1.00 0.00
#> TTATTCCTGGACAG-1     2   0.000     0.9587 0.00 1.00
#> TTATTCCTGGTACT-1     1   0.000     0.9589 1.00 0.00
#> TTCAGTTGTCTCGC-1     1   0.141     0.9436 0.98 0.02
#> TTCCAAACCTCCCA-1     2   0.000     0.9587 0.00 1.00
#> TTCTCAGAAGCATC-1     2   0.000     0.9587 0.00 1.00
#> TTGAACCTCCTTGC-1     1   0.000     0.9589 1.00 0.00
#> TTGAATGATCTCAT-1     2   0.000     0.9587 0.00 1.00
#> TTGACACTGATAAG-1     1   0.000     0.9589 1.00 0.00
#> TTGGAGACTATGGC-1     1   0.958     0.4015 0.62 0.38
#> TTGGTACTGAATCC-1     1   0.000     0.9589 1.00 0.00
#> TTGGTACTGGATTC-1     2   0.242     0.9293 0.04 0.96
#> TTGTACACGTTGTG-1     1   0.000     0.9589 1.00 0.00
#> TTGTAGCTCTCTTA-1     2   0.722     0.7563 0.20 0.80
#> TTTAGAGATCCTCG-1     2   0.000     0.9587 0.00 1.00
#> TTTCAGTGTCACGA-1     1   0.000     0.9589 1.00 0.00
#> TTTCAGTGTGCAGT-1     1   0.000     0.9589 1.00 0.00
#> TTTCGAACACCTGA-1     2   0.000     0.9587 0.00 1.00
#> TTTCTACTGAGGCA-1     2   0.000     0.9587 0.00 1.00
#> TTTCTACTTCCTCG-1     1   0.000     0.9589 1.00 0.00
#> TTTGCATGAGAGGC-1     1   0.000     0.9589 1.00 0.00

