Date: 2021-07-26 11:29:16 CEST, cola version: 1.9.4
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First the variable is renamed to res_rh.
res_rh = rh
The partition hierarchy and all available functions which can be applied to res_rh object.
res_rh
#> A 'HierarchicalPartition' object with 'ATC:skmeans' method.
#> On a matrix with 22269 rows and 1920 columns.
#> Performed in total 8700 partitions.
#> There are 36 groups under the following parameters:
#> - min_samples: 19
#> - mean_silhouette_cutoff: 0.9
#> - min_n_signatures: 624 (signatures are selected based on:)
#> - fdr_cutoff: 0.05
#> - group_diff (scaled values): 0.5
#>
#> Hierarchy of the partition:
#> 0, 1920 cols
#> |-- 01, 598 cols, 12685 signatures
#> | |-- 011, 154 cols, 1938 signatures
#> | | |-- 0111, 82 cols, 1497 signatures
#> | | | |-- 01111, 29 cols (b)
#> | | | |-- 01112, 35 cols (b)
#> | | | `-- 01113, 18 cols (b)
#> | | `-- 0112, 72 cols, 871 signatures
#> | | |-- 01121, 44 cols (a)
#> | | `-- 01122, 28 cols (b)
#> | |-- 012, 248 cols, 1324 signatures
#> | | |-- 0121, 124 cols, 1199 signatures
#> | | | |-- 01211, 41 cols (a)
#> | | | |-- 01212, 47 cols (a)
#> | | | `-- 01213, 36 cols (b)
#> | | `-- 0122, 124 cols, 1413 signatures
#> | | |-- 01221, 49 cols (a)
#> | | |-- 01222, 41 cols, 125 signatures (c)
#> | | `-- 01223, 34 cols (b)
#> | |-- 013, 115 cols, 2134 signatures
#> | | |-- 0131, 68 cols, 904 signatures
#> | | | |-- 01311, 33 cols (b)
#> | | | `-- 01312, 35 cols (b)
#> | | `-- 0132, 47 cols, 177 signatures (c)
#> | `-- 014, 81 cols, 848 signatures
#> | |-- 0141, 45 cols, 14 signatures (c)
#> | `-- 0142, 36 cols (b)
#> |-- 02, 584 cols, 5481 signatures
#> | |-- 021, 197 cols, 2897 signatures
#> | | |-- 0211, 102 cols, 1314 signatures
#> | | | |-- 02111, 43 cols, 337 signatures (c)
#> | | | `-- 02112, 59 cols, 29 signatures (c)
#> | | |-- 0212, 53 cols, 999 signatures
#> | | | |-- 02121, 30 cols (b)
#> | | | `-- 02122, 23 cols (b)
#> | | `-- 0213, 42 cols, 123 signatures (c)
#> | |-- 022, 258 cols, 63 signatures (c)
#> | `-- 023, 129 cols, 541 signatures (c)
#> |-- 03, 373 cols, 2046 signatures
#> | |-- 031, 159 cols, 741 signatures
#> | | |-- 0311, 82 cols, 111 signatures (c)
#> | | `-- 0312, 77 cols, 165 signatures (c)
#> | |-- 032, 124 cols, 767 signatures
#> | | |-- 0321, 68 cols, 108 signatures (c)
#> | | `-- 0322, 56 cols, 76 signatures (c)
#> | `-- 033, 90 cols, 710 signatures
#> | |-- 0331, 44 cols, 11 signatures (c)
#> | `-- 0332, 46 cols, 116 signatures (c)
#> `-- 04, 365 cols, 3418 signatures
#> |-- 041, 147 cols, 3285 signatures
#> | |-- 0411, 45 cols, 567 signatures (c)
#> | |-- 0412, 55 cols, 175 signatures (c)
#> | `-- 0413, 47 cols, 92 signatures (c)
#> |-- 042, 141 cols, 630 signatures
#> | |-- 0421, 52 cols, 42 signatures (c)
#> | |-- 0422, 46 cols (a)
#> | `-- 0423, 43 cols, 18 signatures (c)
#> `-- 043, 77 cols, 593 signatures (c)
#> Stop reason:
#> a) Mean silhouette score was too small
#> b) Subgroup had too few columns.
#> c) There were too few signatures.
#>
#> Following methods can be applied to this 'HierarchicalPartition' object:
#> [1] "all_leaves" "all_nodes" "cola_report" "collect_classes"
#> [5] "colnames" "compare_signatures" "dimension_reduction" "functional_enrichment"
#> [9] "get_anno_col" "get_anno" "get_children_nodes" "get_classes"
#> [13] "get_matrix" "get_signatures" "is_leaf_node" "max_depth"
#> [17] "merge_node" "ncol" "node_info" "node_level"
#> [21] "nrow" "rownames" "show" "split_node"
#> [25] "suggest_best_k" "test_to_known_factors" "top_rows_heatmap" "top_rows_overlap"
#>
#> You can get result for a single node by e.g. object["01"]
The call of hierarchical_partition() was:
#> hierarchical_partition(data = lt$mat, subset = 500, cores = 4)
Dimension of the input matrix:
mat = get_matrix(res_rh)
dim(mat)
#> [1] 22269 1920
All the methods that were tried:
res_rh@param$combination_method
#> [[1]]
#> [1] "ATC" "skmeans"
The density distribution for each sample is visualized as one column in the following heatmap. The clustering is based on the distance which is the Kolmogorov-Smirnov statistic between two distributions.
library(ComplexHeatmap)
densityHeatmap(mat, ylab = "value", cluster_columns = TRUE, show_column_names = FALSE,
mc.cores = 1)
Some values about the hierarchy:
all_nodes(res_rh)
#> [1] "0" "01" "011" "0111" "01111" "01112" "01113" "0112" "01121" "01122" "012" "0121"
#> [13] "01211" "01212" "01213" "0122" "01221" "01222" "01223" "013" "0131" "01311" "01312" "0132"
#> [25] "014" "0141" "0142" "02" "021" "0211" "02111" "02112" "0212" "02121" "02122" "0213"
#> [37] "022" "023" "03" "031" "0311" "0312" "032" "0321" "0322" "033" "0331" "0332"
#> [49] "04" "041" "0411" "0412" "0413" "042" "0421" "0422" "0423" "043"
all_leaves(res_rh)
#> [1] "01111" "01112" "01113" "01121" "01122" "01211" "01212" "01213" "01221" "01222" "01223" "01311"
#> [13] "01312" "0132" "0141" "0142" "02111" "02112" "02121" "02122" "0213" "022" "023" "0311"
#> [25] "0312" "0321" "0322" "0331" "0332" "0411" "0412" "0413" "0421" "0422" "0423" "043"
node_info(res_rh)
#> id best_method depth best_k n_columns n_signatures p_signatures is_leaf
#> 1 0 ATC:skmeans 1 4 1920 12492 0.560959 FALSE
#> 2 01 ATC:skmeans 2 4 598 12685 0.569626 FALSE
#> 3 011 ATC:skmeans 3 2 154 1938 0.087027 FALSE
#> 4 0111 ATC:skmeans 4 3 82 1497 0.067223 FALSE
#> 5 01111 not applied 5 NA 29 NA NA TRUE
#> 6 01112 not applied 5 NA 35 NA NA TRUE
#> 7 01113 not applied 5 NA 18 NA NA TRUE
#> 8 0112 ATC:skmeans 4 2 72 871 0.039113 FALSE
#> 9 01121 ATC:skmeans 5 3 44 NA NA TRUE
#> 10 01122 not applied 5 NA 28 NA NA TRUE
#> 11 012 ATC:skmeans 3 2 248 1324 0.059455 FALSE
#> 12 0121 ATC:skmeans 4 3 124 1199 0.053842 FALSE
#> 13 01211 ATC:skmeans 5 3 41 NA NA TRUE
#> 14 01212 ATC:skmeans 5 3 47 NA NA TRUE
#> 15 01213 not applied 5 NA 36 NA NA TRUE
#> 16 0122 ATC:skmeans 4 3 124 1413 0.063451 FALSE
#> 17 01221 ATC:skmeans 5 2 49 NA NA TRUE
#> 18 01222 ATC:skmeans 5 2 41 125 0.005613 TRUE
#> 19 01223 not applied 5 NA 34 NA NA TRUE
#> 20 013 ATC:skmeans 3 2 115 2134 0.095828 FALSE
#> 21 0131 ATC:skmeans 4 2 68 904 0.040595 FALSE
#> 22 01311 not applied 5 NA 33 NA NA TRUE
#> 23 01312 not applied 5 NA 35 NA NA TRUE
#> 24 0132 ATC:skmeans 4 2 47 177 0.007948 TRUE
#> 25 014 ATC:skmeans 3 2 81 848 0.038080 FALSE
#> 26 0141 ATC:skmeans 4 2 45 14 0.000629 TRUE
#> 27 0142 not applied 4 NA 36 NA NA TRUE
#> 28 02 ATC:skmeans 2 3 584 5481 0.246127 FALSE
#> 29 021 ATC:skmeans 3 3 197 2897 0.130091 FALSE
#> 30 0211 ATC:skmeans 4 2 102 1314 0.059006 FALSE
#> 31 02111 ATC:skmeans 5 3 43 337 0.015133 TRUE
#> 32 02112 ATC:skmeans 5 2 59 29 0.001302 TRUE
#> 33 0212 ATC:skmeans 4 2 53 999 0.044861 FALSE
#> 34 02121 not applied 5 NA 30 NA NA TRUE
#> 35 02122 not applied 5 NA 23 NA NA TRUE
#> 36 0213 ATC:skmeans 4 2 42 123 0.005523 TRUE
#> 37 022 ATC:skmeans 3 2 258 63 0.002829 TRUE
#> 38 023 ATC:skmeans 3 2 129 541 0.024294 TRUE
#> 39 03 ATC:skmeans 2 3 373 2046 0.091877 FALSE
#> 40 031 ATC:skmeans 3 2 159 741 0.033275 FALSE
#> 41 0311 ATC:skmeans 4 2 82 111 0.004985 TRUE
#> 42 0312 ATC:skmeans 4 2 77 165 0.007409 TRUE
#> 43 032 ATC:skmeans 3 2 124 767 0.034442 FALSE
#> 44 0321 ATC:skmeans 4 3 68 108 0.004850 TRUE
#> 45 0322 ATC:skmeans 4 2 56 76 0.003413 TRUE
#> 46 033 ATC:skmeans 3 2 90 710 0.031883 FALSE
#> 47 0331 ATC:skmeans 4 2 44 11 0.000494 TRUE
#> 48 0332 ATC:skmeans 4 2 46 116 0.005209 TRUE
#> 49 04 ATC:skmeans 2 3 365 3418 0.153487 FALSE
#> 50 041 ATC:skmeans 3 3 147 3285 0.147514 FALSE
#> 51 0411 ATC:skmeans 4 2 45 567 0.025461 TRUE
#> 52 0412 ATC:skmeans 4 2 55 175 0.007858 TRUE
#> 53 0413 ATC:skmeans 4 2 47 92 0.004131 TRUE
#> 54 042 ATC:skmeans 3 3 141 630 0.028290 FALSE
#> 55 0421 ATC:skmeans 4 2 52 42 0.001886 TRUE
#> 56 0422 ATC:skmeans 4 2 46 NA NA TRUE
#> 57 0423 ATC:skmeans 4 2 43 18 0.000808 TRUE
#> 58 043 ATC:skmeans 3 2 77 593 0.026629 TRUE
In the output from node_info(), there are the following columns:
id: The node id.best_method: The best method selected.depth: Depth of the node in the hierarchy.best_k: Best number of groups of the partition on that node.n_columns: Number of columns in the submatrix.n_signatures: Number of signatures with the best_k.p_signatures: Proportion of hte signatures in total number of rows in the matrix.is_leaf: Whether the node is a leaf.Labels of nodes are encoded in a special way. The number of digits correspond to the depth of the node in the hierarchy and the value of the digits correspond to the index of the subgroup in the current node, E.g. a label of “012” means the node is the second subgroup of the partition which is the first subgroup of the root node.
Following table shows the best k (number of partitions) for each node in the
partition hierarchy. Clicking on the node name in the table goes to the
corresponding section for the partitioning on that node.
The cola vignette explains the definition of the metrics used for determining the best number of partitions.
suggest_best_k(res_rh)
| Node | Best method | Is leaf | Best k | 1-PAC | Mean silhouette | Concordance | #samples | |
|---|---|---|---|---|---|---|---|---|
| Node0 | ATC:skmeans | 4 | 1.00 | 0.96 | 0.98 | 1920 | ** | |
| Node01 | ATC:skmeans | 4 | 1.00 | 0.99 | 1.00 | 598 | ** | |
| Node011 | ATC:skmeans | 2 | 1.00 | 0.99 | 0.99 | 154 | ** | |
| Node0111 | ATC:skmeans | 3 | 1.00 | 0.97 | 0.99 | 82 | ** | |
| Node01111-leaf | not applied | ✓ (b) | 29 | |||||
| Node01112-leaf | not applied | ✓ (b) | 35 | |||||
| Node01113-leaf | not applied | ✓ (b) | 18 | |||||
| Node0112 | ATC:skmeans | 2 | 1.00 | 0.99 | 0.99 | 72 | ** | |
| Node01121-leaf | ATC:skmeans | ✓ (a) | 3 | 0.78 | 0.84 | 0.93 | 44 | |
| Node01122-leaf | not applied | ✓ (b) | 28 | |||||
| Node012 | ATC:skmeans | 4 | 0.97 | 0.94 | 0.98 | 248 | ** | |
| Node0121 | ATC:skmeans | 3 | 0.98 | 0.96 | 0.98 | 124 | ** | |
| Node01211-leaf | ATC:skmeans | ✓ (a) | 3 | 0.61 | 0.69 | 0.86 | 41 | |
| Node01212-leaf | ATC:skmeans | ✓ (a) | 3 | 0.87 | 0.89 | 0.95 | 47 | |
| Node01213-leaf | not applied | ✓ (b) | 36 | |||||
| Node0122 | ATC:skmeans | 3 | 1.00 | 0.96 | 0.98 | 124 | ** | |
| Node01221-leaf | ATC:skmeans | ✓ (a) | 2 | 0.83 | 0.90 | 0.96 | 49 | |
| Node01222-leaf | ATC:skmeans | ✓ (c) | 2 | 1.00 | 1.00 | 1.00 | 41 | ** |
| Node01223-leaf | not applied | ✓ (b) | 34 | |||||
| Node013 | ATC:skmeans | 2 | 1.00 | 0.97 | 0.99 | 115 | ** | |
| Node0131 | ATC:skmeans | 2 | 1.00 | 0.95 | 0.98 | 68 | ** | |
| Node01311-leaf | not applied | ✓ (b) | 33 | |||||
| Node01312-leaf | not applied | ✓ (b) | 35 | |||||
| Node0132-leaf | ATC:skmeans | ✓ (c) | 2 | 1.00 | 0.99 | 1.00 | 47 | ** |
| Node014 | ATC:skmeans | 3 | 0.90 | 0.94 | 0.97 | 81 | * | |
| Node0141-leaf | ATC:skmeans | ✓ (c) | 3 | 0.94 | 0.93 | 0.97 | 45 | * |
| Node0142-leaf | not applied | ✓ (b) | 36 | |||||
| Node02 | ATC:skmeans | 4 | 0.92 | 0.92 | 0.97 | 584 | * | |
| Node021 | ATC:skmeans | 4 | 0.95 | 0.93 | 0.97 | 197 | * | |
| Node0211 | ATC:skmeans | 3 | 0.92 | 0.93 | 0.97 | 102 | * | |
| Node02111-leaf | ATC:skmeans | ✓ (c) | 3 | 1.00 | 0.98 | 0.99 | 43 | ** |
| Node02112-leaf | ATC:skmeans | ✓ (c) | 2 | 1.00 | 0.98 | 0.99 | 59 | ** |
| Node0212 | ATC:skmeans | 2 | 1.00 | 0.97 | 0.98 | 53 | ** | |
| Node02121-leaf | not applied | ✓ (b) | 30 | |||||
| Node02122-leaf | not applied | ✓ (b) | 23 | |||||
| Node0213-leaf | ATC:skmeans | ✓ (c) | 2 | 1.00 | 1.00 | 1.00 | 42 | ** |
| Node022-leaf | ATC:skmeans | ✓ (c) | 4 | 0.93 | 0.92 | 0.96 | 258 | * |
| Node023-leaf | ATC:skmeans | ✓ (c) | 3 | 0.91 | 0.91 | 0.96 | 129 | * |
| Node03 | ATC:skmeans | 3 | 0.99 | 0.97 | 0.99 | 373 | ** | |
| Node031 | ATC:skmeans | 2 | 0.95 | 0.94 | 0.97 | 159 | * | |
| Node0311-leaf | ATC:skmeans | ✓ (c) | 2 | 0.97 | 0.95 | 0.98 | 82 | ** |
| Node0312-leaf | ATC:skmeans | ✓ (c) | 3 | 0.93 | 0.93 | 0.97 | 77 | * |
| Node032 | ATC:skmeans | 2 | 1.00 | 0.99 | 1.00 | 124 | ** | |
| Node0321-leaf | ATC:skmeans | ✓ (c) | 3 | 0.92 | 0.94 | 0.97 | 68 | * |
| Node0322-leaf | ATC:skmeans | ✓ (c) | 2 | 0.96 | 0.95 | 0.98 | 56 | ** |
| Node033 | ATC:skmeans | 3 | 0.91 | 0.94 | 0.97 | 90 | * | |
| Node0331-leaf | ATC:skmeans | ✓ (c) | 2 | 1.00 | 0.97 | 0.99 | 44 | ** |
| Node0332-leaf | ATC:skmeans | ✓ (c) | 2 | 0.91 | 0.97 | 0.98 | 46 | * |
| Node04 | ATC:skmeans | 3 | 1.00 | 0.97 | 0.99 | 365 | ** | |
| Node041 | ATC:skmeans | 3 | 0.99 | 0.96 | 0.98 | 147 | ** | |
| Node0411-leaf | ATC:skmeans | ✓ (c) | 2 | 0.95 | 0.94 | 0.97 | 45 | ** |
| Node0412-leaf | ATC:skmeans | ✓ (c) | 2 | 1.00 | 0.97 | 0.99 | 55 | ** |
| Node0413-leaf | ATC:skmeans | ✓ (c) | 2 | 1.00 | 1.00 | 1.00 | 47 | ** |
| Node042 | ATC:skmeans | 3 | 1.00 | 0.97 | 0.99 | 141 | ** | |
| Node0421-leaf | ATC:skmeans | ✓ (c) | 2 | 1.00 | 0.97 | 0.99 | 52 | ** |
| Node0422-leaf | ATC:skmeans | ✓ (a) | 2 | 0.42 | 0.74 | 0.89 | 46 | |
| Node0423-leaf | ATC:skmeans | ✓ (c) | 2 | 1.00 | 0.97 | 0.99 | 43 | ** |
| Node043-leaf | ATC:skmeans | ✓ (c) | 2 | 1.00 | 1.00 | 1.00 | 77 | ** |
Stop reason: a) Mean silhouette score was too small b) Subgroup had too few columns. c) There were too few signatures.
**: 1-PAC > 0.95, *: 1-PAC > 0.9
The nodes of the hierarchy can be merged by setting the merge_node parameters. Here we
control the hierarchy with the min_n_signatures parameter. The value of min_n_signatures is
from node_info().
collect_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 630))
collect_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 710))
collect_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 741))
collect_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 767))
collect_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 848))
collect_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 871))
collect_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 904))
collect_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 999))
collect_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 1199))
collect_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 1314))
collect_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 1324))
collect_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 1413))
collect_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 1497))
collect_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 1938))
collect_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 2046))
collect_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 2134))
collect_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 2897))
collect_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 3285))
collect_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 3418))
collect_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 5481))
collect_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 12492))
collect_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 12685))
#> Error in max(children_height): invalid 'type' (list) of argument
Following shows the table of the partitions (You need to click the show/hide code output link to see it).
get_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 630))
#> HSPC_007 HSPC_013 HSPC_019 HSPC_025 HSPC_031 HSPC_037 LT-HSC_001 HSPC_001 HSPC_008
#> "0213" "023" "02112" "0422" "0322" "0422" "023" "01221" "0423"
#> HSPC_014 HSPC_020 HSPC_026 HSPC_032 HSPC_038 LT-HSC_002 HSPC_002 HSPC_009 HSPC_015
#> "022" "0423" "0412" "02111" "022" "0422" "022" "022" "023"
#> HSPC_021 HSPC_027 HSPC_033 HSPC_039 LT-HSC_003 HSPC_003 HSPC_010 HSPC_016 HSPC_022
#> "022" "0332" "0311" "02112" "023" "01213" "0213" "01221" "0412"
#> HSPC_028 HSPC_034 HSPC_040 LT-HSC_004 HSPC_004 HSPC_011 HSPC_017 HSPC_023 HSPC_029
#> "0312" "01213" "0321" "022" "0311" "0421" "022" "0422" "02112"
#> HSPC_035 HSPC_041 LT-HSC_005 HSPC_005 HSPC_012 HSPC_018 HSPC_024 HSPC_030 HSPC_036
#> "022" "0421" "02112" "02112" "0422" "0421" "022" "0311" "01212"
#> HSPC_042 LT-HSC_006 HSPC_006 Prog_007 Prog_013 Prog_019 Prog_025 Prog_031 Prog_037
#> "0322" "022" "0412" "01223" "01212" "01312" "0411" "0331" "0332"
#> LT-HSC_007 Prog_001 Prog_008 Prog_014 Prog_020 Prog_026 Prog_032 Prog_038 LT-HSC_008
#> "0423" "043" "01112" "01121" "0142" "0331" "0141" "0141" "0312"
#> Prog_002 Prog_009 Prog_015 Prog_021 Prog_027 Prog_033 Prog_039 LT-HSC_009 Prog_003
#> "01213" "01112" "01212" "0141" "01222" "01121" "01112" "022" "01222"
#> Prog_010 Prog_016 Prog_022 Prog_028 Prog_034 Prog_040 LT-HSC_010 Prog_004 Prog_011
#> "0412" "0411" "0411" "01122" "02112" "0421" "0412" "0331" "0142"
#> Prog_017 Prog_023 Prog_029 Prog_035 Prog_041 LT-HSC_011 Prog_005 Prog_012 Prog_018
#> "01211" "01222" "0142" "01111" "0213" "0213" "0213" "022" "022"
#> Prog_024 Prog_030 Prog_036 Prog_042 LT-HSC_012 Prog_006 HSPC_049 HSPC_055 HSPC_061
#> "0142" "0411" "0412" "0411" "0411" "01111" "0311" "0422" "0422"
#> HSPC_067 HSPC_073 HSPC_079 LT-HSC_013 HSPC_043 HSPC_050 HSPC_056 HSPC_062 HSPC_068
#> "0421" "022" "0412" "022" "0421" "043" "022" "0413" "022"
#> HSPC_074 HSPC_080 LT-HSC_014 HSPC_044 HSPC_051 HSPC_057 HSPC_063 HSPC_069 HSPC_075
#> "022" "0321" "022" "043" "0322" "022" "0412" "0321" "022"
#> HSPC_081 LT-HSC_015 HSPC_045 HSPC_052 HSPC_058 HSPC_064 HSPC_070 HSPC_076 HSPC_082
#> "0321" "022" "0421" "043" "0311" "0413" "0332" "0321" "0421"
#> LT-HSC_016 HSPC_046 HSPC_053 HSPC_059 HSPC_065 HSPC_071 HSPC_077 HSPC_083 LT-HSC_017
#> "022" "0322" "01212" "02112" "0321" "0413" "01212" "022" "022"
#> HSPC_047 HSPC_054 HSPC_060 HSPC_066 HSPC_072 HSPC_078 HSPC_084 LT-HSC_018 HSPC_048
#> "023" "0312" "0311" "0311" "0413" "043" "0421" "022" "0322"
#> Prog_049 Prog_055 Prog_061 Prog_067 Prog_073 Prog_079 LT-HSC_019 Prog_043 Prog_050
#> "01112" "01211" "01121" "0142" "0321" "01112" "02112" "0132" "01211"
#> Prog_056 Prog_062 Prog_068 Prog_074 Prog_080 LT-HSC_020 Prog_044 Prog_051 Prog_057
#> "01222" "0423" "0321" "0411" "043" "0311" "0321" "0141" "01312"
#> Prog_063 Prog_069 Prog_075 Prog_081 LT-HSC_021 Prog_045 Prog_052 Prog_058 Prog_064
#> "043" "01222" "01211" "01112" "0413" "0132" "043" "0142" "0141"
#> Prog_070 Prog_076 Prog_082 LT-HSC_022 Prog_046 Prog_053 Prog_059 Prog_065 Prog_071
#> "0412" "0141" "01111" "022" "01122" "01121" "01222" "01312" "01223"
#> Prog_077 Prog_083 LT-HSC_023 Prog_047 Prog_054 Prog_060 Prog_066 Prog_072 Prog_078
#> "01222" "01212" "022" "01211" "0411" "0213" "0142" "0331" "0142"
#> Prog_084 LT-HSC_024 Prog_048 HSPC_091 HSPC_097 HSPC_103 HSPC_109 HSPC_115 HSPC_121
#> "01121" "0331" "0321" "02122" "023" "022" "043" "022" "023"
#> LT-HSC_025 HSPC_085 HSPC_092 HSPC_098 HSPC_104 HSPC_110 HSPC_116 HSPC_122 LT-HSC_026
#> "02121" "0421" "02121" "043" "023" "043" "02111" "0311" "022"
#> HSPC_086 HSPC_093 HSPC_099 HSPC_105 HSPC_111 HSPC_117 HSPC_123 LT-HSC_027 HSPC_087
#> "02112" "02112" "0422" "022" "022" "0422" "022" "023" "022"
#> HSPC_094 HSPC_100 HSPC_106 HSPC_112 HSPC_118 HSPC_124 LT-HSC_028 HSPC_088 HSPC_095
#> "01221" "0321" "022" "02111" "0311" "02111" "0321" "0321" "022"
#> HSPC_101 HSPC_107 HSPC_113 HSPC_119 HSPC_125 LT-HSC_029 HSPC_089 HSPC_096 HSPC_102
#> "01213" "0422" "023" "023" "0311" "02122" "0321" "043" "01211"
#> HSPC_108 HSPC_114 HSPC_120 HSPC_126 LT-HSC_030 HSPC_090 Prog_091 Prog_097 Prog_103
#> "0311" "0322" "0312" "0322" "02121" "01221" "01111" "01211" "01221"
#> Prog_109 Prog_115 Prog_121 LT-HSC_031 Prog_085 Prog_092 Prog_098 Prog_104 Prog_110
#> "0412" "0142" "0213" "0321" "01222" "0331" "01121" "02111" "01112"
#> Prog_116 Prog_122 LT-HSC_032 Prog_086 Prog_093 Prog_099 Prog_105 Prog_111 Prog_117
#> "01221" "0331" "01111" "02122" "01223" "01222" "01211" "0142" "0132"
#> Prog_123 LT-HSC_033 Prog_087 Prog_094 Prog_100 Prog_106 Prog_112 Prog_118 Prog_124
#> "01211" "0312" "01211" "0141" "01121" "0311" "01112" "0412" "0332"
#> LT-HSC_034 Prog_088 Prog_095 Prog_101 Prog_107 Prog_113 Prog_119 Prog_125 LT-HSC_035
#> "0312" "043" "01122" "01312" "01112" "01223" "01111" "0311" "02122"
#> Prog_089 Prog_096 Prog_102 Prog_108 Prog_114 Prog_120 Prog_126 LT-HSC_036 Prog_090
#> "0142" "0322" "0311" "0411" "0413" "023" "0141" "0331" "01121"
#> HSPC_133 HSPC_139 HSPC_145 HSPC_151 HSPC_157 HSPC_163 LT-HSC_037 HSPC_127 HSPC_134
#> "022" "022" "023" "0422" "043" "023" "023" "0412" "023"
#> HSPC_140 HSPC_146 HSPC_152 HSPC_158 HSPC_164 LT-HSC_038 HSPC_128 HSPC_135 HSPC_141
#> "023" "0412" "022" "0422" "022" "023" "023" "0312" "022"
#> HSPC_147 HSPC_153 HSPC_159 HSPC_165 LT-HSC_039 HSPC_129 HSPC_136 HSPC_142 HSPC_148
#> "023" "022" "0422" "043" "022" "02111" "0422" "0421" "043"
#> HSPC_154 HSPC_160 HSPC_166 LT-HSC_040 HSPC_130 HSPC_137 HSPC_143 HSPC_149 HSPC_155
#> "043" "02112" "0422" "022" "0422" "02111" "022" "022" "023"
#> HSPC_161 HSPC_167 LT-HSC_041 HSPC_131 HSPC_138 HSPC_144 HSPC_150 HSPC_156 HSPC_162
#> "0422" "023" "022" "022" "01221" "0312" "02111" "01221" "0322"
#> HSPC_168 LT-HSC_042 HSPC_132 Prog_133 Prog_139 Prog_145 Prog_151 Prog_157 Prog_163
#> "0413" "022" "0132" "01211" "01121" "01213" "0321" "01222" "01113"
#> LT-HSC_043 Prog_127 Prog_134 Prog_140 Prog_146 Prog_152 Prog_158 Prog_164 LT-HSC_044
#> "0132" "0321" "043" "01111" "01113" "043" "01112" "0213" "043"
#> Prog_128 Prog_135 Prog_141 Prog_147 Prog_153 Prog_159 Prog_165 LT-HSC_045 Prog_129
#> "01211" "0322" "0132" "02112" "01222" "0412" "043" "0412" "01311"
#> Prog_136 Prog_142 Prog_148 Prog_154 Prog_160 Prog_166 LT-HSC_046 Prog_130 Prog_137
#> "0132" "0332" "023" "0331" "022" "0141" "0312" "01312" "01222"
#> Prog_143 Prog_149 Prog_155 Prog_161 Prog_167 LT-HSC_047 Prog_131 Prog_138 Prog_144
#> "01312" "0413" "01211" "0332" "01212" "0213" "0331" "02111" "043"
#> Prog_150 Prog_156 Prog_162 Prog_168 LT-HSC_048 Prog_132 HSPC_175 HSPC_181 HSPC_187
#> "01312" "02122" "0412" "01312" "023" "01312" "0421" "022" "022"
#> HSPC_193 HSPC_199 HSPC_205 LT-HSC_049 HSPC_169 HSPC_176 HSPC_182 HSPC_188 HSPC_194
#> "0332" "0312" "022" "022" "0423" "022" "023" "02111" "02112"
#> HSPC_200 HSPC_206 LT-HSC_050 HSPC_170 HSPC_177 HSPC_183 HSPC_189 HSPC_195 HSPC_201
#> "022" "01223" "022" "023" "022" "0332" "0311" "01213" "02112"
#> HSPC_207 LT-HSC_051 HSPC_171 HSPC_178 HSPC_184 HSPC_190 HSPC_196 HSPC_202 HSPC_208
#> "0321" "022" "022" "0311" "02121" "0413" "0421" "0322" "022"
#> LT-HSC_052 HSPC_172 HSPC_179 HSPC_185 HSPC_191 HSPC_197 HSPC_203 HSPC_209 LT-HSC_053
#> "01221" "01221" "01221" "023" "022" "02112" "0423" "02112" "02112"
#> HSPC_173 HSPC_180 HSPC_186 HSPC_192 HSPC_198 HSPC_204 HSPC_210 LT-HSC_054 HSPC_174
#> "023" "043" "0331" "022" "0312" "0412" "043" "022" "0311"
#> Prog_175 Prog_181 Prog_187 Prog_193 Prog_199 Prog_205 LT-HSC_055 Prog_169 Prog_176
#> "0411" "02112" "0331" "0422" "0321" "0413" "0132" "02112" "01221"
#> Prog_182 Prog_188 Prog_194 Prog_200 Prog_206 LT-HSC_056 Prog_170 Prog_177 Prog_183
#> "043" "0141" "023" "043" "01222" "01312" "01112" "0423" "0132"
#> Prog_189 Prog_195 Prog_201 Prog_207 LT-HSC_057 Prog_171 Prog_178 Prog_184 Prog_190
#> "01222" "0421" "0412" "0142" "0312" "0421" "01121" "01312" "01211"
#> Prog_196 Prog_202 Prog_208 LT-HSC_058 Prog_172 Prog_179 Prog_185 Prog_191 Prog_197
#> "01111" "0213" "0331" "0322" "0141" "01311" "01111" "0331" "01312"
#> Prog_203 Prog_209 LT-HSC_059 Prog_173 Prog_180 Prog_186 Prog_192 Prog_198 Prog_204
#> "0132" "01311" "02122" "043" "0322" "01223" "01211" "02112" "023"
#> Prog_210 LT-HSC_060 Prog_174 HSPC_217 HSPC_223 HSPC_229 HSPC_235 HSPC_241 HSPC_247
#> "0322" "01311" "0213" "02122" "022" "023" "022" "02112" "023"
#> LT-HSC_061 HSPC_211 HSPC_218 HSPC_224 HSPC_230 HSPC_236 HSPC_242 HSPC_248 LT-HSC_062
#> "02121" "0423" "022" "022" "0422" "043" "023" "022" "023"
#> HSPC_212 HSPC_219 HSPC_225 HSPC_231 HSPC_237 HSPC_243 HSPC_249 LT-HSC_063 HSPC_213
#> "023" "0421" "022" "023" "022" "0412" "022" "0332" "0413"
#> HSPC_220 HSPC_226 HSPC_232 HSPC_238 HSPC_244 HSPC_250 LT-HSC_064 HSPC_214 HSPC_221
#> "022" "02112" "023" "02122" "0322" "0413" "01121" "01213" "0312"
#> HSPC_227 HSPC_233 HSPC_239 HSPC_245 HSPC_251 LT-HSC_065 HSPC_215 HSPC_222 HSPC_228
#> "022" "0421" "022" "022" "0413" "0312" "0412" "0423" "023"
#> HSPC_234 HSPC_240 HSPC_246 HSPC_252 LT-HSC_066 HSPC_216 Prog_217 Prog_223 Prog_229
#> "02112" "0312" "022" "0213" "0312" "01213" "01111" "0421" "01112"
#> Prog_235 Prog_241 Prog_247 LT-HSC_067 Prog_211 Prog_218 Prog_224 Prog_230 Prog_236
#> "023" "022" "0331" "0213" "01121" "01222" "0132" "0413" "01213"
#> Prog_242 Prog_248 LT-HSC_068 Prog_212 Prog_219 Prog_225 Prog_231 Prog_237 Prog_243
#> "0142" "043" "01221" "0141" "0213" "0331" "0132" "0423" "01312"
#> Prog_249 LT-HSC_069 Prog_213 Prog_220 Prog_226 Prog_232 Prog_238 Prog_244 Prog_250
#> "01111" "0322" "043" "0213" "0311" "0332" "01211" "0321" "0141"
#> LT-HSC_070 Prog_214 Prog_221 Prog_227 Prog_233 Prog_239 Prog_245 Prog_251 LT-HSC_071
#> "043" "0413" "01111" "0132" "01222" "01111" "01211" "02122" "0322"
#> Prog_215 Prog_222 Prog_228 Prog_234 Prog_240 Prog_246 Prog_252 LT-HSC_072 Prog_216
#> "01113" "0322" "01311" "01212" "01221" "0332" "0322" "01211" "01113"
#> HSPC_259 HSPC_265 HSPC_271 HSPC_277 HSPC_283 HSPC_289 LT-HSC_073 HSPC_253 HSPC_260
#> "023" "022" "0412" "023" "022" "022" "023" "0413" "02112"
#> HSPC_266 HSPC_272 HSPC_278 HSPC_284 HSPC_290 LT-HSC_074 HSPC_254 HSPC_261 HSPC_267
#> "022" "02112" "0423" "02112" "0413" "022" "022" "0132" "0311"
#> HSPC_273 HSPC_279 HSPC_285 HSPC_291 LT-HSC_075 HSPC_255 HSPC_262 HSPC_268 HSPC_274
#> "02112" "043" "01213" "0332" "0312" "0322" "02121" "01212" "022"
#> HSPC_280 HSPC_286 HSPC_292 LT-HSC_076 HSPC_256 HSPC_263 HSPC_269 HSPC_275 HSPC_281
#> "0412" "0423" "0412" "0421" "01121" "0412" "0132" "01312" "023"
#> HSPC_287 HSPC_293 LT-HSC_077 HSPC_257 HSPC_264 HSPC_270 HSPC_276 HSPC_282 HSPC_288
#> "0413" "0412" "023" "0413" "022" "0321" "0321" "01212" "01212"
#> HSPC_294 LT-HSC_078 HSPC_258 Prog_259 Prog_265 Prog_271 Prog_277 Prog_283 Prog_289
#> "0413" "022" "01222" "0312" "01121" "0332" "0312" "0421" "0412"
#> LT-HSC_079 Prog_253 Prog_260 Prog_266 Prog_272 Prog_278 Prog_284 Prog_290 LT-HSC_080
#> "02112" "0142" "01223" "01221" "01223" "01121" "0142" "01122" "0321"
#> Prog_254 Prog_261 Prog_267 Prog_273 Prog_279 Prog_285 Prog_291 LT-HSC_081 Prog_255
#> "01121" "0141" "01311" "01312" "01112" "0141" "0411" "01221" "01211"
#> Prog_262 Prog_268 Prog_274 Prog_280 Prog_286 Prog_292 LT-HSC_082 Prog_256 Prog_263
#> "01223" "01223" "0141" "0332" "01121" "01222" "0322" "0423" "01311"
#> Prog_269 Prog_275 Prog_281 Prog_287 Prog_293 LT-HSC_083 Prog_257 Prog_264 Prog_270
#> "01122" "01223" "0142" "01312" "0332" "02121" "0213" "023" "01311"
#> Prog_276 Prog_282 Prog_288 Prog_294 LT-HSC_084 Prog_258 HSPC_301 HSPC_307 HSPC_313
#> "01212" "01113" "01122" "01222" "0332" "0132" "023" "022" "0422"
#> HSPC_319 HSPC_325 HSPC_331 LT-HSC_085 HSPC_295 HSPC_302 HSPC_308 HSPC_314 HSPC_320
#> "02122" "022" "022" "022" "0413" "023" "043" "0423" "043"
#> HSPC_326 HSPC_332 LT-HSC_086 HSPC_296 HSPC_303 HSPC_309 HSPC_315 HSPC_321 HSPC_327
#> "022" "01211" "0423" "022" "01221" "022" "022" "0421" "01212"
#> HSPC_333 LT-HSC_087 HSPC_297 HSPC_304 HSPC_310 HSPC_316 HSPC_322 HSPC_328 HSPC_334
#> "01213" "02122" "022" "0322" "022" "023" "0312" "0423" "022"
#> LT-HSC_088 HSPC_298 HSPC_305 HSPC_311 HSPC_317 HSPC_323 HSPC_329 HSPC_335 LT-HSC_089
#> "043" "0322" "0412" "02122" "023" "0311" "0423" "022" "022"
#> HSPC_299 HSPC_306 HSPC_312 HSPC_318 HSPC_324 HSPC_330 HSPC_336 LT-HSC_090 HSPC_300
#> "0332" "0332" "0413" "022" "0312" "0311" "022" "0322" "01221"
#> Prog_301 Prog_307 Prog_313 Prog_319 Prog_325 Prog_331 LT-HSC_091 Prog_295 Prog_302
#> "0411" "0412" "0413" "0132" "01211" "01212" "01111" "0412" "02122"
#> Prog_308 Prog_314 Prog_320 Prog_326 Prog_332 LT-HSC_092 Prog_296 Prog_303 Prog_309
#> "01223" "0331" "01221" "01111" "01222" "02122" "01222" "022" "022"
#> Prog_315 Prog_321 Prog_327 Prog_333 LT-HSC_093 Prog_297 Prog_304 Prog_310 Prog_316
#> "0411" "0411" "01211" "043" "0423" "043" "01211" "0412" "0411"
#> Prog_322 Prog_328 Prog_334 LT-HSC_094 Prog_298 Prog_305 Prog_311 Prog_317 Prog_323
#> "043" "0411" "0142" "0423" "0142" "0413" "043" "02122" "0411"
#> Prog_329 Prog_335 LT-HSC_095 Prog_299 Prog_306 Prog_312 Prog_318 Prog_324 Prog_330
#> "0411" "0413" "01112" "01121" "022" "01111" "01111" "01122" "0132"
#> Prog_336 LT-HSC_096 Prog_300 HSPC_343 HSPC_349 HSPC_355 HSPC_361 HSPC_367 HSPC_373
#> "0132" "01212" "01311" "0132" "0311" "0213" "023" "022" "023"
#> LT-HSC_097 HSPC_337 HSPC_344 HSPC_350 HSPC_356 HSPC_362 HSPC_368 HSPC_374 LT-HSC_098
#> "02121" "022" "0412" "022" "043" "0411" "0421" "0321" "01122"
#> HSPC_338 HSPC_345 HSPC_351 HSPC_357 HSPC_363 HSPC_369 HSPC_375 LT-HSC_099 HSPC_339
#> "01112" "043" "043" "02111" "022" "02111" "02111" "023" "0321"
#> HSPC_346 HSPC_352 HSPC_358 HSPC_364 HSPC_370 HSPC_376 LT-HSC_100 HSPC_340 HSPC_347
#> "01213" "0412" "0421" "0422" "01312" "0421" "01112" "0213" "02112"
#> HSPC_353 HSPC_359 HSPC_365 HSPC_371 HSPC_377 LT-HSC_101 HSPC_341 HSPC_348 HSPC_354
#> "01212" "0321" "023" "01212" "0413" "0411" "01221" "0331" "022"
#> HSPC_360 HSPC_366 HSPC_372 HSPC_378 LT-HSC_102 HSPC_342 Prog_343 Prog_349 Prog_355
#> "0422" "0213" "0421" "02121" "01112" "01311" "0132" "0411" "0413"
#> Prog_361 Prog_367 Prog_373 LT-HSC_103 Prog_337 Prog_344 Prog_350 Prog_356 Prog_362
#> "0141" "01312" "01113" "0132" "01111" "02112" "0141" "01121" "0412"
#> Prog_368 Prog_374 LT-HSC_104 Prog_338 Prog_345 Prog_351 Prog_357 Prog_363 Prog_369
#> "0142" "0141" "02122" "01221" "0411" "0142" "01112" "0141" "0411"
#> Prog_375 LT-HSC_105 Prog_339 Prog_346 Prog_352 Prog_358 Prog_364 Prog_370 Prog_376
#> "01112" "0411" "01122" "0141" "01112" "0311" "01122" "0411" "01121"
#> LT-HSC_106 Prog_340 Prog_347 Prog_353 Prog_359 Prog_365 Prog_371 Prog_377 LT-HSC_107
#> "0412" "0142" "0213" "0132" "01122" "0213" "01212" "01111" "023"
#> Prog_341 Prog_348 Prog_354 Prog_360 Prog_366 Prog_372 Prog_378 LT-HSC_108 Prog_342
#> "01212" "02121" "0412" "01112" "0142" "01121" "0322" "01211" "01112"
#> HSPC_385 HSPC_391 HSPC_397 HSPC_403 HSPC_409 HSPC_415 HSPC_421 HSPC_379 HSPC_386
#> "02111" "0311" "02111" "0421" "023" "023" "043" "02121" "0421"
#> HSPC_392 HSPC_398 HSPC_404 HSPC_410 HSPC_416 HSPC_422 HSPC_380 HSPC_387 HSPC_393
#> "0321" "0321" "01121" "01212" "0311" "0321" "0321" "0412" "0411"
#> HSPC_399 HSPC_405 HSPC_411 HSPC_417 HSPC_423 HSPC_381 HSPC_388 HSPC_394 HSPC_400
#> "0311" "0321" "01212" "01221" "01221" "02112" "01221" "02111" "0412"
#> HSPC_406 HSPC_412 HSPC_418 HSPC_424 HSPC_382 HSPC_389 HSPC_395 HSPC_401 HSPC_407
#> "0421" "01312" "0311" "0413" "01221" "0141" "043" "02111" "01311"
#> HSPC_413 HSPC_419 HSPC_425 HSPC_383 HSPC_390 HSPC_396 HSPC_402 HSPC_408 HSPC_414
#> "0421" "01312" "0413" "022" "0423" "0321" "0321" "01111" "02112"
#> HSPC_420 HSPC_426 HSPC_384 Prog_385 Prog_391 Prog_397 Prog_403 Prog_409 Prog_415
#> "01221" "0422" "02112" "01111" "0213" "01112" "01121" "01112" "01112"
#> Prog_421 Prog_379 Prog_386 Prog_392 Prog_398 Prog_404 Prog_410 Prog_416 Prog_422
#> "01112" "01122" "01112" "01222" "01112" "01113" "01121" "01121" "0413"
#> Prog_380 Prog_387 Prog_393 Prog_399 Prog_405 Prog_411 Prog_417 Prog_423 Prog_381
#> "01122" "01311" "01121" "01223" "01223" "0422" "0411" "0412" "01122"
#> Prog_388 Prog_394 Prog_400 Prog_406 Prog_412 Prog_418 Prog_424 Prog_382 Prog_389
#> "01112" "0331" "02111" "01121" "01213" "0141" "01121" "0311" "0132"
#> Prog_395 Prog_401 Prog_407 Prog_413 Prog_419 Prog_425 Prog_383 Prog_390 Prog_396
#> "01112" "0132" "0331" "01212" "01112" "0142" "01111" "043" "0141"
#> Prog_402 Prog_408 Prog_414 Prog_420 Prog_426 Prog_384 HSPC_433 HSPC_439 HSPC_445
#> "0412" "0141" "01312" "01212" "01211" "0411" "02121" "02121" "02121"
#> HSPC_451 HSPC_457 HSPC_463 LT-HSC_109 HSPC_427 HSPC_434 HSPC_440 HSPC_446 HSPC_452
#> "023" "022" "0322" "022" "023" "0213" "0423" "022" "02111"
#> HSPC_458 HSPC_464 LT-HSC_110 HSPC_428 HSPC_435 HSPC_441 HSPC_447 HSPC_453 HSPC_459
#> "02112" "02112" "0312" "02121" "0312" "0312" "0332" "0322" "0311"
#> HSPC_465 LT-HSC_111 HSPC_429 HSPC_436 HSPC_442 HSPC_448 HSPC_454 HSPC_460 HSPC_466
#> "0311" "022" "02111" "0132" "01221" "0311" "0132" "0312" "0421"
#> LT-HSC_112 HSPC_430 HSPC_437 HSPC_443 HSPC_449 HSPC_455 HSPC_461 HSPC_467 LT-HSC_113
#> "0322" "0312" "02112" "0311" "0311" "022" "0423" "0312" "0322"
#> HSPC_431 HSPC_438 HSPC_444 HSPC_450 HSPC_456 HSPC_462 HSPC_468 LT-HSC_114 HSPC_432
#> "0312" "0213" "022" "022" "01221" "0312" "0311" "023" "022"
#> Prog_433 Prog_439 Prog_445 Prog_451 Prog_457 Prog_463 LT-HSC_115 Prog_427 Prog_434
#> "0311" "0331" "0321" "01312" "0141" "0331" "01221" "022" "01111"
#> Prog_440 Prog_446 Prog_452 Prog_458 Prog_464 LT-HSC_116 Prog_428 Prog_435 Prog_441
#> "043" "0321" "02121" "043" "0321" "0312" "01221" "0411" "01211"
#> Prog_447 Prog_453 Prog_459 Prog_465 LT-HSC_117 Prog_429 Prog_436 Prog_442 Prog_448
#> "01223" "0142" "0331" "043" "0312" "01111" "01221" "02112" "0332"
#> Prog_454 Prog_460 Prog_466 LT-HSC_118 Prog_430 Prog_437 Prog_443 Prog_449 Prog_455
#> "0412" "0421" "0411" "02112" "01121" "0132" "01311" "01111" "0312"
#> Prog_461 Prog_467 LT-HSC_119 Prog_431 Prog_438 Prog_444 Prog_450 Prog_456 Prog_462
#> "022" "0331" "0213" "0331" "022" "01111" "01222" "01223" "0423"
#> Prog_468 LT-HSC_120 Prog_432 HSPC_475 HSPC_481 HSPC_487 HSPC_493 HSPC_499 HSPC_505
#> "0411" "0413" "043" "022" "023" "02121" "022" "022" "0421"
#> LT-HSC_121 HSPC_469 HSPC_476 HSPC_482 HSPC_488 HSPC_494 HSPC_500 HSPC_506 LT-HSC_122
#> "0213" "023" "02111" "022" "022" "022" "022" "022" "0423"
#> HSPC_470 HSPC_477 HSPC_483 HSPC_489 HSPC_495 HSPC_501 HSPC_507 LT-HSC_123 HSPC_471
#> "022" "01221" "022" "0421" "043" "023" "022" "022" "022"
#> HSPC_478 HSPC_484 HSPC_490 HSPC_496 HSPC_502 HSPC_508 LT-HSC_124 HSPC_472 HSPC_479
#> "022" "02112" "0311" "0312" "0321" "01311" "0312" "0321" "0312"
#> HSPC_485 HSPC_491 HSPC_497 HSPC_503 HSPC_509 LT-HSC_125 HSPC_473 HSPC_480 HSPC_486
#> "01212" "0412" "022" "01212" "0422" "0312" "0311" "0321" "0423"
#> HSPC_492 HSPC_498 HSPC_504 HSPC_510 LT-HSC_126 HSPC_474 Prog_475 Prog_481 Prog_487
#> "0321" "0311" "022" "0412" "0322" "0321" "01312" "0332" "01312"
#> Prog_493 Prog_499 Prog_505 LT-HSC_127 Prog_469 Prog_476 Prog_482 Prog_488 Prog_494
#> "01222" "01212" "01312" "02122" "0423" "01213" "01222" "01311" "043"
#> Prog_500 Prog_506 LT-HSC_128 Prog_470 Prog_477 Prog_483 Prog_489 Prog_495 Prog_501
#> "01312" "01211" "0312" "01213" "01121" "043" "01211" "0321" "01223"
#> Prog_507 LT-HSC_129 Prog_471 Prog_478 Prog_484 Prog_490 Prog_496 Prog_502 Prog_508
#> "0411" "02112" "01222" "01113" "01223" "043" "0331" "01121" "01113"
#> LT-HSC_130 Prog_472 Prog_479 Prog_485 Prog_491 Prog_497 Prog_503 Prog_509 LT-HSC_131
#> "0132" "043" "01222" "0132" "01311" "0411" "043" "0311" "0312"
#> Prog_473 Prog_480 Prog_486 Prog_492 Prog_498 Prog_504 Prog_510 LT-HSC_132 Prog_474
#> "01223" "023" "01211" "0311" "0213" "01213" "0422" "0141" "0322"
#> HSPC_517 HSPC_523 HSPC_529 HSPC_535 HSPC_541 HSPC_547 LT-HSC_133 HSPC_511 HSPC_518
#> "023" "0322" "02111" "022" "022" "0322" "02121" "023" "022"
#> HSPC_524 HSPC_530 HSPC_536 HSPC_542 HSPC_548 LT-HSC_134 HSPC_512 HSPC_519 HSPC_525
#> "022" "022" "02111" "02111" "022" "023" "0321" "02112" "023"
#> HSPC_531 HSPC_537 HSPC_543 HSPC_549 LT-HSC_135 HSPC_513 HSPC_520 HSPC_526 HSPC_532
#> "022" "0422" "0422" "022" "022" "02121" "0422" "0311" "0421"
#> HSPC_538 HSPC_544 HSPC_550 LT-HSC_136 HSPC_514 HSPC_521 HSPC_527 HSPC_533 HSPC_539
#> "0311" "01213" "0422" "023" "0312" "022" "01221" "0322" "022"
#> HSPC_545 HSPC_551 LT-HSC_137 HSPC_515 HSPC_522 HSPC_528 HSPC_534 HSPC_540 HSPC_546
#> "022" "0421" "022" "0311" "022" "0413" "0311" "0321" "022"
#> HSPC_552 LT-HSC_138 HSPC_516 Prog_517 Prog_523 Prog_529 Prog_535 Prog_541 Prog_547
#> "0421" "022" "0321" "0332" "01122" "01311" "01122" "01311" "0132"
#> LT-HSC_139 Prog_511 Prog_518 Prog_524 Prog_530 Prog_536 Prog_542 Prog_548 LT-HSC_140
#> "0312" "0312" "0413" "0422" "01213" "01122" "0413" "01122" "022"
#> Prog_512 Prog_519 Prog_525 Prog_531 Prog_537 Prog_543 Prog_549 LT-HSC_141 Prog_513
#> "0411" "0422" "043" "01312" "022" "0142" "0413" "02111" "0331"
#> Prog_520 Prog_526 Prog_532 Prog_538 Prog_544 Prog_550 LT-HSC_142 Prog_514 Prog_521
#> "01311" "023" "022" "02121" "023" "01213" "01213" "01223" "01213"
#> Prog_527 Prog_533 Prog_539 Prog_545 Prog_551 LT-HSC_143 Prog_515 Prog_522 Prog_528
#> "01213" "022" "0411" "0141" "01212" "0132" "043" "022" "0142"
#> Prog_534 Prog_540 Prog_546 Prog_552 LT-HSC_144 Prog_516 HSPC_559 HSPC_565 HSPC_571
#> "043" "023" "023" "0412" "0421" "01111" "022" "023" "0311"
#> HSPC_577 HSPC_583 HSPC_589 LT-HSC_145 HSPC_553 HSPC_560 HSPC_566 HSPC_572 HSPC_578
#> "022" "02111" "022" "022" "01312" "022" "022" "023" "022"
#> HSPC_584 HSPC_590 LT-HSC_146 HSPC_554 HSPC_561 HSPC_567 HSPC_573 HSPC_579 HSPC_585
#> "022" "0421" "0312" "022" "02111" "0311" "022" "0311" "022"
#> HSPC_591 LT-HSC_147 HSPC_555 HSPC_562 HSPC_568 HSPC_574 HSPC_580 HSPC_586 HSPC_592
#> "023" "022" "022" "023" "022" "01213" "0322" "0321" "0311"
#> LT-HSC_148 HSPC_556 HSPC_563 HSPC_569 HSPC_575 HSPC_581 HSPC_587 HSPC_593 LT-HSC_149
#> "0423" "0321" "0312" "0413" "0311" "02112" "02112" "022" "022"
#> HSPC_557 HSPC_564 HSPC_570 HSPC_576 HSPC_582 HSPC_588 HSPC_594 LT-HSC_150 HSPC_558
#> "0321" "02112" "02112" "022" "022" "02121" "022" "022" "02112"
#> Prog_559 Prog_565 Prog_571 Prog_577 Prog_583 Prog_589 LT-HSC_151 Prog_553 Prog_560
#> "01222" "01213" "01223" "01212" "023" "023" "0322" "043" "01211"
#> Prog_566 Prog_572 Prog_578 Prog_584 Prog_590 LT-HSC_152 Prog_554 Prog_561 Prog_567
#> "0142" "0321" "0413" "01211" "01221" "022" "0311" "0421" "01212"
#> Prog_573 Prog_579 Prog_585 Prog_591 LT-HSC_153 Prog_555 Prog_562 Prog_568 Prog_574
#> "023" "01223" "0331" "023" "022" "0312" "01121" "0331" "01211"
#> Prog_580 Prog_586 Prog_592 LT-HSC_154 Prog_556 Prog_563 Prog_569 Prog_575 Prog_581
#> "0311" "043" "01111" "02112" "0331" "0213" "01311" "01113" "01222"
#> Prog_587 Prog_593 LT-HSC_155 Prog_557 Prog_564 Prog_570 Prog_576 Prog_582 Prog_588
#> "0132" "01222" "02111" "01222" "0312" "0411" "0141" "01223" "0312"
#> Prog_594 LT-HSC_156 Prog_558 HSPC_601 HSPC_607 HSPC_613 HSPC_619 HSPC_625 HSPC_631
#> "0331" "01222" "0311" "0422" "023" "0421" "02112" "022" "0412"
#> LT-HSC_157 HSPC_595 HSPC_602 HSPC_608 HSPC_614 HSPC_620 HSPC_626 HSPC_632 LT-HSC_158
#> "023" "0312" "022" "022" "0421" "022" "023" "02112" "022"
#> HSPC_596 HSPC_603 HSPC_609 HSPC_615 HSPC_621 HSPC_627 HSPC_633 LT-HSC_159 HSPC_597
#> "0423" "0321" "023" "023" "02111" "0422" "023" "0411" "0423"
#> HSPC_604 HSPC_610 HSPC_616 HSPC_622 HSPC_628 HSPC_634 LT-HSC_160 HSPC_598 HSPC_605
#> "022" "022" "02111" "02111" "0422" "0422" "023" "0423" "0213"
#> HSPC_611 HSPC_617 HSPC_623 HSPC_629 HSPC_635 LT-HSC_161 HSPC_599 HSPC_606 HSPC_612
#> "02112" "0322" "0422" "0421" "0421" "023" "022" "0312" "0311"
#> HSPC_618 HSPC_624 HSPC_630 HSPC_636 LT-HSC_162 HSPC_600 Prog_601 Prog_607 Prog_613
#> "022" "0322" "022" "0311" "023" "023" "02112" "01213" "0331"
#> Prog_619 Prog_625 Prog_631 LT-HSC_163 Prog_595 Prog_602 Prog_608 Prog_614 Prog_620
#> "022" "0413" "0322" "022" "022" "0132" "01122" "0132" "0422"
#> Prog_626 Prog_632 LT-HSC_164 Prog_596 Prog_603 Prog_609 Prog_615 Prog_621 Prog_627
#> "01211" "01222" "0312" "0332" "01122" "01212" "0411" "01212" "0311"
#> Prog_633 LT-HSC_165 Prog_597 Prog_604 Prog_610 Prog_616 Prog_622 Prog_628 Prog_634
#> "043" "022" "0331" "0331" "0331" "01112" "01213" "01212" "043"
#> LT-HSC_166 Prog_598 Prog_605 Prog_611 Prog_617 Prog_623 Prog_629 Prog_635 LT-HSC_167
#> "0421" "01212" "0141" "0331" "0311" "0132" "01221" "0331" "022"
#> Prog_599 Prog_606 Prog_612 Prog_618 Prog_624 Prog_630 Prog_636 LT-HSC_168 Prog_600
#> "01222" "0312" "01311" "01222" "01222" "01312" "0213" "01311" "01222"
#> HSPC_643 HSPC_649 HSPC_655 HSPC_661 HSPC_667 HSPC_673 LT-HSC_169 HSPC_637 HSPC_644
#> "0422" "0322" "02121" "0422" "022" "022" "023" "0312" "0132"
#> HSPC_650 HSPC_656 HSPC_662 HSPC_668 HSPC_674 LT-HSC_170 HSPC_638 HSPC_645 HSPC_651
#> "02112" "022" "022" "0321" "0311" "0423" "0132" "0322" "0411"
#> HSPC_657 HSPC_663 HSPC_669 HSPC_675 LT-HSC_171 HSPC_639 HSPC_646 HSPC_652 HSPC_658
#> "023" "0412" "022" "02121" "0423" "0312" "0312" "0423" "0412"
#> HSPC_664 HSPC_670 HSPC_676 LT-HSC_172 HSPC_640 HSPC_647 HSPC_653 HSPC_659 HSPC_665
#> "0322" "023" "022" "022" "0312" "022" "02111" "02112" "0423"
#> HSPC_671 HSPC_677 LT-HSC_173 HSPC_641 HSPC_648 HSPC_654 HSPC_660 HSPC_666 HSPC_672
#> "0321" "023" "022" "0312" "022" "0423" "043" "0413" "0321"
#> HSPC_678 LT-HSC_174 HSPC_642 Prog_643 Prog_649 Prog_655 Prog_661 Prog_667 Prog_673
#> "022" "0312" "02112" "0412" "01121" "01121" "01312" "043" "0423"
#> LT-HSC_175 Prog_637 Prog_644 Prog_650 Prog_656 Prog_662 Prog_668 Prog_674 LT-HSC_176
#> "02111" "0141" "0332" "01212" "0332" "0332" "023" "0332" "022"
#> Prog_638 Prog_645 Prog_651 Prog_657 Prog_663 Prog_669 Prog_675 LT-HSC_177 Prog_639
#> "01122" "043" "0312" "01112" "01122" "023" "01223" "022" "0142"
#> Prog_646 Prog_652 Prog_658 Prog_664 Prog_670 Prog_676 LT-HSC_178 Prog_640 Prog_647
#> "01223" "01222" "01213" "023" "01211" "0331" "02112" "01113" "043"
#> Prog_653 Prog_659 Prog_665 Prog_671 Prog_677 LT-HSC_179 Prog_641 Prog_648 Prog_654
#> "043" "0332" "0311" "0312" "01121" "0312" "023" "0421" "0132"
#> Prog_660 Prog_666 Prog_672 Prog_678 LT-HSC_180 Prog_642 HSPC_685 HSPC_691 HSPC_697
#> "0312" "0332" "0312" "0411" "043" "0322" "0213" "02121" "0413"
#> HSPC_703 HSPC_709 HSPC_715 LT-HSC_181 HSPC_679 HSPC_686 HSPC_692 HSPC_698 HSPC_704
#> "022" "023" "02122" "02121" "0312" "02112" "023" "022" "022"
#> HSPC_710 HSPC_716 LT-HSC_182 HSPC_680 HSPC_687 HSPC_693 HSPC_699 HSPC_705 HSPC_711
#> "02111" "022" "0213" "022" "023" "023" "022" "01213" "02111"
#> HSPC_717 LT-HSC_183 HSPC_681 HSPC_688 HSPC_694 HSPC_700 HSPC_706 HSPC_712 HSPC_718
#> "0412" "0312" "0423" "02111" "02111" "0413" "0332" "02111" "02111"
#> LT-HSC_184 HSPC_682 HSPC_689 HSPC_695 HSPC_701 HSPC_707 HSPC_713 HSPC_719 LT-HSC_185
#> "0311" "01213" "022" "0132" "0421" "0421" "02121" "022" "023"
#> HSPC_683 HSPC_690 HSPC_696 HSPC_702 HSPC_708 HSPC_714 HSPC_720 LT-HSC_186 HSPC_684
#> "0412" "022" "043" "022" "0311" "022" "01213" "02111" "023"
#> Prog_685 Prog_691 Prog_697 Prog_703 Prog_709 Prog_715 LT-HSC_187 Prog_679 Prog_686
#> "01211" "0213" "01122" "043" "0141" "01212" "0312" "01223" "0413"
#> Prog_692 Prog_698 Prog_704 Prog_710 Prog_716 LT-HSC_188 Prog_680 Prog_687 Prog_693
#> "0321" "01312" "0311" "0311" "0331" "0312" "01221" "01212" "01221"
#> Prog_699 Prog_705 Prog_711 Prog_717 LT-HSC_189 Prog_681 Prog_688 Prog_694 Prog_700
#> "01213" "01213" "0331" "01212" "02111" "01312" "01122" "0332" "01112"
#> Prog_706 Prog_712 Prog_718 LT-HSC_190 Prog_682 Prog_689 Prog_695 Prog_701 Prog_707
#> "01311" "0132" "01222" "023" "0132" "0332" "01111" "01112" "0332"
#> Prog_713 Prog_719 LT-HSC_191 Prog_683 Prog_690 Prog_696 Prog_702 Prog_708 Prog_714
#> "01311" "01121" "0312" "023" "0332" "0411" "0142" "0141" "0141"
#> Prog_720 LT-HSC_192 Prog_684 HSPC_727 HSPC_733 HSPC_739 HSPC_745 HSPC_751 HSPC_757
#> "0141" "01221" "0321" "022" "022" "023" "023" "022" "022"
#> LT-HSC_193 HSPC_721 HSPC_728 HSPC_734 HSPC_740 HSPC_746 HSPC_752 HSPC_758 LT-HSC_194
#> "022" "023" "0213" "01213" "022" "023" "023" "0322" "022"
#> HSPC_722 HSPC_729 HSPC_735 HSPC_741 HSPC_747 HSPC_753 HSPC_759 LT-HSC_195 HSPC_723
#> "0312" "0312" "0423" "02112" "022" "0312" "0321" "0322" "0322"
#> HSPC_730 HSPC_736 HSPC_742 HSPC_748 HSPC_754 HSPC_760 LT-HSC_196 HSPC_724 HSPC_731
#> "0311" "0322" "0322" "022" "0213" "0421" "02111" "0322" "0412"
#> HSPC_737 HSPC_743 HSPC_749 HSPC_755 HSPC_761 LT-HSC_197 HSPC_725 HSPC_732 HSPC_738
#> "01212" "0311" "022" "0312" "0322" "022" "023" "0322" "022"
#> HSPC_744 HSPC_750 HSPC_756 HSPC_762 LT-HSC_198 HSPC_726 Prog_727 Prog_733 Prog_739
#> "0421" "0311" "022" "0423" "022" "0213" "01213" "0331" "0412"
#> Prog_745 Prog_751 Prog_757 LT-HSC_199 Prog_721 Prog_728 Prog_734 Prog_740 Prog_746
#> "0332" "0332" "0412" "02112" "0141" "0321" "0142" "0332" "0411"
#> Prog_752 Prog_758 LT-HSC_200 Prog_722 Prog_729 Prog_735 Prog_741 Prog_747 Prog_753
#> "0331" "0331" "022" "0142" "023" "01213" "0213" "0332" "01311"
#> Prog_759 LT-HSC_201 Prog_723 Prog_730 Prog_736 Prog_742 Prog_748 Prog_754 Prog_760
#> "01212" "022" "01122" "01121" "01311" "0213" "0413" "01312" "01222"
#> LT-HSC_202 Prog_724 Prog_731 Prog_737 Prog_743 Prog_749 Prog_755 Prog_761 LT-HSC_203
#> "0312" "0332" "01121" "0312" "01213" "043" "0213" "0412" "0213"
#> Prog_725 Prog_732 Prog_738 Prog_744 Prog_750 Prog_756 Prog_762 LT-HSC_204 Prog_726
#> "0311" "043" "0332" "0332" "0413" "043" "0311" "0322" "0311"
#> HSPC_769 HSPC_775 HSPC_781 HSPC_787 HSPC_793 HSPC_799 LT-HSC_205 HSPC_763 HSPC_770
#> "023" "023" "022" "023" "02121" "023" "023" "02121" "0422"
#> HSPC_776 HSPC_782 HSPC_788 HSPC_794 HSPC_800 LT-HSC_206 HSPC_764 HSPC_771 HSPC_777
#> "023" "022" "023" "0321" "0413" "022" "022" "0321" "0321"
#> HSPC_783 HSPC_789 HSPC_795 HSPC_801 LT-HSC_207 HSPC_765 HSPC_772 HSPC_778 HSPC_784
#> "022" "0421" "0322" "0311" "0422" "023" "0423" "0312" "0312"
#> HSPC_790 HSPC_796 HSPC_802 LT-HSC_208 HSPC_766 HSPC_773 HSPC_779 HSPC_785 HSPC_791
#> "0423" "01212" "022" "022" "01221" "0322" "0422" "0311" "043"
#> HSPC_797 HSPC_803 LT-HSC_209 HSPC_767 HSPC_774 HSPC_780 HSPC_786 HSPC_792 HSPC_798
#> "0321" "022" "02112" "01221" "0321" "0311" "0311" "0213" "022"
#> HSPC_804 LT-HSC_210 HSPC_768 Prog_769 Prog_775 Prog_781 Prog_787 Prog_793 Prog_799
#> "022" "022" "023" "01223" "0332" "01223" "043" "0132" "0332"
#> LT-HSC_211 Prog_763 Prog_770 Prog_776 Prog_782 Prog_788 Prog_794 Prog_800 LT-HSC_212
#> "0423" "01221" "0142" "01121" "01221" "01122" "01222" "01223" "0312"
#> Prog_764 Prog_771 Prog_777 Prog_783 Prog_789 Prog_795 Prog_801 LT-HSC_213 Prog_765
#> "01223" "0142" "01211" "0141" "01211" "01211" "0132" "022" "01311"
#> Prog_772 Prog_778 Prog_784 Prog_790 Prog_796 Prog_802 LT-HSC_214 Prog_766 Prog_773
#> "01223" "023" "0321" "01121" "0412" "0141" "0311" "02122" "02122"
#> Prog_779 Prog_785 Prog_791 Prog_797 Prog_803 LT-HSC_215 Prog_767 Prog_774 Prog_780
#> "01311" "0332" "01211" "0311" "043" "0322" "01113" "01212" "01113"
#> Prog_786 Prog_792 Prog_798 Prog_804 LT-HSC_216 Prog_768 HSPC_811 HSPC_817 HSPC_823
#> "01113" "01312" "01311" "01212" "0411" "01221" "02122" "02122" "02121"
#> HSPC_829 HSPC_835 HSPC_841 HSPC_847 HSPC_805 HSPC_812 HSPC_818 HSPC_824 HSPC_830
#> "0213" "0321" "043" "023" "02122" "01221" "0312" "0311" "02121"
#> HSPC_836 HSPC_842 HSPC_848 HSPC_806 HSPC_813 HSPC_819 HSPC_825 HSPC_831 HSPC_837
#> "023" "023" "022" "023" "01221" "0421" "0311" "0311" "0412"
#> HSPC_843 HSPC_849 HSPC_807 HSPC_814 HSPC_820 HSPC_826 HSPC_832 HSPC_838 HSPC_844
#> "0311" "022" "01212" "0413" "01221" "0311" "0321" "0321" "022"
#> HSPC_850 HSPC_808 HSPC_815 HSPC_821 HSPC_827 HSPC_833 HSPC_839 HSPC_845 HSPC_851
#> "02111" "01221" "0321" "0423" "022" "01221" "0413" "0311" "023"
#> HSPC_809 HSPC_816 HSPC_822 HSPC_828 HSPC_834 HSPC_840 HSPC_846 HSPC_852 HSPC_810
#> "022" "0421" "0312" "0321" "0322" "022" "0422" "022" "022"
#> Prog_811 Prog_817 Prog_823 Prog_829 Prog_835 Prog_841 Prog_847 Prog_805 Prog_812
#> "0142" "0132" "0311" "01212" "0141" "0411" "01223" "0422" "023"
#> Prog_818 Prog_824 Prog_830 Prog_836 Prog_842 Prog_848 Prog_806 Prog_813 Prog_819
#> "0142" "01223" "01122" "01311" "0141" "022" "0332" "01121" "01121"
#> Prog_825 Prog_831 Prog_837 Prog_843 Prog_849 Prog_807 Prog_814 Prog_820 Prog_826
#> "01113" "0141" "0141" "01312" "0422" "0141" "01121" "0132" "01122"
#> Prog_832 Prog_838 Prog_844 Prog_850 Prog_808 Prog_815 Prog_821 Prog_827 Prog_833
#> "01211" "01121" "0141" "0142" "01212" "0141" "01113" "0331" "01221"
#> Prog_839 Prog_845 Prog_851 Prog_809 Prog_816 Prog_822 Prog_828 Prog_834 Prog_840
#> "01311" "01311" "0332" "0132" "01223" "01113" "01113" "01212" "01212"
#> Prog_846 Prog_852 Prog_810
#> "01211" "0411" "01311"
get_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 710))
#> HSPC_007 HSPC_013 HSPC_019 HSPC_025 HSPC_031 HSPC_037 LT-HSC_001 HSPC_001 HSPC_008
#> "0213" "023" "02112" "042" "0322" "042" "023" "01221" "042"
#> HSPC_014 HSPC_020 HSPC_026 HSPC_032 HSPC_038 LT-HSC_002 HSPC_002 HSPC_009 HSPC_015
#> "022" "042" "0412" "02111" "022" "042" "022" "022" "023"
#> HSPC_021 HSPC_027 HSPC_033 HSPC_039 LT-HSC_003 HSPC_003 HSPC_010 HSPC_016 HSPC_022
#> "022" "0332" "0311" "02112" "023" "01213" "0213" "01221" "0412"
#> HSPC_028 HSPC_034 HSPC_040 LT-HSC_004 HSPC_004 HSPC_011 HSPC_017 HSPC_023 HSPC_029
#> "0312" "01213" "0321" "022" "0311" "042" "022" "042" "02112"
#> HSPC_035 HSPC_041 LT-HSC_005 HSPC_005 HSPC_012 HSPC_018 HSPC_024 HSPC_030 HSPC_036
#> "022" "042" "02112" "02112" "042" "042" "022" "0311" "01212"
#> HSPC_042 LT-HSC_006 HSPC_006 Prog_007 Prog_013 Prog_019 Prog_025 Prog_031 Prog_037
#> "0322" "022" "0412" "01223" "01212" "01312" "0411" "0331" "0332"
#> LT-HSC_007 Prog_001 Prog_008 Prog_014 Prog_020 Prog_026 Prog_032 Prog_038 LT-HSC_008
#> "042" "043" "01112" "01121" "0142" "0331" "0141" "0141" "0312"
#> Prog_002 Prog_009 Prog_015 Prog_021 Prog_027 Prog_033 Prog_039 LT-HSC_009 Prog_003
#> "01213" "01112" "01212" "0141" "01222" "01121" "01112" "022" "01222"
#> Prog_010 Prog_016 Prog_022 Prog_028 Prog_034 Prog_040 LT-HSC_010 Prog_004 Prog_011
#> "0412" "0411" "0411" "01122" "02112" "042" "0412" "0331" "0142"
#> Prog_017 Prog_023 Prog_029 Prog_035 Prog_041 LT-HSC_011 Prog_005 Prog_012 Prog_018
#> "01211" "01222" "0142" "01111" "0213" "0213" "0213" "022" "022"
#> Prog_024 Prog_030 Prog_036 Prog_042 LT-HSC_012 Prog_006 HSPC_049 HSPC_055 HSPC_061
#> "0142" "0411" "0412" "0411" "0411" "01111" "0311" "042" "042"
#> HSPC_067 HSPC_073 HSPC_079 LT-HSC_013 HSPC_043 HSPC_050 HSPC_056 HSPC_062 HSPC_068
#> "042" "022" "0412" "022" "042" "043" "022" "0413" "022"
#> HSPC_074 HSPC_080 LT-HSC_014 HSPC_044 HSPC_051 HSPC_057 HSPC_063 HSPC_069 HSPC_075
#> "022" "0321" "022" "043" "0322" "022" "0412" "0321" "022"
#> HSPC_081 LT-HSC_015 HSPC_045 HSPC_052 HSPC_058 HSPC_064 HSPC_070 HSPC_076 HSPC_082
#> "0321" "022" "042" "043" "0311" "0413" "0332" "0321" "042"
#> LT-HSC_016 HSPC_046 HSPC_053 HSPC_059 HSPC_065 HSPC_071 HSPC_077 HSPC_083 LT-HSC_017
#> "022" "0322" "01212" "02112" "0321" "0413" "01212" "022" "022"
#> HSPC_047 HSPC_054 HSPC_060 HSPC_066 HSPC_072 HSPC_078 HSPC_084 LT-HSC_018 HSPC_048
#> "023" "0312" "0311" "0311" "0413" "043" "042" "022" "0322"
#> Prog_049 Prog_055 Prog_061 Prog_067 Prog_073 Prog_079 LT-HSC_019 Prog_043 Prog_050
#> "01112" "01211" "01121" "0142" "0321" "01112" "02112" "0132" "01211"
#> Prog_056 Prog_062 Prog_068 Prog_074 Prog_080 LT-HSC_020 Prog_044 Prog_051 Prog_057