show/hide code output

cbind(get_classes(res, k = 3), get_membership(res, k = 3))
#>                  class entropy silhouette   p1   p2   p3
#> AAACATTGAGCTAC-1     2  0.0000   0.902848 0.00 1.00 0.00
#> AAACTTGAAAAACG-1     2  0.0000   0.902848 0.00 1.00 0.00
#> AAAGGCCTGTCTAG-1     2  0.0000   0.902848 0.00 1.00 0.00
#> AAAGTTTGATCACG-1     1  0.0000   0.851891 1.00 0.00 0.00
#> AAAGTTTGGGGTGA-1     2  0.0000   0.902848 0.00 1.00 0.00
#> AAATCAACAATGCC-1     2  0.0000   0.902848 0.00 1.00 0.00
#> AAATCCCTGCTATG-1     1  0.0000   0.851891 1.00 0.00 0.00
#> AACCGATGGTCATG-1     3  0.8892   0.145112 0.12 0.44 0.44
#> AACGTGTGGCGGAA-1     1  0.6924   0.135438 0.58 0.40 0.02
#> AACTTGCTACGCTA-1     2  0.0000   0.902848 0.00 1.00 0.00
#> AAGAAGACGTAGGG-1     1  0.6302  -0.042500 0.52 0.00 0.48
#> AAGACAGAAGTCTG-1     3  0.5948   0.499116 0.36 0.00 0.64
#> AAGAGATGGGTAGG-1     1  0.2537   0.826155 0.92 0.00 0.08
#> AAGATGGAAAACAG-1     1  0.0000   0.851891 1.00 0.00 0.00
#> AAGCACTGAGCAAA-1     2  0.0000   0.902848 0.00 1.00 0.00
#> AAGCACTGGTTCTT-1     2  0.0000   0.902848 0.00 1.00 0.00
#> AAGCGACTTACAGC-1     1  0.1529   0.844677 0.96 0.00 0.04
#> AAGGTCACTGTTTC-1     1  0.4555   0.715347 0.80 0.00 0.20
#> AAGTAACTGAGATA-1     1  0.0000   0.851891 1.00 0.00 0.00
#> AAGTGGCTTGGAGG-1     1  0.4002   0.768889 0.84 0.00 0.16
#> AATACCCTGGACGA-1     1  0.2066   0.835944 0.94 0.00 0.06
#> AATAGGGAACCCTC-1     2  0.0000   0.902848 0.00 1.00 0.00
#> AATCCGGAATGCTG-1     2  0.0000   0.902848 0.00 1.00 0.00
#> AATGCGTGACACCA-1     2  0.0000   0.902848 0.00 1.00 0.00
#> AATGCGTGGCTATG-1     2  0.5016   0.702284 0.00 0.76 0.24
#> AATGGCTGACACCA-1     2  0.0892   0.893823 0.00 0.98 0.02
#> AATTACGATTGGCA-1     3  0.6192   0.347043 0.42 0.00 0.58
#> AATTCCTGCTCAGA-1     3  0.2959   0.684076 0.00 0.10 0.90
#> AATTGTGACTTGGA-1     1  0.4291   0.733400 0.82 0.00 0.18
#> ACAAGAGAGTTGAC-1     1  0.3686   0.789900 0.86 0.00 0.14
#> ACAATCCTTAGCGT-1     3  0.6651   0.391410 0.02 0.34 0.64
#> ACATGGTGCAACCA-1     2  0.0000   0.902848 0.00 1.00 0.00
#> ACCAGTGAACGGTT-1     3  0.4291   0.703977 0.18 0.00 0.82
#> ACCCAAGATTCACT-1     1  0.0000   0.851891 1.00 0.00 0.00
#> ACCCGTTGATGACC-1     1  0.1529   0.844598 0.96 0.00 0.04
#> ACCCTCGACGGTAT-1     1  0.2537   0.822672 0.92 0.00 0.08
#> ACCGTGCTGGAACG-1     2  0.0000   0.902848 0.00 1.00 0.00
#> ACCTATTGCTGAGT-1     1  0.0892   0.848391 0.98 0.00 0.02
#> ACGAAGCTCTGAGT-1     2  0.0000   0.902848 0.00 1.00 0.00
#> ACGACCCTTGACAC-1     2  0.3686   0.813821 0.00 0.86 0.14
#> ACGAGTACCCTAAG-1     1  0.0892   0.847923 0.98 0.00 0.02
#> ACGAGTACGAATCC-1     2  0.0000   0.902848 0.00 1.00 0.00
#> ACGCACCTGTTAGC-1     1  0.2537   0.826617 0.92 0.00 0.08
#> ACGCGGTGTGTGGT-1     2  0.0000   0.902848 0.00 1.00 0.00
#> ACGGATTGGGAGGT-1     1  0.3686   0.784317 0.86 0.00 0.14
#> ACGGTATGGGTATC-1     2  0.5835   0.528874 0.00 0.66 0.34
#> ACGGTATGGTTGTG-1     1  0.4291   0.750900 0.82 0.00 0.18
#> ACGTAGACTACAGC-1     3  0.0000   0.705237 0.00 0.00 1.00
#> ACGTCGCTTCTCAT-1     1  0.0000   0.851891 1.00 0.00 0.00
#> ACGTTGGATATGGC-1     1  0.0000   0.851891 1.00 0.00 0.00
#> ACTCAGGATCTATC-1     3  0.2537   0.695804 0.00 0.08 0.92
#> ACTCTCCTGCATAC-1     2  0.0000   0.902848 0.00 1.00 0.00
#> ACTGAGACGTTGGT-1     2  0.0000   0.902848 0.00 1.00 0.00
#> ACTGTGGATCTAGG-1     2  0.0000   0.902848 0.00 1.00 0.00
#> ACTTCTGACATGCA-1     1  0.0892   0.848617 0.98 0.00 0.02
#> ACTTGACTCCACAA-1     2  0.0000   0.902848 0.00 1.00 0.00
#> AGAAACGAAAGTAG-1     1  0.1529   0.841444 0.96 0.00 0.04
#> AGAACAGACGACTA-1     1  0.3686   0.782791 0.86 0.00 0.14
#> AGACGTACCCCTAC-1     1  0.5706   0.544554 0.68 0.00 0.32
#> AGACTTCTCATGCA-1     1  0.0000   0.851891 1.00 0.00 0.00
#> AGAGATGACAGTCA-1     1  0.0000   0.851891 1.00 0.00 0.00
#> AGAGATGATCTCGC-1     2  0.0000   0.902848 0.00 1.00 0.00
#> AGAGTGCTGTGTTG-1     3  0.9315   0.582127 0.26 0.22 0.52
#> AGATATACTGTTCT-1     2  0.0000   0.902848 0.00 1.00 0.00
#> AGATCGTGTTTGTC-1     3  0.2066   0.723459 0.06 0.00 0.94
#> AGATCTCTATCACG-1     1  0.1529   0.844007 0.96 0.00 0.04
#> AGCATCGAAGGGTG-1     3  0.6633   0.536522 0.04 0.26 0.70
#> AGCCTCTGCAGTTG-1     1  0.0892   0.848673 0.98 0.00 0.02
#> AGCTTTACTCTCAT-1     2  0.0000   0.902848 0.00 1.00 0.00
#> AGGATGCTACTAGC-1     1  0.6651   0.423591 0.64 0.02 0.34
#> AGGGTGGACAGTCA-1     2  0.0000   0.902848 0.00 1.00 0.00
#> AGGTCATGAGTGTC-1     1  0.0000   0.851891 1.00 0.00 0.00
#> AGGTGTTGGTTACG-1     3  0.9462   0.317349 0.18 0.40 0.42
#> AGTAATACCGAACT-1     1  0.0000   0.851891 1.00 0.00 0.00
#> AGTACTCTACGTGT-1     3  0.6192   0.346620 0.42 0.00 0.58
#> ATAAACACAGTGCT-1     2  0.0892   0.893823 0.00 0.98 0.02
#> ATAAGTACGAATGA-1     1  0.0892   0.847709 0.98 0.00 0.02
#> ATAATCGAGCTGAT-1     1  0.4555   0.717163 0.80 0.00 0.20
#> ATACGGACGAGGTG-1     1  0.2537   0.828848 0.92 0.00 0.08
#> ATACGGACTATGCG-1     1  0.0892   0.848622 0.98 0.00 0.02
#> ATAGATTGGTGTAC-1     2  0.0000   0.902848 0.00 1.00 0.00
#> ATCACGGATTTCGT-1     2  0.4291   0.767099 0.00 0.82 0.18
#> ATCATGCTGAACCT-1     2  0.0000   0.902848 0.00 1.00 0.00
#> ATCCCGTGCATGCA-1     1  0.0000   0.851891 1.00 0.00 0.00
#> ATCCCGTGGCTGAT-1     2  0.2066   0.872441 0.00 0.94 0.06
#> ATCCGCACGCATCA-1     2  0.0892   0.893358 0.00 0.98 0.02
#> ATCCTAACGACGGA-1     1  0.2066   0.838046 0.94 0.00 0.06
#> ATCGCAGAGTGTCA-1     3  0.4555   0.605667 0.00 0.20 0.80
#> ATCGCCTGTGGCAT-1     1  0.0000   0.851891 1.00 0.00 0.00
#> ATCGCGCTTTTCGT-1     1  0.9566  -0.235666 0.44 0.20 0.36
#> ATCTCAACAGGAGC-1     3  0.1529   0.718120 0.04 0.00 0.96
#> ATGAAGGACCTGTC-1     3  0.7586   0.037854 0.04 0.48 0.48
#> ATGAAGGACCTTAT-1     1  0.1529   0.843467 0.96 0.00 0.04
#> ATGAAGGACTAGTG-1     1  0.0000   0.851891 1.00 0.00 0.00
#> ATGACGTGACGACT-1     1  0.1529   0.844598 0.96 0.00 0.04
#> ATGAGAGAAGTAGA-1     3  0.4002   0.705220 0.16 0.00 0.84
#> ATGCACGAATGTCG-1     1  0.0000   0.851891 1.00 0.00 0.00
#> ATGCACGAGAACCT-1     2  0.0000   0.902848 0.00 1.00 0.00
#> ATGCAGTGTTACCT-1     1  0.2537   0.828892 0.92 0.00 0.08
#> ATGCGATGGTTACG-1     2  0.1529   0.883562 0.00 0.96 0.04
#> ATGCTTTGTAGTCG-1     1  0.5835   0.453616 0.66 0.00 0.34
#> ATGGGTACAACCTG-1     1  0.2959   0.814463 0.90 0.00 0.10
#> ATTGCTTGTTACTC-1     2  0.0892   0.893608 0.00 0.98 0.02
#> ATTGGTCTGACTAC-1     2  0.0000   0.902848 0.00 1.00 0.00
#> ATTGGTCTTGTCTT-1     1  0.0000   0.851891 1.00 0.00 0.00
#> CAAAGCACCGTAAC-1     2  0.2414   0.871669 0.02 0.94 0.04
#> CAAGACTGACCTGA-1     1  0.3340   0.794116 0.88 0.00 0.12
#> CAAGACTGAGTAGA-1     2  0.0000   0.902848 0.00 1.00 0.00
#> CAAGGTTGTCATTC-1     1  0.5397   0.603436 0.72 0.00 0.28
#> CAAGTCGAAACAGA-1     2  0.0892   0.893512 0.00 0.98 0.02
#> CACAGAACCCTTGC-1     2  0.0892   0.893796 0.00 0.98 0.02
#> CACCGTACTAAGGA-1     1  0.5948   0.436321 0.64 0.00 0.36
#> CACCTGACGAAAGT-1     2  0.6244   0.282902 0.00 0.56 0.44
#> CACGAAACTTCCGC-1     3  0.9162   0.509114 0.34 0.16 0.50