#> "01222" "042" "0321" "0411" "043" "0311" "0321" "0141" "01312"
#> Prog_063 Prog_069 Prog_075 Prog_081 LT-HSC_021 Prog_045 Prog_052 Prog_058 Prog_064
#> "043" "01222" "01211" "01112" "0413" "0132" "043" "0142" "0141"
#> Prog_070 Prog_076 Prog_082 LT-HSC_022 Prog_046 Prog_053 Prog_059 Prog_065 Prog_071
#> "0412" "0141" "01111" "022" "01122" "01121" "01222" "01312" "01223"
#> Prog_077 Prog_083 LT-HSC_023 Prog_047 Prog_054 Prog_060 Prog_066 Prog_072 Prog_078
#> "01222" "01212" "022" "01211" "0411" "0213" "0142" "0331" "0142"
#> Prog_084 LT-HSC_024 Prog_048 HSPC_091 HSPC_097 HSPC_103 HSPC_109 HSPC_115 HSPC_121
#> "01121" "0331" "0321" "02122" "023" "022" "043" "022" "023"
#> LT-HSC_025 HSPC_085 HSPC_092 HSPC_098 HSPC_104 HSPC_110 HSPC_116 HSPC_122 LT-HSC_026
#> "02121" "042" "02121" "043" "023" "043" "02111" "0311" "022"
#> HSPC_086 HSPC_093 HSPC_099 HSPC_105 HSPC_111 HSPC_117 HSPC_123 LT-HSC_027 HSPC_087
#> "02112" "02112" "042" "022" "022" "042" "022" "023" "022"
#> HSPC_094 HSPC_100 HSPC_106 HSPC_112 HSPC_118 HSPC_124 LT-HSC_028 HSPC_088 HSPC_095
#> "01221" "0321" "022" "02111" "0311" "02111" "0321" "0321" "022"
#> HSPC_101 HSPC_107 HSPC_113 HSPC_119 HSPC_125 LT-HSC_029 HSPC_089 HSPC_096 HSPC_102
#> "01213" "042" "023" "023" "0311" "02122" "0321" "043" "01211"
#> HSPC_108 HSPC_114 HSPC_120 HSPC_126 LT-HSC_030 HSPC_090 Prog_091 Prog_097 Prog_103
#> "0311" "0322" "0312" "0322" "02121" "01221" "01111" "01211" "01221"
#> Prog_109 Prog_115 Prog_121 LT-HSC_031 Prog_085 Prog_092 Prog_098 Prog_104 Prog_110
#> "0412" "0142" "0213" "0321" "01222" "0331" "01121" "02111" "01112"
#> Prog_116 Prog_122 LT-HSC_032 Prog_086 Prog_093 Prog_099 Prog_105 Prog_111 Prog_117
#> "01221" "0331" "01111" "02122" "01223" "01222" "01211" "0142" "0132"
#> Prog_123 LT-HSC_033 Prog_087 Prog_094 Prog_100 Prog_106 Prog_112 Prog_118 Prog_124
#> "01211" "0312" "01211" "0141" "01121" "0311" "01112" "0412" "0332"
#> LT-HSC_034 Prog_088 Prog_095 Prog_101 Prog_107 Prog_113 Prog_119 Prog_125 LT-HSC_035
#> "0312" "043" "01122" "01312" "01112" "01223" "01111" "0311" "02122"
#> Prog_089 Prog_096 Prog_102 Prog_108 Prog_114 Prog_120 Prog_126 LT-HSC_036 Prog_090
#> "0142" "0322" "0311" "0411" "0413" "023" "0141" "0331" "01121"
#> HSPC_133 HSPC_139 HSPC_145 HSPC_151 HSPC_157 HSPC_163 LT-HSC_037 HSPC_127 HSPC_134
#> "022" "022" "023" "042" "043" "023" "023" "0412" "023"
#> HSPC_140 HSPC_146 HSPC_152 HSPC_158 HSPC_164 LT-HSC_038 HSPC_128 HSPC_135 HSPC_141
#> "023" "0412" "022" "042" "022" "023" "023" "0312" "022"
#> HSPC_147 HSPC_153 HSPC_159 HSPC_165 LT-HSC_039 HSPC_129 HSPC_136 HSPC_142 HSPC_148
#> "023" "022" "042" "043" "022" "02111" "042" "042" "043"
#> HSPC_154 HSPC_160 HSPC_166 LT-HSC_040 HSPC_130 HSPC_137 HSPC_143 HSPC_149 HSPC_155
#> "043" "02112" "042" "022" "042" "02111" "022" "022" "023"
#> HSPC_161 HSPC_167 LT-HSC_041 HSPC_131 HSPC_138 HSPC_144 HSPC_150 HSPC_156 HSPC_162
#> "042" "023" "022" "022" "01221" "0312" "02111" "01221" "0322"
#> HSPC_168 LT-HSC_042 HSPC_132 Prog_133 Prog_139 Prog_145 Prog_151 Prog_157 Prog_163
#> "0413" "022" "0132" "01211" "01121" "01213" "0321" "01222" "01113"
#> LT-HSC_043 Prog_127 Prog_134 Prog_140 Prog_146 Prog_152 Prog_158 Prog_164 LT-HSC_044
#> "0132" "0321" "043" "01111" "01113" "043" "01112" "0213" "043"
#> Prog_128 Prog_135 Prog_141 Prog_147 Prog_153 Prog_159 Prog_165 LT-HSC_045 Prog_129
#> "01211" "0322" "0132" "02112" "01222" "0412" "043" "0412" "01311"
#> Prog_136 Prog_142 Prog_148 Prog_154 Prog_160 Prog_166 LT-HSC_046 Prog_130 Prog_137
#> "0132" "0332" "023" "0331" "022" "0141" "0312" "01312" "01222"
#> Prog_143 Prog_149 Prog_155 Prog_161 Prog_167 LT-HSC_047 Prog_131 Prog_138 Prog_144
#> "01312" "0413" "01211" "0332" "01212" "0213" "0331" "02111" "043"
#> Prog_150 Prog_156 Prog_162 Prog_168 LT-HSC_048 Prog_132 HSPC_175 HSPC_181 HSPC_187
#> "01312" "02122" "0412" "01312" "023" "01312" "042" "022" "022"
#> HSPC_193 HSPC_199 HSPC_205 LT-HSC_049 HSPC_169 HSPC_176 HSPC_182 HSPC_188 HSPC_194
#> "0332" "0312" "022" "022" "042" "022" "023" "02111" "02112"
#> HSPC_200 HSPC_206 LT-HSC_050 HSPC_170 HSPC_177 HSPC_183 HSPC_189 HSPC_195 HSPC_201
#> "022" "01223" "022" "023" "022" "0332" "0311" "01213" "02112"
#> HSPC_207 LT-HSC_051 HSPC_171 HSPC_178 HSPC_184 HSPC_190 HSPC_196 HSPC_202 HSPC_208
#> "0321" "022" "022" "0311" "02121" "0413" "042" "0322" "022"
#> LT-HSC_052 HSPC_172 HSPC_179 HSPC_185 HSPC_191 HSPC_197 HSPC_203 HSPC_209 LT-HSC_053
#> "01221" "01221" "01221" "023" "022" "02112" "042" "02112" "02112"
#> HSPC_173 HSPC_180 HSPC_186 HSPC_192 HSPC_198 HSPC_204 HSPC_210 LT-HSC_054 HSPC_174
#> "023" "043" "0331" "022" "0312" "0412" "043" "022" "0311"
#> Prog_175 Prog_181 Prog_187 Prog_193 Prog_199 Prog_205 LT-HSC_055 Prog_169 Prog_176
#> "0411" "02112" "0331" "042" "0321" "0413" "0132" "02112" "01221"
#> Prog_182 Prog_188 Prog_194 Prog_200 Prog_206 LT-HSC_056 Prog_170 Prog_177 Prog_183
#> "043" "0141" "023" "043" "01222" "01312" "01112" "042" "0132"
#> Prog_189 Prog_195 Prog_201 Prog_207 LT-HSC_057 Prog_171 Prog_178 Prog_184 Prog_190
#> "01222" "042" "0412" "0142" "0312" "042" "01121" "01312" "01211"
#> Prog_196 Prog_202 Prog_208 LT-HSC_058 Prog_172 Prog_179 Prog_185 Prog_191 Prog_197
#> "01111" "0213" "0331" "0322" "0141" "01311" "01111" "0331" "01312"
#> Prog_203 Prog_209 LT-HSC_059 Prog_173 Prog_180 Prog_186 Prog_192 Prog_198 Prog_204
#> "0132" "01311" "02122" "043" "0322" "01223" "01211" "02112" "023"
#> Prog_210 LT-HSC_060 Prog_174 HSPC_217 HSPC_223 HSPC_229 HSPC_235 HSPC_241 HSPC_247
#> "0322" "01311" "0213" "02122" "022" "023" "022" "02112" "023"
#> LT-HSC_061 HSPC_211 HSPC_218 HSPC_224 HSPC_230 HSPC_236 HSPC_242 HSPC_248 LT-HSC_062
#> "02121" "042" "022" "022" "042" "043" "023" "022" "023"
#> HSPC_212 HSPC_219 HSPC_225 HSPC_231 HSPC_237 HSPC_243 HSPC_249 LT-HSC_063 HSPC_213
#> "023" "042" "022" "023" "022" "0412" "022" "0332" "0413"
#> HSPC_220 HSPC_226 HSPC_232 HSPC_238 HSPC_244 HSPC_250 LT-HSC_064 HSPC_214 HSPC_221
#> "022" "02112" "023" "02122" "0322" "0413" "01121" "01213" "0312"
#> HSPC_227 HSPC_233 HSPC_239 HSPC_245 HSPC_251 LT-HSC_065 HSPC_215 HSPC_222 HSPC_228
#> "022" "042" "022" "022" "0413" "0312" "0412" "042" "023"
#> HSPC_234 HSPC_240 HSPC_246 HSPC_252 LT-HSC_066 HSPC_216 Prog_217 Prog_223 Prog_229
#> "02112" "0312" "022" "0213" "0312" "01213" "01111" "042" "01112"
#> Prog_235 Prog_241 Prog_247 LT-HSC_067 Prog_211 Prog_218 Prog_224 Prog_230 Prog_236
#> "023" "022" "0331" "0213" "01121" "01222" "0132" "0413" "01213"
#> Prog_242 Prog_248 LT-HSC_068 Prog_212 Prog_219 Prog_225 Prog_231 Prog_237 Prog_243
#> "0142" "043" "01221" "0141" "0213" "0331" "0132" "042" "01312"
#> Prog_249 LT-HSC_069 Prog_213 Prog_220 Prog_226 Prog_232 Prog_238 Prog_244 Prog_250
#> "01111" "0322" "043" "0213" "0311" "0332" "01211" "0321" "0141"
#> LT-HSC_070 Prog_214 Prog_221 Prog_227 Prog_233 Prog_239 Prog_245 Prog_251 LT-HSC_071
#> "043" "0413" "01111" "0132" "01222" "01111" "01211" "02122" "0322"
#> Prog_215 Prog_222 Prog_228 Prog_234 Prog_240 Prog_246 Prog_252 LT-HSC_072 Prog_216
#> "01113" "0322" "01311" "01212" "01221" "0332" "0322" "01211" "01113"
#> HSPC_259 HSPC_265 HSPC_271 HSPC_277 HSPC_283 HSPC_289 LT-HSC_073 HSPC_253 HSPC_260
#> "023" "022" "0412" "023" "022" "022" "023" "0413" "02112"
#> HSPC_266 HSPC_272 HSPC_278 HSPC_284 HSPC_290 LT-HSC_074 HSPC_254 HSPC_261 HSPC_267
#> "022" "02112" "042" "02112" "0413" "022" "022" "0132" "0311"
#> HSPC_273 HSPC_279 HSPC_285 HSPC_291 LT-HSC_075 HSPC_255 HSPC_262 HSPC_268 HSPC_274
#> "02112" "043" "01213" "0332" "0312" "0322" "02121" "01212" "022"
#> HSPC_280 HSPC_286 HSPC_292 LT-HSC_076 HSPC_256 HSPC_263 HSPC_269 HSPC_275 HSPC_281
#> "0412" "042" "0412" "042" "01121" "0412" "0132" "01312" "023"
#> HSPC_287 HSPC_293 LT-HSC_077 HSPC_257 HSPC_264 HSPC_270 HSPC_276 HSPC_282 HSPC_288
#> "0413" "0412" "023" "0413" "022" "0321" "0321" "01212" "01212"
#> HSPC_294 LT-HSC_078 HSPC_258 Prog_259 Prog_265 Prog_271 Prog_277 Prog_283 Prog_289
#> "0413" "022" "01222" "0312" "01121" "0332" "0312" "042" "0412"
#> LT-HSC_079 Prog_253 Prog_260 Prog_266 Prog_272 Prog_278 Prog_284 Prog_290 LT-HSC_080
#> "02112" "0142" "01223" "01221" "01223" "01121" "0142" "01122" "0321"
#> Prog_254 Prog_261 Prog_267 Prog_273 Prog_279 Prog_285 Prog_291 LT-HSC_081 Prog_255
#> "01121" "0141" "01311" "01312" "01112" "0141" "0411" "01221" "01211"
#> Prog_262 Prog_268 Prog_274 Prog_280 Prog_286 Prog_292 LT-HSC_082 Prog_256 Prog_263
#> "01223" "01223" "0141" "0332" "01121" "01222" "0322" "042" "01311"
#> Prog_269 Prog_275 Prog_281 Prog_287 Prog_293 LT-HSC_083 Prog_257 Prog_264 Prog_270
#> "01122" "01223" "0142" "01312" "0332" "02121" "0213" "023" "01311"
#> Prog_276 Prog_282 Prog_288 Prog_294 LT-HSC_084 Prog_258 HSPC_301 HSPC_307 HSPC_313
#> "01212" "01113" "01122" "01222" "0332" "0132" "023" "022" "042"
#> HSPC_319 HSPC_325 HSPC_331 LT-HSC_085 HSPC_295 HSPC_302 HSPC_308 HSPC_314 HSPC_320
#> "02122" "022" "022" "022" "0413" "023" "043" "042" "043"
#> HSPC_326 HSPC_332 LT-HSC_086 HSPC_296 HSPC_303 HSPC_309 HSPC_315 HSPC_321 HSPC_327
#> "022" "01211" "042" "022" "01221" "022" "022" "042" "01212"
#> HSPC_333 LT-HSC_087 HSPC_297 HSPC_304 HSPC_310 HSPC_316 HSPC_322 HSPC_328 HSPC_334
#> "01213" "02122" "022" "0322" "022" "023" "0312" "042" "022"
#> LT-HSC_088 HSPC_298 HSPC_305 HSPC_311 HSPC_317 HSPC_323 HSPC_329 HSPC_335 LT-HSC_089
#> "043" "0322" "0412" "02122" "023" "0311" "042" "022" "022"
#> HSPC_299 HSPC_306 HSPC_312 HSPC_318 HSPC_324 HSPC_330 HSPC_336 LT-HSC_090 HSPC_300
#> "0332" "0332" "0413" "022" "0312" "0311" "022" "0322" "01221"
#> Prog_301 Prog_307 Prog_313 Prog_319 Prog_325 Prog_331 LT-HSC_091 Prog_295 Prog_302
#> "0411" "0412" "0413" "0132" "01211" "01212" "01111" "0412" "02122"
#> Prog_308 Prog_314 Prog_320 Prog_326 Prog_332 LT-HSC_092 Prog_296 Prog_303 Prog_309
#> "01223" "0331" "01221" "01111" "01222" "02122" "01222" "022" "022"
#> Prog_315 Prog_321 Prog_327 Prog_333 LT-HSC_093 Prog_297 Prog_304 Prog_310 Prog_316
#> "0411" "0411" "01211" "043" "042" "043" "01211" "0412" "0411"
#> Prog_322 Prog_328 Prog_334 LT-HSC_094 Prog_298 Prog_305 Prog_311 Prog_317 Prog_323
#> "043" "0411" "0142" "042" "0142" "0413" "043" "02122" "0411"
#> Prog_329 Prog_335 LT-HSC_095 Prog_299 Prog_306 Prog_312 Prog_318 Prog_324 Prog_330
#> "0411" "0413" "01112" "01121" "022" "01111" "01111" "01122" "0132"
#> Prog_336 LT-HSC_096 Prog_300 HSPC_343 HSPC_349 HSPC_355 HSPC_361 HSPC_367 HSPC_373
#> "0132" "01212" "01311" "0132" "0311" "0213" "023" "022" "023"
#> LT-HSC_097 HSPC_337 HSPC_344 HSPC_350 HSPC_356 HSPC_362 HSPC_368 HSPC_374 LT-HSC_098
#> "02121" "022" "0412" "022" "043" "0411" "042" "0321" "01122"
#> HSPC_338 HSPC_345 HSPC_351 HSPC_357 HSPC_363 HSPC_369 HSPC_375 LT-HSC_099 HSPC_339
#> "01112" "043" "043" "02111" "022" "02111" "02111" "023" "0321"
#> HSPC_346 HSPC_352 HSPC_358 HSPC_364 HSPC_370 HSPC_376 LT-HSC_100 HSPC_340 HSPC_347
#> "01213" "0412" "042" "042" "01312" "042" "01112" "0213" "02112"
#> HSPC_353 HSPC_359 HSPC_365 HSPC_371 HSPC_377 LT-HSC_101 HSPC_341 HSPC_348 HSPC_354
#> "01212" "0321" "023" "01212" "0413" "0411" "01221" "0331" "022"
#> HSPC_360 HSPC_366 HSPC_372 HSPC_378 LT-HSC_102 HSPC_342 Prog_343 Prog_349 Prog_355
#> "042" "0213" "042" "02121" "01112" "01311" "0132" "0411" "0413"
#> Prog_361 Prog_367 Prog_373 LT-HSC_103 Prog_337 Prog_344 Prog_350 Prog_356 Prog_362
#> "0141" "01312" "01113" "0132" "01111" "02112" "0141" "01121" "0412"
#> Prog_368 Prog_374 LT-HSC_104 Prog_338 Prog_345 Prog_351 Prog_357 Prog_363 Prog_369
#> "0142" "0141" "02122" "01221" "0411" "0142" "01112" "0141" "0411"
#> Prog_375 LT-HSC_105 Prog_339 Prog_346 Prog_352 Prog_358 Prog_364 Prog_370 Prog_376
#> "01112" "0411" "01122" "0141" "01112" "0311" "01122" "0411" "01121"
#> LT-HSC_106 Prog_340 Prog_347 Prog_353 Prog_359 Prog_365 Prog_371 Prog_377 LT-HSC_107
#> "0412" "0142" "0213" "0132" "01122" "0213" "01212" "01111" "023"
#> Prog_341 Prog_348 Prog_354 Prog_360 Prog_366 Prog_372 Prog_378 LT-HSC_108 Prog_342
#> "01212" "02121" "0412" "01112" "0142" "01121" "0322" "01211" "01112"
#> HSPC_385 HSPC_391 HSPC_397 HSPC_403 HSPC_409 HSPC_415 HSPC_421 HSPC_379 HSPC_386
#> "02111" "0311" "02111" "042" "023" "023" "043" "02121" "042"
#> HSPC_392 HSPC_398 HSPC_404 HSPC_410 HSPC_416 HSPC_422 HSPC_380 HSPC_387 HSPC_393
#> "0321" "0321" "01121" "01212" "0311" "0321" "0321" "0412" "0411"
#> HSPC_399 HSPC_405 HSPC_411 HSPC_417 HSPC_423 HSPC_381 HSPC_388 HSPC_394 HSPC_400
#> "0311" "0321" "01212" "01221" "01221" "02112" "01221" "02111" "0412"
#> HSPC_406 HSPC_412 HSPC_418 HSPC_424 HSPC_382 HSPC_389 HSPC_395 HSPC_401 HSPC_407
#> "042" "01312" "0311" "0413" "01221" "0141" "043" "02111" "01311"
#> HSPC_413 HSPC_419 HSPC_425 HSPC_383 HSPC_390 HSPC_396 HSPC_402 HSPC_408 HSPC_414
#> "042" "01312" "0413" "022" "042" "0321" "0321" "01111" "02112"
#> HSPC_420 HSPC_426 HSPC_384 Prog_385 Prog_391 Prog_397 Prog_403 Prog_409 Prog_415
#> "01221" "042" "02112" "01111" "0213" "01112" "01121" "01112" "01112"
#> Prog_421 Prog_379 Prog_386 Prog_392 Prog_398 Prog_404 Prog_410 Prog_416 Prog_422
#> "01112" "01122" "01112" "01222" "01112" "01113" "01121" "01121" "0413"
#> Prog_380 Prog_387 Prog_393 Prog_399 Prog_405 Prog_411 Prog_417 Prog_423 Prog_381
#> "01122" "01311" "01121" "01223" "01223" "042" "0411" "0412" "01122"
#> Prog_388 Prog_394 Prog_400 Prog_406 Prog_412 Prog_418 Prog_424 Prog_382 Prog_389
#> "01112" "0331" "02111" "01121" "01213" "0141" "01121" "0311" "0132"
#> Prog_395 Prog_401 Prog_407 Prog_413 Prog_419 Prog_425 Prog_383 Prog_390 Prog_396
#> "01112" "0132" "0331" "01212" "01112" "0142" "01111" "043" "0141"
#> Prog_402 Prog_408 Prog_414 Prog_420 Prog_426 Prog_384 HSPC_433 HSPC_439 HSPC_445
#> "0412" "0141" "01312" "01212" "01211" "0411" "02121" "02121" "02121"
#> HSPC_451 HSPC_457 HSPC_463 LT-HSC_109 HSPC_427 HSPC_434 HSPC_440 HSPC_446 HSPC_452
#> "023" "022" "0322" "022" "023" "0213" "042" "022" "02111"
#> HSPC_458 HSPC_464 LT-HSC_110 HSPC_428 HSPC_435 HSPC_441 HSPC_447 HSPC_453 HSPC_459
#> "02112" "02112" "0312" "02121" "0312" "0312" "0332" "0322" "0311"
#> HSPC_465 LT-HSC_111 HSPC_429 HSPC_436 HSPC_442 HSPC_448 HSPC_454 HSPC_460 HSPC_466
#> "0311" "022" "02111" "0132" "01221" "0311" "0132" "0312" "042"
#> LT-HSC_112 HSPC_430 HSPC_437 HSPC_443 HSPC_449 HSPC_455 HSPC_461 HSPC_467 LT-HSC_113
#> "0322" "0312" "02112" "0311" "0311" "022" "042" "0312" "0322"
#> HSPC_431 HSPC_438 HSPC_444 HSPC_450 HSPC_456 HSPC_462 HSPC_468 LT-HSC_114 HSPC_432
#> "0312" "0213" "022" "022" "01221" "0312" "0311" "023" "022"
#> Prog_433 Prog_439 Prog_445 Prog_451 Prog_457 Prog_463 LT-HSC_115 Prog_427 Prog_434
#> "0311" "0331" "0321" "01312" "0141" "0331" "01221" "022" "01111"
#> Prog_440 Prog_446 Prog_452 Prog_458 Prog_464 LT-HSC_116 Prog_428 Prog_435 Prog_441
#> "043" "0321" "02121" "043" "0321" "0312" "01221" "0411" "01211"
#> Prog_447 Prog_453 Prog_459 Prog_465 LT-HSC_117 Prog_429 Prog_436 Prog_442 Prog_448
#> "01223" "0142" "0331" "043" "0312" "01111" "01221" "02112" "0332"
#> Prog_454 Prog_460 Prog_466 LT-HSC_118 Prog_430 Prog_437 Prog_443 Prog_449 Prog_455
#> "0412" "042" "0411" "02112" "01121" "0132" "01311" "01111" "0312"
#> Prog_461 Prog_467 LT-HSC_119 Prog_431 Prog_438 Prog_444 Prog_450 Prog_456 Prog_462
#> "022" "0331" "0213" "0331" "022" "01111" "01222" "01223" "042"
#> Prog_468 LT-HSC_120 Prog_432 HSPC_475 HSPC_481 HSPC_487 HSPC_493 HSPC_499 HSPC_505
#> "0411" "0413" "043" "022" "023" "02121" "022" "022" "042"
#> LT-HSC_121 HSPC_469 HSPC_476 HSPC_482 HSPC_488 HSPC_494 HSPC_500 HSPC_506 LT-HSC_122
#> "0213" "023" "02111" "022" "022" "022" "022" "022" "042"
#> HSPC_470 HSPC_477 HSPC_483 HSPC_489 HSPC_495 HSPC_501 HSPC_507 LT-HSC_123 HSPC_471
#> "022" "01221" "022" "042" "043" "023" "022" "022" "022"
#> HSPC_478 HSPC_484 HSPC_490 HSPC_496 HSPC_502 HSPC_508 LT-HSC_124 HSPC_472 HSPC_479
#> "022" "02112" "0311" "0312" "0321" "01311" "0312" "0321" "0312"
#> HSPC_485 HSPC_491 HSPC_497 HSPC_503 HSPC_509 LT-HSC_125 HSPC_473 HSPC_480 HSPC_486
#> "01212" "0412" "022" "01212" "042" "0312" "0311" "0321" "042"
#> HSPC_492 HSPC_498 HSPC_504 HSPC_510 LT-HSC_126 HSPC_474 Prog_475 Prog_481 Prog_487
#> "0321" "0311" "022" "0412" "0322" "0321" "01312" "0332" "01312"
#> Prog_493 Prog_499 Prog_505 LT-HSC_127 Prog_469 Prog_476 Prog_482 Prog_488 Prog_494
#> "01222" "01212" "01312" "02122" "042" "01213" "01222" "01311" "043"
#> Prog_500 Prog_506 LT-HSC_128 Prog_470 Prog_477 Prog_483 Prog_489 Prog_495 Prog_501
#> "01312" "01211" "0312" "01213" "01121" "043" "01211" "0321" "01223"
#> Prog_507 LT-HSC_129 Prog_471 Prog_478 Prog_484 Prog_490 Prog_496 Prog_502 Prog_508
#> "0411" "02112" "01222" "01113" "01223" "043" "0331" "01121" "01113"
#> LT-HSC_130 Prog_472 Prog_479 Prog_485 Prog_491 Prog_497 Prog_503 Prog_509 LT-HSC_131
#> "0132" "043" "01222" "0132" "01311" "0411" "043" "0311" "0312"
#> Prog_473 Prog_480 Prog_486 Prog_492 Prog_498 Prog_504 Prog_510 LT-HSC_132 Prog_474
#> "01223" "023" "01211" "0311" "0213" "01213" "042" "0141" "0322"
#> HSPC_517 HSPC_523 HSPC_529 HSPC_535 HSPC_541 HSPC_547 LT-HSC_133 HSPC_511 HSPC_518
#> "023" "0322" "02111" "022" "022" "0322" "02121" "023" "022"
#> HSPC_524 HSPC_530 HSPC_536 HSPC_542 HSPC_548 LT-HSC_134 HSPC_512 HSPC_519 HSPC_525
#> "022" "022" "02111" "02111" "022" "023" "0321" "02112" "023"
#> HSPC_531 HSPC_537 HSPC_543 HSPC_549 LT-HSC_135 HSPC_513 HSPC_520 HSPC_526 HSPC_532
#> "022" "042" "042" "022" "022" "02121" "042" "0311" "042"
#> HSPC_538 HSPC_544 HSPC_550 LT-HSC_136 HSPC_514 HSPC_521 HSPC_527 HSPC_533 HSPC_539
#> "0311" "01213" "042" "023" "0312" "022" "01221" "0322" "022"
#> HSPC_545 HSPC_551 LT-HSC_137 HSPC_515 HSPC_522 HSPC_528 HSPC_534 HSPC_540 HSPC_546
#> "022" "042" "022" "0311" "022" "0413" "0311" "0321" "022"
#> HSPC_552 LT-HSC_138 HSPC_516 Prog_517 Prog_523 Prog_529 Prog_535 Prog_541 Prog_547
#> "042" "022" "0321" "0332" "01122" "01311" "01122" "01311" "0132"
#> LT-HSC_139 Prog_511 Prog_518 Prog_524 Prog_530 Prog_536 Prog_542 Prog_548 LT-HSC_140
#> "0312" "0312" "0413" "042" "01213" "01122" "0413" "01122" "022"
#> Prog_512 Prog_519 Prog_525 Prog_531 Prog_537 Prog_543 Prog_549 LT-HSC_141 Prog_513
#> "0411" "042" "043" "01312" "022" "0142" "0413" "02111" "0331"
#> Prog_520 Prog_526 Prog_532 Prog_538 Prog_544 Prog_550 LT-HSC_142 Prog_514 Prog_521
#> "01311" "023" "022" "02121" "023" "01213" "01213" "01223" "01213"
#> Prog_527 Prog_533 Prog_539 Prog_545 Prog_551 LT-HSC_143 Prog_515 Prog_522 Prog_528
#> "01213" "022" "0411" "0141" "01212" "0132" "043" "022" "0142"
#> Prog_534 Prog_540 Prog_546 Prog_552 LT-HSC_144 Prog_516 HSPC_559 HSPC_565 HSPC_571
#> "043" "023" "023" "0412" "042" "01111" "022" "023" "0311"
#> HSPC_577 HSPC_583 HSPC_589 LT-HSC_145 HSPC_553 HSPC_560 HSPC_566 HSPC_572 HSPC_578
#> "022" "02111" "022" "022" "01312" "022" "022" "023" "022"
#> HSPC_584 HSPC_590 LT-HSC_146 HSPC_554 HSPC_561 HSPC_567 HSPC_573 HSPC_579 HSPC_585
#> "022" "042" "0312" "022" "02111" "0311" "022" "0311" "022"
#> HSPC_591 LT-HSC_147 HSPC_555 HSPC_562 HSPC_568 HSPC_574 HSPC_580 HSPC_586 HSPC_592
#> "023" "022" "022" "023" "022" "01213" "0322" "0321" "0311"
#> LT-HSC_148 HSPC_556 HSPC_563 HSPC_569 HSPC_575 HSPC_581 HSPC_587 HSPC_593 LT-HSC_149
#> "042" "0321" "0312" "0413" "0311" "02112" "02112" "022" "022"
#> HSPC_557 HSPC_564 HSPC_570 HSPC_576 HSPC_582 HSPC_588 HSPC_594 LT-HSC_150 HSPC_558
#> "0321" "02112" "02112" "022" "022" "02121" "022" "022" "02112"
#> Prog_559 Prog_565 Prog_571 Prog_577 Prog_583 Prog_589 LT-HSC_151 Prog_553 Prog_560
#> "01222" "01213" "01223" "01212" "023" "023" "0322" "043" "01211"
#> Prog_566 Prog_572 Prog_578 Prog_584 Prog_590 LT-HSC_152 Prog_554 Prog_561 Prog_567
#> "0142" "0321" "0413" "01211" "01221" "022" "0311" "042" "01212"
#> Prog_573 Prog_579 Prog_585 Prog_591 LT-HSC_153 Prog_555 Prog_562 Prog_568 Prog_574
#> "023" "01223" "0331" "023" "022" "0312" "01121" "0331" "01211"
#> Prog_580 Prog_586 Prog_592 LT-HSC_154 Prog_556 Prog_563 Prog_569 Prog_575 Prog_581
#> "0311" "043" "01111" "02112" "0331" "0213" "01311" "01113" "01222"
#> Prog_587 Prog_593 LT-HSC_155 Prog_557 Prog_564 Prog_570 Prog_576 Prog_582 Prog_588
#> "0132" "01222" "02111" "01222" "0312" "0411" "0141" "01223" "0312"
#> Prog_594 LT-HSC_156 Prog_558 HSPC_601 HSPC_607 HSPC_613 HSPC_619 HSPC_625 HSPC_631
#> "0331" "01222" "0311" "042" "023" "042" "02112" "022" "0412"
#> LT-HSC_157 HSPC_595 HSPC_602 HSPC_608 HSPC_614 HSPC_620 HSPC_626 HSPC_632 LT-HSC_158
#> "023" "0312" "022" "022" "042" "022" "023" "02112" "022"
#> HSPC_596 HSPC_603 HSPC_609 HSPC_615 HSPC_621 HSPC_627 HSPC_633 LT-HSC_159 HSPC_597
#> "042" "0321" "023" "023" "02111" "042" "023" "0411" "042"
#> HSPC_604 HSPC_610 HSPC_616 HSPC_622 HSPC_628 HSPC_634 LT-HSC_160 HSPC_598 HSPC_605
#> "022" "022" "02111" "02111" "042" "042" "023" "042" "0213"
#> HSPC_611 HSPC_617 HSPC_623 HSPC_629 HSPC_635 LT-HSC_161 HSPC_599 HSPC_606 HSPC_612
#> "02112" "0322" "042" "042" "042" "023" "022" "0312" "0311"
#> HSPC_618 HSPC_624 HSPC_630 HSPC_636 LT-HSC_162 HSPC_600 Prog_601 Prog_607 Prog_613
#> "022" "0322" "022" "0311" "023" "023" "02112" "01213" "0331"
#> Prog_619 Prog_625 Prog_631 LT-HSC_163 Prog_595 Prog_602 Prog_608 Prog_614 Prog_620
#> "022" "0413" "0322" "022" "022" "0132" "01122" "0132" "042"
#> Prog_626 Prog_632 LT-HSC_164 Prog_596 Prog_603 Prog_609 Prog_615 Prog_621 Prog_627
#> "01211" "01222" "0312" "0332" "01122" "01212" "0411" "01212" "0311"
#> Prog_633 LT-HSC_165 Prog_597 Prog_604 Prog_610 Prog_616 Prog_622 Prog_628 Prog_634
#> "043" "022" "0331" "0331" "0331" "01112" "01213" "01212" "043"
#> LT-HSC_166 Prog_598 Prog_605 Prog_611 Prog_617 Prog_623 Prog_629 Prog_635 LT-HSC_167
#> "042" "01212" "0141" "0331" "0311" "0132" "01221" "0331" "022"
#> Prog_599 Prog_606 Prog_612 Prog_618 Prog_624 Prog_630 Prog_636 LT-HSC_168 Prog_600
#> "01222" "0312" "01311" "01222" "01222" "01312" "0213" "01311" "01222"
#> HSPC_643 HSPC_649 HSPC_655 HSPC_661 HSPC_667 HSPC_673 LT-HSC_169 HSPC_637 HSPC_644
#> "042" "0322" "02121" "042" "022" "022" "023" "0312" "0132"
#> HSPC_650 HSPC_656 HSPC_662 HSPC_668 HSPC_674 LT-HSC_170 HSPC_638 HSPC_645 HSPC_651
#> "02112" "022" "022" "0321" "0311" "042" "0132" "0322" "0411"
#> HSPC_657 HSPC_663 HSPC_669 HSPC_675 LT-HSC_171 HSPC_639 HSPC_646 HSPC_652 HSPC_658
#> "023" "0412" "022" "02121" "042" "0312" "0312" "042" "0412"
#> HSPC_664 HSPC_670 HSPC_676 LT-HSC_172 HSPC_640 HSPC_647 HSPC_653 HSPC_659 HSPC_665
#> "0322" "023" "022" "022" "0312" "022" "02111" "02112" "042"
#> HSPC_671 HSPC_677 LT-HSC_173 HSPC_641 HSPC_648 HSPC_654 HSPC_660 HSPC_666 HSPC_672
#> "0321" "023" "022" "0312" "022" "042" "043" "0413" "0321"
#> HSPC_678 LT-HSC_174 HSPC_642 Prog_643 Prog_649 Prog_655 Prog_661 Prog_667 Prog_673
#> "022" "0312" "02112" "0412" "01121" "01121" "01312" "043" "042"
#> LT-HSC_175 Prog_637 Prog_644 Prog_650 Prog_656 Prog_662 Prog_668 Prog_674 LT-HSC_176
#> "02111" "0141" "0332" "01212" "0332" "0332" "023" "0332" "022"
#> Prog_638 Prog_645 Prog_651 Prog_657 Prog_663 Prog_669 Prog_675 LT-HSC_177 Prog_639
#> "01122" "043" "0312" "01112" "01122" "023" "01223" "022" "0142"
#> Prog_646 Prog_652 Prog_658 Prog_664 Prog_670 Prog_676 LT-HSC_178 Prog_640 Prog_647
#> "01223" "01222" "01213" "023" "01211" "0331" "02112" "01113" "043"
#> Prog_653 Prog_659 Prog_665 Prog_671 Prog_677 LT-HSC_179 Prog_641 Prog_648 Prog_654
#> "043" "0332" "0311" "0312" "01121" "0312" "023" "042" "0132"
#> Prog_660 Prog_666 Prog_672 Prog_678 LT-HSC_180 Prog_642 HSPC_685 HSPC_691 HSPC_697
#> "0312" "0332" "0312" "0411" "043" "0322" "0213" "02121" "0413"
#> HSPC_703 HSPC_709 HSPC_715 LT-HSC_181 HSPC_679 HSPC_686 HSPC_692 HSPC_698 HSPC_704
#> "022" "023" "02122" "02121" "0312" "02112" "023" "022" "022"
#> HSPC_710 HSPC_716 LT-HSC_182 HSPC_680 HSPC_687 HSPC_693 HSPC_699 HSPC_705 HSPC_711
#> "02111" "022" "0213" "022" "023" "023" "022" "01213" "02111"
#> HSPC_717 LT-HSC_183 HSPC_681 HSPC_688 HSPC_694 HSPC_700 HSPC_706 HSPC_712 HSPC_718
#> "0412" "0312" "042" "02111" "02111" "0413" "0332" "02111" "02111"
#> LT-HSC_184 HSPC_682 HSPC_689 HSPC_695 HSPC_701 HSPC_707 HSPC_713 HSPC_719 LT-HSC_185
#> "0311" "01213" "022" "0132" "042" "042" "02121" "022" "023"
#> HSPC_683 HSPC_690 HSPC_696 HSPC_702 HSPC_708 HSPC_714 HSPC_720 LT-HSC_186 HSPC_684
#> "0412" "022" "043" "022" "0311" "022" "01213" "02111" "023"
#> Prog_685 Prog_691 Prog_697 Prog_703 Prog_709 Prog_715 LT-HSC_187 Prog_679 Prog_686
#> "01211" "0213" "01122" "043" "0141" "01212" "0312" "01223" "0413"
#> Prog_692 Prog_698 Prog_704 Prog_710 Prog_716 LT-HSC_188 Prog_680 Prog_687 Prog_693
#> "0321" "01312" "0311" "0311" "0331" "0312" "01221" "01212" "01221"
#> Prog_699 Prog_705 Prog_711 Prog_717 LT-HSC_189 Prog_681 Prog_688 Prog_694 Prog_700
#> "01213" "01213" "0331" "01212" "02111" "01312" "01122" "0332" "01112"
#> Prog_706 Prog_712 Prog_718 LT-HSC_190 Prog_682 Prog_689 Prog_695 Prog_701 Prog_707
#> "01311" "0132" "01222" "023" "0132" "0332" "01111" "01112" "0332"
#> Prog_713 Prog_719 LT-HSC_191 Prog_683 Prog_690 Prog_696 Prog_702 Prog_708 Prog_714
#> "01311" "01121" "0312" "023" "0332" "0411" "0142" "0141" "0141"
#> Prog_720 LT-HSC_192 Prog_684 HSPC_727 HSPC_733 HSPC_739 HSPC_745 HSPC_751 HSPC_757
#> "0141" "01221" "0321" "022" "022" "023" "023" "022" "022"
#> LT-HSC_193 HSPC_721 HSPC_728 HSPC_734 HSPC_740 HSPC_746 HSPC_752 HSPC_758 LT-HSC_194
#> "022" "023" "0213" "01213" "022" "023" "023" "0322" "022"
#> HSPC_722 HSPC_729 HSPC_735 HSPC_741 HSPC_747 HSPC_753 HSPC_759 LT-HSC_195 HSPC_723
#> "0312" "0312" "042" "02112" "022" "0312" "0321" "0322" "0322"
#> HSPC_730 HSPC_736 HSPC_742 HSPC_748 HSPC_754 HSPC_760 LT-HSC_196 HSPC_724 HSPC_731
#> "0311" "0322" "0322" "022" "0213" "042" "02111" "0322" "0412"
#> HSPC_737 HSPC_743 HSPC_749 HSPC_755 HSPC_761 LT-HSC_197 HSPC_725 HSPC_732 HSPC_738
#> "01212" "0311" "022" "0312" "0322" "022" "023" "0322" "022"
#> HSPC_744 HSPC_750 HSPC_756 HSPC_762 LT-HSC_198 HSPC_726 Prog_727 Prog_733 Prog_739
#> "042" "0311" "022" "042" "022" "0213" "01213" "0331" "0412"
#> Prog_745 Prog_751 Prog_757 LT-HSC_199 Prog_721 Prog_728 Prog_734 Prog_740 Prog_746
#> "0332" "0332" "0412" "02112" "0141" "0321" "0142" "0332" "0411"
#> Prog_752 Prog_758 LT-HSC_200 Prog_722 Prog_729 Prog_735 Prog_741 Prog_747 Prog_753
#> "0331" "0331" "022" "0142" "023" "01213" "0213" "0332" "01311"
#> Prog_759 LT-HSC_201 Prog_723 Prog_730 Prog_736 Prog_742 Prog_748 Prog_754 Prog_760
#> "01212" "022" "01122" "01121" "01311" "0213" "0413" "01312" "01222"
#> LT-HSC_202 Prog_724 Prog_731 Prog_737 Prog_743 Prog_749 Prog_755 Prog_761 LT-HSC_203
#> "0312" "0332" "01121" "0312" "01213" "043" "0213" "0412" "0213"
#> Prog_725 Prog_732 Prog_738 Prog_744 Prog_750 Prog_756 Prog_762 LT-HSC_204 Prog_726
#> "0311" "043" "0332" "0332" "0413" "043" "0311" "0322" "0311"
#> HSPC_769 HSPC_775 HSPC_781 HSPC_787 HSPC_793 HSPC_799 LT-HSC_205 HSPC_763 HSPC_770
#> "023" "023" "022" "023" "02121" "023" "023" "02121" "042"
#> HSPC_776 HSPC_782 HSPC_788 HSPC_794 HSPC_800 LT-HSC_206 HSPC_764 HSPC_771 HSPC_777
#> "023" "022" "023" "0321" "0413" "022" "022" "0321" "0321"
#> HSPC_783 HSPC_789 HSPC_795 HSPC_801 LT-HSC_207 HSPC_765 HSPC_772 HSPC_778 HSPC_784
#> "022" "042" "0322" "0311" "042" "023" "042" "0312" "0312"
#> HSPC_790 HSPC_796 HSPC_802 LT-HSC_208 HSPC_766 HSPC_773 HSPC_779 HSPC_785 HSPC_791
#> "042" "01212" "022" "022" "01221" "0322" "042" "0311" "043"
#> HSPC_797 HSPC_803 LT-HSC_209 HSPC_767 HSPC_774 HSPC_780 HSPC_786 HSPC_792 HSPC_798
#> "0321" "022" "02112" "01221" "0321" "0311" "0311" "0213" "022"
#> HSPC_804 LT-HSC_210 HSPC_768 Prog_769 Prog_775 Prog_781 Prog_787 Prog_793 Prog_799
#> "022" "022" "023" "01223" "0332" "01223" "043" "0132" "0332"
#> LT-HSC_211 Prog_763 Prog_770 Prog_776 Prog_782 Prog_788 Prog_794 Prog_800 LT-HSC_212
#> "042" "01221" "0142" "01121" "01221" "01122" "01222" "01223" "0312"
#> Prog_764 Prog_771 Prog_777 Prog_783 Prog_789 Prog_795 Prog_801 LT-HSC_213 Prog_765
#> "01223" "0142" "01211" "0141" "01211" "01211" "0132" "022" "01311"
#> Prog_772 Prog_778 Prog_784 Prog_790 Prog_796 Prog_802 LT-HSC_214 Prog_766 Prog_773
#> "01223" "023" "0321" "01121" "0412" "0141" "0311" "02122" "02122"
#> Prog_779 Prog_785 Prog_791 Prog_797 Prog_803 LT-HSC_215 Prog_767 Prog_774 Prog_780
#> "01311" "0332" "01211" "0311" "043" "0322" "01113" "01212" "01113"
#> Prog_786 Prog_792 Prog_798 Prog_804 LT-HSC_216 Prog_768 HSPC_811 HSPC_817 HSPC_823
#> "01113" "01312" "01311" "01212" "0411" "01221" "02122" "02122" "02121"
#> HSPC_829 HSPC_835 HSPC_841 HSPC_847 HSPC_805 HSPC_812 HSPC_818 HSPC_824 HSPC_830
#> "0213" "0321" "043" "023" "02122" "01221" "0312" "0311" "02121"
#> HSPC_836 HSPC_842 HSPC_848 HSPC_806 HSPC_813 HSPC_819 HSPC_825 HSPC_831 HSPC_837
#> "023" "023" "022" "023" "01221" "042" "0311" "0311" "0412"
#> HSPC_843 HSPC_849 HSPC_807 HSPC_814 HSPC_820 HSPC_826 HSPC_832 HSPC_838 HSPC_844
#> "0311" "022" "01212" "0413" "01221" "0311" "0321" "0321" "022"
#> HSPC_850 HSPC_808 HSPC_815 HSPC_821 HSPC_827 HSPC_833 HSPC_839 HSPC_845 HSPC_851
#> "02111" "01221" "0321" "042" "022" "01221" "0413" "0311" "023"
#> HSPC_809 HSPC_816 HSPC_822 HSPC_828 HSPC_834 HSPC_840 HSPC_846 HSPC_852 HSPC_810
#> "022" "042" "0312" "0321" "0322" "022" "042" "022" "022"
#> Prog_811 Prog_817 Prog_823 Prog_829 Prog_835 Prog_841 Prog_847 Prog_805 Prog_812
#> "0142" "0132" "0311" "01212" "0141" "0411" "01223" "042" "023"
#> Prog_818 Prog_824 Prog_830 Prog_836 Prog_842 Prog_848 Prog_806 Prog_813 Prog_819
#> "0142" "01223" "01122" "01311" "0141" "022" "0332" "01121" "01121"
#> Prog_825 Prog_831 Prog_837 Prog_843 Prog_849 Prog_807 Prog_814 Prog_820 Prog_826
#> "01113" "0141" "0141" "01312" "042" "0141" "01121" "0132" "01122"
#> Prog_832 Prog_838 Prog_844 Prog_850 Prog_808 Prog_815 Prog_821 Prog_827 Prog_833
#> "01211" "01121" "0141" "0142" "01212" "0141" "01113" "0331" "01221"
#> Prog_839 Prog_845 Prog_851 Prog_809 Prog_816 Prog_822 Prog_828 Prog_834 Prog_840
#> "01311" "01311" "0332" "0132" "01223" "01113" "01113" "01212" "01212"
#> Prog_846 Prog_852 Prog_810
#> "01211" "0411" "01311"
get_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 741))
#> HSPC_007 HSPC_013 HSPC_019 HSPC_025 HSPC_031 HSPC_037 LT-HSC_001 HSPC_001 HSPC_008
#> "0213" "023" "02112" "042" "0322" "042" "023" "01221" "042"
#> HSPC_014 HSPC_020 HSPC_026 HSPC_032 HSPC_038 LT-HSC_002 HSPC_002 HSPC_009 HSPC_015
#> "022" "042" "0412" "02111" "022" "042" "022" "022" "023"
#> HSPC_021 HSPC_027 HSPC_033 HSPC_039 LT-HSC_003 HSPC_003 HSPC_010 HSPC_016 HSPC_022
#> "022" "033" "0311" "02112" "023" "01213" "0213" "01221" "0412"
#> HSPC_028 HSPC_034 HSPC_040 LT-HSC_004 HSPC_004 HSPC_011 HSPC_017 HSPC_023 HSPC_029
#> "0312" "01213" "0321" "022" "0311" "042" "022" "042" "02112"
#> HSPC_035 HSPC_041 LT-HSC_005 HSPC_005 HSPC_012 HSPC_018 HSPC_024 HSPC_030 HSPC_036
#> "022" "042" "02112" "02112" "042" "042" "022" "0311" "01212"
#> HSPC_042 LT-HSC_006 HSPC_006 Prog_007 Prog_013 Prog_019 Prog_025 Prog_031 Prog_037
#> "0322" "022" "0412" "01223" "01212" "01312" "0411" "033" "033"
#> LT-HSC_007 Prog_001 Prog_008 Prog_014 Prog_020 Prog_026 Prog_032 Prog_038 LT-HSC_008
#> "042" "043" "01112" "01121" "0142" "033" "0141" "0141" "0312"
#> Prog_002 Prog_009 Prog_015 Prog_021 Prog_027 Prog_033 Prog_039 LT-HSC_009 Prog_003
#> "01213" "01112" "01212" "0141" "01222" "01121" "01112" "022" "01222"
#> Prog_010 Prog_016 Prog_022 Prog_028 Prog_034 Prog_040 LT-HSC_010 Prog_004 Prog_011
#> "0412" "0411" "0411" "01122" "02112" "042" "0412" "033" "0142"
#> Prog_017 Prog_023 Prog_029 Prog_035 Prog_041 LT-HSC_011 Prog_005 Prog_012 Prog_018
#> "01211" "01222" "0142" "01111" "0213" "0213" "0213" "022" "022"
#> Prog_024 Prog_030 Prog_036 Prog_042 LT-HSC_012 Prog_006 HSPC_049 HSPC_055 HSPC_061
#> "0142" "0411" "0412" "0411" "0411" "01111" "0311" "042" "042"
#> HSPC_067 HSPC_073 HSPC_079 LT-HSC_013 HSPC_043 HSPC_050 HSPC_056 HSPC_062 HSPC_068
#> "042" "022" "0412" "022" "042" "043" "022" "0413" "022"
#> HSPC_074 HSPC_080 LT-HSC_014 HSPC_044 HSPC_051 HSPC_057 HSPC_063 HSPC_069 HSPC_075
#> "022" "0321" "022" "043" "0322" "022" "0412" "0321" "022"
#> HSPC_081 LT-HSC_015 HSPC_045 HSPC_052 HSPC_058 HSPC_064 HSPC_070 HSPC_076 HSPC_082
#> "0321" "022" "042" "043" "0311" "0413" "033" "0321" "042"
#> LT-HSC_016 HSPC_046 HSPC_053 HSPC_059 HSPC_065 HSPC_071 HSPC_077 HSPC_083 LT-HSC_017
#> "022" "0322" "01212" "02112" "0321" "0413" "01212" "022" "022"
#> HSPC_047 HSPC_054 HSPC_060 HSPC_066 HSPC_072 HSPC_078 HSPC_084 LT-HSC_018 HSPC_048
#> "023" "0312" "0311" "0311" "0413" "043" "042" "022" "0322"
#> Prog_049 Prog_055 Prog_061 Prog_067 Prog_073 Prog_079 LT-HSC_019 Prog_043 Prog_050
#> "01112" "01211" "01121" "0142" "0321" "01112" "02112" "0132" "01211"
#> Prog_056 Prog_062 Prog_068 Prog_074 Prog_080 LT-HSC_020 Prog_044 Prog_051 Prog_057
#> "01222" "042" "0321" "0411" "043" "0311" "0321" "0141" "01312"
#> Prog_063 Prog_069 Prog_075 Prog_081 LT-HSC_021 Prog_045 Prog_052 Prog_058 Prog_064
#> "043" "01222" "01211" "01112" "0413" "0132" "043" "0142" "0141"
#> Prog_070 Prog_076 Prog_082 LT-HSC_022 Prog_046 Prog_053 Prog_059 Prog_065 Prog_071
#> "0412" "0141" "01111" "022" "01122" "01121" "01222" "01312" "01223"
#> Prog_077 Prog_083 LT-HSC_023 Prog_047 Prog_054 Prog_060 Prog_066 Prog_072 Prog_078
#> "01222" "01212" "022" "01211" "0411" "0213" "0142" "033" "0142"
#> Prog_084 LT-HSC_024 Prog_048 HSPC_091 HSPC_097 HSPC_103 HSPC_109 HSPC_115 HSPC_121
#> "01121" "033" "0321" "02122" "023" "022" "043" "022" "023"
#> LT-HSC_025 HSPC_085 HSPC_092 HSPC_098 HSPC_104 HSPC_110 HSPC_116 HSPC_122 LT-HSC_026
#> "02121" "042" "02121" "043" "023" "043" "02111" "0311" "022"
#> HSPC_086 HSPC_093 HSPC_099 HSPC_105 HSPC_111 HSPC_117 HSPC_123 LT-HSC_027 HSPC_087
#> "02112" "02112" "042" "022" "022" "042" "022" "023" "022"
#> HSPC_094 HSPC_100 HSPC_106 HSPC_112 HSPC_118 HSPC_124 LT-HSC_028 HSPC_088 HSPC_095
#> "01221" "0321" "022" "02111" "0311" "02111" "0321" "0321" "022"
#> HSPC_101 HSPC_107 HSPC_113 HSPC_119 HSPC_125 LT-HSC_029 HSPC_089 HSPC_096 HSPC_102
#> "01213" "042" "023" "023" "0311" "02122" "0321" "043" "01211"
#> HSPC_108 HSPC_114 HSPC_120 HSPC_126 LT-HSC_030 HSPC_090 Prog_091 Prog_097 Prog_103
#> "0311" "0322" "0312" "0322" "02121" "01221" "01111" "01211" "01221"
#> Prog_109 Prog_115 Prog_121 LT-HSC_031 Prog_085 Prog_092 Prog_098 Prog_104 Prog_110
#> "0412" "0142" "0213" "0321" "01222" "033" "01121" "02111" "01112"
#> Prog_116 Prog_122 LT-HSC_032 Prog_086 Prog_093 Prog_099 Prog_105 Prog_111 Prog_117
#> "01221" "033" "01111" "02122" "01223" "01222" "01211" "0142" "0132"
#> Prog_123 LT-HSC_033 Prog_087 Prog_094 Prog_100 Prog_106 Prog_112 Prog_118 Prog_124
#> "01211" "0312" "01211" "0141" "01121" "0311" "01112" "0412" "033"
#> LT-HSC_034 Prog_088 Prog_095 Prog_101 Prog_107 Prog_113 Prog_119 Prog_125 LT-HSC_035
#> "0312" "043" "01122" "01312" "01112" "01223" "01111" "0311" "02122"
#> Prog_089 Prog_096 Prog_102 Prog_108 Prog_114 Prog_120 Prog_126 LT-HSC_036 Prog_090
#> "0142" "0322" "0311" "0411" "0413" "023" "0141" "033" "01121"
#> HSPC_133 HSPC_139 HSPC_145 HSPC_151 HSPC_157 HSPC_163 LT-HSC_037 HSPC_127 HSPC_134
#> "022" "022" "023" "042" "043" "023" "023" "0412" "023"
#> HSPC_140 HSPC_146 HSPC_152 HSPC_158 HSPC_164 LT-HSC_038 HSPC_128 HSPC_135 HSPC_141
#> "023" "0412" "022" "042" "022" "023" "023" "0312" "022"
#> HSPC_147 HSPC_153 HSPC_159 HSPC_165 LT-HSC_039 HSPC_129 HSPC_136 HSPC_142 HSPC_148
#> "023" "022" "042" "043" "022" "02111" "042" "042" "043"
#> HSPC_154 HSPC_160 HSPC_166 LT-HSC_040 HSPC_130 HSPC_137 HSPC_143 HSPC_149 HSPC_155
#> "043" "02112" "042" "022" "042" "02111" "022" "022" "023"
#> HSPC_161 HSPC_167 LT-HSC_041 HSPC_131 HSPC_138 HSPC_144 HSPC_150 HSPC_156 HSPC_162
#> "042" "023" "022" "022" "01221" "0312" "02111" "01221" "0322"
#> HSPC_168 LT-HSC_042 HSPC_132 Prog_133 Prog_139 Prog_145 Prog_151 Prog_157 Prog_163
#> "0413" "022" "0132" "01211" "01121" "01213" "0321" "01222" "01113"
#> LT-HSC_043 Prog_127 Prog_134 Prog_140 Prog_146 Prog_152 Prog_158 Prog_164 LT-HSC_044
#> "0132" "0321" "043" "01111" "01113" "043" "01112" "0213" "043"
#> Prog_128 Prog_135 Prog_141 Prog_147 Prog_153 Prog_159 Prog_165 LT-HSC_045 Prog_129
#> "01211" "0322" "0132" "02112" "01222" "0412" "043" "0412" "01311"
#> Prog_136 Prog_142 Prog_148 Prog_154 Prog_160 Prog_166 LT-HSC_046 Prog_130 Prog_137
#> "0132" "033" "023" "033" "022" "0141" "0312" "01312" "01222"
#> Prog_143 Prog_149 Prog_155 Prog_161 Prog_167 LT-HSC_047 Prog_131 Prog_138 Prog_144
#> "01312" "0413" "01211" "033" "01212" "0213" "033" "02111" "043"
#> Prog_150 Prog_156 Prog_162 Prog_168 LT-HSC_048 Prog_132 HSPC_175 HSPC_181 HSPC_187
#> "01312" "02122" "0412" "01312" "023" "01312" "042" "022" "022"
#> HSPC_193 HSPC_199 HSPC_205 LT-HSC_049 HSPC_169 HSPC_176 HSPC_182 HSPC_188 HSPC_194
#> "033" "0312" "022" "022" "042" "022" "023" "02111" "02112"
#> HSPC_200 HSPC_206 LT-HSC_050 HSPC_170 HSPC_177 HSPC_183 HSPC_189 HSPC_195 HSPC_201
#> "022" "01223" "022" "023" "022" "033" "0311" "01213" "02112"
#> HSPC_207 LT-HSC_051 HSPC_171 HSPC_178 HSPC_184 HSPC_190 HSPC_196 HSPC_202 HSPC_208
#> "0321" "022" "022" "0311" "02121" "0413" "042" "0322" "022"
#> LT-HSC_052 HSPC_172 HSPC_179 HSPC_185 HSPC_191 HSPC_197 HSPC_203 HSPC_209 LT-HSC_053
#> "01221" "01221" "01221" "023" "022" "02112" "042" "02112" "02112"
#> HSPC_173 HSPC_180 HSPC_186 HSPC_192 HSPC_198 HSPC_204 HSPC_210 LT-HSC_054 HSPC_174
#> "023" "043" "033" "022" "0312" "0412" "043" "022" "0311"
#> Prog_175 Prog_181 Prog_187 Prog_193 Prog_199 Prog_205 LT-HSC_055 Prog_169 Prog_176
#> "0411" "02112" "033" "042" "0321" "0413" "0132" "02112" "01221"
#> Prog_182 Prog_188 Prog_194 Prog_200 Prog_206 LT-HSC_056 Prog_170 Prog_177 Prog_183
#> "043" "0141" "023" "043" "01222" "01312" "01112" "042" "0132"
#> Prog_189 Prog_195 Prog_201 Prog_207 LT-HSC_057 Prog_171 Prog_178 Prog_184 Prog_190
#> "01222" "042" "0412" "0142" "0312" "042" "01121" "01312" "01211"
#> Prog_196 Prog_202 Prog_208 LT-HSC_058 Prog_172 Prog_179 Prog_185 Prog_191 Prog_197
#> "01111" "0213" "033" "0322" "0141" "01311" "01111" "033" "01312"
#> Prog_203 Prog_209 LT-HSC_059 Prog_173 Prog_180 Prog_186 Prog_192 Prog_198 Prog_204
#> "0132" "01311" "02122" "043" "0322" "01223" "01211" "02112" "023"
#> Prog_210 LT-HSC_060 Prog_174 HSPC_217 HSPC_223 HSPC_229 HSPC_235 HSPC_241 HSPC_247
#> "0322" "01311" "0213" "02122" "022" "023" "022" "02112" "023"
#> LT-HSC_061 HSPC_211 HSPC_218 HSPC_224 HSPC_230 HSPC_236 HSPC_242 HSPC_248 LT-HSC_062
#> "02121" "042" "022" "022" "042" "043" "023" "022" "023"
#> HSPC_212 HSPC_219 HSPC_225 HSPC_231 HSPC_237 HSPC_243 HSPC_249 LT-HSC_063 HSPC_213
#> "023" "042" "022" "023" "022" "0412" "022" "033" "0413"
#> HSPC_220 HSPC_226 HSPC_232 HSPC_238 HSPC_244 HSPC_250 LT-HSC_064 HSPC_214 HSPC_221
#> "022" "02112" "023" "02122" "0322" "0413" "01121" "01213" "0312"
#> HSPC_227 HSPC_233 HSPC_239 HSPC_245 HSPC_251 LT-HSC_065 HSPC_215 HSPC_222 HSPC_228
#> "022" "042" "022" "022" "0413" "0312" "0412" "042" "023"
#> HSPC_234 HSPC_240 HSPC_246 HSPC_252 LT-HSC_066 HSPC_216 Prog_217 Prog_223 Prog_229
#> "02112" "0312" "022" "0213" "0312" "01213" "01111" "042" "01112"
#> Prog_235 Prog_241 Prog_247 LT-HSC_067 Prog_211 Prog_218 Prog_224 Prog_230 Prog_236
#> "023" "022" "033" "0213" "01121" "01222" "0132" "0413" "01213"
#> Prog_242 Prog_248 LT-HSC_068 Prog_212 Prog_219 Prog_225 Prog_231 Prog_237 Prog_243
#> "0142" "043" "01221" "0141" "0213" "033" "0132" "042" "01312"
#> Prog_249 LT-HSC_069 Prog_213 Prog_220 Prog_226 Prog_232 Prog_238 Prog_244 Prog_250
#> "01111" "0322" "043" "0213" "0311" "033" "01211" "0321" "0141"
#> LT-HSC_070 Prog_214 Prog_221 Prog_227 Prog_233 Prog_239 Prog_245 Prog_251 LT-HSC_071
#> "043" "0413" "01111" "0132" "01222" "01111" "01211" "02122" "0322"
#> Prog_215 Prog_222 Prog_228 Prog_234 Prog_240 Prog_246 Prog_252 LT-HSC_072 Prog_216
#> "01113" "0322" "01311" "01212" "01221" "033" "0322" "01211" "01113"
#> HSPC_259 HSPC_265 HSPC_271 HSPC_277 HSPC_283 HSPC_289 LT-HSC_073 HSPC_253 HSPC_260
#> "023" "022" "0412" "023" "022" "022" "023" "0413" "02112"
#> HSPC_266 HSPC_272 HSPC_278 HSPC_284 HSPC_290 LT-HSC_074 HSPC_254 HSPC_261 HSPC_267
#> "022" "02112" "042" "02112" "0413" "022" "022" "0132" "0311"
#> HSPC_273 HSPC_279 HSPC_285 HSPC_291 LT-HSC_075 HSPC_255 HSPC_262 HSPC_268 HSPC_274
#> "02112" "043" "01213" "033" "0312" "0322" "02121" "01212" "022"
#> HSPC_280 HSPC_286 HSPC_292 LT-HSC_076 HSPC_256 HSPC_263 HSPC_269 HSPC_275 HSPC_281
#> "0412" "042" "0412" "042" "01121" "0412" "0132" "01312" "023"
#> HSPC_287 HSPC_293 LT-HSC_077 HSPC_257 HSPC_264 HSPC_270 HSPC_276 HSPC_282 HSPC_288
#> "0413" "0412" "023" "0413" "022" "0321" "0321" "01212" "01212"
#> HSPC_294 LT-HSC_078 HSPC_258 Prog_259 Prog_265 Prog_271 Prog_277 Prog_283 Prog_289
#> "0413" "022" "01222" "0312" "01121" "033" "0312" "042" "0412"
#> LT-HSC_079 Prog_253 Prog_260 Prog_266 Prog_272 Prog_278 Prog_284 Prog_290 LT-HSC_080
#> "02112" "0142" "01223" "01221" "01223" "01121" "0142" "01122" "0321"
#> Prog_254 Prog_261 Prog_267 Prog_273 Prog_279 Prog_285 Prog_291 LT-HSC_081 Prog_255
#> "01121" "0141" "01311" "01312" "01112" "0141" "0411" "01221" "01211"
#> Prog_262 Prog_268 Prog_274 Prog_280 Prog_286 Prog_292 LT-HSC_082 Prog_256 Prog_263
#> "01223" "01223" "0141" "033" "01121" "01222" "0322" "042" "01311"
#> Prog_269 Prog_275 Prog_281 Prog_287 Prog_293 LT-HSC_083 Prog_257 Prog_264 Prog_270
#> "01122" "01223" "0142" "01312" "033" "02121" "0213" "023" "01311"
#> Prog_276 Prog_282 Prog_288 Prog_294 LT-HSC_084 Prog_258 HSPC_301 HSPC_307 HSPC_313
#> "01212" "01113" "01122" "01222" "033" "0132" "023" "022" "042"
#> HSPC_319 HSPC_325 HSPC_331 LT-HSC_085 HSPC_295 HSPC_302 HSPC_308 HSPC_314 HSPC_320
#> "02122" "022" "022" "022" "0413" "023" "043" "042" "043"
#> HSPC_326 HSPC_332 LT-HSC_086 HSPC_296 HSPC_303 HSPC_309 HSPC_315 HSPC_321 HSPC_327
#> "022" "01211" "042" "022" "01221" "022" "022" "042" "01212"
#> HSPC_333 LT-HSC_087 HSPC_297 HSPC_304 HSPC_310 HSPC_316 HSPC_322 HSPC_328 HSPC_334
#> "01213" "02122" "022" "0322" "022" "023" "0312" "042" "022"
#> LT-HSC_088 HSPC_298 HSPC_305 HSPC_311 HSPC_317 HSPC_323 HSPC_329 HSPC_335 LT-HSC_089
#> "043" "0322" "0412" "02122" "023" "0311" "042" "022" "022"
#> HSPC_299 HSPC_306 HSPC_312 HSPC_318 HSPC_324 HSPC_330 HSPC_336 LT-HSC_090 HSPC_300
#> "033" "033" "0413" "022" "0312" "0311" "022" "0322" "01221"
#> Prog_301 Prog_307 Prog_313 Prog_319 Prog_325 Prog_331 LT-HSC_091 Prog_295 Prog_302
#> "0411" "0412" "0413" "0132" "01211" "01212" "01111" "0412" "02122"
#> Prog_308 Prog_314 Prog_320 Prog_326 Prog_332 LT-HSC_092 Prog_296 Prog_303 Prog_309
#> "01223" "033" "01221" "01111" "01222" "02122" "01222" "022" "022"
#> Prog_315 Prog_321 Prog_327 Prog_333 LT-HSC_093 Prog_297 Prog_304 Prog_310 Prog_316
#> "0411" "0411" "01211" "043" "042" "043" "01211" "0412" "0411"
#> Prog_322 Prog_328 Prog_334 LT-HSC_094 Prog_298 Prog_305 Prog_311 Prog_317 Prog_323
#> "043" "0411" "0142" "042" "0142" "0413" "043" "02122" "0411"
#> Prog_329 Prog_335 LT-HSC_095 Prog_299 Prog_306 Prog_312 Prog_318 Prog_324 Prog_330
#> "0411" "0413" "01112" "01121" "022" "01111" "01111" "01122" "0132"
#> Prog_336 LT-HSC_096 Prog_300 HSPC_343 HSPC_349 HSPC_355 HSPC_361 HSPC_367 HSPC_373
#> "0132" "01212" "01311" "0132" "0311" "0213" "023" "022" "023"
#> LT-HSC_097 HSPC_337 HSPC_344 HSPC_350 HSPC_356 HSPC_362 HSPC_368 HSPC_374 LT-HSC_098
#> "02121" "022" "0412" "022" "043" "0411" "042" "0321" "01122"
#> HSPC_338 HSPC_345 HSPC_351 HSPC_357 HSPC_363 HSPC_369 HSPC_375 LT-HSC_099 HSPC_339
#> "01112" "043" "043" "02111" "022" "02111" "02111" "023" "0321"
#> HSPC_346 HSPC_352 HSPC_358 HSPC_364 HSPC_370 HSPC_376 LT-HSC_100 HSPC_340 HSPC_347
#> "01213" "0412" "042" "042" "01312" "042" "01112" "0213" "02112"
#> HSPC_353 HSPC_359 HSPC_365 HSPC_371 HSPC_377 LT-HSC_101 HSPC_341 HSPC_348 HSPC_354
#> "01212" "0321" "023" "01212" "0413" "0411" "01221" "033" "022"
#> HSPC_360 HSPC_366 HSPC_372 HSPC_378 LT-HSC_102 HSPC_342 Prog_343 Prog_349 Prog_355
#> "042" "0213" "042" "02121" "01112" "01311" "0132" "0411" "0413"
#> Prog_361 Prog_367 Prog_373 LT-HSC_103 Prog_337 Prog_344 Prog_350 Prog_356 Prog_362
#> "0141" "01312" "01113" "0132" "01111" "02112" "0141" "01121" "0412"
#> Prog_368 Prog_374 LT-HSC_104 Prog_338 Prog_345 Prog_351 Prog_357 Prog_363 Prog_369
#> "0142" "0141" "02122" "01221" "0411" "0142" "01112" "0141" "0411"
#> Prog_375 LT-HSC_105 Prog_339 Prog_346 Prog_352 Prog_358 Prog_364 Prog_370 Prog_376
#> "01112" "0411" "01122" "0141" "01112" "0311" "01122" "0411" "01121"
#> LT-HSC_106 Prog_340 Prog_347 Prog_353 Prog_359 Prog_365 Prog_371 Prog_377 LT-HSC_107
#> "0412" "0142" "0213" "0132" "01122" "0213" "01212" "01111" "023"
#> Prog_341 Prog_348 Prog_354 Prog_360 Prog_366 Prog_372 Prog_378 LT-HSC_108 Prog_342
#> "01212" "02121" "0412" "01112" "0142" "01121" "0322" "01211" "01112"
#> HSPC_385 HSPC_391 HSPC_397 HSPC_403 HSPC_409 HSPC_415 HSPC_421 HSPC_379 HSPC_386
#> "02111" "0311" "02111" "042" "023" "023" "043" "02121" "042"
#> HSPC_392 HSPC_398 HSPC_404 HSPC_410 HSPC_416 HSPC_422 HSPC_380 HSPC_387 HSPC_393
#> "0321" "0321" "01121" "01212" "0311" "0321" "0321" "0412" "0411"
#> HSPC_399 HSPC_405 HSPC_411 HSPC_417 HSPC_423 HSPC_381 HSPC_388 HSPC_394 HSPC_400
#> "0311" "0321" "01212" "01221" "01221" "02112" "01221" "02111" "0412"
#> HSPC_406 HSPC_412 HSPC_418 HSPC_424 HSPC_382 HSPC_389 HSPC_395 HSPC_401 HSPC_407
#> "042" "01312" "0311" "0413" "01221" "0141" "043" "02111" "01311"
#> HSPC_413 HSPC_419 HSPC_425 HSPC_383 HSPC_390 HSPC_396 HSPC_402 HSPC_408 HSPC_414
#> "042" "01312" "0413" "022" "042" "0321" "0321" "01111" "02112"
#> HSPC_420 HSPC_426 HSPC_384 Prog_385 Prog_391 Prog_397 Prog_403 Prog_409 Prog_415
#> "01221" "042" "02112" "01111" "0213" "01112" "01121" "01112" "01112"
#> Prog_421 Prog_379 Prog_386 Prog_392 Prog_398 Prog_404 Prog_410 Prog_416 Prog_422
#> "01112" "01122" "01112" "01222" "01112" "01113" "01121" "01121" "0413"
#> Prog_380 Prog_387 Prog_393 Prog_399 Prog_405 Prog_411 Prog_417 Prog_423 Prog_381
#> "01122" "01311" "01121" "01223" "01223" "042" "0411" "0412" "01122"
#> Prog_388 Prog_394 Prog_400 Prog_406 Prog_412 Prog_418 Prog_424 Prog_382 Prog_389
#> "01112" "033" "02111" "01121" "01213" "0141" "01121" "0311" "0132"
#> Prog_395 Prog_401 Prog_407 Prog_413 Prog_419 Prog_425 Prog_383 Prog_390 Prog_396
#> "01112" "0132" "033" "01212" "01112" "0142" "01111" "043" "0141"
#> Prog_402 Prog_408 Prog_414 Prog_420 Prog_426 Prog_384 HSPC_433 HSPC_439 HSPC_445
#> "0412" "0141" "01312" "01212" "01211" "0411" "02121" "02121" "02121"
#> HSPC_451 HSPC_457 HSPC_463 LT-HSC_109 HSPC_427 HSPC_434 HSPC_440 HSPC_446 HSPC_452
#> "023" "022" "0322" "022" "023" "0213" "042" "022" "02111"
#> HSPC_458 HSPC_464 LT-HSC_110 HSPC_428 HSPC_435 HSPC_441 HSPC_447 HSPC_453 HSPC_459
#> "02112" "02112" "0312" "02121" "0312" "0312" "033" "0322" "0311"
#> HSPC_465 LT-HSC_111 HSPC_429 HSPC_436 HSPC_442 HSPC_448 HSPC_454 HSPC_460 HSPC_466
#> "0311" "022" "02111" "0132" "01221" "0311" "0132" "0312" "042"
#> LT-HSC_112 HSPC_430 HSPC_437 HSPC_443 HSPC_449 HSPC_455 HSPC_461 HSPC_467 LT-HSC_113
#> "0322" "0312" "02112" "0311" "0311" "022" "042" "0312" "0322"
#> HSPC_431 HSPC_438 HSPC_444 HSPC_450 HSPC_456 HSPC_462 HSPC_468 LT-HSC_114 HSPC_432
#> "0312" "0213" "022" "022" "01221" "0312" "0311" "023" "022"
#> Prog_433 Prog_439 Prog_445 Prog_451 Prog_457 Prog_463 LT-HSC_115 Prog_427 Prog_434
#> "0311" "033" "0321" "01312" "0141" "033" "01221" "022" "01111"
#> Prog_440 Prog_446 Prog_452 Prog_458 Prog_464 LT-HSC_116 Prog_428 Prog_435 Prog_441
#> "043" "0321" "02121" "043" "0321" "0312" "01221" "0411" "01211"
#> Prog_447 Prog_453 Prog_459 Prog_465 LT-HSC_117 Prog_429 Prog_436 Prog_442 Prog_448
#> "01223" "0142" "033" "043" "0312" "01111" "01221" "02112" "033"
#> Prog_454 Prog_460 Prog_466 LT-HSC_118 Prog_430 Prog_437 Prog_443 Prog_449 Prog_455
#> "0412" "042" "0411" "02112" "01121" "0132" "01311" "01111" "0312"
#> Prog_461 Prog_467 LT-HSC_119 Prog_431 Prog_438 Prog_444 Prog_450 Prog_456 Prog_462
#> "022" "033" "0213" "033" "022" "01111" "01222" "01223" "042"
#> Prog_468 LT-HSC_120 Prog_432 HSPC_475 HSPC_481 HSPC_487 HSPC_493 HSPC_499 HSPC_505
#> "0411" "0413" "043" "022" "023" "02121" "022" "022" "042"
#> LT-HSC_121 HSPC_469 HSPC_476 HSPC_482 HSPC_488 HSPC_494 HSPC_500 HSPC_506 LT-HSC_122
#> "0213" "023" "02111" "022" "022" "022" "022" "022" "042"
#> HSPC_470 HSPC_477 HSPC_483 HSPC_489 HSPC_495 HSPC_501 HSPC_507 LT-HSC_123 HSPC_471
#> "022" "01221" "022" "042" "043" "023" "022" "022" "022"
#> HSPC_478 HSPC_484 HSPC_490 HSPC_496 HSPC_502 HSPC_508 LT-HSC_124 HSPC_472 HSPC_479
#> "022" "02112" "0311" "0312" "0321" "01311" "0312" "0321" "0312"
#> HSPC_485 HSPC_491 HSPC_497 HSPC_503 HSPC_509 LT-HSC_125 HSPC_473 HSPC_480 HSPC_486
#> "01212" "0412" "022" "01212" "042" "0312" "0311" "0321" "042"
#> HSPC_492 HSPC_498 HSPC_504 HSPC_510 LT-HSC_126 HSPC_474 Prog_475 Prog_481 Prog_487
#> "0321" "0311" "022" "0412" "0322" "0321" "01312" "033" "01312"
#> Prog_493 Prog_499 Prog_505 LT-HSC_127 Prog_469 Prog_476 Prog_482 Prog_488 Prog_494
#> "01222" "01212" "01312" "02122" "042" "01213" "01222" "01311" "043"
#> Prog_500 Prog_506 LT-HSC_128 Prog_470 Prog_477 Prog_483 Prog_489 Prog_495 Prog_501
#> "01312" "01211" "0312" "01213" "01121" "043" "01211" "0321" "01223"
#> Prog_507 LT-HSC_129 Prog_471 Prog_478 Prog_484 Prog_490 Prog_496 Prog_502 Prog_508
#> "0411" "02112" "01222" "01113" "01223" "043" "033" "01121" "01113"
#> LT-HSC_130 Prog_472 Prog_479 Prog_485 Prog_491 Prog_497 Prog_503 Prog_509 LT-HSC_131
#> "0132" "043" "01222" "0132" "01311" "0411" "043" "0311" "0312"
#> Prog_473 Prog_480 Prog_486 Prog_492 Prog_498 Prog_504 Prog_510 LT-HSC_132 Prog_474
#> "01223" "023" "01211" "0311" "0213" "01213" "042" "0141" "0322"
#> HSPC_517 HSPC_523 HSPC_529 HSPC_535 HSPC_541 HSPC_547 LT-HSC_133 HSPC_511 HSPC_518
#> "023" "0322" "02111" "022" "022" "0322" "02121" "023" "022"
#> HSPC_524 HSPC_530 HSPC_536 HSPC_542 HSPC_548 LT-HSC_134 HSPC_512 HSPC_519 HSPC_525
#> "022" "022" "02111" "02111" "022" "023" "0321" "02112" "023"
#> HSPC_531 HSPC_537 HSPC_543 HSPC_549 LT-HSC_135 HSPC_513 HSPC_520 HSPC_526 HSPC_532
#> "022" "042" "042" "022" "022" "02121" "042" "0311" "042"
#> HSPC_538 HSPC_544 HSPC_550 LT-HSC_136 HSPC_514 HSPC_521 HSPC_527 HSPC_533 HSPC_539
#> "0311" "01213" "042" "023" "0312" "022" "01221" "0322" "022"
#> HSPC_545 HSPC_551 LT-HSC_137 HSPC_515 HSPC_522 HSPC_528 HSPC_534 HSPC_540 HSPC_546
#> "022" "042" "022" "0311" "022" "0413" "0311" "0321" "022"
#> HSPC_552 LT-HSC_138 HSPC_516 Prog_517 Prog_523 Prog_529 Prog_535 Prog_541 Prog_547
#> "042" "022" "0321" "033" "01122" "01311" "01122" "01311" "0132"
#> LT-HSC_139 Prog_511 Prog_518 Prog_524 Prog_530 Prog_536 Prog_542 Prog_548 LT-HSC_140
#> "0312" "0312" "0413" "042" "01213" "01122" "0413" "01122" "022"
#> Prog_512 Prog_519 Prog_525 Prog_531 Prog_537 Prog_543 Prog_549 LT-HSC_141 Prog_513
#> "0411" "042" "043" "01312" "022" "0142" "0413" "02111" "033"
#> Prog_520 Prog_526 Prog_532 Prog_538 Prog_544 Prog_550 LT-HSC_142 Prog_514 Prog_521
#> "01311" "023" "022" "02121" "023" "01213" "01213" "01223" "01213"
#> Prog_527 Prog_533 Prog_539 Prog_545 Prog_551 LT-HSC_143 Prog_515 Prog_522 Prog_528
#> "01213" "022" "0411" "0141" "01212" "0132" "043" "022" "0142"
#> Prog_534 Prog_540 Prog_546 Prog_552 LT-HSC_144 Prog_516 HSPC_559 HSPC_565 HSPC_571
#> "043" "023" "023" "0412" "042" "01111" "022" "023" "0311"
#> HSPC_577 HSPC_583 HSPC_589 LT-HSC_145 HSPC_553 HSPC_560 HSPC_566 HSPC_572 HSPC_578
#> "022" "02111" "022" "022" "01312" "022" "022" "023" "022"
#> HSPC_584 HSPC_590 LT-HSC_146 HSPC_554 HSPC_561 HSPC_567 HSPC_573 HSPC_579 HSPC_585
#> "022" "042" "0312" "022" "02111" "0311" "022" "0311" "022"
#> HSPC_591 LT-HSC_147 HSPC_555 HSPC_562 HSPC_568 HSPC_574 HSPC_580 HSPC_586 HSPC_592
#> "023" "022" "022" "023" "022" "01213" "0322" "0321" "0311"
#> LT-HSC_148 HSPC_556 HSPC_563 HSPC_569 HSPC_575 HSPC_581 HSPC_587 HSPC_593 LT-HSC_149
#> "042" "0321" "0312" "0413" "0311" "02112" "02112" "022" "022"
#> HSPC_557 HSPC_564 HSPC_570 HSPC_576 HSPC_582 HSPC_588 HSPC_594 LT-HSC_150 HSPC_558
#> "0321" "02112" "02112" "022" "022" "02121" "022" "022" "02112"
#> Prog_559 Prog_565 Prog_571 Prog_577 Prog_583 Prog_589 LT-HSC_151 Prog_553 Prog_560
#> "01222" "01213" "01223" "01212" "023" "023" "0322" "043" "01211"
#> Prog_566 Prog_572 Prog_578 Prog_584 Prog_590 LT-HSC_152 Prog_554 Prog_561 Prog_567
#> "0142" "0321" "0413" "01211" "01221" "022" "0311" "042" "01212"
#> Prog_573 Prog_579 Prog_585 Prog_591 LT-HSC_153 Prog_555 Prog_562 Prog_568 Prog_574
#> "023" "01223" "033" "023" "022" "0312" "01121" "033" "01211"
#> Prog_580 Prog_586 Prog_592 LT-HSC_154 Prog_556 Prog_563 Prog_569 Prog_575 Prog_581
#> "0311" "043" "01111" "02112" "033" "0213" "01311" "01113" "01222"
#> Prog_587 Prog_593 LT-HSC_155 Prog_557 Prog_564 Prog_570 Prog_576 Prog_582 Prog_588
#> "0132" "01222" "02111" "01222" "0312" "0411" "0141" "01223" "0312"
#> Prog_594 LT-HSC_156 Prog_558 HSPC_601 HSPC_607 HSPC_613 HSPC_619 HSPC_625 HSPC_631
#> "033" "01222" "0311" "042" "023" "042" "02112" "022" "0412"
#> LT-HSC_157 HSPC_595 HSPC_602 HSPC_608 HSPC_614 HSPC_620 HSPC_626 HSPC_632 LT-HSC_158
#> "023" "0312" "022" "022" "042" "022" "023" "02112" "022"
#> HSPC_596 HSPC_603 HSPC_609 HSPC_615 HSPC_621 HSPC_627 HSPC_633 LT-HSC_159 HSPC_597
#> "042" "0321" "023" "023" "02111" "042" "023" "0411" "042"
#> HSPC_604 HSPC_610 HSPC_616 HSPC_622 HSPC_628 HSPC_634 LT-HSC_160 HSPC_598 HSPC_605
#> "022" "022" "02111" "02111" "042" "042" "023" "042" "0213"
#> HSPC_611 HSPC_617 HSPC_623 HSPC_629 HSPC_635 LT-HSC_161 HSPC_599 HSPC_606 HSPC_612
#> "02112" "0322" "042" "042" "042" "023" "022" "0312" "0311"
#> HSPC_618 HSPC_624 HSPC_630 HSPC_636 LT-HSC_162 HSPC_600 Prog_601 Prog_607 Prog_613
#> "022" "0322" "022" "0311" "023" "023" "02112" "01213" "033"
#> Prog_619 Prog_625 Prog_631 LT-HSC_163 Prog_595 Prog_602 Prog_608 Prog_614 Prog_620
#> "022" "0413" "0322" "022" "022" "0132" "01122" "0132" "042"
#> Prog_626 Prog_632 LT-HSC_164 Prog_596 Prog_603 Prog_609 Prog_615 Prog_621 Prog_627
#> "01211" "01222" "0312" "033" "01122" "01212" "0411" "01212" "0311"
#> Prog_633 LT-HSC_165 Prog_597 Prog_604 Prog_610 Prog_616 Prog_622 Prog_628 Prog_634
#> "043" "022" "033" "033" "033" "01112" "01213" "01212" "043"
#> LT-HSC_166 Prog_598 Prog_605 Prog_611 Prog_617 Prog_623 Prog_629 Prog_635 LT-HSC_167
#> "042" "01212" "0141" "033" "0311" "0132" "01221" "033" "022"
#> Prog_599 Prog_606 Prog_612 Prog_618 Prog_624 Prog_630 Prog_636 LT-HSC_168 Prog_600
#> "01222" "0312" "01311" "01222" "01222" "01312" "0213" "01311" "01222"
#> HSPC_643 HSPC_649 HSPC_655 HSPC_661 HSPC_667 HSPC_673 LT-HSC_169 HSPC_637 HSPC_644
#> "042" "0322" "02121" "042" "022" "022" "023" "0312" "0132"
#> HSPC_650 HSPC_656 HSPC_662 HSPC_668 HSPC_674 LT-HSC_170 HSPC_638 HSPC_645 HSPC_651
#> "02112" "022" "022" "0321" "0311" "042" "0132" "0322" "0411"
#> HSPC_657 HSPC_663 HSPC_669 HSPC_675 LT-HSC_171 HSPC_639 HSPC_646 HSPC_652 HSPC_658
#> "023" "0412" "022" "02121" "042" "0312" "0312" "042" "0412"
#> HSPC_664 HSPC_670 HSPC_676 LT-HSC_172 HSPC_640 HSPC_647 HSPC_653 HSPC_659 HSPC_665
#> "0322" "023" "022" "022" "0312" "022" "02111" "02112" "042"
#> HSPC_671 HSPC_677 LT-HSC_173 HSPC_641 HSPC_648 HSPC_654 HSPC_660 HSPC_666 HSPC_672
#> "0321" "023" "022" "0312" "022" "042" "043" "0413" "0321"
#> HSPC_678 LT-HSC_174 HSPC_642 Prog_643 Prog_649 Prog_655 Prog_661 Prog_667 Prog_673
#> "022" "0312" "02112" "0412" "01121" "01121" "01312" "043" "042"
#> LT-HSC_175 Prog_637 Prog_644 Prog_650 Prog_656 Prog_662 Prog_668 Prog_674 LT-HSC_176
#> "02111" "0141" "033" "01212" "033" "033" "023" "033" "022"
#> Prog_638 Prog_645 Prog_651 Prog_657 Prog_663 Prog_669 Prog_675 LT-HSC_177 Prog_639
#> "01122" "043" "0312" "01112" "01122" "023" "01223" "022" "0142"
#> Prog_646 Prog_652 Prog_658 Prog_664 Prog_670 Prog_676 LT-HSC_178 Prog_640 Prog_647
#> "01223" "01222" "01213" "023" "01211" "033" "02112" "01113" "043"
#> Prog_653 Prog_659 Prog_665 Prog_671 Prog_677 LT-HSC_179 Prog_641 Prog_648 Prog_654
#> "043" "033" "0311" "0312" "01121" "0312" "023" "042" "0132"
#> Prog_660 Prog_666 Prog_672 Prog_678 LT-HSC_180 Prog_642 HSPC_685 HSPC_691 HSPC_697
#> "0312" "033" "0312" "0411" "043" "0322" "0213" "02121" "0413"
#> HSPC_703 HSPC_709 HSPC_715 LT-HSC_181 HSPC_679 HSPC_686 HSPC_692 HSPC_698 HSPC_704
#> "022" "023" "02122" "02121" "0312" "02112" "023" "022" "022"
#> HSPC_710 HSPC_716 LT-HSC_182 HSPC_680 HSPC_687 HSPC_693 HSPC_699 HSPC_705 HSPC_711
#> "02111" "022" "0213" "022" "023" "023" "022" "01213" "02111"
#> HSPC_717 LT-HSC_183 HSPC_681 HSPC_688 HSPC_694 HSPC_700 HSPC_706 HSPC_712 HSPC_718
#> "0412" "0312" "042" "02111" "02111" "0413" "033" "02111" "02111"
#> LT-HSC_184 HSPC_682 HSPC_689 HSPC_695 HSPC_701 HSPC_707 HSPC_713 HSPC_719 LT-HSC_185
#> "0311" "01213" "022" "0132" "042" "042" "02121" "022" "023"
#> HSPC_683 HSPC_690 HSPC_696 HSPC_702 HSPC_708 HSPC_714 HSPC_720 LT-HSC_186 HSPC_684
#> "0412" "022" "043" "022" "0311" "022" "01213" "02111" "023"
#> Prog_685 Prog_691 Prog_697 Prog_703 Prog_709 Prog_715 LT-HSC_187 Prog_679 Prog_686
#> "01211" "0213" "01122" "043" "0141" "01212" "0312" "01223" "0413"
#> Prog_692 Prog_698 Prog_704 Prog_710 Prog_716 LT-HSC_188 Prog_680 Prog_687 Prog_693
#> "0321" "01312" "0311" "0311" "033" "0312" "01221" "01212" "01221"
#> Prog_699 Prog_705 Prog_711 Prog_717 LT-HSC_189 Prog_681 Prog_688 Prog_694 Prog_700
#> "01213" "01213" "033" "01212" "02111" "01312" "01122" "033" "01112"
#> Prog_706 Prog_712 Prog_718 LT-HSC_190 Prog_682 Prog_689 Prog_695 Prog_701 Prog_707
#> "01311" "0132" "01222" "023" "0132" "033" "01111" "01112" "033"
#> Prog_713 Prog_719 LT-HSC_191 Prog_683 Prog_690 Prog_696 Prog_702 Prog_708 Prog_714
#> "01311" "01121" "0312" "023" "033" "0411" "0142" "0141" "0141"
#> Prog_720 LT-HSC_192 Prog_684 HSPC_727 HSPC_733 HSPC_739 HSPC_745 HSPC_751 HSPC_757
#> "0141" "01221" "0321" "022" "022" "023" "023" "022" "022"
#> LT-HSC_193 HSPC_721 HSPC_728 HSPC_734 HSPC_740 HSPC_746 HSPC_752 HSPC_758 LT-HSC_194
#> "022" "023" "0213" "01213" "022" "023" "023" "0322" "022"
#> HSPC_722 HSPC_729 HSPC_735 HSPC_741 HSPC_747 HSPC_753 HSPC_759 LT-HSC_195 HSPC_723
#> "0312" "0312" "042" "02112" "022" "0312" "0321" "0322" "0322"
#> HSPC_730 HSPC_736 HSPC_742 HSPC_748 HSPC_754 HSPC_760 LT-HSC_196 HSPC_724 HSPC_731
#> "0311" "0322" "0322" "022" "0213" "042" "02111" "0322" "0412"
#> HSPC_737 HSPC_743 HSPC_749 HSPC_755 HSPC_761 LT-HSC_197 HSPC_725 HSPC_732 HSPC_738
#> "01212" "0311" "022" "0312" "0322" "022" "023" "0322" "022"
#> HSPC_744 HSPC_750 HSPC_756 HSPC_762 LT-HSC_198 HSPC_726 Prog_727 Prog_733 Prog_739
#> "042" "0311" "022" "042" "022" "0213" "01213" "033" "0412"
#> Prog_745 Prog_751 Prog_757 LT-HSC_199 Prog_721 Prog_728 Prog_734 Prog_740 Prog_746
#> "033" "033" "0412" "02112" "0141" "0321" "0142" "033" "0411"
#> Prog_752 Prog_758 LT-HSC_200 Prog_722 Prog_729 Prog_735 Prog_741 Prog_747 Prog_753
#> "033" "033" "022" "0142" "023" "01213" "0213" "033" "01311"
#> Prog_759 LT-HSC_201 Prog_723 Prog_730 Prog_736 Prog_742 Prog_748 Prog_754 Prog_760
#> "01212" "022" "01122" "01121" "01311" "0213" "0413" "01312" "01222"
#> LT-HSC_202 Prog_724 Prog_731 Prog_737 Prog_743 Prog_749 Prog_755 Prog_761 LT-HSC_203
#> "0312" "033" "01121" "0312" "01213" "043" "0213" "0412" "0213"
#> Prog_725 Prog_732 Prog_738 Prog_744 Prog_750 Prog_756 Prog_762 LT-HSC_204 Prog_726
#> "0311" "043" "033" "033" "0413" "043" "0311" "0322" "0311"
#> HSPC_769 HSPC_775 HSPC_781 HSPC_787 HSPC_793 HSPC_799 LT-HSC_205 HSPC_763 HSPC_770
#> "023" "023" "022" "023" "02121" "023" "023" "02121" "042"
#> HSPC_776 HSPC_782 HSPC_788 HSPC_794 HSPC_800 LT-HSC_206 HSPC_764 HSPC_771 HSPC_777
#> "023" "022" "023" "0321" "0413" "022" "022" "0321" "0321"
#> HSPC_783 HSPC_789 HSPC_795 HSPC_801 LT-HSC_207 HSPC_765 HSPC_772 HSPC_778 HSPC_784
#> "022" "042" "0322" "0311" "042" "023" "042" "0312" "0312"
#> HSPC_790 HSPC_796 HSPC_802 LT-HSC_208 HSPC_766 HSPC_773 HSPC_779 HSPC_785 HSPC_791
#> "042" "01212" "022" "022" "01221" "0322" "042" "0311" "043"
#> HSPC_797 HSPC_803 LT-HSC_209 HSPC_767 HSPC_774 HSPC_780 HSPC_786 HSPC_792 HSPC_798
#> "0321" "022" "02112" "01221" "0321" "0311" "0311" "0213" "022"
#> HSPC_804 LT-HSC_210 HSPC_768 Prog_769 Prog_775 Prog_781 Prog_787 Prog_793 Prog_799
#> "022" "022" "023" "01223" "033" "01223" "043" "0132" "033"
#> LT-HSC_211 Prog_763 Prog_770 Prog_776 Prog_782 Prog_788 Prog_794 Prog_800 LT-HSC_212
#> "042" "01221" "0142" "01121" "01221" "01122" "01222" "01223" "0312"
#> Prog_764 Prog_771 Prog_777 Prog_783 Prog_789 Prog_795 Prog_801 LT-HSC_213 Prog_765
#> "01223" "0142" "01211" "0141" "01211" "01211" "0132" "022" "01311"
#> Prog_772 Prog_778 Prog_784 Prog_790 Prog_796 Prog_802 LT-HSC_214 Prog_766 Prog_773
#> "01223" "023" "0321" "01121" "0412" "0141" "0311" "02122" "02122"
#> Prog_779 Prog_785 Prog_791 Prog_797 Prog_803 LT-HSC_215 Prog_767 Prog_774 Prog_780
#> "01311" "033" "01211" "0311" "043" "0322" "01113" "01212" "01113"
#> Prog_786 Prog_792 Prog_798 Prog_804 LT-HSC_216 Prog_768 HSPC_811 HSPC_817 HSPC_823
#> "01113" "01312" "01311" "01212" "0411" "01221" "02122" "02122" "02121"
#> HSPC_829 HSPC_835 HSPC_841 HSPC_847 HSPC_805 HSPC_812 HSPC_818 HSPC_824 HSPC_830
#> "0213" "0321" "043" "023" "02122" "01221" "0312" "0311" "02121"
#> HSPC_836 HSPC_842 HSPC_848 HSPC_806 HSPC_813 HSPC_819 HSPC_825 HSPC_831 HSPC_837
#> "023" "023" "022" "023" "01221" "042" "0311" "0311" "0412"
#> HSPC_843 HSPC_849 HSPC_807 HSPC_814 HSPC_820 HSPC_826 HSPC_832 HSPC_838 HSPC_844
#> "0311" "022" "01212" "0413" "01221" "0311" "0321" "0321" "022"
#> HSPC_850 HSPC_808 HSPC_815 HSPC_821 HSPC_827 HSPC_833 HSPC_839 HSPC_845 HSPC_851
#> "02111" "01221" "0321" "042" "022" "01221" "0413" "0311" "023"
#> HSPC_809 HSPC_816 HSPC_822 HSPC_828 HSPC_834 HSPC_840 HSPC_846 HSPC_852 HSPC_810
#> "022" "042" "0312" "0321" "0322" "022" "042" "022" "022"
#> Prog_811 Prog_817 Prog_823 Prog_829 Prog_835 Prog_841 Prog_847 Prog_805 Prog_812
#> "0142" "0132" "0311" "01212" "0141" "0411" "01223" "042" "023"
#> Prog_818 Prog_824 Prog_830 Prog_836 Prog_842 Prog_848 Prog_806 Prog_813 Prog_819
#> "0142" "01223" "01122" "01311" "0141" "022" "033" "01121" "01121"
#> Prog_825 Prog_831 Prog_837 Prog_843 Prog_849 Prog_807 Prog_814 Prog_820 Prog_826
#> "01113" "0141" "0141" "01312" "042" "0141" "01121" "0132" "01122"
#> Prog_832 Prog_838 Prog_844 Prog_850 Prog_808 Prog_815 Prog_821 Prog_827 Prog_833
#> "01211" "01121" "0141" "0142" "01212" "0141" "01113" "033" "01221"
#> Prog_839 Prog_845 Prog_851 Prog_809 Prog_816 Prog_822 Prog_828 Prog_834 Prog_840
#> "01311" "01311" "033" "0132" "01223" "01113" "01113" "01212" "01212"
#> Prog_846 Prog_852 Prog_810
#> "01211" "0411" "01311"
get_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 767))
#> HSPC_007 HSPC_013 HSPC_019 HSPC_025 HSPC_031 HSPC_037 LT-HSC_001 HSPC_001 HSPC_008
#> "0213" "023" "02112" "042" "0322" "042" "023" "01221" "042"
#> HSPC_014 HSPC_020 HSPC_026 HSPC_032 HSPC_038 LT-HSC_002 HSPC_002 HSPC_009 HSPC_015
#> "022" "042" "0412" "02111" "022" "042" "022" "022" "023"
#> HSPC_021 HSPC_027 HSPC_033 HSPC_039 LT-HSC_003 HSPC_003 HSPC_010 HSPC_016 HSPC_022
#> "022" "033" "031" "02112" "023" "01213" "0213" "01221" "0412"
#> HSPC_028 HSPC_034 HSPC_040 LT-HSC_004 HSPC_004 HSPC_011 HSPC_017 HSPC_023 HSPC_029
#> "031" "01213" "0321" "022" "031" "042" "022" "042" "02112"
#> HSPC_035 HSPC_041 LT-HSC_005 HSPC_005 HSPC_012 HSPC_018 HSPC_024 HSPC_030 HSPC_036
#> "022" "042" "02112" "02112" "042" "042" "022" "031" "01212"
#> HSPC_042 LT-HSC_006 HSPC_006 Prog_007 Prog_013 Prog_019 Prog_025 Prog_031 Prog_037
#> "0322" "022" "0412" "01223" "01212" "01312" "0411" "033" "033"
#> LT-HSC_007 Prog_001 Prog_008 Prog_014 Prog_020 Prog_026 Prog_032 Prog_038 LT-HSC_008
#> "042" "043" "01112" "01121" "0142" "033" "0141" "0141" "031"
#> Prog_002 Prog_009 Prog_015 Prog_021 Prog_027 Prog_033 Prog_039 LT-HSC_009 Prog_003
#> "01213" "01112" "01212" "0141" "01222" "01121" "01112" "022" "01222"
#> Prog_010 Prog_016 Prog_022 Prog_028 Prog_034 Prog_040 LT-HSC_010 Prog_004 Prog_011
#> "0412" "0411" "0411" "01122" "02112" "042" "0412" "033" "0142"
#> Prog_017 Prog_023 Prog_029 Prog_035 Prog_041 LT-HSC_011 Prog_005 Prog_012 Prog_018
#> "01211" "01222" "0142" "01111" "0213" "0213" "0213" "022" "022"
#> Prog_024 Prog_030 Prog_036 Prog_042 LT-HSC_012 Prog_006 HSPC_049 HSPC_055 HSPC_061
#> "0142" "0411" "0412" "0411" "0411" "01111" "031" "042" "042"
#> HSPC_067 HSPC_073 HSPC_079 LT-HSC_013 HSPC_043 HSPC_050 HSPC_056 HSPC_062 HSPC_068
#> "042" "022" "0412" "022" "042" "043" "022" "0413" "022"
#> HSPC_074 HSPC_080 LT-HSC_014 HSPC_044 HSPC_051 HSPC_057 HSPC_063 HSPC_069 HSPC_075
#> "022" "0321" "022" "043" "0322" "022" "0412" "0321" "022"
#> HSPC_081 LT-HSC_015 HSPC_045 HSPC_052 HSPC_058 HSPC_064 HSPC_070 HSPC_076 HSPC_082
#> "0321" "022" "042" "043" "031" "0413" "033" "0321" "042"
#> LT-HSC_016 HSPC_046 HSPC_053 HSPC_059 HSPC_065 HSPC_071 HSPC_077 HSPC_083 LT-HSC_017
#> "022" "0322" "01212" "02112" "0321" "0413" "01212" "022" "022"
#> HSPC_047 HSPC_054 HSPC_060 HSPC_066 HSPC_072 HSPC_078 HSPC_084 LT-HSC_018 HSPC_048
#> "023" "031" "031" "031" "0413" "043" "042" "022" "0322"
#> Prog_049 Prog_055 Prog_061 Prog_067 Prog_073 Prog_079 LT-HSC_019 Prog_043 Prog_050
#> "01112" "01211" "01121" "0142" "0321" "01112" "02112" "0132" "01211"
#> Prog_056 Prog_062 Prog_068 Prog_074 Prog_080 LT-HSC_020 Prog_044 Prog_051 Prog_057
#> "01222" "042" "0321" "0411" "043" "031" "0321" "0141" "01312"
#> Prog_063 Prog_069 Prog_075 Prog_081 LT-HSC_021 Prog_045 Prog_052 Prog_058 Prog_064
#> "043" "01222" "01211" "01112" "0413" "0132" "043" "0142" "0141"
#> Prog_070 Prog_076 Prog_082 LT-HSC_022 Prog_046 Prog_053 Prog_059 Prog_065 Prog_071
#> "0412" "0141" "01111" "022" "01122" "01121" "01222" "01312" "01223"
#> Prog_077 Prog_083 LT-HSC_023 Prog_047 Prog_054 Prog_060 Prog_066 Prog_072 Prog_078
#> "01222" "01212" "022" "01211" "0411" "0213" "0142" "033" "0142"
#> Prog_084 LT-HSC_024 Prog_048 HSPC_091 HSPC_097 HSPC_103 HSPC_109 HSPC_115 HSPC_121
#> "01121" "033" "0321" "02122" "023" "022" "043" "022" "023"
#> LT-HSC_025 HSPC_085 HSPC_092 HSPC_098 HSPC_104 HSPC_110 HSPC_116 HSPC_122 LT-HSC_026
#> "02121" "042" "02121" "043" "023" "043" "02111" "031" "022"
#> HSPC_086 HSPC_093 HSPC_099 HSPC_105 HSPC_111 HSPC_117 HSPC_123 LT-HSC_027 HSPC_087
#> "02112" "02112" "042" "022" "022" "042" "022" "023" "022"
#> HSPC_094 HSPC_100 HSPC_106 HSPC_112 HSPC_118 HSPC_124 LT-HSC_028 HSPC_088 HSPC_095
#> "01221" "0321" "022" "02111" "031" "02111" "0321" "0321" "022"
#> HSPC_101 HSPC_107 HSPC_113 HSPC_119 HSPC_125 LT-HSC_029 HSPC_089 HSPC_096 HSPC_102
#> "01213" "042" "023" "023" "031" "02122" "0321" "043" "01211"
#> HSPC_108 HSPC_114 HSPC_120 HSPC_126 LT-HSC_030 HSPC_090 Prog_091 Prog_097 Prog_103
#> "031" "0322" "031" "0322" "02121" "01221" "01111" "01211" "01221"
#> Prog_109 Prog_115 Prog_121 LT-HSC_031 Prog_085 Prog_092 Prog_098 Prog_104 Prog_110
#> "0412" "0142" "0213" "0321" "01222" "033" "01121" "02111" "01112"
#> Prog_116 Prog_122 LT-HSC_032 Prog_086 Prog_093 Prog_099 Prog_105 Prog_111 Prog_117
#> "01221" "033" "01111" "02122" "01223" "01222" "01211" "0142" "0132"
#> Prog_123 LT-HSC_033 Prog_087 Prog_094 Prog_100 Prog_106 Prog_112 Prog_118 Prog_124
#> "01211" "031" "01211" "0141" "01121" "031" "01112" "0412" "033"
#> LT-HSC_034 Prog_088 Prog_095 Prog_101 Prog_107 Prog_113 Prog_119 Prog_125 LT-HSC_035
#> "031" "043" "01122" "01312" "01112" "01223" "01111" "031" "02122"
#> Prog_089 Prog_096 Prog_102 Prog_108 Prog_114 Prog_120 Prog_126 LT-HSC_036 Prog_090
#> "0142" "0322" "031" "0411" "0413" "023" "0141" "033" "01121"
#> HSPC_133 HSPC_139 HSPC_145 HSPC_151 HSPC_157 HSPC_163 LT-HSC_037 HSPC_127 HSPC_134
#> "022" "022" "023" "042" "043" "023" "023" "0412" "023"
#> HSPC_140 HSPC_146 HSPC_152 HSPC_158 HSPC_164 LT-HSC_038 HSPC_128 HSPC_135 HSPC_141
#> "023" "0412" "022" "042" "022" "023" "023" "031" "022"
#> HSPC_147 HSPC_153 HSPC_159 HSPC_165 LT-HSC_039 HSPC_129 HSPC_136 HSPC_142 HSPC_148
#> "023" "022" "042" "043" "022" "02111" "042" "042" "043"
#> HSPC_154 HSPC_160 HSPC_166 LT-HSC_040 HSPC_130 HSPC_137 HSPC_143 HSPC_149 HSPC_155
#> "043" "02112" "042" "022" "042" "02111" "022" "022" "023"
#> HSPC_161 HSPC_167 LT-HSC_041 HSPC_131 HSPC_138 HSPC_144 HSPC_150 HSPC_156 HSPC_162
#> "042" "023" "022" "022" "01221" "031" "02111" "01221" "0322"
#> HSPC_168 LT-HSC_042 HSPC_132 Prog_133 Prog_139 Prog_145 Prog_151 Prog_157 Prog_163
#> "0413" "022" "0132" "01211" "01121" "01213" "0321" "01222" "01113"
#> LT-HSC_043 Prog_127 Prog_134 Prog_140 Prog_146 Prog_152 Prog_158 Prog_164 LT-HSC_044
#> "0132" "0321" "043" "01111" "01113" "043" "01112" "0213" "043"
#> Prog_128 Prog_135 Prog_141 Prog_147 Prog_153 Prog_159 Prog_165 LT-HSC_045 Prog_129
#> "01211" "0322" "0132" "02112" "01222" "0412" "043" "0412" "01311"
#> Prog_136 Prog_142 Prog_148 Prog_154 Prog_160 Prog_166 LT-HSC_046 Prog_130 Prog_137
#> "0132" "033" "023" "033" "022" "0141" "031" "01312" "01222"
#> Prog_143 Prog_149 Prog_155 Prog_161 Prog_167 LT-HSC_047 Prog_131 Prog_138 Prog_144
#> "01312" "0413" "01211" "033" "01212" "0213" "033" "02111" "043"
#> Prog_150 Prog_156 Prog_162 Prog_168 LT-HSC_048 Prog_132 HSPC_175 HSPC_181 HSPC_187
#> "01312" "02122" "0412" "01312" "023" "01312" "042" "022" "022"
#> HSPC_193 HSPC_199 HSPC_205 LT-HSC_049 HSPC_169 HSPC_176 HSPC_182 HSPC_188 HSPC_194
#> "033" "031" "022" "022" "042" "022" "023" "02111" "02112"
#> HSPC_200 HSPC_206 LT-HSC_050 HSPC_170 HSPC_177 HSPC_183 HSPC_189 HSPC_195 HSPC_201
#> "022" "01223" "022" "023" "022" "033" "031" "01213" "02112"
#> HSPC_207 LT-HSC_051 HSPC_171 HSPC_178 HSPC_184 HSPC_190 HSPC_196 HSPC_202 HSPC_208
#> "0321" "022" "022" "031" "02121" "0413" "042" "0322" "022"
#> LT-HSC_052 HSPC_172 HSPC_179 HSPC_185 HSPC_191 HSPC_197 HSPC_203 HSPC_209 LT-HSC_053
#> "01221" "01221" "01221" "023" "022" "02112" "042" "02112" "02112"
#> HSPC_173 HSPC_180 HSPC_186 HSPC_192 HSPC_198 HSPC_204 HSPC_210 LT-HSC_054 HSPC_174
#> "023" "043" "033" "022" "031" "0412" "043" "022" "031"
#> Prog_175 Prog_181 Prog_187 Prog_193 Prog_199 Prog_205 LT-HSC_055 Prog_169 Prog_176
#> "0411" "02112" "033" "042" "0321" "0413" "0132" "02112" "01221"
#> Prog_182 Prog_188 Prog_194 Prog_200 Prog_206 LT-HSC_056 Prog_170 Prog_177 Prog_183
#> "043" "0141" "023" "043" "01222" "01312" "01112" "042" "0132"
#> Prog_189 Prog_195 Prog_201 Prog_207 LT-HSC_057 Prog_171 Prog_178 Prog_184 Prog_190
#> "01222" "042" "0412" "0142" "031" "042" "01121" "01312" "01211"
#> Prog_196 Prog_202 Prog_208 LT-HSC_058 Prog_172 Prog_179 Prog_185 Prog_191 Prog_197
#> "01111" "0213" "033" "0322" "0141" "01311" "01111" "033" "01312"
#> Prog_203 Prog_209 LT-HSC_059 Prog_173 Prog_180 Prog_186 Prog_192 Prog_198 Prog_204
#> "0132" "01311" "02122" "043" "0322" "01223" "01211" "02112" "023"
#> Prog_210 LT-HSC_060 Prog_174 HSPC_217 HSPC_223 HSPC_229 HSPC_235 HSPC_241 HSPC_247
#> "0322" "01311" "0213" "02122" "022" "023" "022" "02112" "023"
#> LT-HSC_061 HSPC_211 HSPC_218 HSPC_224 HSPC_230 HSPC_236 HSPC_242 HSPC_248 LT-HSC_062
#> "02121" "042" "022" "022" "042" "043" "023" "022" "023"
#> HSPC_212 HSPC_219 HSPC_225 HSPC_231 HSPC_237 HSPC_243 HSPC_249 LT-HSC_063 HSPC_213
#> "023" "042" "022" "023" "022" "0412" "022" "033" "0413"
#> HSPC_220 HSPC_226 HSPC_232 HSPC_238 HSPC_244 HSPC_250 LT-HSC_064 HSPC_214 HSPC_221
#> "022" "02112" "023" "02122" "0322" "0413" "01121" "01213" "031"
#> HSPC_227 HSPC_233 HSPC_239 HSPC_245 HSPC_251 LT-HSC_065 HSPC_215 HSPC_222 HSPC_228
#> "022" "042" "022" "022" "0413" "031" "0412" "042" "023"
#> HSPC_234 HSPC_240 HSPC_246 HSPC_252 LT-HSC_066 HSPC_216 Prog_217 Prog_223 Prog_229
#> "02112" "031" "022" "0213" "031" "01213" "01111" "042" "01112"
#> Prog_235 Prog_241 Prog_247 LT-HSC_067 Prog_211 Prog_218 Prog_224 Prog_230 Prog_236
#> "023" "022" "033" "0213" "01121" "01222" "0132" "0413" "01213"
#> Prog_242 Prog_248 LT-HSC_068 Prog_212 Prog_219 Prog_225 Prog_231 Prog_237 Prog_243
#> "0142" "043" "01221" "0141" "0213" "033" "0132" "042" "01312"
#> Prog_249 LT-HSC_069 Prog_213 Prog_220 Prog_226 Prog_232 Prog_238 Prog_244 Prog_250
#> "01111" "0322" "043" "0213" "031" "033" "01211" "0321" "0141"
#> LT-HSC_070 Prog_214 Prog_221 Prog_227 Prog_233 Prog_239 Prog_245 Prog_251 LT-HSC_071
#> "043" "0413" "01111" "0132" "01222" "01111" "01211" "02122" "0322"
#> Prog_215 Prog_222 Prog_228 Prog_234 Prog_240 Prog_246 Prog_252 LT-HSC_072 Prog_216
#> "01113" "0322" "01311" "01212" "01221" "033" "0322" "01211" "01113"
#> HSPC_259 HSPC_265 HSPC_271 HSPC_277 HSPC_283 HSPC_289 LT-HSC_073 HSPC_253 HSPC_260
#> "023" "022" "0412" "023" "022" "022" "023" "0413" "02112"
#> HSPC_266 HSPC_272 HSPC_278 HSPC_284 HSPC_290 LT-HSC_074 HSPC_254 HSPC_261 HSPC_267
#> "022" "02112" "042" "02112" "0413" "022" "022" "0132" "031"
#> HSPC_273 HSPC_279 HSPC_285 HSPC_291 LT-HSC_075 HSPC_255 HSPC_262 HSPC_268 HSPC_274
#> "02112" "043" "01213" "033" "031" "0322" "02121" "01212" "022"
#> HSPC_280 HSPC_286 HSPC_292 LT-HSC_076 HSPC_256 HSPC_263 HSPC_269 HSPC_275 HSPC_281
#> "0412" "042" "0412" "042" "01121" "0412" "0132" "01312" "023"
#> HSPC_287 HSPC_293 LT-HSC_077 HSPC_257 HSPC_264 HSPC_270 HSPC_276 HSPC_282 HSPC_288
#> "0413" "0412" "023" "0413" "022" "0321" "0321" "01212" "01212"
#> HSPC_294 LT-HSC_078 HSPC_258 Prog_259 Prog_265 Prog_271 Prog_277 Prog_283 Prog_289
#> "0413" "022" "01222" "031" "01121" "033" "031" "042" "0412"
#> LT-HSC_079 Prog_253 Prog_260 Prog_266 Prog_272 Prog_278 Prog_284 Prog_290 LT-HSC_080
#> "02112" "0142" "01223" "01221" "01223" "01121" "0142" "01122" "0321"
#> Prog_254 Prog_261 Prog_267 Prog_273 Prog_279 Prog_285 Prog_291 LT-HSC_081 Prog_255
#> "01121" "0141" "01311" "01312" "01112" "0141" "0411" "01221" "01211"
#> Prog_262 Prog_268 Prog_274 Prog_280 Prog_286 Prog_292 LT-HSC_082 Prog_256 Prog_263
#> "01223" "01223" "0141" "033" "01121" "01222" "0322" "042" "01311"
#> Prog_269 Prog_275 Prog_281 Prog_287 Prog_293 LT-HSC_083 Prog_257 Prog_264 Prog_270
#> "01122" "01223" "0142" "01312" "033" "02121" "0213" "023" "01311"
#> Prog_276 Prog_282 Prog_288 Prog_294 LT-HSC_084 Prog_258 HSPC_301 HSPC_307 HSPC_313
#> "01212" "01113" "01122" "01222" "033" "0132" "023" "022" "042"
#> HSPC_319 HSPC_325 HSPC_331 LT-HSC_085 HSPC_295 HSPC_302 HSPC_308 HSPC_314 HSPC_320
#> "02122" "022" "022" "022" "0413" "023" "043" "042" "043"
#> HSPC_326 HSPC_332 LT-HSC_086 HSPC_296 HSPC_303 HSPC_309 HSPC_315 HSPC_321 HSPC_327
#> "022" "01211" "042" "022" "01221" "022" "022" "042" "01212"
#> HSPC_333 LT-HSC_087 HSPC_297 HSPC_304 HSPC_310 HSPC_316 HSPC_322 HSPC_328 HSPC_334
#> "01213" "02122" "022" "0322" "022" "023" "031" "042" "022"
#> LT-HSC_088 HSPC_298 HSPC_305 HSPC_311 HSPC_317 HSPC_323 HSPC_329 HSPC_335 LT-HSC_089
#> "043" "0322" "0412" "02122" "023" "031" "042" "022" "022"
#> HSPC_299 HSPC_306 HSPC_312 HSPC_318 HSPC_324 HSPC_330 HSPC_336 LT-HSC_090 HSPC_300
#> "033" "033" "0413" "022" "031" "031" "022" "0322" "01221"
#> Prog_301 Prog_307 Prog_313 Prog_319 Prog_325 Prog_331 LT-HSC_091 Prog_295 Prog_302
#> "0411" "0412" "0413" "0132" "01211" "01212" "01111" "0412" "02122"
#> Prog_308 Prog_314 Prog_320 Prog_326 Prog_332 LT-HSC_092 Prog_296 Prog_303 Prog_309
#> "01223" "033" "01221" "01111" "01222" "02122" "01222" "022" "022"
#> Prog_315 Prog_321 Prog_327 Prog_333 LT-HSC_093 Prog_297 Prog_304 Prog_310 Prog_316
#> "0411" "0411" "01211" "043" "042" "043" "01211" "0412" "0411"
#> Prog_322 Prog_328 Prog_334 LT-HSC_094 Prog_298 Prog_305 Prog_311 Prog_317 Prog_323
#> "043" "0411" "0142" "042" "0142" "0413" "043" "02122" "0411"
#> Prog_329 Prog_335 LT-HSC_095 Prog_299 Prog_306 Prog_312 Prog_318 Prog_324 Prog_330
#> "0411" "0413" "01112" "01121" "022" "01111" "01111" "01122" "0132"
#> Prog_336 LT-HSC_096 Prog_300 HSPC_343 HSPC_349 HSPC_355 HSPC_361 HSPC_367 HSPC_373
#> "0132" "01212" "01311" "0132" "031" "0213" "023" "022" "023"
#> LT-HSC_097 HSPC_337 HSPC_344 HSPC_350 HSPC_356 HSPC_362 HSPC_368 HSPC_374 LT-HSC_098
#> "02121" "022" "0412" "022" "043" "0411" "042" "0321" "01122"
#> HSPC_338 HSPC_345 HSPC_351 HSPC_357 HSPC_363 HSPC_369 HSPC_375 LT-HSC_099 HSPC_339
#> "01112" "043" "043" "02111" "022" "02111" "02111" "023" "0321"
#> HSPC_346 HSPC_352 HSPC_358 HSPC_364 HSPC_370 HSPC_376 LT-HSC_100 HSPC_340 HSPC_347
#> "01213" "0412" "042" "042" "01312" "042" "01112" "0213" "02112"
#> HSPC_353 HSPC_359 HSPC_365 HSPC_371 HSPC_377 LT-HSC_101 HSPC_341 HSPC_348 HSPC_354
#> "01212" "0321" "023" "01212" "0413" "0411" "01221" "033" "022"
#> HSPC_360 HSPC_366 HSPC_372 HSPC_378 LT-HSC_102 HSPC_342 Prog_343 Prog_349 Prog_355
#> "042" "0213" "042" "02121" "01112" "01311" "0132" "0411" "0413"
#> Prog_361 Prog_367 Prog_373 LT-HSC_103 Prog_337 Prog_344 Prog_350 Prog_356 Prog_362
#> "0141" "01312" "01113" "0132" "01111" "02112" "0141" "01121" "0412"
#> Prog_368 Prog_374 LT-HSC_104 Prog_338 Prog_345 Prog_351 Prog_357 Prog_363 Prog_369
#> "0142" "0141" "02122" "01221" "0411" "0142" "01112" "0141" "0411"
#> Prog_375 LT-HSC_105 Prog_339 Prog_346 Prog_352 Prog_358 Prog_364 Prog_370 Prog_376
#> "01112" "0411" "01122" "0141" "01112" "031" "01122" "0411" "01121"
#> LT-HSC_106 Prog_340 Prog_347 Prog_353 Prog_359 Prog_365 Prog_371 Prog_377 LT-HSC_107
#> "0412" "0142" "0213" "0132" "01122" "0213" "01212" "01111" "023"
#> Prog_341 Prog_348 Prog_354 Prog_360 Prog_366 Prog_372 Prog_378 LT-HSC_108 Prog_342
#> "01212" "02121" "0412" "01112" "0142" "01121" "0322" "01211" "01112"
#> HSPC_385 HSPC_391 HSPC_397 HSPC_403 HSPC_409 HSPC_415 HSPC_421 HSPC_379 HSPC_386
#> "02111" "031" "02111" "042" "023" "023" "043" "02121" "042"
#> HSPC_392 HSPC_398 HSPC_404 HSPC_410 HSPC_416 HSPC_422 HSPC_380 HSPC_387 HSPC_393
#> "0321" "0321" "01121" "01212" "031" "0321" "0321" "0412" "0411"
#> HSPC_399 HSPC_405 HSPC_411 HSPC_417 HSPC_423 HSPC_381 HSPC_388 HSPC_394 HSPC_400
#> "031" "0321" "01212" "01221" "01221" "02112" "01221" "02111" "0412"
#> HSPC_406 HSPC_412 HSPC_418 HSPC_424 HSPC_382 HSPC_389 HSPC_395 HSPC_401 HSPC_407
#> "042" "01312" "031" "0413" "01221" "0141" "043" "02111" "01311"
#> HSPC_413 HSPC_419 HSPC_425 HSPC_383 HSPC_390 HSPC_396 HSPC_402 HSPC_408 HSPC_414
#> "042" "01312" "0413" "022" "042" "0321" "0321" "01111" "02112"
#> HSPC_420 HSPC_426 HSPC_384 Prog_385 Prog_391 Prog_397 Prog_403 Prog_409 Prog_415
#> "01221" "042" "02112" "01111" "0213" "01112" "01121" "01112" "01112"
#> Prog_421 Prog_379 Prog_386 Prog_392 Prog_398 Prog_404 Prog_410 Prog_416 Prog_422
#> "01112" "01122" "01112" "01222" "01112" "01113" "01121" "01121" "0413"
#> Prog_380 Prog_387 Prog_393 Prog_399 Prog_405 Prog_411 Prog_417 Prog_423 Prog_381
#> "01122" "01311" "01121" "01223" "01223" "042" "0411" "0412" "01122"
#> Prog_388 Prog_394 Prog_400 Prog_406 Prog_412 Prog_418 Prog_424 Prog_382 Prog_389
#> "01112" "033" "02111" "01121" "01213" "0141" "01121" "031" "0132"
#> Prog_395 Prog_401 Prog_407 Prog_413 Prog_419 Prog_425 Prog_383 Prog_390 Prog_396
#> "01112" "0132" "033" "01212" "01112" "0142" "01111" "043" "0141"
#> Prog_402 Prog_408 Prog_414 Prog_420 Prog_426 Prog_384 HSPC_433 HSPC_439 HSPC_445
#> "0412" "0141" "01312" "01212" "01211" "0411" "02121" "02121" "02121"
#> HSPC_451 HSPC_457 HSPC_463 LT-HSC_109 HSPC_427 HSPC_434 HSPC_440 HSPC_446 HSPC_452
#> "023" "022" "0322" "022" "023" "0213" "042" "022" "02111"
#> HSPC_458 HSPC_464 LT-HSC_110 HSPC_428 HSPC_435 HSPC_441 HSPC_447 HSPC_453 HSPC_459
#> "02112" "02112" "031" "02121" "031" "031" "033" "0322" "031"
#> HSPC_465 LT-HSC_111 HSPC_429 HSPC_436 HSPC_442 HSPC_448 HSPC_454 HSPC_460 HSPC_466
#> "031" "022" "02111" "0132" "01221" "031" "0132" "031" "042"
#> LT-HSC_112 HSPC_430 HSPC_437 HSPC_443 HSPC_449 HSPC_455 HSPC_461 HSPC_467 LT-HSC_113
#> "0322" "031" "02112" "031" "031" "022" "042" "031" "0322"
#> HSPC_431 HSPC_438 HSPC_444 HSPC_450 HSPC_456 HSPC_462 HSPC_468 LT-HSC_114 HSPC_432
#> "031" "0213" "022" "022" "01221" "031" "031" "023" "022"
#> Prog_433 Prog_439 Prog_445 Prog_451 Prog_457 Prog_463 LT-HSC_115 Prog_427 Prog_434
#> "031" "033" "0321" "01312" "0141" "033" "01221" "022" "01111"
#> Prog_440 Prog_446 Prog_452 Prog_458 Prog_464 LT-HSC_116 Prog_428 Prog_435 Prog_441
#> "043" "0321" "02121" "043" "0321" "031" "01221" "0411" "01211"
#> Prog_447 Prog_453 Prog_459 Prog_465 LT-HSC_117 Prog_429 Prog_436 Prog_442 Prog_448
#> "01223" "0142" "033" "043" "031" "01111" "01221" "02112" "033"
#> Prog_454 Prog_460 Prog_466 LT-HSC_118 Prog_430 Prog_437 Prog_443 Prog_449 Prog_455
#> "0412" "042" "0411" "02112" "01121" "0132" "01311" "01111" "031"
#> Prog_461 Prog_467 LT-HSC_119 Prog_431 Prog_438 Prog_444 Prog_450 Prog_456 Prog_462
#> "022" "033" "0213" "033" "022" "01111" "01222" "01223" "042"
#> Prog_468 LT-HSC_120 Prog_432 HSPC_475 HSPC_481 HSPC_487 HSPC_493 HSPC_499 HSPC_505
#> "0411" "0413" "043" "022" "023" "02121" "022" "022" "042"
#> LT-HSC_121 HSPC_469 HSPC_476 HSPC_482 HSPC_488 HSPC_494 HSPC_500 HSPC_506 LT-HSC_122
#> "0213" "023" "02111" "022" "022" "022" "022" "022" "042"
#> HSPC_470 HSPC_477 HSPC_483 HSPC_489 HSPC_495 HSPC_501 HSPC_507 LT-HSC_123 HSPC_471
#> "022" "01221" "022" "042" "043" "023" "022" "022" "022"
#> HSPC_478 HSPC_484 HSPC_490 HSPC_496 HSPC_502 HSPC_508 LT-HSC_124 HSPC_472 HSPC_479
#> "022" "02112" "031" "031" "0321" "01311" "031" "0321" "031"
#> HSPC_485 HSPC_491 HSPC_497 HSPC_503 HSPC_509 LT-HSC_125 HSPC_473 HSPC_480 HSPC_486
#> "01212" "0412" "022" "01212" "042" "031" "031" "0321" "042"
#> HSPC_492 HSPC_498 HSPC_504 HSPC_510 LT-HSC_126 HSPC_474 Prog_475 Prog_481 Prog_487
#> "0321" "031" "022" "0412" "0322" "0321" "01312" "033" "01312"
#> Prog_493 Prog_499 Prog_505 LT-HSC_127 Prog_469 Prog_476 Prog_482 Prog_488 Prog_494
#> "01222" "01212" "01312" "02122" "042" "01213" "01222" "01311" "043"
#> Prog_500 Prog_506 LT-HSC_128 Prog_470 Prog_477 Prog_483 Prog_489 Prog_495 Prog_501
#> "01312" "01211" "031" "01213" "01121" "043" "01211" "0321" "01223"
#> Prog_507 LT-HSC_129 Prog_471 Prog_478 Prog_484 Prog_490 Prog_496 Prog_502 Prog_508
#> "0411" "02112" "01222" "01113" "01223" "043" "033" "01121" "01113"
#> LT-HSC_130 Prog_472 Prog_479 Prog_485 Prog_491 Prog_497 Prog_503 Prog_509 LT-HSC_131
#> "0132" "043" "01222" "0132" "01311" "0411" "043" "031" "031"
#> Prog_473 Prog_480 Prog_486 Prog_492 Prog_498 Prog_504 Prog_510 LT-HSC_132 Prog_474
#> "01223" "023" "01211" "031" "0213" "01213" "042" "0141" "0322"
#> HSPC_517 HSPC_523 HSPC_529 HSPC_535 HSPC_541 HSPC_547 LT-HSC_133 HSPC_511 HSPC_518
#> "023" "0322" "02111" "022" "022" "0322" "02121" "023" "022"
#> HSPC_524 HSPC_530 HSPC_536 HSPC_542 HSPC_548 LT-HSC_134 HSPC_512 HSPC_519 HSPC_525
#> "022" "022" "02111" "02111" "022" "023" "0321" "02112" "023"
#> HSPC_531 HSPC_537 HSPC_543 HSPC_549 LT-HSC_135 HSPC_513 HSPC_520 HSPC_526 HSPC_532
#> "022" "042" "042" "022" "022" "02121" "042" "031" "042"
#> HSPC_538 HSPC_544 HSPC_550 LT-HSC_136 HSPC_514 HSPC_521 HSPC_527 HSPC_533 HSPC_539
#> "031" "01213" "042" "023" "031" "022" "01221" "0322" "022"
#> HSPC_545 HSPC_551 LT-HSC_137 HSPC_515 HSPC_522 HSPC_528 HSPC_534 HSPC_540 HSPC_546
#> "022" "042" "022" "031" "022" "0413" "031" "0321" "022"
#> HSPC_552 LT-HSC_138 HSPC_516 Prog_517 Prog_523 Prog_529 Prog_535 Prog_541 Prog_547
#> "042" "022" "0321" "033" "01122" "01311" "01122" "01311" "0132"
#> LT-HSC_139 Prog_511 Prog_518 Prog_524 Prog_530 Prog_536 Prog_542 Prog_548 LT-HSC_140
#> "031" "031" "0413" "042" "01213" "01122" "0413" "01122" "022"
#> Prog_512 Prog_519 Prog_525 Prog_531 Prog_537 Prog_543 Prog_549 LT-HSC_141 Prog_513
#> "0411" "042" "043" "01312" "022" "0142" "0413" "02111" "033"
#> Prog_520 Prog_526 Prog_532 Prog_538 Prog_544 Prog_550 LT-HSC_142 Prog_514 Prog_521
#> "01311" "023" "022" "02121" "023" "01213" "01213" "01223" "01213"
#> Prog_527 Prog_533 Prog_539 Prog_545 Prog_551 LT-HSC_143 Prog_515 Prog_522 Prog_528
#> "01213" "022" "0411" "0141" "01212" "0132" "043" "022" "0142"
#> Prog_534 Prog_540 Prog_546 Prog_552 LT-HSC_144 Prog_516 HSPC_559 HSPC_565 HSPC_571
#> "043" "023" "023" "0412" "042" "01111" "022" "023" "031"
#> HSPC_577 HSPC_583 HSPC_589 LT-HSC_145 HSPC_553 HSPC_560 HSPC_566 HSPC_572 HSPC_578
#> "022" "02111" "022" "022" "01312" "022" "022" "023" "022"
#> HSPC_584 HSPC_590 LT-HSC_146 HSPC_554 HSPC_561 HSPC_567 HSPC_573 HSPC_579 HSPC_585
#> "022" "042" "031" "022" "02111" "031" "022" "031" "022"
#> HSPC_591 LT-HSC_147 HSPC_555 HSPC_562 HSPC_568 HSPC_574 HSPC_580 HSPC_586 HSPC_592
#> "023" "022" "022" "023" "022" "01213" "0322" "0321" "031"
#> LT-HSC_148 HSPC_556 HSPC_563 HSPC_569 HSPC_575 HSPC_581 HSPC_587 HSPC_593 LT-HSC_149
#> "042" "0321" "031" "0413" "031" "02112" "02112" "022" "022"
#> HSPC_557 HSPC_564 HSPC_570 HSPC_576 HSPC_582 HSPC_588 HSPC_594 LT-HSC_150 HSPC_558
#> "0321" "02112" "02112" "022" "022" "02121" "022" "022" "02112"
#> Prog_559 Prog_565 Prog_571 Prog_577 Prog_583 Prog_589 LT-HSC_151 Prog_553 Prog_560
#> "01222" "01213" "01223" "01212" "023" "023" "0322" "043" "01211"
#> Prog_566 Prog_572 Prog_578 Prog_584 Prog_590 LT-HSC_152 Prog_554 Prog_561 Prog_567
#> "0142" "0321" "0413" "01211" "01221" "022" "031" "042" "01212"
#> Prog_573 Prog_579 Prog_585 Prog_591 LT-HSC_153 Prog_555 Prog_562 Prog_568 Prog_574
#> "023" "01223" "033" "023" "022" "031" "01121" "033" "01211"
#> Prog_580 Prog_586 Prog_592 LT-HSC_154 Prog_556 Prog_563 Prog_569 Prog_575 Prog_581
#> "031" "043" "01111" "02112" "033" "0213" "01311" "01113" "01222"
#> Prog_587 Prog_593 LT-HSC_155 Prog_557 Prog_564 Prog_570 Prog_576 Prog_582 Prog_588
#> "0132" "01222" "02111" "01222" "031" "0411" "0141" "01223" "031"
#> Prog_594 LT-HSC_156 Prog_558 HSPC_601 HSPC_607 HSPC_613 HSPC_619 HSPC_625 HSPC_631
#> "033" "01222" "031" "042" "023" "042" "02112" "022" "0412"
#> LT-HSC_157 HSPC_595 HSPC_602 HSPC_608 HSPC_614 HSPC_620 HSPC_626 HSPC_632 LT-HSC_158
#> "023" "031" "022" "022" "042" "022" "023" "02112" "022"
#> HSPC_596 HSPC_603 HSPC_609 HSPC_615 HSPC_621 HSPC_627 HSPC_633 LT-HSC_159 HSPC_597
#> "042" "0321" "023" "023" "02111" "042" "023" "0411" "042"
#> HSPC_604 HSPC_610 HSPC_616 HSPC_622 HSPC_628 HSPC_634 LT-HSC_160 HSPC_598 HSPC_605
#> "022" "022" "02111" "02111" "042" "042" "023" "042" "0213"
#> HSPC_611 HSPC_617 HSPC_623 HSPC_629 HSPC_635 LT-HSC_161 HSPC_599 HSPC_606 HSPC_612
#> "02112" "0322" "042" "042" "042" "023" "022" "031" "031"
#> HSPC_618 HSPC_624 HSPC_630 HSPC_636 LT-HSC_162 HSPC_600 Prog_601 Prog_607 Prog_613
#> "022" "0322" "022" "031" "023" "023" "02112" "01213" "033"
#> Prog_619 Prog_625 Prog_631 LT-HSC_163 Prog_595 Prog_602 Prog_608 Prog_614 Prog_620
#> "022" "0413" "0322" "022" "022" "0132" "01122" "0132" "042"
#> Prog_626 Prog_632 LT-HSC_164 Prog_596 Prog_603 Prog_609 Prog_615 Prog_621 Prog_627
#> "01211" "01222" "031" "033" "01122" "01212" "0411" "01212" "031"
#> Prog_633 LT-HSC_165 Prog_597 Prog_604 Prog_610 Prog_616 Prog_622 Prog_628 Prog_634
#> "043" "022" "033" "033" "033" "01112" "01213" "01212" "043"
#> LT-HSC_166 Prog_598 Prog_605 Prog_611 Prog_617 Prog_623 Prog_629 Prog_635 LT-HSC_167
#> "042" "01212" "0141" "033" "031" "0132" "01221" "033" "022"
#> Prog_599 Prog_606 Prog_612 Prog_618 Prog_624 Prog_630 Prog_636 LT-HSC_168 Prog_600
#> "01222" "031" "01311" "01222" "01222" "01312" "0213" "01311" "01222"
#> HSPC_643 HSPC_649 HSPC_655 HSPC_661 HSPC_667 HSPC_673 LT-HSC_169 HSPC_637 HSPC_644
#> "042" "0322" "02121" "042" "022" "022" "023" "031" "0132"
#> HSPC_650 HSPC_656 HSPC_662 HSPC_668 HSPC_674 LT-HSC_170 HSPC_638 HSPC_645 HSPC_651
#> "02112" "022" "022" "0321" "031" "042" "0132" "0322" "0411"
#> HSPC_657 HSPC_663 HSPC_669 HSPC_675 LT-HSC_171 HSPC_639 HSPC_646 HSPC_652 HSPC_658
#> "023" "0412" "022" "02121" "042" "031" "031" "042" "0412"
#> HSPC_664 HSPC_670 HSPC_676 LT-HSC_172 HSPC_640 HSPC_647 HSPC_653 HSPC_659 HSPC_665
#> "0322" "023" "022" "022" "031" "022" "02111" "02112" "042"
#> HSPC_671 HSPC_677 LT-HSC_173 HSPC_641 HSPC_648 HSPC_654 HSPC_660 HSPC_666 HSPC_672
#> "0321" "023" "022" "031" "022" "042" "043" "0413" "0321"
#> HSPC_678 LT-HSC_174 HSPC_642 Prog_643 Prog_649 Prog_655 Prog_661 Prog_667 Prog_673
#> "022" "031" "02112" "0412" "01121" "01121" "01312" "043" "042"
#> LT-HSC_175 Prog_637 Prog_644 Prog_650 Prog_656 Prog_662 Prog_668 Prog_674 LT-HSC_176
#> "02111" "0141" "033" "01212" "033" "033" "023" "033" "022"
#> Prog_638 Prog_645 Prog_651 Prog_657 Prog_663 Prog_669 Prog_675 LT-HSC_177 Prog_639
#> "01122" "043" "031" "01112" "01122" "023" "01223" "022" "0142"
#> Prog_646 Prog_652 Prog_658 Prog_664 Prog_670 Prog_676 LT-HSC_178 Prog_640 Prog_647
#> "01223" "01222" "01213" "023" "01211" "033" "02112" "01113" "043"
#> Prog_653 Prog_659 Prog_665 Prog_671 Prog_677 LT-HSC_179 Prog_641 Prog_648 Prog_654
#> "043" "033" "031" "031" "01121" "031" "023" "042" "0132"
#> Prog_660 Prog_666 Prog_672 Prog_678 LT-HSC_180 Prog_642 HSPC_685 HSPC_691 HSPC_697
#> "031" "033" "031" "0411" "043" "0322" "0213" "02121" "0413"
#> HSPC_703 HSPC_709 HSPC_715 LT-HSC_181 HSPC_679 HSPC_686 HSPC_692 HSPC_698 HSPC_704
#> "022" "023" "02122" "02121" "031" "02112" "023" "022" "022"
#> HSPC_710 HSPC_716 LT-HSC_182 HSPC_680 HSPC_687 HSPC_693 HSPC_699 HSPC_705 HSPC_711
#> "02111" "022" "0213" "022" "023" "023" "022" "01213" "02111"
#> HSPC_717 LT-HSC_183 HSPC_681 HSPC_688 HSPC_694 HSPC_700 HSPC_706 HSPC_712 HSPC_718
#> "0412" "031" "042" "02111" "02111" "0413" "033" "02111" "02111"
#> LT-HSC_184 HSPC_682 HSPC_689 HSPC_695 HSPC_701 HSPC_707 HSPC_713 HSPC_719 LT-HSC_185
#> "031" "01213" "022" "0132" "042" "042" "02121" "022" "023"
#> HSPC_683 HSPC_690 HSPC_696 HSPC_702 HSPC_708 HSPC_714 HSPC_720 LT-HSC_186 HSPC_684
#> "0412" "022" "043" "022" "031" "022" "01213" "02111" "023"
#> Prog_685 Prog_691 Prog_697 Prog_703 Prog_709 Prog_715 LT-HSC_187 Prog_679 Prog_686
#> "01211" "0213" "01122" "043" "0141" "01212" "031" "01223" "0413"
#> Prog_692 Prog_698 Prog_704 Prog_710 Prog_716 LT-HSC_188 Prog_680 Prog_687 Prog_693
#> "0321" "01312" "031" "031" "033" "031" "01221" "01212" "01221"
#> Prog_699 Prog_705 Prog_711 Prog_717 LT-HSC_189 Prog_681 Prog_688 Prog_694 Prog_700
#> "01213" "01213" "033" "01212" "02111" "01312" "01122" "033" "01112"
#> Prog_706 Prog_712 Prog_718 LT-HSC_190 Prog_682 Prog_689 Prog_695 Prog_701 Prog_707
#> "01311" "0132" "01222" "023" "0132" "033" "01111" "01112" "033"
#> Prog_713 Prog_719 LT-HSC_191 Prog_683 Prog_690 Prog_696 Prog_702 Prog_708 Prog_714
#> "01311" "01121" "031" "023" "033" "0411" "0142" "0141" "0141"
#> Prog_720 LT-HSC_192 Prog_684 HSPC_727 HSPC_733 HSPC_739 HSPC_745 HSPC_751 HSPC_757
#> "0141" "01221" "0321" "022" "022" "023" "023" "022" "022"
#> LT-HSC_193 HSPC_721 HSPC_728 HSPC_734 HSPC_740 HSPC_746 HSPC_752 HSPC_758 LT-HSC_194
#> "022" "023" "0213" "01213" "022" "023" "023" "0322" "022"
#> HSPC_722 HSPC_729 HSPC_735 HSPC_741 HSPC_747 HSPC_753 HSPC_759 LT-HSC_195 HSPC_723
#> "031" "031" "042" "02112" "022" "031" "0321" "0322" "0322"
#> HSPC_730 HSPC_736 HSPC_742 HSPC_748 HSPC_754 HSPC_760 LT-HSC_196 HSPC_724 HSPC_731
#> "031" "0322" "0322" "022" "0213" "042" "02111" "0322" "0412"
#> HSPC_737 HSPC_743 HSPC_749 HSPC_755 HSPC_761 LT-HSC_197 HSPC_725 HSPC_732 HSPC_738
#> "01212" "031" "022" "031" "0322" "022" "023" "0322" "022"
#> HSPC_744 HSPC_750 HSPC_756 HSPC_762 LT-HSC_198 HSPC_726 Prog_727 Prog_733 Prog_739
#> "042" "031" "022" "042" "022" "0213" "01213" "033" "0412"
#> Prog_745 Prog_751 Prog_757 LT-HSC_199 Prog_721 Prog_728 Prog_734 Prog_740 Prog_746
#> "033" "033" "0412" "02112" "0141" "0321" "0142" "033" "0411"
#> Prog_752 Prog_758 LT-HSC_200 Prog_722 Prog_729 Prog_735 Prog_741 Prog_747 Prog_753
#> "033" "033" "022" "0142" "023" "01213" "0213" "033" "01311"
#> Prog_759 LT-HSC_201 Prog_723 Prog_730 Prog_736 Prog_742 Prog_748 Prog_754 Prog_760
#> "01212" "022" "01122" "01121" "01311" "0213" "0413" "01312" "01222"
#> LT-HSC_202 Prog_724 Prog_731 Prog_737 Prog_743 Prog_749 Prog_755 Prog_761 LT-HSC_203
#> "031" "033" "01121" "031" "01213" "043" "0213" "0412" "0213"
#> Prog_725 Prog_732 Prog_738 Prog_744 Prog_750 Prog_756 Prog_762 LT-HSC_204 Prog_726
#> "031" "043" "033" "033" "0413" "043" "031" "0322" "031"
#> HSPC_769 HSPC_775 HSPC_781 HSPC_787 HSPC_793 HSPC_799 LT-HSC_205 HSPC_763 HSPC_770
#> "023" "023" "022" "023" "02121" "023" "023" "02121" "042"
#> HSPC_776 HSPC_782 HSPC_788 HSPC_794 HSPC_800 LT-HSC_206 HSPC_764 HSPC_771 HSPC_777
#> "023" "022" "023" "0321" "0413" "022" "022" "0321" "0321"
#> HSPC_783 HSPC_789 HSPC_795 HSPC_801 LT-HSC_207 HSPC_765 HSPC_772 HSPC_778 HSPC_784
#> "022" "042" "0322" "031" "042" "023" "042" "031" "031"
#> HSPC_790 HSPC_796 HSPC_802 LT-HSC_208 HSPC_766 HSPC_773 HSPC_779 HSPC_785 HSPC_791
#> "042" "01212" "022" "022" "01221" "0322" "042" "031" "043"
#> HSPC_797 HSPC_803 LT-HSC_209 HSPC_767 HSPC_774 HSPC_780 HSPC_786 HSPC_792 HSPC_798
#> "0321" "022" "02112" "01221" "0321" "031" "031" "0213" "022"
#> HSPC_804 LT-HSC_210 HSPC_768 Prog_769 Prog_775 Prog_781 Prog_787 Prog_793 Prog_799
#> "022" "022" "023" "01223" "033" "01223" "043" "0132" "033"
#> LT-HSC_211 Prog_763 Prog_770 Prog_776 Prog_782 Prog_788 Prog_794 Prog_800 LT-HSC_212
#> "042" "01221" "0142" "01121" "01221" "01122" "01222" "01223" "031"
#> Prog_764 Prog_771 Prog_777 Prog_783 Prog_789 Prog_795 Prog_801 LT-HSC_213 Prog_765
#> "01223" "0142" "01211" "0141" "01211" "01211" "0132" "022" "01311"
#> Prog_772 Prog_778 Prog_784 Prog_790 Prog_796 Prog_802 LT-HSC_214 Prog_766 Prog_773
#> "01223" "023" "0321" "01121" "0412" "0141" "031" "02122" "02122"
#> Prog_779 Prog_785 Prog_791 Prog_797 Prog_803 LT-HSC_215 Prog_767 Prog_774 Prog_780
#> "01311" "033" "01211" "031" "043" "0322" "01113" "01212" "01113"
#> Prog_786 Prog_792 Prog_798 Prog_804 LT-HSC_216 Prog_768 HSPC_811 HSPC_817 HSPC_823
#> "01113" "01312" "01311" "01212" "0411" "01221" "02122" "02122" "02121"
#> HSPC_829 HSPC_835 HSPC_841 HSPC_847 HSPC_805 HSPC_812 HSPC_818 HSPC_824 HSPC_830
#> "0213" "0321" "043" "023" "02122" "01221" "031" "031" "02121"
#> HSPC_836 HSPC_842 HSPC_848 HSPC_806 HSPC_813 HSPC_819 HSPC_825 HSPC_831 HSPC_837
#> "023" "023" "022" "023" "01221" "042" "031" "031" "0412"
#> HSPC_843 HSPC_849 HSPC_807 HSPC_814 HSPC_820 HSPC_826 HSPC_832 HSPC_838 HSPC_844
#> "031" "022" "01212" "0413" "01221" "031" "0321" "0321" "022"
#> HSPC_850 HSPC_808 HSPC_815 HSPC_821 HSPC_827 HSPC_833 HSPC_839 HSPC_845 HSPC_851
#> "02111" "01221" "0321" "042" "022" "01221" "0413" "031" "023"
#> HSPC_809 HSPC_816 HSPC_822 HSPC_828 HSPC_834 HSPC_840 HSPC_846 HSPC_852 HSPC_810
#> "022" "042" "031" "0321" "0322" "022" "042" "022" "022"
#> Prog_811 Prog_817 Prog_823 Prog_829 Prog_835 Prog_841 Prog_847 Prog_805 Prog_812
#> "0142" "0132" "031" "01212" "0141" "0411" "01223" "042" "023"
#> Prog_818 Prog_824 Prog_830 Prog_836 Prog_842 Prog_848 Prog_806 Prog_813 Prog_819
#> "0142" "01223" "01122" "01311" "0141" "022" "033" "01121" "01121"
#> Prog_825 Prog_831 Prog_837 Prog_843 Prog_849 Prog_807 Prog_814 Prog_820 Prog_826
#> "01113" "0141" "0141" "01312" "042" "0141" "01121" "0132" "01122"
#> Prog_832 Prog_838 Prog_844 Prog_850 Prog_808 Prog_815 Prog_821 Prog_827 Prog_833
#> "01211" "01121" "0141" "0142" "01212" "0141" "01113" "033" "01221"
#> Prog_839 Prog_845 Prog_851 Prog_809 Prog_816 Prog_822 Prog_828 Prog_834 Prog_840
#> "01311" "01311" "033" "0132" "01223" "01113" "01113" "01212" "01212"
#> Prog_846 Prog_852 Prog_810
#> "01211" "0411" "01311"
get_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 848))
#> HSPC_007 HSPC_013 HSPC_019 HSPC_025 HSPC_031 HSPC_037 LT-HSC_001 HSPC_001 HSPC_008
#> "0213" "023" "02112" "042" "032" "042" "023" "01221" "042"
#> HSPC_014 HSPC_020 HSPC_026 HSPC_032 HSPC_038 LT-HSC_002 HSPC_002 HSPC_009 HSPC_015
#> "022" "042" "0412" "02111" "022" "042" "022" "022" "023"
#> HSPC_021 HSPC_027 HSPC_033 HSPC_039 LT-HSC_003 HSPC_003 HSPC_010 HSPC_016 HSPC_022
#> "022" "033" "031" "02112" "023" "01213" "0213" "01221" "0412"
#> HSPC_028 HSPC_034 HSPC_040 LT-HSC_004 HSPC_004 HSPC_011 HSPC_017 HSPC_023 HSPC_029
#> "031" "01213" "032" "022" "031" "042" "022" "042" "02112"
#> HSPC_035 HSPC_041 LT-HSC_005 HSPC_005 HSPC_012 HSPC_018 HSPC_024 HSPC_030 HSPC_036
#> "022" "042" "02112" "02112" "042" "042" "022" "031" "01212"
#> HSPC_042 LT-HSC_006 HSPC_006 Prog_007 Prog_013 Prog_019 Prog_025 Prog_031 Prog_037
#> "032" "022" "0412" "01223" "01212" "01312" "0411" "033" "033"
#> LT-HSC_007 Prog_001 Prog_008 Prog_014 Prog_020 Prog_026 Prog_032 Prog_038 LT-HSC_008
#> "042" "043" "01112" "01121" "0142" "033" "0141" "0141" "031"
#> Prog_002 Prog_009 Prog_015 Prog_021 Prog_027 Prog_033 Prog_039 LT-HSC_009 Prog_003
#> "01213" "01112" "01212" "0141" "01222" "01121" "01112" "022" "01222"
#> Prog_010 Prog_016 Prog_022 Prog_028 Prog_034 Prog_040 LT-HSC_010 Prog_004 Prog_011
#> "0412" "0411" "0411" "01122" "02112" "042" "0412" "033" "0142"
#> Prog_017 Prog_023 Prog_029 Prog_035 Prog_041 LT-HSC_011 Prog_005 Prog_012 Prog_018
#> "01211" "01222" "0142" "01111" "0213" "0213" "0213" "022" "022"
#> Prog_024 Prog_030 Prog_036 Prog_042 LT-HSC_012 Prog_006 HSPC_049 HSPC_055 HSPC_061
#> "0142" "0411" "0412" "0411" "0411" "01111" "031" "042" "042"
#> HSPC_067 HSPC_073 HSPC_079 LT-HSC_013 HSPC_043 HSPC_050 HSPC_056 HSPC_062 HSPC_068
#> "042" "022" "0412" "022" "042" "043" "022" "0413" "022"
#> HSPC_074 HSPC_080 LT-HSC_014 HSPC_044 HSPC_051 HSPC_057 HSPC_063 HSPC_069 HSPC_075
#> "022" "032" "022" "043" "032" "022" "0412" "032" "022"
#> HSPC_081 LT-HSC_015 HSPC_045 HSPC_052 HSPC_058 HSPC_064 HSPC_070 HSPC_076 HSPC_082
#> "032" "022" "042" "043" "031" "0413" "033" "032" "042"
#> LT-HSC_016 HSPC_046 HSPC_053 HSPC_059 HSPC_065 HSPC_071 HSPC_077 HSPC_083 LT-HSC_017
#> "022" "032" "01212" "02112" "032" "0413" "01212" "022" "022"
#> HSPC_047 HSPC_054 HSPC_060 HSPC_066 HSPC_072 HSPC_078 HSPC_084 LT-HSC_018 HSPC_048
#> "023" "031" "031" "031" "0413" "043" "042" "022" "032"
#> Prog_049 Prog_055 Prog_061 Prog_067 Prog_073 Prog_079 LT-HSC_019 Prog_043 Prog_050
#> "01112" "01211" "01121" "0142" "032" "01112" "02112" "0132" "01211"
#> Prog_056 Prog_062 Prog_068 Prog_074 Prog_080 LT-HSC_020 Prog_044 Prog_051 Prog_057
#> "01222" "042" "032" "0411" "043" "031" "032" "0141" "01312"
#> Prog_063 Prog_069 Prog_075 Prog_081 LT-HSC_021 Prog_045 Prog_052 Prog_058 Prog_064
#> "043" "01222" "01211" "01112" "0413" "0132" "043" "0142" "0141"
#> Prog_070 Prog_076 Prog_082 LT-HSC_022 Prog_046 Prog_053 Prog_059 Prog_065 Prog_071
#> "0412" "0141" "01111" "022" "01122" "01121" "01222" "01312" "01223"
#> Prog_077 Prog_083 LT-HSC_023 Prog_047 Prog_054 Prog_060 Prog_066 Prog_072 Prog_078
#> "01222" "01212" "022" "01211" "0411" "0213" "0142" "033" "0142"
#> Prog_084 LT-HSC_024 Prog_048 HSPC_091 HSPC_097 HSPC_103 HSPC_109 HSPC_115 HSPC_121
#> "01121" "033" "032" "02122" "023" "022" "043" "022" "023"
#> LT-HSC_025 HSPC_085 HSPC_092 HSPC_098 HSPC_104 HSPC_110 HSPC_116 HSPC_122 LT-HSC_026
#> "02121" "042" "02121" "043" "023" "043" "02111" "031" "022"
#> HSPC_086 HSPC_093 HSPC_099 HSPC_105 HSPC_111 HSPC_117 HSPC_123 LT-HSC_027 HSPC_087
#> "02112" "02112" "042" "022" "022" "042" "022" "023" "022"
#> HSPC_094 HSPC_100 HSPC_106 HSPC_112 HSPC_118 HSPC_124 LT-HSC_028 HSPC_088 HSPC_095
#> "01221" "032" "022" "02111" "031" "02111" "032" "032" "022"
#> HSPC_101 HSPC_107 HSPC_113 HSPC_119 HSPC_125 LT-HSC_029 HSPC_089 HSPC_096 HSPC_102
#> "01213" "042" "023" "023" "031" "02122" "032" "043" "01211"
#> HSPC_108 HSPC_114 HSPC_120 HSPC_126 LT-HSC_030 HSPC_090 Prog_091 Prog_097 Prog_103
#> "031" "032" "031" "032" "02121" "01221" "01111" "01211" "01221"
#> Prog_109 Prog_115 Prog_121 LT-HSC_031 Prog_085 Prog_092 Prog_098 Prog_104 Prog_110
#> "0412" "0142" "0213" "032" "01222" "033" "01121" "02111" "01112"
#> Prog_116 Prog_122 LT-HSC_032 Prog_086 Prog_093 Prog_099 Prog_105 Prog_111 Prog_117
#> "01221" "033" "01111" "02122" "01223" "01222" "01211" "0142" "0132"
#> Prog_123 LT-HSC_033 Prog_087 Prog_094 Prog_100 Prog_106 Prog_112 Prog_118 Prog_124
#> "01211" "031" "01211" "0141" "01121" "031" "01112" "0412" "033"
#> LT-HSC_034 Prog_088 Prog_095 Prog_101 Prog_107 Prog_113 Prog_119 Prog_125 LT-HSC_035
#> "031" "043" "01122" "01312" "01112" "01223" "01111" "031" "02122"
#> Prog_089 Prog_096 Prog_102 Prog_108 Prog_114 Prog_120 Prog_126 LT-HSC_036 Prog_090
#> "0142" "032" "031" "0411" "0413" "023" "0141" "033" "01121"
#> HSPC_133 HSPC_139 HSPC_145 HSPC_151 HSPC_157 HSPC_163 LT-HSC_037 HSPC_127 HSPC_134
#> "022" "022" "023" "042" "043" "023" "023" "0412" "023"
#> HSPC_140 HSPC_146 HSPC_152 HSPC_158 HSPC_164 LT-HSC_038 HSPC_128 HSPC_135 HSPC_141
#> "023" "0412" "022" "042" "022" "023" "023" "031" "022"
#> HSPC_147 HSPC_153 HSPC_159 HSPC_165 LT-HSC_039 HSPC_129 HSPC_136 HSPC_142 HSPC_148
#> "023" "022" "042" "043" "022" "02111" "042" "042" "043"
#> HSPC_154 HSPC_160 HSPC_166 LT-HSC_040 HSPC_130 HSPC_137 HSPC_143 HSPC_149 HSPC_155
#> "043" "02112" "042" "022" "042" "02111" "022" "022" "023"
#> HSPC_161 HSPC_167 LT-HSC_041 HSPC_131 HSPC_138 HSPC_144 HSPC_150 HSPC_156 HSPC_162
#> "042" "023" "022" "022" "01221" "031" "02111" "01221" "032"
#> HSPC_168 LT-HSC_042 HSPC_132 Prog_133 Prog_139 Prog_145 Prog_151 Prog_157 Prog_163
#> "0413" "022" "0132" "01211" "01121" "01213" "032" "01222" "01113"
#> LT-HSC_043 Prog_127 Prog_134 Prog_140 Prog_146 Prog_152 Prog_158 Prog_164 LT-HSC_044
#> "0132" "032" "043" "01111" "01113" "043" "01112" "0213" "043"
#> Prog_128 Prog_135 Prog_141 Prog_147 Prog_153 Prog_159 Prog_165 LT-HSC_045 Prog_129
#> "01211" "032" "0132" "02112" "01222" "0412" "043" "0412" "01311"