#> CACGACCTCGATAC-1     1  0.0892   0.847777 0.98 0.00 0.02
#> CACGCTACTGTTCT-1     3  0.6192   0.369625 0.42 0.00 0.58
#> CACTAACTCCTAAG-1     2  0.4291   0.763148 0.00 0.82 0.18
#> CACTAGGATGATGC-1     1  0.0000   0.851891 1.00 0.00 0.00
#> CACTATACCCCGTT-1     2  0.0000   0.902848 0.00 1.00 0.00
#> CACTTAACCGTACA-1     1  0.4291   0.747248 0.82 0.00 0.18
#> CAGATCGAATGTCG-1     2  0.4291   0.766684 0.00 0.82 0.18
#> CAGGCCGACTAGCA-1     2  0.5706   0.571811 0.00 0.68 0.32
#> CAGGGCACCATACG-1     1  0.0000   0.851891 1.00 0.00 0.00
#> CAGGTTGAGGATCT-1     2  0.0000   0.902848 0.00 1.00 0.00
#> CAGTGATGGACGGA-1     1  0.0000   0.851891 1.00 0.00 0.00
#> CAGTGATGTAAGGA-1     2  0.3340   0.830192 0.00 0.88 0.12
#> CAGTGATGTACGCA-1     1  0.0000   0.851891 1.00 0.00 0.00
#> CAGTTACTAAGGTA-1     2  0.0000   0.902848 0.00 1.00 0.00
#> CATATAGATCAGGT-1     2  0.4796   0.715788 0.00 0.78 0.22
#> CATCATACGGAGCA-1     1  0.2066   0.840216 0.94 0.00 0.06
#> CATCGCTGTGGCAT-1     1  0.6109   0.685520 0.78 0.08 0.14
#> CATCTCCTATGTGC-1     3  0.9444   0.324309 0.18 0.38 0.44
#> CATGAGACACGGGA-1     1  0.1529   0.841959 0.96 0.00 0.04
#> CATTACACACGGAG-1     1  0.0000   0.851891 1.00 0.00 0.00
#> CATTGTACTCGATG-1     2  0.0000   0.902848 0.00 1.00 0.00
#> CATTTGTGACGACT-1     2  0.0000   0.902848 0.00 1.00 0.00
#> CATTTGTGGGATCT-1     2  0.1529   0.884268 0.00 0.96 0.04
#> CCAAGAACTCCTAT-1     1  0.6126   0.262085 0.60 0.00 0.40
#> CCAGAAACCCTGTC-1     1  0.4796   0.706856 0.78 0.00 0.22
#> CCAGACCTCTGAGT-1     1  0.0000   0.851891 1.00 0.00 0.00
#> CCAGCTACCAGCTA-1     1  0.3686   0.788799 0.86 0.00 0.14
#> CCAGGTCTACACCA-1     3  0.3340   0.721102 0.12 0.00 0.88
#> CCAGTCACACTGTG-1     3  0.7825   0.603345 0.30 0.08 0.62
#> CCATCCGAAGGTTC-1     1  0.4796   0.698539 0.78 0.00 0.22
#> CCCAACACCTCGCT-1     2  0.0000   0.902848 0.00 1.00 0.00
#> CCCAGACTGGTTTG-1     2  0.0000   0.902848 0.00 1.00 0.00
#> CCCAGTTGTCTATC-1     1  0.3686   0.790967 0.86 0.00 0.14
#> CCCTCAGACACTTT-1     2  0.3686   0.811227 0.00 0.86 0.14
#> CCCTGAACTAAAGG-1     1  0.2066   0.837532 0.94 0.00 0.06
#> CCCTGATGCAAGCT-1     2  0.7059   0.133772 0.02 0.52 0.46
#> CCGCTATGGGACGA-1     1  0.6387   0.524240 0.68 0.02 0.30
#> CCGTACACAGCGTT-1     2  0.0000   0.902848 0.00 1.00 0.00
#> CCTACCGAGGGATG-1     2  0.0000   0.902848 0.00 1.00 0.00
#> CCTAGAGAGGTGAG-1     1  0.0000   0.851891 1.00 0.00 0.00
#> CCTGACTGTGTCTT-1     1  0.6244   0.193103 0.56 0.00 0.44
#> CCTTAATGCCCAAA-1     1  0.7555   0.065387 0.52 0.04 0.44
#> CCTTCACTCAGTCA-1     2  0.0892   0.894044 0.00 0.98 0.02
#> CGAAGGGATCCGAA-1     2  0.0000   0.902848 0.00 1.00 0.00
#> CGAAGTACCAACTG-1     1  0.6192   0.221808 0.58 0.00 0.42
#> CGACAAACCGACAT-1     2  0.0000   0.902848 0.00 1.00 0.00
#> CGAGGAGACCTCCA-1     3  0.5397   0.627187 0.28 0.00 0.72
#> CGAGGGCTACGACT-1     1  0.0000   0.851891 1.00 0.00 0.00
#> CGATACGATTCACT-1     3  0.4821   0.725671 0.12 0.04 0.84
#> CGATCCACTTCCAT-1     1  0.0000   0.851891 1.00 0.00 0.00
#> CGCACGGAGGACGA-1     3  0.5706   0.541303 0.32 0.00 0.68
#> CGCACTACTCGCCT-1     1  0.1529   0.843499 0.96 0.00 0.04
#> CGCCATTGGAGCAG-1     2  0.0000   0.902848 0.00 1.00 0.00
#> CGCCATTGTACTGG-1     2  0.6192   0.352238 0.00 0.58 0.42
#> CGCGAGACAGGTCT-1     2  0.0000   0.902848 0.00 1.00 0.00
#> CGCGATCTTTCTTG-1     2  0.5706   0.551141 0.00 0.68 0.32
#> CGGACTCTAAACAG-1     1  0.3686   0.793104 0.86 0.00 0.14
#> CTAAACCTGTGCAT-1     2  0.0000   0.902848 0.00 1.00 0.00
#> CTAAGGTGCCTAAG-1     1  0.1529   0.843477 0.96 0.00 0.04
#> CTACTATGTAAAGG-1     1  0.0000   0.851891 1.00 0.00 0.00
#> CTAGGATGAGCCTA-1     2  0.0000   0.902848 0.00 1.00 0.00
#> CTAGGATGATCGTG-1     2  0.0000   0.902848 0.00 1.00 0.00
#> CTATAAGATCGTTT-1     2  0.5016   0.689468 0.00 0.76 0.24
#> CTATGTACTGTTTC-1     2  0.0000   0.902848 0.00 1.00 0.00
#> CTGAAGACGTGCAT-1     2  0.0892   0.893823 0.00 0.98 0.02
#> CTGAAGTGCAGCTA-1     3  0.5397   0.615853 0.28 0.00 0.72
#> CTGGATGATGTGAC-1     1  0.0000   0.851891 1.00 0.00 0.00
#> CTTAACACTATCGG-1     3  0.5560   0.611329 0.30 0.00 0.70
#> CTTAAGCTCCGCTT-1     2  0.0000   0.902848 0.00 1.00 0.00
#> CTTCATGAAGCATC-1     1  0.5706   0.551751 0.68 0.00 0.32
#> CTTGTATGACACCA-1     3  0.4796   0.590962 0.00 0.22 0.78
#> CTTGTATGCGCAAT-1     1  0.0000   0.851891 1.00 0.00 0.00
#> GAAAGCCTACGTTG-1     3  0.7725   0.695133 0.16 0.16 0.68
#> GAAATACTCTTAGG-1     1  0.5216   0.642328 0.74 0.00 0.26
#> GAAGTCACCCTGTC-1     3  0.6758   0.524416 0.36 0.02 0.62
#> GAAGTCTGTCGCAA-1     3  0.3832   0.728299 0.10 0.02 0.88
#> GAATTAACTGAAGA-1     2  0.0000   0.902848 0.00 1.00 0.00
#> GACAGGGAAGAGTA-1     3  0.5948   0.490556 0.36 0.00 0.64
#> GACAGTTGAGTAGA-1     2  0.0000   0.902848 0.00 1.00 0.00
#> GACCCTACTAAAGG-1     3  0.2537   0.720310 0.08 0.00 0.92
#> GACGATTGCCAATG-1     1  0.0892   0.848548 0.98 0.00 0.02
#> GACGTCCTGATAAG-1     2  0.5560   0.610754 0.00 0.70 0.30
#> GACTACGATGGTCA-1     1  0.4002   0.769446 0.84 0.00 0.16
#> GACTTTACGACAGG-1     2  0.9162  -0.039673 0.34 0.50 0.16
#> GAGAAATGTTCTCA-1     2  0.7344   0.450137 0.24 0.68 0.08
#> GAGCGGCTGGGAGT-1     1  0.0892   0.848745 0.98 0.00 0.02
#> GAGGATCTGAAAGT-1     1  0.2537   0.827628 0.92 0.00 0.08
#> GAGTCTGATTTGGG-1     1  0.2066   0.838488 0.94 0.00 0.06
#> GAGTGACTCTTGCC-1     2  0.7555   0.095752 0.04 0.52 0.44
#> GAGTGACTGACTAC-1     1  0.0000   0.851891 1.00 0.00 0.00
#> GAGTGGGAGTCTTT-1     1  0.6176   0.653308 0.78 0.10 0.12
#> GAGTGGGATGCTGA-1     1  0.0000   0.851891 1.00 0.00 0.00
#> GATCGATGACTAGC-1     2  0.6302   0.159130 0.00 0.52 0.48
#> GATCGATGGTAAAG-1     1  0.0000   0.851891 1.00 0.00 0.00
#> GATCTACTTTGCAG-1     3  0.2066   0.721531 0.06 0.00 0.94
#> GATTCTTGCGAGTT-1     1  0.4291   0.751137 0.82 0.00 0.18
#> GATTGGACCCGTTC-1     2  0.0000   0.902848 0.00 1.00 0.00
#> GATTGGACGGTGTT-1     1  0.3340   0.804725 0.88 0.00 0.12
#> GATTGGACTTTCGT-1     1  0.5016   0.672708 0.76 0.00 0.24
#> GATTTAGACTAAGC-1     2  0.0000   0.902848 0.00 1.00 0.00
#> GCACTAGAAGATGA-1     1  0.5706   0.547983 0.68 0.00 0.32
#> GCACTAGACGTAAC-1     1  0.0000   0.851891 1.00 0.00 0.00
#> GCCTAGCTACGGAG-1     1  0.0000   0.851891 1.00 0.00 0.00
#> GCGAGCACTGTCGA-1     1  0.0000   0.851891 1.00 0.00 0.00
#> GCGCGAACGTTCTT-1     3  0.5970   0.723454 0.16 0.06 0.78
#> GCGGCAACGGAGGT-1     1  0.2066   0.835635 0.94 0.00 0.06
#> GCTACAGAATCTTC-1     1  0.0000   0.851891 1.00 0.00 0.00
#> GCTAGAACAGAGGC-1     1  0.6309  -0.145019 0.50 0.00 0.50
#> GGAACTTGGGTAGG-1     1  0.0000   0.851891 1.00 0.00 0.00
#> GGAATCTGCTTAGG-1     1  0.0892   0.848419 0.98 0.00 0.02
#> GGACAGGAGTGCTA-1     2  0.6045   0.443513 0.00 0.62 0.38
#> GGAGCAGATTCAGG-1     1  0.1529   0.843351 0.96 0.00 0.04
#> GGAGCCACCTTCTA-1     2  0.0000   0.902848 0.00 1.00 0.00
#> GGATGTACCAAAGA-1     1  0.5706   0.526433 0.68 0.00 0.32
#> GGCAATACGCTAAC-1     1  0.2537   0.823401 0.92 0.00 0.08
#> GGCAATACGTTTCT-1     2  0.3686   0.811263 0.00 0.86 0.14