#> Prog_136 Prog_142 Prog_148 Prog_154 Prog_160 Prog_166 LT-HSC_046 Prog_130 Prog_137
#> "0132" "033" "023" "033" "022" "0141" "031" "01312" "01222"
#> Prog_143 Prog_149 Prog_155 Prog_161 Prog_167 LT-HSC_047 Prog_131 Prog_138 Prog_144
#> "01312" "0413" "01211" "033" "01212" "0213" "033" "02111" "043"
#> Prog_150 Prog_156 Prog_162 Prog_168 LT-HSC_048 Prog_132 HSPC_175 HSPC_181 HSPC_187
#> "01312" "02122" "0412" "01312" "023" "01312" "042" "022" "022"
#> HSPC_193 HSPC_199 HSPC_205 LT-HSC_049 HSPC_169 HSPC_176 HSPC_182 HSPC_188 HSPC_194
#> "033" "031" "022" "022" "042" "022" "023" "02111" "02112"
#> HSPC_200 HSPC_206 LT-HSC_050 HSPC_170 HSPC_177 HSPC_183 HSPC_189 HSPC_195 HSPC_201
#> "022" "01223" "022" "023" "022" "033" "031" "01213" "02112"
#> HSPC_207 LT-HSC_051 HSPC_171 HSPC_178 HSPC_184 HSPC_190 HSPC_196 HSPC_202 HSPC_208
#> "032" "022" "022" "031" "02121" "0413" "042" "032" "022"
#> LT-HSC_052 HSPC_172 HSPC_179 HSPC_185 HSPC_191 HSPC_197 HSPC_203 HSPC_209 LT-HSC_053
#> "01221" "01221" "01221" "023" "022" "02112" "042" "02112" "02112"
#> HSPC_173 HSPC_180 HSPC_186 HSPC_192 HSPC_198 HSPC_204 HSPC_210 LT-HSC_054 HSPC_174
#> "023" "043" "033" "022" "031" "0412" "043" "022" "031"
#> Prog_175 Prog_181 Prog_187 Prog_193 Prog_199 Prog_205 LT-HSC_055 Prog_169 Prog_176
#> "0411" "02112" "033" "042" "032" "0413" "0132" "02112" "01221"
#> Prog_182 Prog_188 Prog_194 Prog_200 Prog_206 LT-HSC_056 Prog_170 Prog_177 Prog_183
#> "043" "0141" "023" "043" "01222" "01312" "01112" "042" "0132"
#> Prog_189 Prog_195 Prog_201 Prog_207 LT-HSC_057 Prog_171 Prog_178 Prog_184 Prog_190
#> "01222" "042" "0412" "0142" "031" "042" "01121" "01312" "01211"
#> Prog_196 Prog_202 Prog_208 LT-HSC_058 Prog_172 Prog_179 Prog_185 Prog_191 Prog_197
#> "01111" "0213" "033" "032" "0141" "01311" "01111" "033" "01312"
#> Prog_203 Prog_209 LT-HSC_059 Prog_173 Prog_180 Prog_186 Prog_192 Prog_198 Prog_204
#> "0132" "01311" "02122" "043" "032" "01223" "01211" "02112" "023"
#> Prog_210 LT-HSC_060 Prog_174 HSPC_217 HSPC_223 HSPC_229 HSPC_235 HSPC_241 HSPC_247
#> "032" "01311" "0213" "02122" "022" "023" "022" "02112" "023"
#> LT-HSC_061 HSPC_211 HSPC_218 HSPC_224 HSPC_230 HSPC_236 HSPC_242 HSPC_248 LT-HSC_062
#> "02121" "042" "022" "022" "042" "043" "023" "022" "023"
#> HSPC_212 HSPC_219 HSPC_225 HSPC_231 HSPC_237 HSPC_243 HSPC_249 LT-HSC_063 HSPC_213
#> "023" "042" "022" "023" "022" "0412" "022" "033" "0413"
#> HSPC_220 HSPC_226 HSPC_232 HSPC_238 HSPC_244 HSPC_250 LT-HSC_064 HSPC_214 HSPC_221
#> "022" "02112" "023" "02122" "032" "0413" "01121" "01213" "031"
#> HSPC_227 HSPC_233 HSPC_239 HSPC_245 HSPC_251 LT-HSC_065 HSPC_215 HSPC_222 HSPC_228
#> "022" "042" "022" "022" "0413" "031" "0412" "042" "023"
#> HSPC_234 HSPC_240 HSPC_246 HSPC_252 LT-HSC_066 HSPC_216 Prog_217 Prog_223 Prog_229
#> "02112" "031" "022" "0213" "031" "01213" "01111" "042" "01112"
#> Prog_235 Prog_241 Prog_247 LT-HSC_067 Prog_211 Prog_218 Prog_224 Prog_230 Prog_236
#> "023" "022" "033" "0213" "01121" "01222" "0132" "0413" "01213"
#> Prog_242 Prog_248 LT-HSC_068 Prog_212 Prog_219 Prog_225 Prog_231 Prog_237 Prog_243
#> "0142" "043" "01221" "0141" "0213" "033" "0132" "042" "01312"
#> Prog_249 LT-HSC_069 Prog_213 Prog_220 Prog_226 Prog_232 Prog_238 Prog_244 Prog_250
#> "01111" "032" "043" "0213" "031" "033" "01211" "032" "0141"
#> LT-HSC_070 Prog_214 Prog_221 Prog_227 Prog_233 Prog_239 Prog_245 Prog_251 LT-HSC_071
#> "043" "0413" "01111" "0132" "01222" "01111" "01211" "02122" "032"
#> Prog_215 Prog_222 Prog_228 Prog_234 Prog_240 Prog_246 Prog_252 LT-HSC_072 Prog_216
#> "01113" "032" "01311" "01212" "01221" "033" "032" "01211" "01113"
#> HSPC_259 HSPC_265 HSPC_271 HSPC_277 HSPC_283 HSPC_289 LT-HSC_073 HSPC_253 HSPC_260
#> "023" "022" "0412" "023" "022" "022" "023" "0413" "02112"
#> HSPC_266 HSPC_272 HSPC_278 HSPC_284 HSPC_290 LT-HSC_074 HSPC_254 HSPC_261 HSPC_267
#> "022" "02112" "042" "02112" "0413" "022" "022" "0132" "031"
#> HSPC_273 HSPC_279 HSPC_285 HSPC_291 LT-HSC_075 HSPC_255 HSPC_262 HSPC_268 HSPC_274
#> "02112" "043" "01213" "033" "031" "032" "02121" "01212" "022"
#> HSPC_280 HSPC_286 HSPC_292 LT-HSC_076 HSPC_256 HSPC_263 HSPC_269 HSPC_275 HSPC_281
#> "0412" "042" "0412" "042" "01121" "0412" "0132" "01312" "023"
#> HSPC_287 HSPC_293 LT-HSC_077 HSPC_257 HSPC_264 HSPC_270 HSPC_276 HSPC_282 HSPC_288
#> "0413" "0412" "023" "0413" "022" "032" "032" "01212" "01212"
#> HSPC_294 LT-HSC_078 HSPC_258 Prog_259 Prog_265 Prog_271 Prog_277 Prog_283 Prog_289
#> "0413" "022" "01222" "031" "01121" "033" "031" "042" "0412"
#> LT-HSC_079 Prog_253 Prog_260 Prog_266 Prog_272 Prog_278 Prog_284 Prog_290 LT-HSC_080
#> "02112" "0142" "01223" "01221" "01223" "01121" "0142" "01122" "032"
#> Prog_254 Prog_261 Prog_267 Prog_273 Prog_279 Prog_285 Prog_291 LT-HSC_081 Prog_255
#> "01121" "0141" "01311" "01312" "01112" "0141" "0411" "01221" "01211"
#> Prog_262 Prog_268 Prog_274 Prog_280 Prog_286 Prog_292 LT-HSC_082 Prog_256 Prog_263
#> "01223" "01223" "0141" "033" "01121" "01222" "032" "042" "01311"
#> Prog_269 Prog_275 Prog_281 Prog_287 Prog_293 LT-HSC_083 Prog_257 Prog_264 Prog_270
#> "01122" "01223" "0142" "01312" "033" "02121" "0213" "023" "01311"
#> Prog_276 Prog_282 Prog_288 Prog_294 LT-HSC_084 Prog_258 HSPC_301 HSPC_307 HSPC_313
#> "01212" "01113" "01122" "01222" "033" "0132" "023" "022" "042"
#> HSPC_319 HSPC_325 HSPC_331 LT-HSC_085 HSPC_295 HSPC_302 HSPC_308 HSPC_314 HSPC_320
#> "02122" "022" "022" "022" "0413" "023" "043" "042" "043"
#> HSPC_326 HSPC_332 LT-HSC_086 HSPC_296 HSPC_303 HSPC_309 HSPC_315 HSPC_321 HSPC_327
#> "022" "01211" "042" "022" "01221" "022" "022" "042" "01212"
#> HSPC_333 LT-HSC_087 HSPC_297 HSPC_304 HSPC_310 HSPC_316 HSPC_322 HSPC_328 HSPC_334
#> "01213" "02122" "022" "032" "022" "023" "031" "042" "022"
#> LT-HSC_088 HSPC_298 HSPC_305 HSPC_311 HSPC_317 HSPC_323 HSPC_329 HSPC_335 LT-HSC_089
#> "043" "032" "0412" "02122" "023" "031" "042" "022" "022"
#> HSPC_299 HSPC_306 HSPC_312 HSPC_318 HSPC_324 HSPC_330 HSPC_336 LT-HSC_090 HSPC_300
#> "033" "033" "0413" "022" "031" "031" "022" "032" "01221"
#> Prog_301 Prog_307 Prog_313 Prog_319 Prog_325 Prog_331 LT-HSC_091 Prog_295 Prog_302
#> "0411" "0412" "0413" "0132" "01211" "01212" "01111" "0412" "02122"
#> Prog_308 Prog_314 Prog_320 Prog_326 Prog_332 LT-HSC_092 Prog_296 Prog_303 Prog_309
#> "01223" "033" "01221" "01111" "01222" "02122" "01222" "022" "022"
#> Prog_315 Prog_321 Prog_327 Prog_333 LT-HSC_093 Prog_297 Prog_304 Prog_310 Prog_316
#> "0411" "0411" "01211" "043" "042" "043" "01211" "0412" "0411"
#> Prog_322 Prog_328 Prog_334 LT-HSC_094 Prog_298 Prog_305 Prog_311 Prog_317 Prog_323
#> "043" "0411" "0142" "042" "0142" "0413" "043" "02122" "0411"
#> Prog_329 Prog_335 LT-HSC_095 Prog_299 Prog_306 Prog_312 Prog_318 Prog_324 Prog_330
#> "0411" "0413" "01112" "01121" "022" "01111" "01111" "01122" "0132"
#> Prog_336 LT-HSC_096 Prog_300 HSPC_343 HSPC_349 HSPC_355 HSPC_361 HSPC_367 HSPC_373
#> "0132" "01212" "01311" "0132" "031" "0213" "023" "022" "023"
#> LT-HSC_097 HSPC_337 HSPC_344 HSPC_350 HSPC_356 HSPC_362 HSPC_368 HSPC_374 LT-HSC_098
#> "02121" "022" "0412" "022" "043" "0411" "042" "032" "01122"
#> HSPC_338 HSPC_345 HSPC_351 HSPC_357 HSPC_363 HSPC_369 HSPC_375 LT-HSC_099 HSPC_339
#> "01112" "043" "043" "02111" "022" "02111" "02111" "023" "032"
#> HSPC_346 HSPC_352 HSPC_358 HSPC_364 HSPC_370 HSPC_376 LT-HSC_100 HSPC_340 HSPC_347
#> "01213" "0412" "042" "042" "01312" "042" "01112" "0213" "02112"
#> HSPC_353 HSPC_359 HSPC_365 HSPC_371 HSPC_377 LT-HSC_101 HSPC_341 HSPC_348 HSPC_354
#> "01212" "032" "023" "01212" "0413" "0411" "01221" "033" "022"
#> HSPC_360 HSPC_366 HSPC_372 HSPC_378 LT-HSC_102 HSPC_342 Prog_343 Prog_349 Prog_355
#> "042" "0213" "042" "02121" "01112" "01311" "0132" "0411" "0413"
#> Prog_361 Prog_367 Prog_373 LT-HSC_103 Prog_337 Prog_344 Prog_350 Prog_356 Prog_362
#> "0141" "01312" "01113" "0132" "01111" "02112" "0141" "01121" "0412"
#> Prog_368 Prog_374 LT-HSC_104 Prog_338 Prog_345 Prog_351 Prog_357 Prog_363 Prog_369
#> "0142" "0141" "02122" "01221" "0411" "0142" "01112" "0141" "0411"
#> Prog_375 LT-HSC_105 Prog_339 Prog_346 Prog_352 Prog_358 Prog_364 Prog_370 Prog_376
#> "01112" "0411" "01122" "0141" "01112" "031" "01122" "0411" "01121"
#> LT-HSC_106 Prog_340 Prog_347 Prog_353 Prog_359 Prog_365 Prog_371 Prog_377 LT-HSC_107
#> "0412" "0142" "0213" "0132" "01122" "0213" "01212" "01111" "023"
#> Prog_341 Prog_348 Prog_354 Prog_360 Prog_366 Prog_372 Prog_378 LT-HSC_108 Prog_342
#> "01212" "02121" "0412" "01112" "0142" "01121" "032" "01211" "01112"
#> HSPC_385 HSPC_391 HSPC_397 HSPC_403 HSPC_409 HSPC_415 HSPC_421 HSPC_379 HSPC_386
#> "02111" "031" "02111" "042" "023" "023" "043" "02121" "042"
#> HSPC_392 HSPC_398 HSPC_404 HSPC_410 HSPC_416 HSPC_422 HSPC_380 HSPC_387 HSPC_393
#> "032" "032" "01121" "01212" "031" "032" "032" "0412" "0411"
#> HSPC_399 HSPC_405 HSPC_411 HSPC_417 HSPC_423 HSPC_381 HSPC_388 HSPC_394 HSPC_400
#> "031" "032" "01212" "01221" "01221" "02112" "01221" "02111" "0412"
#> HSPC_406 HSPC_412 HSPC_418 HSPC_424 HSPC_382 HSPC_389 HSPC_395 HSPC_401 HSPC_407
#> "042" "01312" "031" "0413" "01221" "0141" "043" "02111" "01311"
#> HSPC_413 HSPC_419 HSPC_425 HSPC_383 HSPC_390 HSPC_396 HSPC_402 HSPC_408 HSPC_414
#> "042" "01312" "0413" "022" "042" "032" "032" "01111" "02112"
#> HSPC_420 HSPC_426 HSPC_384 Prog_385 Prog_391 Prog_397 Prog_403 Prog_409 Prog_415
#> "01221" "042" "02112" "01111" "0213" "01112" "01121" "01112" "01112"
#> Prog_421 Prog_379 Prog_386 Prog_392 Prog_398 Prog_404 Prog_410 Prog_416 Prog_422
#> "01112" "01122" "01112" "01222" "01112" "01113" "01121" "01121" "0413"
#> Prog_380 Prog_387 Prog_393 Prog_399 Prog_405 Prog_411 Prog_417 Prog_423 Prog_381
#> "01122" "01311" "01121" "01223" "01223" "042" "0411" "0412" "01122"
#> Prog_388 Prog_394 Prog_400 Prog_406 Prog_412 Prog_418 Prog_424 Prog_382 Prog_389
#> "01112" "033" "02111" "01121" "01213" "0141" "01121" "031" "0132"
#> Prog_395 Prog_401 Prog_407 Prog_413 Prog_419 Prog_425 Prog_383 Prog_390 Prog_396
#> "01112" "0132" "033" "01212" "01112" "0142" "01111" "043" "0141"
#> Prog_402 Prog_408 Prog_414 Prog_420 Prog_426 Prog_384 HSPC_433 HSPC_439 HSPC_445
#> "0412" "0141" "01312" "01212" "01211" "0411" "02121" "02121" "02121"
#> HSPC_451 HSPC_457 HSPC_463 LT-HSC_109 HSPC_427 HSPC_434 HSPC_440 HSPC_446 HSPC_452
#> "023" "022" "032" "022" "023" "0213" "042" "022" "02111"
#> HSPC_458 HSPC_464 LT-HSC_110 HSPC_428 HSPC_435 HSPC_441 HSPC_447 HSPC_453 HSPC_459
#> "02112" "02112" "031" "02121" "031" "031" "033" "032" "031"
#> HSPC_465 LT-HSC_111 HSPC_429 HSPC_436 HSPC_442 HSPC_448 HSPC_454 HSPC_460 HSPC_466
#> "031" "022" "02111" "0132" "01221" "031" "0132" "031" "042"
#> LT-HSC_112 HSPC_430 HSPC_437 HSPC_443 HSPC_449 HSPC_455 HSPC_461 HSPC_467 LT-HSC_113
#> "032" "031" "02112" "031" "031" "022" "042" "031" "032"
#> HSPC_431 HSPC_438 HSPC_444 HSPC_450 HSPC_456 HSPC_462 HSPC_468 LT-HSC_114 HSPC_432
#> "031" "0213" "022" "022" "01221" "031" "031" "023" "022"
#> Prog_433 Prog_439 Prog_445 Prog_451 Prog_457 Prog_463 LT-HSC_115 Prog_427 Prog_434
#> "031" "033" "032" "01312" "0141" "033" "01221" "022" "01111"
#> Prog_440 Prog_446 Prog_452 Prog_458 Prog_464 LT-HSC_116 Prog_428 Prog_435 Prog_441
#> "043" "032" "02121" "043" "032" "031" "01221" "0411" "01211"
#> Prog_447 Prog_453 Prog_459 Prog_465 LT-HSC_117 Prog_429 Prog_436 Prog_442 Prog_448
#> "01223" "0142" "033" "043" "031" "01111" "01221" "02112" "033"
#> Prog_454 Prog_460 Prog_466 LT-HSC_118 Prog_430 Prog_437 Prog_443 Prog_449 Prog_455
#> "0412" "042" "0411" "02112" "01121" "0132" "01311" "01111" "031"
#> Prog_461 Prog_467 LT-HSC_119 Prog_431 Prog_438 Prog_444 Prog_450 Prog_456 Prog_462
#> "022" "033" "0213" "033" "022" "01111" "01222" "01223" "042"
#> Prog_468 LT-HSC_120 Prog_432 HSPC_475 HSPC_481 HSPC_487 HSPC_493 HSPC_499 HSPC_505
#> "0411" "0413" "043" "022" "023" "02121" "022" "022" "042"
#> LT-HSC_121 HSPC_469 HSPC_476 HSPC_482 HSPC_488 HSPC_494 HSPC_500 HSPC_506 LT-HSC_122
#> "0213" "023" "02111" "022" "022" "022" "022" "022" "042"
#> HSPC_470 HSPC_477 HSPC_483 HSPC_489 HSPC_495 HSPC_501 HSPC_507 LT-HSC_123 HSPC_471
#> "022" "01221" "022" "042" "043" "023" "022" "022" "022"
#> HSPC_478 HSPC_484 HSPC_490 HSPC_496 HSPC_502 HSPC_508 LT-HSC_124 HSPC_472 HSPC_479
#> "022" "02112" "031" "031" "032" "01311" "031" "032" "031"
#> HSPC_485 HSPC_491 HSPC_497 HSPC_503 HSPC_509 LT-HSC_125 HSPC_473 HSPC_480 HSPC_486
#> "01212" "0412" "022" "01212" "042" "031" "031" "032" "042"
#> HSPC_492 HSPC_498 HSPC_504 HSPC_510 LT-HSC_126 HSPC_474 Prog_475 Prog_481 Prog_487
#> "032" "031" "022" "0412" "032" "032" "01312" "033" "01312"
#> Prog_493 Prog_499 Prog_505 LT-HSC_127 Prog_469 Prog_476 Prog_482 Prog_488 Prog_494
#> "01222" "01212" "01312" "02122" "042" "01213" "01222" "01311" "043"
#> Prog_500 Prog_506 LT-HSC_128 Prog_470 Prog_477 Prog_483 Prog_489 Prog_495 Prog_501
#> "01312" "01211" "031" "01213" "01121" "043" "01211" "032" "01223"
#> Prog_507 LT-HSC_129 Prog_471 Prog_478 Prog_484 Prog_490 Prog_496 Prog_502 Prog_508
#> "0411" "02112" "01222" "01113" "01223" "043" "033" "01121" "01113"
#> LT-HSC_130 Prog_472 Prog_479 Prog_485 Prog_491 Prog_497 Prog_503 Prog_509 LT-HSC_131
#> "0132" "043" "01222" "0132" "01311" "0411" "043" "031" "031"
#> Prog_473 Prog_480 Prog_486 Prog_492 Prog_498 Prog_504 Prog_510 LT-HSC_132 Prog_474
#> "01223" "023" "01211" "031" "0213" "01213" "042" "0141" "032"
#> HSPC_517 HSPC_523 HSPC_529 HSPC_535 HSPC_541 HSPC_547 LT-HSC_133 HSPC_511 HSPC_518
#> "023" "032" "02111" "022" "022" "032" "02121" "023" "022"
#> HSPC_524 HSPC_530 HSPC_536 HSPC_542 HSPC_548 LT-HSC_134 HSPC_512 HSPC_519 HSPC_525
#> "022" "022" "02111" "02111" "022" "023" "032" "02112" "023"
#> HSPC_531 HSPC_537 HSPC_543 HSPC_549 LT-HSC_135 HSPC_513 HSPC_520 HSPC_526 HSPC_532
#> "022" "042" "042" "022" "022" "02121" "042" "031" "042"
#> HSPC_538 HSPC_544 HSPC_550 LT-HSC_136 HSPC_514 HSPC_521 HSPC_527 HSPC_533 HSPC_539
#> "031" "01213" "042" "023" "031" "022" "01221" "032" "022"
#> HSPC_545 HSPC_551 LT-HSC_137 HSPC_515 HSPC_522 HSPC_528 HSPC_534 HSPC_540 HSPC_546
#> "022" "042" "022" "031" "022" "0413" "031" "032" "022"
#> HSPC_552 LT-HSC_138 HSPC_516 Prog_517 Prog_523 Prog_529 Prog_535 Prog_541 Prog_547
#> "042" "022" "032" "033" "01122" "01311" "01122" "01311" "0132"
#> LT-HSC_139 Prog_511 Prog_518 Prog_524 Prog_530 Prog_536 Prog_542 Prog_548 LT-HSC_140
#> "031" "031" "0413" "042" "01213" "01122" "0413" "01122" "022"
#> Prog_512 Prog_519 Prog_525 Prog_531 Prog_537 Prog_543 Prog_549 LT-HSC_141 Prog_513
#> "0411" "042" "043" "01312" "022" "0142" "0413" "02111" "033"
#> Prog_520 Prog_526 Prog_532 Prog_538 Prog_544 Prog_550 LT-HSC_142 Prog_514 Prog_521
#> "01311" "023" "022" "02121" "023" "01213" "01213" "01223" "01213"
#> Prog_527 Prog_533 Prog_539 Prog_545 Prog_551 LT-HSC_143 Prog_515 Prog_522 Prog_528
#> "01213" "022" "0411" "0141" "01212" "0132" "043" "022" "0142"
#> Prog_534 Prog_540 Prog_546 Prog_552 LT-HSC_144 Prog_516 HSPC_559 HSPC_565 HSPC_571
#> "043" "023" "023" "0412" "042" "01111" "022" "023" "031"
#> HSPC_577 HSPC_583 HSPC_589 LT-HSC_145 HSPC_553 HSPC_560 HSPC_566 HSPC_572 HSPC_578
#> "022" "02111" "022" "022" "01312" "022" "022" "023" "022"
#> HSPC_584 HSPC_590 LT-HSC_146 HSPC_554 HSPC_561 HSPC_567 HSPC_573 HSPC_579 HSPC_585
#> "022" "042" "031" "022" "02111" "031" "022" "031" "022"
#> HSPC_591 LT-HSC_147 HSPC_555 HSPC_562 HSPC_568 HSPC_574 HSPC_580 HSPC_586 HSPC_592
#> "023" "022" "022" "023" "022" "01213" "032" "032" "031"
#> LT-HSC_148 HSPC_556 HSPC_563 HSPC_569 HSPC_575 HSPC_581 HSPC_587 HSPC_593 LT-HSC_149
#> "042" "032" "031" "0413" "031" "02112" "02112" "022" "022"
#> HSPC_557 HSPC_564 HSPC_570 HSPC_576 HSPC_582 HSPC_588 HSPC_594 LT-HSC_150 HSPC_558
#> "032" "02112" "02112" "022" "022" "02121" "022" "022" "02112"
#> Prog_559 Prog_565 Prog_571 Prog_577 Prog_583 Prog_589 LT-HSC_151 Prog_553 Prog_560
#> "01222" "01213" "01223" "01212" "023" "023" "032" "043" "01211"
#> Prog_566 Prog_572 Prog_578 Prog_584 Prog_590 LT-HSC_152 Prog_554 Prog_561 Prog_567
#> "0142" "032" "0413" "01211" "01221" "022" "031" "042" "01212"
#> Prog_573 Prog_579 Prog_585 Prog_591 LT-HSC_153 Prog_555 Prog_562 Prog_568 Prog_574
#> "023" "01223" "033" "023" "022" "031" "01121" "033" "01211"
#> Prog_580 Prog_586 Prog_592 LT-HSC_154 Prog_556 Prog_563 Prog_569 Prog_575 Prog_581
#> "031" "043" "01111" "02112" "033" "0213" "01311" "01113" "01222"
#> Prog_587 Prog_593 LT-HSC_155 Prog_557 Prog_564 Prog_570 Prog_576 Prog_582 Prog_588
#> "0132" "01222" "02111" "01222" "031" "0411" "0141" "01223" "031"
#> Prog_594 LT-HSC_156 Prog_558 HSPC_601 HSPC_607 HSPC_613 HSPC_619 HSPC_625 HSPC_631
#> "033" "01222" "031" "042" "023" "042" "02112" "022" "0412"
#> LT-HSC_157 HSPC_595 HSPC_602 HSPC_608 HSPC_614 HSPC_620 HSPC_626 HSPC_632 LT-HSC_158
#> "023" "031" "022" "022" "042" "022" "023" "02112" "022"
#> HSPC_596 HSPC_603 HSPC_609 HSPC_615 HSPC_621 HSPC_627 HSPC_633 LT-HSC_159 HSPC_597
#> "042" "032" "023" "023" "02111" "042" "023" "0411" "042"
#> HSPC_604 HSPC_610 HSPC_616 HSPC_622 HSPC_628 HSPC_634 LT-HSC_160 HSPC_598 HSPC_605
#> "022" "022" "02111" "02111" "042" "042" "023" "042" "0213"
#> HSPC_611 HSPC_617 HSPC_623 HSPC_629 HSPC_635 LT-HSC_161 HSPC_599 HSPC_606 HSPC_612
#> "02112" "032" "042" "042" "042" "023" "022" "031" "031"
#> HSPC_618 HSPC_624 HSPC_630 HSPC_636 LT-HSC_162 HSPC_600 Prog_601 Prog_607 Prog_613
#> "022" "032" "022" "031" "023" "023" "02112" "01213" "033"
#> Prog_619 Prog_625 Prog_631 LT-HSC_163 Prog_595 Prog_602 Prog_608 Prog_614 Prog_620
#> "022" "0413" "032" "022" "022" "0132" "01122" "0132" "042"
#> Prog_626 Prog_632 LT-HSC_164 Prog_596 Prog_603 Prog_609 Prog_615 Prog_621 Prog_627
#> "01211" "01222" "031" "033" "01122" "01212" "0411" "01212" "031"
#> Prog_633 LT-HSC_165 Prog_597 Prog_604 Prog_610 Prog_616 Prog_622 Prog_628 Prog_634
#> "043" "022" "033" "033" "033" "01112" "01213" "01212" "043"
#> LT-HSC_166 Prog_598 Prog_605 Prog_611 Prog_617 Prog_623 Prog_629 Prog_635 LT-HSC_167
#> "042" "01212" "0141" "033" "031" "0132" "01221" "033" "022"
#> Prog_599 Prog_606 Prog_612 Prog_618 Prog_624 Prog_630 Prog_636 LT-HSC_168 Prog_600
#> "01222" "031" "01311" "01222" "01222" "01312" "0213" "01311" "01222"
#> HSPC_643 HSPC_649 HSPC_655 HSPC_661 HSPC_667 HSPC_673 LT-HSC_169 HSPC_637 HSPC_644
#> "042" "032" "02121" "042" "022" "022" "023" "031" "0132"
#> HSPC_650 HSPC_656 HSPC_662 HSPC_668 HSPC_674 LT-HSC_170 HSPC_638 HSPC_645 HSPC_651
#> "02112" "022" "022" "032" "031" "042" "0132" "032" "0411"
#> HSPC_657 HSPC_663 HSPC_669 HSPC_675 LT-HSC_171 HSPC_639 HSPC_646 HSPC_652 HSPC_658
#> "023" "0412" "022" "02121" "042" "031" "031" "042" "0412"
#> HSPC_664 HSPC_670 HSPC_676 LT-HSC_172 HSPC_640 HSPC_647 HSPC_653 HSPC_659 HSPC_665
#> "032" "023" "022" "022" "031" "022" "02111" "02112" "042"
#> HSPC_671 HSPC_677 LT-HSC_173 HSPC_641 HSPC_648 HSPC_654 HSPC_660 HSPC_666 HSPC_672
#> "032" "023" "022" "031" "022" "042" "043" "0413" "032"
#> HSPC_678 LT-HSC_174 HSPC_642 Prog_643 Prog_649 Prog_655 Prog_661 Prog_667 Prog_673
#> "022" "031" "02112" "0412" "01121" "01121" "01312" "043" "042"
#> LT-HSC_175 Prog_637 Prog_644 Prog_650 Prog_656 Prog_662 Prog_668 Prog_674 LT-HSC_176
#> "02111" "0141" "033" "01212" "033" "033" "023" "033" "022"
#> Prog_638 Prog_645 Prog_651 Prog_657 Prog_663 Prog_669 Prog_675 LT-HSC_177 Prog_639
#> "01122" "043" "031" "01112" "01122" "023" "01223" "022" "0142"
#> Prog_646 Prog_652 Prog_658 Prog_664 Prog_670 Prog_676 LT-HSC_178 Prog_640 Prog_647
#> "01223" "01222" "01213" "023" "01211" "033" "02112" "01113" "043"
#> Prog_653 Prog_659 Prog_665 Prog_671 Prog_677 LT-HSC_179 Prog_641 Prog_648 Prog_654
#> "043" "033" "031" "031" "01121" "031" "023" "042" "0132"
#> Prog_660 Prog_666 Prog_672 Prog_678 LT-HSC_180 Prog_642 HSPC_685 HSPC_691 HSPC_697
#> "031" "033" "031" "0411" "043" "032" "0213" "02121" "0413"
#> HSPC_703 HSPC_709 HSPC_715 LT-HSC_181 HSPC_679 HSPC_686 HSPC_692 HSPC_698 HSPC_704
#> "022" "023" "02122" "02121" "031" "02112" "023" "022" "022"
#> HSPC_710 HSPC_716 LT-HSC_182 HSPC_680 HSPC_687 HSPC_693 HSPC_699 HSPC_705 HSPC_711
#> "02111" "022" "0213" "022" "023" "023" "022" "01213" "02111"
#> HSPC_717 LT-HSC_183 HSPC_681 HSPC_688 HSPC_694 HSPC_700 HSPC_706 HSPC_712 HSPC_718
#> "0412" "031" "042" "02111" "02111" "0413" "033" "02111" "02111"
#> LT-HSC_184 HSPC_682 HSPC_689 HSPC_695 HSPC_701 HSPC_707 HSPC_713 HSPC_719 LT-HSC_185
#> "031" "01213" "022" "0132" "042" "042" "02121" "022" "023"
#> HSPC_683 HSPC_690 HSPC_696 HSPC_702 HSPC_708 HSPC_714 HSPC_720 LT-HSC_186 HSPC_684
#> "0412" "022" "043" "022" "031" "022" "01213" "02111" "023"
#> Prog_685 Prog_691 Prog_697 Prog_703 Prog_709 Prog_715 LT-HSC_187 Prog_679 Prog_686
#> "01211" "0213" "01122" "043" "0141" "01212" "031" "01223" "0413"
#> Prog_692 Prog_698 Prog_704 Prog_710 Prog_716 LT-HSC_188 Prog_680 Prog_687 Prog_693
#> "032" "01312" "031" "031" "033" "031" "01221" "01212" "01221"
#> Prog_699 Prog_705 Prog_711 Prog_717 LT-HSC_189 Prog_681 Prog_688 Prog_694 Prog_700
#> "01213" "01213" "033" "01212" "02111" "01312" "01122" "033" "01112"
#> Prog_706 Prog_712 Prog_718 LT-HSC_190 Prog_682 Prog_689 Prog_695 Prog_701 Prog_707
#> "01311" "0132" "01222" "023" "0132" "033" "01111" "01112" "033"
#> Prog_713 Prog_719 LT-HSC_191 Prog_683 Prog_690 Prog_696 Prog_702 Prog_708 Prog_714
#> "01311" "01121" "031" "023" "033" "0411" "0142" "0141" "0141"
#> Prog_720 LT-HSC_192 Prog_684 HSPC_727 HSPC_733 HSPC_739 HSPC_745 HSPC_751 HSPC_757
#> "0141" "01221" "032" "022" "022" "023" "023" "022" "022"
#> LT-HSC_193 HSPC_721 HSPC_728 HSPC_734 HSPC_740 HSPC_746 HSPC_752 HSPC_758 LT-HSC_194
#> "022" "023" "0213" "01213" "022" "023" "023" "032" "022"
#> HSPC_722 HSPC_729 HSPC_735 HSPC_741 HSPC_747 HSPC_753 HSPC_759 LT-HSC_195 HSPC_723
#> "031" "031" "042" "02112" "022" "031" "032" "032" "032"
#> HSPC_730 HSPC_736 HSPC_742 HSPC_748 HSPC_754 HSPC_760 LT-HSC_196 HSPC_724 HSPC_731
#> "031" "032" "032" "022" "0213" "042" "02111" "032" "0412"
#> HSPC_737 HSPC_743 HSPC_749 HSPC_755 HSPC_761 LT-HSC_197 HSPC_725 HSPC_732 HSPC_738
#> "01212" "031" "022" "031" "032" "022" "023" "032" "022"
#> HSPC_744 HSPC_750 HSPC_756 HSPC_762 LT-HSC_198 HSPC_726 Prog_727 Prog_733 Prog_739
#> "042" "031" "022" "042" "022" "0213" "01213" "033" "0412"
#> Prog_745 Prog_751 Prog_757 LT-HSC_199 Prog_721 Prog_728 Prog_734 Prog_740 Prog_746
#> "033" "033" "0412" "02112" "0141" "032" "0142" "033" "0411"
#> Prog_752 Prog_758 LT-HSC_200 Prog_722 Prog_729 Prog_735 Prog_741 Prog_747 Prog_753
#> "033" "033" "022" "0142" "023" "01213" "0213" "033" "01311"
#> Prog_759 LT-HSC_201 Prog_723 Prog_730 Prog_736 Prog_742 Prog_748 Prog_754 Prog_760
#> "01212" "022" "01122" "01121" "01311" "0213" "0413" "01312" "01222"
#> LT-HSC_202 Prog_724 Prog_731 Prog_737 Prog_743 Prog_749 Prog_755 Prog_761 LT-HSC_203
#> "031" "033" "01121" "031" "01213" "043" "0213" "0412" "0213"
#> Prog_725 Prog_732 Prog_738 Prog_744 Prog_750 Prog_756 Prog_762 LT-HSC_204 Prog_726
#> "031" "043" "033" "033" "0413" "043" "031" "032" "031"
#> HSPC_769 HSPC_775 HSPC_781 HSPC_787 HSPC_793 HSPC_799 LT-HSC_205 HSPC_763 HSPC_770
#> "023" "023" "022" "023" "02121" "023" "023" "02121" "042"
#> HSPC_776 HSPC_782 HSPC_788 HSPC_794 HSPC_800 LT-HSC_206 HSPC_764 HSPC_771 HSPC_777
#> "023" "022" "023" "032" "0413" "022" "022" "032" "032"
#> HSPC_783 HSPC_789 HSPC_795 HSPC_801 LT-HSC_207 HSPC_765 HSPC_772 HSPC_778 HSPC_784
#> "022" "042" "032" "031" "042" "023" "042" "031" "031"
#> HSPC_790 HSPC_796 HSPC_802 LT-HSC_208 HSPC_766 HSPC_773 HSPC_779 HSPC_785 HSPC_791
#> "042" "01212" "022" "022" "01221" "032" "042" "031" "043"
#> HSPC_797 HSPC_803 LT-HSC_209 HSPC_767 HSPC_774 HSPC_780 HSPC_786 HSPC_792 HSPC_798
#> "032" "022" "02112" "01221" "032" "031" "031" "0213" "022"
#> HSPC_804 LT-HSC_210 HSPC_768 Prog_769 Prog_775 Prog_781 Prog_787 Prog_793 Prog_799
#> "022" "022" "023" "01223" "033" "01223" "043" "0132" "033"
#> LT-HSC_211 Prog_763 Prog_770 Prog_776 Prog_782 Prog_788 Prog_794 Prog_800 LT-HSC_212
#> "042" "01221" "0142" "01121" "01221" "01122" "01222" "01223" "031"
#> Prog_764 Prog_771 Prog_777 Prog_783 Prog_789 Prog_795 Prog_801 LT-HSC_213 Prog_765
#> "01223" "0142" "01211" "0141" "01211" "01211" "0132" "022" "01311"
#> Prog_772 Prog_778 Prog_784 Prog_790 Prog_796 Prog_802 LT-HSC_214 Prog_766 Prog_773
#> "01223" "023" "032" "01121" "0412" "0141" "031" "02122" "02122"
#> Prog_779 Prog_785 Prog_791 Prog_797 Prog_803 LT-HSC_215 Prog_767 Prog_774 Prog_780
#> "01311" "033" "01211" "031" "043" "032" "01113" "01212" "01113"
#> Prog_786 Prog_792 Prog_798 Prog_804 LT-HSC_216 Prog_768 HSPC_811 HSPC_817 HSPC_823
#> "01113" "01312" "01311" "01212" "0411" "01221" "02122" "02122" "02121"
#> HSPC_829 HSPC_835 HSPC_841 HSPC_847 HSPC_805 HSPC_812 HSPC_818 HSPC_824 HSPC_830
#> "0213" "032" "043" "023" "02122" "01221" "031" "031" "02121"
#> HSPC_836 HSPC_842 HSPC_848 HSPC_806 HSPC_813 HSPC_819 HSPC_825 HSPC_831 HSPC_837
#> "023" "023" "022" "023" "01221" "042" "031" "031" "0412"
#> HSPC_843 HSPC_849 HSPC_807 HSPC_814 HSPC_820 HSPC_826 HSPC_832 HSPC_838 HSPC_844
#> "031" "022" "01212" "0413" "01221" "031" "032" "032" "022"
#> HSPC_850 HSPC_808 HSPC_815 HSPC_821 HSPC_827 HSPC_833 HSPC_839 HSPC_845 HSPC_851
#> "02111" "01221" "032" "042" "022" "01221" "0413" "031" "023"
#> HSPC_809 HSPC_816 HSPC_822 HSPC_828 HSPC_834 HSPC_840 HSPC_846 HSPC_852 HSPC_810
#> "022" "042" "031" "032" "032" "022" "042" "022" "022"
#> Prog_811 Prog_817 Prog_823 Prog_829 Prog_835 Prog_841 Prog_847 Prog_805 Prog_812
#> "0142" "0132" "031" "01212" "0141" "0411" "01223" "042" "023"
#> Prog_818 Prog_824 Prog_830 Prog_836 Prog_842 Prog_848 Prog_806 Prog_813 Prog_819
#> "0142" "01223" "01122" "01311" "0141" "022" "033" "01121" "01121"
#> Prog_825 Prog_831 Prog_837 Prog_843 Prog_849 Prog_807 Prog_814 Prog_820 Prog_826
#> "01113" "0141" "0141" "01312" "042" "0141" "01121" "0132" "01122"
#> Prog_832 Prog_838 Prog_844 Prog_850 Prog_808 Prog_815 Prog_821 Prog_827 Prog_833
#> "01211" "01121" "0141" "0142" "01212" "0141" "01113" "033" "01221"
#> Prog_839 Prog_845 Prog_851 Prog_809 Prog_816 Prog_822 Prog_828 Prog_834 Prog_840
#> "01311" "01311" "033" "0132" "01223" "01113" "01113" "01212" "01212"
#> Prog_846 Prog_852 Prog_810
#> "01211" "0411" "01311"
get_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 871))
#> HSPC_007 HSPC_013 HSPC_019 HSPC_025 HSPC_031 HSPC_037 LT-HSC_001 HSPC_001 HSPC_008
#> "0213" "023" "02112" "042" "032" "042" "023" "01221" "042"
#> HSPC_014 HSPC_020 HSPC_026 HSPC_032 HSPC_038 LT-HSC_002 HSPC_002 HSPC_009 HSPC_015
#> "022" "042" "0412" "02111" "022" "042" "022" "022" "023"
#> HSPC_021 HSPC_027 HSPC_033 HSPC_039 LT-HSC_003 HSPC_003 HSPC_010 HSPC_016 HSPC_022
#> "022" "033" "031" "02112" "023" "01213" "0213" "01221" "0412"
#> HSPC_028 HSPC_034 HSPC_040 LT-HSC_004 HSPC_004 HSPC_011 HSPC_017 HSPC_023 HSPC_029
#> "031" "01213" "032" "022" "031" "042" "022" "042" "02112"
#> HSPC_035 HSPC_041 LT-HSC_005 HSPC_005 HSPC_012 HSPC_018 HSPC_024 HSPC_030 HSPC_036
#> "022" "042" "02112" "02112" "042" "042" "022" "031" "01212"
#> HSPC_042 LT-HSC_006 HSPC_006 Prog_007 Prog_013 Prog_019 Prog_025 Prog_031 Prog_037
#> "032" "022" "0412" "01223" "01212" "01312" "0411" "033" "033"
#> LT-HSC_007 Prog_001 Prog_008 Prog_014 Prog_020 Prog_026 Prog_032 Prog_038 LT-HSC_008
#> "042" "043" "01112" "01121" "014" "033" "014" "014" "031"
#> Prog_002 Prog_009 Prog_015 Prog_021 Prog_027 Prog_033 Prog_039 LT-HSC_009 Prog_003
#> "01213" "01112" "01212" "014" "01222" "01121" "01112" "022" "01222"
#> Prog_010 Prog_016 Prog_022 Prog_028 Prog_034 Prog_040 LT-HSC_010 Prog_004 Prog_011
#> "0412" "0411" "0411" "01122" "02112" "042" "0412" "033" "014"
#> Prog_017 Prog_023 Prog_029 Prog_035 Prog_041 LT-HSC_011 Prog_005 Prog_012 Prog_018
#> "01211" "01222" "014" "01111" "0213" "0213" "0213" "022" "022"
#> Prog_024 Prog_030 Prog_036 Prog_042 LT-HSC_012 Prog_006 HSPC_049 HSPC_055 HSPC_061
#> "014" "0411" "0412" "0411" "0411" "01111" "031" "042" "042"
#> HSPC_067 HSPC_073 HSPC_079 LT-HSC_013 HSPC_043 HSPC_050 HSPC_056 HSPC_062 HSPC_068
#> "042" "022" "0412" "022" "042" "043" "022" "0413" "022"
#> HSPC_074 HSPC_080 LT-HSC_014 HSPC_044 HSPC_051 HSPC_057 HSPC_063 HSPC_069 HSPC_075
#> "022" "032" "022" "043" "032" "022" "0412" "032" "022"
#> HSPC_081 LT-HSC_015 HSPC_045 HSPC_052 HSPC_058 HSPC_064 HSPC_070 HSPC_076 HSPC_082
#> "032" "022" "042" "043" "031" "0413" "033" "032" "042"
#> LT-HSC_016 HSPC_046 HSPC_053 HSPC_059 HSPC_065 HSPC_071 HSPC_077 HSPC_083 LT-HSC_017
#> "022" "032" "01212" "02112" "032" "0413" "01212" "022" "022"
#> HSPC_047 HSPC_054 HSPC_060 HSPC_066 HSPC_072 HSPC_078 HSPC_084 LT-HSC_018 HSPC_048
#> "023" "031" "031" "031" "0413" "043" "042" "022" "032"
#> Prog_049 Prog_055 Prog_061 Prog_067 Prog_073 Prog_079 LT-HSC_019 Prog_043 Prog_050
#> "01112" "01211" "01121" "014" "032" "01112" "02112" "0132" "01211"
#> Prog_056 Prog_062 Prog_068 Prog_074 Prog_080 LT-HSC_020 Prog_044 Prog_051 Prog_057
#> "01222" "042" "032" "0411" "043" "031" "032" "014" "01312"
#> Prog_063 Prog_069 Prog_075 Prog_081 LT-HSC_021 Prog_045 Prog_052 Prog_058 Prog_064
#> "043" "01222" "01211" "01112" "0413" "0132" "043" "014" "014"
#> Prog_070 Prog_076 Prog_082 LT-HSC_022 Prog_046 Prog_053 Prog_059 Prog_065 Prog_071
#> "0412" "014" "01111" "022" "01122" "01121" "01222" "01312" "01223"
#> Prog_077 Prog_083 LT-HSC_023 Prog_047 Prog_054 Prog_060 Prog_066 Prog_072 Prog_078
#> "01222" "01212" "022" "01211" "0411" "0213" "014" "033" "014"
#> Prog_084 LT-HSC_024 Prog_048 HSPC_091 HSPC_097 HSPC_103 HSPC_109 HSPC_115 HSPC_121
#> "01121" "033" "032" "02122" "023" "022" "043" "022" "023"
#> LT-HSC_025 HSPC_085 HSPC_092 HSPC_098 HSPC_104 HSPC_110 HSPC_116 HSPC_122 LT-HSC_026
#> "02121" "042" "02121" "043" "023" "043" "02111" "031" "022"
#> HSPC_086 HSPC_093 HSPC_099 HSPC_105 HSPC_111 HSPC_117 HSPC_123 LT-HSC_027 HSPC_087
#> "02112" "02112" "042" "022" "022" "042" "022" "023" "022"
#> HSPC_094 HSPC_100 HSPC_106 HSPC_112 HSPC_118 HSPC_124 LT-HSC_028 HSPC_088 HSPC_095
#> "01221" "032" "022" "02111" "031" "02111" "032" "032" "022"
#> HSPC_101 HSPC_107 HSPC_113 HSPC_119 HSPC_125 LT-HSC_029 HSPC_089 HSPC_096 HSPC_102
#> "01213" "042" "023" "023" "031" "02122" "032" "043" "01211"
#> HSPC_108 HSPC_114 HSPC_120 HSPC_126 LT-HSC_030 HSPC_090 Prog_091 Prog_097 Prog_103
#> "031" "032" "031" "032" "02121" "01221" "01111" "01211" "01221"
#> Prog_109 Prog_115 Prog_121 LT-HSC_031 Prog_085 Prog_092 Prog_098 Prog_104 Prog_110
#> "0412" "014" "0213" "032" "01222" "033" "01121" "02111" "01112"
#> Prog_116 Prog_122 LT-HSC_032 Prog_086 Prog_093 Prog_099 Prog_105 Prog_111 Prog_117
#> "01221" "033" "01111" "02122" "01223" "01222" "01211" "014" "0132"
#> Prog_123 LT-HSC_033 Prog_087 Prog_094 Prog_100 Prog_106 Prog_112 Prog_118 Prog_124
#> "01211" "031" "01211" "014" "01121" "031" "01112" "0412" "033"
#> LT-HSC_034 Prog_088 Prog_095 Prog_101 Prog_107 Prog_113 Prog_119 Prog_125 LT-HSC_035
#> "031" "043" "01122" "01312" "01112" "01223" "01111" "031" "02122"
#> Prog_089 Prog_096 Prog_102 Prog_108 Prog_114 Prog_120 Prog_126 LT-HSC_036 Prog_090
#> "014" "032" "031" "0411" "0413" "023" "014" "033" "01121"
#> HSPC_133 HSPC_139 HSPC_145 HSPC_151 HSPC_157 HSPC_163 LT-HSC_037 HSPC_127 HSPC_134
#> "022" "022" "023" "042" "043" "023" "023" "0412" "023"
#> HSPC_140 HSPC_146 HSPC_152 HSPC_158 HSPC_164 LT-HSC_038 HSPC_128 HSPC_135 HSPC_141
#> "023" "0412" "022" "042" "022" "023" "023" "031" "022"
#> HSPC_147 HSPC_153 HSPC_159 HSPC_165 LT-HSC_039 HSPC_129 HSPC_136 HSPC_142 HSPC_148
#> "023" "022" "042" "043" "022" "02111" "042" "042" "043"
#> HSPC_154 HSPC_160 HSPC_166 LT-HSC_040 HSPC_130 HSPC_137 HSPC_143 HSPC_149 HSPC_155
#> "043" "02112" "042" "022" "042" "02111" "022" "022" "023"
#> HSPC_161 HSPC_167 LT-HSC_041 HSPC_131 HSPC_138 HSPC_144 HSPC_150 HSPC_156 HSPC_162
#> "042" "023" "022" "022" "01221" "031" "02111" "01221" "032"
#> HSPC_168 LT-HSC_042 HSPC_132 Prog_133 Prog_139 Prog_145 Prog_151 Prog_157 Prog_163
#> "0413" "022" "0132" "01211" "01121" "01213" "032" "01222" "01113"
#> LT-HSC_043 Prog_127 Prog_134 Prog_140 Prog_146 Prog_152 Prog_158 Prog_164 LT-HSC_044
#> "0132" "032" "043" "01111" "01113" "043" "01112" "0213" "043"
#> Prog_128 Prog_135 Prog_141 Prog_147 Prog_153 Prog_159 Prog_165 LT-HSC_045 Prog_129
#> "01211" "032" "0132" "02112" "01222" "0412" "043" "0412" "01311"
#> Prog_136 Prog_142 Prog_148 Prog_154 Prog_160 Prog_166 LT-HSC_046 Prog_130 Prog_137
#> "0132" "033" "023" "033" "022" "014" "031" "01312" "01222"
#> Prog_143 Prog_149 Prog_155 Prog_161 Prog_167 LT-HSC_047 Prog_131 Prog_138 Prog_144
#> "01312" "0413" "01211" "033" "01212" "0213" "033" "02111" "043"
#> Prog_150 Prog_156 Prog_162 Prog_168 LT-HSC_048 Prog_132 HSPC_175 HSPC_181 HSPC_187
#> "01312" "02122" "0412" "01312" "023" "01312" "042" "022" "022"
#> HSPC_193 HSPC_199 HSPC_205 LT-HSC_049 HSPC_169 HSPC_176 HSPC_182 HSPC_188 HSPC_194
#> "033" "031" "022" "022" "042" "022" "023" "02111" "02112"
#> HSPC_200 HSPC_206 LT-HSC_050 HSPC_170 HSPC_177 HSPC_183 HSPC_189 HSPC_195 HSPC_201
#> "022" "01223" "022" "023" "022" "033" "031" "01213" "02112"
#> HSPC_207 LT-HSC_051 HSPC_171 HSPC_178 HSPC_184 HSPC_190 HSPC_196 HSPC_202 HSPC_208
#> "032" "022" "022" "031" "02121" "0413" "042" "032" "022"
#> LT-HSC_052 HSPC_172 HSPC_179 HSPC_185 HSPC_191 HSPC_197 HSPC_203 HSPC_209 LT-HSC_053
#> "01221" "01221" "01221" "023" "022" "02112" "042" "02112" "02112"
#> HSPC_173 HSPC_180 HSPC_186 HSPC_192 HSPC_198 HSPC_204 HSPC_210 LT-HSC_054 HSPC_174
#> "023" "043" "033" "022" "031" "0412" "043" "022" "031"
#> Prog_175 Prog_181 Prog_187 Prog_193 Prog_199 Prog_205 LT-HSC_055 Prog_169 Prog_176
#> "0411" "02112" "033" "042" "032" "0413" "0132" "02112" "01221"
#> Prog_182 Prog_188 Prog_194 Prog_200 Prog_206 LT-HSC_056 Prog_170 Prog_177 Prog_183
#> "043" "014" "023" "043" "01222" "01312" "01112" "042" "0132"
#> Prog_189 Prog_195 Prog_201 Prog_207 LT-HSC_057 Prog_171 Prog_178 Prog_184 Prog_190
#> "01222" "042" "0412" "014" "031" "042" "01121" "01312" "01211"
#> Prog_196 Prog_202 Prog_208 LT-HSC_058 Prog_172 Prog_179 Prog_185 Prog_191 Prog_197
#> "01111" "0213" "033" "032" "014" "01311" "01111" "033" "01312"
#> Prog_203 Prog_209 LT-HSC_059 Prog_173 Prog_180 Prog_186 Prog_192 Prog_198 Prog_204
#> "0132" "01311" "02122" "043" "032" "01223" "01211" "02112" "023"
#> Prog_210 LT-HSC_060 Prog_174 HSPC_217 HSPC_223 HSPC_229 HSPC_235 HSPC_241 HSPC_247
#> "032" "01311" "0213" "02122" "022" "023" "022" "02112" "023"
#> LT-HSC_061 HSPC_211 HSPC_218 HSPC_224 HSPC_230 HSPC_236 HSPC_242 HSPC_248 LT-HSC_062
#> "02121" "042" "022" "022" "042" "043" "023" "022" "023"
#> HSPC_212 HSPC_219 HSPC_225 HSPC_231 HSPC_237 HSPC_243 HSPC_249 LT-HSC_063 HSPC_213
#> "023" "042" "022" "023" "022" "0412" "022" "033" "0413"
#> HSPC_220 HSPC_226 HSPC_232 HSPC_238 HSPC_244 HSPC_250 LT-HSC_064 HSPC_214 HSPC_221
#> "022" "02112" "023" "02122" "032" "0413" "01121" "01213" "031"
#> HSPC_227 HSPC_233 HSPC_239 HSPC_245 HSPC_251 LT-HSC_065 HSPC_215 HSPC_222 HSPC_228
#> "022" "042" "022" "022" "0413" "031" "0412" "042" "023"
#> HSPC_234 HSPC_240 HSPC_246 HSPC_252 LT-HSC_066 HSPC_216 Prog_217 Prog_223 Prog_229
#> "02112" "031" "022" "0213" "031" "01213" "01111" "042" "01112"
#> Prog_235 Prog_241 Prog_247 LT-HSC_067 Prog_211 Prog_218 Prog_224 Prog_230 Prog_236
#> "023" "022" "033" "0213" "01121" "01222" "0132" "0413" "01213"
#> Prog_242 Prog_248 LT-HSC_068 Prog_212 Prog_219 Prog_225 Prog_231 Prog_237 Prog_243
#> "014" "043" "01221" "014" "0213" "033" "0132" "042" "01312"
#> Prog_249 LT-HSC_069 Prog_213 Prog_220 Prog_226 Prog_232 Prog_238 Prog_244 Prog_250
#> "01111" "032" "043" "0213" "031" "033" "01211" "032" "014"
#> LT-HSC_070 Prog_214 Prog_221 Prog_227 Prog_233 Prog_239 Prog_245 Prog_251 LT-HSC_071
#> "043" "0413" "01111" "0132" "01222" "01111" "01211" "02122" "032"
#> Prog_215 Prog_222 Prog_228 Prog_234 Prog_240 Prog_246 Prog_252 LT-HSC_072 Prog_216
#> "01113" "032" "01311" "01212" "01221" "033" "032" "01211" "01113"
#> HSPC_259 HSPC_265 HSPC_271 HSPC_277 HSPC_283 HSPC_289 LT-HSC_073 HSPC_253 HSPC_260
#> "023" "022" "0412" "023" "022" "022" "023" "0413" "02112"
#> HSPC_266 HSPC_272 HSPC_278 HSPC_284 HSPC_290 LT-HSC_074 HSPC_254 HSPC_261 HSPC_267
#> "022" "02112" "042" "02112" "0413" "022" "022" "0132" "031"
#> HSPC_273 HSPC_279 HSPC_285 HSPC_291 LT-HSC_075 HSPC_255 HSPC_262 HSPC_268 HSPC_274
#> "02112" "043" "01213" "033" "031" "032" "02121" "01212" "022"
#> HSPC_280 HSPC_286 HSPC_292 LT-HSC_076 HSPC_256 HSPC_263 HSPC_269 HSPC_275 HSPC_281
#> "0412" "042" "0412" "042" "01121" "0412" "0132" "01312" "023"
#> HSPC_287 HSPC_293 LT-HSC_077 HSPC_257 HSPC_264 HSPC_270 HSPC_276 HSPC_282 HSPC_288
#> "0413" "0412" "023" "0413" "022" "032" "032" "01212" "01212"
#> HSPC_294 LT-HSC_078 HSPC_258 Prog_259 Prog_265 Prog_271 Prog_277 Prog_283 Prog_289
#> "0413" "022" "01222" "031" "01121" "033" "031" "042" "0412"
#> LT-HSC_079 Prog_253 Prog_260 Prog_266 Prog_272 Prog_278 Prog_284 Prog_290 LT-HSC_080
#> "02112" "014" "01223" "01221" "01223" "01121" "014" "01122" "032"
#> Prog_254 Prog_261 Prog_267 Prog_273 Prog_279 Prog_285 Prog_291 LT-HSC_081 Prog_255
#> "01121" "014" "01311" "01312" "01112" "014" "0411" "01221" "01211"
#> Prog_262 Prog_268 Prog_274 Prog_280 Prog_286 Prog_292 LT-HSC_082 Prog_256 Prog_263
#> "01223" "01223" "014" "033" "01121" "01222" "032" "042" "01311"
#> Prog_269 Prog_275 Prog_281 Prog_287 Prog_293 LT-HSC_083 Prog_257 Prog_264 Prog_270
#> "01122" "01223" "014" "01312" "033" "02121" "0213" "023" "01311"
#> Prog_276 Prog_282 Prog_288 Prog_294 LT-HSC_084 Prog_258 HSPC_301 HSPC_307 HSPC_313
#> "01212" "01113" "01122" "01222" "033" "0132" "023" "022" "042"
#> HSPC_319 HSPC_325 HSPC_331 LT-HSC_085 HSPC_295 HSPC_302 HSPC_308 HSPC_314 HSPC_320
#> "02122" "022" "022" "022" "0413" "023" "043" "042" "043"
#> HSPC_326 HSPC_332 LT-HSC_086 HSPC_296 HSPC_303 HSPC_309 HSPC_315 HSPC_321 HSPC_327
#> "022" "01211" "042" "022" "01221" "022" "022" "042" "01212"
#> HSPC_333 LT-HSC_087 HSPC_297 HSPC_304 HSPC_310 HSPC_316 HSPC_322 HSPC_328 HSPC_334
#> "01213" "02122" "022" "032" "022" "023" "031" "042" "022"
#> LT-HSC_088 HSPC_298 HSPC_305 HSPC_311 HSPC_317 HSPC_323 HSPC_329 HSPC_335 LT-HSC_089
#> "043" "032" "0412" "02122" "023" "031" "042" "022" "022"
#> HSPC_299 HSPC_306 HSPC_312 HSPC_318 HSPC_324 HSPC_330 HSPC_336 LT-HSC_090 HSPC_300
#> "033" "033" "0413" "022" "031" "031" "022" "032" "01221"
#> Prog_301 Prog_307 Prog_313 Prog_319 Prog_325 Prog_331 LT-HSC_091 Prog_295 Prog_302
#> "0411" "0412" "0413" "0132" "01211" "01212" "01111" "0412" "02122"
#> Prog_308 Prog_314 Prog_320 Prog_326 Prog_332 LT-HSC_092 Prog_296 Prog_303 Prog_309
#> "01223" "033" "01221" "01111" "01222" "02122" "01222" "022" "022"
#> Prog_315 Prog_321 Prog_327 Prog_333 LT-HSC_093 Prog_297 Prog_304 Prog_310 Prog_316
#> "0411" "0411" "01211" "043" "042" "043" "01211" "0412" "0411"
#> Prog_322 Prog_328 Prog_334 LT-HSC_094 Prog_298 Prog_305 Prog_311 Prog_317 Prog_323
#> "043" "0411" "014" "042" "014" "0413" "043" "02122" "0411"
#> Prog_329 Prog_335 LT-HSC_095 Prog_299 Prog_306 Prog_312 Prog_318 Prog_324 Prog_330
#> "0411" "0413" "01112" "01121" "022" "01111" "01111" "01122" "0132"
#> Prog_336 LT-HSC_096 Prog_300 HSPC_343 HSPC_349 HSPC_355 HSPC_361 HSPC_367 HSPC_373
#> "0132" "01212" "01311" "0132" "031" "0213" "023" "022" "023"
#> LT-HSC_097 HSPC_337 HSPC_344 HSPC_350 HSPC_356 HSPC_362 HSPC_368 HSPC_374 LT-HSC_098
#> "02121" "022" "0412" "022" "043" "0411" "042" "032" "01122"
#> HSPC_338 HSPC_345 HSPC_351 HSPC_357 HSPC_363 HSPC_369 HSPC_375 LT-HSC_099 HSPC_339
#> "01112" "043" "043" "02111" "022" "02111" "02111" "023" "032"
#> HSPC_346 HSPC_352 HSPC_358 HSPC_364 HSPC_370 HSPC_376 LT-HSC_100 HSPC_340 HSPC_347
#> "01213" "0412" "042" "042" "01312" "042" "01112" "0213" "02112"
#> HSPC_353 HSPC_359 HSPC_365 HSPC_371 HSPC_377 LT-HSC_101 HSPC_341 HSPC_348 HSPC_354
#> "01212" "032" "023" "01212" "0413" "0411" "01221" "033" "022"
#> HSPC_360 HSPC_366 HSPC_372 HSPC_378 LT-HSC_102 HSPC_342 Prog_343 Prog_349 Prog_355
#> "042" "0213" "042" "02121" "01112" "01311" "0132" "0411" "0413"
#> Prog_361 Prog_367 Prog_373 LT-HSC_103 Prog_337 Prog_344 Prog_350 Prog_356 Prog_362
#> "014" "01312" "01113" "0132" "01111" "02112" "014" "01121" "0412"
#> Prog_368 Prog_374 LT-HSC_104 Prog_338 Prog_345 Prog_351 Prog_357 Prog_363 Prog_369
#> "014" "014" "02122" "01221" "0411" "014" "01112" "014" "0411"
#> Prog_375 LT-HSC_105 Prog_339 Prog_346 Prog_352 Prog_358 Prog_364 Prog_370 Prog_376
#> "01112" "0411" "01122" "014" "01112" "031" "01122" "0411" "01121"
#> LT-HSC_106 Prog_340 Prog_347 Prog_353 Prog_359 Prog_365 Prog_371 Prog_377 LT-HSC_107
#> "0412" "014" "0213" "0132" "01122" "0213" "01212" "01111" "023"
#> Prog_341 Prog_348 Prog_354 Prog_360 Prog_366 Prog_372 Prog_378 LT-HSC_108 Prog_342
#> "01212" "02121" "0412" "01112" "014" "01121" "032" "01211" "01112"
#> HSPC_385 HSPC_391 HSPC_397 HSPC_403 HSPC_409 HSPC_415 HSPC_421 HSPC_379 HSPC_386
#> "02111" "031" "02111" "042" "023" "023" "043" "02121" "042"
#> HSPC_392 HSPC_398 HSPC_404 HSPC_410 HSPC_416 HSPC_422 HSPC_380 HSPC_387 HSPC_393
#> "032" "032" "01121" "01212" "031" "032" "032" "0412" "0411"
#> HSPC_399 HSPC_405 HSPC_411 HSPC_417 HSPC_423 HSPC_381 HSPC_388 HSPC_394 HSPC_400
#> "031" "032" "01212" "01221" "01221" "02112" "01221" "02111" "0412"
#> HSPC_406 HSPC_412 HSPC_418 HSPC_424 HSPC_382 HSPC_389 HSPC_395 HSPC_401 HSPC_407
#> "042" "01312" "031" "0413" "01221" "014" "043" "02111" "01311"
#> HSPC_413 HSPC_419 HSPC_425 HSPC_383 HSPC_390 HSPC_396 HSPC_402 HSPC_408 HSPC_414
#> "042" "01312" "0413" "022" "042" "032" "032" "01111" "02112"
#> HSPC_420 HSPC_426 HSPC_384 Prog_385 Prog_391 Prog_397 Prog_403 Prog_409 Prog_415
#> "01221" "042" "02112" "01111" "0213" "01112" "01121" "01112" "01112"
#> Prog_421 Prog_379 Prog_386 Prog_392 Prog_398 Prog_404 Prog_410 Prog_416 Prog_422
#> "01112" "01122" "01112" "01222" "01112" "01113" "01121" "01121" "0413"
#> Prog_380 Prog_387 Prog_393 Prog_399 Prog_405 Prog_411 Prog_417 Prog_423 Prog_381
#> "01122" "01311" "01121" "01223" "01223" "042" "0411" "0412" "01122"
#> Prog_388 Prog_394 Prog_400 Prog_406 Prog_412 Prog_418 Prog_424 Prog_382 Prog_389
#> "01112" "033" "02111" "01121" "01213" "014" "01121" "031" "0132"
#> Prog_395 Prog_401 Prog_407 Prog_413 Prog_419 Prog_425 Prog_383 Prog_390 Prog_396
#> "01112" "0132" "033" "01212" "01112" "014" "01111" "043" "014"
#> Prog_402 Prog_408 Prog_414 Prog_420 Prog_426 Prog_384 HSPC_433 HSPC_439 HSPC_445
#> "0412" "014" "01312" "01212" "01211" "0411" "02121" "02121" "02121"
#> HSPC_451 HSPC_457 HSPC_463 LT-HSC_109 HSPC_427 HSPC_434 HSPC_440 HSPC_446 HSPC_452
#> "023" "022" "032" "022" "023" "0213" "042" "022" "02111"
#> HSPC_458 HSPC_464 LT-HSC_110 HSPC_428 HSPC_435 HSPC_441 HSPC_447 HSPC_453 HSPC_459
#> "02112" "02112" "031" "02121" "031" "031" "033" "032" "031"
#> HSPC_465 LT-HSC_111 HSPC_429 HSPC_436 HSPC_442 HSPC_448 HSPC_454 HSPC_460 HSPC_466
#> "031" "022" "02111" "0132" "01221" "031" "0132" "031" "042"
#> LT-HSC_112 HSPC_430 HSPC_437 HSPC_443 HSPC_449 HSPC_455 HSPC_461 HSPC_467 LT-HSC_113
#> "032" "031" "02112" "031" "031" "022" "042" "031" "032"
#> HSPC_431 HSPC_438 HSPC_444 HSPC_450 HSPC_456 HSPC_462 HSPC_468 LT-HSC_114 HSPC_432
#> "031" "0213" "022" "022" "01221" "031" "031" "023" "022"
#> Prog_433 Prog_439 Prog_445 Prog_451 Prog_457 Prog_463 LT-HSC_115 Prog_427 Prog_434
#> "031" "033" "032" "01312" "014" "033" "01221" "022" "01111"
#> Prog_440 Prog_446 Prog_452 Prog_458 Prog_464 LT-HSC_116 Prog_428 Prog_435 Prog_441
#> "043" "032" "02121" "043" "032" "031" "01221" "0411" "01211"
#> Prog_447 Prog_453 Prog_459 Prog_465 LT-HSC_117 Prog_429 Prog_436 Prog_442 Prog_448
#> "01223" "014" "033" "043" "031" "01111" "01221" "02112" "033"
#> Prog_454 Prog_460 Prog_466 LT-HSC_118 Prog_430 Prog_437 Prog_443 Prog_449 Prog_455
#> "0412" "042" "0411" "02112" "01121" "0132" "01311" "01111" "031"
#> Prog_461 Prog_467 LT-HSC_119 Prog_431 Prog_438 Prog_444 Prog_450 Prog_456 Prog_462
#> "022" "033" "0213" "033" "022" "01111" "01222" "01223" "042"
#> Prog_468 LT-HSC_120 Prog_432 HSPC_475 HSPC_481 HSPC_487 HSPC_493 HSPC_499 HSPC_505
#> "0411" "0413" "043" "022" "023" "02121" "022" "022" "042"
#> LT-HSC_121 HSPC_469 HSPC_476 HSPC_482 HSPC_488 HSPC_494 HSPC_500 HSPC_506 LT-HSC_122
#> "0213" "023" "02111" "022" "022" "022" "022" "022" "042"
#> HSPC_470 HSPC_477 HSPC_483 HSPC_489 HSPC_495 HSPC_501 HSPC_507 LT-HSC_123 HSPC_471
#> "022" "01221" "022" "042" "043" "023" "022" "022" "022"
#> HSPC_478 HSPC_484 HSPC_490 HSPC_496 HSPC_502 HSPC_508 LT-HSC_124 HSPC_472 HSPC_479
#> "022" "02112" "031" "031" "032" "01311" "031" "032" "031"
#> HSPC_485 HSPC_491 HSPC_497 HSPC_503 HSPC_509 LT-HSC_125 HSPC_473 HSPC_480 HSPC_486
#> "01212" "0412" "022" "01212" "042" "031" "031" "032" "042"
#> HSPC_492 HSPC_498 HSPC_504 HSPC_510 LT-HSC_126 HSPC_474 Prog_475 Prog_481 Prog_487
#> "032" "031" "022" "0412" "032" "032" "01312" "033" "01312"
#> Prog_493 Prog_499 Prog_505 LT-HSC_127 Prog_469 Prog_476 Prog_482 Prog_488 Prog_494
#> "01222" "01212" "01312" "02122" "042" "01213" "01222" "01311" "043"
#> Prog_500 Prog_506 LT-HSC_128 Prog_470 Prog_477 Prog_483 Prog_489 Prog_495 Prog_501
#> "01312" "01211" "031" "01213" "01121" "043" "01211" "032" "01223"
#> Prog_507 LT-HSC_129 Prog_471 Prog_478 Prog_484 Prog_490 Prog_496 Prog_502 Prog_508
#> "0411" "02112" "01222" "01113" "01223" "043" "033" "01121" "01113"
#> LT-HSC_130 Prog_472 Prog_479 Prog_485 Prog_491 Prog_497 Prog_503 Prog_509 LT-HSC_131
#> "0132" "043" "01222" "0132" "01311" "0411" "043" "031" "031"
#> Prog_473 Prog_480 Prog_486 Prog_492 Prog_498 Prog_504 Prog_510 LT-HSC_132 Prog_474
#> "01223" "023" "01211" "031" "0213" "01213" "042" "014" "032"
#> HSPC_517 HSPC_523 HSPC_529 HSPC_535 HSPC_541 HSPC_547 LT-HSC_133 HSPC_511 HSPC_518
#> "023" "032" "02111" "022" "022" "032" "02121" "023" "022"
#> HSPC_524 HSPC_530 HSPC_536 HSPC_542 HSPC_548 LT-HSC_134 HSPC_512 HSPC_519 HSPC_525
#> "022" "022" "02111" "02111" "022" "023" "032" "02112" "023"
#> HSPC_531 HSPC_537 HSPC_543 HSPC_549 LT-HSC_135 HSPC_513 HSPC_520 HSPC_526 HSPC_532
#> "022" "042" "042" "022" "022" "02121" "042" "031" "042"
#> HSPC_538 HSPC_544 HSPC_550 LT-HSC_136 HSPC_514 HSPC_521 HSPC_527 HSPC_533 HSPC_539
#> "031" "01213" "042" "023" "031" "022" "01221" "032" "022"
#> HSPC_545 HSPC_551 LT-HSC_137 HSPC_515 HSPC_522 HSPC_528 HSPC_534 HSPC_540 HSPC_546
#> "022" "042" "022" "031" "022" "0413" "031" "032" "022"
#> HSPC_552 LT-HSC_138 HSPC_516 Prog_517 Prog_523 Prog_529 Prog_535 Prog_541 Prog_547
#> "042" "022" "032" "033" "01122" "01311" "01122" "01311" "0132"
#> LT-HSC_139 Prog_511 Prog_518 Prog_524 Prog_530 Prog_536 Prog_542 Prog_548 LT-HSC_140
#> "031" "031" "0413" "042" "01213" "01122" "0413" "01122" "022"
#> Prog_512 Prog_519 Prog_525 Prog_531 Prog_537 Prog_543 Prog_549 LT-HSC_141 Prog_513
#> "0411" "042" "043" "01312" "022" "014" "0413" "02111" "033"
#> Prog_520 Prog_526 Prog_532 Prog_538 Prog_544 Prog_550 LT-HSC_142 Prog_514 Prog_521
#> "01311" "023" "022" "02121" "023" "01213" "01213" "01223" "01213"
#> Prog_527 Prog_533 Prog_539 Prog_545 Prog_551 LT-HSC_143 Prog_515 Prog_522 Prog_528
#> "01213" "022" "0411" "014" "01212" "0132" "043" "022" "014"
#> Prog_534 Prog_540 Prog_546 Prog_552 LT-HSC_144 Prog_516 HSPC_559 HSPC_565 HSPC_571
#> "043" "023" "023" "0412" "042" "01111" "022" "023" "031"
#> HSPC_577 HSPC_583 HSPC_589 LT-HSC_145 HSPC_553 HSPC_560 HSPC_566 HSPC_572 HSPC_578
#> "022" "02111" "022" "022" "01312" "022" "022" "023" "022"
#> HSPC_584 HSPC_590 LT-HSC_146 HSPC_554 HSPC_561 HSPC_567 HSPC_573 HSPC_579 HSPC_585
#> "022" "042" "031" "022" "02111" "031" "022" "031" "022"
#> HSPC_591 LT-HSC_147 HSPC_555 HSPC_562 HSPC_568 HSPC_574 HSPC_580 HSPC_586 HSPC_592
#> "023" "022" "022" "023" "022" "01213" "032" "032" "031"
#> LT-HSC_148 HSPC_556 HSPC_563 HSPC_569 HSPC_575 HSPC_581 HSPC_587 HSPC_593 LT-HSC_149
#> "042" "032" "031" "0413" "031" "02112" "02112" "022" "022"
#> HSPC_557 HSPC_564 HSPC_570 HSPC_576 HSPC_582 HSPC_588 HSPC_594 LT-HSC_150 HSPC_558
#> "032" "02112" "02112" "022" "022" "02121" "022" "022" "02112"
#> Prog_559 Prog_565 Prog_571 Prog_577 Prog_583 Prog_589 LT-HSC_151 Prog_553 Prog_560
#> "01222" "01213" "01223" "01212" "023" "023" "032" "043" "01211"
#> Prog_566 Prog_572 Prog_578 Prog_584 Prog_590 LT-HSC_152 Prog_554 Prog_561 Prog_567
#> "014" "032" "0413" "01211" "01221" "022" "031" "042" "01212"
#> Prog_573 Prog_579 Prog_585 Prog_591 LT-HSC_153 Prog_555 Prog_562 Prog_568 Prog_574
#> "023" "01223" "033" "023" "022" "031" "01121" "033" "01211"
#> Prog_580 Prog_586 Prog_592 LT-HSC_154 Prog_556 Prog_563 Prog_569 Prog_575 Prog_581
#> "031" "043" "01111" "02112" "033" "0213" "01311" "01113" "01222"
#> Prog_587 Prog_593 LT-HSC_155 Prog_557 Prog_564 Prog_570 Prog_576 Prog_582 Prog_588
#> "0132" "01222" "02111" "01222" "031" "0411" "014" "01223" "031"
#> Prog_594 LT-HSC_156 Prog_558 HSPC_601 HSPC_607 HSPC_613 HSPC_619 HSPC_625 HSPC_631
#> "033" "01222" "031" "042" "023" "042" "02112" "022" "0412"
#> LT-HSC_157 HSPC_595 HSPC_602 HSPC_608 HSPC_614 HSPC_620 HSPC_626 HSPC_632 LT-HSC_158
#> "023" "031" "022" "022" "042" "022" "023" "02112" "022"
#> HSPC_596 HSPC_603 HSPC_609 HSPC_615 HSPC_621 HSPC_627 HSPC_633 LT-HSC_159 HSPC_597
#> "042" "032" "023" "023" "02111" "042" "023" "0411" "042"
#> HSPC_604 HSPC_610 HSPC_616 HSPC_622 HSPC_628 HSPC_634 LT-HSC_160 HSPC_598 HSPC_605
#> "022" "022" "02111" "02111" "042" "042" "023" "042" "0213"
#> HSPC_611 HSPC_617 HSPC_623 HSPC_629 HSPC_635 LT-HSC_161 HSPC_599 HSPC_606 HSPC_612
#> "02112" "032" "042" "042" "042" "023" "022" "031" "031"
#> HSPC_618 HSPC_624 HSPC_630 HSPC_636 LT-HSC_162 HSPC_600 Prog_601 Prog_607 Prog_613
#> "022" "032" "022" "031" "023" "023" "02112" "01213" "033"
#> Prog_619 Prog_625 Prog_631 LT-HSC_163 Prog_595 Prog_602 Prog_608 Prog_614 Prog_620
#> "022" "0413" "032" "022" "022" "0132" "01122" "0132" "042"
#> Prog_626 Prog_632 LT-HSC_164 Prog_596 Prog_603 Prog_609 Prog_615 Prog_621 Prog_627
#> "01211" "01222" "031" "033" "01122" "01212" "0411" "01212" "031"
#> Prog_633 LT-HSC_165 Prog_597 Prog_604 Prog_610 Prog_616 Prog_622 Prog_628 Prog_634
#> "043" "022" "033" "033" "033" "01112" "01213" "01212" "043"
#> LT-HSC_166 Prog_598 Prog_605 Prog_611 Prog_617 Prog_623 Prog_629 Prog_635 LT-HSC_167
#> "042" "01212" "014" "033" "031" "0132" "01221" "033" "022"
#> Prog_599 Prog_606 Prog_612 Prog_618 Prog_624 Prog_630 Prog_636 LT-HSC_168 Prog_600
#> "01222" "031" "01311" "01222" "01222" "01312" "0213" "01311" "01222"
#> HSPC_643 HSPC_649 HSPC_655 HSPC_661 HSPC_667 HSPC_673 LT-HSC_169 HSPC_637 HSPC_644
#> "042" "032" "02121" "042" "022" "022" "023" "031" "0132"
#> HSPC_650 HSPC_656 HSPC_662 HSPC_668 HSPC_674 LT-HSC_170 HSPC_638 HSPC_645 HSPC_651
#> "02112" "022" "022" "032" "031" "042" "0132" "032" "0411"
#> HSPC_657 HSPC_663 HSPC_669 HSPC_675 LT-HSC_171 HSPC_639 HSPC_646 HSPC_652 HSPC_658
#> "023" "0412" "022" "02121" "042" "031" "031" "042" "0412"
#> HSPC_664 HSPC_670 HSPC_676 LT-HSC_172 HSPC_640 HSPC_647 HSPC_653 HSPC_659 HSPC_665
#> "032" "023" "022" "022" "031" "022" "02111" "02112" "042"
#> HSPC_671 HSPC_677 LT-HSC_173 HSPC_641 HSPC_648 HSPC_654 HSPC_660 HSPC_666 HSPC_672
#> "032" "023" "022" "031" "022" "042" "043" "0413" "032"
#> HSPC_678 LT-HSC_174 HSPC_642 Prog_643 Prog_649 Prog_655 Prog_661 Prog_667 Prog_673
#> "022" "031" "02112" "0412" "01121" "01121" "01312" "043" "042"
#> LT-HSC_175 Prog_637 Prog_644 Prog_650 Prog_656 Prog_662 Prog_668 Prog_674 LT-HSC_176
#> "02111" "014" "033" "01212" "033" "033" "023" "033" "022"
#> Prog_638 Prog_645 Prog_651 Prog_657 Prog_663 Prog_669 Prog_675 LT-HSC_177 Prog_639
#> "01122" "043" "031" "01112" "01122" "023" "01223" "022" "014"
#> Prog_646 Prog_652 Prog_658 Prog_664 Prog_670 Prog_676 LT-HSC_178 Prog_640 Prog_647
#> "01223" "01222" "01213" "023" "01211" "033" "02112" "01113" "043"
#> Prog_653 Prog_659 Prog_665 Prog_671 Prog_677 LT-HSC_179 Prog_641 Prog_648 Prog_654
#> "043" "033" "031" "031" "01121" "031" "023" "042" "0132"
#> Prog_660 Prog_666 Prog_672 Prog_678 LT-HSC_180 Prog_642 HSPC_685 HSPC_691 HSPC_697
#> "031" "033" "031" "0411" "043" "032" "0213" "02121" "0413"
#> HSPC_703 HSPC_709 HSPC_715 LT-HSC_181 HSPC_679 HSPC_686 HSPC_692 HSPC_698 HSPC_704
#> "022" "023" "02122" "02121" "031" "02112" "023" "022" "022"
#> HSPC_710 HSPC_716 LT-HSC_182 HSPC_680 HSPC_687 HSPC_693 HSPC_699 HSPC_705 HSPC_711
#> "02111" "022" "0213" "022" "023" "023" "022" "01213" "02111"
#> HSPC_717 LT-HSC_183 HSPC_681 HSPC_688 HSPC_694 HSPC_700 HSPC_706 HSPC_712 HSPC_718
#> "0412" "031" "042" "02111" "02111" "0413" "033" "02111" "02111"
#> LT-HSC_184 HSPC_682 HSPC_689 HSPC_695 HSPC_701 HSPC_707 HSPC_713 HSPC_719 LT-HSC_185
#> "031" "01213" "022" "0132" "042" "042" "02121" "022" "023"
#> HSPC_683 HSPC_690 HSPC_696 HSPC_702 HSPC_708 HSPC_714 HSPC_720 LT-HSC_186 HSPC_684
#> "0412" "022" "043" "022" "031" "022" "01213" "02111" "023"
#> Prog_685 Prog_691 Prog_697 Prog_703 Prog_709 Prog_715 LT-HSC_187 Prog_679 Prog_686
#> "01211" "0213" "01122" "043" "014" "01212" "031" "01223" "0413"
#> Prog_692 Prog_698 Prog_704 Prog_710 Prog_716 LT-HSC_188 Prog_680 Prog_687 Prog_693
#> "032" "01312" "031" "031" "033" "031" "01221" "01212" "01221"
#> Prog_699 Prog_705 Prog_711 Prog_717 LT-HSC_189 Prog_681 Prog_688 Prog_694 Prog_700
#> "01213" "01213" "033" "01212" "02111" "01312" "01122" "033" "01112"
#> Prog_706 Prog_712 Prog_718 LT-HSC_190 Prog_682 Prog_689 Prog_695 Prog_701 Prog_707
#> "01311" "0132" "01222" "023" "0132" "033" "01111" "01112" "033"
#> Prog_713 Prog_719 LT-HSC_191 Prog_683 Prog_690 Prog_696 Prog_702 Prog_708 Prog_714
#> "01311" "01121" "031" "023" "033" "0411" "014" "014" "014"
#> Prog_720 LT-HSC_192 Prog_684 HSPC_727 HSPC_733 HSPC_739 HSPC_745 HSPC_751 HSPC_757
#> "014" "01221" "032" "022" "022" "023" "023" "022" "022"
#> LT-HSC_193 HSPC_721 HSPC_728 HSPC_734 HSPC_740 HSPC_746 HSPC_752 HSPC_758 LT-HSC_194
#> "022" "023" "0213" "01213" "022" "023" "023" "032" "022"
#> HSPC_722 HSPC_729 HSPC_735 HSPC_741 HSPC_747 HSPC_753 HSPC_759 LT-HSC_195 HSPC_723
#> "031" "031" "042" "02112" "022" "031" "032" "032" "032"
#> HSPC_730 HSPC_736 HSPC_742 HSPC_748 HSPC_754 HSPC_760 LT-HSC_196 HSPC_724 HSPC_731
#> "031" "032" "032" "022" "0213" "042" "02111" "032" "0412"
#> HSPC_737 HSPC_743 HSPC_749 HSPC_755 HSPC_761 LT-HSC_197 HSPC_725 HSPC_732 HSPC_738
#> "01212" "031" "022" "031" "032" "022" "023" "032" "022"
#> HSPC_744 HSPC_750 HSPC_756 HSPC_762 LT-HSC_198 HSPC_726 Prog_727 Prog_733 Prog_739
#> "042" "031" "022" "042" "022" "0213" "01213" "033" "0412"
#> Prog_745 Prog_751 Prog_757 LT-HSC_199 Prog_721 Prog_728 Prog_734 Prog_740 Prog_746
#> "033" "033" "0412" "02112" "014" "032" "014" "033" "0411"
#> Prog_752 Prog_758 LT-HSC_200 Prog_722 Prog_729 Prog_735 Prog_741 Prog_747 Prog_753
#> "033" "033" "022" "014" "023" "01213" "0213" "033" "01311"
#> Prog_759 LT-HSC_201 Prog_723 Prog_730 Prog_736 Prog_742 Prog_748 Prog_754 Prog_760
#> "01212" "022" "01122" "01121" "01311" "0213" "0413" "01312" "01222"
#> LT-HSC_202 Prog_724 Prog_731 Prog_737 Prog_743 Prog_749 Prog_755 Prog_761 LT-HSC_203
#> "031" "033" "01121" "031" "01213" "043" "0213" "0412" "0213"
#> Prog_725 Prog_732 Prog_738 Prog_744 Prog_750 Prog_756 Prog_762 LT-HSC_204 Prog_726
#> "031" "043" "033" "033" "0413" "043" "031" "032" "031"
#> HSPC_769 HSPC_775 HSPC_781 HSPC_787 HSPC_793 HSPC_799 LT-HSC_205 HSPC_763 HSPC_770
#> "023" "023" "022" "023" "02121" "023" "023" "02121" "042"
#> HSPC_776 HSPC_782 HSPC_788 HSPC_794 HSPC_800 LT-HSC_206 HSPC_764 HSPC_771 HSPC_777
#> "023" "022" "023" "032" "0413" "022" "022" "032" "032"
#> HSPC_783 HSPC_789 HSPC_795 HSPC_801 LT-HSC_207 HSPC_765 HSPC_772 HSPC_778 HSPC_784
#> "022" "042" "032" "031" "042" "023" "042" "031" "031"
#> HSPC_790 HSPC_796 HSPC_802 LT-HSC_208 HSPC_766 HSPC_773 HSPC_779 HSPC_785 HSPC_791
#> "042" "01212" "022" "022" "01221" "032" "042" "031" "043"
#> HSPC_797 HSPC_803 LT-HSC_209 HSPC_767 HSPC_774 HSPC_780 HSPC_786 HSPC_792 HSPC_798
#> "032" "022" "02112" "01221" "032" "031" "031" "0213" "022"
#> HSPC_804 LT-HSC_210 HSPC_768 Prog_769 Prog_775 Prog_781 Prog_787 Prog_793 Prog_799
#> "022" "022" "023" "01223" "033" "01223" "043" "0132" "033"
#> LT-HSC_211 Prog_763 Prog_770 Prog_776 Prog_782 Prog_788 Prog_794 Prog_800 LT-HSC_212
#> "042" "01221" "014" "01121" "01221" "01122" "01222" "01223" "031"
#> Prog_764 Prog_771 Prog_777 Prog_783 Prog_789 Prog_795 Prog_801 LT-HSC_213 Prog_765
#> "01223" "014" "01211" "014" "01211" "01211" "0132" "022" "01311"
#> Prog_772 Prog_778 Prog_784 Prog_790 Prog_796 Prog_802 LT-HSC_214 Prog_766 Prog_773
#> "01223" "023" "032" "01121" "0412" "014" "031" "02122" "02122"
#> Prog_779 Prog_785 Prog_791 Prog_797 Prog_803 LT-HSC_215 Prog_767 Prog_774 Prog_780
#> "01311" "033" "01211" "031" "043" "032" "01113" "01212" "01113"
#> Prog_786 Prog_792 Prog_798 Prog_804 LT-HSC_216 Prog_768 HSPC_811 HSPC_817 HSPC_823
#> "01113" "01312" "01311" "01212" "0411" "01221" "02122" "02122" "02121"
#> HSPC_829 HSPC_835 HSPC_841 HSPC_847 HSPC_805 HSPC_812 HSPC_818 HSPC_824 HSPC_830
#> "0213" "032" "043" "023" "02122" "01221" "031" "031" "02121"
#> HSPC_836 HSPC_842 HSPC_848 HSPC_806 HSPC_813 HSPC_819 HSPC_825 HSPC_831 HSPC_837
#> "023" "023" "022" "023" "01221" "042" "031" "031" "0412"
#> HSPC_843 HSPC_849 HSPC_807 HSPC_814 HSPC_820 HSPC_826 HSPC_832 HSPC_838 HSPC_844
#> "031" "022" "01212" "0413" "01221" "031" "032" "032" "022"
#> HSPC_850 HSPC_808 HSPC_815 HSPC_821 HSPC_827 HSPC_833 HSPC_839 HSPC_845 HSPC_851
#> "02111" "01221" "032" "042" "022" "01221" "0413" "031" "023"
#> HSPC_809 HSPC_816 HSPC_822 HSPC_828 HSPC_834 HSPC_840 HSPC_846 HSPC_852 HSPC_810
#> "022" "042" "031" "032" "032" "022" "042" "022" "022"
#> Prog_811 Prog_817 Prog_823 Prog_829 Prog_835 Prog_841 Prog_847 Prog_805 Prog_812
#> "014" "0132" "031" "01212" "014" "0411" "01223" "042" "023"
#> Prog_818 Prog_824 Prog_830 Prog_836 Prog_842 Prog_848 Prog_806 Prog_813 Prog_819
#> "014" "01223" "01122" "01311" "014" "022" "033" "01121" "01121"
#> Prog_825 Prog_831 Prog_837 Prog_843 Prog_849 Prog_807 Prog_814 Prog_820 Prog_826
#> "01113" "014" "014" "01312" "042" "014" "01121" "0132" "01122"
#> Prog_832 Prog_838 Prog_844 Prog_850 Prog_808 Prog_815 Prog_821 Prog_827 Prog_833
#> "01211" "01121" "014" "014" "01212" "014" "01113" "033" "01221"
#> Prog_839 Prog_845 Prog_851 Prog_809 Prog_816 Prog_822 Prog_828 Prog_834 Prog_840
#> "01311" "01311" "033" "0132" "01223" "01113" "01113" "01212" "01212"
#> Prog_846 Prog_852 Prog_810
#> "01211" "0411" "01311"
get_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 904))
#> HSPC_007 HSPC_013 HSPC_019 HSPC_025 HSPC_031 HSPC_037 LT-HSC_001 HSPC_001 HSPC_008
#> "0213" "023" "02112" "042" "032" "042" "023" "01221" "042"
#> HSPC_014 HSPC_020 HSPC_026 HSPC_032 HSPC_038 LT-HSC_002 HSPC_002 HSPC_009 HSPC_015
#> "022" "042" "0412" "02111" "022" "042" "022" "022" "023"
#> HSPC_021 HSPC_027 HSPC_033 HSPC_039 LT-HSC_003 HSPC_003 HSPC_010 HSPC_016 HSPC_022
#> "022" "033" "031" "02112" "023" "01213" "0213" "01221" "0412"
#> HSPC_028 HSPC_034 HSPC_040 LT-HSC_004 HSPC_004 HSPC_011 HSPC_017 HSPC_023 HSPC_029
#> "031" "01213" "032" "022" "031" "042" "022" "042" "02112"
#> HSPC_035 HSPC_041 LT-HSC_005 HSPC_005 HSPC_012 HSPC_018 HSPC_024 HSPC_030 HSPC_036
#> "022" "042" "02112" "02112" "042" "042" "022" "031" "01212"
#> HSPC_042 LT-HSC_006 HSPC_006 Prog_007 Prog_013 Prog_019 Prog_025 Prog_031 Prog_037
#> "032" "022" "0412" "01223" "01212" "01312" "0411" "033" "033"
#> LT-HSC_007 Prog_001 Prog_008 Prog_014 Prog_020 Prog_026 Prog_032 Prog_038 LT-HSC_008
#> "042" "043" "01112" "0112" "014" "033" "014" "014" "031"
#> Prog_002 Prog_009 Prog_015 Prog_021 Prog_027 Prog_033 Prog_039 LT-HSC_009 Prog_003
#> "01213" "01112" "01212" "014" "01222" "0112" "01112" "022" "01222"
#> Prog_010 Prog_016 Prog_022 Prog_028 Prog_034 Prog_040 LT-HSC_010 Prog_004 Prog_011
#> "0412" "0411" "0411" "0112" "02112" "042" "0412" "033" "014"
#> Prog_017 Prog_023 Prog_029 Prog_035 Prog_041 LT-HSC_011 Prog_005 Prog_012 Prog_018
#> "01211" "01222" "014" "01111" "0213" "0213" "0213" "022" "022"
#> Prog_024 Prog_030 Prog_036 Prog_042 LT-HSC_012 Prog_006 HSPC_049 HSPC_055 HSPC_061
#> "014" "0411" "0412" "0411" "0411" "01111" "031" "042" "042"
#> HSPC_067 HSPC_073 HSPC_079 LT-HSC_013 HSPC_043 HSPC_050 HSPC_056 HSPC_062 HSPC_068
#> "042" "022" "0412" "022" "042" "043" "022" "0413" "022"
#> HSPC_074 HSPC_080 LT-HSC_014 HSPC_044 HSPC_051 HSPC_057 HSPC_063 HSPC_069 HSPC_075
#> "022" "032" "022" "043" "032" "022" "0412" "032" "022"
#> HSPC_081 LT-HSC_015 HSPC_045 HSPC_052 HSPC_058 HSPC_064 HSPC_070 HSPC_076 HSPC_082
#> "032" "022" "042" "043" "031" "0413" "033" "032" "042"
#> LT-HSC_016 HSPC_046 HSPC_053 HSPC_059 HSPC_065 HSPC_071 HSPC_077 HSPC_083 LT-HSC_017
#> "022" "032" "01212" "02112" "032" "0413" "01212" "022" "022"
#> HSPC_047 HSPC_054 HSPC_060 HSPC_066 HSPC_072 HSPC_078 HSPC_084 LT-HSC_018 HSPC_048
#> "023" "031" "031" "031" "0413" "043" "042" "022" "032"
#> Prog_049 Prog_055 Prog_061 Prog_067 Prog_073 Prog_079 LT-HSC_019 Prog_043 Prog_050
#> "01112" "01211" "0112" "014" "032" "01112" "02112" "0132" "01211"
#> Prog_056 Prog_062 Prog_068 Prog_074 Prog_080 LT-HSC_020 Prog_044 Prog_051 Prog_057
#> "01222" "042" "032" "0411" "043" "031" "032" "014" "01312"
#> Prog_063 Prog_069 Prog_075 Prog_081 LT-HSC_021 Prog_045 Prog_052 Prog_058 Prog_064
#> "043" "01222" "01211" "01112" "0413" "0132" "043" "014" "014"
#> Prog_070 Prog_076 Prog_082 LT-HSC_022 Prog_046 Prog_053 Prog_059 Prog_065 Prog_071
#> "0412" "014" "01111" "022" "0112" "0112" "01222" "01312" "01223"
#> Prog_077 Prog_083 LT-HSC_023 Prog_047 Prog_054 Prog_060 Prog_066 Prog_072 Prog_078
#> "01222" "01212" "022" "01211" "0411" "0213" "014" "033" "014"
#> Prog_084 LT-HSC_024 Prog_048 HSPC_091 HSPC_097 HSPC_103 HSPC_109 HSPC_115 HSPC_121
#> "0112" "033" "032" "02122" "023" "022" "043" "022" "023"
#> LT-HSC_025 HSPC_085 HSPC_092 HSPC_098 HSPC_104 HSPC_110 HSPC_116 HSPC_122 LT-HSC_026
#> "02121" "042" "02121" "043" "023" "043" "02111" "031" "022"
#> HSPC_086 HSPC_093 HSPC_099 HSPC_105 HSPC_111 HSPC_117 HSPC_123 LT-HSC_027 HSPC_087
#> "02112" "02112" "042" "022" "022" "042" "022" "023" "022"
#> HSPC_094 HSPC_100 HSPC_106 HSPC_112 HSPC_118 HSPC_124 LT-HSC_028 HSPC_088 HSPC_095
#> "01221" "032" "022" "02111" "031" "02111" "032" "032" "022"
#> HSPC_101 HSPC_107 HSPC_113 HSPC_119 HSPC_125 LT-HSC_029 HSPC_089 HSPC_096 HSPC_102
#> "01213" "042" "023" "023" "031" "02122" "032" "043" "01211"
#> HSPC_108 HSPC_114 HSPC_120 HSPC_126 LT-HSC_030 HSPC_090 Prog_091 Prog_097 Prog_103
#> "031" "032" "031" "032" "02121" "01221" "01111" "01211" "01221"
#> Prog_109 Prog_115 Prog_121 LT-HSC_031 Prog_085 Prog_092 Prog_098 Prog_104 Prog_110
#> "0412" "014" "0213" "032" "01222" "033" "0112" "02111" "01112"
#> Prog_116 Prog_122 LT-HSC_032 Prog_086 Prog_093 Prog_099 Prog_105 Prog_111 Prog_117
#> "01221" "033" "01111" "02122" "01223" "01222" "01211" "014" "0132"
#> Prog_123 LT-HSC_033 Prog_087 Prog_094 Prog_100 Prog_106 Prog_112 Prog_118 Prog_124
#> "01211" "031" "01211" "014" "0112" "031" "01112" "0412" "033"
#> LT-HSC_034 Prog_088 Prog_095 Prog_101 Prog_107 Prog_113 Prog_119 Prog_125 LT-HSC_035
#> "031" "043" "0112" "01312" "01112" "01223" "01111" "031" "02122"
#> Prog_089 Prog_096 Prog_102 Prog_108 Prog_114 Prog_120 Prog_126 LT-HSC_036 Prog_090
#> "014" "032" "031" "0411" "0413" "023" "014" "033" "0112"
#> HSPC_133 HSPC_139 HSPC_145 HSPC_151 HSPC_157 HSPC_163 LT-HSC_037 HSPC_127 HSPC_134
#> "022" "022" "023" "042" "043" "023" "023" "0412" "023"
#> HSPC_140 HSPC_146 HSPC_152 HSPC_158 HSPC_164 LT-HSC_038 HSPC_128 HSPC_135 HSPC_141
#> "023" "0412" "022" "042" "022" "023" "023" "031" "022"
#> HSPC_147 HSPC_153 HSPC_159 HSPC_165 LT-HSC_039 HSPC_129 HSPC_136 HSPC_142 HSPC_148
#> "023" "022" "042" "043" "022" "02111" "042" "042" "043"
#> HSPC_154 HSPC_160 HSPC_166 LT-HSC_040 HSPC_130 HSPC_137 HSPC_143 HSPC_149 HSPC_155
#> "043" "02112" "042" "022" "042" "02111" "022" "022" "023"
#> HSPC_161 HSPC_167 LT-HSC_041 HSPC_131 HSPC_138 HSPC_144 HSPC_150 HSPC_156 HSPC_162
#> "042" "023" "022" "022" "01221" "031" "02111" "01221" "032"
#> HSPC_168 LT-HSC_042 HSPC_132 Prog_133 Prog_139 Prog_145 Prog_151 Prog_157 Prog_163
#> "0413" "022" "0132" "01211" "0112" "01213" "032" "01222" "01113"
#> LT-HSC_043 Prog_127 Prog_134 Prog_140 Prog_146 Prog_152 Prog_158 Prog_164 LT-HSC_044
#> "0132" "032" "043" "01111" "01113" "043" "01112" "0213" "043"
#> Prog_128 Prog_135 Prog_141 Prog_147 Prog_153 Prog_159 Prog_165 LT-HSC_045 Prog_129
#> "01211" "032" "0132" "02112" "01222" "0412" "043" "0412" "01311"
#> Prog_136 Prog_142 Prog_148 Prog_154 Prog_160 Prog_166 LT-HSC_046 Prog_130 Prog_137
#> "0132" "033" "023" "033" "022" "014" "031" "01312" "01222"
#> Prog_143 Prog_149 Prog_155 Prog_161 Prog_167 LT-HSC_047 Prog_131 Prog_138 Prog_144
#> "01312" "0413" "01211" "033" "01212" "0213" "033" "02111" "043"
#> Prog_150 Prog_156 Prog_162 Prog_168 LT-HSC_048 Prog_132 HSPC_175 HSPC_181 HSPC_187
#> "01312" "02122" "0412" "01312" "023" "01312" "042" "022" "022"
#> HSPC_193 HSPC_199 HSPC_205 LT-HSC_049 HSPC_169 HSPC_176 HSPC_182 HSPC_188 HSPC_194
#> "033" "031" "022" "022" "042" "022" "023" "02111" "02112"
#> HSPC_200 HSPC_206 LT-HSC_050 HSPC_170 HSPC_177 HSPC_183 HSPC_189 HSPC_195 HSPC_201
#> "022" "01223" "022" "023" "022" "033" "031" "01213" "02112"
#> HSPC_207 LT-HSC_051 HSPC_171 HSPC_178 HSPC_184 HSPC_190 HSPC_196 HSPC_202 HSPC_208
#> "032" "022" "022" "031" "02121" "0413" "042" "032" "022"
#> LT-HSC_052 HSPC_172 HSPC_179 HSPC_185 HSPC_191 HSPC_197 HSPC_203 HSPC_209 LT-HSC_053
#> "01221" "01221" "01221" "023" "022" "02112" "042" "02112" "02112"
#> HSPC_173 HSPC_180 HSPC_186 HSPC_192 HSPC_198 HSPC_204 HSPC_210 LT-HSC_054 HSPC_174
#> "023" "043" "033" "022" "031" "0412" "043" "022" "031"
#> Prog_175 Prog_181 Prog_187 Prog_193 Prog_199 Prog_205 LT-HSC_055 Prog_169 Prog_176
#> "0411" "02112" "033" "042" "032" "0413" "0132" "02112" "01221"
#> Prog_182 Prog_188 Prog_194 Prog_200 Prog_206 LT-HSC_056 Prog_170 Prog_177 Prog_183
#> "043" "014" "023" "043" "01222" "01312" "01112" "042" "0132"
#> Prog_189 Prog_195 Prog_201 Prog_207 LT-HSC_057 Prog_171 Prog_178 Prog_184 Prog_190
#> "01222" "042" "0412" "014" "031" "042" "0112" "01312" "01211"
#> Prog_196 Prog_202 Prog_208 LT-HSC_058 Prog_172 Prog_179 Prog_185 Prog_191 Prog_197
#> "01111" "0213" "033" "032" "014" "01311" "01111" "033" "01312"
#> Prog_203 Prog_209 LT-HSC_059 Prog_173 Prog_180 Prog_186 Prog_192 Prog_198 Prog_204
#> "0132" "01311" "02122" "043" "032" "01223" "01211" "02112" "023"
#> Prog_210 LT-HSC_060 Prog_174 HSPC_217 HSPC_223 HSPC_229 HSPC_235 HSPC_241 HSPC_247
#> "032" "01311" "0213" "02122" "022" "023" "022" "02112" "023"
#> LT-HSC_061 HSPC_211 HSPC_218 HSPC_224 HSPC_230 HSPC_236 HSPC_242 HSPC_248 LT-HSC_062
#> "02121" "042" "022" "022" "042" "043" "023" "022" "023"
#> HSPC_212 HSPC_219 HSPC_225 HSPC_231 HSPC_237 HSPC_243 HSPC_249 LT-HSC_063 HSPC_213
#> "023" "042" "022" "023" "022" "0412" "022" "033" "0413"
#> HSPC_220 HSPC_226 HSPC_232 HSPC_238 HSPC_244 HSPC_250 LT-HSC_064 HSPC_214 HSPC_221
#> "022" "02112" "023" "02122" "032" "0413" "0112" "01213" "031"
#> HSPC_227 HSPC_233 HSPC_239 HSPC_245 HSPC_251 LT-HSC_065 HSPC_215 HSPC_222 HSPC_228
#> "022" "042" "022" "022" "0413" "031" "0412" "042" "023"
#> HSPC_234 HSPC_240 HSPC_246 HSPC_252 LT-HSC_066 HSPC_216 Prog_217 Prog_223 Prog_229
#> "02112" "031" "022" "0213" "031" "01213" "01111" "042" "01112"
#> Prog_235 Prog_241 Prog_247 LT-HSC_067 Prog_211 Prog_218 Prog_224 Prog_230 Prog_236
#> "023" "022" "033" "0213" "0112" "01222" "0132" "0413" "01213"
#> Prog_242 Prog_248 LT-HSC_068 Prog_212 Prog_219 Prog_225 Prog_231 Prog_237 Prog_243
#> "014" "043" "01221" "014" "0213" "033" "0132" "042" "01312"
#> Prog_249 LT-HSC_069 Prog_213 Prog_220 Prog_226 Prog_232 Prog_238 Prog_244 Prog_250
#> "01111" "032" "043" "0213" "031" "033" "01211" "032" "014"
#> LT-HSC_070 Prog_214 Prog_221 Prog_227 Prog_233 Prog_239 Prog_245 Prog_251 LT-HSC_071
#> "043" "0413" "01111" "0132" "01222" "01111" "01211" "02122" "032"
#> Prog_215 Prog_222 Prog_228 Prog_234 Prog_240 Prog_246 Prog_252 LT-HSC_072 Prog_216
#> "01113" "032" "01311" "01212" "01221" "033" "032" "01211" "01113"
#> HSPC_259 HSPC_265 HSPC_271 HSPC_277 HSPC_283 HSPC_289 LT-HSC_073 HSPC_253 HSPC_260
#> "023" "022" "0412" "023" "022" "022" "023" "0413" "02112"
#> HSPC_266 HSPC_272 HSPC_278 HSPC_284 HSPC_290 LT-HSC_074 HSPC_254 HSPC_261 HSPC_267
#> "022" "02112" "042" "02112" "0413" "022" "022" "0132" "031"
#> HSPC_273 HSPC_279 HSPC_285 HSPC_291 LT-HSC_075 HSPC_255 HSPC_262 HSPC_268 HSPC_274
#> "02112" "043" "01213" "033" "031" "032" "02121" "01212" "022"
#> HSPC_280 HSPC_286 HSPC_292 LT-HSC_076 HSPC_256 HSPC_263 HSPC_269 HSPC_275 HSPC_281
#> "0412" "042" "0412" "042" "0112" "0412" "0132" "01312" "023"
#> HSPC_287 HSPC_293 LT-HSC_077 HSPC_257 HSPC_264 HSPC_270 HSPC_276 HSPC_282 HSPC_288
#> "0413" "0412" "023" "0413" "022" "032" "032" "01212" "01212"
#> HSPC_294 LT-HSC_078 HSPC_258 Prog_259 Prog_265 Prog_271 Prog_277 Prog_283 Prog_289
#> "0413" "022" "01222" "031" "0112" "033" "031" "042" "0412"
#> LT-HSC_079 Prog_253 Prog_260 Prog_266 Prog_272 Prog_278 Prog_284 Prog_290 LT-HSC_080
#> "02112" "014" "01223" "01221" "01223" "0112" "014" "0112" "032"
#> Prog_254 Prog_261 Prog_267 Prog_273 Prog_279 Prog_285 Prog_291 LT-HSC_081 Prog_255
#> "0112" "014" "01311" "01312" "01112" "014" "0411" "01221" "01211"
#> Prog_262 Prog_268 Prog_274 Prog_280 Prog_286 Prog_292 LT-HSC_082 Prog_256 Prog_263
#> "01223" "01223" "014" "033" "0112" "01222" "032" "042" "01311"
#> Prog_269 Prog_275 Prog_281 Prog_287 Prog_293 LT-HSC_083 Prog_257 Prog_264 Prog_270
#> "0112" "01223" "014" "01312" "033" "02121" "0213" "023" "01311"
#> Prog_276 Prog_282 Prog_288 Prog_294 LT-HSC_084 Prog_258 HSPC_301 HSPC_307 HSPC_313
#> "01212" "01113" "0112" "01222" "033" "0132" "023" "022" "042"
#> HSPC_319 HSPC_325 HSPC_331 LT-HSC_085 HSPC_295 HSPC_302 HSPC_308 HSPC_314 HSPC_320
#> "02122" "022" "022" "022" "0413" "023" "043" "042" "043"
#> HSPC_326 HSPC_332 LT-HSC_086 HSPC_296 HSPC_303 HSPC_309 HSPC_315 HSPC_321 HSPC_327
#> "022" "01211" "042" "022" "01221" "022" "022" "042" "01212"
#> HSPC_333 LT-HSC_087 HSPC_297 HSPC_304 HSPC_310 HSPC_316 HSPC_322 HSPC_328 HSPC_334
#> "01213" "02122" "022" "032" "022" "023" "031" "042" "022"
#> LT-HSC_088 HSPC_298 HSPC_305 HSPC_311 HSPC_317 HSPC_323 HSPC_329 HSPC_335 LT-HSC_089
#> "043" "032" "0412" "02122" "023" "031" "042" "022" "022"
#> HSPC_299 HSPC_306 HSPC_312 HSPC_318 HSPC_324 HSPC_330 HSPC_336 LT-HSC_090 HSPC_300
#> "033" "033" "0413" "022" "031" "031" "022" "032" "01221"
#> Prog_301 Prog_307 Prog_313 Prog_319 Prog_325 Prog_331 LT-HSC_091 Prog_295 Prog_302
#> "0411" "0412" "0413" "0132" "01211" "01212" "01111" "0412" "02122"
#> Prog_308 Prog_314 Prog_320 Prog_326 Prog_332 LT-HSC_092 Prog_296 Prog_303 Prog_309
#> "01223" "033" "01221" "01111" "01222" "02122" "01222" "022" "022"
#> Prog_315 Prog_321 Prog_327 Prog_333 LT-HSC_093 Prog_297 Prog_304 Prog_310 Prog_316
#> "0411" "0411" "01211" "043" "042" "043" "01211" "0412" "0411"
#> Prog_322 Prog_328 Prog_334 LT-HSC_094 Prog_298 Prog_305 Prog_311 Prog_317 Prog_323
#> "043" "0411" "014" "042" "014" "0413" "043" "02122" "0411"
#> Prog_329 Prog_335 LT-HSC_095 Prog_299 Prog_306 Prog_312 Prog_318 Prog_324 Prog_330
#> "0411" "0413" "01112" "0112" "022" "01111" "01111" "0112" "0132"
#> Prog_336 LT-HSC_096 Prog_300 HSPC_343 HSPC_349 HSPC_355 HSPC_361 HSPC_367 HSPC_373
#> "0132" "01212" "01311" "0132" "031" "0213" "023" "022" "023"
#> LT-HSC_097 HSPC_337 HSPC_344 HSPC_350 HSPC_356 HSPC_362 HSPC_368 HSPC_374 LT-HSC_098
#> "02121" "022" "0412" "022" "043" "0411" "042" "032" "0112"
#> HSPC_338 HSPC_345 HSPC_351 HSPC_357 HSPC_363 HSPC_369 HSPC_375 LT-HSC_099 HSPC_339
#> "01112" "043" "043" "02111" "022" "02111" "02111" "023" "032"
#> HSPC_346 HSPC_352 HSPC_358 HSPC_364 HSPC_370 HSPC_376 LT-HSC_100 HSPC_340 HSPC_347
#> "01213" "0412" "042" "042" "01312" "042" "01112" "0213" "02112"
#> HSPC_353 HSPC_359 HSPC_365 HSPC_371 HSPC_377 LT-HSC_101 HSPC_341 HSPC_348 HSPC_354
#> "01212" "032" "023" "01212" "0413" "0411" "01221" "033" "022"
#> HSPC_360 HSPC_366 HSPC_372 HSPC_378 LT-HSC_102 HSPC_342 Prog_343 Prog_349 Prog_355
#> "042" "0213" "042" "02121" "01112" "01311" "0132" "0411" "0413"
#> Prog_361 Prog_367 Prog_373 LT-HSC_103 Prog_337 Prog_344 Prog_350 Prog_356 Prog_362
#> "014" "01312" "01113" "0132" "01111" "02112" "014" "0112" "0412"
#> Prog_368 Prog_374 LT-HSC_104 Prog_338 Prog_345 Prog_351 Prog_357 Prog_363 Prog_369
#> "014" "014" "02122" "01221" "0411" "014" "01112" "014" "0411"
#> Prog_375 LT-HSC_105 Prog_339 Prog_346 Prog_352 Prog_358 Prog_364 Prog_370 Prog_376
#> "01112" "0411" "0112" "014" "01112" "031" "0112" "0411" "0112"
#> LT-HSC_106 Prog_340 Prog_347 Prog_353 Prog_359 Prog_365 Prog_371 Prog_377 LT-HSC_107
#> "0412" "014" "0213" "0132" "0112" "0213" "01212" "01111" "023"
#> Prog_341 Prog_348 Prog_354 Prog_360 Prog_366 Prog_372 Prog_378 LT-HSC_108 Prog_342
#> "01212" "02121" "0412" "01112" "014" "0112" "032" "01211" "01112"
#> HSPC_385 HSPC_391 HSPC_397 HSPC_403 HSPC_409 HSPC_415 HSPC_421 HSPC_379 HSPC_386
#> "02111" "031" "02111" "042" "023" "023" "043" "02121" "042"
#> HSPC_392 HSPC_398 HSPC_404 HSPC_410 HSPC_416 HSPC_422 HSPC_380 HSPC_387 HSPC_393
#> "032" "032" "0112" "01212" "031" "032" "032" "0412" "0411"
#> HSPC_399 HSPC_405 HSPC_411 HSPC_417 HSPC_423 HSPC_381 HSPC_388 HSPC_394 HSPC_400
#> "031" "032" "01212" "01221" "01221" "02112" "01221" "02111" "0412"
#> HSPC_406 HSPC_412 HSPC_418 HSPC_424 HSPC_382 HSPC_389 HSPC_395 HSPC_401 HSPC_407
#> "042" "01312" "031" "0413" "01221" "014" "043" "02111" "01311"
#> HSPC_413 HSPC_419 HSPC_425 HSPC_383 HSPC_390 HSPC_396 HSPC_402 HSPC_408 HSPC_414
#> "042" "01312" "0413" "022" "042" "032" "032" "01111" "02112"
#> HSPC_420 HSPC_426 HSPC_384 Prog_385 Prog_391 Prog_397 Prog_403 Prog_409 Prog_415
#> "01221" "042" "02112" "01111" "0213" "01112" "0112" "01112" "01112"
#> Prog_421 Prog_379 Prog_386 Prog_392 Prog_398 Prog_404 Prog_410 Prog_416 Prog_422
#> "01112" "0112" "01112" "01222" "01112" "01113" "0112" "0112" "0413"
#> Prog_380 Prog_387 Prog_393 Prog_399 Prog_405 Prog_411 Prog_417 Prog_423 Prog_381
#> "0112" "01311" "0112" "01223" "01223" "042" "0411" "0412" "0112"
#> Prog_388 Prog_394 Prog_400 Prog_406 Prog_412 Prog_418 Prog_424 Prog_382 Prog_389
#> "01112" "033" "02111" "0112" "01213" "014" "0112" "031" "0132"
#> Prog_395 Prog_401 Prog_407 Prog_413 Prog_419 Prog_425 Prog_383 Prog_390 Prog_396
#> "01112" "0132" "033" "01212" "01112" "014" "01111" "043" "014"
#> Prog_402 Prog_408 Prog_414 Prog_420 Prog_426 Prog_384 HSPC_433 HSPC_439 HSPC_445
#> "0412" "014" "01312" "01212" "01211" "0411" "02121" "02121" "02121"
#> HSPC_451 HSPC_457 HSPC_463 LT-HSC_109 HSPC_427 HSPC_434 HSPC_440 HSPC_446 HSPC_452
#> "023" "022" "032" "022" "023" "0213" "042" "022" "02111"
#> HSPC_458 HSPC_464 LT-HSC_110 HSPC_428 HSPC_435 HSPC_441 HSPC_447 HSPC_453 HSPC_459
#> "02112" "02112" "031" "02121" "031" "031" "033" "032" "031"
#> HSPC_465 LT-HSC_111 HSPC_429 HSPC_436 HSPC_442 HSPC_448 HSPC_454 HSPC_460 HSPC_466
#> "031" "022" "02111" "0132" "01221" "031" "0132" "031" "042"
#> LT-HSC_112 HSPC_430 HSPC_437 HSPC_443 HSPC_449 HSPC_455 HSPC_461 HSPC_467 LT-HSC_113
#> "032" "031" "02112" "031" "031" "022" "042" "031" "032"
#> HSPC_431 HSPC_438 HSPC_444 HSPC_450 HSPC_456 HSPC_462 HSPC_468 LT-HSC_114 HSPC_432
#> "031" "0213" "022" "022" "01221" "031" "031" "023" "022"
#> Prog_433 Prog_439 Prog_445 Prog_451 Prog_457 Prog_463 LT-HSC_115 Prog_427 Prog_434
#> "031" "033" "032" "01312" "014" "033" "01221" "022" "01111"
#> Prog_440 Prog_446 Prog_452 Prog_458 Prog_464 LT-HSC_116 Prog_428 Prog_435 Prog_441
#> "043" "032" "02121" "043" "032" "031" "01221" "0411" "01211"
#> Prog_447 Prog_453 Prog_459 Prog_465 LT-HSC_117 Prog_429 Prog_436 Prog_442 Prog_448
#> "01223" "014" "033" "043" "031" "01111" "01221" "02112" "033"
#> Prog_454 Prog_460 Prog_466 LT-HSC_118 Prog_430 Prog_437 Prog_443 Prog_449 Prog_455
#> "0412" "042" "0411" "02112" "0112" "0132" "01311" "01111" "031"
#> Prog_461 Prog_467 LT-HSC_119 Prog_431 Prog_438 Prog_444 Prog_450 Prog_456 Prog_462
#> "022" "033" "0213" "033" "022" "01111" "01222" "01223" "042"
#> Prog_468 LT-HSC_120 Prog_432 HSPC_475 HSPC_481 HSPC_487 HSPC_493 HSPC_499 HSPC_505
#> "0411" "0413" "043" "022" "023" "02121" "022" "022" "042"
#> LT-HSC_121 HSPC_469 HSPC_476 HSPC_482 HSPC_488 HSPC_494 HSPC_500 HSPC_506 LT-HSC_122
#> "0213" "023" "02111" "022" "022" "022" "022" "022" "042"
#> HSPC_470 HSPC_477 HSPC_483 HSPC_489 HSPC_495 HSPC_501 HSPC_507 LT-HSC_123 HSPC_471
#> "022" "01221" "022" "042" "043" "023" "022" "022" "022"
#> HSPC_478 HSPC_484 HSPC_490 HSPC_496 HSPC_502 HSPC_508 LT-HSC_124 HSPC_472 HSPC_479
#> "022" "02112" "031" "031" "032" "01311" "031" "032" "031"
#> HSPC_485 HSPC_491 HSPC_497 HSPC_503 HSPC_509 LT-HSC_125 HSPC_473 HSPC_480 HSPC_486
#> "01212" "0412" "022" "01212" "042" "031" "031" "032" "042"
#> HSPC_492 HSPC_498 HSPC_504 HSPC_510 LT-HSC_126 HSPC_474 Prog_475 Prog_481 Prog_487
#> "032" "031" "022" "0412" "032" "032" "01312" "033" "01312"
#> Prog_493 Prog_499 Prog_505 LT-HSC_127 Prog_469 Prog_476 Prog_482 Prog_488 Prog_494
#> "01222" "01212" "01312" "02122" "042" "01213" "01222" "01311" "043"
#> Prog_500 Prog_506 LT-HSC_128 Prog_470 Prog_477 Prog_483 Prog_489 Prog_495 Prog_501
#> "01312" "01211" "031" "01213" "0112" "043" "01211" "032" "01223"
#> Prog_507 LT-HSC_129 Prog_471 Prog_478 Prog_484 Prog_490 Prog_496 Prog_502 Prog_508
#> "0411" "02112" "01222" "01113" "01223" "043" "033" "0112" "01113"
#> LT-HSC_130 Prog_472 Prog_479 Prog_485 Prog_491 Prog_497 Prog_503 Prog_509 LT-HSC_131
#> "0132" "043" "01222" "0132" "01311" "0411" "043" "031" "031"
#> Prog_473 Prog_480 Prog_486 Prog_492 Prog_498 Prog_504 Prog_510 LT-HSC_132 Prog_474
#> "01223" "023" "01211" "031" "0213" "01213" "042" "014" "032"
#> HSPC_517 HSPC_523 HSPC_529 HSPC_535 HSPC_541 HSPC_547 LT-HSC_133 HSPC_511 HSPC_518
#> "023" "032" "02111" "022" "022" "032" "02121" "023" "022"
#> HSPC_524 HSPC_530 HSPC_536 HSPC_542 HSPC_548 LT-HSC_134 HSPC_512 HSPC_519 HSPC_525
#> "022" "022" "02111" "02111" "022" "023" "032" "02112" "023"
#> HSPC_531 HSPC_537 HSPC_543 HSPC_549 LT-HSC_135 HSPC_513 HSPC_520 HSPC_526 HSPC_532
#> "022" "042" "042" "022" "022" "02121" "042" "031" "042"
#> HSPC_538 HSPC_544 HSPC_550 LT-HSC_136 HSPC_514 HSPC_521 HSPC_527 HSPC_533 HSPC_539
#> "031" "01213" "042" "023" "031" "022" "01221" "032" "022"
#> HSPC_545 HSPC_551 LT-HSC_137 HSPC_515 HSPC_522 HSPC_528 HSPC_534 HSPC_540 HSPC_546
#> "022" "042" "022" "031" "022" "0413" "031" "032" "022"
#> HSPC_552 LT-HSC_138 HSPC_516 Prog_517 Prog_523 Prog_529 Prog_535 Prog_541 Prog_547
#> "042" "022" "032" "033" "0112" "01311" "0112" "01311" "0132"
#> LT-HSC_139 Prog_511 Prog_518 Prog_524 Prog_530 Prog_536 Prog_542 Prog_548 LT-HSC_140
#> "031" "031" "0413" "042" "01213" "0112" "0413" "0112" "022"
#> Prog_512 Prog_519 Prog_525 Prog_531 Prog_537 Prog_543 Prog_549 LT-HSC_141 Prog_513
#> "0411" "042" "043" "01312" "022" "014" "0413" "02111" "033"
#> Prog_520 Prog_526 Prog_532 Prog_538 Prog_544 Prog_550 LT-HSC_142 Prog_514 Prog_521
#> "01311" "023" "022" "02121" "023" "01213" "01213" "01223" "01213"
#> Prog_527 Prog_533 Prog_539 Prog_545 Prog_551 LT-HSC_143 Prog_515 Prog_522 Prog_528
#> "01213" "022" "0411" "014" "01212" "0132" "043" "022" "014"
#> Prog_534 Prog_540 Prog_546 Prog_552 LT-HSC_144 Prog_516 HSPC_559 HSPC_565 HSPC_571
#> "043" "023" "023" "0412" "042" "01111" "022" "023" "031"
#> HSPC_577 HSPC_583 HSPC_589 LT-HSC_145 HSPC_553 HSPC_560 HSPC_566 HSPC_572 HSPC_578
#> "022" "02111" "022" "022" "01312" "022" "022" "023" "022"
#> HSPC_584 HSPC_590 LT-HSC_146 HSPC_554 HSPC_561 HSPC_567 HSPC_573 HSPC_579 HSPC_585
#> "022" "042" "031" "022" "02111" "031" "022" "031" "022"
#> HSPC_591 LT-HSC_147 HSPC_555 HSPC_562 HSPC_568 HSPC_574 HSPC_580 HSPC_586 HSPC_592
#> "023" "022" "022" "023" "022" "01213" "032" "032" "031"
#> LT-HSC_148 HSPC_556 HSPC_563 HSPC_569 HSPC_575 HSPC_581 HSPC_587 HSPC_593 LT-HSC_149
#> "042" "032" "031" "0413" "031" "02112" "02112" "022" "022"
#> HSPC_557 HSPC_564 HSPC_570 HSPC_576 HSPC_582 HSPC_588 HSPC_594 LT-HSC_150 HSPC_558
#> "032" "02112" "02112" "022" "022" "02121" "022" "022" "02112"
#> Prog_559 Prog_565 Prog_571 Prog_577 Prog_583 Prog_589 LT-HSC_151 Prog_553 Prog_560
#> "01222" "01213" "01223" "01212" "023" "023" "032" "043" "01211"
#> Prog_566 Prog_572 Prog_578 Prog_584 Prog_590 LT-HSC_152 Prog_554 Prog_561 Prog_567
#> "014" "032" "0413" "01211" "01221" "022" "031" "042" "01212"
#> Prog_573 Prog_579 Prog_585 Prog_591 LT-HSC_153 Prog_555 Prog_562 Prog_568 Prog_574
#> "023" "01223" "033" "023" "022" "031" "0112" "033" "01211"
#> Prog_580 Prog_586 Prog_592 LT-HSC_154 Prog_556 Prog_563 Prog_569 Prog_575 Prog_581
#> "031" "043" "01111" "02112" "033" "0213" "01311" "01113" "01222"
#> Prog_587 Prog_593 LT-HSC_155 Prog_557 Prog_564 Prog_570 Prog_576 Prog_582 Prog_588
#> "0132" "01222" "02111" "01222" "031" "0411" "014" "01223" "031"
#> Prog_594 LT-HSC_156 Prog_558 HSPC_601 HSPC_607 HSPC_613 HSPC_619 HSPC_625 HSPC_631
#> "033" "01222" "031" "042" "023" "042" "02112" "022" "0412"
#> LT-HSC_157 HSPC_595 HSPC_602 HSPC_608 HSPC_614 HSPC_620 HSPC_626 HSPC_632 LT-HSC_158
#> "023" "031" "022" "022" "042" "022" "023" "02112" "022"
#> HSPC_596 HSPC_603 HSPC_609 HSPC_615 HSPC_621 HSPC_627 HSPC_633 LT-HSC_159 HSPC_597
#> "042" "032" "023" "023" "02111" "042" "023" "0411" "042"
#> HSPC_604 HSPC_610 HSPC_616 HSPC_622 HSPC_628 HSPC_634 LT-HSC_160 HSPC_598 HSPC_605
#> "022" "022" "02111" "02111" "042" "042" "023" "042" "0213"
#> HSPC_611 HSPC_617 HSPC_623 HSPC_629 HSPC_635 LT-HSC_161 HSPC_599 HSPC_606 HSPC_612
#> "02112" "032" "042" "042" "042" "023" "022" "031" "031"
#> HSPC_618 HSPC_624 HSPC_630 HSPC_636 LT-HSC_162 HSPC_600 Prog_601 Prog_607 Prog_613
#> "022" "032" "022" "031" "023" "023" "02112" "01213" "033"
#> Prog_619 Prog_625 Prog_631 LT-HSC_163 Prog_595 Prog_602 Prog_608 Prog_614 Prog_620
#> "022" "0413" "032" "022" "022" "0132" "0112" "0132" "042"
#> Prog_626 Prog_632 LT-HSC_164 Prog_596 Prog_603 Prog_609 Prog_615 Prog_621 Prog_627
#> "01211" "01222" "031" "033" "0112" "01212" "0411" "01212" "031"
#> Prog_633 LT-HSC_165 Prog_597 Prog_604 Prog_610 Prog_616 Prog_622 Prog_628 Prog_634
#> "043" "022" "033" "033" "033" "01112" "01213" "01212" "043"
#> LT-HSC_166 Prog_598 Prog_605 Prog_611 Prog_617 Prog_623 Prog_629 Prog_635 LT-HSC_167
#> "042" "01212" "014" "033" "031" "0132" "01221" "033" "022"
#> Prog_599 Prog_606 Prog_612 Prog_618 Prog_624 Prog_630 Prog_636 LT-HSC_168 Prog_600
#> "01222" "031" "01311" "01222" "01222" "01312" "0213" "01311" "01222"
#> HSPC_643 HSPC_649 HSPC_655 HSPC_661 HSPC_667 HSPC_673 LT-HSC_169 HSPC_637 HSPC_644
#> "042" "032" "02121" "042" "022" "022" "023" "031" "0132"
#> HSPC_650 HSPC_656 HSPC_662 HSPC_668 HSPC_674 LT-HSC_170 HSPC_638 HSPC_645 HSPC_651
#> "02112" "022" "022" "032" "031" "042" "0132" "032" "0411"
#> HSPC_657 HSPC_663 HSPC_669 HSPC_675 LT-HSC_171 HSPC_639 HSPC_646 HSPC_652 HSPC_658
#> "023" "0412" "022" "02121" "042" "031" "031" "042" "0412"
#> HSPC_664 HSPC_670 HSPC_676 LT-HSC_172 HSPC_640 HSPC_647 HSPC_653 HSPC_659 HSPC_665
#> "032" "023" "022" "022" "031" "022" "02111" "02112" "042"
#> HSPC_671 HSPC_677 LT-HSC_173 HSPC_641 HSPC_648 HSPC_654 HSPC_660 HSPC_666 HSPC_672
#> "032" "023" "022" "031" "022" "042" "043" "0413" "032"
#> HSPC_678 LT-HSC_174 HSPC_642 Prog_643 Prog_649 Prog_655 Prog_661 Prog_667 Prog_673
#> "022" "031" "02112" "0412" "0112" "0112" "01312" "043" "042"
#> LT-HSC_175 Prog_637 Prog_644 Prog_650 Prog_656 Prog_662 Prog_668 Prog_674 LT-HSC_176
#> "02111" "014" "033" "01212" "033" "033" "023" "033" "022"
#> Prog_638 Prog_645 Prog_651 Prog_657 Prog_663 Prog_669 Prog_675 LT-HSC_177 Prog_639
#> "0112" "043" "031" "01112" "0112" "023" "01223" "022" "014"
#> Prog_646 Prog_652 Prog_658 Prog_664 Prog_670 Prog_676 LT-HSC_178 Prog_640 Prog_647
#> "01223" "01222" "01213" "023" "01211" "033" "02112" "01113" "043"
#> Prog_653 Prog_659 Prog_665 Prog_671 Prog_677 LT-HSC_179 Prog_641 Prog_648 Prog_654
#> "043" "033" "031" "031" "0112" "031" "023" "042" "0132"
#> Prog_660 Prog_666 Prog_672 Prog_678 LT-HSC_180 Prog_642 HSPC_685 HSPC_691 HSPC_697
#> "031" "033" "031" "0411" "043" "032" "0213" "02121" "0413"
#> HSPC_703 HSPC_709 HSPC_715 LT-HSC_181 HSPC_679 HSPC_686 HSPC_692 HSPC_698 HSPC_704
#> "022" "023" "02122" "02121" "031" "02112" "023" "022" "022"
#> HSPC_710 HSPC_716 LT-HSC_182 HSPC_680 HSPC_687 HSPC_693 HSPC_699 HSPC_705 HSPC_711
#> "02111" "022" "0213" "022" "023" "023" "022" "01213" "02111"
#> HSPC_717 LT-HSC_183 HSPC_681 HSPC_688 HSPC_694 HSPC_700 HSPC_706 HSPC_712 HSPC_718
#> "0412" "031" "042" "02111" "02111" "0413" "033" "02111" "02111"
#> LT-HSC_184 HSPC_682 HSPC_689 HSPC_695 HSPC_701 HSPC_707 HSPC_713 HSPC_719 LT-HSC_185
#> "031" "01213" "022" "0132" "042" "042" "02121" "022" "023"
#> HSPC_683 HSPC_690 HSPC_696 HSPC_702 HSPC_708 HSPC_714 HSPC_720 LT-HSC_186 HSPC_684
#> "0412" "022" "043" "022" "031" "022" "01213" "02111" "023"
#> Prog_685 Prog_691 Prog_697 Prog_703 Prog_709 Prog_715 LT-HSC_187 Prog_679 Prog_686
#> "01211" "0213" "0112" "043" "014" "01212" "031" "01223" "0413"
#> Prog_692 Prog_698 Prog_704 Prog_710 Prog_716 LT-HSC_188 Prog_680 Prog_687 Prog_693
#> "032" "01312" "031" "031" "033" "031" "01221" "01212" "01221"
#> Prog_699 Prog_705 Prog_711 Prog_717 LT-HSC_189 Prog_681 Prog_688 Prog_694 Prog_700
#> "01213" "01213" "033" "01212" "02111" "01312" "0112" "033" "01112"
#> Prog_706 Prog_712 Prog_718 LT-HSC_190 Prog_682 Prog_689 Prog_695 Prog_701 Prog_707
#> "01311" "0132" "01222" "023" "0132" "033" "01111" "01112" "033"
#> Prog_713 Prog_719 LT-HSC_191 Prog_683 Prog_690 Prog_696 Prog_702 Prog_708 Prog_714
#> "01311" "0112" "031" "023" "033" "0411" "014" "014" "014"
#> Prog_720 LT-HSC_192 Prog_684 HSPC_727 HSPC_733 HSPC_739 HSPC_745 HSPC_751 HSPC_757
#> "014" "01221" "032" "022" "022" "023" "023" "022" "022"
#> LT-HSC_193 HSPC_721 HSPC_728 HSPC_734 HSPC_740 HSPC_746 HSPC_752 HSPC_758 LT-HSC_194
#> "022" "023" "0213" "01213" "022" "023" "023" "032" "022"
#> HSPC_722 HSPC_729 HSPC_735 HSPC_741 HSPC_747 HSPC_753 HSPC_759 LT-HSC_195 HSPC_723
#> "031" "031" "042" "02112" "022" "031" "032" "032" "032"
#> HSPC_730 HSPC_736 HSPC_742 HSPC_748 HSPC_754 HSPC_760 LT-HSC_196 HSPC_724 HSPC_731
#> "031" "032" "032" "022" "0213" "042" "02111" "032" "0412"
#> HSPC_737 HSPC_743 HSPC_749 HSPC_755 HSPC_761 LT-HSC_197 HSPC_725 HSPC_732 HSPC_738
#> "01212" "031" "022" "031" "032" "022" "023" "032" "022"
#> HSPC_744 HSPC_750 HSPC_756 HSPC_762 LT-HSC_198 HSPC_726 Prog_727 Prog_733 Prog_739
#> "042" "031" "022" "042" "022" "0213" "01213" "033" "0412"
#> Prog_745 Prog_751 Prog_757 LT-HSC_199 Prog_721 Prog_728 Prog_734 Prog_740 Prog_746
#> "033" "033" "0412" "02112" "014" "032" "014" "033" "0411"
#> Prog_752 Prog_758 LT-HSC_200 Prog_722 Prog_729 Prog_735 Prog_741 Prog_747 Prog_753
#> "033" "033" "022" "014" "023" "01213" "0213" "033" "01311"
#> Prog_759 LT-HSC_201 Prog_723 Prog_730 Prog_736 Prog_742 Prog_748 Prog_754 Prog_760
#> "01212" "022" "0112" "0112" "01311" "0213" "0413" "01312" "01222"
#> LT-HSC_202 Prog_724 Prog_731 Prog_737 Prog_743 Prog_749 Prog_755 Prog_761 LT-HSC_203
#> "031" "033" "0112" "031" "01213" "043" "0213" "0412" "0213"
#> Prog_725 Prog_732 Prog_738 Prog_744 Prog_750 Prog_756 Prog_762 LT-HSC_204 Prog_726
#> "031" "043" "033" "033" "0413" "043" "031" "032" "031"
#> HSPC_769 HSPC_775 HSPC_781 HSPC_787 HSPC_793 HSPC_799 LT-HSC_205 HSPC_763 HSPC_770
#> "023" "023" "022" "023" "02121" "023" "023" "02121" "042"
#> HSPC_776 HSPC_782 HSPC_788 HSPC_794 HSPC_800 LT-HSC_206 HSPC_764 HSPC_771 HSPC_777
#> "023" "022" "023" "032" "0413" "022" "022" "032" "032"
#> HSPC_783 HSPC_789 HSPC_795 HSPC_801 LT-HSC_207 HSPC_765 HSPC_772 HSPC_778 HSPC_784
#> "022" "042" "032" "031" "042" "023" "042" "031" "031"
#> HSPC_790 HSPC_796 HSPC_802 LT-HSC_208 HSPC_766 HSPC_773 HSPC_779 HSPC_785 HSPC_791
#> "042" "01212" "022" "022" "01221" "032" "042" "031" "043"
#> HSPC_797 HSPC_803 LT-HSC_209 HSPC_767 HSPC_774 HSPC_780 HSPC_786 HSPC_792 HSPC_798
#> "032" "022" "02112" "01221" "032" "031" "031" "0213" "022"
#> HSPC_804 LT-HSC_210 HSPC_768 Prog_769 Prog_775 Prog_781 Prog_787 Prog_793 Prog_799
#> "022" "022" "023" "01223" "033" "01223" "043" "0132" "033"
#> LT-HSC_211 Prog_763 Prog_770 Prog_776 Prog_782 Prog_788 Prog_794 Prog_800 LT-HSC_212
#> "042" "01221" "014" "0112" "01221" "0112" "01222" "01223" "031"
#> Prog_764 Prog_771 Prog_777 Prog_783 Prog_789 Prog_795 Prog_801 LT-HSC_213 Prog_765
#> "01223" "014" "01211" "014" "01211" "01211" "0132" "022" "01311"
#> Prog_772 Prog_778 Prog_784 Prog_790 Prog_796 Prog_802 LT-HSC_214 Prog_766 Prog_773
#> "01223" "023" "032" "0112" "0412" "014" "031" "02122" "02122"
#> Prog_779 Prog_785 Prog_791 Prog_797 Prog_803 LT-HSC_215 Prog_767 Prog_774 Prog_780
#> "01311" "033" "01211" "031" "043" "032" "01113" "01212" "01113"
#> Prog_786 Prog_792 Prog_798 Prog_804 LT-HSC_216 Prog_768 HSPC_811 HSPC_817 HSPC_823
#> "01113" "01312" "01311" "01212" "0411" "01221" "02122" "02122" "02121"
#> HSPC_829 HSPC_835 HSPC_841 HSPC_847 HSPC_805 HSPC_812 HSPC_818 HSPC_824 HSPC_830
#> "0213" "032" "043" "023" "02122" "01221" "031" "031" "02121"
#> HSPC_836 HSPC_842 HSPC_848 HSPC_806 HSPC_813 HSPC_819 HSPC_825 HSPC_831 HSPC_837
#> "023" "023" "022" "023" "01221" "042" "031" "031" "0412"
#> HSPC_843 HSPC_849 HSPC_807 HSPC_814 HSPC_820 HSPC_826 HSPC_832 HSPC_838 HSPC_844
#> "031" "022" "01212" "0413" "01221" "031" "032" "032" "022"
#> HSPC_850 HSPC_808 HSPC_815 HSPC_821 HSPC_827 HSPC_833 HSPC_839 HSPC_845 HSPC_851
#> "02111" "01221" "032" "042" "022" "01221" "0413" "031" "023"
#> HSPC_809 HSPC_816 HSPC_822 HSPC_828 HSPC_834 HSPC_840 HSPC_846 HSPC_852 HSPC_810
#> "022" "042" "031" "032" "032" "022" "042" "022" "022"
#> Prog_811 Prog_817 Prog_823 Prog_829 Prog_835 Prog_841 Prog_847 Prog_805 Prog_812
#> "014" "0132" "031" "01212" "014" "0411" "01223" "042" "023"
#> Prog_818 Prog_824 Prog_830 Prog_836 Prog_842 Prog_848 Prog_806 Prog_813 Prog_819
#> "014" "01223" "0112" "01311" "014" "022" "033" "0112" "0112"
#> Prog_825 Prog_831 Prog_837 Prog_843 Prog_849 Prog_807 Prog_814 Prog_820 Prog_826
#> "01113" "014" "014" "01312" "042" "014" "0112" "0132" "0112"
#> Prog_832 Prog_838 Prog_844 Prog_850 Prog_808 Prog_815 Prog_821 Prog_827 Prog_833
#> "01211" "0112" "014" "014" "01212" "014" "01113" "033" "01221"
#> Prog_839 Prog_845 Prog_851 Prog_809 Prog_816 Prog_822 Prog_828 Prog_834 Prog_840
#> "01311" "01311" "033" "0132" "01223" "01113" "01113" "01212" "01212"
#> Prog_846 Prog_852 Prog_810
#> "01211" "0411" "01311"
get_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 999))
#> HSPC_007 HSPC_013 HSPC_019 HSPC_025 HSPC_031 HSPC_037 LT-HSC_001 HSPC_001 HSPC_008
#> "0213" "023" "02112" "042" "032" "042" "023" "01221" "042"
#> HSPC_014 HSPC_020 HSPC_026 HSPC_032 HSPC_038 LT-HSC_002 HSPC_002 HSPC_009 HSPC_015
#> "022" "042" "0412" "02111" "022" "042" "022" "022" "023"
#> HSPC_021 HSPC_027 HSPC_033 HSPC_039 LT-HSC_003 HSPC_003 HSPC_010 HSPC_016 HSPC_022
#> "022" "033" "031" "02112" "023" "01213" "0213" "01221" "0412"
#> HSPC_028 HSPC_034 HSPC_040 LT-HSC_004 HSPC_004 HSPC_011 HSPC_017 HSPC_023 HSPC_029
#> "031" "01213" "032" "022" "031" "042" "022" "042" "02112"
#> HSPC_035 HSPC_041 LT-HSC_005 HSPC_005 HSPC_012 HSPC_018 HSPC_024 HSPC_030 HSPC_036
#> "022" "042" "02112" "02112" "042" "042" "022" "031" "01212"
#> HSPC_042 LT-HSC_006 HSPC_006 Prog_007 Prog_013 Prog_019 Prog_025 Prog_031 Prog_037
#> "032" "022" "0412" "01223" "01212" "0131" "0411" "033" "033"
#> LT-HSC_007 Prog_001 Prog_008 Prog_014 Prog_020 Prog_026 Prog_032 Prog_038 LT-HSC_008
#> "042" "043" "01112" "0112" "014" "033" "014" "014" "031"
#> Prog_002 Prog_009 Prog_015 Prog_021 Prog_027 Prog_033 Prog_039 LT-HSC_009 Prog_003
#> "01213" "01112" "01212" "014" "01222" "0112" "01112" "022" "01222"
#> Prog_010 Prog_016 Prog_022 Prog_028 Prog_034 Prog_040 LT-HSC_010 Prog_004 Prog_011
#> "0412" "0411" "0411" "0112" "02112" "042" "0412" "033" "014"
#> Prog_017 Prog_023 Prog_029 Prog_035 Prog_041 LT-HSC_011 Prog_005 Prog_012 Prog_018
#> "01211" "01222" "014" "01111" "0213" "0213" "0213" "022" "022"
#> Prog_024 Prog_030 Prog_036 Prog_042 LT-HSC_012 Prog_006 HSPC_049 HSPC_055 HSPC_061
#> "014" "0411" "0412" "0411" "0411" "01111" "031" "042" "042"
#> HSPC_067 HSPC_073 HSPC_079 LT-HSC_013 HSPC_043 HSPC_050 HSPC_056 HSPC_062 HSPC_068
#> "042" "022" "0412" "022" "042" "043" "022" "0413" "022"
#> HSPC_074 HSPC_080 LT-HSC_014 HSPC_044 HSPC_051 HSPC_057 HSPC_063 HSPC_069 HSPC_075
#> "022" "032" "022" "043" "032" "022" "0412" "032" "022"
#> HSPC_081 LT-HSC_015 HSPC_045 HSPC_052 HSPC_058 HSPC_064 HSPC_070 HSPC_076 HSPC_082
#> "032" "022" "042" "043" "031" "0413" "033" "032" "042"
#> LT-HSC_016 HSPC_046 HSPC_053 HSPC_059 HSPC_065 HSPC_071 HSPC_077 HSPC_083 LT-HSC_017
#> "022" "032" "01212" "02112" "032" "0413" "01212" "022" "022"
#> HSPC_047 HSPC_054 HSPC_060 HSPC_066 HSPC_072 HSPC_078 HSPC_084 LT-HSC_018 HSPC_048
#> "023" "031" "031" "031" "0413" "043" "042" "022" "032"
#> Prog_049 Prog_055 Prog_061 Prog_067 Prog_073 Prog_079 LT-HSC_019 Prog_043 Prog_050
#> "01112" "01211" "0112" "014" "032" "01112" "02112" "0132" "01211"
#> Prog_056 Prog_062 Prog_068 Prog_074 Prog_080 LT-HSC_020 Prog_044 Prog_051 Prog_057
#> "01222" "042" "032" "0411" "043" "031" "032" "014" "0131"
#> Prog_063 Prog_069 Prog_075 Prog_081 LT-HSC_021 Prog_045 Prog_052 Prog_058 Prog_064
#> "043" "01222" "01211" "01112" "0413" "0132" "043" "014" "014"
#> Prog_070 Prog_076 Prog_082 LT-HSC_022 Prog_046 Prog_053 Prog_059 Prog_065 Prog_071
#> "0412" "014" "01111" "022" "0112" "0112" "01222" "0131" "01223"
#> Prog_077 Prog_083 LT-HSC_023 Prog_047 Prog_054 Prog_060 Prog_066 Prog_072 Prog_078
#> "01222" "01212" "022" "01211" "0411" "0213" "014" "033" "014"
#> Prog_084 LT-HSC_024 Prog_048 HSPC_091 HSPC_097 HSPC_103 HSPC_109 HSPC_115 HSPC_121
#> "0112" "033" "032" "02122" "023" "022" "043" "022" "023"
#> LT-HSC_025 HSPC_085 HSPC_092 HSPC_098 HSPC_104 HSPC_110 HSPC_116 HSPC_122 LT-HSC_026
#> "02121" "042" "02121" "043" "023" "043" "02111" "031" "022"
#> HSPC_086 HSPC_093 HSPC_099 HSPC_105 HSPC_111 HSPC_117 HSPC_123 LT-HSC_027 HSPC_087
#> "02112" "02112" "042" "022" "022" "042" "022" "023" "022"
#> HSPC_094 HSPC_100 HSPC_106 HSPC_112 HSPC_118 HSPC_124 LT-HSC_028 HSPC_088 HSPC_095
#> "01221" "032" "022" "02111" "031" "02111" "032" "032" "022"
#> HSPC_101 HSPC_107 HSPC_113 HSPC_119 HSPC_125 LT-HSC_029 HSPC_089 HSPC_096 HSPC_102
#> "01213" "042" "023" "023" "031" "02122" "032" "043" "01211"
#> HSPC_108 HSPC_114 HSPC_120 HSPC_126 LT-HSC_030 HSPC_090 Prog_091 Prog_097 Prog_103
#> "031" "032" "031" "032" "02121" "01221" "01111" "01211" "01221"
#> Prog_109 Prog_115 Prog_121 LT-HSC_031 Prog_085 Prog_092 Prog_098 Prog_104 Prog_110
#> "0412" "014" "0213" "032" "01222" "033" "0112" "02111" "01112"
#> Prog_116 Prog_122 LT-HSC_032 Prog_086 Prog_093 Prog_099 Prog_105 Prog_111 Prog_117
#> "01221" "033" "01111" "02122" "01223" "01222" "01211" "014" "0132"
#> Prog_123 LT-HSC_033 Prog_087 Prog_094 Prog_100 Prog_106 Prog_112 Prog_118 Prog_124
#> "01211" "031" "01211" "014" "0112" "031" "01112" "0412" "033"
#> LT-HSC_034 Prog_088 Prog_095 Prog_101 Prog_107 Prog_113 Prog_119 Prog_125 LT-HSC_035
#> "031" "043" "0112" "0131" "01112" "01223" "01111" "031" "02122"
#> Prog_089 Prog_096 Prog_102 Prog_108 Prog_114 Prog_120 Prog_126 LT-HSC_036 Prog_090
#> "014" "032" "031" "0411" "0413" "023" "014" "033" "0112"
#> HSPC_133 HSPC_139 HSPC_145 HSPC_151 HSPC_157 HSPC_163 LT-HSC_037 HSPC_127 HSPC_134
#> "022" "022" "023" "042" "043" "023" "023" "0412" "023"
#> HSPC_140 HSPC_146 HSPC_152 HSPC_158 HSPC_164 LT-HSC_038 HSPC_128 HSPC_135 HSPC_141
#> "023" "0412" "022" "042" "022" "023" "023" "031" "022"
#> HSPC_147 HSPC_153 HSPC_159 HSPC_165 LT-HSC_039 HSPC_129 HSPC_136 HSPC_142 HSPC_148
#> "023" "022" "042" "043" "022" "02111" "042" "042" "043"
#> HSPC_154 HSPC_160 HSPC_166 LT-HSC_040 HSPC_130 HSPC_137 HSPC_143 HSPC_149 HSPC_155
#> "043" "02112" "042" "022" "042" "02111" "022" "022" "023"
#> HSPC_161 HSPC_167 LT-HSC_041 HSPC_131 HSPC_138 HSPC_144 HSPC_150 HSPC_156 HSPC_162
#> "042" "023" "022" "022" "01221" "031" "02111" "01221" "032"
#> HSPC_168 LT-HSC_042 HSPC_132 Prog_133 Prog_139 Prog_145 Prog_151 Prog_157 Prog_163
#> "0413" "022" "0132" "01211" "0112" "01213" "032" "01222" "01113"
#> LT-HSC_043 Prog_127 Prog_134 Prog_140 Prog_146 Prog_152 Prog_158 Prog_164 LT-HSC_044
#> "0132" "032" "043" "01111" "01113" "043" "01112" "0213" "043"
#> Prog_128 Prog_135 Prog_141 Prog_147 Prog_153 Prog_159 Prog_165 LT-HSC_045 Prog_129
#> "01211" "032" "0132" "02112" "01222" "0412" "043" "0412" "0131"
#> Prog_136 Prog_142 Prog_148 Prog_154 Prog_160 Prog_166 LT-HSC_046 Prog_130 Prog_137
#> "0132" "033" "023" "033" "022" "014" "031" "0131" "01222"
#> Prog_143 Prog_149 Prog_155 Prog_161 Prog_167 LT-HSC_047 Prog_131 Prog_138 Prog_144
#> "0131" "0413" "01211" "033" "01212" "0213" "033" "02111" "043"
#> Prog_150 Prog_156 Prog_162 Prog_168 LT-HSC_048 Prog_132 HSPC_175 HSPC_181 HSPC_187
#> "0131" "02122" "0412" "0131" "023" "0131" "042" "022" "022"
#> HSPC_193 HSPC_199 HSPC_205 LT-HSC_049 HSPC_169 HSPC_176 HSPC_182 HSPC_188 HSPC_194
#> "033" "031" "022" "022" "042" "022" "023" "02111" "02112"
#> HSPC_200 HSPC_206 LT-HSC_050 HSPC_170 HSPC_177 HSPC_183 HSPC_189 HSPC_195 HSPC_201
#> "022" "01223" "022" "023" "022" "033" "031" "01213" "02112"
#> HSPC_207 LT-HSC_051 HSPC_171 HSPC_178 HSPC_184 HSPC_190 HSPC_196 HSPC_202 HSPC_208
#> "032" "022" "022" "031" "02121" "0413" "042" "032" "022"
#> LT-HSC_052 HSPC_172 HSPC_179 HSPC_185 HSPC_191 HSPC_197 HSPC_203 HSPC_209 LT-HSC_053
#> "01221" "01221" "01221" "023" "022" "02112" "042" "02112" "02112"
#> HSPC_173 HSPC_180 HSPC_186 HSPC_192 HSPC_198 HSPC_204 HSPC_210 LT-HSC_054 HSPC_174
#> "023" "043" "033" "022" "031" "0412" "043" "022" "031"
#> Prog_175 Prog_181 Prog_187 Prog_193 Prog_199 Prog_205 LT-HSC_055 Prog_169 Prog_176
#> "0411" "02112" "033" "042" "032" "0413" "0132" "02112" "01221"
#> Prog_182 Prog_188 Prog_194 Prog_200 Prog_206 LT-HSC_056 Prog_170 Prog_177 Prog_183
#> "043" "014" "023" "043" "01222" "0131" "01112" "042" "0132"
#> Prog_189 Prog_195 Prog_201 Prog_207 LT-HSC_057 Prog_171 Prog_178 Prog_184 Prog_190
#> "01222" "042" "0412" "014" "031" "042" "0112" "0131" "01211"
#> Prog_196 Prog_202 Prog_208 LT-HSC_058 Prog_172 Prog_179 Prog_185 Prog_191 Prog_197
#> "01111" "0213" "033" "032" "014" "0131" "01111" "033" "0131"
#> Prog_203 Prog_209 LT-HSC_059 Prog_173 Prog_180 Prog_186 Prog_192 Prog_198 Prog_204
#> "0132" "0131" "02122" "043" "032" "01223" "01211" "02112" "023"
#> Prog_210 LT-HSC_060 Prog_174 HSPC_217 HSPC_223 HSPC_229 HSPC_235 HSPC_241 HSPC_247
#> "032" "0131" "0213" "02122" "022" "023" "022" "02112" "023"
#> LT-HSC_061 HSPC_211 HSPC_218 HSPC_224 HSPC_230 HSPC_236 HSPC_242 HSPC_248 LT-HSC_062
#> "02121" "042" "022" "022" "042" "043" "023" "022" "023"
#> HSPC_212 HSPC_219 HSPC_225 HSPC_231 HSPC_237 HSPC_243 HSPC_249 LT-HSC_063 HSPC_213
#> "023" "042" "022" "023" "022" "0412" "022" "033" "0413"
#> HSPC_220 HSPC_226 HSPC_232 HSPC_238 HSPC_244 HSPC_250 LT-HSC_064 HSPC_214 HSPC_221
#> "022" "02112" "023" "02122" "032" "0413" "0112" "01213" "031"
#> HSPC_227 HSPC_233 HSPC_239 HSPC_245 HSPC_251 LT-HSC_065 HSPC_215 HSPC_222 HSPC_228
#> "022" "042" "022" "022" "0413" "031" "0412" "042" "023"
#> HSPC_234 HSPC_240 HSPC_246 HSPC_252 LT-HSC_066 HSPC_216 Prog_217 Prog_223 Prog_229
#> "02112" "031" "022" "0213" "031" "01213" "01111" "042" "01112"
#> Prog_235 Prog_241 Prog_247 LT-HSC_067 Prog_211 Prog_218 Prog_224 Prog_230 Prog_236
#> "023" "022" "033" "0213" "0112" "01222" "0132" "0413" "01213"
#> Prog_242 Prog_248 LT-HSC_068 Prog_212 Prog_219 Prog_225 Prog_231 Prog_237 Prog_243
#> "014" "043" "01221" "014" "0213" "033" "0132" "042" "0131"
#> Prog_249 LT-HSC_069 Prog_213 Prog_220 Prog_226 Prog_232 Prog_238 Prog_244 Prog_250
#> "01111" "032" "043" "0213" "031" "033" "01211" "032" "014"
#> LT-HSC_070 Prog_214 Prog_221 Prog_227 Prog_233 Prog_239 Prog_245 Prog_251 LT-HSC_071
#> "043" "0413" "01111" "0132" "01222" "01111" "01211" "02122" "032"
#> Prog_215 Prog_222 Prog_228 Prog_234 Prog_240 Prog_246 Prog_252 LT-HSC_072 Prog_216
#> "01113" "032" "0131" "01212" "01221" "033" "032" "01211" "01113"
#> HSPC_259 HSPC_265 HSPC_271 HSPC_277 HSPC_283 HSPC_289 LT-HSC_073 HSPC_253 HSPC_260
#> "023" "022" "0412" "023" "022" "022" "023" "0413" "02112"
#> HSPC_266 HSPC_272 HSPC_278 HSPC_284 HSPC_290 LT-HSC_074 HSPC_254 HSPC_261 HSPC_267
#> "022" "02112" "042" "02112" "0413" "022" "022" "0132" "031"
#> HSPC_273 HSPC_279 HSPC_285 HSPC_291 LT-HSC_075 HSPC_255 HSPC_262 HSPC_268 HSPC_274
#> "02112" "043" "01213" "033" "031" "032" "02121" "01212" "022"
#> HSPC_280 HSPC_286 HSPC_292 LT-HSC_076 HSPC_256 HSPC_263 HSPC_269 HSPC_275 HSPC_281
#> "0412" "042" "0412" "042" "0112" "0412" "0132" "0131" "023"
#> HSPC_287 HSPC_293 LT-HSC_077 HSPC_257 HSPC_264 HSPC_270 HSPC_276 HSPC_282 HSPC_288
#> "0413" "0412" "023" "0413" "022" "032" "032" "01212" "01212"
#> HSPC_294 LT-HSC_078 HSPC_258 Prog_259 Prog_265 Prog_271 Prog_277 Prog_283 Prog_289
#> "0413" "022" "01222" "031" "0112" "033" "031" "042" "0412"