#> GGGAACGACACAAC-1     1  0.0000   0.851891 1.00 0.00 0.00
#> GGGACCTGTGGAGG-1     1  0.5397   0.610494 0.72 0.00 0.28
#> GGGATGGACGACAT-1     1  0.3832   0.788181 0.88 0.02 0.10
#> GGGCCAACGCGTTA-1     2  0.0000   0.902848 0.00 1.00 0.00
#> GGGCCAACTCCAAG-1     3  0.6924   0.240837 0.02 0.40 0.58
#> GGGTAACTCTAGTG-1     1  0.5835   0.496226 0.66 0.00 0.34
#> GGTACATGAAAGCA-1     3  0.6387   0.592914 0.30 0.02 0.68
#> GGTATCGATGAACC-1     1  0.0000   0.851891 1.00 0.00 0.00
#> GGTGATACCGACTA-1     1  0.6280   0.000185 0.54 0.00 0.46
#> GTAACGTGATCGGT-1     3  0.3686   0.715695 0.14 0.00 0.86
#> GTAACGTGCAGCTA-1     2  0.9566  -0.199315 0.20 0.44 0.36
#> GTAACGTGGTTGAC-1     2  0.3686   0.813091 0.00 0.86 0.14
#> GTAAGCACTCATTC-1     1  0.2537   0.825877 0.92 0.00 0.08
#> GTAGCAACCATTTC-1     3  0.9178   0.611393 0.22 0.24 0.54
#> GTAGCATGCACTCC-1     1  0.0000   0.851891 1.00 0.00 0.00
#> GTCATACTAATCGC-1     3  0.9083   0.604219 0.28 0.18 0.54
#> GTCGCACTTGAGAA-1     2  0.0000   0.902848 0.00 1.00 0.00
#> GTGATGACCTGAGT-1     1  0.0000   0.851891 1.00 0.00 0.00
#> GTGATTCTTAGCGT-1     1  0.1529   0.841959 0.96 0.00 0.04
#> GTGTATCTAGCCTA-1     1  0.1529   0.843520 0.96 0.00 0.04
#> GTGTATCTGTTACG-1     2  0.2537   0.860700 0.00 0.92 0.08
#> GTTAAATGTCGACA-1     2  0.2537   0.859074 0.00 0.92 0.08
#> GTTAGGTGGAACTC-1     1  0.2537   0.821461 0.92 0.00 0.08
#> TAAACAACGAATCC-1     2  0.0892   0.893903 0.00 0.98 0.02
#> TAACAATGTGCCCT-1     1  0.4796   0.709465 0.78 0.00 0.22
#> TAACATGACACTAG-1     2  0.0000   0.902848 0.00 1.00 0.00
#> TAACTCACGTACAC-1     3  0.4002   0.708403 0.16 0.00 0.84
#> TAAGAGGACTAAGC-1     2  0.4551   0.799704 0.02 0.84 0.14
#> TAAGTAACCGAGAG-1     1  0.0000   0.851891 1.00 0.00 0.00
#> TAAGTAACCTCCAC-1     1  0.0000   0.851891 1.00 0.00 0.00
#> TACATCACGCTAAC-1     3  0.5416   0.732312 0.10 0.08 0.82
#> TACGCCACTCCGAA-1     2  0.7138   0.579990 0.16 0.72 0.12
#> TACGGAACGCGTTA-1     1  0.2066   0.835051 0.94 0.00 0.06
#> TACGTACTCCCGTT-1     3  0.4449   0.735037 0.10 0.04 0.86
#> TACTAAGAAAGGTA-1     1  0.0000   0.851891 1.00 0.00 0.00
#> TACTACACTTACCT-1     1  0.0000   0.851891 1.00 0.00 0.00
#> TACTCAACTGCTAG-1     2  0.7398   0.544804 0.12 0.70 0.18
#> TACTCTGATTGACG-1     3  0.5416   0.724689 0.08 0.10 0.82
#> TACTGTTGCTGAAC-1     2  0.0000   0.902848 0.00 1.00 0.00
#> TACTTGACTGGTGT-1     1  0.0000   0.851891 1.00 0.00 0.00
#> TAGAGCACCTTACT-1     1  0.0892   0.848673 0.98 0.00 0.02
#> TAGATTGACTTGTT-1     1  0.0000   0.851891 1.00 0.00 0.00
#> TAGCTACTGAATAG-1     1  0.2537   0.830062 0.92 0.00 0.08
#> TAGGAGCTAAGGCG-1     3  0.6126   0.389953 0.40 0.00 0.60
#> TAGGAGCTTGCATG-1     1  0.0000   0.851891 1.00 0.00 0.00
#> TAGGCAACCGTCTC-1     3  0.6126   0.445390 0.40 0.00 0.60
#> TAGGTCGAGGATCT-1     1  0.0000   0.851891 1.00 0.00 0.00
#> TAGGTGACACGTTG-1     3  0.2959   0.719642 0.10 0.00 0.90
#> TAGTATGATCTTAC-1     3  0.9657   0.532700 0.30 0.24 0.46
#> TATACCACCTGATG-1     3  0.2959   0.720091 0.10 0.00 0.90
#> TATGGGTGCTAGCA-1     2  0.0000   0.902848 0.00 1.00 0.00
#> TATGTCACGGAACG-1     2  0.0000   0.902848 0.00 1.00 0.00
#> TATGTCACTTCTCA-1     3  0.5147   0.631815 0.02 0.18 0.80
#> TATTGCTGCCGTTC-1     1  0.0000   0.851891 1.00 0.00 0.00
#> TCACGAGAGGAGGT-1     2  0.3042   0.854677 0.04 0.92 0.04
#> TCACTATGGTTGTG-1     1  0.0000   0.851891 1.00 0.00 0.00
#> TCAGCGCTGGATCT-1     1  0.0892   0.848745 0.98 0.00 0.02
#> TCCACTCTTACTTC-1     3  0.6126   0.380211 0.40 0.00 0.60
#> TCCATAACCGTAGT-1     2  0.0000   0.902848 0.00 1.00 0.00
#> TCCCTACTCAACTG-1     1  0.6126   0.331001 0.60 0.00 0.40
#> TCGAGCCTATCAGC-1     1  0.5560   0.517551 0.70 0.00 0.30
#> TCGATTTGTCGTGA-1     2  0.4555   0.746032 0.00 0.80 0.20
#> TCGCCATGTGGTCA-1     3  0.2959   0.720552 0.10 0.00 0.90
#> TCGGACCTATAAGG-1     1  0.8472   0.014990 0.54 0.10 0.36
#> TCGGTAGATCCCAC-1     1  0.9462  -0.219605 0.42 0.40 0.18
#> TCTAAGCTTTCGCC-1     1  0.0000   0.851891 1.00 0.00 0.00
#> TCTCAAACCTAAGC-1     1  0.0000   0.851891 1.00 0.00 0.00
#> TGAAGCTGCATGGT-1     2  0.1529   0.883039 0.00 0.96 0.04
#> TGACACGACCTTAT-1     1  0.0000   0.851891 1.00 0.00 0.00
#> TGACTGGAGGACAG-1     2  0.5216   0.665793 0.00 0.74 0.26
#> TGAGTCGAGTTACG-1     1  0.1529   0.845733 0.96 0.00 0.04
#> TGATCACTTCTACT-1     1  0.0892   0.847777 0.98 0.00 0.02
#> TGATCGGAGGAGCA-1     1  0.1529   0.843477 0.96 0.00 0.04
#> TGATTAGATGACTG-1     1  0.0000   0.851891 1.00 0.00 0.00
#> TGATTCACTGTCAG-1     3  0.8202   0.574784 0.12 0.26 0.62
#> TGCCGACTCTCCCA-1     3  0.6045   0.411847 0.38 0.00 0.62
#> TGCGAAACAGTCAC-1     2  0.3686   0.814194 0.00 0.86 0.14
#> TGCGAAACGTTGCA-1     1  0.3686   0.776256 0.86 0.00 0.14
#> TGCGATGACTAGTG-1     2  0.0000   0.902848 0.00 1.00 0.00
#> TGCGATGACTGCTC-1     3  0.0892   0.704411 0.00 0.02 0.98
#> TGCGATGACTTGCC-1     2  0.6000   0.682581 0.04 0.76 0.20
#> TGCGTAGACGGGAA-1     3  0.4796   0.682679 0.22 0.00 0.78
#> TGGAAAGACTCTCG-1     3  0.2414   0.721571 0.04 0.02 0.94
#> TGGATGTGACCTAG-1     1  0.4555   0.735081 0.80 0.00 0.20
#> TGGATGTGTGAAGA-1     2  0.0892   0.893823 0.00 0.98 0.02
#> TGGCAATGCTTGTT-1     3  0.8143   0.398471 0.08 0.36 0.56
#> TGGGTATGGTACGT-1     1  0.0000   0.851891 1.00 0.00 0.00
#> TGTAGGTGCGAGAG-1     1  0.0000   0.851891 1.00 0.00 0.00
#> TGTATGCTCATGGT-1     1  0.5835   0.504325 0.66 0.00 0.34
#> TGTGATCTCTCTAT-1     2  0.5416   0.758346 0.08 0.82 0.10
#> TGTGGATGGCCAAT-1     1  0.6302   0.062769 0.52 0.00 0.48
#> TTACCATGTTGTGG-1     1  0.1529   0.844419 0.96 0.00 0.04
#> TTAGGGTGCTGGAT-1     2  0.2537   0.858457 0.00 0.92 0.08
#> TTAGTCTGAAAGCA-1     2  0.0000   0.902848 0.00 1.00 0.00
#> TTATCCGACTAGTG-1     1  0.5016   0.669379 0.76 0.00 0.24
#> TTATGCACGTCACA-1     1  0.5397   0.617025 0.72 0.00 0.28
#> TTATTCCTGGACAG-1     2  0.0892   0.893358 0.00 0.98 0.02
#> TTATTCCTGGTACT-1     1  0.4002   0.771091 0.84 0.00 0.16
#> TTCAGTTGTCTCGC-1     3  0.5397   0.617395 0.28 0.00 0.72
#> TTCCAAACCTCCCA-1     2  0.0000   0.902848 0.00 1.00 0.00
#> TTCTCAGAAGCATC-1     2  0.2959   0.844726 0.00 0.90 0.10
#> TTGAACCTCCTTGC-1     1  0.5948   0.420282 0.64 0.00 0.36
#> TTGAATGATCTCAT-1     2  0.0000   0.902848 0.00 1.00 0.00
#> TTGACACTGATAAG-1     1  0.5397   0.632594 0.72 0.00 0.28
#> TTGGAGACTATGGC-1     3  0.6407   0.724403 0.16 0.08 0.76
#> TTGGTACTGAATCC-1     3  0.5948   0.478634 0.36 0.00 0.64
#> TTGGTACTGGATTC-1     3  0.2959   0.679744 0.00 0.10 0.90
#> TTGTACACGTTGTG-1     3  0.6309   0.083402 0.50 0.00 0.50
#> TTGTAGCTCTCTTA-1     2  0.8199   0.403136 0.20 0.64 0.16
#> TTTAGAGATCCTCG-1     2  0.0892   0.893454 0.00 0.98 0.02
#> TTTCAGTGTCACGA-1     1  0.5835   0.489044 0.66 0.00 0.34
#> TTTCAGTGTGCAGT-1     1  0.1529   0.844863 0.96 0.00 0.04
#> TTTCGAACACCTGA-1     2  0.0000   0.902848 0.00 1.00 0.00
#> TTTCTACTGAGGCA-1     2  0.0000   0.902848 0.00 1.00 0.00
#> TTTCTACTTCCTCG-1     1  0.5948   0.443005 0.64 0.00 0.36
#> TTTGCATGAGAGGC-1     1  0.4002   0.767178 0.84 0.00 0.16