#> LT-HSC_079 Prog_253 Prog_260 Prog_266 Prog_272 Prog_278 Prog_284 Prog_290 LT-HSC_080
#> "02112" "014" "01223" "01221" "01223" "0112" "014" "0112" "032"
#> Prog_254 Prog_261 Prog_267 Prog_273 Prog_279 Prog_285 Prog_291 LT-HSC_081 Prog_255
#> "0112" "014" "0131" "0131" "01112" "014" "0411" "01221" "01211"
#> Prog_262 Prog_268 Prog_274 Prog_280 Prog_286 Prog_292 LT-HSC_082 Prog_256 Prog_263
#> "01223" "01223" "014" "033" "0112" "01222" "032" "042" "0131"
#> Prog_269 Prog_275 Prog_281 Prog_287 Prog_293 LT-HSC_083 Prog_257 Prog_264 Prog_270
#> "0112" "01223" "014" "0131" "033" "02121" "0213" "023" "0131"
#> Prog_276 Prog_282 Prog_288 Prog_294 LT-HSC_084 Prog_258 HSPC_301 HSPC_307 HSPC_313
#> "01212" "01113" "0112" "01222" "033" "0132" "023" "022" "042"
#> HSPC_319 HSPC_325 HSPC_331 LT-HSC_085 HSPC_295 HSPC_302 HSPC_308 HSPC_314 HSPC_320
#> "02122" "022" "022" "022" "0413" "023" "043" "042" "043"
#> HSPC_326 HSPC_332 LT-HSC_086 HSPC_296 HSPC_303 HSPC_309 HSPC_315 HSPC_321 HSPC_327
#> "022" "01211" "042" "022" "01221" "022" "022" "042" "01212"
#> HSPC_333 LT-HSC_087 HSPC_297 HSPC_304 HSPC_310 HSPC_316 HSPC_322 HSPC_328 HSPC_334
#> "01213" "02122" "022" "032" "022" "023" "031" "042" "022"
#> LT-HSC_088 HSPC_298 HSPC_305 HSPC_311 HSPC_317 HSPC_323 HSPC_329 HSPC_335 LT-HSC_089
#> "043" "032" "0412" "02122" "023" "031" "042" "022" "022"
#> HSPC_299 HSPC_306 HSPC_312 HSPC_318 HSPC_324 HSPC_330 HSPC_336 LT-HSC_090 HSPC_300
#> "033" "033" "0413" "022" "031" "031" "022" "032" "01221"
#> Prog_301 Prog_307 Prog_313 Prog_319 Prog_325 Prog_331 LT-HSC_091 Prog_295 Prog_302
#> "0411" "0412" "0413" "0132" "01211" "01212" "01111" "0412" "02122"
#> Prog_308 Prog_314 Prog_320 Prog_326 Prog_332 LT-HSC_092 Prog_296 Prog_303 Prog_309
#> "01223" "033" "01221" "01111" "01222" "02122" "01222" "022" "022"
#> Prog_315 Prog_321 Prog_327 Prog_333 LT-HSC_093 Prog_297 Prog_304 Prog_310 Prog_316
#> "0411" "0411" "01211" "043" "042" "043" "01211" "0412" "0411"
#> Prog_322 Prog_328 Prog_334 LT-HSC_094 Prog_298 Prog_305 Prog_311 Prog_317 Prog_323
#> "043" "0411" "014" "042" "014" "0413" "043" "02122" "0411"
#> Prog_329 Prog_335 LT-HSC_095 Prog_299 Prog_306 Prog_312 Prog_318 Prog_324 Prog_330
#> "0411" "0413" "01112" "0112" "022" "01111" "01111" "0112" "0132"
#> Prog_336 LT-HSC_096 Prog_300 HSPC_343 HSPC_349 HSPC_355 HSPC_361 HSPC_367 HSPC_373
#> "0132" "01212" "0131" "0132" "031" "0213" "023" "022" "023"
#> LT-HSC_097 HSPC_337 HSPC_344 HSPC_350 HSPC_356 HSPC_362 HSPC_368 HSPC_374 LT-HSC_098
#> "02121" "022" "0412" "022" "043" "0411" "042" "032" "0112"
#> HSPC_338 HSPC_345 HSPC_351 HSPC_357 HSPC_363 HSPC_369 HSPC_375 LT-HSC_099 HSPC_339
#> "01112" "043" "043" "02111" "022" "02111" "02111" "023" "032"
#> HSPC_346 HSPC_352 HSPC_358 HSPC_364 HSPC_370 HSPC_376 LT-HSC_100 HSPC_340 HSPC_347
#> "01213" "0412" "042" "042" "0131" "042" "01112" "0213" "02112"
#> HSPC_353 HSPC_359 HSPC_365 HSPC_371 HSPC_377 LT-HSC_101 HSPC_341 HSPC_348 HSPC_354
#> "01212" "032" "023" "01212" "0413" "0411" "01221" "033" "022"
#> HSPC_360 HSPC_366 HSPC_372 HSPC_378 LT-HSC_102 HSPC_342 Prog_343 Prog_349 Prog_355
#> "042" "0213" "042" "02121" "01112" "0131" "0132" "0411" "0413"
#> Prog_361 Prog_367 Prog_373 LT-HSC_103 Prog_337 Prog_344 Prog_350 Prog_356 Prog_362
#> "014" "0131" "01113" "0132" "01111" "02112" "014" "0112" "0412"
#> Prog_368 Prog_374 LT-HSC_104 Prog_338 Prog_345 Prog_351 Prog_357 Prog_363 Prog_369
#> "014" "014" "02122" "01221" "0411" "014" "01112" "014" "0411"
#> Prog_375 LT-HSC_105 Prog_339 Prog_346 Prog_352 Prog_358 Prog_364 Prog_370 Prog_376
#> "01112" "0411" "0112" "014" "01112" "031" "0112" "0411" "0112"
#> LT-HSC_106 Prog_340 Prog_347 Prog_353 Prog_359 Prog_365 Prog_371 Prog_377 LT-HSC_107
#> "0412" "014" "0213" "0132" "0112" "0213" "01212" "01111" "023"
#> Prog_341 Prog_348 Prog_354 Prog_360 Prog_366 Prog_372 Prog_378 LT-HSC_108 Prog_342
#> "01212" "02121" "0412" "01112" "014" "0112" "032" "01211" "01112"
#> HSPC_385 HSPC_391 HSPC_397 HSPC_403 HSPC_409 HSPC_415 HSPC_421 HSPC_379 HSPC_386
#> "02111" "031" "02111" "042" "023" "023" "043" "02121" "042"
#> HSPC_392 HSPC_398 HSPC_404 HSPC_410 HSPC_416 HSPC_422 HSPC_380 HSPC_387 HSPC_393
#> "032" "032" "0112" "01212" "031" "032" "032" "0412" "0411"
#> HSPC_399 HSPC_405 HSPC_411 HSPC_417 HSPC_423 HSPC_381 HSPC_388 HSPC_394 HSPC_400
#> "031" "032" "01212" "01221" "01221" "02112" "01221" "02111" "0412"
#> HSPC_406 HSPC_412 HSPC_418 HSPC_424 HSPC_382 HSPC_389 HSPC_395 HSPC_401 HSPC_407
#> "042" "0131" "031" "0413" "01221" "014" "043" "02111" "0131"
#> HSPC_413 HSPC_419 HSPC_425 HSPC_383 HSPC_390 HSPC_396 HSPC_402 HSPC_408 HSPC_414
#> "042" "0131" "0413" "022" "042" "032" "032" "01111" "02112"
#> HSPC_420 HSPC_426 HSPC_384 Prog_385 Prog_391 Prog_397 Prog_403 Prog_409 Prog_415
#> "01221" "042" "02112" "01111" "0213" "01112" "0112" "01112" "01112"
#> Prog_421 Prog_379 Prog_386 Prog_392 Prog_398 Prog_404 Prog_410 Prog_416 Prog_422
#> "01112" "0112" "01112" "01222" "01112" "01113" "0112" "0112" "0413"
#> Prog_380 Prog_387 Prog_393 Prog_399 Prog_405 Prog_411 Prog_417 Prog_423 Prog_381
#> "0112" "0131" "0112" "01223" "01223" "042" "0411" "0412" "0112"
#> Prog_388 Prog_394 Prog_400 Prog_406 Prog_412 Prog_418 Prog_424 Prog_382 Prog_389
#> "01112" "033" "02111" "0112" "01213" "014" "0112" "031" "0132"
#> Prog_395 Prog_401 Prog_407 Prog_413 Prog_419 Prog_425 Prog_383 Prog_390 Prog_396
#> "01112" "0132" "033" "01212" "01112" "014" "01111" "043" "014"
#> Prog_402 Prog_408 Prog_414 Prog_420 Prog_426 Prog_384 HSPC_433 HSPC_439 HSPC_445
#> "0412" "014" "0131" "01212" "01211" "0411" "02121" "02121" "02121"
#> HSPC_451 HSPC_457 HSPC_463 LT-HSC_109 HSPC_427 HSPC_434 HSPC_440 HSPC_446 HSPC_452
#> "023" "022" "032" "022" "023" "0213" "042" "022" "02111"
#> HSPC_458 HSPC_464 LT-HSC_110 HSPC_428 HSPC_435 HSPC_441 HSPC_447 HSPC_453 HSPC_459
#> "02112" "02112" "031" "02121" "031" "031" "033" "032" "031"
#> HSPC_465 LT-HSC_111 HSPC_429 HSPC_436 HSPC_442 HSPC_448 HSPC_454 HSPC_460 HSPC_466
#> "031" "022" "02111" "0132" "01221" "031" "0132" "031" "042"
#> LT-HSC_112 HSPC_430 HSPC_437 HSPC_443 HSPC_449 HSPC_455 HSPC_461 HSPC_467 LT-HSC_113
#> "032" "031" "02112" "031" "031" "022" "042" "031" "032"
#> HSPC_431 HSPC_438 HSPC_444 HSPC_450 HSPC_456 HSPC_462 HSPC_468 LT-HSC_114 HSPC_432
#> "031" "0213" "022" "022" "01221" "031" "031" "023" "022"
#> Prog_433 Prog_439 Prog_445 Prog_451 Prog_457 Prog_463 LT-HSC_115 Prog_427 Prog_434
#> "031" "033" "032" "0131" "014" "033" "01221" "022" "01111"
#> Prog_440 Prog_446 Prog_452 Prog_458 Prog_464 LT-HSC_116 Prog_428 Prog_435 Prog_441
#> "043" "032" "02121" "043" "032" "031" "01221" "0411" "01211"
#> Prog_447 Prog_453 Prog_459 Prog_465 LT-HSC_117 Prog_429 Prog_436 Prog_442 Prog_448
#> "01223" "014" "033" "043" "031" "01111" "01221" "02112" "033"
#> Prog_454 Prog_460 Prog_466 LT-HSC_118 Prog_430 Prog_437 Prog_443 Prog_449 Prog_455
#> "0412" "042" "0411" "02112" "0112" "0132" "0131" "01111" "031"
#> Prog_461 Prog_467 LT-HSC_119 Prog_431 Prog_438 Prog_444 Prog_450 Prog_456 Prog_462
#> "022" "033" "0213" "033" "022" "01111" "01222" "01223" "042"
#> Prog_468 LT-HSC_120 Prog_432 HSPC_475 HSPC_481 HSPC_487 HSPC_493 HSPC_499 HSPC_505
#> "0411" "0413" "043" "022" "023" "02121" "022" "022" "042"
#> LT-HSC_121 HSPC_469 HSPC_476 HSPC_482 HSPC_488 HSPC_494 HSPC_500 HSPC_506 LT-HSC_122
#> "0213" "023" "02111" "022" "022" "022" "022" "022" "042"
#> HSPC_470 HSPC_477 HSPC_483 HSPC_489 HSPC_495 HSPC_501 HSPC_507 LT-HSC_123 HSPC_471
#> "022" "01221" "022" "042" "043" "023" "022" "022" "022"
#> HSPC_478 HSPC_484 HSPC_490 HSPC_496 HSPC_502 HSPC_508 LT-HSC_124 HSPC_472 HSPC_479
#> "022" "02112" "031" "031" "032" "0131" "031" "032" "031"
#> HSPC_485 HSPC_491 HSPC_497 HSPC_503 HSPC_509 LT-HSC_125 HSPC_473 HSPC_480 HSPC_486
#> "01212" "0412" "022" "01212" "042" "031" "031" "032" "042"
#> HSPC_492 HSPC_498 HSPC_504 HSPC_510 LT-HSC_126 HSPC_474 Prog_475 Prog_481 Prog_487
#> "032" "031" "022" "0412" "032" "032" "0131" "033" "0131"
#> Prog_493 Prog_499 Prog_505 LT-HSC_127 Prog_469 Prog_476 Prog_482 Prog_488 Prog_494
#> "01222" "01212" "0131" "02122" "042" "01213" "01222" "0131" "043"
#> Prog_500 Prog_506 LT-HSC_128 Prog_470 Prog_477 Prog_483 Prog_489 Prog_495 Prog_501
#> "0131" "01211" "031" "01213" "0112" "043" "01211" "032" "01223"
#> Prog_507 LT-HSC_129 Prog_471 Prog_478 Prog_484 Prog_490 Prog_496 Prog_502 Prog_508
#> "0411" "02112" "01222" "01113" "01223" "043" "033" "0112" "01113"
#> LT-HSC_130 Prog_472 Prog_479 Prog_485 Prog_491 Prog_497 Prog_503 Prog_509 LT-HSC_131
#> "0132" "043" "01222" "0132" "0131" "0411" "043" "031" "031"
#> Prog_473 Prog_480 Prog_486 Prog_492 Prog_498 Prog_504 Prog_510 LT-HSC_132 Prog_474
#> "01223" "023" "01211" "031" "0213" "01213" "042" "014" "032"
#> HSPC_517 HSPC_523 HSPC_529 HSPC_535 HSPC_541 HSPC_547 LT-HSC_133 HSPC_511 HSPC_518
#> "023" "032" "02111" "022" "022" "032" "02121" "023" "022"
#> HSPC_524 HSPC_530 HSPC_536 HSPC_542 HSPC_548 LT-HSC_134 HSPC_512 HSPC_519 HSPC_525
#> "022" "022" "02111" "02111" "022" "023" "032" "02112" "023"
#> HSPC_531 HSPC_537 HSPC_543 HSPC_549 LT-HSC_135 HSPC_513 HSPC_520 HSPC_526 HSPC_532
#> "022" "042" "042" "022" "022" "02121" "042" "031" "042"
#> HSPC_538 HSPC_544 HSPC_550 LT-HSC_136 HSPC_514 HSPC_521 HSPC_527 HSPC_533 HSPC_539
#> "031" "01213" "042" "023" "031" "022" "01221" "032" "022"
#> HSPC_545 HSPC_551 LT-HSC_137 HSPC_515 HSPC_522 HSPC_528 HSPC_534 HSPC_540 HSPC_546
#> "022" "042" "022" "031" "022" "0413" "031" "032" "022"
#> HSPC_552 LT-HSC_138 HSPC_516 Prog_517 Prog_523 Prog_529 Prog_535 Prog_541 Prog_547
#> "042" "022" "032" "033" "0112" "0131" "0112" "0131" "0132"
#> LT-HSC_139 Prog_511 Prog_518 Prog_524 Prog_530 Prog_536 Prog_542 Prog_548 LT-HSC_140
#> "031" "031" "0413" "042" "01213" "0112" "0413" "0112" "022"
#> Prog_512 Prog_519 Prog_525 Prog_531 Prog_537 Prog_543 Prog_549 LT-HSC_141 Prog_513
#> "0411" "042" "043" "0131" "022" "014" "0413" "02111" "033"
#> Prog_520 Prog_526 Prog_532 Prog_538 Prog_544 Prog_550 LT-HSC_142 Prog_514 Prog_521
#> "0131" "023" "022" "02121" "023" "01213" "01213" "01223" "01213"
#> Prog_527 Prog_533 Prog_539 Prog_545 Prog_551 LT-HSC_143 Prog_515 Prog_522 Prog_528
#> "01213" "022" "0411" "014" "01212" "0132" "043" "022" "014"
#> Prog_534 Prog_540 Prog_546 Prog_552 LT-HSC_144 Prog_516 HSPC_559 HSPC_565 HSPC_571
#> "043" "023" "023" "0412" "042" "01111" "022" "023" "031"
#> HSPC_577 HSPC_583 HSPC_589 LT-HSC_145 HSPC_553 HSPC_560 HSPC_566 HSPC_572 HSPC_578
#> "022" "02111" "022" "022" "0131" "022" "022" "023" "022"
#> HSPC_584 HSPC_590 LT-HSC_146 HSPC_554 HSPC_561 HSPC_567 HSPC_573 HSPC_579 HSPC_585
#> "022" "042" "031" "022" "02111" "031" "022" "031" "022"
#> HSPC_591 LT-HSC_147 HSPC_555 HSPC_562 HSPC_568 HSPC_574 HSPC_580 HSPC_586 HSPC_592
#> "023" "022" "022" "023" "022" "01213" "032" "032" "031"
#> LT-HSC_148 HSPC_556 HSPC_563 HSPC_569 HSPC_575 HSPC_581 HSPC_587 HSPC_593 LT-HSC_149
#> "042" "032" "031" "0413" "031" "02112" "02112" "022" "022"
#> HSPC_557 HSPC_564 HSPC_570 HSPC_576 HSPC_582 HSPC_588 HSPC_594 LT-HSC_150 HSPC_558
#> "032" "02112" "02112" "022" "022" "02121" "022" "022" "02112"
#> Prog_559 Prog_565 Prog_571 Prog_577 Prog_583 Prog_589 LT-HSC_151 Prog_553 Prog_560
#> "01222" "01213" "01223" "01212" "023" "023" "032" "043" "01211"
#> Prog_566 Prog_572 Prog_578 Prog_584 Prog_590 LT-HSC_152 Prog_554 Prog_561 Prog_567
#> "014" "032" "0413" "01211" "01221" "022" "031" "042" "01212"
#> Prog_573 Prog_579 Prog_585 Prog_591 LT-HSC_153 Prog_555 Prog_562 Prog_568 Prog_574
#> "023" "01223" "033" "023" "022" "031" "0112" "033" "01211"
#> Prog_580 Prog_586 Prog_592 LT-HSC_154 Prog_556 Prog_563 Prog_569 Prog_575 Prog_581
#> "031" "043" "01111" "02112" "033" "0213" "0131" "01113" "01222"
#> Prog_587 Prog_593 LT-HSC_155 Prog_557 Prog_564 Prog_570 Prog_576 Prog_582 Prog_588
#> "0132" "01222" "02111" "01222" "031" "0411" "014" "01223" "031"
#> Prog_594 LT-HSC_156 Prog_558 HSPC_601 HSPC_607 HSPC_613 HSPC_619 HSPC_625 HSPC_631
#> "033" "01222" "031" "042" "023" "042" "02112" "022" "0412"
#> LT-HSC_157 HSPC_595 HSPC_602 HSPC_608 HSPC_614 HSPC_620 HSPC_626 HSPC_632 LT-HSC_158
#> "023" "031" "022" "022" "042" "022" "023" "02112" "022"
#> HSPC_596 HSPC_603 HSPC_609 HSPC_615 HSPC_621 HSPC_627 HSPC_633 LT-HSC_159 HSPC_597
#> "042" "032" "023" "023" "02111" "042" "023" "0411" "042"
#> HSPC_604 HSPC_610 HSPC_616 HSPC_622 HSPC_628 HSPC_634 LT-HSC_160 HSPC_598 HSPC_605
#> "022" "022" "02111" "02111" "042" "042" "023" "042" "0213"
#> HSPC_611 HSPC_617 HSPC_623 HSPC_629 HSPC_635 LT-HSC_161 HSPC_599 HSPC_606 HSPC_612
#> "02112" "032" "042" "042" "042" "023" "022" "031" "031"
#> HSPC_618 HSPC_624 HSPC_630 HSPC_636 LT-HSC_162 HSPC_600 Prog_601 Prog_607 Prog_613
#> "022" "032" "022" "031" "023" "023" "02112" "01213" "033"
#> Prog_619 Prog_625 Prog_631 LT-HSC_163 Prog_595 Prog_602 Prog_608 Prog_614 Prog_620
#> "022" "0413" "032" "022" "022" "0132" "0112" "0132" "042"
#> Prog_626 Prog_632 LT-HSC_164 Prog_596 Prog_603 Prog_609 Prog_615 Prog_621 Prog_627
#> "01211" "01222" "031" "033" "0112" "01212" "0411" "01212" "031"
#> Prog_633 LT-HSC_165 Prog_597 Prog_604 Prog_610 Prog_616 Prog_622 Prog_628 Prog_634
#> "043" "022" "033" "033" "033" "01112" "01213" "01212" "043"
#> LT-HSC_166 Prog_598 Prog_605 Prog_611 Prog_617 Prog_623 Prog_629 Prog_635 LT-HSC_167
#> "042" "01212" "014" "033" "031" "0132" "01221" "033" "022"
#> Prog_599 Prog_606 Prog_612 Prog_618 Prog_624 Prog_630 Prog_636 LT-HSC_168 Prog_600
#> "01222" "031" "0131" "01222" "01222" "0131" "0213" "0131" "01222"
#> HSPC_643 HSPC_649 HSPC_655 HSPC_661 HSPC_667 HSPC_673 LT-HSC_169 HSPC_637 HSPC_644
#> "042" "032" "02121" "042" "022" "022" "023" "031" "0132"
#> HSPC_650 HSPC_656 HSPC_662 HSPC_668 HSPC_674 LT-HSC_170 HSPC_638 HSPC_645 HSPC_651
#> "02112" "022" "022" "032" "031" "042" "0132" "032" "0411"
#> HSPC_657 HSPC_663 HSPC_669 HSPC_675 LT-HSC_171 HSPC_639 HSPC_646 HSPC_652 HSPC_658
#> "023" "0412" "022" "02121" "042" "031" "031" "042" "0412"
#> HSPC_664 HSPC_670 HSPC_676 LT-HSC_172 HSPC_640 HSPC_647 HSPC_653 HSPC_659 HSPC_665
#> "032" "023" "022" "022" "031" "022" "02111" "02112" "042"
#> HSPC_671 HSPC_677 LT-HSC_173 HSPC_641 HSPC_648 HSPC_654 HSPC_660 HSPC_666 HSPC_672
#> "032" "023" "022" "031" "022" "042" "043" "0413" "032"
#> HSPC_678 LT-HSC_174 HSPC_642 Prog_643 Prog_649 Prog_655 Prog_661 Prog_667 Prog_673
#> "022" "031" "02112" "0412" "0112" "0112" "0131" "043" "042"
#> LT-HSC_175 Prog_637 Prog_644 Prog_650 Prog_656 Prog_662 Prog_668 Prog_674 LT-HSC_176
#> "02111" "014" "033" "01212" "033" "033" "023" "033" "022"
#> Prog_638 Prog_645 Prog_651 Prog_657 Prog_663 Prog_669 Prog_675 LT-HSC_177 Prog_639
#> "0112" "043" "031" "01112" "0112" "023" "01223" "022" "014"
#> Prog_646 Prog_652 Prog_658 Prog_664 Prog_670 Prog_676 LT-HSC_178 Prog_640 Prog_647
#> "01223" "01222" "01213" "023" "01211" "033" "02112" "01113" "043"
#> Prog_653 Prog_659 Prog_665 Prog_671 Prog_677 LT-HSC_179 Prog_641 Prog_648 Prog_654
#> "043" "033" "031" "031" "0112" "031" "023" "042" "0132"
#> Prog_660 Prog_666 Prog_672 Prog_678 LT-HSC_180 Prog_642 HSPC_685 HSPC_691 HSPC_697
#> "031" "033" "031" "0411" "043" "032" "0213" "02121" "0413"
#> HSPC_703 HSPC_709 HSPC_715 LT-HSC_181 HSPC_679 HSPC_686 HSPC_692 HSPC_698 HSPC_704
#> "022" "023" "02122" "02121" "031" "02112" "023" "022" "022"
#> HSPC_710 HSPC_716 LT-HSC_182 HSPC_680 HSPC_687 HSPC_693 HSPC_699 HSPC_705 HSPC_711
#> "02111" "022" "0213" "022" "023" "023" "022" "01213" "02111"
#> HSPC_717 LT-HSC_183 HSPC_681 HSPC_688 HSPC_694 HSPC_700 HSPC_706 HSPC_712 HSPC_718
#> "0412" "031" "042" "02111" "02111" "0413" "033" "02111" "02111"
#> LT-HSC_184 HSPC_682 HSPC_689 HSPC_695 HSPC_701 HSPC_707 HSPC_713 HSPC_719 LT-HSC_185
#> "031" "01213" "022" "0132" "042" "042" "02121" "022" "023"
#> HSPC_683 HSPC_690 HSPC_696 HSPC_702 HSPC_708 HSPC_714 HSPC_720 LT-HSC_186 HSPC_684
#> "0412" "022" "043" "022" "031" "022" "01213" "02111" "023"
#> Prog_685 Prog_691 Prog_697 Prog_703 Prog_709 Prog_715 LT-HSC_187 Prog_679 Prog_686
#> "01211" "0213" "0112" "043" "014" "01212" "031" "01223" "0413"
#> Prog_692 Prog_698 Prog_704 Prog_710 Prog_716 LT-HSC_188 Prog_680 Prog_687 Prog_693
#> "032" "0131" "031" "031" "033" "031" "01221" "01212" "01221"
#> Prog_699 Prog_705 Prog_711 Prog_717 LT-HSC_189 Prog_681 Prog_688 Prog_694 Prog_700
#> "01213" "01213" "033" "01212" "02111" "0131" "0112" "033" "01112"
#> Prog_706 Prog_712 Prog_718 LT-HSC_190 Prog_682 Prog_689 Prog_695 Prog_701 Prog_707
#> "0131" "0132" "01222" "023" "0132" "033" "01111" "01112" "033"
#> Prog_713 Prog_719 LT-HSC_191 Prog_683 Prog_690 Prog_696 Prog_702 Prog_708 Prog_714
#> "0131" "0112" "031" "023" "033" "0411" "014" "014" "014"
#> Prog_720 LT-HSC_192 Prog_684 HSPC_727 HSPC_733 HSPC_739 HSPC_745 HSPC_751 HSPC_757
#> "014" "01221" "032" "022" "022" "023" "023" "022" "022"
#> LT-HSC_193 HSPC_721 HSPC_728 HSPC_734 HSPC_740 HSPC_746 HSPC_752 HSPC_758 LT-HSC_194
#> "022" "023" "0213" "01213" "022" "023" "023" "032" "022"
#> HSPC_722 HSPC_729 HSPC_735 HSPC_741 HSPC_747 HSPC_753 HSPC_759 LT-HSC_195 HSPC_723
#> "031" "031" "042" "02112" "022" "031" "032" "032" "032"
#> HSPC_730 HSPC_736 HSPC_742 HSPC_748 HSPC_754 HSPC_760 LT-HSC_196 HSPC_724 HSPC_731
#> "031" "032" "032" "022" "0213" "042" "02111" "032" "0412"
#> HSPC_737 HSPC_743 HSPC_749 HSPC_755 HSPC_761 LT-HSC_197 HSPC_725 HSPC_732 HSPC_738
#> "01212" "031" "022" "031" "032" "022" "023" "032" "022"
#> HSPC_744 HSPC_750 HSPC_756 HSPC_762 LT-HSC_198 HSPC_726 Prog_727 Prog_733 Prog_739
#> "042" "031" "022" "042" "022" "0213" "01213" "033" "0412"
#> Prog_745 Prog_751 Prog_757 LT-HSC_199 Prog_721 Prog_728 Prog_734 Prog_740 Prog_746
#> "033" "033" "0412" "02112" "014" "032" "014" "033" "0411"
#> Prog_752 Prog_758 LT-HSC_200 Prog_722 Prog_729 Prog_735 Prog_741 Prog_747 Prog_753
#> "033" "033" "022" "014" "023" "01213" "0213" "033" "0131"
#> Prog_759 LT-HSC_201 Prog_723 Prog_730 Prog_736 Prog_742 Prog_748 Prog_754 Prog_760
#> "01212" "022" "0112" "0112" "0131" "0213" "0413" "0131" "01222"
#> LT-HSC_202 Prog_724 Prog_731 Prog_737 Prog_743 Prog_749 Prog_755 Prog_761 LT-HSC_203
#> "031" "033" "0112" "031" "01213" "043" "0213" "0412" "0213"
#> Prog_725 Prog_732 Prog_738 Prog_744 Prog_750 Prog_756 Prog_762 LT-HSC_204 Prog_726
#> "031" "043" "033" "033" "0413" "043" "031" "032" "031"
#> HSPC_769 HSPC_775 HSPC_781 HSPC_787 HSPC_793 HSPC_799 LT-HSC_205 HSPC_763 HSPC_770
#> "023" "023" "022" "023" "02121" "023" "023" "02121" "042"
#> HSPC_776 HSPC_782 HSPC_788 HSPC_794 HSPC_800 LT-HSC_206 HSPC_764 HSPC_771 HSPC_777
#> "023" "022" "023" "032" "0413" "022" "022" "032" "032"
#> HSPC_783 HSPC_789 HSPC_795 HSPC_801 LT-HSC_207 HSPC_765 HSPC_772 HSPC_778 HSPC_784
#> "022" "042" "032" "031" "042" "023" "042" "031" "031"
#> HSPC_790 HSPC_796 HSPC_802 LT-HSC_208 HSPC_766 HSPC_773 HSPC_779 HSPC_785 HSPC_791
#> "042" "01212" "022" "022" "01221" "032" "042" "031" "043"
#> HSPC_797 HSPC_803 LT-HSC_209 HSPC_767 HSPC_774 HSPC_780 HSPC_786 HSPC_792 HSPC_798
#> "032" "022" "02112" "01221" "032" "031" "031" "0213" "022"
#> HSPC_804 LT-HSC_210 HSPC_768 Prog_769 Prog_775 Prog_781 Prog_787 Prog_793 Prog_799
#> "022" "022" "023" "01223" "033" "01223" "043" "0132" "033"
#> LT-HSC_211 Prog_763 Prog_770 Prog_776 Prog_782 Prog_788 Prog_794 Prog_800 LT-HSC_212
#> "042" "01221" "014" "0112" "01221" "0112" "01222" "01223" "031"
#> Prog_764 Prog_771 Prog_777 Prog_783 Prog_789 Prog_795 Prog_801 LT-HSC_213 Prog_765
#> "01223" "014" "01211" "014" "01211" "01211" "0132" "022" "0131"
#> Prog_772 Prog_778 Prog_784 Prog_790 Prog_796 Prog_802 LT-HSC_214 Prog_766 Prog_773
#> "01223" "023" "032" "0112" "0412" "014" "031" "02122" "02122"
#> Prog_779 Prog_785 Prog_791 Prog_797 Prog_803 LT-HSC_215 Prog_767 Prog_774 Prog_780
#> "0131" "033" "01211" "031" "043" "032" "01113" "01212" "01113"
#> Prog_786 Prog_792 Prog_798 Prog_804 LT-HSC_216 Prog_768 HSPC_811 HSPC_817 HSPC_823
#> "01113" "0131" "0131" "01212" "0411" "01221" "02122" "02122" "02121"
#> HSPC_829 HSPC_835 HSPC_841 HSPC_847 HSPC_805 HSPC_812 HSPC_818 HSPC_824 HSPC_830
#> "0213" "032" "043" "023" "02122" "01221" "031" "031" "02121"
#> HSPC_836 HSPC_842 HSPC_848 HSPC_806 HSPC_813 HSPC_819 HSPC_825 HSPC_831 HSPC_837
#> "023" "023" "022" "023" "01221" "042" "031" "031" "0412"
#> HSPC_843 HSPC_849 HSPC_807 HSPC_814 HSPC_820 HSPC_826 HSPC_832 HSPC_838 HSPC_844
#> "031" "022" "01212" "0413" "01221" "031" "032" "032" "022"
#> HSPC_850 HSPC_808 HSPC_815 HSPC_821 HSPC_827 HSPC_833 HSPC_839 HSPC_845 HSPC_851
#> "02111" "01221" "032" "042" "022" "01221" "0413" "031" "023"
#> HSPC_809 HSPC_816 HSPC_822 HSPC_828 HSPC_834 HSPC_840 HSPC_846 HSPC_852 HSPC_810
#> "022" "042" "031" "032" "032" "022" "042" "022" "022"
#> Prog_811 Prog_817 Prog_823 Prog_829 Prog_835 Prog_841 Prog_847 Prog_805 Prog_812
#> "014" "0132" "031" "01212" "014" "0411" "01223" "042" "023"
#> Prog_818 Prog_824 Prog_830 Prog_836 Prog_842 Prog_848 Prog_806 Prog_813 Prog_819
#> "014" "01223" "0112" "0131" "014" "022" "033" "0112" "0112"
#> Prog_825 Prog_831 Prog_837 Prog_843 Prog_849 Prog_807 Prog_814 Prog_820 Prog_826
#> "01113" "014" "014" "0131" "042" "014" "0112" "0132" "0112"
#> Prog_832 Prog_838 Prog_844 Prog_850 Prog_808 Prog_815 Prog_821 Prog_827 Prog_833
#> "01211" "0112" "014" "014" "01212" "014" "01113" "033" "01221"
#> Prog_839 Prog_845 Prog_851 Prog_809 Prog_816 Prog_822 Prog_828 Prog_834 Prog_840
#> "0131" "0131" "033" "0132" "01223" "01113" "01113" "01212" "01212"
#> Prog_846 Prog_852 Prog_810
#> "01211" "0411" "0131"
get_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 1199))
#> HSPC_007 HSPC_013 HSPC_019 HSPC_025 HSPC_031 HSPC_037 LT-HSC_001 HSPC_001 HSPC_008
#> "0213" "023" "02112" "042" "032" "042" "023" "01221" "042"
#> HSPC_014 HSPC_020 HSPC_026 HSPC_032 HSPC_038 LT-HSC_002 HSPC_002 HSPC_009 HSPC_015
#> "022" "042" "0412" "02111" "022" "042" "022" "022" "023"
#> HSPC_021 HSPC_027 HSPC_033 HSPC_039 LT-HSC_003 HSPC_003 HSPC_010 HSPC_016 HSPC_022
#> "022" "033" "031" "02112" "023" "01213" "0213" "01221" "0412"
#> HSPC_028 HSPC_034 HSPC_040 LT-HSC_004 HSPC_004 HSPC_011 HSPC_017 HSPC_023 HSPC_029
#> "031" "01213" "032" "022" "031" "042" "022" "042" "02112"
#> HSPC_035 HSPC_041 LT-HSC_005 HSPC_005 HSPC_012 HSPC_018 HSPC_024 HSPC_030 HSPC_036
#> "022" "042" "02112" "02112" "042" "042" "022" "031" "01212"
#> HSPC_042 LT-HSC_006 HSPC_006 Prog_007 Prog_013 Prog_019 Prog_025 Prog_031 Prog_037
#> "032" "022" "0412" "01223" "01212" "0131" "0411" "033" "033"
#> LT-HSC_007 Prog_001 Prog_008 Prog_014 Prog_020 Prog_026 Prog_032 Prog_038 LT-HSC_008
#> "042" "043" "01112" "0112" "014" "033" "014" "014" "031"
#> Prog_002 Prog_009 Prog_015 Prog_021 Prog_027 Prog_033 Prog_039 LT-HSC_009 Prog_003
#> "01213" "01112" "01212" "014" "01222" "0112" "01112" "022" "01222"
#> Prog_010 Prog_016 Prog_022 Prog_028 Prog_034 Prog_040 LT-HSC_010 Prog_004 Prog_011
#> "0412" "0411" "0411" "0112" "02112" "042" "0412" "033" "014"
#> Prog_017 Prog_023 Prog_029 Prog_035 Prog_041 LT-HSC_011 Prog_005 Prog_012 Prog_018
#> "01211" "01222" "014" "01111" "0213" "0213" "0213" "022" "022"
#> Prog_024 Prog_030 Prog_036 Prog_042 LT-HSC_012 Prog_006 HSPC_049 HSPC_055 HSPC_061
#> "014" "0411" "0412" "0411" "0411" "01111" "031" "042" "042"
#> HSPC_067 HSPC_073 HSPC_079 LT-HSC_013 HSPC_043 HSPC_050 HSPC_056 HSPC_062 HSPC_068
#> "042" "022" "0412" "022" "042" "043" "022" "0413" "022"
#> HSPC_074 HSPC_080 LT-HSC_014 HSPC_044 HSPC_051 HSPC_057 HSPC_063 HSPC_069 HSPC_075
#> "022" "032" "022" "043" "032" "022" "0412" "032" "022"
#> HSPC_081 LT-HSC_015 HSPC_045 HSPC_052 HSPC_058 HSPC_064 HSPC_070 HSPC_076 HSPC_082
#> "032" "022" "042" "043" "031" "0413" "033" "032" "042"
#> LT-HSC_016 HSPC_046 HSPC_053 HSPC_059 HSPC_065 HSPC_071 HSPC_077 HSPC_083 LT-HSC_017
#> "022" "032" "01212" "02112" "032" "0413" "01212" "022" "022"
#> HSPC_047 HSPC_054 HSPC_060 HSPC_066 HSPC_072 HSPC_078 HSPC_084 LT-HSC_018 HSPC_048
#> "023" "031" "031" "031" "0413" "043" "042" "022" "032"
#> Prog_049 Prog_055 Prog_061 Prog_067 Prog_073 Prog_079 LT-HSC_019 Prog_043 Prog_050
#> "01112" "01211" "0112" "014" "032" "01112" "02112" "0132" "01211"
#> Prog_056 Prog_062 Prog_068 Prog_074 Prog_080 LT-HSC_020 Prog_044 Prog_051 Prog_057
#> "01222" "042" "032" "0411" "043" "031" "032" "014" "0131"
#> Prog_063 Prog_069 Prog_075 Prog_081 LT-HSC_021 Prog_045 Prog_052 Prog_058 Prog_064
#> "043" "01222" "01211" "01112" "0413" "0132" "043" "014" "014"
#> Prog_070 Prog_076 Prog_082 LT-HSC_022 Prog_046 Prog_053 Prog_059 Prog_065 Prog_071
#> "0412" "014" "01111" "022" "0112" "0112" "01222" "0131" "01223"
#> Prog_077 Prog_083 LT-HSC_023 Prog_047 Prog_054 Prog_060 Prog_066 Prog_072 Prog_078
#> "01222" "01212" "022" "01211" "0411" "0213" "014" "033" "014"
#> Prog_084 LT-HSC_024 Prog_048 HSPC_091 HSPC_097 HSPC_103 HSPC_109 HSPC_115 HSPC_121
#> "0112" "033" "032" "0212" "023" "022" "043" "022" "023"
#> LT-HSC_025 HSPC_085 HSPC_092 HSPC_098 HSPC_104 HSPC_110 HSPC_116 HSPC_122 LT-HSC_026
#> "0212" "042" "0212" "043" "023" "043" "02111" "031" "022"
#> HSPC_086 HSPC_093 HSPC_099 HSPC_105 HSPC_111 HSPC_117 HSPC_123 LT-HSC_027 HSPC_087
#> "02112" "02112" "042" "022" "022" "042" "022" "023" "022"
#> HSPC_094 HSPC_100 HSPC_106 HSPC_112 HSPC_118 HSPC_124 LT-HSC_028 HSPC_088 HSPC_095
#> "01221" "032" "022" "02111" "031" "02111" "032" "032" "022"
#> HSPC_101 HSPC_107 HSPC_113 HSPC_119 HSPC_125 LT-HSC_029 HSPC_089 HSPC_096 HSPC_102
#> "01213" "042" "023" "023" "031" "0212" "032" "043" "01211"
#> HSPC_108 HSPC_114 HSPC_120 HSPC_126 LT-HSC_030 HSPC_090 Prog_091 Prog_097 Prog_103
#> "031" "032" "031" "032" "0212" "01221" "01111" "01211" "01221"
#> Prog_109 Prog_115 Prog_121 LT-HSC_031 Prog_085 Prog_092 Prog_098 Prog_104 Prog_110
#> "0412" "014" "0213" "032" "01222" "033" "0112" "02111" "01112"
#> Prog_116 Prog_122 LT-HSC_032 Prog_086 Prog_093 Prog_099 Prog_105 Prog_111 Prog_117
#> "01221" "033" "01111" "0212" "01223" "01222" "01211" "014" "0132"
#> Prog_123 LT-HSC_033 Prog_087 Prog_094 Prog_100 Prog_106 Prog_112 Prog_118 Prog_124
#> "01211" "031" "01211" "014" "0112" "031" "01112" "0412" "033"
#> LT-HSC_034 Prog_088 Prog_095 Prog_101 Prog_107 Prog_113 Prog_119 Prog_125 LT-HSC_035
#> "031" "043" "0112" "0131" "01112" "01223" "01111" "031" "0212"
#> Prog_089 Prog_096 Prog_102 Prog_108 Prog_114 Prog_120 Prog_126 LT-HSC_036 Prog_090
#> "014" "032" "031" "0411" "0413" "023" "014" "033" "0112"
#> HSPC_133 HSPC_139 HSPC_145 HSPC_151 HSPC_157 HSPC_163 LT-HSC_037 HSPC_127 HSPC_134
#> "022" "022" "023" "042" "043" "023" "023" "0412" "023"
#> HSPC_140 HSPC_146 HSPC_152 HSPC_158 HSPC_164 LT-HSC_038 HSPC_128 HSPC_135 HSPC_141
#> "023" "0412" "022" "042" "022" "023" "023" "031" "022"
#> HSPC_147 HSPC_153 HSPC_159 HSPC_165 LT-HSC_039 HSPC_129 HSPC_136 HSPC_142 HSPC_148
#> "023" "022" "042" "043" "022" "02111" "042" "042" "043"
#> HSPC_154 HSPC_160 HSPC_166 LT-HSC_040 HSPC_130 HSPC_137 HSPC_143 HSPC_149 HSPC_155
#> "043" "02112" "042" "022" "042" "02111" "022" "022" "023"
#> HSPC_161 HSPC_167 LT-HSC_041 HSPC_131 HSPC_138 HSPC_144 HSPC_150 HSPC_156 HSPC_162
#> "042" "023" "022" "022" "01221" "031" "02111" "01221" "032"
#> HSPC_168 LT-HSC_042 HSPC_132 Prog_133 Prog_139 Prog_145 Prog_151 Prog_157 Prog_163
#> "0413" "022" "0132" "01211" "0112" "01213" "032" "01222" "01113"
#> LT-HSC_043 Prog_127 Prog_134 Prog_140 Prog_146 Prog_152 Prog_158 Prog_164 LT-HSC_044
#> "0132" "032" "043" "01111" "01113" "043" "01112" "0213" "043"
#> Prog_128 Prog_135 Prog_141 Prog_147 Prog_153 Prog_159 Prog_165 LT-HSC_045 Prog_129
#> "01211" "032" "0132" "02112" "01222" "0412" "043" "0412" "0131"
#> Prog_136 Prog_142 Prog_148 Prog_154 Prog_160 Prog_166 LT-HSC_046 Prog_130 Prog_137
#> "0132" "033" "023" "033" "022" "014" "031" "0131" "01222"
#> Prog_143 Prog_149 Prog_155 Prog_161 Prog_167 LT-HSC_047 Prog_131 Prog_138 Prog_144
#> "0131" "0413" "01211" "033" "01212" "0213" "033" "02111" "043"
#> Prog_150 Prog_156 Prog_162 Prog_168 LT-HSC_048 Prog_132 HSPC_175 HSPC_181 HSPC_187
#> "0131" "0212" "0412" "0131" "023" "0131" "042" "022" "022"
#> HSPC_193 HSPC_199 HSPC_205 LT-HSC_049 HSPC_169 HSPC_176 HSPC_182 HSPC_188 HSPC_194
#> "033" "031" "022" "022" "042" "022" "023" "02111" "02112"
#> HSPC_200 HSPC_206 LT-HSC_050 HSPC_170 HSPC_177 HSPC_183 HSPC_189 HSPC_195 HSPC_201
#> "022" "01223" "022" "023" "022" "033" "031" "01213" "02112"
#> HSPC_207 LT-HSC_051 HSPC_171 HSPC_178 HSPC_184 HSPC_190 HSPC_196 HSPC_202 HSPC_208
#> "032" "022" "022" "031" "0212" "0413" "042" "032" "022"
#> LT-HSC_052 HSPC_172 HSPC_179 HSPC_185 HSPC_191 HSPC_197 HSPC_203 HSPC_209 LT-HSC_053
#> "01221" "01221" "01221" "023" "022" "02112" "042" "02112" "02112"
#> HSPC_173 HSPC_180 HSPC_186 HSPC_192 HSPC_198 HSPC_204 HSPC_210 LT-HSC_054 HSPC_174
#> "023" "043" "033" "022" "031" "0412" "043" "022" "031"
#> Prog_175 Prog_181 Prog_187 Prog_193 Prog_199 Prog_205 LT-HSC_055 Prog_169 Prog_176
#> "0411" "02112" "033" "042" "032" "0413" "0132" "02112" "01221"
#> Prog_182 Prog_188 Prog_194 Prog_200 Prog_206 LT-HSC_056 Prog_170 Prog_177 Prog_183
#> "043" "014" "023" "043" "01222" "0131" "01112" "042" "0132"
#> Prog_189 Prog_195 Prog_201 Prog_207 LT-HSC_057 Prog_171 Prog_178 Prog_184 Prog_190
#> "01222" "042" "0412" "014" "031" "042" "0112" "0131" "01211"
#> Prog_196 Prog_202 Prog_208 LT-HSC_058 Prog_172 Prog_179 Prog_185 Prog_191 Prog_197
#> "01111" "0213" "033" "032" "014" "0131" "01111" "033" "0131"
#> Prog_203 Prog_209 LT-HSC_059 Prog_173 Prog_180 Prog_186 Prog_192 Prog_198 Prog_204
#> "0132" "0131" "0212" "043" "032" "01223" "01211" "02112" "023"
#> Prog_210 LT-HSC_060 Prog_174 HSPC_217 HSPC_223 HSPC_229 HSPC_235 HSPC_241 HSPC_247
#> "032" "0131" "0213" "0212" "022" "023" "022" "02112" "023"
#> LT-HSC_061 HSPC_211 HSPC_218 HSPC_224 HSPC_230 HSPC_236 HSPC_242 HSPC_248 LT-HSC_062
#> "0212" "042" "022" "022" "042" "043" "023" "022" "023"
#> HSPC_212 HSPC_219 HSPC_225 HSPC_231 HSPC_237 HSPC_243 HSPC_249 LT-HSC_063 HSPC_213
#> "023" "042" "022" "023" "022" "0412" "022" "033" "0413"
#> HSPC_220 HSPC_226 HSPC_232 HSPC_238 HSPC_244 HSPC_250 LT-HSC_064 HSPC_214 HSPC_221
#> "022" "02112" "023" "0212" "032" "0413" "0112" "01213" "031"
#> HSPC_227 HSPC_233 HSPC_239 HSPC_245 HSPC_251 LT-HSC_065 HSPC_215 HSPC_222 HSPC_228
#> "022" "042" "022" "022" "0413" "031" "0412" "042" "023"
#> HSPC_234 HSPC_240 HSPC_246 HSPC_252 LT-HSC_066 HSPC_216 Prog_217 Prog_223 Prog_229
#> "02112" "031" "022" "0213" "031" "01213" "01111" "042" "01112"
#> Prog_235 Prog_241 Prog_247 LT-HSC_067 Prog_211 Prog_218 Prog_224 Prog_230 Prog_236
#> "023" "022" "033" "0213" "0112" "01222" "0132" "0413" "01213"
#> Prog_242 Prog_248 LT-HSC_068 Prog_212 Prog_219 Prog_225 Prog_231 Prog_237 Prog_243
#> "014" "043" "01221" "014" "0213" "033" "0132" "042" "0131"
#> Prog_249 LT-HSC_069 Prog_213 Prog_220 Prog_226 Prog_232 Prog_238 Prog_244 Prog_250
#> "01111" "032" "043" "0213" "031" "033" "01211" "032" "014"
#> LT-HSC_070 Prog_214 Prog_221 Prog_227 Prog_233 Prog_239 Prog_245 Prog_251 LT-HSC_071
#> "043" "0413" "01111" "0132" "01222" "01111" "01211" "0212" "032"
#> Prog_215 Prog_222 Prog_228 Prog_234 Prog_240 Prog_246 Prog_252 LT-HSC_072 Prog_216
#> "01113" "032" "0131" "01212" "01221" "033" "032" "01211" "01113"
#> HSPC_259 HSPC_265 HSPC_271 HSPC_277 HSPC_283 HSPC_289 LT-HSC_073 HSPC_253 HSPC_260
#> "023" "022" "0412" "023" "022" "022" "023" "0413" "02112"
#> HSPC_266 HSPC_272 HSPC_278 HSPC_284 HSPC_290 LT-HSC_074 HSPC_254 HSPC_261 HSPC_267
#> "022" "02112" "042" "02112" "0413" "022" "022" "0132" "031"
#> HSPC_273 HSPC_279 HSPC_285 HSPC_291 LT-HSC_075 HSPC_255 HSPC_262 HSPC_268 HSPC_274
#> "02112" "043" "01213" "033" "031" "032" "0212" "01212" "022"
#> HSPC_280 HSPC_286 HSPC_292 LT-HSC_076 HSPC_256 HSPC_263 HSPC_269 HSPC_275 HSPC_281
#> "0412" "042" "0412" "042" "0112" "0412" "0132" "0131" "023"
#> HSPC_287 HSPC_293 LT-HSC_077 HSPC_257 HSPC_264 HSPC_270 HSPC_276 HSPC_282 HSPC_288
#> "0413" "0412" "023" "0413" "022" "032" "032" "01212" "01212"
#> HSPC_294 LT-HSC_078 HSPC_258 Prog_259 Prog_265 Prog_271 Prog_277 Prog_283 Prog_289
#> "0413" "022" "01222" "031" "0112" "033" "031" "042" "0412"
#> LT-HSC_079 Prog_253 Prog_260 Prog_266 Prog_272 Prog_278 Prog_284 Prog_290 LT-HSC_080
#> "02112" "014" "01223" "01221" "01223" "0112" "014" "0112" "032"
#> Prog_254 Prog_261 Prog_267 Prog_273 Prog_279 Prog_285 Prog_291 LT-HSC_081 Prog_255
#> "0112" "014" "0131" "0131" "01112" "014" "0411" "01221" "01211"
#> Prog_262 Prog_268 Prog_274 Prog_280 Prog_286 Prog_292 LT-HSC_082 Prog_256 Prog_263
#> "01223" "01223" "014" "033" "0112" "01222" "032" "042" "0131"
#> Prog_269 Prog_275 Prog_281 Prog_287 Prog_293 LT-HSC_083 Prog_257 Prog_264 Prog_270
#> "0112" "01223" "014" "0131" "033" "0212" "0213" "023" "0131"
#> Prog_276 Prog_282 Prog_288 Prog_294 LT-HSC_084 Prog_258 HSPC_301 HSPC_307 HSPC_313
#> "01212" "01113" "0112" "01222" "033" "0132" "023" "022" "042"
#> HSPC_319 HSPC_325 HSPC_331 LT-HSC_085 HSPC_295 HSPC_302 HSPC_308 HSPC_314 HSPC_320
#> "0212" "022" "022" "022" "0413" "023" "043" "042" "043"
#> HSPC_326 HSPC_332 LT-HSC_086 HSPC_296 HSPC_303 HSPC_309 HSPC_315 HSPC_321 HSPC_327
#> "022" "01211" "042" "022" "01221" "022" "022" "042" "01212"
#> HSPC_333 LT-HSC_087 HSPC_297 HSPC_304 HSPC_310 HSPC_316 HSPC_322 HSPC_328 HSPC_334
#> "01213" "0212" "022" "032" "022" "023" "031" "042" "022"
#> LT-HSC_088 HSPC_298 HSPC_305 HSPC_311 HSPC_317 HSPC_323 HSPC_329 HSPC_335 LT-HSC_089
#> "043" "032" "0412" "0212" "023" "031" "042" "022" "022"
#> HSPC_299 HSPC_306 HSPC_312 HSPC_318 HSPC_324 HSPC_330 HSPC_336 LT-HSC_090 HSPC_300
#> "033" "033" "0413" "022" "031" "031" "022" "032" "01221"
#> Prog_301 Prog_307 Prog_313 Prog_319 Prog_325 Prog_331 LT-HSC_091 Prog_295 Prog_302
#> "0411" "0412" "0413" "0132" "01211" "01212" "01111" "0412" "0212"
#> Prog_308 Prog_314 Prog_320 Prog_326 Prog_332 LT-HSC_092 Prog_296 Prog_303 Prog_309
#> "01223" "033" "01221" "01111" "01222" "0212" "01222" "022" "022"
#> Prog_315 Prog_321 Prog_327 Prog_333 LT-HSC_093 Prog_297 Prog_304 Prog_310 Prog_316
#> "0411" "0411" "01211" "043" "042" "043" "01211" "0412" "0411"
#> Prog_322 Prog_328 Prog_334 LT-HSC_094 Prog_298 Prog_305 Prog_311 Prog_317 Prog_323
#> "043" "0411" "014" "042" "014" "0413" "043" "0212" "0411"
#> Prog_329 Prog_335 LT-HSC_095 Prog_299 Prog_306 Prog_312 Prog_318 Prog_324 Prog_330
#> "0411" "0413" "01112" "0112" "022" "01111" "01111" "0112" "0132"
#> Prog_336 LT-HSC_096 Prog_300 HSPC_343 HSPC_349 HSPC_355 HSPC_361 HSPC_367 HSPC_373
#> "0132" "01212" "0131" "0132" "031" "0213" "023" "022" "023"
#> LT-HSC_097 HSPC_337 HSPC_344 HSPC_350 HSPC_356 HSPC_362 HSPC_368 HSPC_374 LT-HSC_098
#> "0212" "022" "0412" "022" "043" "0411" "042" "032" "0112"
#> HSPC_338 HSPC_345 HSPC_351 HSPC_357 HSPC_363 HSPC_369 HSPC_375 LT-HSC_099 HSPC_339
#> "01112" "043" "043" "02111" "022" "02111" "02111" "023" "032"
#> HSPC_346 HSPC_352 HSPC_358 HSPC_364 HSPC_370 HSPC_376 LT-HSC_100 HSPC_340 HSPC_347
#> "01213" "0412" "042" "042" "0131" "042" "01112" "0213" "02112"
#> HSPC_353 HSPC_359 HSPC_365 HSPC_371 HSPC_377 LT-HSC_101 HSPC_341 HSPC_348 HSPC_354
#> "01212" "032" "023" "01212" "0413" "0411" "01221" "033" "022"
#> HSPC_360 HSPC_366 HSPC_372 HSPC_378 LT-HSC_102 HSPC_342 Prog_343 Prog_349 Prog_355
#> "042" "0213" "042" "0212" "01112" "0131" "0132" "0411" "0413"
#> Prog_361 Prog_367 Prog_373 LT-HSC_103 Prog_337 Prog_344 Prog_350 Prog_356 Prog_362
#> "014" "0131" "01113" "0132" "01111" "02112" "014" "0112" "0412"
#> Prog_368 Prog_374 LT-HSC_104 Prog_338 Prog_345 Prog_351 Prog_357 Prog_363 Prog_369
#> "014" "014" "0212" "01221" "0411" "014" "01112" "014" "0411"
#> Prog_375 LT-HSC_105 Prog_339 Prog_346 Prog_352 Prog_358 Prog_364 Prog_370 Prog_376
#> "01112" "0411" "0112" "014" "01112" "031" "0112" "0411" "0112"
#> LT-HSC_106 Prog_340 Prog_347 Prog_353 Prog_359 Prog_365 Prog_371 Prog_377 LT-HSC_107
#> "0412" "014" "0213" "0132" "0112" "0213" "01212" "01111" "023"
#> Prog_341 Prog_348 Prog_354 Prog_360 Prog_366 Prog_372 Prog_378 LT-HSC_108 Prog_342
#> "01212" "0212" "0412" "01112" "014" "0112" "032" "01211" "01112"
#> HSPC_385 HSPC_391 HSPC_397 HSPC_403 HSPC_409 HSPC_415 HSPC_421 HSPC_379 HSPC_386
#> "02111" "031" "02111" "042" "023" "023" "043" "0212" "042"
#> HSPC_392 HSPC_398 HSPC_404 HSPC_410 HSPC_416 HSPC_422 HSPC_380 HSPC_387 HSPC_393
#> "032" "032" "0112" "01212" "031" "032" "032" "0412" "0411"
#> HSPC_399 HSPC_405 HSPC_411 HSPC_417 HSPC_423 HSPC_381 HSPC_388 HSPC_394 HSPC_400
#> "031" "032" "01212" "01221" "01221" "02112" "01221" "02111" "0412"
#> HSPC_406 HSPC_412 HSPC_418 HSPC_424 HSPC_382 HSPC_389 HSPC_395 HSPC_401 HSPC_407
#> "042" "0131" "031" "0413" "01221" "014" "043" "02111" "0131"
#> HSPC_413 HSPC_419 HSPC_425 HSPC_383 HSPC_390 HSPC_396 HSPC_402 HSPC_408 HSPC_414
#> "042" "0131" "0413" "022" "042" "032" "032" "01111" "02112"
#> HSPC_420 HSPC_426 HSPC_384 Prog_385 Prog_391 Prog_397 Prog_403 Prog_409 Prog_415
#> "01221" "042" "02112" "01111" "0213" "01112" "0112" "01112" "01112"
#> Prog_421 Prog_379 Prog_386 Prog_392 Prog_398 Prog_404 Prog_410 Prog_416 Prog_422
#> "01112" "0112" "01112" "01222" "01112" "01113" "0112" "0112" "0413"
#> Prog_380 Prog_387 Prog_393 Prog_399 Prog_405 Prog_411 Prog_417 Prog_423 Prog_381
#> "0112" "0131" "0112" "01223" "01223" "042" "0411" "0412" "0112"
#> Prog_388 Prog_394 Prog_400 Prog_406 Prog_412 Prog_418 Prog_424 Prog_382 Prog_389
#> "01112" "033" "02111" "0112" "01213" "014" "0112" "031" "0132"
#> Prog_395 Prog_401 Prog_407 Prog_413 Prog_419 Prog_425 Prog_383 Prog_390 Prog_396
#> "01112" "0132" "033" "01212" "01112" "014" "01111" "043" "014"
#> Prog_402 Prog_408 Prog_414 Prog_420 Prog_426 Prog_384 HSPC_433 HSPC_439 HSPC_445
#> "0412" "014" "0131" "01212" "01211" "0411" "0212" "0212" "0212"
#> HSPC_451 HSPC_457 HSPC_463 LT-HSC_109 HSPC_427 HSPC_434 HSPC_440 HSPC_446 HSPC_452
#> "023" "022" "032" "022" "023" "0213" "042" "022" "02111"
#> HSPC_458 HSPC_464 LT-HSC_110 HSPC_428 HSPC_435 HSPC_441 HSPC_447 HSPC_453 HSPC_459
#> "02112" "02112" "031" "0212" "031" "031" "033" "032" "031"
#> HSPC_465 LT-HSC_111 HSPC_429 HSPC_436 HSPC_442 HSPC_448 HSPC_454 HSPC_460 HSPC_466
#> "031" "022" "02111" "0132" "01221" "031" "0132" "031" "042"
#> LT-HSC_112 HSPC_430 HSPC_437 HSPC_443 HSPC_449 HSPC_455 HSPC_461 HSPC_467 LT-HSC_113
#> "032" "031" "02112" "031" "031" "022" "042" "031" "032"
#> HSPC_431 HSPC_438 HSPC_444 HSPC_450 HSPC_456 HSPC_462 HSPC_468 LT-HSC_114 HSPC_432
#> "031" "0213" "022" "022" "01221" "031" "031" "023" "022"
#> Prog_433 Prog_439 Prog_445 Prog_451 Prog_457 Prog_463 LT-HSC_115 Prog_427 Prog_434
#> "031" "033" "032" "0131" "014" "033" "01221" "022" "01111"
#> Prog_440 Prog_446 Prog_452 Prog_458 Prog_464 LT-HSC_116 Prog_428 Prog_435 Prog_441
#> "043" "032" "0212" "043" "032" "031" "01221" "0411" "01211"
#> Prog_447 Prog_453 Prog_459 Prog_465 LT-HSC_117 Prog_429 Prog_436 Prog_442 Prog_448
#> "01223" "014" "033" "043" "031" "01111" "01221" "02112" "033"
#> Prog_454 Prog_460 Prog_466 LT-HSC_118 Prog_430 Prog_437 Prog_443 Prog_449 Prog_455
#> "0412" "042" "0411" "02112" "0112" "0132" "0131" "01111" "031"
#> Prog_461 Prog_467 LT-HSC_119 Prog_431 Prog_438 Prog_444 Prog_450 Prog_456 Prog_462
#> "022" "033" "0213" "033" "022" "01111" "01222" "01223" "042"
#> Prog_468 LT-HSC_120 Prog_432 HSPC_475 HSPC_481 HSPC_487 HSPC_493 HSPC_499 HSPC_505
#> "0411" "0413" "043" "022" "023" "0212" "022" "022" "042"
#> LT-HSC_121 HSPC_469 HSPC_476 HSPC_482 HSPC_488 HSPC_494 HSPC_500 HSPC_506 LT-HSC_122
#> "0213" "023" "02111" "022" "022" "022" "022" "022" "042"
#> HSPC_470 HSPC_477 HSPC_483 HSPC_489 HSPC_495 HSPC_501 HSPC_507 LT-HSC_123 HSPC_471
#> "022" "01221" "022" "042" "043" "023" "022" "022" "022"
#> HSPC_478 HSPC_484 HSPC_490 HSPC_496 HSPC_502 HSPC_508 LT-HSC_124 HSPC_472 HSPC_479
#> "022" "02112" "031" "031" "032" "0131" "031" "032" "031"
#> HSPC_485 HSPC_491 HSPC_497 HSPC_503 HSPC_509 LT-HSC_125 HSPC_473 HSPC_480 HSPC_486
#> "01212" "0412" "022" "01212" "042" "031" "031" "032" "042"
#> HSPC_492 HSPC_498 HSPC_504 HSPC_510 LT-HSC_126 HSPC_474 Prog_475 Prog_481 Prog_487
#> "032" "031" "022" "0412" "032" "032" "0131" "033" "0131"
#> Prog_493 Prog_499 Prog_505 LT-HSC_127 Prog_469 Prog_476 Prog_482 Prog_488 Prog_494
#> "01222" "01212" "0131" "0212" "042" "01213" "01222" "0131" "043"
#> Prog_500 Prog_506 LT-HSC_128 Prog_470 Prog_477 Prog_483 Prog_489 Prog_495 Prog_501
#> "0131" "01211" "031" "01213" "0112" "043" "01211" "032" "01223"
#> Prog_507 LT-HSC_129 Prog_471 Prog_478 Prog_484 Prog_490 Prog_496 Prog_502 Prog_508
#> "0411" "02112" "01222" "01113" "01223" "043" "033" "0112" "01113"
#> LT-HSC_130 Prog_472 Prog_479 Prog_485 Prog_491 Prog_497 Prog_503 Prog_509 LT-HSC_131
#> "0132" "043" "01222" "0132" "0131" "0411" "043" "031" "031"
#> Prog_473 Prog_480 Prog_486 Prog_492 Prog_498 Prog_504 Prog_510 LT-HSC_132 Prog_474
#> "01223" "023" "01211" "031" "0213" "01213" "042" "014" "032"
#> HSPC_517 HSPC_523 HSPC_529 HSPC_535 HSPC_541 HSPC_547 LT-HSC_133 HSPC_511 HSPC_518
#> "023" "032" "02111" "022" "022" "032" "0212" "023" "022"
#> HSPC_524 HSPC_530 HSPC_536 HSPC_542 HSPC_548 LT-HSC_134 HSPC_512 HSPC_519 HSPC_525
#> "022" "022" "02111" "02111" "022" "023" "032" "02112" "023"
#> HSPC_531 HSPC_537 HSPC_543 HSPC_549 LT-HSC_135 HSPC_513 HSPC_520 HSPC_526 HSPC_532
#> "022" "042" "042" "022" "022" "0212" "042" "031" "042"
#> HSPC_538 HSPC_544 HSPC_550 LT-HSC_136 HSPC_514 HSPC_521 HSPC_527 HSPC_533 HSPC_539
#> "031" "01213" "042" "023" "031" "022" "01221" "032" "022"
#> HSPC_545 HSPC_551 LT-HSC_137 HSPC_515 HSPC_522 HSPC_528 HSPC_534 HSPC_540 HSPC_546
#> "022" "042" "022" "031" "022" "0413" "031" "032" "022"
#> HSPC_552 LT-HSC_138 HSPC_516 Prog_517 Prog_523 Prog_529 Prog_535 Prog_541 Prog_547
#> "042" "022" "032" "033" "0112" "0131" "0112" "0131" "0132"
#> LT-HSC_139 Prog_511 Prog_518 Prog_524 Prog_530 Prog_536 Prog_542 Prog_548 LT-HSC_140
#> "031" "031" "0413" "042" "01213" "0112" "0413" "0112" "022"
#> Prog_512 Prog_519 Prog_525 Prog_531 Prog_537 Prog_543 Prog_549 LT-HSC_141 Prog_513
#> "0411" "042" "043" "0131" "022" "014" "0413" "02111" "033"
#> Prog_520 Prog_526 Prog_532 Prog_538 Prog_544 Prog_550 LT-HSC_142 Prog_514 Prog_521
#> "0131" "023" "022" "0212" "023" "01213" "01213" "01223" "01213"
#> Prog_527 Prog_533 Prog_539 Prog_545 Prog_551 LT-HSC_143 Prog_515 Prog_522 Prog_528
#> "01213" "022" "0411" "014" "01212" "0132" "043" "022" "014"
#> Prog_534 Prog_540 Prog_546 Prog_552 LT-HSC_144 Prog_516 HSPC_559 HSPC_565 HSPC_571
#> "043" "023" "023" "0412" "042" "01111" "022" "023" "031"
#> HSPC_577 HSPC_583 HSPC_589 LT-HSC_145 HSPC_553 HSPC_560 HSPC_566 HSPC_572 HSPC_578
#> "022" "02111" "022" "022" "0131" "022" "022" "023" "022"
#> HSPC_584 HSPC_590 LT-HSC_146 HSPC_554 HSPC_561 HSPC_567 HSPC_573 HSPC_579 HSPC_585
#> "022" "042" "031" "022" "02111" "031" "022" "031" "022"
#> HSPC_591 LT-HSC_147 HSPC_555 HSPC_562 HSPC_568 HSPC_574 HSPC_580 HSPC_586 HSPC_592
#> "023" "022" "022" "023" "022" "01213" "032" "032" "031"
#> LT-HSC_148 HSPC_556 HSPC_563 HSPC_569 HSPC_575 HSPC_581 HSPC_587 HSPC_593 LT-HSC_149
#> "042" "032" "031" "0413" "031" "02112" "02112" "022" "022"
#> HSPC_557 HSPC_564 HSPC_570 HSPC_576 HSPC_582 HSPC_588 HSPC_594 LT-HSC_150 HSPC_558
#> "032" "02112" "02112" "022" "022" "0212" "022" "022" "02112"
#> Prog_559 Prog_565 Prog_571 Prog_577 Prog_583 Prog_589 LT-HSC_151 Prog_553 Prog_560
#> "01222" "01213" "01223" "01212" "023" "023" "032" "043" "01211"
#> Prog_566 Prog_572 Prog_578 Prog_584 Prog_590 LT-HSC_152 Prog_554 Prog_561 Prog_567
#> "014" "032" "0413" "01211" "01221" "022" "031" "042" "01212"
#> Prog_573 Prog_579 Prog_585 Prog_591 LT-HSC_153 Prog_555 Prog_562 Prog_568 Prog_574
#> "023" "01223" "033" "023" "022" "031" "0112" "033" "01211"
#> Prog_580 Prog_586 Prog_592 LT-HSC_154 Prog_556 Prog_563 Prog_569 Prog_575 Prog_581
#> "031" "043" "01111" "02112" "033" "0213" "0131" "01113" "01222"
#> Prog_587 Prog_593 LT-HSC_155 Prog_557 Prog_564 Prog_570 Prog_576 Prog_582 Prog_588
#> "0132" "01222" "02111" "01222" "031" "0411" "014" "01223" "031"
#> Prog_594 LT-HSC_156 Prog_558 HSPC_601 HSPC_607 HSPC_613 HSPC_619 HSPC_625 HSPC_631
#> "033" "01222" "031" "042" "023" "042" "02112" "022" "0412"
#> LT-HSC_157 HSPC_595 HSPC_602 HSPC_608 HSPC_614 HSPC_620 HSPC_626 HSPC_632 LT-HSC_158
#> "023" "031" "022" "022" "042" "022" "023" "02112" "022"
#> HSPC_596 HSPC_603 HSPC_609 HSPC_615 HSPC_621 HSPC_627 HSPC_633 LT-HSC_159 HSPC_597
#> "042" "032" "023" "023" "02111" "042" "023" "0411" "042"
#> HSPC_604 HSPC_610 HSPC_616 HSPC_622 HSPC_628 HSPC_634 LT-HSC_160 HSPC_598 HSPC_605
#> "022" "022" "02111" "02111" "042" "042" "023" "042" "0213"
#> HSPC_611 HSPC_617 HSPC_623 HSPC_629 HSPC_635 LT-HSC_161 HSPC_599 HSPC_606 HSPC_612
#> "02112" "032" "042" "042" "042" "023" "022" "031" "031"
#> HSPC_618 HSPC_624 HSPC_630 HSPC_636 LT-HSC_162 HSPC_600 Prog_601 Prog_607 Prog_613
#> "022" "032" "022" "031" "023" "023" "02112" "01213" "033"
#> Prog_619 Prog_625 Prog_631 LT-HSC_163 Prog_595 Prog_602 Prog_608 Prog_614 Prog_620
#> "022" "0413" "032" "022" "022" "0132" "0112" "0132" "042"
#> Prog_626 Prog_632 LT-HSC_164 Prog_596 Prog_603 Prog_609 Prog_615 Prog_621 Prog_627
#> "01211" "01222" "031" "033" "0112" "01212" "0411" "01212" "031"
#> Prog_633 LT-HSC_165 Prog_597 Prog_604 Prog_610 Prog_616 Prog_622 Prog_628 Prog_634
#> "043" "022" "033" "033" "033" "01112" "01213" "01212" "043"
#> LT-HSC_166 Prog_598 Prog_605 Prog_611 Prog_617 Prog_623 Prog_629 Prog_635 LT-HSC_167
#> "042" "01212" "014" "033" "031" "0132" "01221" "033" "022"
#> Prog_599 Prog_606 Prog_612 Prog_618 Prog_624 Prog_630 Prog_636 LT-HSC_168 Prog_600
#> "01222" "031" "0131" "01222" "01222" "0131" "0213" "0131" "01222"
#> HSPC_643 HSPC_649 HSPC_655 HSPC_661 HSPC_667 HSPC_673 LT-HSC_169 HSPC_637 HSPC_644
#> "042" "032" "0212" "042" "022" "022" "023" "031" "0132"
#> HSPC_650 HSPC_656 HSPC_662 HSPC_668 HSPC_674 LT-HSC_170 HSPC_638 HSPC_645 HSPC_651
#> "02112" "022" "022" "032" "031" "042" "0132" "032" "0411"
#> HSPC_657 HSPC_663 HSPC_669 HSPC_675 LT-HSC_171 HSPC_639 HSPC_646 HSPC_652 HSPC_658
#> "023" "0412" "022" "0212" "042" "031" "031" "042" "0412"
#> HSPC_664 HSPC_670 HSPC_676 LT-HSC_172 HSPC_640 HSPC_647 HSPC_653 HSPC_659 HSPC_665
#> "032" "023" "022" "022" "031" "022" "02111" "02112" "042"
#> HSPC_671 HSPC_677 LT-HSC_173 HSPC_641 HSPC_648 HSPC_654 HSPC_660 HSPC_666 HSPC_672
#> "032" "023" "022" "031" "022" "042" "043" "0413" "032"
#> HSPC_678 LT-HSC_174 HSPC_642 Prog_643 Prog_649 Prog_655 Prog_661 Prog_667 Prog_673
#> "022" "031" "02112" "0412" "0112" "0112" "0131" "043" "042"
#> LT-HSC_175 Prog_637 Prog_644 Prog_650 Prog_656 Prog_662 Prog_668 Prog_674 LT-HSC_176
#> "02111" "014" "033" "01212" "033" "033" "023" "033" "022"
#> Prog_638 Prog_645 Prog_651 Prog_657 Prog_663 Prog_669 Prog_675 LT-HSC_177 Prog_639
#> "0112" "043" "031" "01112" "0112" "023" "01223" "022" "014"
#> Prog_646 Prog_652 Prog_658 Prog_664 Prog_670 Prog_676 LT-HSC_178 Prog_640 Prog_647
#> "01223" "01222" "01213" "023" "01211" "033" "02112" "01113" "043"
#> Prog_653 Prog_659 Prog_665 Prog_671 Prog_677 LT-HSC_179 Prog_641 Prog_648 Prog_654
#> "043" "033" "031" "031" "0112" "031" "023" "042" "0132"
#> Prog_660 Prog_666 Prog_672 Prog_678 LT-HSC_180 Prog_642 HSPC_685 HSPC_691 HSPC_697
#> "031" "033" "031" "0411" "043" "032" "0213" "0212" "0413"
#> HSPC_703 HSPC_709 HSPC_715 LT-HSC_181 HSPC_679 HSPC_686 HSPC_692 HSPC_698 HSPC_704
#> "022" "023" "0212" "0212" "031" "02112" "023" "022" "022"
#> HSPC_710 HSPC_716 LT-HSC_182 HSPC_680 HSPC_687 HSPC_693 HSPC_699 HSPC_705 HSPC_711
#> "02111" "022" "0213" "022" "023" "023" "022" "01213" "02111"
#> HSPC_717 LT-HSC_183 HSPC_681 HSPC_688 HSPC_694 HSPC_700 HSPC_706 HSPC_712 HSPC_718
#> "0412" "031" "042" "02111" "02111" "0413" "033" "02111" "02111"
#> LT-HSC_184 HSPC_682 HSPC_689 HSPC_695 HSPC_701 HSPC_707 HSPC_713 HSPC_719 LT-HSC_185
#> "031" "01213" "022" "0132" "042" "042" "0212" "022" "023"
#> HSPC_683 HSPC_690 HSPC_696 HSPC_702 HSPC_708 HSPC_714 HSPC_720 LT-HSC_186 HSPC_684
#> "0412" "022" "043" "022" "031" "022" "01213" "02111" "023"
#> Prog_685 Prog_691 Prog_697 Prog_703 Prog_709 Prog_715 LT-HSC_187 Prog_679 Prog_686
#> "01211" "0213" "0112" "043" "014" "01212" "031" "01223" "0413"
#> Prog_692 Prog_698 Prog_704 Prog_710 Prog_716 LT-HSC_188 Prog_680 Prog_687 Prog_693
#> "032" "0131" "031" "031" "033" "031" "01221" "01212" "01221"
#> Prog_699 Prog_705 Prog_711 Prog_717 LT-HSC_189 Prog_681 Prog_688 Prog_694 Prog_700
#> "01213" "01213" "033" "01212" "02111" "0131" "0112" "033" "01112"
#> Prog_706 Prog_712 Prog_718 LT-HSC_190 Prog_682 Prog_689 Prog_695 Prog_701 Prog_707
#> "0131" "0132" "01222" "023" "0132" "033" "01111" "01112" "033"
#> Prog_713 Prog_719 LT-HSC_191 Prog_683 Prog_690 Prog_696 Prog_702 Prog_708 Prog_714
#> "0131" "0112" "031" "023" "033" "0411" "014" "014" "014"
#> Prog_720 LT-HSC_192 Prog_684 HSPC_727 HSPC_733 HSPC_739 HSPC_745 HSPC_751 HSPC_757
#> "014" "01221" "032" "022" "022" "023" "023" "022" "022"
#> LT-HSC_193 HSPC_721 HSPC_728 HSPC_734 HSPC_740 HSPC_746 HSPC_752 HSPC_758 LT-HSC_194
#> "022" "023" "0213" "01213" "022" "023" "023" "032" "022"
#> HSPC_722 HSPC_729 HSPC_735 HSPC_741 HSPC_747 HSPC_753 HSPC_759 LT-HSC_195 HSPC_723
#> "031" "031" "042" "02112" "022" "031" "032" "032" "032"
#> HSPC_730 HSPC_736 HSPC_742 HSPC_748 HSPC_754 HSPC_760 LT-HSC_196 HSPC_724 HSPC_731
#> "031" "032" "032" "022" "0213" "042" "02111" "032" "0412"
#> HSPC_737 HSPC_743 HSPC_749 HSPC_755 HSPC_761 LT-HSC_197 HSPC_725 HSPC_732 HSPC_738
#> "01212" "031" "022" "031" "032" "022" "023" "032" "022"
#> HSPC_744 HSPC_750 HSPC_756 HSPC_762 LT-HSC_198 HSPC_726 Prog_727 Prog_733 Prog_739
#> "042" "031" "022" "042" "022" "0213" "01213" "033" "0412"
#> Prog_745 Prog_751 Prog_757 LT-HSC_199 Prog_721 Prog_728 Prog_734 Prog_740 Prog_746
#> "033" "033" "0412" "02112" "014" "032" "014" "033" "0411"
#> Prog_752 Prog_758 LT-HSC_200 Prog_722 Prog_729 Prog_735 Prog_741 Prog_747 Prog_753
#> "033" "033" "022" "014" "023" "01213" "0213" "033" "0131"
#> Prog_759 LT-HSC_201 Prog_723 Prog_730 Prog_736 Prog_742 Prog_748 Prog_754 Prog_760
#> "01212" "022" "0112" "0112" "0131" "0213" "0413" "0131" "01222"
#> LT-HSC_202 Prog_724 Prog_731 Prog_737 Prog_743 Prog_749 Prog_755 Prog_761 LT-HSC_203
#> "031" "033" "0112" "031" "01213" "043" "0213" "0412" "0213"
#> Prog_725 Prog_732 Prog_738 Prog_744 Prog_750 Prog_756 Prog_762 LT-HSC_204 Prog_726
#> "031" "043" "033" "033" "0413" "043" "031" "032" "031"
#> HSPC_769 HSPC_775 HSPC_781 HSPC_787 HSPC_793 HSPC_799 LT-HSC_205 HSPC_763 HSPC_770
#> "023" "023" "022" "023" "0212" "023" "023" "0212" "042"
#> HSPC_776 HSPC_782 HSPC_788 HSPC_794 HSPC_800 LT-HSC_206 HSPC_764 HSPC_771 HSPC_777
#> "023" "022" "023" "032" "0413" "022" "022" "032" "032"
#> HSPC_783 HSPC_789 HSPC_795 HSPC_801 LT-HSC_207 HSPC_765 HSPC_772 HSPC_778 HSPC_784
#> "022" "042" "032" "031" "042" "023" "042" "031" "031"
#> HSPC_790 HSPC_796 HSPC_802 LT-HSC_208 HSPC_766 HSPC_773 HSPC_779 HSPC_785 HSPC_791
#> "042" "01212" "022" "022" "01221" "032" "042" "031" "043"
#> HSPC_797 HSPC_803 LT-HSC_209 HSPC_767 HSPC_774 HSPC_780 HSPC_786 HSPC_792 HSPC_798
#> "032" "022" "02112" "01221" "032" "031" "031" "0213" "022"
#> HSPC_804 LT-HSC_210 HSPC_768 Prog_769 Prog_775 Prog_781 Prog_787 Prog_793 Prog_799
#> "022" "022" "023" "01223" "033" "01223" "043" "0132" "033"
#> LT-HSC_211 Prog_763 Prog_770 Prog_776 Prog_782 Prog_788 Prog_794 Prog_800 LT-HSC_212
#> "042" "01221" "014" "0112" "01221" "0112" "01222" "01223" "031"
#> Prog_764 Prog_771 Prog_777 Prog_783 Prog_789 Prog_795 Prog_801 LT-HSC_213 Prog_765
#> "01223" "014" "01211" "014" "01211" "01211" "0132" "022" "0131"
#> Prog_772 Prog_778 Prog_784 Prog_790 Prog_796 Prog_802 LT-HSC_214 Prog_766 Prog_773
#> "01223" "023" "032" "0112" "0412" "014" "031" "0212" "0212"
#> Prog_779 Prog_785 Prog_791 Prog_797 Prog_803 LT-HSC_215 Prog_767 Prog_774 Prog_780
#> "0131" "033" "01211" "031" "043" "032" "01113" "01212" "01113"
#> Prog_786 Prog_792 Prog_798 Prog_804 LT-HSC_216 Prog_768 HSPC_811 HSPC_817 HSPC_823
#> "01113" "0131" "0131" "01212" "0411" "01221" "0212" "0212" "0212"
#> HSPC_829 HSPC_835 HSPC_841 HSPC_847 HSPC_805 HSPC_812 HSPC_818 HSPC_824 HSPC_830
#> "0213" "032" "043" "023" "0212" "01221" "031" "031" "0212"
#> HSPC_836 HSPC_842 HSPC_848 HSPC_806 HSPC_813 HSPC_819 HSPC_825 HSPC_831 HSPC_837
#> "023" "023" "022" "023" "01221" "042" "031" "031" "0412"
#> HSPC_843 HSPC_849 HSPC_807 HSPC_814 HSPC_820 HSPC_826 HSPC_832 HSPC_838 HSPC_844
#> "031" "022" "01212" "0413" "01221" "031" "032" "032" "022"
#> HSPC_850 HSPC_808 HSPC_815 HSPC_821 HSPC_827 HSPC_833 HSPC_839 HSPC_845 HSPC_851
#> "02111" "01221" "032" "042" "022" "01221" "0413" "031" "023"
#> HSPC_809 HSPC_816 HSPC_822 HSPC_828 HSPC_834 HSPC_840 HSPC_846 HSPC_852 HSPC_810
#> "022" "042" "031" "032" "032" "022" "042" "022" "022"
#> Prog_811 Prog_817 Prog_823 Prog_829 Prog_835 Prog_841 Prog_847 Prog_805 Prog_812
#> "014" "0132" "031" "01212" "014" "0411" "01223" "042" "023"
#> Prog_818 Prog_824 Prog_830 Prog_836 Prog_842 Prog_848 Prog_806 Prog_813 Prog_819
#> "014" "01223" "0112" "0131" "014" "022" "033" "0112" "0112"
#> Prog_825 Prog_831 Prog_837 Prog_843 Prog_849 Prog_807 Prog_814 Prog_820 Prog_826
#> "01113" "014" "014" "0131" "042" "014" "0112" "0132" "0112"
#> Prog_832 Prog_838 Prog_844 Prog_850 Prog_808 Prog_815 Prog_821 Prog_827 Prog_833
#> "01211" "0112" "014" "014" "01212" "014" "01113" "033" "01221"
#> Prog_839 Prog_845 Prog_851 Prog_809 Prog_816 Prog_822 Prog_828 Prog_834 Prog_840
#> "0131" "0131" "033" "0132" "01223" "01113" "01113" "01212" "01212"
#> Prog_846 Prog_852 Prog_810
#> "01211" "0411" "0131"
get_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 1314))
#> HSPC_007 HSPC_013 HSPC_019 HSPC_025 HSPC_031 HSPC_037 LT-HSC_001 HSPC_001 HSPC_008
#> "0213" "023" "02112" "042" "032" "042" "023" "01221" "042"
#> HSPC_014 HSPC_020 HSPC_026 HSPC_032 HSPC_038 LT-HSC_002 HSPC_002 HSPC_009 HSPC_015
#> "022" "042" "0412" "02111" "022" "042" "022" "022" "023"
#> HSPC_021 HSPC_027 HSPC_033 HSPC_039 LT-HSC_003 HSPC_003 HSPC_010 HSPC_016 HSPC_022
#> "022" "033" "031" "02112" "023" "0121" "0213" "01221" "0412"
#> HSPC_028 HSPC_034 HSPC_040 LT-HSC_004 HSPC_004 HSPC_011 HSPC_017 HSPC_023 HSPC_029
#> "031" "0121" "032" "022" "031" "042" "022" "042" "02112"
#> HSPC_035 HSPC_041 LT-HSC_005 HSPC_005 HSPC_012 HSPC_018 HSPC_024 HSPC_030 HSPC_036
#> "022" "042" "02112" "02112" "042" "042" "022" "031" "0121"
#> HSPC_042 LT-HSC_006 HSPC_006 Prog_007 Prog_013 Prog_019 Prog_025 Prog_031 Prog_037
#> "032" "022" "0412" "01223" "0121" "0131" "0411" "033" "033"
#> LT-HSC_007 Prog_001 Prog_008 Prog_014 Prog_020 Prog_026 Prog_032 Prog_038 LT-HSC_008
#> "042" "043" "01112" "0112" "014" "033" "014" "014" "031"
#> Prog_002 Prog_009 Prog_015 Prog_021 Prog_027 Prog_033 Prog_039 LT-HSC_009 Prog_003
#> "0121" "01112" "0121" "014" "01222" "0112" "01112" "022" "01222"
#> Prog_010 Prog_016 Prog_022 Prog_028 Prog_034 Prog_040 LT-HSC_010 Prog_004 Prog_011
#> "0412" "0411" "0411" "0112" "02112" "042" "0412" "033" "014"
#> Prog_017 Prog_023 Prog_029 Prog_035 Prog_041 LT-HSC_011 Prog_005 Prog_012 Prog_018
#> "0121" "01222" "014" "01111" "0213" "0213" "0213" "022" "022"
#> Prog_024 Prog_030 Prog_036 Prog_042 LT-HSC_012 Prog_006 HSPC_049 HSPC_055 HSPC_061
#> "014" "0411" "0412" "0411" "0411" "01111" "031" "042" "042"
#> HSPC_067 HSPC_073 HSPC_079 LT-HSC_013 HSPC_043 HSPC_050 HSPC_056 HSPC_062 HSPC_068
#> "042" "022" "0412" "022" "042" "043" "022" "0413" "022"
#> HSPC_074 HSPC_080 LT-HSC_014 HSPC_044 HSPC_051 HSPC_057 HSPC_063 HSPC_069 HSPC_075
#> "022" "032" "022" "043" "032" "022" "0412" "032" "022"
#> HSPC_081 LT-HSC_015 HSPC_045 HSPC_052 HSPC_058 HSPC_064 HSPC_070 HSPC_076 HSPC_082
#> "032" "022" "042" "043" "031" "0413" "033" "032" "042"
#> LT-HSC_016 HSPC_046 HSPC_053 HSPC_059 HSPC_065 HSPC_071 HSPC_077 HSPC_083 LT-HSC_017
#> "022" "032" "0121" "02112" "032" "0413" "0121" "022" "022"
#> HSPC_047 HSPC_054 HSPC_060 HSPC_066 HSPC_072 HSPC_078 HSPC_084 LT-HSC_018 HSPC_048
#> "023" "031" "031" "031" "0413" "043" "042" "022" "032"
#> Prog_049 Prog_055 Prog_061 Prog_067 Prog_073 Prog_079 LT-HSC_019 Prog_043 Prog_050
#> "01112" "0121" "0112" "014" "032" "01112" "02112" "0132" "0121"
#> Prog_056 Prog_062 Prog_068 Prog_074 Prog_080 LT-HSC_020 Prog_044 Prog_051 Prog_057
#> "01222" "042" "032" "0411" "043" "031" "032" "014" "0131"
#> Prog_063 Prog_069 Prog_075 Prog_081 LT-HSC_021 Prog_045 Prog_052 Prog_058 Prog_064
#> "043" "01222" "0121" "01112" "0413" "0132" "043" "014" "014"
#> Prog_070 Prog_076 Prog_082 LT-HSC_022 Prog_046 Prog_053 Prog_059 Prog_065 Prog_071
#> "0412" "014" "01111" "022" "0112" "0112" "01222" "0131" "01223"
#> Prog_077 Prog_083 LT-HSC_023 Prog_047 Prog_054 Prog_060 Prog_066 Prog_072 Prog_078
#> "01222" "0121" "022" "0121" "0411" "0213" "014" "033" "014"
#> Prog_084 LT-HSC_024 Prog_048 HSPC_091 HSPC_097 HSPC_103 HSPC_109 HSPC_115 HSPC_121
#> "0112" "033" "032" "0212" "023" "022" "043" "022" "023"
#> LT-HSC_025 HSPC_085 HSPC_092 HSPC_098 HSPC_104 HSPC_110 HSPC_116 HSPC_122 LT-HSC_026
#> "0212" "042" "0212" "043" "023" "043" "02111" "031" "022"
#> HSPC_086 HSPC_093 HSPC_099 HSPC_105 HSPC_111 HSPC_117 HSPC_123 LT-HSC_027 HSPC_087
#> "02112" "02112" "042" "022" "022" "042" "022" "023" "022"
#> HSPC_094 HSPC_100 HSPC_106 HSPC_112 HSPC_118 HSPC_124 LT-HSC_028 HSPC_088 HSPC_095
#> "01221" "032" "022" "02111" "031" "02111" "032" "032" "022"
#> HSPC_101 HSPC_107 HSPC_113 HSPC_119 HSPC_125 LT-HSC_029 HSPC_089 HSPC_096 HSPC_102
#> "0121" "042" "023" "023" "031" "0212" "032" "043" "0121"
#> HSPC_108 HSPC_114 HSPC_120 HSPC_126 LT-HSC_030 HSPC_090 Prog_091 Prog_097 Prog_103
#> "031" "032" "031" "032" "0212" "01221" "01111" "0121" "01221"
#> Prog_109 Prog_115 Prog_121 LT-HSC_031 Prog_085 Prog_092 Prog_098 Prog_104 Prog_110
#> "0412" "014" "0213" "032" "01222" "033" "0112" "02111" "01112"
#> Prog_116 Prog_122 LT-HSC_032 Prog_086 Prog_093 Prog_099 Prog_105 Prog_111 Prog_117
#> "01221" "033" "01111" "0212" "01223" "01222" "0121" "014" "0132"
#> Prog_123 LT-HSC_033 Prog_087 Prog_094 Prog_100 Prog_106 Prog_112 Prog_118 Prog_124
#> "0121" "031" "0121" "014" "0112" "031" "01112" "0412" "033"
#> LT-HSC_034 Prog_088 Prog_095 Prog_101 Prog_107 Prog_113 Prog_119 Prog_125 LT-HSC_035
#> "031" "043" "0112" "0131" "01112" "01223" "01111" "031" "0212"
#> Prog_089 Prog_096 Prog_102 Prog_108 Prog_114 Prog_120 Prog_126 LT-HSC_036 Prog_090
#> "014" "032" "031" "0411" "0413" "023" "014" "033" "0112"
#> HSPC_133 HSPC_139 HSPC_145 HSPC_151 HSPC_157 HSPC_163 LT-HSC_037 HSPC_127 HSPC_134
#> "022" "022" "023" "042" "043" "023" "023" "0412" "023"
#> HSPC_140 HSPC_146 HSPC_152 HSPC_158 HSPC_164 LT-HSC_038 HSPC_128 HSPC_135 HSPC_141
#> "023" "0412" "022" "042" "022" "023" "023" "031" "022"
#> HSPC_147 HSPC_153 HSPC_159 HSPC_165 LT-HSC_039 HSPC_129 HSPC_136 HSPC_142 HSPC_148
#> "023" "022" "042" "043" "022" "02111" "042" "042" "043"
#> HSPC_154 HSPC_160 HSPC_166 LT-HSC_040 HSPC_130 HSPC_137 HSPC_143 HSPC_149 HSPC_155
#> "043" "02112" "042" "022" "042" "02111" "022" "022" "023"
#> HSPC_161 HSPC_167 LT-HSC_041 HSPC_131 HSPC_138 HSPC_144 HSPC_150 HSPC_156 HSPC_162
#> "042" "023" "022" "022" "01221" "031" "02111" "01221" "032"
#> HSPC_168 LT-HSC_042 HSPC_132 Prog_133 Prog_139 Prog_145 Prog_151 Prog_157 Prog_163
#> "0413" "022" "0132" "0121" "0112" "0121" "032" "01222" "01113"
#> LT-HSC_043 Prog_127 Prog_134 Prog_140 Prog_146 Prog_152 Prog_158 Prog_164 LT-HSC_044
#> "0132" "032" "043" "01111" "01113" "043" "01112" "0213" "043"
#> Prog_128 Prog_135 Prog_141 Prog_147 Prog_153 Prog_159 Prog_165 LT-HSC_045 Prog_129
#> "0121" "032" "0132" "02112" "01222" "0412" "043" "0412" "0131"
#> Prog_136 Prog_142 Prog_148 Prog_154 Prog_160 Prog_166 LT-HSC_046 Prog_130 Prog_137
#> "0132" "033" "023" "033" "022" "014" "031" "0131" "01222"
#> Prog_143 Prog_149 Prog_155 Prog_161 Prog_167 LT-HSC_047 Prog_131 Prog_138 Prog_144
#> "0131" "0413" "0121" "033" "0121" "0213" "033" "02111" "043"
#> Prog_150 Prog_156 Prog_162 Prog_168 LT-HSC_048 Prog_132 HSPC_175 HSPC_181 HSPC_187
#> "0131" "0212" "0412" "0131" "023" "0131" "042" "022" "022"
#> HSPC_193 HSPC_199 HSPC_205 LT-HSC_049 HSPC_169 HSPC_176 HSPC_182 HSPC_188 HSPC_194
#> "033" "031" "022" "022" "042" "022" "023" "02111" "02112"
#> HSPC_200 HSPC_206 LT-HSC_050 HSPC_170 HSPC_177 HSPC_183 HSPC_189 HSPC_195 HSPC_201
#> "022" "01223" "022" "023" "022" "033" "031" "0121" "02112"
#> HSPC_207 LT-HSC_051 HSPC_171 HSPC_178 HSPC_184 HSPC_190 HSPC_196 HSPC_202 HSPC_208
#> "032" "022" "022" "031" "0212" "0413" "042" "032" "022"
#> LT-HSC_052 HSPC_172 HSPC_179 HSPC_185 HSPC_191 HSPC_197 HSPC_203 HSPC_209 LT-HSC_053
#> "01221" "01221" "01221" "023" "022" "02112" "042" "02112" "02112"
#> HSPC_173 HSPC_180 HSPC_186 HSPC_192 HSPC_198 HSPC_204 HSPC_210 LT-HSC_054 HSPC_174
#> "023" "043" "033" "022" "031" "0412" "043" "022" "031"
#> Prog_175 Prog_181 Prog_187 Prog_193 Prog_199 Prog_205 LT-HSC_055 Prog_169 Prog_176
#> "0411" "02112" "033" "042" "032" "0413" "0132" "02112" "01221"
#> Prog_182 Prog_188 Prog_194 Prog_200 Prog_206 LT-HSC_056 Prog_170 Prog_177 Prog_183
#> "043" "014" "023" "043" "01222" "0131" "01112" "042" "0132"
#> Prog_189 Prog_195 Prog_201 Prog_207 LT-HSC_057 Prog_171 Prog_178 Prog_184 Prog_190
#> "01222" "042" "0412" "014" "031" "042" "0112" "0131" "0121"
#> Prog_196 Prog_202 Prog_208 LT-HSC_058 Prog_172 Prog_179 Prog_185 Prog_191 Prog_197
#> "01111" "0213" "033" "032" "014" "0131" "01111" "033" "0131"
#> Prog_203 Prog_209 LT-HSC_059 Prog_173 Prog_180 Prog_186 Prog_192 Prog_198 Prog_204
#> "0132" "0131" "0212" "043" "032" "01223" "0121" "02112" "023"
#> Prog_210 LT-HSC_060 Prog_174 HSPC_217 HSPC_223 HSPC_229 HSPC_235 HSPC_241 HSPC_247
#> "032" "0131" "0213" "0212" "022" "023" "022" "02112" "023"
#> LT-HSC_061 HSPC_211 HSPC_218 HSPC_224 HSPC_230 HSPC_236 HSPC_242 HSPC_248 LT-HSC_062
#> "0212" "042" "022" "022" "042" "043" "023" "022" "023"
#> HSPC_212 HSPC_219 HSPC_225 HSPC_231 HSPC_237 HSPC_243 HSPC_249 LT-HSC_063 HSPC_213
#> "023" "042" "022" "023" "022" "0412" "022" "033" "0413"
#> HSPC_220 HSPC_226 HSPC_232 HSPC_238 HSPC_244 HSPC_250 LT-HSC_064 HSPC_214 HSPC_221
#> "022" "02112" "023" "0212" "032" "0413" "0112" "0121" "031"
#> HSPC_227 HSPC_233 HSPC_239 HSPC_245 HSPC_251 LT-HSC_065 HSPC_215 HSPC_222 HSPC_228
#> "022" "042" "022" "022" "0413" "031" "0412" "042" "023"
#> HSPC_234 HSPC_240 HSPC_246 HSPC_252 LT-HSC_066 HSPC_216 Prog_217 Prog_223 Prog_229
#> "02112" "031" "022" "0213" "031" "0121" "01111" "042" "01112"
#> Prog_235 Prog_241 Prog_247 LT-HSC_067 Prog_211 Prog_218 Prog_224 Prog_230 Prog_236
#> "023" "022" "033" "0213" "0112" "01222" "0132" "0413" "0121"
#> Prog_242 Prog_248 LT-HSC_068 Prog_212 Prog_219 Prog_225 Prog_231 Prog_237 Prog_243
#> "014" "043" "01221" "014" "0213" "033" "0132" "042" "0131"
#> Prog_249 LT-HSC_069 Prog_213 Prog_220 Prog_226 Prog_232 Prog_238 Prog_244 Prog_250
#> "01111" "032" "043" "0213" "031" "033" "0121" "032" "014"
#> LT-HSC_070 Prog_214 Prog_221 Prog_227 Prog_233 Prog_239 Prog_245 Prog_251 LT-HSC_071
#> "043" "0413" "01111" "0132" "01222" "01111" "0121" "0212" "032"
#> Prog_215 Prog_222 Prog_228 Prog_234 Prog_240 Prog_246 Prog_252 LT-HSC_072 Prog_216
#> "01113" "032" "0131" "0121" "01221" "033" "032" "0121" "01113"
#> HSPC_259 HSPC_265 HSPC_271 HSPC_277 HSPC_283 HSPC_289 LT-HSC_073 HSPC_253 HSPC_260
#> "023" "022" "0412" "023" "022" "022" "023" "0413" "02112"
#> HSPC_266 HSPC_272 HSPC_278 HSPC_284 HSPC_290 LT-HSC_074 HSPC_254 HSPC_261 HSPC_267
#> "022" "02112" "042" "02112" "0413" "022" "022" "0132" "031"
#> HSPC_273 HSPC_279 HSPC_285 HSPC_291 LT-HSC_075 HSPC_255 HSPC_262 HSPC_268 HSPC_274
#> "02112" "043" "0121" "033" "031" "032" "0212" "0121" "022"
#> HSPC_280 HSPC_286 HSPC_292 LT-HSC_076 HSPC_256 HSPC_263 HSPC_269 HSPC_275 HSPC_281
#> "0412" "042" "0412" "042" "0112" "0412" "0132" "0131" "023"
#> HSPC_287 HSPC_293 LT-HSC_077 HSPC_257 HSPC_264 HSPC_270 HSPC_276 HSPC_282 HSPC_288
#> "0413" "0412" "023" "0413" "022" "032" "032" "0121" "0121"
#> HSPC_294 LT-HSC_078 HSPC_258 Prog_259 Prog_265 Prog_271 Prog_277 Prog_283 Prog_289
#> "0413" "022" "01222" "031" "0112" "033" "031" "042" "0412"
#> LT-HSC_079 Prog_253 Prog_260 Prog_266 Prog_272 Prog_278 Prog_284 Prog_290 LT-HSC_080
#> "02112" "014" "01223" "01221" "01223" "0112" "014" "0112" "032"
#> Prog_254 Prog_261 Prog_267 Prog_273 Prog_279 Prog_285 Prog_291 LT-HSC_081 Prog_255
#> "0112" "014" "0131" "0131" "01112" "014" "0411" "01221" "0121"
#> Prog_262 Prog_268 Prog_274 Prog_280 Prog_286 Prog_292 LT-HSC_082 Prog_256 Prog_263
#> "01223" "01223" "014" "033" "0112" "01222" "032" "042" "0131"
#> Prog_269 Prog_275 Prog_281 Prog_287 Prog_293 LT-HSC_083 Prog_257 Prog_264 Prog_270
#> "0112" "01223" "014" "0131" "033" "0212" "0213" "023" "0131"
#> Prog_276 Prog_282 Prog_288 Prog_294 LT-HSC_084 Prog_258 HSPC_301 HSPC_307 HSPC_313
#> "0121" "01113" "0112" "01222" "033" "0132" "023" "022" "042"
#> HSPC_319 HSPC_325 HSPC_331 LT-HSC_085 HSPC_295 HSPC_302 HSPC_308 HSPC_314 HSPC_320
#> "0212" "022" "022" "022" "0413" "023" "043" "042" "043"
#> HSPC_326 HSPC_332 LT-HSC_086 HSPC_296 HSPC_303 HSPC_309 HSPC_315 HSPC_321 HSPC_327
#> "022" "0121" "042" "022" "01221" "022" "022" "042" "0121"
#> HSPC_333 LT-HSC_087 HSPC_297 HSPC_304 HSPC_310 HSPC_316 HSPC_322 HSPC_328 HSPC_334
#> "0121" "0212" "022" "032" "022" "023" "031" "042" "022"
#> LT-HSC_088 HSPC_298 HSPC_305 HSPC_311 HSPC_317 HSPC_323 HSPC_329 HSPC_335 LT-HSC_089
#> "043" "032" "0412" "0212" "023" "031" "042" "022" "022"
#> HSPC_299 HSPC_306 HSPC_312 HSPC_318 HSPC_324 HSPC_330 HSPC_336 LT-HSC_090 HSPC_300
#> "033" "033" "0413" "022" "031" "031" "022" "032" "01221"
#> Prog_301 Prog_307 Prog_313 Prog_319 Prog_325 Prog_331 LT-HSC_091 Prog_295 Prog_302
#> "0411" "0412" "0413" "0132" "0121" "0121" "01111" "0412" "0212"
#> Prog_308 Prog_314 Prog_320 Prog_326 Prog_332 LT-HSC_092 Prog_296 Prog_303 Prog_309
#> "01223" "033" "01221" "01111" "01222" "0212" "01222" "022" "022"
#> Prog_315 Prog_321 Prog_327 Prog_333 LT-HSC_093 Prog_297 Prog_304 Prog_310 Prog_316
#> "0411" "0411" "0121" "043" "042" "043" "0121" "0412" "0411"
#> Prog_322 Prog_328 Prog_334 LT-HSC_094 Prog_298 Prog_305 Prog_311 Prog_317 Prog_323
#> "043" "0411" "014" "042" "014" "0413" "043" "0212" "0411"
#> Prog_329 Prog_335 LT-HSC_095 Prog_299 Prog_306 Prog_312 Prog_318 Prog_324 Prog_330
#> "0411" "0413" "01112" "0112" "022" "01111" "01111" "0112" "0132"
#> Prog_336 LT-HSC_096 Prog_300 HSPC_343 HSPC_349 HSPC_355 HSPC_361 HSPC_367 HSPC_373
#> "0132" "0121" "0131" "0132" "031" "0213" "023" "022" "023"
#> LT-HSC_097 HSPC_337 HSPC_344 HSPC_350 HSPC_356 HSPC_362 HSPC_368 HSPC_374 LT-HSC_098
#> "0212" "022" "0412" "022" "043" "0411" "042" "032" "0112"
#> HSPC_338 HSPC_345 HSPC_351 HSPC_357 HSPC_363 HSPC_369 HSPC_375 LT-HSC_099 HSPC_339
#> "01112" "043" "043" "02111" "022" "02111" "02111" "023" "032"
#> HSPC_346 HSPC_352 HSPC_358 HSPC_364 HSPC_370 HSPC_376 LT-HSC_100 HSPC_340 HSPC_347
#> "0121" "0412" "042" "042" "0131" "042" "01112" "0213" "02112"
#> HSPC_353 HSPC_359 HSPC_365 HSPC_371 HSPC_377 LT-HSC_101 HSPC_341 HSPC_348 HSPC_354
#> "0121" "032" "023" "0121" "0413" "0411" "01221" "033" "022"
#> HSPC_360 HSPC_366 HSPC_372 HSPC_378 LT-HSC_102 HSPC_342 Prog_343 Prog_349 Prog_355
#> "042" "0213" "042" "0212" "01112" "0131" "0132" "0411" "0413"
#> Prog_361 Prog_367 Prog_373 LT-HSC_103 Prog_337 Prog_344 Prog_350 Prog_356 Prog_362
#> "014" "0131" "01113" "0132" "01111" "02112" "014" "0112" "0412"
#> Prog_368 Prog_374 LT-HSC_104 Prog_338 Prog_345 Prog_351 Prog_357 Prog_363 Prog_369
#> "014" "014" "0212" "01221" "0411" "014" "01112" "014" "0411"
#> Prog_375 LT-HSC_105 Prog_339 Prog_346 Prog_352 Prog_358 Prog_364 Prog_370 Prog_376
#> "01112" "0411" "0112" "014" "01112" "031" "0112" "0411" "0112"
#> LT-HSC_106 Prog_340 Prog_347 Prog_353 Prog_359 Prog_365 Prog_371 Prog_377 LT-HSC_107
#> "0412" "014" "0213" "0132" "0112" "0213" "0121" "01111" "023"
#> Prog_341 Prog_348 Prog_354 Prog_360 Prog_366 Prog_372 Prog_378 LT-HSC_108 Prog_342
#> "0121" "0212" "0412" "01112" "014" "0112" "032" "0121" "01112"
#> HSPC_385 HSPC_391 HSPC_397 HSPC_403 HSPC_409 HSPC_415 HSPC_421 HSPC_379 HSPC_386
#> "02111" "031" "02111" "042" "023" "023" "043" "0212" "042"
#> HSPC_392 HSPC_398 HSPC_404 HSPC_410 HSPC_416 HSPC_422 HSPC_380 HSPC_387 HSPC_393
#> "032" "032" "0112" "0121" "031" "032" "032" "0412" "0411"
#> HSPC_399 HSPC_405 HSPC_411 HSPC_417 HSPC_423 HSPC_381 HSPC_388 HSPC_394 HSPC_400
#> "031" "032" "0121" "01221" "01221" "02112" "01221" "02111" "0412"
#> HSPC_406 HSPC_412 HSPC_418 HSPC_424 HSPC_382 HSPC_389 HSPC_395 HSPC_401 HSPC_407
#> "042" "0131" "031" "0413" "01221" "014" "043" "02111" "0131"
#> HSPC_413 HSPC_419 HSPC_425 HSPC_383 HSPC_390 HSPC_396 HSPC_402 HSPC_408 HSPC_414
#> "042" "0131" "0413" "022" "042" "032" "032" "01111" "02112"
#> HSPC_420 HSPC_426 HSPC_384 Prog_385 Prog_391 Prog_397 Prog_403 Prog_409 Prog_415
#> "01221" "042" "02112" "01111" "0213" "01112" "0112" "01112" "01112"
#> Prog_421 Prog_379 Prog_386 Prog_392 Prog_398 Prog_404 Prog_410 Prog_416 Prog_422
#> "01112" "0112" "01112" "01222" "01112" "01113" "0112" "0112" "0413"
#> Prog_380 Prog_387 Prog_393 Prog_399 Prog_405 Prog_411 Prog_417 Prog_423 Prog_381
#> "0112" "0131" "0112" "01223" "01223" "042" "0411" "0412" "0112"
#> Prog_388 Prog_394 Prog_400 Prog_406 Prog_412 Prog_418 Prog_424 Prog_382 Prog_389
#> "01112" "033" "02111" "0112" "0121" "014" "0112" "031" "0132"
#> Prog_395 Prog_401 Prog_407 Prog_413 Prog_419 Prog_425 Prog_383 Prog_390 Prog_396
#> "01112" "0132" "033" "0121" "01112" "014" "01111" "043" "014"
#> Prog_402 Prog_408 Prog_414 Prog_420 Prog_426 Prog_384 HSPC_433 HSPC_439 HSPC_445
#> "0412" "014" "0131" "0121" "0121" "0411" "0212" "0212" "0212"
#> HSPC_451 HSPC_457 HSPC_463 LT-HSC_109 HSPC_427 HSPC_434 HSPC_440 HSPC_446 HSPC_452
#> "023" "022" "032" "022" "023" "0213" "042" "022" "02111"
#> HSPC_458 HSPC_464 LT-HSC_110 HSPC_428 HSPC_435 HSPC_441 HSPC_447 HSPC_453 HSPC_459
#> "02112" "02112" "031" "0212" "031" "031" "033" "032" "031"
#> HSPC_465 LT-HSC_111 HSPC_429 HSPC_436 HSPC_442 HSPC_448 HSPC_454 HSPC_460 HSPC_466
#> "031" "022" "02111" "0132" "01221" "031" "0132" "031" "042"
#> LT-HSC_112 HSPC_430 HSPC_437 HSPC_443 HSPC_449 HSPC_455 HSPC_461 HSPC_467 LT-HSC_113
#> "032" "031" "02112" "031" "031" "022" "042" "031" "032"
#> HSPC_431 HSPC_438 HSPC_444 HSPC_450 HSPC_456 HSPC_462 HSPC_468 LT-HSC_114 HSPC_432
#> "031" "0213" "022" "022" "01221" "031" "031" "023" "022"
#> Prog_433 Prog_439 Prog_445 Prog_451 Prog_457 Prog_463 LT-HSC_115 Prog_427 Prog_434
#> "031" "033" "032" "0131" "014" "033" "01221" "022" "01111"
#> Prog_440 Prog_446 Prog_452 Prog_458 Prog_464 LT-HSC_116 Prog_428 Prog_435 Prog_441
#> "043" "032" "0212" "043" "032" "031" "01221" "0411" "0121"
#> Prog_447 Prog_453 Prog_459 Prog_465 LT-HSC_117 Prog_429 Prog_436 Prog_442 Prog_448
#> "01223" "014" "033" "043" "031" "01111" "01221" "02112" "033"
#> Prog_454 Prog_460 Prog_466 LT-HSC_118 Prog_430 Prog_437 Prog_443 Prog_449 Prog_455
#> "0412" "042" "0411" "02112" "0112" "0132" "0131" "01111" "031"
#> Prog_461 Prog_467 LT-HSC_119 Prog_431 Prog_438 Prog_444 Prog_450 Prog_456 Prog_462
#> "022" "033" "0213" "033" "022" "01111" "01222" "01223" "042"
#> Prog_468 LT-HSC_120 Prog_432 HSPC_475 HSPC_481 HSPC_487 HSPC_493 HSPC_499 HSPC_505
#> "0411" "0413" "043" "022" "023" "0212" "022" "022" "042"
#> LT-HSC_121 HSPC_469 HSPC_476 HSPC_482 HSPC_488 HSPC_494 HSPC_500 HSPC_506 LT-HSC_122
#> "0213" "023" "02111" "022" "022" "022" "022" "022" "042"
#> HSPC_470 HSPC_477 HSPC_483 HSPC_489 HSPC_495 HSPC_501 HSPC_507 LT-HSC_123 HSPC_471
#> "022" "01221" "022" "042" "043" "023" "022" "022" "022"
#> HSPC_478 HSPC_484 HSPC_490 HSPC_496 HSPC_502 HSPC_508 LT-HSC_124 HSPC_472 HSPC_479
#> "022" "02112" "031" "031" "032" "0131" "031" "032" "031"
#> HSPC_485 HSPC_491 HSPC_497 HSPC_503 HSPC_509 LT-HSC_125 HSPC_473 HSPC_480 HSPC_486
#> "0121" "0412" "022" "0121" "042" "031" "031" "032" "042"
#> HSPC_492 HSPC_498 HSPC_504 HSPC_510 LT-HSC_126 HSPC_474 Prog_475 Prog_481 Prog_487
#> "032" "031" "022" "0412" "032" "032" "0131" "033" "0131"
#> Prog_493 Prog_499 Prog_505 LT-HSC_127 Prog_469 Prog_476 Prog_482 Prog_488 Prog_494
#> "01222" "0121" "0131" "0212" "042" "0121" "01222" "0131" "043"
#> Prog_500 Prog_506 LT-HSC_128 Prog_470 Prog_477 Prog_483 Prog_489 Prog_495 Prog_501
#> "0131" "0121" "031" "0121" "0112" "043" "0121" "032" "01223"
#> Prog_507 LT-HSC_129 Prog_471 Prog_478 Prog_484 Prog_490 Prog_496 Prog_502 Prog_508
#> "0411" "02112" "01222" "01113" "01223" "043" "033" "0112" "01113"
#> LT-HSC_130 Prog_472 Prog_479 Prog_485 Prog_491 Prog_497 Prog_503 Prog_509 LT-HSC_131
#> "0132" "043" "01222" "0132" "0131" "0411" "043" "031" "031"
#> Prog_473 Prog_480 Prog_486 Prog_492 Prog_498 Prog_504 Prog_510 LT-HSC_132 Prog_474
#> "01223" "023" "0121" "031" "0213" "0121" "042" "014" "032"
#> HSPC_517 HSPC_523 HSPC_529 HSPC_535 HSPC_541 HSPC_547 LT-HSC_133 HSPC_511 HSPC_518
#> "023" "032" "02111" "022" "022" "032" "0212" "023" "022"
#> HSPC_524 HSPC_530 HSPC_536 HSPC_542 HSPC_548 LT-HSC_134 HSPC_512 HSPC_519 HSPC_525
#> "022" "022" "02111" "02111" "022" "023" "032" "02112" "023"
#> HSPC_531 HSPC_537 HSPC_543 HSPC_549 LT-HSC_135 HSPC_513 HSPC_520 HSPC_526 HSPC_532
#> "022" "042" "042" "022" "022" "0212" "042" "031" "042"
#> HSPC_538 HSPC_544 HSPC_550 LT-HSC_136 HSPC_514 HSPC_521 HSPC_527 HSPC_533 HSPC_539
#> "031" "0121" "042" "023" "031" "022" "01221" "032" "022"
#> HSPC_545 HSPC_551 LT-HSC_137 HSPC_515 HSPC_522 HSPC_528 HSPC_534 HSPC_540 HSPC_546
#> "022" "042" "022" "031" "022" "0413" "031" "032" "022"
#> HSPC_552 LT-HSC_138 HSPC_516 Prog_517 Prog_523 Prog_529 Prog_535 Prog_541 Prog_547
#> "042" "022" "032" "033" "0112" "0131" "0112" "0131" "0132"
#> LT-HSC_139 Prog_511 Prog_518 Prog_524 Prog_530 Prog_536 Prog_542 Prog_548 LT-HSC_140
#> "031" "031" "0413" "042" "0121" "0112" "0413" "0112" "022"
#> Prog_512 Prog_519 Prog_525 Prog_531 Prog_537 Prog_543 Prog_549 LT-HSC_141 Prog_513
#> "0411" "042" "043" "0131" "022" "014" "0413" "02111" "033"
#> Prog_520 Prog_526 Prog_532 Prog_538 Prog_544 Prog_550 LT-HSC_142 Prog_514 Prog_521
#> "0131" "023" "022" "0212" "023" "0121" "0121" "01223" "0121"
#> Prog_527 Prog_533 Prog_539 Prog_545 Prog_551 LT-HSC_143 Prog_515 Prog_522 Prog_528
#> "0121" "022" "0411" "014" "0121" "0132" "043" "022" "014"
#> Prog_534 Prog_540 Prog_546 Prog_552 LT-HSC_144 Prog_516 HSPC_559 HSPC_565 HSPC_571
#> "043" "023" "023" "0412" "042" "01111" "022" "023" "031"
#> HSPC_577 HSPC_583 HSPC_589 LT-HSC_145 HSPC_553 HSPC_560 HSPC_566 HSPC_572 HSPC_578
#> "022" "02111" "022" "022" "0131" "022" "022" "023" "022"
#> HSPC_584 HSPC_590 LT-HSC_146 HSPC_554 HSPC_561 HSPC_567 HSPC_573 HSPC_579 HSPC_585
#> "022" "042" "031" "022" "02111" "031" "022" "031" "022"
#> HSPC_591 LT-HSC_147 HSPC_555 HSPC_562 HSPC_568 HSPC_574 HSPC_580 HSPC_586 HSPC_592
#> "023" "022" "022" "023" "022" "0121" "032" "032" "031"
#> LT-HSC_148 HSPC_556 HSPC_563 HSPC_569 HSPC_575 HSPC_581 HSPC_587 HSPC_593 LT-HSC_149
#> "042" "032" "031" "0413" "031" "02112" "02112" "022" "022"
#> HSPC_557 HSPC_564 HSPC_570 HSPC_576 HSPC_582 HSPC_588 HSPC_594 LT-HSC_150 HSPC_558
#> "032" "02112" "02112" "022" "022" "0212" "022" "022" "02112"
#> Prog_559 Prog_565 Prog_571 Prog_577 Prog_583 Prog_589 LT-HSC_151 Prog_553 Prog_560
#> "01222" "0121" "01223" "0121" "023" "023" "032" "043" "0121"
#> Prog_566 Prog_572 Prog_578 Prog_584 Prog_590 LT-HSC_152 Prog_554 Prog_561 Prog_567
#> "014" "032" "0413" "0121" "01221" "022" "031" "042" "0121"
#> Prog_573 Prog_579 Prog_585 Prog_591 LT-HSC_153 Prog_555 Prog_562 Prog_568 Prog_574
#> "023" "01223" "033" "023" "022" "031" "0112" "033" "0121"
#> Prog_580 Prog_586 Prog_592 LT-HSC_154 Prog_556 Prog_563 Prog_569 Prog_575 Prog_581
#> "031" "043" "01111" "02112" "033" "0213" "0131" "01113" "01222"
#> Prog_587 Prog_593 LT-HSC_155 Prog_557 Prog_564 Prog_570 Prog_576 Prog_582 Prog_588
#> "0132" "01222" "02111" "01222" "031" "0411" "014" "01223" "031"
#> Prog_594 LT-HSC_156 Prog_558 HSPC_601 HSPC_607 HSPC_613 HSPC_619 HSPC_625 HSPC_631
#> "033" "01222" "031" "042" "023" "042" "02112" "022" "0412"
#> LT-HSC_157 HSPC_595 HSPC_602 HSPC_608 HSPC_614 HSPC_620 HSPC_626 HSPC_632 LT-HSC_158
#> "023" "031" "022" "022" "042" "022" "023" "02112" "022"
#> HSPC_596 HSPC_603 HSPC_609 HSPC_615 HSPC_621 HSPC_627 HSPC_633 LT-HSC_159 HSPC_597
#> "042" "032" "023" "023" "02111" "042" "023" "0411" "042"
#> HSPC_604 HSPC_610 HSPC_616 HSPC_622 HSPC_628 HSPC_634 LT-HSC_160 HSPC_598 HSPC_605
#> "022" "022" "02111" "02111" "042" "042" "023" "042" "0213"
#> HSPC_611 HSPC_617 HSPC_623 HSPC_629 HSPC_635 LT-HSC_161 HSPC_599 HSPC_606 HSPC_612
#> "02112" "032" "042" "042" "042" "023" "022" "031" "031"
#> HSPC_618 HSPC_624 HSPC_630 HSPC_636 LT-HSC_162 HSPC_600 Prog_601 Prog_607 Prog_613
#> "022" "032" "022" "031" "023" "023" "02112" "0121" "033"
#> Prog_619 Prog_625 Prog_631 LT-HSC_163 Prog_595 Prog_602 Prog_608 Prog_614 Prog_620
#> "022" "0413" "032" "022" "022" "0132" "0112" "0132" "042"
#> Prog_626 Prog_632 LT-HSC_164 Prog_596 Prog_603 Prog_609 Prog_615 Prog_621 Prog_627
#> "0121" "01222" "031" "033" "0112" "0121" "0411" "0121" "031"
#> Prog_633 LT-HSC_165 Prog_597 Prog_604 Prog_610 Prog_616 Prog_622 Prog_628 Prog_634
#> "043" "022" "033" "033" "033" "01112" "0121" "0121" "043"
#> LT-HSC_166 Prog_598 Prog_605 Prog_611 Prog_617 Prog_623 Prog_629 Prog_635 LT-HSC_167
#> "042" "0121" "014" "033" "031" "0132" "01221" "033" "022"
#> Prog_599 Prog_606 Prog_612 Prog_618 Prog_624 Prog_630 Prog_636 LT-HSC_168 Prog_600
#> "01222" "031" "0131" "01222" "01222" "0131" "0213" "0131" "01222"
#> HSPC_643 HSPC_649 HSPC_655 HSPC_661 HSPC_667 HSPC_673 LT-HSC_169 HSPC_637 HSPC_644
#> "042" "032" "0212" "042" "022" "022" "023" "031" "0132"
#> HSPC_650 HSPC_656 HSPC_662 HSPC_668 HSPC_674 LT-HSC_170 HSPC_638 HSPC_645 HSPC_651
#> "02112" "022" "022" "032" "031" "042" "0132" "032" "0411"
#> HSPC_657 HSPC_663 HSPC_669 HSPC_675 LT-HSC_171 HSPC_639 HSPC_646 HSPC_652 HSPC_658
#> "023" "0412" "022" "0212" "042" "031" "031" "042" "0412"
#> HSPC_664 HSPC_670 HSPC_676 LT-HSC_172 HSPC_640 HSPC_647 HSPC_653 HSPC_659 HSPC_665
#> "032" "023" "022" "022" "031" "022" "02111" "02112" "042"
#> HSPC_671 HSPC_677 LT-HSC_173 HSPC_641 HSPC_648 HSPC_654 HSPC_660 HSPC_666 HSPC_672
#> "032" "023" "022" "031" "022" "042" "043" "0413" "032"
#> HSPC_678 LT-HSC_174 HSPC_642 Prog_643 Prog_649 Prog_655 Prog_661 Prog_667 Prog_673
#> "022" "031" "02112" "0412" "0112" "0112" "0131" "043" "042"
#> LT-HSC_175 Prog_637 Prog_644 Prog_650 Prog_656 Prog_662 Prog_668 Prog_674 LT-HSC_176
#> "02111" "014" "033" "0121" "033" "033" "023" "033" "022"
#> Prog_638 Prog_645 Prog_651 Prog_657 Prog_663 Prog_669 Prog_675 LT-HSC_177 Prog_639
#> "0112" "043" "031" "01112" "0112" "023" "01223" "022" "014"
#> Prog_646 Prog_652 Prog_658 Prog_664 Prog_670 Prog_676 LT-HSC_178 Prog_640 Prog_647
#> "01223" "01222" "0121" "023" "0121" "033" "02112" "01113" "043"
#> Prog_653 Prog_659 Prog_665 Prog_671 Prog_677 LT-HSC_179 Prog_641 Prog_648 Prog_654
#> "043" "033" "031" "031" "0112" "031" "023" "042" "0132"
#> Prog_660 Prog_666 Prog_672 Prog_678 LT-HSC_180 Prog_642 HSPC_685 HSPC_691 HSPC_697
#> "031" "033" "031" "0411" "043" "032" "0213" "0212" "0413"
#> HSPC_703 HSPC_709 HSPC_715 LT-HSC_181 HSPC_679 HSPC_686 HSPC_692 HSPC_698 HSPC_704
#> "022" "023" "0212" "0212" "031" "02112" "023" "022" "022"
#> HSPC_710 HSPC_716 LT-HSC_182 HSPC_680 HSPC_687 HSPC_693 HSPC_699 HSPC_705 HSPC_711
#> "02111" "022" "0213" "022" "023" "023" "022" "0121" "02111"
#> HSPC_717 LT-HSC_183 HSPC_681 HSPC_688 HSPC_694 HSPC_700 HSPC_706 HSPC_712 HSPC_718
#> "0412" "031" "042" "02111" "02111" "0413" "033" "02111" "02111"
#> LT-HSC_184 HSPC_682 HSPC_689 HSPC_695 HSPC_701 HSPC_707 HSPC_713 HSPC_719 LT-HSC_185
#> "031" "0121" "022" "0132" "042" "042" "0212" "022" "023"
#> HSPC_683 HSPC_690 HSPC_696 HSPC_702 HSPC_708 HSPC_714 HSPC_720 LT-HSC_186 HSPC_684
#> "0412" "022" "043" "022" "031" "022" "0121" "02111" "023"
#> Prog_685 Prog_691 Prog_697 Prog_703 Prog_709 Prog_715 LT-HSC_187 Prog_679 Prog_686
#> "0121" "0213" "0112" "043" "014" "0121" "031" "01223" "0413"
#> Prog_692 Prog_698 Prog_704 Prog_710 Prog_716 LT-HSC_188 Prog_680 Prog_687 Prog_693
#> "032" "0131" "031" "031" "033" "031" "01221" "0121" "01221"
#> Prog_699 Prog_705 Prog_711 Prog_717 LT-HSC_189 Prog_681 Prog_688 Prog_694 Prog_700
#> "0121" "0121" "033" "0121" "02111" "0131" "0112" "033" "01112"
#> Prog_706 Prog_712 Prog_718 LT-HSC_190 Prog_682 Prog_689 Prog_695 Prog_701 Prog_707
#> "0131" "0132" "01222" "023" "0132" "033" "01111" "01112" "033"
#> Prog_713 Prog_719 LT-HSC_191 Prog_683 Prog_690 Prog_696 Prog_702 Prog_708 Prog_714
#> "0131" "0112" "031" "023" "033" "0411" "014" "014" "014"
#> Prog_720 LT-HSC_192 Prog_684 HSPC_727 HSPC_733 HSPC_739 HSPC_745 HSPC_751 HSPC_757
#> "014" "01221" "032" "022" "022" "023" "023" "022" "022"
#> LT-HSC_193 HSPC_721 HSPC_728 HSPC_734 HSPC_740 HSPC_746 HSPC_752 HSPC_758 LT-HSC_194
#> "022" "023" "0213" "0121" "022" "023" "023" "032" "022"
#> HSPC_722 HSPC_729 HSPC_735 HSPC_741 HSPC_747 HSPC_753 HSPC_759 LT-HSC_195 HSPC_723
#> "031" "031" "042" "02112" "022" "031" "032" "032" "032"
#> HSPC_730 HSPC_736 HSPC_742 HSPC_748 HSPC_754 HSPC_760 LT-HSC_196 HSPC_724 HSPC_731
#> "031" "032" "032" "022" "0213" "042" "02111" "032" "0412"
#> HSPC_737 HSPC_743 HSPC_749 HSPC_755 HSPC_761 LT-HSC_197 HSPC_725 HSPC_732 HSPC_738
#> "0121" "031" "022" "031" "032" "022" "023" "032" "022"
#> HSPC_744 HSPC_750 HSPC_756 HSPC_762 LT-HSC_198 HSPC_726 Prog_727 Prog_733 Prog_739
#> "042" "031" "022" "042" "022" "0213" "0121" "033" "0412"
#> Prog_745 Prog_751 Prog_757 LT-HSC_199 Prog_721 Prog_728 Prog_734 Prog_740 Prog_746
#> "033" "033" "0412" "02112" "014" "032" "014" "033" "0411"
#> Prog_752 Prog_758 LT-HSC_200 Prog_722 Prog_729 Prog_735 Prog_741 Prog_747 Prog_753
#> "033" "033" "022" "014" "023" "0121" "0213" "033" "0131"
#> Prog_759 LT-HSC_201 Prog_723 Prog_730 Prog_736 Prog_742 Prog_748 Prog_754 Prog_760
#> "0121" "022" "0112" "0112" "0131" "0213" "0413" "0131" "01222"
#> LT-HSC_202 Prog_724 Prog_731 Prog_737 Prog_743 Prog_749 Prog_755 Prog_761 LT-HSC_203
#> "031" "033" "0112" "031" "0121" "043" "0213" "0412" "0213"
#> Prog_725 Prog_732 Prog_738 Prog_744 Prog_750 Prog_756 Prog_762 LT-HSC_204 Prog_726
#> "031" "043" "033" "033" "0413" "043" "031" "032" "031"
#> HSPC_769 HSPC_775 HSPC_781 HSPC_787 HSPC_793 HSPC_799 LT-HSC_205 HSPC_763 HSPC_770
#> "023" "023" "022" "023" "0212" "023" "023" "0212" "042"
#> HSPC_776 HSPC_782 HSPC_788 HSPC_794 HSPC_800 LT-HSC_206 HSPC_764 HSPC_771 HSPC_777
#> "023" "022" "023" "032" "0413" "022" "022" "032" "032"
#> HSPC_783 HSPC_789 HSPC_795 HSPC_801 LT-HSC_207 HSPC_765 HSPC_772 HSPC_778 HSPC_784
#> "022" "042" "032" "031" "042" "023" "042" "031" "031"
#> HSPC_790 HSPC_796 HSPC_802 LT-HSC_208 HSPC_766 HSPC_773 HSPC_779 HSPC_785 HSPC_791
#> "042" "0121" "022" "022" "01221" "032" "042" "031" "043"
#> HSPC_797 HSPC_803 LT-HSC_209 HSPC_767 HSPC_774 HSPC_780 HSPC_786 HSPC_792 HSPC_798
#> "032" "022" "02112" "01221" "032" "031" "031" "0213" "022"
#> HSPC_804 LT-HSC_210 HSPC_768 Prog_769 Prog_775 Prog_781 Prog_787 Prog_793 Prog_799
#> "022" "022" "023" "01223" "033" "01223" "043" "0132" "033"
#> LT-HSC_211 Prog_763 Prog_770 Prog_776 Prog_782 Prog_788 Prog_794 Prog_800 LT-HSC_212
#> "042" "01221" "014" "0112" "01221" "0112" "01222" "01223" "031"
#> Prog_764 Prog_771 Prog_777 Prog_783 Prog_789 Prog_795 Prog_801 LT-HSC_213 Prog_765
#> "01223" "014" "0121" "014" "0121" "0121" "0132" "022" "0131"
#> Prog_772 Prog_778 Prog_784 Prog_790 Prog_796 Prog_802 LT-HSC_214 Prog_766 Prog_773
#> "01223" "023" "032" "0112" "0412" "014" "031" "0212" "0212"
#> Prog_779 Prog_785 Prog_791 Prog_797 Prog_803 LT-HSC_215 Prog_767 Prog_774 Prog_780
#> "0131" "033" "0121" "031" "043" "032" "01113" "0121" "01113"
#> Prog_786 Prog_792 Prog_798 Prog_804 LT-HSC_216 Prog_768 HSPC_811 HSPC_817 HSPC_823
#> "01113" "0131" "0131" "0121" "0411" "01221" "0212" "0212" "0212"
#> HSPC_829 HSPC_835 HSPC_841 HSPC_847 HSPC_805 HSPC_812 HSPC_818 HSPC_824 HSPC_830
#> "0213" "032" "043" "023" "0212" "01221" "031" "031" "0212"
#> HSPC_836 HSPC_842 HSPC_848 HSPC_806 HSPC_813 HSPC_819 HSPC_825 HSPC_831 HSPC_837
#> "023" "023" "022" "023" "01221" "042" "031" "031" "0412"
#> HSPC_843 HSPC_849 HSPC_807 HSPC_814 HSPC_820 HSPC_826 HSPC_832 HSPC_838 HSPC_844
#> "031" "022" "0121" "0413" "01221" "031" "032" "032" "022"
#> HSPC_850 HSPC_808 HSPC_815 HSPC_821 HSPC_827 HSPC_833 HSPC_839 HSPC_845 HSPC_851
#> "02111" "01221" "032" "042" "022" "01221" "0413" "031" "023"
#> HSPC_809 HSPC_816 HSPC_822 HSPC_828 HSPC_834 HSPC_840 HSPC_846 HSPC_852 HSPC_810
#> "022" "042" "031" "032" "032" "022" "042" "022" "022"
#> Prog_811 Prog_817 Prog_823 Prog_829 Prog_835 Prog_841 Prog_847 Prog_805 Prog_812
#> "014" "0132" "031" "0121" "014" "0411" "01223" "042" "023"
#> Prog_818 Prog_824 Prog_830 Prog_836 Prog_842 Prog_848 Prog_806 Prog_813 Prog_819
#> "014" "01223" "0112" "0131" "014" "022" "033" "0112" "0112"
#> Prog_825 Prog_831 Prog_837 Prog_843 Prog_849 Prog_807 Prog_814 Prog_820 Prog_826
#> "01113" "014" "014" "0131" "042" "014" "0112" "0132" "0112"
#> Prog_832 Prog_838 Prog_844 Prog_850 Prog_808 Prog_815 Prog_821 Prog_827 Prog_833
#> "0121" "0112" "014" "014" "0121" "014" "01113" "033" "01221"
#> Prog_839 Prog_845 Prog_851 Prog_809 Prog_816 Prog_822 Prog_828 Prog_834 Prog_840
#> "0131" "0131" "033" "0132" "01223" "01113" "01113" "0121" "0121"
#> Prog_846 Prog_852 Prog_810
#> "0121" "0411" "0131"
get_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 1324))
#> HSPC_007 HSPC_013 HSPC_019 HSPC_025 HSPC_031 HSPC_037 LT-HSC_001 HSPC_001 HSPC_008
#> "0213" "023" "0211" "042" "032" "042" "023" "01221" "042"
#> HSPC_014 HSPC_020 HSPC_026 HSPC_032 HSPC_038 LT-HSC_002 HSPC_002 HSPC_009 HSPC_015
#> "022" "042" "0412" "0211" "022" "042" "022" "022" "023"
#> HSPC_021 HSPC_027 HSPC_033 HSPC_039 LT-HSC_003 HSPC_003 HSPC_010 HSPC_016 HSPC_022
#> "022" "033" "031" "0211" "023" "0121" "0213" "01221" "0412"
#> HSPC_028 HSPC_034 HSPC_040 LT-HSC_004 HSPC_004 HSPC_011 HSPC_017 HSPC_023 HSPC_029
#> "031" "0121" "032" "022" "031" "042" "022" "042" "0211"
#> HSPC_035 HSPC_041 LT-HSC_005 HSPC_005 HSPC_012 HSPC_018 HSPC_024 HSPC_030 HSPC_036
#> "022" "042" "0211" "0211" "042" "042" "022" "031" "0121"
#> HSPC_042 LT-HSC_006 HSPC_006 Prog_007 Prog_013 Prog_019 Prog_025 Prog_031 Prog_037
#> "032" "022" "0412" "01223" "0121" "0131" "0411" "033" "033"
#> LT-HSC_007 Prog_001 Prog_008 Prog_014 Prog_020 Prog_026 Prog_032 Prog_038 LT-HSC_008
#> "042" "043" "01112" "0112" "014" "033" "014" "014" "031"
#> Prog_002 Prog_009 Prog_015 Prog_021 Prog_027 Prog_033 Prog_039 LT-HSC_009 Prog_003
#> "0121" "01112" "0121" "014" "01222" "0112" "01112" "022" "01222"
#> Prog_010 Prog_016 Prog_022 Prog_028 Prog_034 Prog_040 LT-HSC_010 Prog_004 Prog_011
#> "0412" "0411" "0411" "0112" "0211" "042" "0412" "033" "014"
#> Prog_017 Prog_023 Prog_029 Prog_035 Prog_041 LT-HSC_011 Prog_005 Prog_012 Prog_018
#> "0121" "01222" "014" "01111" "0213" "0213" "0213" "022" "022"
#> Prog_024 Prog_030 Prog_036 Prog_042 LT-HSC_012 Prog_006 HSPC_049 HSPC_055 HSPC_061
#> "014" "0411" "0412" "0411" "0411" "01111" "031" "042" "042"
#> HSPC_067 HSPC_073 HSPC_079 LT-HSC_013 HSPC_043 HSPC_050 HSPC_056 HSPC_062 HSPC_068
#> "042" "022" "0412" "022" "042" "043" "022" "0413" "022"
#> HSPC_074 HSPC_080 LT-HSC_014 HSPC_044 HSPC_051 HSPC_057 HSPC_063 HSPC_069 HSPC_075
#> "022" "032" "022" "043" "032" "022" "0412" "032" "022"
#> HSPC_081 LT-HSC_015 HSPC_045 HSPC_052 HSPC_058 HSPC_064 HSPC_070 HSPC_076 HSPC_082
#> "032" "022" "042" "043" "031" "0413" "033" "032" "042"
#> LT-HSC_016 HSPC_046 HSPC_053 HSPC_059 HSPC_065 HSPC_071 HSPC_077 HSPC_083 LT-HSC_017
#> "022" "032" "0121" "0211" "032" "0413" "0121" "022" "022"
#> HSPC_047 HSPC_054 HSPC_060 HSPC_066 HSPC_072 HSPC_078 HSPC_084 LT-HSC_018 HSPC_048
#> "023" "031" "031" "031" "0413" "043" "042" "022" "032"
#> Prog_049 Prog_055 Prog_061 Prog_067 Prog_073 Prog_079 LT-HSC_019 Prog_043 Prog_050
#> "01112" "0121" "0112" "014" "032" "01112" "0211" "0132" "0121"
#> Prog_056 Prog_062 Prog_068 Prog_074 Prog_080 LT-HSC_020 Prog_044 Prog_051 Prog_057
#> "01222" "042" "032" "0411" "043" "031" "032" "014" "0131"
#> Prog_063 Prog_069 Prog_075 Prog_081 LT-HSC_021 Prog_045 Prog_052 Prog_058 Prog_064
#> "043" "01222" "0121" "01112" "0413" "0132" "043" "014" "014"
#> Prog_070 Prog_076 Prog_082 LT-HSC_022 Prog_046 Prog_053 Prog_059 Prog_065 Prog_071
#> "0412" "014" "01111" "022" "0112" "0112" "01222" "0131" "01223"
#> Prog_077 Prog_083 LT-HSC_023 Prog_047 Prog_054 Prog_060 Prog_066 Prog_072 Prog_078
#> "01222" "0121" "022" "0121" "0411" "0213" "014" "033" "014"
#> Prog_084 LT-HSC_024 Prog_048 HSPC_091 HSPC_097 HSPC_103 HSPC_109 HSPC_115 HSPC_121
#> "0112" "033" "032" "0212" "023" "022" "043" "022" "023"
#> LT-HSC_025 HSPC_085 HSPC_092 HSPC_098 HSPC_104 HSPC_110 HSPC_116 HSPC_122 LT-HSC_026
#> "0212" "042" "0212" "043" "023" "043" "0211" "031" "022"
#> HSPC_086 HSPC_093 HSPC_099 HSPC_105 HSPC_111 HSPC_117 HSPC_123 LT-HSC_027 HSPC_087
#> "0211" "0211" "042" "022" "022" "042" "022" "023" "022"
#> HSPC_094 HSPC_100 HSPC_106 HSPC_112 HSPC_118 HSPC_124 LT-HSC_028 HSPC_088 HSPC_095
#> "01221" "032" "022" "0211" "031" "0211" "032" "032" "022"
#> HSPC_101 HSPC_107 HSPC_113 HSPC_119 HSPC_125 LT-HSC_029 HSPC_089 HSPC_096 HSPC_102
#> "0121" "042" "023" "023" "031" "0212" "032" "043" "0121"
#> HSPC_108 HSPC_114 HSPC_120 HSPC_126 LT-HSC_030 HSPC_090 Prog_091 Prog_097 Prog_103
#> "031" "032" "031" "032" "0212" "01221" "01111" "0121" "01221"
#> Prog_109 Prog_115 Prog_121 LT-HSC_031 Prog_085 Prog_092 Prog_098 Prog_104 Prog_110
#> "0412" "014" "0213" "032" "01222" "033" "0112" "0211" "01112"
#> Prog_116 Prog_122 LT-HSC_032 Prog_086 Prog_093 Prog_099 Prog_105 Prog_111 Prog_117
#> "01221" "033" "01111" "0212" "01223" "01222" "0121" "014" "0132"
#> Prog_123 LT-HSC_033 Prog_087 Prog_094 Prog_100 Prog_106 Prog_112 Prog_118 Prog_124
#> "0121" "031" "0121" "014" "0112" "031" "01112" "0412" "033"
#> LT-HSC_034 Prog_088 Prog_095 Prog_101 Prog_107 Prog_113 Prog_119 Prog_125 LT-HSC_035
#> "031" "043" "0112" "0131" "01112" "01223" "01111" "031" "0212"
#> Prog_089 Prog_096 Prog_102 Prog_108 Prog_114 Prog_120 Prog_126 LT-HSC_036 Prog_090
#> "014" "032" "031" "0411" "0413" "023" "014" "033" "0112"
#> HSPC_133 HSPC_139 HSPC_145 HSPC_151 HSPC_157 HSPC_163 LT-HSC_037 HSPC_127 HSPC_134
#> "022" "022" "023" "042" "043" "023" "023" "0412" "023"
#> HSPC_140 HSPC_146 HSPC_152 HSPC_158 HSPC_164 LT-HSC_038 HSPC_128 HSPC_135 HSPC_141
#> "023" "0412" "022" "042" "022" "023" "023" "031" "022"
#> HSPC_147 HSPC_153 HSPC_159 HSPC_165 LT-HSC_039 HSPC_129 HSPC_136 HSPC_142 HSPC_148
#> "023" "022" "042" "043" "022" "0211" "042" "042" "043"
#> HSPC_154 HSPC_160 HSPC_166 LT-HSC_040 HSPC_130 HSPC_137 HSPC_143 HSPC_149 HSPC_155
#> "043" "0211" "042" "022" "042" "0211" "022" "022" "023"
#> HSPC_161 HSPC_167 LT-HSC_041 HSPC_131 HSPC_138 HSPC_144 HSPC_150 HSPC_156 HSPC_162
#> "042" "023" "022" "022" "01221" "031" "0211" "01221" "032"
#> HSPC_168 LT-HSC_042 HSPC_132 Prog_133 Prog_139 Prog_145 Prog_151 Prog_157 Prog_163
#> "0413" "022" "0132" "0121" "0112" "0121" "032" "01222" "01113"
#> LT-HSC_043 Prog_127 Prog_134 Prog_140 Prog_146 Prog_152 Prog_158 Prog_164 LT-HSC_044
#> "0132" "032" "043" "01111" "01113" "043" "01112" "0213" "043"
#> Prog_128 Prog_135 Prog_141 Prog_147 Prog_153 Prog_159 Prog_165 LT-HSC_045 Prog_129
#> "0121" "032" "0132" "0211" "01222" "0412" "043" "0412" "0131"
#> Prog_136 Prog_142 Prog_148 Prog_154 Prog_160 Prog_166 LT-HSC_046 Prog_130 Prog_137
#> "0132" "033" "023" "033" "022" "014" "031" "0131" "01222"
#> Prog_143 Prog_149 Prog_155 Prog_161 Prog_167 LT-HSC_047 Prog_131 Prog_138 Prog_144
#> "0131" "0413" "0121" "033" "0121" "0213" "033" "0211" "043"
#> Prog_150 Prog_156 Prog_162 Prog_168 LT-HSC_048 Prog_132 HSPC_175 HSPC_181 HSPC_187
#> "0131" "0212" "0412" "0131" "023" "0131" "042" "022" "022"
#> HSPC_193 HSPC_199 HSPC_205 LT-HSC_049 HSPC_169 HSPC_176 HSPC_182 HSPC_188 HSPC_194
#> "033" "031" "022" "022" "042" "022" "023" "0211" "0211"
#> HSPC_200 HSPC_206 LT-HSC_050 HSPC_170 HSPC_177 HSPC_183 HSPC_189 HSPC_195 HSPC_201
#> "022" "01223" "022" "023" "022" "033" "031" "0121" "0211"
#> HSPC_207 LT-HSC_051 HSPC_171 HSPC_178 HSPC_184 HSPC_190 HSPC_196 HSPC_202 HSPC_208
#> "032" "022" "022" "031" "0212" "0413" "042" "032" "022"
#> LT-HSC_052 HSPC_172 HSPC_179 HSPC_185 HSPC_191 HSPC_197 HSPC_203 HSPC_209 LT-HSC_053
#> "01221" "01221" "01221" "023" "022" "0211" "042" "0211" "0211"
#> HSPC_173 HSPC_180 HSPC_186 HSPC_192 HSPC_198 HSPC_204 HSPC_210 LT-HSC_054 HSPC_174
#> "023" "043" "033" "022" "031" "0412" "043" "022" "031"
#> Prog_175 Prog_181 Prog_187 Prog_193 Prog_199 Prog_205 LT-HSC_055 Prog_169 Prog_176
#> "0411" "0211" "033" "042" "032" "0413" "0132" "0211" "01221"
#> Prog_182 Prog_188 Prog_194 Prog_200 Prog_206 LT-HSC_056 Prog_170 Prog_177 Prog_183
#> "043" "014" "023" "043" "01222" "0131" "01112" "042" "0132"
#> Prog_189 Prog_195 Prog_201 Prog_207 LT-HSC_057 Prog_171 Prog_178 Prog_184 Prog_190
#> "01222" "042" "0412" "014" "031" "042" "0112" "0131" "0121"
#> Prog_196 Prog_202 Prog_208 LT-HSC_058 Prog_172 Prog_179 Prog_185 Prog_191 Prog_197
#> "01111" "0213" "033" "032" "014" "0131" "01111" "033" "0131"
#> Prog_203 Prog_209 LT-HSC_059 Prog_173 Prog_180 Prog_186 Prog_192 Prog_198 Prog_204
#> "0132" "0131" "0212" "043" "032" "01223" "0121" "0211" "023"
#> Prog_210 LT-HSC_060 Prog_174 HSPC_217 HSPC_223 HSPC_229 HSPC_235 HSPC_241 HSPC_247
#> "032" "0131" "0213" "0212" "022" "023" "022" "0211" "023"
#> LT-HSC_061 HSPC_211 HSPC_218 HSPC_224 HSPC_230 HSPC_236 HSPC_242 HSPC_248 LT-HSC_062
#> "0212" "042" "022" "022" "042" "043" "023" "022" "023"
#> HSPC_212 HSPC_219 HSPC_225 HSPC_231 HSPC_237 HSPC_243 HSPC_249 LT-HSC_063 HSPC_213
#> "023" "042" "022" "023" "022" "0412" "022" "033" "0413"
#> HSPC_220 HSPC_226 HSPC_232 HSPC_238 HSPC_244 HSPC_250 LT-HSC_064 HSPC_214 HSPC_221
#> "022" "0211" "023" "0212" "032" "0413" "0112" "0121" "031"
#> HSPC_227 HSPC_233 HSPC_239 HSPC_245 HSPC_251 LT-HSC_065 HSPC_215 HSPC_222 HSPC_228
#> "022" "042" "022" "022" "0413" "031" "0412" "042" "023"
#> HSPC_234 HSPC_240 HSPC_246 HSPC_252 LT-HSC_066 HSPC_216 Prog_217 Prog_223 Prog_229
#> "0211" "031" "022" "0213" "031" "0121" "01111" "042" "01112"
#> Prog_235 Prog_241 Prog_247 LT-HSC_067 Prog_211 Prog_218 Prog_224 Prog_230 Prog_236
#> "023" "022" "033" "0213" "0112" "01222" "0132" "0413" "0121"
#> Prog_242 Prog_248 LT-HSC_068 Prog_212 Prog_219 Prog_225 Prog_231 Prog_237 Prog_243
#> "014" "043" "01221" "014" "0213" "033" "0132" "042" "0131"
#> Prog_249 LT-HSC_069 Prog_213 Prog_220 Prog_226 Prog_232 Prog_238 Prog_244 Prog_250
#> "01111" "032" "043" "0213" "031" "033" "0121" "032" "014"
#> LT-HSC_070 Prog_214 Prog_221 Prog_227 Prog_233 Prog_239 Prog_245 Prog_251 LT-HSC_071
#> "043" "0413" "01111" "0132" "01222" "01111" "0121" "0212" "032"
#> Prog_215 Prog_222 Prog_228 Prog_234 Prog_240 Prog_246 Prog_252 LT-HSC_072 Prog_216
#> "01113" "032" "0131" "0121" "01221" "033" "032" "0121" "01113"
#> HSPC_259 HSPC_265 HSPC_271 HSPC_277 HSPC_283 HSPC_289 LT-HSC_073 HSPC_253 HSPC_260
#> "023" "022" "0412" "023" "022" "022" "023" "0413" "0211"
#> HSPC_266 HSPC_272 HSPC_278 HSPC_284 HSPC_290 LT-HSC_074 HSPC_254 HSPC_261 HSPC_267
#> "022" "0211" "042" "0211" "0413" "022" "022" "0132" "031"
#> HSPC_273 HSPC_279 HSPC_285 HSPC_291 LT-HSC_075 HSPC_255 HSPC_262 HSPC_268 HSPC_274
#> "0211" "043" "0121" "033" "031" "032" "0212" "0121" "022"
#> HSPC_280 HSPC_286 HSPC_292 LT-HSC_076 HSPC_256 HSPC_263 HSPC_269 HSPC_275 HSPC_281
#> "0412" "042" "0412" "042" "0112" "0412" "0132" "0131" "023"
#> HSPC_287 HSPC_293 LT-HSC_077 HSPC_257 HSPC_264 HSPC_270 HSPC_276 HSPC_282 HSPC_288
#> "0413" "0412" "023" "0413" "022" "032" "032" "0121" "0121"
#> HSPC_294 LT-HSC_078 HSPC_258 Prog_259 Prog_265 Prog_271 Prog_277 Prog_283 Prog_289
#> "0413" "022" "01222" "031" "0112" "033" "031" "042" "0412"
#> LT-HSC_079 Prog_253 Prog_260 Prog_266 Prog_272 Prog_278 Prog_284 Prog_290 LT-HSC_080
#> "0211" "014" "01223" "01221" "01223" "0112" "014" "0112" "032"
#> Prog_254 Prog_261 Prog_267 Prog_273 Prog_279 Prog_285 Prog_291 LT-HSC_081 Prog_255
#> "0112" "014" "0131" "0131" "01112" "014" "0411" "01221" "0121"
#> Prog_262 Prog_268 Prog_274 Prog_280 Prog_286 Prog_292 LT-HSC_082 Prog_256 Prog_263
#> "01223" "01223" "014" "033" "0112" "01222" "032" "042" "0131"
#> Prog_269 Prog_275 Prog_281 Prog_287 Prog_293 LT-HSC_083 Prog_257 Prog_264 Prog_270
#> "0112" "01223" "014" "0131" "033" "0212" "0213" "023" "0131"
#> Prog_276 Prog_282 Prog_288 Prog_294 LT-HSC_084 Prog_258 HSPC_301 HSPC_307 HSPC_313
#> "0121" "01113" "0112" "01222" "033" "0132" "023" "022" "042"
#> HSPC_319 HSPC_325 HSPC_331 LT-HSC_085 HSPC_295 HSPC_302 HSPC_308 HSPC_314 HSPC_320
#> "0212" "022" "022" "022" "0413" "023" "043" "042" "043"
#> HSPC_326 HSPC_332 LT-HSC_086 HSPC_296 HSPC_303 HSPC_309 HSPC_315 HSPC_321 HSPC_327
#> "022" "0121" "042" "022" "01221" "022" "022" "042" "0121"
#> HSPC_333 LT-HSC_087 HSPC_297 HSPC_304 HSPC_310 HSPC_316 HSPC_322 HSPC_328 HSPC_334
#> "0121" "0212" "022" "032" "022" "023" "031" "042" "022"
#> LT-HSC_088 HSPC_298 HSPC_305 HSPC_311 HSPC_317 HSPC_323 HSPC_329 HSPC_335 LT-HSC_089
#> "043" "032" "0412" "0212" "023" "031" "042" "022" "022"
#> HSPC_299 HSPC_306 HSPC_312 HSPC_318 HSPC_324 HSPC_330 HSPC_336 LT-HSC_090 HSPC_300
#> "033" "033" "0413" "022" "031" "031" "022" "032" "01221"
#> Prog_301 Prog_307 Prog_313 Prog_319 Prog_325 Prog_331 LT-HSC_091 Prog_295 Prog_302
#> "0411" "0412" "0413" "0132" "0121" "0121" "01111" "0412" "0212"
#> Prog_308 Prog_314 Prog_320 Prog_326 Prog_332 LT-HSC_092 Prog_296 Prog_303 Prog_309
#> "01223" "033" "01221" "01111" "01222" "0212" "01222" "022" "022"
#> Prog_315 Prog_321 Prog_327 Prog_333 LT-HSC_093 Prog_297 Prog_304 Prog_310 Prog_316
#> "0411" "0411" "0121" "043" "042" "043" "0121" "0412" "0411"
#> Prog_322 Prog_328 Prog_334 LT-HSC_094 Prog_298 Prog_305 Prog_311 Prog_317 Prog_323
#> "043" "0411" "014" "042" "014" "0413" "043" "0212" "0411"
#> Prog_329 Prog_335 LT-HSC_095 Prog_299 Prog_306 Prog_312 Prog_318 Prog_324 Prog_330
#> "0411" "0413" "01112" "0112" "022" "01111" "01111" "0112" "0132"
#> Prog_336 LT-HSC_096 Prog_300 HSPC_343 HSPC_349 HSPC_355 HSPC_361 HSPC_367 HSPC_373
#> "0132" "0121" "0131" "0132" "031" "0213" "023" "022" "023"
#> LT-HSC_097 HSPC_337 HSPC_344 HSPC_350 HSPC_356 HSPC_362 HSPC_368 HSPC_374 LT-HSC_098
#> "0212" "022" "0412" "022" "043" "0411" "042" "032" "0112"
#> HSPC_338 HSPC_345 HSPC_351 HSPC_357 HSPC_363 HSPC_369 HSPC_375 LT-HSC_099 HSPC_339
#> "01112" "043" "043" "0211" "022" "0211" "0211" "023" "032"
#> HSPC_346 HSPC_352 HSPC_358 HSPC_364 HSPC_370 HSPC_376 LT-HSC_100 HSPC_340 HSPC_347
#> "0121" "0412" "042" "042" "0131" "042" "01112" "0213" "0211"
#> HSPC_353 HSPC_359 HSPC_365 HSPC_371 HSPC_377 LT-HSC_101 HSPC_341 HSPC_348 HSPC_354
#> "0121" "032" "023" "0121" "0413" "0411" "01221" "033" "022"
#> HSPC_360 HSPC_366 HSPC_372 HSPC_378 LT-HSC_102 HSPC_342 Prog_343 Prog_349 Prog_355
#> "042" "0213" "042" "0212" "01112" "0131" "0132" "0411" "0413"
#> Prog_361 Prog_367 Prog_373 LT-HSC_103 Prog_337 Prog_344 Prog_350 Prog_356 Prog_362
#> "014" "0131" "01113" "0132" "01111" "0211" "014" "0112" "0412"
#> Prog_368 Prog_374 LT-HSC_104 Prog_338 Prog_345 Prog_351 Prog_357 Prog_363 Prog_369
#> "014" "014" "0212" "01221" "0411" "014" "01112" "014" "0411"
#> Prog_375 LT-HSC_105 Prog_339 Prog_346 Prog_352 Prog_358 Prog_364 Prog_370 Prog_376
#> "01112" "0411" "0112" "014" "01112" "031" "0112" "0411" "0112"
#> LT-HSC_106 Prog_340 Prog_347 Prog_353 Prog_359 Prog_365 Prog_371 Prog_377 LT-HSC_107
#> "0412" "014" "0213" "0132" "0112" "0213" "0121" "01111" "023"
#> Prog_341 Prog_348 Prog_354 Prog_360 Prog_366 Prog_372 Prog_378 LT-HSC_108 Prog_342
#> "0121" "0212" "0412" "01112" "014" "0112" "032" "0121" "01112"
#> HSPC_385 HSPC_391 HSPC_397 HSPC_403 HSPC_409 HSPC_415 HSPC_421 HSPC_379 HSPC_386
#> "0211" "031" "0211" "042" "023" "023" "043" "0212" "042"
#> HSPC_392 HSPC_398 HSPC_404 HSPC_410 HSPC_416 HSPC_422 HSPC_380 HSPC_387 HSPC_393
#> "032" "032" "0112" "0121" "031" "032" "032" "0412" "0411"
#> HSPC_399 HSPC_405 HSPC_411 HSPC_417 HSPC_423 HSPC_381 HSPC_388 HSPC_394 HSPC_400
#> "031" "032" "0121" "01221" "01221" "0211" "01221" "0211" "0412"
#> HSPC_406 HSPC_412 HSPC_418 HSPC_424 HSPC_382 HSPC_389 HSPC_395 HSPC_401 HSPC_407
#> "042" "0131" "031" "0413" "01221" "014" "043" "0211" "0131"
#> HSPC_413 HSPC_419 HSPC_425 HSPC_383 HSPC_390 HSPC_396 HSPC_402 HSPC_408 HSPC_414
#> "042" "0131" "0413" "022" "042" "032" "032" "01111" "0211"
#> HSPC_420 HSPC_426 HSPC_384 Prog_385 Prog_391 Prog_397 Prog_403 Prog_409 Prog_415
#> "01221" "042" "0211" "01111" "0213" "01112" "0112" "01112" "01112"
#> Prog_421 Prog_379 Prog_386 Prog_392 Prog_398 Prog_404 Prog_410 Prog_416 Prog_422
#> "01112" "0112" "01112" "01222" "01112" "01113" "0112" "0112" "0413"
#> Prog_380 Prog_387 Prog_393 Prog_399 Prog_405 Prog_411 Prog_417 Prog_423 Prog_381
#> "0112" "0131" "0112" "01223" "01223" "042" "0411" "0412" "0112"
#> Prog_388 Prog_394 Prog_400 Prog_406 Prog_412 Prog_418 Prog_424 Prog_382 Prog_389