show/hide code output

cbind(get_classes(res, k = 4), get_membership(res, k = 4))
#>                  class entropy silhouette   p1   p2   p3   p4
#> AAACATTGAGCTAC-1     2  0.0000    0.83658 0.00 1.00 0.00 0.00
#> AAACTTGAAAAACG-1     2  0.0707    0.83154 0.00 0.98 0.00 0.02
#> AAAGGCCTGTCTAG-1     2  0.0000    0.83658 0.00 1.00 0.00 0.00
#> AAAGTTTGATCACG-1     1  0.0000    0.77769 1.00 0.00 0.00 0.00
#> AAAGTTTGGGGTGA-1     2  0.1637    0.82188 0.00 0.94 0.00 0.06
#> AAATCAACAATGCC-1     2  0.1211    0.82894 0.00 0.96 0.00 0.04
#> AAATCCCTGCTATG-1     1  0.0000    0.77769 1.00 0.00 0.00 0.00
#> AACCGATGGTCATG-1     3  0.8621   -0.11499 0.04 0.22 0.40 0.34
#> AACGTGTGGCGGAA-1     1  0.9557   -0.34302 0.34 0.24 0.12 0.30
#> AACTTGCTACGCTA-1     2  0.0000    0.83658 0.00 1.00 0.00 0.00
#> AAGAAGACGTAGGG-1     3  0.7602    0.15277 0.38 0.00 0.42 0.20
#> AAGACAGAAGTCTG-1     3  0.7485    0.16970 0.38 0.00 0.44 0.18
#> AAGAGATGGGTAGG-1     1  0.6513    0.58568 0.64 0.00 0.18 0.18
#> AAGATGGAAAACAG-1     1  0.2011    0.77785 0.92 0.00 0.08 0.00
#> AAGCACTGAGCAAA-1     2  0.0707    0.83215 0.00 0.98 0.00 0.02
#> AAGCACTGGTTCTT-1     2  0.0000    0.83658 0.00 1.00 0.00 0.00
#> AAGCGACTTACAGC-1     1  0.3611    0.75751 0.86 0.00 0.08 0.06
#> AAGGTCACTGTTTC-1     1  0.6366    0.52751 0.64 0.00 0.24 0.12
#> AAGTAACTGAGATA-1     1  0.0000    0.77769 1.00 0.00 0.00 0.00
#> AAGTGGCTTGGAGG-1     1  0.5956    0.59600 0.68 0.00 0.22 0.10
#> AATACCCTGGACGA-1     1  0.3335    0.76644 0.86 0.00 0.12 0.02
#> AATAGGGAACCCTC-1     2  0.0000    0.83658 0.00 1.00 0.00 0.00
#> AATCCGGAATGCTG-1     2  0.0000    0.83658 0.00 1.00 0.00 0.00
#> AATGCGTGACACCA-1     2  0.0707    0.83215 0.00 0.98 0.00 0.02
#> AATGCGTGGCTATG-1     2  0.6617    0.39964 0.00 0.60 0.12 0.28
#> AATGGCTGACACCA-1     2  0.0707    0.83168 0.00 0.98 0.00 0.02
#> AATTACGATTGGCA-1     3  0.7805    0.19719 0.28 0.00 0.42 0.30
#> AATTCCTGCTCAGA-1     3  0.5355    0.14837 0.00 0.02 0.62 0.36
#> AATTGTGACTTGGA-1     1  0.7028    0.32696 0.56 0.00 0.28 0.16
#> ACAAGAGAGTTGAC-1     1  0.5327    0.68191 0.72 0.00 0.22 0.06
#> ACAATCCTTAGCGT-1     3  0.7768   -0.12732 0.00 0.24 0.40 0.36
#> ACATGGTGCAACCA-1     2  0.3172    0.77186 0.00 0.84 0.00 0.16
#> ACCAGTGAACGGTT-1     3  0.5489    0.25195 0.06 0.00 0.70 0.24
#> ACCCAAGATTCACT-1     1  0.4610    0.74302 0.80 0.00 0.10 0.10
#> ACCCGTTGATGACC-1     1  0.2411    0.78378 0.92 0.00 0.04 0.04
#> ACCCTCGACGGTAT-1     1  0.3853    0.74851 0.82 0.00 0.16 0.02
#> ACCGTGCTGGAACG-1     2  0.3975    0.69658 0.00 0.76 0.00 0.24
#> ACCTATTGCTGAGT-1     1  0.2345    0.77513 0.90 0.00 0.10 0.00
#> ACGAAGCTCTGAGT-1     2  0.0000    0.83658 0.00 1.00 0.00 0.00
#> ACGACCCTTGACAC-1     2  0.5428    0.45584 0.00 0.60 0.02 0.38
#> ACGAGTACCCTAAG-1     1  0.2411    0.78302 0.92 0.00 0.04 0.04
#> ACGAGTACGAATCC-1     2  0.0000    0.83658 0.00 1.00 0.00 0.00
#> ACGCACCTGTTAGC-1     1  0.5151    0.69066 0.76 0.00 0.14 0.10
#> ACGCGGTGTGTGGT-1     2  0.0707    0.83285 0.00 0.98 0.00 0.02
#> ACGGATTGGGAGGT-1     1  0.3606    0.74921 0.84 0.00 0.14 0.02
#> ACGGTATGGGTATC-1     3  0.7855   -0.16044 0.00 0.30 0.40 0.30
#> ACGGTATGGTTGTG-1     1  0.7095    0.39068 0.56 0.00 0.18 0.26
#> ACGTAGACTACAGC-1     3  0.5767    0.23977 0.06 0.00 0.66 0.28
#> ACGTCGCTTCTCAT-1     1  0.1411    0.78407 0.96 0.00 0.02 0.02
#> ACGTTGGATATGGC-1     1  0.3037    0.77891 0.88 0.00 0.10 0.02
#> ACTCAGGATCTATC-1     4  0.7499    0.06204 0.00 0.18 0.40 0.42
#> ACTCTCCTGCATAC-1     2  0.0000    0.83658 0.00 1.00 0.00 0.00
#> ACTGAGACGTTGGT-1     2  0.2345    0.81023 0.00 0.90 0.00 0.10
#> ACTGTGGATCTAGG-1     2  0.1211    0.82789 0.00 0.96 0.00 0.04
#> ACTTCTGACATGCA-1     1  0.3335    0.77091 0.86 0.00 0.12 0.02
#> ACTTGACTCCACAA-1     2  0.0000    0.83658 0.00 1.00 0.00 0.00
#> AGAAACGAAAGTAG-1     1  0.1211    0.78471 0.96 0.00 0.00 0.04
#> AGAACAGACGACTA-1     1  0.3400    0.75496 0.82 0.00 0.18 0.00
#> AGACGTACCCCTAC-1     1  0.6797    0.51218 0.60 0.00 0.24 0.16
#> AGACTTCTCATGCA-1     1  0.0000    0.77769 1.00 0.00 0.00 0.00
#> AGAGATGACAGTCA-1     1  0.1211    0.78034 0.96 0.00 0.04 0.00
#> AGAGATGATCTCGC-1     2  0.0000    0.83658 0.00 1.00 0.00 0.00
#> AGAGTGCTGTGTTG-1     4  0.9249   -0.03981 0.16 0.12 0.34 0.38
#> AGATATACTGTTCT-1     2  0.0000    0.83658 0.00 1.00 0.00 0.00
#> AGATCGTGTTTGTC-1     3  0.5860    0.19205 0.04 0.00 0.58 0.38
#> AGATCTCTATCACG-1     1  0.1211    0.78398 0.96 0.00 0.04 0.00
#> AGCATCGAAGGGTG-1     4  0.6248    0.14661 0.00 0.10 0.26 0.64
#> AGCCTCTGCAGTTG-1     1  0.3198    0.77798 0.88 0.00 0.08 0.04
#> AGCTTTACTCTCAT-1     2  0.0707    0.83285 0.00 0.98 0.00 0.02
#> AGGATGCTACTAGC-1     1  0.7779   -0.04637 0.46 0.02 0.38 0.14
#> AGGGTGGACAGTCA-1     2  0.5594    0.64873 0.00 0.72 0.10 0.18
#> AGGTCATGAGTGTC-1     1  0.2011    0.77839 0.92 0.00 0.08 0.00
#> AGGTGTTGGTTACG-1     4  0.7305    0.24531 0.04 0.22 0.12 0.62
#> AGTAATACCGAACT-1     1  0.0000    0.77769 1.00 0.00 0.00 0.00
#> AGTACTCTACGTGT-1     1  0.7357    0.16379 0.50 0.00 0.32 0.18
#> ATAAACACAGTGCT-1     2  0.3037    0.79398 0.00 0.88 0.02 0.10
#> ATAAGTACGAATGA-1     1  0.3335    0.76942 0.86 0.00 0.12 0.02
#> ATAATCGAGCTGAT-1     1  0.6299    0.44045 0.60 0.00 0.32 0.08
#> ATACGGACGAGGTG-1     1  0.2335    0.78000 0.92 0.00 0.06 0.02
#> ATACGGACTATGCG-1     1  0.0707    0.77883 0.98 0.00 0.02 0.00
#> ATAGATTGGTGTAC-1     2  0.0707    0.83154 0.00 0.98 0.00 0.02
#> ATCACGGATTTCGT-1     2  0.7004    0.33627 0.00 0.58 0.20 0.22
#> ATCATGCTGAACCT-1     2  0.0707    0.83154 0.00 0.98 0.00 0.02
#> ATCCCGTGCATGCA-1     1  0.0707    0.77804 0.98 0.00 0.02 0.00
#> ATCCCGTGGCTGAT-1     2  0.4088    0.75854 0.00 0.82 0.04 0.14
#> ATCCGCACGCATCA-1     2  0.4939    0.67743 0.00 0.74 0.04 0.22
#> ATCCTAACGACGGA-1     1  0.5594    0.65962 0.72 0.00 0.18 0.10
#> ATCGCAGAGTGTCA-1     3  0.6216    0.12004 0.00 0.12 0.66 0.22
#> ATCGCCTGTGGCAT-1     1  0.0707    0.78143 0.98 0.00 0.02 0.00
#> ATCGCGCTTTTCGT-1     1  0.9935   -0.46848 0.28 0.20 0.28 0.24
#> ATCTCAACAGGAGC-1     4  0.5957   -0.12351 0.04 0.00 0.42 0.54
#> ATGAAGGACCTGTC-1     3  0.7707   -0.13393 0.00 0.24 0.44 0.32
#> ATGAAGGACCTTAT-1     1  0.2921    0.76592 0.86 0.00 0.14 0.00
#> ATGAAGGACTAGTG-1     1  0.0707    0.77804 0.98 0.00 0.02 0.00
#> ATGACGTGACGACT-1     1  0.3247    0.76779 0.88 0.00 0.06 0.06
#> ATGAGAGAAGTAGA-1     4  0.6843   -0.20950 0.10 0.00 0.44 0.46
#> ATGCACGAATGTCG-1     1  0.0000    0.77769 1.00 0.00 0.00 0.00
#> ATGCACGAGAACCT-1     2  0.0000    0.83658 0.00 1.00 0.00 0.00
#> ATGCAGTGTTACCT-1     1  0.4581    0.73026 0.80 0.00 0.12 0.08
#> ATGCGATGGTTACG-1     2  0.4284    0.70154 0.00 0.78 0.02 0.20
#> ATGCTTTGTAGTCG-1     3  0.7602    0.16527 0.38 0.00 0.42 0.20
#> ATGGGTACAACCTG-1     1  0.5151    0.70019 0.76 0.00 0.14 0.10
#> ATTGCTTGTTACTC-1     2  0.2706    0.80788 0.00 0.90 0.02 0.08
#> ATTGGTCTGACTAC-1     2  0.0000    0.83658 0.00 1.00 0.00 0.00
#> ATTGGTCTTGTCTT-1     1  0.0000    0.77769 1.00 0.00 0.00 0.00
#> CAAAGCACCGTAAC-1     2  0.4211    0.75832 0.04 0.84 0.02 0.10
#> CAAGACTGACCTGA-1     1  0.4731    0.70145 0.78 0.00 0.16 0.06
#> CAAGACTGAGTAGA-1     2  0.0000    0.83658 0.00 1.00 0.00 0.00
#> CAAGGTTGTCATTC-1     1  0.5175    0.71630 0.76 0.00 0.12 0.12
#> CAAGTCGAAACAGA-1     2  0.3335    0.78047 0.00 0.86 0.02 0.12
#> CACAGAACCCTTGC-1     2  0.2706    0.80937 0.00 0.90 0.02 0.08
#> CACCGTACTAAGGA-1     1  0.7357    0.16881 0.50 0.00 0.32 0.18
#> CACCTGACGAAAGT-1     2  0.7785   -0.15472 0.00 0.42 0.32 0.26
#> CACGAAACTTCCGC-1     4  0.8110   -0.01317 0.08 0.08 0.36 0.48
#> CACGACCTCGATAC-1     1  0.5784    0.59995 0.70 0.00 0.10 0.20
#> CACGCTACTGTTCT-1     3  0.7028    0.24393 0.28 0.00 0.56 0.16
#> CACTAACTCCTAAG-1     2  0.6836    0.30469 0.00 0.58 0.14 0.28
#> CACTAGGATGATGC-1     1  0.2706    0.78155 0.90 0.00 0.08 0.02
#> CACTATACCCCGTT-1     2  0.0707    0.83215 0.00 0.98 0.00 0.02
#> CACTTAACCGTACA-1     1  0.5955    0.66688 0.72 0.02 0.18 0.08
#> CAGATCGAATGTCG-1     2  0.5151    0.69129 0.00 0.76 0.10 0.14
#> CAGGCCGACTAGCA-1     2  0.7365   -0.04892 0.00 0.44 0.16 0.40
#> CAGGGCACCATACG-1     1  0.0000    0.77769 1.00 0.00 0.00 0.00
#> CAGGTTGAGGATCT-1     2  0.0000    0.83658 0.00 1.00 0.00 0.00
#> CAGTGATGGACGGA-1     1  0.2411    0.78125 0.92 0.00 0.04 0.04
#> CAGTGATGTAAGGA-1     2  0.5151    0.65543 0.00 0.76 0.10 0.14
#> CAGTGATGTACGCA-1     1  0.0707    0.77804 0.98 0.00 0.02 0.00
#> CAGTTACTAAGGTA-1     2  0.0000    0.83658 0.00 1.00 0.00 0.00
#> CATATAGATCAGGT-1     2  0.5256    0.59767 0.00 0.70 0.04 0.26
#> CATCATACGGAGCA-1     1  0.3037    0.77638 0.88 0.00 0.10 0.02
#> CATCGCTGTGGCAT-1     1  0.8071   -0.14755 0.42 0.02 0.18 0.38
#> CATCTCCTATGTGC-1     4  0.7440    0.08253 0.04 0.10 0.28 0.58
#> CATGAGACACGGGA-1     1  0.2011    0.77785 0.92 0.00 0.08 0.00
#> CATTACACACGGAG-1     1  0.0707    0.77883 0.98 0.00 0.02 0.00
#> CATTGTACTCGATG-1     2  0.4939    0.69352 0.00 0.74 0.04 0.22
#> CATTTGTGACGACT-1     2  0.2706    0.80114 0.00 0.90 0.02 0.08
#> CATTTGTGGGATCT-1     2  0.2345    0.80702 0.00 0.90 0.00 0.10
#> CCAAGAACTCCTAT-1     4  0.7699   -0.12062 0.38 0.00 0.22 0.40
#> CCAGAAACCCTGTC-1     1  0.6840    0.49395 0.60 0.00 0.18 0.22
#> CCAGACCTCTGAGT-1     1  0.2830    0.77609 0.90 0.00 0.06 0.04
#> CCAGCTACCAGCTA-1     1  0.5661    0.60754 0.70 0.00 0.22 0.08
#> CCAGGTCTACACCA-1     3  0.7021    0.20222 0.12 0.00 0.48 0.40
#> CCAGTCACACTGTG-1     4  0.9162   -0.07866 0.18 0.10 0.32 0.40
#> CCATCCGAAGGTTC-1     1  0.7493    0.05896 0.48 0.00 0.32 0.20
#> CCCAACACCTCGCT-1     2  0.1637    0.82391 0.00 0.94 0.00 0.06
#> CCCAGACTGGTTTG-1     2  0.0000    0.83658 0.00 1.00 0.00 0.00
#> CCCAGTTGTCTATC-1     1  0.6320    0.58579 0.66 0.00 0.16 0.18
#> CCCTCAGACACTTT-1     2  0.5077    0.66122 0.00 0.76 0.08 0.16
#> CCCTGAACTAAAGG-1     1  0.4731    0.72918 0.78 0.00 0.16 0.06
#> CCCTGATGCAAGCT-1     2  0.7684   -0.16069 0.00 0.42 0.36 0.22
#> CCGCTATGGGACGA-1     1  0.7744    0.05368 0.48 0.02 0.14 0.36
#> CCGTACACAGCGTT-1     2  0.0000    0.83658 0.00 1.00 0.00 0.00
#> CCTACCGAGGGATG-1     2  0.1913    0.81860 0.00 0.94 0.02 0.04
#> CCTAGAGAGGTGAG-1     1  0.4227    0.75850 0.82 0.00 0.06 0.12
#> CCTGACTGTGTCTT-1     1  0.8418   -0.23481 0.38 0.02 0.32 0.28
#> CCTTAATGCCCAAA-1     4  0.8071   -0.17690 0.18 0.02 0.38 0.42
#> CCTTCACTCAGTCA-1     2  0.1211    0.83027 0.00 0.96 0.00 0.04
#> CGAAGGGATCCGAA-1     2  0.1211    0.82909 0.00 0.96 0.00 0.04
#> CGAAGTACCAACTG-1     1  0.6477    0.38648 0.60 0.00 0.30 0.10
#> CGACAAACCGACAT-1     2  0.4491    0.73614 0.00 0.80 0.06 0.14
#> CGAGGAGACCTCCA-1     4  0.7414   -0.15158 0.18 0.00 0.34 0.48
#> CGAGGGCTACGACT-1     1  0.0707    0.77883 0.98 0.00 0.02 0.00
#> CGATACGATTCACT-1     3  0.6159    0.15972 0.04 0.02 0.64 0.30
#> CGATCCACTTCCAT-1     1  0.0000    0.77769 1.00 0.00 0.00 0.00
#> CGCACGGAGGACGA-1     3  0.5256    0.27429 0.26 0.00 0.70 0.04
#> CGCACTACTCGCCT-1     1  0.3247    0.76345 0.88 0.00 0.06 0.06
#> CGCCATTGGAGCAG-1     2  0.3335    0.78778 0.00 0.86 0.02 0.12
#> CGCCATTGTACTGG-1     4  0.7785    0.17862 0.00 0.32 0.26 0.42
#> CGCGAGACAGGTCT-1     2  0.0707    0.83215 0.00 0.98 0.00 0.02
#> CGCGATCTTTCTTG-1     2  0.7775   -0.25802 0.00 0.38 0.24 0.38
#> CGGACTCTAAACAG-1     1  0.5820    0.61824 0.68 0.00 0.24 0.08
#> CTAAACCTGTGCAT-1     2  0.0707    0.83154 0.00 0.98 0.00 0.02
#> CTAAGGTGCCTAAG-1     1  0.2335    0.78176 0.92 0.00 0.06 0.02
#> CTACTATGTAAAGG-1     1  0.0707    0.77883 0.98 0.00 0.02 0.00
#> CTAGGATGAGCCTA-1     2  0.0000    0.83658 0.00 1.00 0.00 0.00
#> CTAGGATGATCGTG-1     2  0.0000    0.83658 0.00 1.00 0.00 0.00
#> CTATAAGATCGTTT-1     2  0.6921    0.35640 0.00 0.58 0.16 0.26
#> CTATGTACTGTTTC-1     2  0.0000    0.83658 0.00 1.00 0.00 0.00
#> CTGAAGACGTGCAT-1     2  0.2830    0.80294 0.00 0.90 0.04 0.06
#> CTGAAGTGCAGCTA-1     3  0.7028    0.25121 0.16 0.00 0.56 0.28
#> CTGGATGATGTGAC-1     1  0.0000    0.77769 1.00 0.00 0.00 0.00
#> CTTAACACTATCGG-1     3  0.6320    0.27107 0.18 0.00 0.66 0.16
#> CTTAAGCTCCGCTT-1     2  0.0000    0.83658 0.00 1.00 0.00 0.00
#> CTTCATGAAGCATC-1     1  0.6513    0.51761 0.64 0.00 0.18 0.18
#> CTTGTATGACACCA-1     4  0.6808    0.05379 0.00 0.12 0.32 0.56
#> CTTGTATGCGCAAT-1     1  0.0000    0.77769 1.00 0.00 0.00 0.00
#> GAAAGCCTACGTTG-1     3  0.7056    0.17540 0.06 0.04 0.58 0.32
#> GAAATACTCTTAGG-1     1  0.7135    0.41795 0.56 0.00 0.24 0.20
#> GAAGTCACCCTGTC-1     3  0.5661    0.28015 0.22 0.00 0.70 0.08
#> GAAGTCTGTCGCAA-1     3  0.5986    0.23332 0.06 0.00 0.62 0.32
#> GAATTAACTGAAGA-1     2  0.0000    0.83658 0.00 1.00 0.00 0.00
#> GACAGGGAAGAGTA-1     3  0.7135    0.24387 0.24 0.00 0.56 0.20
#> GACAGTTGAGTAGA-1     2  0.0000    0.83658 0.00 1.00 0.00 0.00
#> GACCCTACTAAAGG-1     3  0.5883    0.24442 0.06 0.00 0.64 0.30
#> GACGATTGCCAATG-1     1  0.1913    0.77941 0.94 0.00 0.04 0.02
#> GACGTCCTGATAAG-1     2  0.7084    0.19425 0.00 0.52 0.14 0.34
#> GACTACGATGGTCA-1     1  0.3935    0.76089 0.84 0.00 0.10 0.06
#> GACTTTACGACAGG-1     4  0.8962    0.12321 0.24 0.16 0.12 0.48
#> GAGAAATGTTCTCA-1     4  0.9081    0.21587 0.16 0.36 0.10 0.38
#> GAGCGGCTGGGAGT-1     1  0.5657    0.65454 0.72 0.00 0.16 0.12
#> GAGGATCTGAAAGT-1     1  0.3335    0.76903 0.86 0.00 0.12 0.02
#> GAGTCTGATTTGGG-1     1  0.3525    0.76758 0.86 0.00 0.10 0.04
#> GAGTGACTCTTGCC-1     3  0.8680   -0.14528 0.06 0.32 0.44 0.18
#> GAGTGACTGACTAC-1     1  0.2011    0.78095 0.92 0.00 0.08 0.00
#> GAGTGGGAGTCTTT-1     1  0.7707   -0.09637 0.44 0.00 0.24 0.32
#> GAGTGGGATGCTGA-1     1  0.2830    0.77955 0.90 0.00 0.06 0.04
#> GATCGATGACTAGC-1     4  0.8080    0.23904 0.02 0.28 0.22 0.48
#> GATCGATGGTAAAG-1     1  0.2830    0.77756 0.90 0.00 0.06 0.04
#> GATCTACTTTGCAG-1     3  0.5592    0.20605 0.02 0.02 0.68 0.28
#> GATTCTTGCGAGTT-1     1  0.7738   -0.10336 0.44 0.00 0.26 0.30
#> GATTGGACCCGTTC-1     2  0.0000    0.83658 0.00 1.00 0.00 0.00
#> GATTGGACGGTGTT-1     1  0.5594    0.66739 0.72 0.00 0.18 0.10
#> GATTGGACTTTCGT-1     1  0.5428    0.68469 0.74 0.00 0.12 0.14
#> GATTTAGACTAAGC-1     2  0.0000    0.83658 0.00 1.00 0.00 0.00
#> GCACTAGAAGATGA-1     1  0.7805   -0.10765 0.42 0.00 0.30 0.28
#> GCACTAGACGTAAC-1     1  0.0000    0.77769 1.00 0.00 0.00 0.00
#> GCCTAGCTACGGAG-1     1  0.1913    0.78204 0.94 0.00 0.04 0.02
#> GCGAGCACTGTCGA-1     1  0.0000    0.77769 1.00 0.00 0.00 0.00
#> GCGCGAACGTTCTT-1     4  0.5619    0.00257 0.04 0.00 0.32 0.64
#> GCGGCAACGGAGGT-1     1  0.1913    0.78551 0.94 0.00 0.04 0.02
#> GCTACAGAATCTTC-1     1  0.1637    0.77964 0.94 0.00 0.06 0.00
#> GCTAGAACAGAGGC-1     3  0.7427    0.19553 0.30 0.00 0.50 0.20
#> GGAACTTGGGTAGG-1     1  0.0000    0.77769 1.00 0.00 0.00 0.00
#> GGAATCTGCTTAGG-1     1  0.1637    0.78158 0.94 0.00 0.06 0.00
#> GGACAGGAGTGCTA-1     2  0.6976    0.32603 0.00 0.58 0.18 0.24
#> GGAGCAGATTCAGG-1     1  0.5818    0.65377 0.74 0.02 0.10 0.14
#> GGAGCCACCTTCTA-1     2  0.0000    0.83658 0.00 1.00 0.00 0.00
#> GGATGTACCAAAGA-1     1  0.7357    0.03127 0.50 0.00 0.32 0.18
#> GGCAATACGCTAAC-1     1  0.4491    0.74492 0.80 0.00 0.14 0.06
#> GGCAATACGTTTCT-1     2  0.5489    0.60366 0.00 0.70 0.06 0.24
#> GGGAACGACACAAC-1     1  0.2011    0.78424 0.92 0.00 0.08 0.00
#> GGGACCTGTGGAGG-1     1  0.5486    0.67564 0.72 0.00 0.20 0.08
#> GGGATGGACGACAT-1     1  0.6201    0.43206 0.62 0.00 0.08 0.30
#> GGGCCAACGCGTTA-1     2  0.2345    0.81184 0.00 0.90 0.00 0.10
#> GGGCCAACTCCAAG-1     3  0.8428   -0.14731 0.02 0.30 0.38 0.30
#> GGGTAACTCTAGTG-1     4  0.7832   -0.17126 0.36 0.00 0.26 0.38
#> GGTACATGAAAGCA-1     3  0.7952    0.19739 0.16 0.02 0.42 0.40
#> GGTATCGATGAACC-1     1  0.0707    0.78013 0.98 0.00 0.00 0.02
#> GGTGATACCGACTA-1     3  0.7583    0.23236 0.24 0.00 0.48 0.28
#> GTAACGTGATCGGT-1     3  0.5592    0.20814 0.02 0.02 0.68 0.28
#> GTAACGTGCAGCTA-1     3  0.9224   -0.00361 0.12 0.16 0.40 0.32
#> GTAACGTGGTTGAC-1     4  0.7430    0.08864 0.02 0.42 0.10 0.46
#> GTAAGCACTCATTC-1     1  0.4292    0.75600 0.82 0.00 0.10 0.08
#> GTAGCAACCATTTC-1     3  0.9311    0.03079 0.18 0.12 0.40 0.30
#> GTAGCATGCACTCC-1     1  0.3247    0.77372 0.88 0.00 0.06 0.06
#> GTCATACTAATCGC-1     3  0.8177    0.10893 0.08 0.10 0.52 0.30
#> GTCGCACTTGAGAA-1     2  0.0000    0.83658 0.00 1.00 0.00 0.00
#> GTGATGACCTGAGT-1     1  0.0707    0.77925 0.98 0.00 0.02 0.00
#> GTGATTCTTAGCGT-1     1  0.2706    0.77641 0.90 0.00 0.08 0.02
#> GTGTATCTAGCCTA-1     1  0.2345    0.77961 0.90 0.00 0.10 0.00
#> GTGTATCTGTTACG-1     2  0.4491    0.73026 0.00 0.80 0.06 0.14
#> GTTAAATGTCGACA-1     2  0.1211    0.82780 0.00 0.96 0.00 0.04
#> GTTAGGTGGAACTC-1     1  0.4731    0.72727 0.78 0.00 0.16 0.06
#> TAAACAACGAATCC-1     2  0.3037    0.79897 0.00 0.88 0.02 0.10
#> TAACAATGTGCCCT-1     1  0.8044    0.29524 0.50 0.04 0.32 0.14
#> TAACATGACACTAG-1     2  0.0707    0.83154 0.00 0.98 0.00 0.02
#> TAACTCACGTACAC-1     3  0.7040    0.16548 0.12 0.00 0.46 0.42
#> TAAGAGGACTAAGC-1     2  0.6594    0.44980 0.00 0.62 0.14 0.24
#> TAAGTAACCGAGAG-1     1  0.0707    0.77804 0.98 0.00 0.02 0.00
#> TAAGTAACCTCCAC-1     1  0.1211    0.78084 0.96 0.00 0.00 0.04
#> TACATCACGCTAAC-1     3  0.6042    0.23373 0.04 0.02 0.66 0.28
#> TACGCCACTCCGAA-1     4  0.7432    0.25338 0.08 0.34 0.04 0.54
#> TACGGAACGCGTTA-1     1  0.4491    0.72575 0.80 0.00 0.14 0.06
#> TACGTACTCCCGTT-1     3  0.5713    0.21853 0.04 0.00 0.62 0.34
#> TACTAAGAAAGGTA-1     1  0.0707    0.77804 0.98 0.00 0.02 0.00
#> TACTACACTTACCT-1     1  0.0707    0.77988 0.98 0.00 0.02 0.00
#> TACTCAACTGCTAG-1     2  0.6425    0.29105 0.04 0.58 0.02 0.36
#> TACTCTGATTGACG-1     4  0.6831    0.00987 0.00 0.10 0.42 0.48
#> TACTGTTGCTGAAC-1     2  0.0000    0.83658 0.00 1.00 0.00 0.00
#> TACTTGACTGGTGT-1     1  0.0000    0.77769 1.00 0.00 0.00 0.00
#> TAGAGCACCTTACT-1     1  0.0707    0.77988 0.98 0.00 0.02 0.00
#> TAGATTGACTTGTT-1     1  0.0707    0.77925 0.98 0.00 0.02 0.00
#> TAGCTACTGAATAG-1     1  0.4894    0.73557 0.78 0.00 0.12 0.10
#> TAGGAGCTAAGGCG-1     3  0.7877    0.18147 0.36 0.00 0.36 0.28
#> TAGGAGCTTGCATG-1     1  0.4841    0.72063 0.78 0.00 0.14 0.08
#> TAGGCAACCGTCTC-1     3  0.7274    0.23110 0.22 0.00 0.54 0.24
#> TAGGTCGAGGATCT-1     1  0.1637    0.78003 0.94 0.00 0.06 0.00
#> TAGGTGACACGTTG-1     3  0.6299    0.22748 0.08 0.00 0.60 0.32
#> TAGTATGATCTTAC-1     4  0.8462   -0.07040 0.14 0.06 0.36 0.44
#> TATACCACCTGATG-1     3  0.6988    0.18422 0.12 0.00 0.50 0.38
#> TATGGGTGCTAGCA-1     2  0.1637    0.82622 0.00 0.94 0.00 0.06
#> TATGTCACGGAACG-1     2  0.0000    0.83658 0.00 1.00 0.00 0.00
#> TATGTCACTTCTCA-1     4  0.5986    0.02769 0.00 0.06 0.32 0.62
#> TATTGCTGCCGTTC-1     1  0.0000    0.77769 1.00 0.00 0.00 0.00
#> TCACGAGAGGAGGT-1     2  0.6262    0.26038 0.00 0.54 0.06 0.40
#> TCACTATGGTTGTG-1     1  0.0000    0.77769 1.00 0.00 0.00 0.00
#> TCAGCGCTGGATCT-1     1  0.2335    0.78074 0.92 0.00 0.06 0.02
#> TCCACTCTTACTTC-1     3  0.7427    0.20748 0.30 0.00 0.50 0.20
#> TCCATAACCGTAGT-1     2  0.1211    0.82887 0.00 0.96 0.00 0.04
#> TCCCTACTCAACTG-1     1  0.6941    0.28299 0.52 0.00 0.36 0.12
#> TCGAGCCTATCAGC-1     1  0.5291    0.66122 0.74 0.00 0.18 0.08
#> TCGATTTGTCGTGA-1     2  0.7274    0.23556 0.00 0.54 0.22 0.24
#> TCGCCATGTGGTCA-1     3  0.5993    0.17651 0.02 0.02 0.60 0.36
#> TCGGACCTATAAGG-1     3  0.8633    0.19646 0.30 0.04 0.42 0.24
#> TCGGTAGATCCCAC-1     4  0.9950    0.08778 0.22 0.24 0.24 0.30
#> TCTAAGCTTTCGCC-1     1  0.1211    0.78205 0.96 0.00 0.04 0.00
#> TCTCAAACCTAAGC-1     1  0.2011    0.77712 0.92 0.00 0.00 0.08
#> TGAAGCTGCATGGT-1     2  0.3247    0.78900 0.00 0.88 0.06 0.06
#> TGACACGACCTTAT-1     1  0.1913    0.78036 0.94 0.00 0.02 0.04
#> TGACTGGAGGACAG-1     4  0.7544    0.23437 0.00 0.34 0.20 0.46
#> TGAGTCGAGTTACG-1     1  0.3198    0.77534 0.88 0.00 0.08 0.04
#> TGATCACTTCTACT-1     1  0.4936    0.59804 0.70 0.00 0.02 0.28
#> TGATCGGAGGAGCA-1     1  0.3935    0.74595 0.84 0.00 0.10 0.06
#> TGATTAGATGACTG-1     1  0.2011    0.77785 0.92 0.00 0.08 0.00
#> TGATTCACTGTCAG-1     4  0.6649    0.10274 0.06 0.06 0.20 0.68
#> TGCCGACTCTCCCA-1     4  0.7768   -0.16439 0.36 0.00 0.24 0.40
#> TGCGAAACAGTCAC-1     2  0.7499   -0.08952 0.00 0.42 0.18 0.40
#> TGCGAAACGTTGCA-1     1  0.5661    0.64734 0.70 0.00 0.22 0.08
#> TGCGATGACTAGTG-1     2  0.0000    0.83658 0.00 1.00 0.00 0.00
#> TGCGATGACTGCTC-1     3  0.4948    0.17412 0.00 0.00 0.56 0.44
#> TGCGATGACTTGCC-1     2  0.7824   -0.10657 0.04 0.44 0.10 0.42
#> TGCGTAGACGGGAA-1     3  0.5956    0.27106 0.10 0.00 0.68 0.22
#> TGGAAAGACTCTCG-1     4  0.6910   -0.03986 0.02 0.06 0.42 0.50
#> TGGATGTGACCTAG-1     1  0.4292    0.73893 0.82 0.00 0.10 0.08
#> TGGATGTGTGAAGA-1     2  0.4292    0.75312 0.00 0.82 0.08 0.10
#> TGGCAATGCTTGTT-1     3  0.9027   -0.11842 0.06 0.26 0.36 0.32
#> TGGGTATGGTACGT-1     1  0.2706    0.77995 0.90 0.00 0.08 0.02
#> TGTAGGTGCGAGAG-1     1  0.0000    0.77769 1.00 0.00 0.00 0.00
#> TGTATGCTCATGGT-1     1  0.7594    0.06077 0.48 0.00 0.26 0.26
#> TGTGATCTCTCTAT-1     4  0.8266    0.22502 0.04 0.34 0.16 0.46
#> TGTGGATGGCCAAT-1     1  0.7684   -0.09712 0.42 0.00 0.36 0.22
#> TTACCATGTTGTGG-1     1  0.1211    0.78201 0.96 0.00 0.04 0.00
#> TTAGGGTGCTGGAT-1     2  0.4284    0.71859 0.00 0.78 0.02 0.20
#> TTAGTCTGAAAGCA-1     2  0.0000    0.83658 0.00 1.00 0.00 0.00
#> TTATCCGACTAGTG-1     1  0.7344    0.16572 0.46 0.00 0.38 0.16
#> TTATGCACGTCACA-1     1  0.6286    0.54893 0.66 0.00 0.20 0.14
#> TTATTCCTGGACAG-1     4  0.6299    0.03917 0.00 0.42 0.06 0.52
#> TTATTCCTGGTACT-1     1  0.6497    0.48395 0.64 0.00 0.16 0.20
#> TTCAGTTGTCTCGC-1     4  0.7372   -0.16757 0.16 0.00 0.42 0.42
#> TTCCAAACCTCCCA-1     2  0.1637    0.82592 0.00 0.94 0.00 0.06
#> TTCTCAGAAGCATC-1     2  0.5151    0.68399 0.00 0.76 0.10 0.14
#> TTGAACCTCCTTGC-1     1  0.7198    0.24191 0.54 0.00 0.18 0.28
#> TTGAATGATCTCAT-1     2  0.4939    0.67636 0.00 0.74 0.04 0.22
#> TTGACACTGATAAG-1     1  0.6723    0.44400 0.60 0.00 0.26 0.14
#> TTGGAGACTATGGC-1     3  0.7007    0.19664 0.10 0.02 0.60 0.28
#> TTGGTACTGAATCC-1     3  0.7004    0.26646 0.20 0.00 0.58 0.22
#> TTGGTACTGGATTC-1     3  0.7179   -0.04110 0.00 0.14 0.48 0.38
#> TTGTACACGTTGTG-1     1  0.7745   -0.06513 0.42 0.00 0.34 0.24
#> TTGTAGCTCTCTTA-1     2  0.8706   -0.29989 0.04 0.36 0.24 0.36
#> TTTAGAGATCCTCG-1     2  0.4292    0.74426 0.00 0.82 0.08 0.10
#> TTTCAGTGTCACGA-1     1  0.6594    0.57276 0.62 0.00 0.24 0.14
#> TTTCAGTGTGCAGT-1     1  0.4227    0.75541 0.82 0.00 0.12 0.06
#> TTTCGAACACCTGA-1     2  0.0000    0.83658 0.00 1.00 0.00 0.00
#> TTTCTACTGAGGCA-1     2  0.0000    0.83658 0.00 1.00 0.00 0.00
#> TTTCTACTTCCTCG-1     1  0.5956    0.57223 0.68 0.00 0.22 0.10
#> TTTGCATGAGAGGC-1     1  0.3853    0.75136 0.82 0.00 0.16 0.02

Heatmaps for the consensus matrix. It visualizes the probability of two samples to be in a same group.

consensus_heatmap(res, k = 2)

plot of chunk tab-node-04-consensus-heatmap-1

consensus_heatmap(res, k = 3)

plot of chunk tab-node-04-consensus-heatmap-2

consensus_heatmap(res, k = 4)

plot of chunk tab-node-04-consensus-heatmap-3

Heatmaps for the membership of samples in all partitions to see how consistent they are:

membership_heatmap(res, k = 2)

plot of chunk tab-node-04-membership-heatmap-1

membership_heatmap(res, k = 3)

plot of chunk tab-node-04-membership-heatmap-2

membership_heatmap(res, k = 4)

plot of chunk tab-node-04-membership-heatmap-3

As soon as the classes for columns are determined, the signatures that are significantly different between subgroups can be looked for. Following are the heatmaps for signatures.

Signature heatmaps where rows are scaled:

get_signatures(res, k = 2)

plot of chunk tab-node-04-get-signatures-1

get_signatures(res, k = 3)

plot of chunk tab-node-04-get-signatures-2

get_signatures(res, k = 4)

plot of chunk tab-node-04-get-signatures-3

Signature heatmaps where rows are not scaled:

get_signatures(res, k = 2, scale_rows = FALSE)

plot of chunk tab-node-04-get-signatures-no-scale-1

get_signatures(res, k = 3, scale_rows = FALSE)

plot of chunk tab-node-04-get-signatures-no-scale-2

get_signatures(res, k = 4, scale_rows = FALSE)

plot of chunk tab-node-04-get-signatures-no-scale-3

Compare the overlap of signatures from different k:

compare_signatures(res)

plot of chunk node-04-signature_compare

get_signature() returns a data frame invisibly. To get the list of signatures, the function call should be assigned to a variable explicitly. In following code, if plot argument is set to FALSE, no heatmap is plotted while only the differential analysis is performed.

# code only for demonstration
tb = get_signature(res, k = ..., plot = FALSE)

An example of the output of tb is:

#>   which_row         fdr    mean_1    mean_2 scaled_mean_1 scaled_mean_2 km
#> 1        38 0.042760348  8.373488  9.131774    -0.5533452     0.5164555  1
#> 2        40 0.018707592  7.106213  8.469186    -0.6173731     0.5762149  1
#> 3        55 0.019134737 10.221463 11.207825    -0.6159697     0.5749050  1
#> 4        59 0.006059896  5.921854  7.869574    -0.6899429     0.6439467  1
#> 5        60 0.018055526  8.928898 10.211722    -0.6204761     0.5791110  1
#> 6        98 0.009384629 15.714769 14.887706     0.6635654    -0.6193277  2
...

The columns in tb are:

  1. which_row: row indices corresponding to the input matrix.
  2. fdr: FDR for the differential test.
  3. mean_x: The mean value in group x.
  4. scaled_mean_x: The mean value in group x after rows are scaled.
  5. km: Row groups if k-means clustering is applied to rows (which is done by automatically selecting number of clusters).

If there are too many signatures, top_signatures = ... can be set to only show the signatures with the highest FDRs:

# code only for demonstration
# e.g. to show the top 500 most significant rows
tb = get_signature(res, k = ..., top_signatures = 500)

If the signatures are defined as these which are uniquely high in current group, diff_method argument can be set to "uniquely_high_in_one_group":

# code only for demonstration
tb = get_signature(res, k = ..., diff_method = "uniquely_high_in_one_group")

UMAP plot which shows how samples are separated.

dimension_reduction(res, k = 2, method = "UMAP")

plot of chunk tab-node-04-dimension-reduction-1

dimension_reduction(res, k = 3, method = "UMAP")

plot of chunk tab-node-04-dimension-reduction-2

dimension_reduction(res, k = 4, method = "UMAP")

plot of chunk tab-node-04-dimension-reduction-3

Following heatmap shows how subgroups are split when increasing k:

collect_classes(res)

plot of chunk node-04-collect-classes

Test correlation between subgroups and known annotations. If the known annotation is numeric, one-way ANOVA test is applied, and if the known annotation is discrete, chi-squared contingency table test is applied.

test_to_known_factors(res)
#>             n_sample Seurat_class(p-value) k
#> ATC:skmeans      332                 0.300 2
#> ATC:skmeans      298                 0.607 3
#> ATC:skmeans      217                 0.315 4

If matrix rows can be associated to genes, consider to use functional_enrichment(res, ...) to perform function enrichment for the signature genes. See this vignette for more detailed explanations.

Session info

sessionInfo()
#> R version 4.1.0 (2021-05-18)
#> Platform: x86_64-pc-linux-gnu (64-bit)
#> Running under: CentOS Linux 7 (Core)
#> 
#> Matrix products: default
#> BLAS/LAPACK: /usr/lib64/libopenblas-r0.3.3.so
#> 
#> locale:
#>  [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C               LC_TIME=en_US.UTF-8       
#>  [4] LC_COLLATE=en_US.UTF-8     LC_MONETARY=en_US.UTF-8    LC_MESSAGES=en_US.UTF-8   
#>  [7] LC_PAPER=en_US.UTF-8       LC_NAME=C                  LC_ADDRESS=C              
#> [10] LC_TELEPHONE=C             LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C       
#> 
#> attached base packages:
#>  [1] grid      parallel  stats4    stats     graphics  grDevices utils     datasets  methods  
#> [10] base     
#> 
#> other attached packages:
#>  [1] genefilter_1.74.0           ComplexHeatmap_2.8.0        markdown_1.1               
#>  [4] knitr_1.33                  SeuratObject_4.0.2          Seurat_4.0.3               
#>  [7] scRNAseq_2.6.1              SingleCellExperiment_1.14.1 SummarizedExperiment_1.22.0
#> [10] Biobase_2.52.0              GenomicRanges_1.44.0        GenomeInfoDb_1.28.1        
#> [13] IRanges_2.26.0              S4Vectors_0.30.0            BiocGenerics_0.38.0        
#> [16] MatrixGenerics_1.4.0        matrixStats_0.59.0          cola_1.9.4                 
#> 
#> loaded via a namespace (and not attached):
#>   [1] utf8_1.2.1                    reticulate_1.20               tidyselect_1.1.1             
#>   [4] RSQLite_2.2.7                 AnnotationDbi_1.54.1          htmlwidgets_1.5.3            
#>   [7] BiocParallel_1.26.1           Rtsne_0.15                    munsell_0.5.0                
#>  [10] codetools_0.2-18              ica_1.0-2                     umap_0.2.7.0                 
#>  [13] future_1.21.0                 miniUI_0.1.1.1                colorspace_2.0-2             
#>  [16] filelock_1.0.2                highr_0.9                     rstudioapi_0.13              
#>  [19] ROCR_1.0-11                   tensor_1.5                    listenv_0.8.0                
#>  [22] slam_0.1-48                   GenomeInfoDbData_1.2.6        polyclip_1.10-0              
#>  [25] bit64_4.0.5                   parallelly_1.27.0             vctrs_0.3.8                  
#>  [28] generics_0.1.0                xfun_0.24                     BiocFileCache_2.0.0          
#>  [31] R6_2.5.0                      doParallel_1.0.16             clue_0.3-59                  
#>  [34] AnnotationFilter_1.16.0       bitops_1.0-7                  spatstat.utils_2.2-0         
#>  [37] cachem_1.0.5                  DelayedArray_0.18.0           assertthat_0.2.1             
#>  [40] promises_1.2.0.1              BiocIO_1.2.0                  scales_1.1.1                 
#>  [43] gtable_0.3.0                  Cairo_1.5-12.2                globals_0.14.0               
#>  [46] goftest_1.2-2                 ensembldb_2.16.3              rlang_0.4.11                 
#>  [49] scatterplot3d_0.3-41          eulerr_6.1.0                  GlobalOptions_0.1.2          
#>  [52] splines_4.1.0                 rtracklayer_1.52.0            lazyeval_0.2.2               
#>  [55] impute_1.66.0                 spatstat.geom_2.2-2           brew_1.0-6                   
#>  [58] abind_1.4-5                   BiocManager_1.30.16           yaml_2.2.1                   
#>  [61] reshape2_1.4.4                GenomicFeatures_1.44.0        httpuv_1.6.1                 
#>  [64] tools_4.1.0                   ggplot2_3.3.5                 ellipsis_0.3.2               
#>  [67] spatstat.core_2.3-0           RColorBrewer_1.1-2            skmeans_0.2-13               
#>  [70] ggridges_0.5.3                Rcpp_1.0.7                    plyr_1.8.6                   
#>  [73] progress_1.2.2                zlibbioc_1.38.0               purrr_0.3.4                  
#>  [76] RCurl_1.98-1.3                prettyunits_1.1.1             openssl_1.4.4                
#>  [79] rpart_4.1-15                  deldir_0.2-10                 viridis_0.6.1                
#>  [82] pbapply_1.4-3                 GetoptLong_1.0.5              cowplot_1.1.1                
#>  [85] zoo_1.8-9                     ggrepel_0.9.1                 cluster_2.1.2                
#>  [88] magrittr_2.0.1                RSpectra_0.16-0               data.table_1.14.0            
#>  [91] scattermore_0.7               circlize_0.4.13               lmtest_0.9-38                
#>  [94] RANN_2.6.1                    ProtGenerics_1.24.0           fitdistrplus_1.1-5           
#>  [97] evaluate_0.14                 hms_1.1.0                     patchwork_1.1.1              
#> [100] mime_0.11                     xtable_1.8-4                  XML_3.99-0.6                 
#> [103] mclust_5.4.7                  gridExtra_2.3                 shape_1.4.6                  
#> [106] compiler_4.1.0                biomaRt_2.48.2                tibble_3.1.2                 
#> [109] KernSmooth_2.23-20            crayon_1.4.1                  htmltools_0.5.1.1            
#> [112] mgcv_1.8-36                   later_1.2.0                   tidyr_1.1.3                  
#> [115] DBI_1.1.1                     ExperimentHub_2.0.0           dbplyr_2.1.1                 
#> [118] MASS_7.3-54                   rappdirs_0.3.3                data.tree_1.0.0              
#> [121] Matrix_1.3-4                  igraph_1.2.6                  pkgconfig_2.0.3              
#> [124] GenomicAlignments_1.28.0      spatstat.sparse_2.0-0         plotly_4.9.4.1               
#> [127] microbenchmark_1.4-7          xml2_1.3.2                    foreach_1.5.1                
#> [130] annotate_1.70.0               XVector_0.32.0                stringr_1.4.0                
#> [133] digest_0.6.27                 sctransform_0.3.2             RcppAnnoy_0.0.18             
#> [136] spatstat.data_2.1-0           Biostrings_2.60.1             polylabelr_0.2.0             
#> [139] leiden_0.3.8                  dendextend_1.15.1             uwot_0.1.10                  
#> [142] restfulr_0.0.13               curl_4.3.2                    shiny_1.6.0                  
#> [145] Rsamtools_2.8.0               rjson_0.2.20                  nlme_3.1-152                 
#> [148] lifecycle_1.0.0               jsonlite_1.7.2                askpass_1.1                  
#> [151] viridisLite_0.4.0             fansi_0.5.0                   pillar_1.6.1                 
#> [154] lattice_0.20-44               KEGGREST_1.32.0               fastmap_1.1.0                
#> [157] httr_1.4.2                    survival_3.2-11               interactiveDisplayBase_1.30.0
#> [160] glue_1.4.2                    Polychrome_1.3.1              png_0.1-7                    
#> [163] iterators_1.0.13              BiocVersion_3.13.1            bit_4.0.4                    
#> [166] stringi_1.7.3                 blob_1.2.1                    AnnotationHub_3.0.1          
#> [169] memoise_2.0.0                 dplyr_1.0.7                   irlba_2.3.3                  
#> [172] future.apply_1.7.0