#> "01112" "033" "0211" "0112" "0121" "014" "0112" "031" "0132"
#> Prog_395 Prog_401 Prog_407 Prog_413 Prog_419 Prog_425 Prog_383 Prog_390 Prog_396
#> "01112" "0132" "033" "0121" "01112" "014" "01111" "043" "014"
#> Prog_402 Prog_408 Prog_414 Prog_420 Prog_426 Prog_384 HSPC_433 HSPC_439 HSPC_445
#> "0412" "014" "0131" "0121" "0121" "0411" "0212" "0212" "0212"
#> HSPC_451 HSPC_457 HSPC_463 LT-HSC_109 HSPC_427 HSPC_434 HSPC_440 HSPC_446 HSPC_452
#> "023" "022" "032" "022" "023" "0213" "042" "022" "0211"
#> HSPC_458 HSPC_464 LT-HSC_110 HSPC_428 HSPC_435 HSPC_441 HSPC_447 HSPC_453 HSPC_459
#> "0211" "0211" "031" "0212" "031" "031" "033" "032" "031"
#> HSPC_465 LT-HSC_111 HSPC_429 HSPC_436 HSPC_442 HSPC_448 HSPC_454 HSPC_460 HSPC_466
#> "031" "022" "0211" "0132" "01221" "031" "0132" "031" "042"
#> LT-HSC_112 HSPC_430 HSPC_437 HSPC_443 HSPC_449 HSPC_455 HSPC_461 HSPC_467 LT-HSC_113
#> "032" "031" "0211" "031" "031" "022" "042" "031" "032"
#> HSPC_431 HSPC_438 HSPC_444 HSPC_450 HSPC_456 HSPC_462 HSPC_468 LT-HSC_114 HSPC_432
#> "031" "0213" "022" "022" "01221" "031" "031" "023" "022"
#> Prog_433 Prog_439 Prog_445 Prog_451 Prog_457 Prog_463 LT-HSC_115 Prog_427 Prog_434
#> "031" "033" "032" "0131" "014" "033" "01221" "022" "01111"
#> Prog_440 Prog_446 Prog_452 Prog_458 Prog_464 LT-HSC_116 Prog_428 Prog_435 Prog_441
#> "043" "032" "0212" "043" "032" "031" "01221" "0411" "0121"
#> Prog_447 Prog_453 Prog_459 Prog_465 LT-HSC_117 Prog_429 Prog_436 Prog_442 Prog_448
#> "01223" "014" "033" "043" "031" "01111" "01221" "0211" "033"
#> Prog_454 Prog_460 Prog_466 LT-HSC_118 Prog_430 Prog_437 Prog_443 Prog_449 Prog_455
#> "0412" "042" "0411" "0211" "0112" "0132" "0131" "01111" "031"
#> Prog_461 Prog_467 LT-HSC_119 Prog_431 Prog_438 Prog_444 Prog_450 Prog_456 Prog_462
#> "022" "033" "0213" "033" "022" "01111" "01222" "01223" "042"
#> Prog_468 LT-HSC_120 Prog_432 HSPC_475 HSPC_481 HSPC_487 HSPC_493 HSPC_499 HSPC_505
#> "0411" "0413" "043" "022" "023" "0212" "022" "022" "042"
#> LT-HSC_121 HSPC_469 HSPC_476 HSPC_482 HSPC_488 HSPC_494 HSPC_500 HSPC_506 LT-HSC_122
#> "0213" "023" "0211" "022" "022" "022" "022" "022" "042"
#> HSPC_470 HSPC_477 HSPC_483 HSPC_489 HSPC_495 HSPC_501 HSPC_507 LT-HSC_123 HSPC_471
#> "022" "01221" "022" "042" "043" "023" "022" "022" "022"
#> HSPC_478 HSPC_484 HSPC_490 HSPC_496 HSPC_502 HSPC_508 LT-HSC_124 HSPC_472 HSPC_479
#> "022" "0211" "031" "031" "032" "0131" "031" "032" "031"
#> HSPC_485 HSPC_491 HSPC_497 HSPC_503 HSPC_509 LT-HSC_125 HSPC_473 HSPC_480 HSPC_486
#> "0121" "0412" "022" "0121" "042" "031" "031" "032" "042"
#> HSPC_492 HSPC_498 HSPC_504 HSPC_510 LT-HSC_126 HSPC_474 Prog_475 Prog_481 Prog_487
#> "032" "031" "022" "0412" "032" "032" "0131" "033" "0131"
#> Prog_493 Prog_499 Prog_505 LT-HSC_127 Prog_469 Prog_476 Prog_482 Prog_488 Prog_494
#> "01222" "0121" "0131" "0212" "042" "0121" "01222" "0131" "043"
#> Prog_500 Prog_506 LT-HSC_128 Prog_470 Prog_477 Prog_483 Prog_489 Prog_495 Prog_501
#> "0131" "0121" "031" "0121" "0112" "043" "0121" "032" "01223"
#> Prog_507 LT-HSC_129 Prog_471 Prog_478 Prog_484 Prog_490 Prog_496 Prog_502 Prog_508
#> "0411" "0211" "01222" "01113" "01223" "043" "033" "0112" "01113"
#> LT-HSC_130 Prog_472 Prog_479 Prog_485 Prog_491 Prog_497 Prog_503 Prog_509 LT-HSC_131
#> "0132" "043" "01222" "0132" "0131" "0411" "043" "031" "031"
#> Prog_473 Prog_480 Prog_486 Prog_492 Prog_498 Prog_504 Prog_510 LT-HSC_132 Prog_474
#> "01223" "023" "0121" "031" "0213" "0121" "042" "014" "032"
#> HSPC_517 HSPC_523 HSPC_529 HSPC_535 HSPC_541 HSPC_547 LT-HSC_133 HSPC_511 HSPC_518
#> "023" "032" "0211" "022" "022" "032" "0212" "023" "022"
#> HSPC_524 HSPC_530 HSPC_536 HSPC_542 HSPC_548 LT-HSC_134 HSPC_512 HSPC_519 HSPC_525
#> "022" "022" "0211" "0211" "022" "023" "032" "0211" "023"
#> HSPC_531 HSPC_537 HSPC_543 HSPC_549 LT-HSC_135 HSPC_513 HSPC_520 HSPC_526 HSPC_532
#> "022" "042" "042" "022" "022" "0212" "042" "031" "042"
#> HSPC_538 HSPC_544 HSPC_550 LT-HSC_136 HSPC_514 HSPC_521 HSPC_527 HSPC_533 HSPC_539
#> "031" "0121" "042" "023" "031" "022" "01221" "032" "022"
#> HSPC_545 HSPC_551 LT-HSC_137 HSPC_515 HSPC_522 HSPC_528 HSPC_534 HSPC_540 HSPC_546
#> "022" "042" "022" "031" "022" "0413" "031" "032" "022"
#> HSPC_552 LT-HSC_138 HSPC_516 Prog_517 Prog_523 Prog_529 Prog_535 Prog_541 Prog_547
#> "042" "022" "032" "033" "0112" "0131" "0112" "0131" "0132"
#> LT-HSC_139 Prog_511 Prog_518 Prog_524 Prog_530 Prog_536 Prog_542 Prog_548 LT-HSC_140
#> "031" "031" "0413" "042" "0121" "0112" "0413" "0112" "022"
#> Prog_512 Prog_519 Prog_525 Prog_531 Prog_537 Prog_543 Prog_549 LT-HSC_141 Prog_513
#> "0411" "042" "043" "0131" "022" "014" "0413" "0211" "033"
#> Prog_520 Prog_526 Prog_532 Prog_538 Prog_544 Prog_550 LT-HSC_142 Prog_514 Prog_521
#> "0131" "023" "022" "0212" "023" "0121" "0121" "01223" "0121"
#> Prog_527 Prog_533 Prog_539 Prog_545 Prog_551 LT-HSC_143 Prog_515 Prog_522 Prog_528
#> "0121" "022" "0411" "014" "0121" "0132" "043" "022" "014"
#> Prog_534 Prog_540 Prog_546 Prog_552 LT-HSC_144 Prog_516 HSPC_559 HSPC_565 HSPC_571
#> "043" "023" "023" "0412" "042" "01111" "022" "023" "031"
#> HSPC_577 HSPC_583 HSPC_589 LT-HSC_145 HSPC_553 HSPC_560 HSPC_566 HSPC_572 HSPC_578
#> "022" "0211" "022" "022" "0131" "022" "022" "023" "022"
#> HSPC_584 HSPC_590 LT-HSC_146 HSPC_554 HSPC_561 HSPC_567 HSPC_573 HSPC_579 HSPC_585
#> "022" "042" "031" "022" "0211" "031" "022" "031" "022"
#> HSPC_591 LT-HSC_147 HSPC_555 HSPC_562 HSPC_568 HSPC_574 HSPC_580 HSPC_586 HSPC_592
#> "023" "022" "022" "023" "022" "0121" "032" "032" "031"
#> LT-HSC_148 HSPC_556 HSPC_563 HSPC_569 HSPC_575 HSPC_581 HSPC_587 HSPC_593 LT-HSC_149
#> "042" "032" "031" "0413" "031" "0211" "0211" "022" "022"
#> HSPC_557 HSPC_564 HSPC_570 HSPC_576 HSPC_582 HSPC_588 HSPC_594 LT-HSC_150 HSPC_558
#> "032" "0211" "0211" "022" "022" "0212" "022" "022" "0211"
#> Prog_559 Prog_565 Prog_571 Prog_577 Prog_583 Prog_589 LT-HSC_151 Prog_553 Prog_560
#> "01222" "0121" "01223" "0121" "023" "023" "032" "043" "0121"
#> Prog_566 Prog_572 Prog_578 Prog_584 Prog_590 LT-HSC_152 Prog_554 Prog_561 Prog_567
#> "014" "032" "0413" "0121" "01221" "022" "031" "042" "0121"
#> Prog_573 Prog_579 Prog_585 Prog_591 LT-HSC_153 Prog_555 Prog_562 Prog_568 Prog_574
#> "023" "01223" "033" "023" "022" "031" "0112" "033" "0121"
#> Prog_580 Prog_586 Prog_592 LT-HSC_154 Prog_556 Prog_563 Prog_569 Prog_575 Prog_581
#> "031" "043" "01111" "0211" "033" "0213" "0131" "01113" "01222"
#> Prog_587 Prog_593 LT-HSC_155 Prog_557 Prog_564 Prog_570 Prog_576 Prog_582 Prog_588
#> "0132" "01222" "0211" "01222" "031" "0411" "014" "01223" "031"
#> Prog_594 LT-HSC_156 Prog_558 HSPC_601 HSPC_607 HSPC_613 HSPC_619 HSPC_625 HSPC_631
#> "033" "01222" "031" "042" "023" "042" "0211" "022" "0412"
#> LT-HSC_157 HSPC_595 HSPC_602 HSPC_608 HSPC_614 HSPC_620 HSPC_626 HSPC_632 LT-HSC_158
#> "023" "031" "022" "022" "042" "022" "023" "0211" "022"
#> HSPC_596 HSPC_603 HSPC_609 HSPC_615 HSPC_621 HSPC_627 HSPC_633 LT-HSC_159 HSPC_597
#> "042" "032" "023" "023" "0211" "042" "023" "0411" "042"
#> HSPC_604 HSPC_610 HSPC_616 HSPC_622 HSPC_628 HSPC_634 LT-HSC_160 HSPC_598 HSPC_605
#> "022" "022" "0211" "0211" "042" "042" "023" "042" "0213"
#> HSPC_611 HSPC_617 HSPC_623 HSPC_629 HSPC_635 LT-HSC_161 HSPC_599 HSPC_606 HSPC_612
#> "0211" "032" "042" "042" "042" "023" "022" "031" "031"
#> HSPC_618 HSPC_624 HSPC_630 HSPC_636 LT-HSC_162 HSPC_600 Prog_601 Prog_607 Prog_613
#> "022" "032" "022" "031" "023" "023" "0211" "0121" "033"
#> Prog_619 Prog_625 Prog_631 LT-HSC_163 Prog_595 Prog_602 Prog_608 Prog_614 Prog_620
#> "022" "0413" "032" "022" "022" "0132" "0112" "0132" "042"
#> Prog_626 Prog_632 LT-HSC_164 Prog_596 Prog_603 Prog_609 Prog_615 Prog_621 Prog_627
#> "0121" "01222" "031" "033" "0112" "0121" "0411" "0121" "031"
#> Prog_633 LT-HSC_165 Prog_597 Prog_604 Prog_610 Prog_616 Prog_622 Prog_628 Prog_634
#> "043" "022" "033" "033" "033" "01112" "0121" "0121" "043"
#> LT-HSC_166 Prog_598 Prog_605 Prog_611 Prog_617 Prog_623 Prog_629 Prog_635 LT-HSC_167
#> "042" "0121" "014" "033" "031" "0132" "01221" "033" "022"
#> Prog_599 Prog_606 Prog_612 Prog_618 Prog_624 Prog_630 Prog_636 LT-HSC_168 Prog_600
#> "01222" "031" "0131" "01222" "01222" "0131" "0213" "0131" "01222"
#> HSPC_643 HSPC_649 HSPC_655 HSPC_661 HSPC_667 HSPC_673 LT-HSC_169 HSPC_637 HSPC_644
#> "042" "032" "0212" "042" "022" "022" "023" "031" "0132"
#> HSPC_650 HSPC_656 HSPC_662 HSPC_668 HSPC_674 LT-HSC_170 HSPC_638 HSPC_645 HSPC_651
#> "0211" "022" "022" "032" "031" "042" "0132" "032" "0411"
#> HSPC_657 HSPC_663 HSPC_669 HSPC_675 LT-HSC_171 HSPC_639 HSPC_646 HSPC_652 HSPC_658
#> "023" "0412" "022" "0212" "042" "031" "031" "042" "0412"
#> HSPC_664 HSPC_670 HSPC_676 LT-HSC_172 HSPC_640 HSPC_647 HSPC_653 HSPC_659 HSPC_665
#> "032" "023" "022" "022" "031" "022" "0211" "0211" "042"
#> HSPC_671 HSPC_677 LT-HSC_173 HSPC_641 HSPC_648 HSPC_654 HSPC_660 HSPC_666 HSPC_672
#> "032" "023" "022" "031" "022" "042" "043" "0413" "032"
#> HSPC_678 LT-HSC_174 HSPC_642 Prog_643 Prog_649 Prog_655 Prog_661 Prog_667 Prog_673
#> "022" "031" "0211" "0412" "0112" "0112" "0131" "043" "042"
#> LT-HSC_175 Prog_637 Prog_644 Prog_650 Prog_656 Prog_662 Prog_668 Prog_674 LT-HSC_176
#> "0211" "014" "033" "0121" "033" "033" "023" "033" "022"
#> Prog_638 Prog_645 Prog_651 Prog_657 Prog_663 Prog_669 Prog_675 LT-HSC_177 Prog_639
#> "0112" "043" "031" "01112" "0112" "023" "01223" "022" "014"
#> Prog_646 Prog_652 Prog_658 Prog_664 Prog_670 Prog_676 LT-HSC_178 Prog_640 Prog_647
#> "01223" "01222" "0121" "023" "0121" "033" "0211" "01113" "043"
#> Prog_653 Prog_659 Prog_665 Prog_671 Prog_677 LT-HSC_179 Prog_641 Prog_648 Prog_654
#> "043" "033" "031" "031" "0112" "031" "023" "042" "0132"
#> Prog_660 Prog_666 Prog_672 Prog_678 LT-HSC_180 Prog_642 HSPC_685 HSPC_691 HSPC_697
#> "031" "033" "031" "0411" "043" "032" "0213" "0212" "0413"
#> HSPC_703 HSPC_709 HSPC_715 LT-HSC_181 HSPC_679 HSPC_686 HSPC_692 HSPC_698 HSPC_704
#> "022" "023" "0212" "0212" "031" "0211" "023" "022" "022"
#> HSPC_710 HSPC_716 LT-HSC_182 HSPC_680 HSPC_687 HSPC_693 HSPC_699 HSPC_705 HSPC_711
#> "0211" "022" "0213" "022" "023" "023" "022" "0121" "0211"
#> HSPC_717 LT-HSC_183 HSPC_681 HSPC_688 HSPC_694 HSPC_700 HSPC_706 HSPC_712 HSPC_718
#> "0412" "031" "042" "0211" "0211" "0413" "033" "0211" "0211"
#> LT-HSC_184 HSPC_682 HSPC_689 HSPC_695 HSPC_701 HSPC_707 HSPC_713 HSPC_719 LT-HSC_185
#> "031" "0121" "022" "0132" "042" "042" "0212" "022" "023"
#> HSPC_683 HSPC_690 HSPC_696 HSPC_702 HSPC_708 HSPC_714 HSPC_720 LT-HSC_186 HSPC_684
#> "0412" "022" "043" "022" "031" "022" "0121" "0211" "023"
#> Prog_685 Prog_691 Prog_697 Prog_703 Prog_709 Prog_715 LT-HSC_187 Prog_679 Prog_686
#> "0121" "0213" "0112" "043" "014" "0121" "031" "01223" "0413"
#> Prog_692 Prog_698 Prog_704 Prog_710 Prog_716 LT-HSC_188 Prog_680 Prog_687 Prog_693
#> "032" "0131" "031" "031" "033" "031" "01221" "0121" "01221"
#> Prog_699 Prog_705 Prog_711 Prog_717 LT-HSC_189 Prog_681 Prog_688 Prog_694 Prog_700
#> "0121" "0121" "033" "0121" "0211" "0131" "0112" "033" "01112"
#> Prog_706 Prog_712 Prog_718 LT-HSC_190 Prog_682 Prog_689 Prog_695 Prog_701 Prog_707
#> "0131" "0132" "01222" "023" "0132" "033" "01111" "01112" "033"
#> Prog_713 Prog_719 LT-HSC_191 Prog_683 Prog_690 Prog_696 Prog_702 Prog_708 Prog_714
#> "0131" "0112" "031" "023" "033" "0411" "014" "014" "014"
#> Prog_720 LT-HSC_192 Prog_684 HSPC_727 HSPC_733 HSPC_739 HSPC_745 HSPC_751 HSPC_757
#> "014" "01221" "032" "022" "022" "023" "023" "022" "022"
#> LT-HSC_193 HSPC_721 HSPC_728 HSPC_734 HSPC_740 HSPC_746 HSPC_752 HSPC_758 LT-HSC_194
#> "022" "023" "0213" "0121" "022" "023" "023" "032" "022"
#> HSPC_722 HSPC_729 HSPC_735 HSPC_741 HSPC_747 HSPC_753 HSPC_759 LT-HSC_195 HSPC_723
#> "031" "031" "042" "0211" "022" "031" "032" "032" "032"
#> HSPC_730 HSPC_736 HSPC_742 HSPC_748 HSPC_754 HSPC_760 LT-HSC_196 HSPC_724 HSPC_731
#> "031" "032" "032" "022" "0213" "042" "0211" "032" "0412"
#> HSPC_737 HSPC_743 HSPC_749 HSPC_755 HSPC_761 LT-HSC_197 HSPC_725 HSPC_732 HSPC_738
#> "0121" "031" "022" "031" "032" "022" "023" "032" "022"
#> HSPC_744 HSPC_750 HSPC_756 HSPC_762 LT-HSC_198 HSPC_726 Prog_727 Prog_733 Prog_739
#> "042" "031" "022" "042" "022" "0213" "0121" "033" "0412"
#> Prog_745 Prog_751 Prog_757 LT-HSC_199 Prog_721 Prog_728 Prog_734 Prog_740 Prog_746
#> "033" "033" "0412" "0211" "014" "032" "014" "033" "0411"
#> Prog_752 Prog_758 LT-HSC_200 Prog_722 Prog_729 Prog_735 Prog_741 Prog_747 Prog_753
#> "033" "033" "022" "014" "023" "0121" "0213" "033" "0131"
#> Prog_759 LT-HSC_201 Prog_723 Prog_730 Prog_736 Prog_742 Prog_748 Prog_754 Prog_760
#> "0121" "022" "0112" "0112" "0131" "0213" "0413" "0131" "01222"
#> LT-HSC_202 Prog_724 Prog_731 Prog_737 Prog_743 Prog_749 Prog_755 Prog_761 LT-HSC_203
#> "031" "033" "0112" "031" "0121" "043" "0213" "0412" "0213"
#> Prog_725 Prog_732 Prog_738 Prog_744 Prog_750 Prog_756 Prog_762 LT-HSC_204 Prog_726
#> "031" "043" "033" "033" "0413" "043" "031" "032" "031"
#> HSPC_769 HSPC_775 HSPC_781 HSPC_787 HSPC_793 HSPC_799 LT-HSC_205 HSPC_763 HSPC_770
#> "023" "023" "022" "023" "0212" "023" "023" "0212" "042"
#> HSPC_776 HSPC_782 HSPC_788 HSPC_794 HSPC_800 LT-HSC_206 HSPC_764 HSPC_771 HSPC_777
#> "023" "022" "023" "032" "0413" "022" "022" "032" "032"
#> HSPC_783 HSPC_789 HSPC_795 HSPC_801 LT-HSC_207 HSPC_765 HSPC_772 HSPC_778 HSPC_784
#> "022" "042" "032" "031" "042" "023" "042" "031" "031"
#> HSPC_790 HSPC_796 HSPC_802 LT-HSC_208 HSPC_766 HSPC_773 HSPC_779 HSPC_785 HSPC_791
#> "042" "0121" "022" "022" "01221" "032" "042" "031" "043"
#> HSPC_797 HSPC_803 LT-HSC_209 HSPC_767 HSPC_774 HSPC_780 HSPC_786 HSPC_792 HSPC_798
#> "032" "022" "0211" "01221" "032" "031" "031" "0213" "022"
#> HSPC_804 LT-HSC_210 HSPC_768 Prog_769 Prog_775 Prog_781 Prog_787 Prog_793 Prog_799
#> "022" "022" "023" "01223" "033" "01223" "043" "0132" "033"
#> LT-HSC_211 Prog_763 Prog_770 Prog_776 Prog_782 Prog_788 Prog_794 Prog_800 LT-HSC_212
#> "042" "01221" "014" "0112" "01221" "0112" "01222" "01223" "031"
#> Prog_764 Prog_771 Prog_777 Prog_783 Prog_789 Prog_795 Prog_801 LT-HSC_213 Prog_765
#> "01223" "014" "0121" "014" "0121" "0121" "0132" "022" "0131"
#> Prog_772 Prog_778 Prog_784 Prog_790 Prog_796 Prog_802 LT-HSC_214 Prog_766 Prog_773
#> "01223" "023" "032" "0112" "0412" "014" "031" "0212" "0212"
#> Prog_779 Prog_785 Prog_791 Prog_797 Prog_803 LT-HSC_215 Prog_767 Prog_774 Prog_780
#> "0131" "033" "0121" "031" "043" "032" "01113" "0121" "01113"
#> Prog_786 Prog_792 Prog_798 Prog_804 LT-HSC_216 Prog_768 HSPC_811 HSPC_817 HSPC_823
#> "01113" "0131" "0131" "0121" "0411" "01221" "0212" "0212" "0212"
#> HSPC_829 HSPC_835 HSPC_841 HSPC_847 HSPC_805 HSPC_812 HSPC_818 HSPC_824 HSPC_830
#> "0213" "032" "043" "023" "0212" "01221" "031" "031" "0212"
#> HSPC_836 HSPC_842 HSPC_848 HSPC_806 HSPC_813 HSPC_819 HSPC_825 HSPC_831 HSPC_837
#> "023" "023" "022" "023" "01221" "042" "031" "031" "0412"
#> HSPC_843 HSPC_849 HSPC_807 HSPC_814 HSPC_820 HSPC_826 HSPC_832 HSPC_838 HSPC_844
#> "031" "022" "0121" "0413" "01221" "031" "032" "032" "022"
#> HSPC_850 HSPC_808 HSPC_815 HSPC_821 HSPC_827 HSPC_833 HSPC_839 HSPC_845 HSPC_851
#> "0211" "01221" "032" "042" "022" "01221" "0413" "031" "023"
#> HSPC_809 HSPC_816 HSPC_822 HSPC_828 HSPC_834 HSPC_840 HSPC_846 HSPC_852 HSPC_810
#> "022" "042" "031" "032" "032" "022" "042" "022" "022"
#> Prog_811 Prog_817 Prog_823 Prog_829 Prog_835 Prog_841 Prog_847 Prog_805 Prog_812
#> "014" "0132" "031" "0121" "014" "0411" "01223" "042" "023"
#> Prog_818 Prog_824 Prog_830 Prog_836 Prog_842 Prog_848 Prog_806 Prog_813 Prog_819
#> "014" "01223" "0112" "0131" "014" "022" "033" "0112" "0112"
#> Prog_825 Prog_831 Prog_837 Prog_843 Prog_849 Prog_807 Prog_814 Prog_820 Prog_826
#> "01113" "014" "014" "0131" "042" "014" "0112" "0132" "0112"
#> Prog_832 Prog_838 Prog_844 Prog_850 Prog_808 Prog_815 Prog_821 Prog_827 Prog_833
#> "0121" "0112" "014" "014" "0121" "014" "01113" "033" "01221"
#> Prog_839 Prog_845 Prog_851 Prog_809 Prog_816 Prog_822 Prog_828 Prog_834 Prog_840
#> "0131" "0131" "033" "0132" "01223" "01113" "01113" "0121" "0121"
#> Prog_846 Prog_852 Prog_810
#> "0121" "0411" "0131"
get_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 1413))
#> HSPC_007 HSPC_013 HSPC_019 HSPC_025 HSPC_031 HSPC_037 LT-HSC_001 HSPC_001 HSPC_008
#> "0213" "023" "0211" "042" "032" "042" "023" "012" "042"
#> HSPC_014 HSPC_020 HSPC_026 HSPC_032 HSPC_038 LT-HSC_002 HSPC_002 HSPC_009 HSPC_015
#> "022" "042" "0412" "0211" "022" "042" "022" "022" "023"
#> HSPC_021 HSPC_027 HSPC_033 HSPC_039 LT-HSC_003 HSPC_003 HSPC_010 HSPC_016 HSPC_022
#> "022" "033" "031" "0211" "023" "012" "0213" "012" "0412"
#> HSPC_028 HSPC_034 HSPC_040 LT-HSC_004 HSPC_004 HSPC_011 HSPC_017 HSPC_023 HSPC_029
#> "031" "012" "032" "022" "031" "042" "022" "042" "0211"
#> HSPC_035 HSPC_041 LT-HSC_005 HSPC_005 HSPC_012 HSPC_018 HSPC_024 HSPC_030 HSPC_036
#> "022" "042" "0211" "0211" "042" "042" "022" "031" "012"
#> HSPC_042 LT-HSC_006 HSPC_006 Prog_007 Prog_013 Prog_019 Prog_025 Prog_031 Prog_037
#> "032" "022" "0412" "012" "012" "0131" "0411" "033" "033"
#> LT-HSC_007 Prog_001 Prog_008 Prog_014 Prog_020 Prog_026 Prog_032 Prog_038 LT-HSC_008
#> "042" "043" "01112" "0112" "014" "033" "014" "014" "031"
#> Prog_002 Prog_009 Prog_015 Prog_021 Prog_027 Prog_033 Prog_039 LT-HSC_009 Prog_003
#> "012" "01112" "012" "014" "012" "0112" "01112" "022" "012"
#> Prog_010 Prog_016 Prog_022 Prog_028 Prog_034 Prog_040 LT-HSC_010 Prog_004 Prog_011
#> "0412" "0411" "0411" "0112" "0211" "042" "0412" "033" "014"
#> Prog_017 Prog_023 Prog_029 Prog_035 Prog_041 LT-HSC_011 Prog_005 Prog_012 Prog_018
#> "012" "012" "014" "01111" "0213" "0213" "0213" "022" "022"
#> Prog_024 Prog_030 Prog_036 Prog_042 LT-HSC_012 Prog_006 HSPC_049 HSPC_055 HSPC_061
#> "014" "0411" "0412" "0411" "0411" "01111" "031" "042" "042"
#> HSPC_067 HSPC_073 HSPC_079 LT-HSC_013 HSPC_043 HSPC_050 HSPC_056 HSPC_062 HSPC_068
#> "042" "022" "0412" "022" "042" "043" "022" "0413" "022"
#> HSPC_074 HSPC_080 LT-HSC_014 HSPC_044 HSPC_051 HSPC_057 HSPC_063 HSPC_069 HSPC_075
#> "022" "032" "022" "043" "032" "022" "0412" "032" "022"
#> HSPC_081 LT-HSC_015 HSPC_045 HSPC_052 HSPC_058 HSPC_064 HSPC_070 HSPC_076 HSPC_082
#> "032" "022" "042" "043" "031" "0413" "033" "032" "042"
#> LT-HSC_016 HSPC_046 HSPC_053 HSPC_059 HSPC_065 HSPC_071 HSPC_077 HSPC_083 LT-HSC_017
#> "022" "032" "012" "0211" "032" "0413" "012" "022" "022"
#> HSPC_047 HSPC_054 HSPC_060 HSPC_066 HSPC_072 HSPC_078 HSPC_084 LT-HSC_018 HSPC_048
#> "023" "031" "031" "031" "0413" "043" "042" "022" "032"
#> Prog_049 Prog_055 Prog_061 Prog_067 Prog_073 Prog_079 LT-HSC_019 Prog_043 Prog_050
#> "01112" "012" "0112" "014" "032" "01112" "0211" "0132" "012"
#> Prog_056 Prog_062 Prog_068 Prog_074 Prog_080 LT-HSC_020 Prog_044 Prog_051 Prog_057
#> "012" "042" "032" "0411" "043" "031" "032" "014" "0131"
#> Prog_063 Prog_069 Prog_075 Prog_081 LT-HSC_021 Prog_045 Prog_052 Prog_058 Prog_064
#> "043" "012" "012" "01112" "0413" "0132" "043" "014" "014"
#> Prog_070 Prog_076 Prog_082 LT-HSC_022 Prog_046 Prog_053 Prog_059 Prog_065 Prog_071
#> "0412" "014" "01111" "022" "0112" "0112" "012" "0131" "012"
#> Prog_077 Prog_083 LT-HSC_023 Prog_047 Prog_054 Prog_060 Prog_066 Prog_072 Prog_078
#> "012" "012" "022" "012" "0411" "0213" "014" "033" "014"
#> Prog_084 LT-HSC_024 Prog_048 HSPC_091 HSPC_097 HSPC_103 HSPC_109 HSPC_115 HSPC_121
#> "0112" "033" "032" "0212" "023" "022" "043" "022" "023"
#> LT-HSC_025 HSPC_085 HSPC_092 HSPC_098 HSPC_104 HSPC_110 HSPC_116 HSPC_122 LT-HSC_026
#> "0212" "042" "0212" "043" "023" "043" "0211" "031" "022"
#> HSPC_086 HSPC_093 HSPC_099 HSPC_105 HSPC_111 HSPC_117 HSPC_123 LT-HSC_027 HSPC_087
#> "0211" "0211" "042" "022" "022" "042" "022" "023" "022"
#> HSPC_094 HSPC_100 HSPC_106 HSPC_112 HSPC_118 HSPC_124 LT-HSC_028 HSPC_088 HSPC_095
#> "012" "032" "022" "0211" "031" "0211" "032" "032" "022"
#> HSPC_101 HSPC_107 HSPC_113 HSPC_119 HSPC_125 LT-HSC_029 HSPC_089 HSPC_096 HSPC_102
#> "012" "042" "023" "023" "031" "0212" "032" "043" "012"
#> HSPC_108 HSPC_114 HSPC_120 HSPC_126 LT-HSC_030 HSPC_090 Prog_091 Prog_097 Prog_103
#> "031" "032" "031" "032" "0212" "012" "01111" "012" "012"
#> Prog_109 Prog_115 Prog_121 LT-HSC_031 Prog_085 Prog_092 Prog_098 Prog_104 Prog_110
#> "0412" "014" "0213" "032" "012" "033" "0112" "0211" "01112"
#> Prog_116 Prog_122 LT-HSC_032 Prog_086 Prog_093 Prog_099 Prog_105 Prog_111 Prog_117
#> "012" "033" "01111" "0212" "012" "012" "012" "014" "0132"
#> Prog_123 LT-HSC_033 Prog_087 Prog_094 Prog_100 Prog_106 Prog_112 Prog_118 Prog_124
#> "012" "031" "012" "014" "0112" "031" "01112" "0412" "033"
#> LT-HSC_034 Prog_088 Prog_095 Prog_101 Prog_107 Prog_113 Prog_119 Prog_125 LT-HSC_035
#> "031" "043" "0112" "0131" "01112" "012" "01111" "031" "0212"
#> Prog_089 Prog_096 Prog_102 Prog_108 Prog_114 Prog_120 Prog_126 LT-HSC_036 Prog_090
#> "014" "032" "031" "0411" "0413" "023" "014" "033" "0112"
#> HSPC_133 HSPC_139 HSPC_145 HSPC_151 HSPC_157 HSPC_163 LT-HSC_037 HSPC_127 HSPC_134
#> "022" "022" "023" "042" "043" "023" "023" "0412" "023"
#> HSPC_140 HSPC_146 HSPC_152 HSPC_158 HSPC_164 LT-HSC_038 HSPC_128 HSPC_135 HSPC_141
#> "023" "0412" "022" "042" "022" "023" "023" "031" "022"
#> HSPC_147 HSPC_153 HSPC_159 HSPC_165 LT-HSC_039 HSPC_129 HSPC_136 HSPC_142 HSPC_148
#> "023" "022" "042" "043" "022" "0211" "042" "042" "043"
#> HSPC_154 HSPC_160 HSPC_166 LT-HSC_040 HSPC_130 HSPC_137 HSPC_143 HSPC_149 HSPC_155
#> "043" "0211" "042" "022" "042" "0211" "022" "022" "023"
#> HSPC_161 HSPC_167 LT-HSC_041 HSPC_131 HSPC_138 HSPC_144 HSPC_150 HSPC_156 HSPC_162
#> "042" "023" "022" "022" "012" "031" "0211" "012" "032"
#> HSPC_168 LT-HSC_042 HSPC_132 Prog_133 Prog_139 Prog_145 Prog_151 Prog_157 Prog_163
#> "0413" "022" "0132" "012" "0112" "012" "032" "012" "01113"
#> LT-HSC_043 Prog_127 Prog_134 Prog_140 Prog_146 Prog_152 Prog_158 Prog_164 LT-HSC_044
#> "0132" "032" "043" "01111" "01113" "043" "01112" "0213" "043"
#> Prog_128 Prog_135 Prog_141 Prog_147 Prog_153 Prog_159 Prog_165 LT-HSC_045 Prog_129
#> "012" "032" "0132" "0211" "012" "0412" "043" "0412" "0131"
#> Prog_136 Prog_142 Prog_148 Prog_154 Prog_160 Prog_166 LT-HSC_046 Prog_130 Prog_137
#> "0132" "033" "023" "033" "022" "014" "031" "0131" "012"
#> Prog_143 Prog_149 Prog_155 Prog_161 Prog_167 LT-HSC_047 Prog_131 Prog_138 Prog_144
#> "0131" "0413" "012" "033" "012" "0213" "033" "0211" "043"
#> Prog_150 Prog_156 Prog_162 Prog_168 LT-HSC_048 Prog_132 HSPC_175 HSPC_181 HSPC_187
#> "0131" "0212" "0412" "0131" "023" "0131" "042" "022" "022"
#> HSPC_193 HSPC_199 HSPC_205 LT-HSC_049 HSPC_169 HSPC_176 HSPC_182 HSPC_188 HSPC_194
#> "033" "031" "022" "022" "042" "022" "023" "0211" "0211"
#> HSPC_200 HSPC_206 LT-HSC_050 HSPC_170 HSPC_177 HSPC_183 HSPC_189 HSPC_195 HSPC_201
#> "022" "012" "022" "023" "022" "033" "031" "012" "0211"
#> HSPC_207 LT-HSC_051 HSPC_171 HSPC_178 HSPC_184 HSPC_190 HSPC_196 HSPC_202 HSPC_208
#> "032" "022" "022" "031" "0212" "0413" "042" "032" "022"
#> LT-HSC_052 HSPC_172 HSPC_179 HSPC_185 HSPC_191 HSPC_197 HSPC_203 HSPC_209 LT-HSC_053
#> "012" "012" "012" "023" "022" "0211" "042" "0211" "0211"
#> HSPC_173 HSPC_180 HSPC_186 HSPC_192 HSPC_198 HSPC_204 HSPC_210 LT-HSC_054 HSPC_174
#> "023" "043" "033" "022" "031" "0412" "043" "022" "031"
#> Prog_175 Prog_181 Prog_187 Prog_193 Prog_199 Prog_205 LT-HSC_055 Prog_169 Prog_176
#> "0411" "0211" "033" "042" "032" "0413" "0132" "0211" "012"
#> Prog_182 Prog_188 Prog_194 Prog_200 Prog_206 LT-HSC_056 Prog_170 Prog_177 Prog_183
#> "043" "014" "023" "043" "012" "0131" "01112" "042" "0132"
#> Prog_189 Prog_195 Prog_201 Prog_207 LT-HSC_057 Prog_171 Prog_178 Prog_184 Prog_190
#> "012" "042" "0412" "014" "031" "042" "0112" "0131" "012"
#> Prog_196 Prog_202 Prog_208 LT-HSC_058 Prog_172 Prog_179 Prog_185 Prog_191 Prog_197
#> "01111" "0213" "033" "032" "014" "0131" "01111" "033" "0131"
#> Prog_203 Prog_209 LT-HSC_059 Prog_173 Prog_180 Prog_186 Prog_192 Prog_198 Prog_204
#> "0132" "0131" "0212" "043" "032" "012" "012" "0211" "023"
#> Prog_210 LT-HSC_060 Prog_174 HSPC_217 HSPC_223 HSPC_229 HSPC_235 HSPC_241 HSPC_247
#> "032" "0131" "0213" "0212" "022" "023" "022" "0211" "023"
#> LT-HSC_061 HSPC_211 HSPC_218 HSPC_224 HSPC_230 HSPC_236 HSPC_242 HSPC_248 LT-HSC_062
#> "0212" "042" "022" "022" "042" "043" "023" "022" "023"
#> HSPC_212 HSPC_219 HSPC_225 HSPC_231 HSPC_237 HSPC_243 HSPC_249 LT-HSC_063 HSPC_213
#> "023" "042" "022" "023" "022" "0412" "022" "033" "0413"
#> HSPC_220 HSPC_226 HSPC_232 HSPC_238 HSPC_244 HSPC_250 LT-HSC_064 HSPC_214 HSPC_221
#> "022" "0211" "023" "0212" "032" "0413" "0112" "012" "031"
#> HSPC_227 HSPC_233 HSPC_239 HSPC_245 HSPC_251 LT-HSC_065 HSPC_215 HSPC_222 HSPC_228
#> "022" "042" "022" "022" "0413" "031" "0412" "042" "023"
#> HSPC_234 HSPC_240 HSPC_246 HSPC_252 LT-HSC_066 HSPC_216 Prog_217 Prog_223 Prog_229
#> "0211" "031" "022" "0213" "031" "012" "01111" "042" "01112"
#> Prog_235 Prog_241 Prog_247 LT-HSC_067 Prog_211 Prog_218 Prog_224 Prog_230 Prog_236
#> "023" "022" "033" "0213" "0112" "012" "0132" "0413" "012"
#> Prog_242 Prog_248 LT-HSC_068 Prog_212 Prog_219 Prog_225 Prog_231 Prog_237 Prog_243
#> "014" "043" "012" "014" "0213" "033" "0132" "042" "0131"
#> Prog_249 LT-HSC_069 Prog_213 Prog_220 Prog_226 Prog_232 Prog_238 Prog_244 Prog_250
#> "01111" "032" "043" "0213" "031" "033" "012" "032" "014"
#> LT-HSC_070 Prog_214 Prog_221 Prog_227 Prog_233 Prog_239 Prog_245 Prog_251 LT-HSC_071
#> "043" "0413" "01111" "0132" "012" "01111" "012" "0212" "032"
#> Prog_215 Prog_222 Prog_228 Prog_234 Prog_240 Prog_246 Prog_252 LT-HSC_072 Prog_216
#> "01113" "032" "0131" "012" "012" "033" "032" "012" "01113"
#> HSPC_259 HSPC_265 HSPC_271 HSPC_277 HSPC_283 HSPC_289 LT-HSC_073 HSPC_253 HSPC_260
#> "023" "022" "0412" "023" "022" "022" "023" "0413" "0211"
#> HSPC_266 HSPC_272 HSPC_278 HSPC_284 HSPC_290 LT-HSC_074 HSPC_254 HSPC_261 HSPC_267
#> "022" "0211" "042" "0211" "0413" "022" "022" "0132" "031"
#> HSPC_273 HSPC_279 HSPC_285 HSPC_291 LT-HSC_075 HSPC_255 HSPC_262 HSPC_268 HSPC_274
#> "0211" "043" "012" "033" "031" "032" "0212" "012" "022"
#> HSPC_280 HSPC_286 HSPC_292 LT-HSC_076 HSPC_256 HSPC_263 HSPC_269 HSPC_275 HSPC_281
#> "0412" "042" "0412" "042" "0112" "0412" "0132" "0131" "023"
#> HSPC_287 HSPC_293 LT-HSC_077 HSPC_257 HSPC_264 HSPC_270 HSPC_276 HSPC_282 HSPC_288
#> "0413" "0412" "023" "0413" "022" "032" "032" "012" "012"
#> HSPC_294 LT-HSC_078 HSPC_258 Prog_259 Prog_265 Prog_271 Prog_277 Prog_283 Prog_289
#> "0413" "022" "012" "031" "0112" "033" "031" "042" "0412"
#> LT-HSC_079 Prog_253 Prog_260 Prog_266 Prog_272 Prog_278 Prog_284 Prog_290 LT-HSC_080
#> "0211" "014" "012" "012" "012" "0112" "014" "0112" "032"
#> Prog_254 Prog_261 Prog_267 Prog_273 Prog_279 Prog_285 Prog_291 LT-HSC_081 Prog_255
#> "0112" "014" "0131" "0131" "01112" "014" "0411" "012" "012"
#> Prog_262 Prog_268 Prog_274 Prog_280 Prog_286 Prog_292 LT-HSC_082 Prog_256 Prog_263
#> "012" "012" "014" "033" "0112" "012" "032" "042" "0131"
#> Prog_269 Prog_275 Prog_281 Prog_287 Prog_293 LT-HSC_083 Prog_257 Prog_264 Prog_270
#> "0112" "012" "014" "0131" "033" "0212" "0213" "023" "0131"
#> Prog_276 Prog_282 Prog_288 Prog_294 LT-HSC_084 Prog_258 HSPC_301 HSPC_307 HSPC_313
#> "012" "01113" "0112" "012" "033" "0132" "023" "022" "042"
#> HSPC_319 HSPC_325 HSPC_331 LT-HSC_085 HSPC_295 HSPC_302 HSPC_308 HSPC_314 HSPC_320
#> "0212" "022" "022" "022" "0413" "023" "043" "042" "043"
#> HSPC_326 HSPC_332 LT-HSC_086 HSPC_296 HSPC_303 HSPC_309 HSPC_315 HSPC_321 HSPC_327
#> "022" "012" "042" "022" "012" "022" "022" "042" "012"
#> HSPC_333 LT-HSC_087 HSPC_297 HSPC_304 HSPC_310 HSPC_316 HSPC_322 HSPC_328 HSPC_334
#> "012" "0212" "022" "032" "022" "023" "031" "042" "022"
#> LT-HSC_088 HSPC_298 HSPC_305 HSPC_311 HSPC_317 HSPC_323 HSPC_329 HSPC_335 LT-HSC_089
#> "043" "032" "0412" "0212" "023" "031" "042" "022" "022"
#> HSPC_299 HSPC_306 HSPC_312 HSPC_318 HSPC_324 HSPC_330 HSPC_336 LT-HSC_090 HSPC_300
#> "033" "033" "0413" "022" "031" "031" "022" "032" "012"
#> Prog_301 Prog_307 Prog_313 Prog_319 Prog_325 Prog_331 LT-HSC_091 Prog_295 Prog_302
#> "0411" "0412" "0413" "0132" "012" "012" "01111" "0412" "0212"
#> Prog_308 Prog_314 Prog_320 Prog_326 Prog_332 LT-HSC_092 Prog_296 Prog_303 Prog_309
#> "012" "033" "012" "01111" "012" "0212" "012" "022" "022"
#> Prog_315 Prog_321 Prog_327 Prog_333 LT-HSC_093 Prog_297 Prog_304 Prog_310 Prog_316
#> "0411" "0411" "012" "043" "042" "043" "012" "0412" "0411"
#> Prog_322 Prog_328 Prog_334 LT-HSC_094 Prog_298 Prog_305 Prog_311 Prog_317 Prog_323
#> "043" "0411" "014" "042" "014" "0413" "043" "0212" "0411"
#> Prog_329 Prog_335 LT-HSC_095 Prog_299 Prog_306 Prog_312 Prog_318 Prog_324 Prog_330
#> "0411" "0413" "01112" "0112" "022" "01111" "01111" "0112" "0132"
#> Prog_336 LT-HSC_096 Prog_300 HSPC_343 HSPC_349 HSPC_355 HSPC_361 HSPC_367 HSPC_373
#> "0132" "012" "0131" "0132" "031" "0213" "023" "022" "023"
#> LT-HSC_097 HSPC_337 HSPC_344 HSPC_350 HSPC_356 HSPC_362 HSPC_368 HSPC_374 LT-HSC_098
#> "0212" "022" "0412" "022" "043" "0411" "042" "032" "0112"
#> HSPC_338 HSPC_345 HSPC_351 HSPC_357 HSPC_363 HSPC_369 HSPC_375 LT-HSC_099 HSPC_339
#> "01112" "043" "043" "0211" "022" "0211" "0211" "023" "032"
#> HSPC_346 HSPC_352 HSPC_358 HSPC_364 HSPC_370 HSPC_376 LT-HSC_100 HSPC_340 HSPC_347
#> "012" "0412" "042" "042" "0131" "042" "01112" "0213" "0211"
#> HSPC_353 HSPC_359 HSPC_365 HSPC_371 HSPC_377 LT-HSC_101 HSPC_341 HSPC_348 HSPC_354
#> "012" "032" "023" "012" "0413" "0411" "012" "033" "022"
#> HSPC_360 HSPC_366 HSPC_372 HSPC_378 LT-HSC_102 HSPC_342 Prog_343 Prog_349 Prog_355
#> "042" "0213" "042" "0212" "01112" "0131" "0132" "0411" "0413"
#> Prog_361 Prog_367 Prog_373 LT-HSC_103 Prog_337 Prog_344 Prog_350 Prog_356 Prog_362
#> "014" "0131" "01113" "0132" "01111" "0211" "014" "0112" "0412"
#> Prog_368 Prog_374 LT-HSC_104 Prog_338 Prog_345 Prog_351 Prog_357 Prog_363 Prog_369
#> "014" "014" "0212" "012" "0411" "014" "01112" "014" "0411"
#> Prog_375 LT-HSC_105 Prog_339 Prog_346 Prog_352 Prog_358 Prog_364 Prog_370 Prog_376
#> "01112" "0411" "0112" "014" "01112" "031" "0112" "0411" "0112"
#> LT-HSC_106 Prog_340 Prog_347 Prog_353 Prog_359 Prog_365 Prog_371 Prog_377 LT-HSC_107
#> "0412" "014" "0213" "0132" "0112" "0213" "012" "01111" "023"
#> Prog_341 Prog_348 Prog_354 Prog_360 Prog_366 Prog_372 Prog_378 LT-HSC_108 Prog_342
#> "012" "0212" "0412" "01112" "014" "0112" "032" "012" "01112"
#> HSPC_385 HSPC_391 HSPC_397 HSPC_403 HSPC_409 HSPC_415 HSPC_421 HSPC_379 HSPC_386
#> "0211" "031" "0211" "042" "023" "023" "043" "0212" "042"
#> HSPC_392 HSPC_398 HSPC_404 HSPC_410 HSPC_416 HSPC_422 HSPC_380 HSPC_387 HSPC_393
#> "032" "032" "0112" "012" "031" "032" "032" "0412" "0411"
#> HSPC_399 HSPC_405 HSPC_411 HSPC_417 HSPC_423 HSPC_381 HSPC_388 HSPC_394 HSPC_400
#> "031" "032" "012" "012" "012" "0211" "012" "0211" "0412"
#> HSPC_406 HSPC_412 HSPC_418 HSPC_424 HSPC_382 HSPC_389 HSPC_395 HSPC_401 HSPC_407
#> "042" "0131" "031" "0413" "012" "014" "043" "0211" "0131"
#> HSPC_413 HSPC_419 HSPC_425 HSPC_383 HSPC_390 HSPC_396 HSPC_402 HSPC_408 HSPC_414
#> "042" "0131" "0413" "022" "042" "032" "032" "01111" "0211"
#> HSPC_420 HSPC_426 HSPC_384 Prog_385 Prog_391 Prog_397 Prog_403 Prog_409 Prog_415
#> "012" "042" "0211" "01111" "0213" "01112" "0112" "01112" "01112"
#> Prog_421 Prog_379 Prog_386 Prog_392 Prog_398 Prog_404 Prog_410 Prog_416 Prog_422
#> "01112" "0112" "01112" "012" "01112" "01113" "0112" "0112" "0413"
#> Prog_380 Prog_387 Prog_393 Prog_399 Prog_405 Prog_411 Prog_417 Prog_423 Prog_381
#> "0112" "0131" "0112" "012" "012" "042" "0411" "0412" "0112"
#> Prog_388 Prog_394 Prog_400 Prog_406 Prog_412 Prog_418 Prog_424 Prog_382 Prog_389
#> "01112" "033" "0211" "0112" "012" "014" "0112" "031" "0132"
#> Prog_395 Prog_401 Prog_407 Prog_413 Prog_419 Prog_425 Prog_383 Prog_390 Prog_396
#> "01112" "0132" "033" "012" "01112" "014" "01111" "043" "014"
#> Prog_402 Prog_408 Prog_414 Prog_420 Prog_426 Prog_384 HSPC_433 HSPC_439 HSPC_445
#> "0412" "014" "0131" "012" "012" "0411" "0212" "0212" "0212"
#> HSPC_451 HSPC_457 HSPC_463 LT-HSC_109 HSPC_427 HSPC_434 HSPC_440 HSPC_446 HSPC_452
#> "023" "022" "032" "022" "023" "0213" "042" "022" "0211"
#> HSPC_458 HSPC_464 LT-HSC_110 HSPC_428 HSPC_435 HSPC_441 HSPC_447 HSPC_453 HSPC_459
#> "0211" "0211" "031" "0212" "031" "031" "033" "032" "031"
#> HSPC_465 LT-HSC_111 HSPC_429 HSPC_436 HSPC_442 HSPC_448 HSPC_454 HSPC_460 HSPC_466
#> "031" "022" "0211" "0132" "012" "031" "0132" "031" "042"
#> LT-HSC_112 HSPC_430 HSPC_437 HSPC_443 HSPC_449 HSPC_455 HSPC_461 HSPC_467 LT-HSC_113
#> "032" "031" "0211" "031" "031" "022" "042" "031" "032"
#> HSPC_431 HSPC_438 HSPC_444 HSPC_450 HSPC_456 HSPC_462 HSPC_468 LT-HSC_114 HSPC_432
#> "031" "0213" "022" "022" "012" "031" "031" "023" "022"
#> Prog_433 Prog_439 Prog_445 Prog_451 Prog_457 Prog_463 LT-HSC_115 Prog_427 Prog_434
#> "031" "033" "032" "0131" "014" "033" "012" "022" "01111"
#> Prog_440 Prog_446 Prog_452 Prog_458 Prog_464 LT-HSC_116 Prog_428 Prog_435 Prog_441
#> "043" "032" "0212" "043" "032" "031" "012" "0411" "012"
#> Prog_447 Prog_453 Prog_459 Prog_465 LT-HSC_117 Prog_429 Prog_436 Prog_442 Prog_448
#> "012" "014" "033" "043" "031" "01111" "012" "0211" "033"
#> Prog_454 Prog_460 Prog_466 LT-HSC_118 Prog_430 Prog_437 Prog_443 Prog_449 Prog_455
#> "0412" "042" "0411" "0211" "0112" "0132" "0131" "01111" "031"
#> Prog_461 Prog_467 LT-HSC_119 Prog_431 Prog_438 Prog_444 Prog_450 Prog_456 Prog_462
#> "022" "033" "0213" "033" "022" "01111" "012" "012" "042"
#> Prog_468 LT-HSC_120 Prog_432 HSPC_475 HSPC_481 HSPC_487 HSPC_493 HSPC_499 HSPC_505
#> "0411" "0413" "043" "022" "023" "0212" "022" "022" "042"
#> LT-HSC_121 HSPC_469 HSPC_476 HSPC_482 HSPC_488 HSPC_494 HSPC_500 HSPC_506 LT-HSC_122
#> "0213" "023" "0211" "022" "022" "022" "022" "022" "042"
#> HSPC_470 HSPC_477 HSPC_483 HSPC_489 HSPC_495 HSPC_501 HSPC_507 LT-HSC_123 HSPC_471
#> "022" "012" "022" "042" "043" "023" "022" "022" "022"
#> HSPC_478 HSPC_484 HSPC_490 HSPC_496 HSPC_502 HSPC_508 LT-HSC_124 HSPC_472 HSPC_479
#> "022" "0211" "031" "031" "032" "0131" "031" "032" "031"
#> HSPC_485 HSPC_491 HSPC_497 HSPC_503 HSPC_509 LT-HSC_125 HSPC_473 HSPC_480 HSPC_486
#> "012" "0412" "022" "012" "042" "031" "031" "032" "042"
#> HSPC_492 HSPC_498 HSPC_504 HSPC_510 LT-HSC_126 HSPC_474 Prog_475 Prog_481 Prog_487
#> "032" "031" "022" "0412" "032" "032" "0131" "033" "0131"
#> Prog_493 Prog_499 Prog_505 LT-HSC_127 Prog_469 Prog_476 Prog_482 Prog_488 Prog_494
#> "012" "012" "0131" "0212" "042" "012" "012" "0131" "043"
#> Prog_500 Prog_506 LT-HSC_128 Prog_470 Prog_477 Prog_483 Prog_489 Prog_495 Prog_501
#> "0131" "012" "031" "012" "0112" "043" "012" "032" "012"
#> Prog_507 LT-HSC_129 Prog_471 Prog_478 Prog_484 Prog_490 Prog_496 Prog_502 Prog_508
#> "0411" "0211" "012" "01113" "012" "043" "033" "0112" "01113"
#> LT-HSC_130 Prog_472 Prog_479 Prog_485 Prog_491 Prog_497 Prog_503 Prog_509 LT-HSC_131
#> "0132" "043" "012" "0132" "0131" "0411" "043" "031" "031"
#> Prog_473 Prog_480 Prog_486 Prog_492 Prog_498 Prog_504 Prog_510 LT-HSC_132 Prog_474
#> "012" "023" "012" "031" "0213" "012" "042" "014" "032"
#> HSPC_517 HSPC_523 HSPC_529 HSPC_535 HSPC_541 HSPC_547 LT-HSC_133 HSPC_511 HSPC_518
#> "023" "032" "0211" "022" "022" "032" "0212" "023" "022"
#> HSPC_524 HSPC_530 HSPC_536 HSPC_542 HSPC_548 LT-HSC_134 HSPC_512 HSPC_519 HSPC_525
#> "022" "022" "0211" "0211" "022" "023" "032" "0211" "023"
#> HSPC_531 HSPC_537 HSPC_543 HSPC_549 LT-HSC_135 HSPC_513 HSPC_520 HSPC_526 HSPC_532
#> "022" "042" "042" "022" "022" "0212" "042" "031" "042"
#> HSPC_538 HSPC_544 HSPC_550 LT-HSC_136 HSPC_514 HSPC_521 HSPC_527 HSPC_533 HSPC_539
#> "031" "012" "042" "023" "031" "022" "012" "032" "022"
#> HSPC_545 HSPC_551 LT-HSC_137 HSPC_515 HSPC_522 HSPC_528 HSPC_534 HSPC_540 HSPC_546
#> "022" "042" "022" "031" "022" "0413" "031" "032" "022"
#> HSPC_552 LT-HSC_138 HSPC_516 Prog_517 Prog_523 Prog_529 Prog_535 Prog_541 Prog_547
#> "042" "022" "032" "033" "0112" "0131" "0112" "0131" "0132"
#> LT-HSC_139 Prog_511 Prog_518 Prog_524 Prog_530 Prog_536 Prog_542 Prog_548 LT-HSC_140
#> "031" "031" "0413" "042" "012" "0112" "0413" "0112" "022"
#> Prog_512 Prog_519 Prog_525 Prog_531 Prog_537 Prog_543 Prog_549 LT-HSC_141 Prog_513
#> "0411" "042" "043" "0131" "022" "014" "0413" "0211" "033"
#> Prog_520 Prog_526 Prog_532 Prog_538 Prog_544 Prog_550 LT-HSC_142 Prog_514 Prog_521
#> "0131" "023" "022" "0212" "023" "012" "012" "012" "012"
#> Prog_527 Prog_533 Prog_539 Prog_545 Prog_551 LT-HSC_143 Prog_515 Prog_522 Prog_528
#> "012" "022" "0411" "014" "012" "0132" "043" "022" "014"
#> Prog_534 Prog_540 Prog_546 Prog_552 LT-HSC_144 Prog_516 HSPC_559 HSPC_565 HSPC_571
#> "043" "023" "023" "0412" "042" "01111" "022" "023" "031"
#> HSPC_577 HSPC_583 HSPC_589 LT-HSC_145 HSPC_553 HSPC_560 HSPC_566 HSPC_572 HSPC_578
#> "022" "0211" "022" "022" "0131" "022" "022" "023" "022"
#> HSPC_584 HSPC_590 LT-HSC_146 HSPC_554 HSPC_561 HSPC_567 HSPC_573 HSPC_579 HSPC_585
#> "022" "042" "031" "022" "0211" "031" "022" "031" "022"
#> HSPC_591 LT-HSC_147 HSPC_555 HSPC_562 HSPC_568 HSPC_574 HSPC_580 HSPC_586 HSPC_592
#> "023" "022" "022" "023" "022" "012" "032" "032" "031"
#> LT-HSC_148 HSPC_556 HSPC_563 HSPC_569 HSPC_575 HSPC_581 HSPC_587 HSPC_593 LT-HSC_149
#> "042" "032" "031" "0413" "031" "0211" "0211" "022" "022"
#> HSPC_557 HSPC_564 HSPC_570 HSPC_576 HSPC_582 HSPC_588 HSPC_594 LT-HSC_150 HSPC_558
#> "032" "0211" "0211" "022" "022" "0212" "022" "022" "0211"
#> Prog_559 Prog_565 Prog_571 Prog_577 Prog_583 Prog_589 LT-HSC_151 Prog_553 Prog_560
#> "012" "012" "012" "012" "023" "023" "032" "043" "012"
#> Prog_566 Prog_572 Prog_578 Prog_584 Prog_590 LT-HSC_152 Prog_554 Prog_561 Prog_567
#> "014" "032" "0413" "012" "012" "022" "031" "042" "012"
#> Prog_573 Prog_579 Prog_585 Prog_591 LT-HSC_153 Prog_555 Prog_562 Prog_568 Prog_574
#> "023" "012" "033" "023" "022" "031" "0112" "033" "012"
#> Prog_580 Prog_586 Prog_592 LT-HSC_154 Prog_556 Prog_563 Prog_569 Prog_575 Prog_581
#> "031" "043" "01111" "0211" "033" "0213" "0131" "01113" "012"
#> Prog_587 Prog_593 LT-HSC_155 Prog_557 Prog_564 Prog_570 Prog_576 Prog_582 Prog_588
#> "0132" "012" "0211" "012" "031" "0411" "014" "012" "031"
#> Prog_594 LT-HSC_156 Prog_558 HSPC_601 HSPC_607 HSPC_613 HSPC_619 HSPC_625 HSPC_631
#> "033" "012" "031" "042" "023" "042" "0211" "022" "0412"
#> LT-HSC_157 HSPC_595 HSPC_602 HSPC_608 HSPC_614 HSPC_620 HSPC_626 HSPC_632 LT-HSC_158
#> "023" "031" "022" "022" "042" "022" "023" "0211" "022"
#> HSPC_596 HSPC_603 HSPC_609 HSPC_615 HSPC_621 HSPC_627 HSPC_633 LT-HSC_159 HSPC_597
#> "042" "032" "023" "023" "0211" "042" "023" "0411" "042"
#> HSPC_604 HSPC_610 HSPC_616 HSPC_622 HSPC_628 HSPC_634 LT-HSC_160 HSPC_598 HSPC_605
#> "022" "022" "0211" "0211" "042" "042" "023" "042" "0213"
#> HSPC_611 HSPC_617 HSPC_623 HSPC_629 HSPC_635 LT-HSC_161 HSPC_599 HSPC_606 HSPC_612
#> "0211" "032" "042" "042" "042" "023" "022" "031" "031"
#> HSPC_618 HSPC_624 HSPC_630 HSPC_636 LT-HSC_162 HSPC_600 Prog_601 Prog_607 Prog_613
#> "022" "032" "022" "031" "023" "023" "0211" "012" "033"
#> Prog_619 Prog_625 Prog_631 LT-HSC_163 Prog_595 Prog_602 Prog_608 Prog_614 Prog_620
#> "022" "0413" "032" "022" "022" "0132" "0112" "0132" "042"
#> Prog_626 Prog_632 LT-HSC_164 Prog_596 Prog_603 Prog_609 Prog_615 Prog_621 Prog_627
#> "012" "012" "031" "033" "0112" "012" "0411" "012" "031"
#> Prog_633 LT-HSC_165 Prog_597 Prog_604 Prog_610 Prog_616 Prog_622 Prog_628 Prog_634
#> "043" "022" "033" "033" "033" "01112" "012" "012" "043"
#> LT-HSC_166 Prog_598 Prog_605 Prog_611 Prog_617 Prog_623 Prog_629 Prog_635 LT-HSC_167
#> "042" "012" "014" "033" "031" "0132" "012" "033" "022"
#> Prog_599 Prog_606 Prog_612 Prog_618 Prog_624 Prog_630 Prog_636 LT-HSC_168 Prog_600
#> "012" "031" "0131" "012" "012" "0131" "0213" "0131" "012"
#> HSPC_643 HSPC_649 HSPC_655 HSPC_661 HSPC_667 HSPC_673 LT-HSC_169 HSPC_637 HSPC_644
#> "042" "032" "0212" "042" "022" "022" "023" "031" "0132"
#> HSPC_650 HSPC_656 HSPC_662 HSPC_668 HSPC_674 LT-HSC_170 HSPC_638 HSPC_645 HSPC_651
#> "0211" "022" "022" "032" "031" "042" "0132" "032" "0411"
#> HSPC_657 HSPC_663 HSPC_669 HSPC_675 LT-HSC_171 HSPC_639 HSPC_646 HSPC_652 HSPC_658
#> "023" "0412" "022" "0212" "042" "031" "031" "042" "0412"
#> HSPC_664 HSPC_670 HSPC_676 LT-HSC_172 HSPC_640 HSPC_647 HSPC_653 HSPC_659 HSPC_665
#> "032" "023" "022" "022" "031" "022" "0211" "0211" "042"
#> HSPC_671 HSPC_677 LT-HSC_173 HSPC_641 HSPC_648 HSPC_654 HSPC_660 HSPC_666 HSPC_672
#> "032" "023" "022" "031" "022" "042" "043" "0413" "032"
#> HSPC_678 LT-HSC_174 HSPC_642 Prog_643 Prog_649 Prog_655 Prog_661 Prog_667 Prog_673
#> "022" "031" "0211" "0412" "0112" "0112" "0131" "043" "042"
#> LT-HSC_175 Prog_637 Prog_644 Prog_650 Prog_656 Prog_662 Prog_668 Prog_674 LT-HSC_176
#> "0211" "014" "033" "012" "033" "033" "023" "033" "022"
#> Prog_638 Prog_645 Prog_651 Prog_657 Prog_663 Prog_669 Prog_675 LT-HSC_177 Prog_639
#> "0112" "043" "031" "01112" "0112" "023" "012" "022" "014"
#> Prog_646 Prog_652 Prog_658 Prog_664 Prog_670 Prog_676 LT-HSC_178 Prog_640 Prog_647
#> "012" "012" "012" "023" "012" "033" "0211" "01113" "043"
#> Prog_653 Prog_659 Prog_665 Prog_671 Prog_677 LT-HSC_179 Prog_641 Prog_648 Prog_654
#> "043" "033" "031" "031" "0112" "031" "023" "042" "0132"
#> Prog_660 Prog_666 Prog_672 Prog_678 LT-HSC_180 Prog_642 HSPC_685 HSPC_691 HSPC_697
#> "031" "033" "031" "0411" "043" "032" "0213" "0212" "0413"
#> HSPC_703 HSPC_709 HSPC_715 LT-HSC_181 HSPC_679 HSPC_686 HSPC_692 HSPC_698 HSPC_704
#> "022" "023" "0212" "0212" "031" "0211" "023" "022" "022"
#> HSPC_710 HSPC_716 LT-HSC_182 HSPC_680 HSPC_687 HSPC_693 HSPC_699 HSPC_705 HSPC_711
#> "0211" "022" "0213" "022" "023" "023" "022" "012" "0211"
#> HSPC_717 LT-HSC_183 HSPC_681 HSPC_688 HSPC_694 HSPC_700 HSPC_706 HSPC_712 HSPC_718
#> "0412" "031" "042" "0211" "0211" "0413" "033" "0211" "0211"
#> LT-HSC_184 HSPC_682 HSPC_689 HSPC_695 HSPC_701 HSPC_707 HSPC_713 HSPC_719 LT-HSC_185
#> "031" "012" "022" "0132" "042" "042" "0212" "022" "023"
#> HSPC_683 HSPC_690 HSPC_696 HSPC_702 HSPC_708 HSPC_714 HSPC_720 LT-HSC_186 HSPC_684
#> "0412" "022" "043" "022" "031" "022" "012" "0211" "023"
#> Prog_685 Prog_691 Prog_697 Prog_703 Prog_709 Prog_715 LT-HSC_187 Prog_679 Prog_686
#> "012" "0213" "0112" "043" "014" "012" "031" "012" "0413"
#> Prog_692 Prog_698 Prog_704 Prog_710 Prog_716 LT-HSC_188 Prog_680 Prog_687 Prog_693
#> "032" "0131" "031" "031" "033" "031" "012" "012" "012"
#> Prog_699 Prog_705 Prog_711 Prog_717 LT-HSC_189 Prog_681 Prog_688 Prog_694 Prog_700
#> "012" "012" "033" "012" "0211" "0131" "0112" "033" "01112"
#> Prog_706 Prog_712 Prog_718 LT-HSC_190 Prog_682 Prog_689 Prog_695 Prog_701 Prog_707
#> "0131" "0132" "012" "023" "0132" "033" "01111" "01112" "033"
#> Prog_713 Prog_719 LT-HSC_191 Prog_683 Prog_690 Prog_696 Prog_702 Prog_708 Prog_714
#> "0131" "0112" "031" "023" "033" "0411" "014" "014" "014"
#> Prog_720 LT-HSC_192 Prog_684 HSPC_727 HSPC_733 HSPC_739 HSPC_745 HSPC_751 HSPC_757
#> "014" "012" "032" "022" "022" "023" "023" "022" "022"
#> LT-HSC_193 HSPC_721 HSPC_728 HSPC_734 HSPC_740 HSPC_746 HSPC_752 HSPC_758 LT-HSC_194
#> "022" "023" "0213" "012" "022" "023" "023" "032" "022"
#> HSPC_722 HSPC_729 HSPC_735 HSPC_741 HSPC_747 HSPC_753 HSPC_759 LT-HSC_195 HSPC_723
#> "031" "031" "042" "0211" "022" "031" "032" "032" "032"
#> HSPC_730 HSPC_736 HSPC_742 HSPC_748 HSPC_754 HSPC_760 LT-HSC_196 HSPC_724 HSPC_731
#> "031" "032" "032" "022" "0213" "042" "0211" "032" "0412"
#> HSPC_737 HSPC_743 HSPC_749 HSPC_755 HSPC_761 LT-HSC_197 HSPC_725 HSPC_732 HSPC_738
#> "012" "031" "022" "031" "032" "022" "023" "032" "022"
#> HSPC_744 HSPC_750 HSPC_756 HSPC_762 LT-HSC_198 HSPC_726 Prog_727 Prog_733 Prog_739
#> "042" "031" "022" "042" "022" "0213" "012" "033" "0412"
#> Prog_745 Prog_751 Prog_757 LT-HSC_199 Prog_721 Prog_728 Prog_734 Prog_740 Prog_746
#> "033" "033" "0412" "0211" "014" "032" "014" "033" "0411"
#> Prog_752 Prog_758 LT-HSC_200 Prog_722 Prog_729 Prog_735 Prog_741 Prog_747 Prog_753
#> "033" "033" "022" "014" "023" "012" "0213" "033" "0131"
#> Prog_759 LT-HSC_201 Prog_723 Prog_730 Prog_736 Prog_742 Prog_748 Prog_754 Prog_760
#> "012" "022" "0112" "0112" "0131" "0213" "0413" "0131" "012"
#> LT-HSC_202 Prog_724 Prog_731 Prog_737 Prog_743 Prog_749 Prog_755 Prog_761 LT-HSC_203
#> "031" "033" "0112" "031" "012" "043" "0213" "0412" "0213"
#> Prog_725 Prog_732 Prog_738 Prog_744 Prog_750 Prog_756 Prog_762 LT-HSC_204 Prog_726
#> "031" "043" "033" "033" "0413" "043" "031" "032" "031"
#> HSPC_769 HSPC_775 HSPC_781 HSPC_787 HSPC_793 HSPC_799 LT-HSC_205 HSPC_763 HSPC_770
#> "023" "023" "022" "023" "0212" "023" "023" "0212" "042"
#> HSPC_776 HSPC_782 HSPC_788 HSPC_794 HSPC_800 LT-HSC_206 HSPC_764 HSPC_771 HSPC_777
#> "023" "022" "023" "032" "0413" "022" "022" "032" "032"
#> HSPC_783 HSPC_789 HSPC_795 HSPC_801 LT-HSC_207 HSPC_765 HSPC_772 HSPC_778 HSPC_784
#> "022" "042" "032" "031" "042" "023" "042" "031" "031"
#> HSPC_790 HSPC_796 HSPC_802 LT-HSC_208 HSPC_766 HSPC_773 HSPC_779 HSPC_785 HSPC_791
#> "042" "012" "022" "022" "012" "032" "042" "031" "043"
#> HSPC_797 HSPC_803 LT-HSC_209 HSPC_767 HSPC_774 HSPC_780 HSPC_786 HSPC_792 HSPC_798
#> "032" "022" "0211" "012" "032" "031" "031" "0213" "022"
#> HSPC_804 LT-HSC_210 HSPC_768 Prog_769 Prog_775 Prog_781 Prog_787 Prog_793 Prog_799
#> "022" "022" "023" "012" "033" "012" "043" "0132" "033"
#> LT-HSC_211 Prog_763 Prog_770 Prog_776 Prog_782 Prog_788 Prog_794 Prog_800 LT-HSC_212
#> "042" "012" "014" "0112" "012" "0112" "012" "012" "031"
#> Prog_764 Prog_771 Prog_777 Prog_783 Prog_789 Prog_795 Prog_801 LT-HSC_213 Prog_765
#> "012" "014" "012" "014" "012" "012" "0132" "022" "0131"
#> Prog_772 Prog_778 Prog_784 Prog_790 Prog_796 Prog_802 LT-HSC_214 Prog_766 Prog_773
#> "012" "023" "032" "0112" "0412" "014" "031" "0212" "0212"
#> Prog_779 Prog_785 Prog_791 Prog_797 Prog_803 LT-HSC_215 Prog_767 Prog_774 Prog_780
#> "0131" "033" "012" "031" "043" "032" "01113" "012" "01113"
#> Prog_786 Prog_792 Prog_798 Prog_804 LT-HSC_216 Prog_768 HSPC_811 HSPC_817 HSPC_823
#> "01113" "0131" "0131" "012" "0411" "012" "0212" "0212" "0212"
#> HSPC_829 HSPC_835 HSPC_841 HSPC_847 HSPC_805 HSPC_812 HSPC_818 HSPC_824 HSPC_830
#> "0213" "032" "043" "023" "0212" "012" "031" "031" "0212"
#> HSPC_836 HSPC_842 HSPC_848 HSPC_806 HSPC_813 HSPC_819 HSPC_825 HSPC_831 HSPC_837
#> "023" "023" "022" "023" "012" "042" "031" "031" "0412"
#> HSPC_843 HSPC_849 HSPC_807 HSPC_814 HSPC_820 HSPC_826 HSPC_832 HSPC_838 HSPC_844
#> "031" "022" "012" "0413" "012" "031" "032" "032" "022"
#> HSPC_850 HSPC_808 HSPC_815 HSPC_821 HSPC_827 HSPC_833 HSPC_839 HSPC_845 HSPC_851
#> "0211" "012" "032" "042" "022" "012" "0413" "031" "023"
#> HSPC_809 HSPC_816 HSPC_822 HSPC_828 HSPC_834 HSPC_840 HSPC_846 HSPC_852 HSPC_810
#> "022" "042" "031" "032" "032" "022" "042" "022" "022"
#> Prog_811 Prog_817 Prog_823 Prog_829 Prog_835 Prog_841 Prog_847 Prog_805 Prog_812
#> "014" "0132" "031" "012" "014" "0411" "012" "042" "023"
#> Prog_818 Prog_824 Prog_830 Prog_836 Prog_842 Prog_848 Prog_806 Prog_813 Prog_819
#> "014" "012" "0112" "0131" "014" "022" "033" "0112" "0112"
#> Prog_825 Prog_831 Prog_837 Prog_843 Prog_849 Prog_807 Prog_814 Prog_820 Prog_826
#> "01113" "014" "014" "0131" "042" "014" "0112" "0132" "0112"
#> Prog_832 Prog_838 Prog_844 Prog_850 Prog_808 Prog_815 Prog_821 Prog_827 Prog_833
#> "012" "0112" "014" "014" "012" "014" "01113" "033" "012"
#> Prog_839 Prog_845 Prog_851 Prog_809 Prog_816 Prog_822 Prog_828 Prog_834 Prog_840
#> "0131" "0131" "033" "0132" "012" "01113" "01113" "012" "012"
#> Prog_846 Prog_852 Prog_810
#> "012" "0411" "0131"
get_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 1497))
#> HSPC_007 HSPC_013 HSPC_019 HSPC_025 HSPC_031 HSPC_037 LT-HSC_001 HSPC_001 HSPC_008
#> "0213" "023" "0211" "042" "032" "042" "023" "012" "042"
#> HSPC_014 HSPC_020 HSPC_026 HSPC_032 HSPC_038 LT-HSC_002 HSPC_002 HSPC_009 HSPC_015
#> "022" "042" "0412" "0211" "022" "042" "022" "022" "023"
#> HSPC_021 HSPC_027 HSPC_033 HSPC_039 LT-HSC_003 HSPC_003 HSPC_010 HSPC_016 HSPC_022
#> "022" "033" "031" "0211" "023" "012" "0213" "012" "0412"
#> HSPC_028 HSPC_034 HSPC_040 LT-HSC_004 HSPC_004 HSPC_011 HSPC_017 HSPC_023 HSPC_029
#> "031" "012" "032" "022" "031" "042" "022" "042" "0211"
#> HSPC_035 HSPC_041 LT-HSC_005 HSPC_005 HSPC_012 HSPC_018 HSPC_024 HSPC_030 HSPC_036
#> "022" "042" "0211" "0211" "042" "042" "022" "031" "012"
#> HSPC_042 LT-HSC_006 HSPC_006 Prog_007 Prog_013 Prog_019 Prog_025 Prog_031 Prog_037
#> "032" "022" "0412" "012" "012" "0131" "0411" "033" "033"
#> LT-HSC_007 Prog_001 Prog_008 Prog_014 Prog_020 Prog_026 Prog_032 Prog_038 LT-HSC_008
#> "042" "043" "01112" "0112" "014" "033" "014" "014" "031"
#> Prog_002 Prog_009 Prog_015 Prog_021 Prog_027 Prog_033 Prog_039 LT-HSC_009 Prog_003
#> "012" "01112" "012" "014" "012" "0112" "01112" "022" "012"
#> Prog_010 Prog_016 Prog_022 Prog_028 Prog_034 Prog_040 LT-HSC_010 Prog_004 Prog_011
#> "0412" "0411" "0411" "0112" "0211" "042" "0412" "033" "014"
#> Prog_017 Prog_023 Prog_029 Prog_035 Prog_041 LT-HSC_011 Prog_005 Prog_012 Prog_018
#> "012" "012" "014" "01111" "0213" "0213" "0213" "022" "022"
#> Prog_024 Prog_030 Prog_036 Prog_042 LT-HSC_012 Prog_006 HSPC_049 HSPC_055 HSPC_061
#> "014" "0411" "0412" "0411" "0411" "01111" "031" "042" "042"
#> HSPC_067 HSPC_073 HSPC_079 LT-HSC_013 HSPC_043 HSPC_050 HSPC_056 HSPC_062 HSPC_068
#> "042" "022" "0412" "022" "042" "043" "022" "0413" "022"
#> HSPC_074 HSPC_080 LT-HSC_014 HSPC_044 HSPC_051 HSPC_057 HSPC_063 HSPC_069 HSPC_075
#> "022" "032" "022" "043" "032" "022" "0412" "032" "022"
#> HSPC_081 LT-HSC_015 HSPC_045 HSPC_052 HSPC_058 HSPC_064 HSPC_070 HSPC_076 HSPC_082
#> "032" "022" "042" "043" "031" "0413" "033" "032" "042"
#> LT-HSC_016 HSPC_046 HSPC_053 HSPC_059 HSPC_065 HSPC_071 HSPC_077 HSPC_083 LT-HSC_017
#> "022" "032" "012" "0211" "032" "0413" "012" "022" "022"
#> HSPC_047 HSPC_054 HSPC_060 HSPC_066 HSPC_072 HSPC_078 HSPC_084 LT-HSC_018 HSPC_048
#> "023" "031" "031" "031" "0413" "043" "042" "022" "032"
#> Prog_049 Prog_055 Prog_061 Prog_067 Prog_073 Prog_079 LT-HSC_019 Prog_043 Prog_050
#> "01112" "012" "0112" "014" "032" "01112" "0211" "0132" "012"
#> Prog_056 Prog_062 Prog_068 Prog_074 Prog_080 LT-HSC_020 Prog_044 Prog_051 Prog_057
#> "012" "042" "032" "0411" "043" "031" "032" "014" "0131"
#> Prog_063 Prog_069 Prog_075 Prog_081 LT-HSC_021 Prog_045 Prog_052 Prog_058 Prog_064
#> "043" "012" "012" "01112" "0413" "0132" "043" "014" "014"
#> Prog_070 Prog_076 Prog_082 LT-HSC_022 Prog_046 Prog_053 Prog_059 Prog_065 Prog_071
#> "0412" "014" "01111" "022" "0112" "0112" "012" "0131" "012"
#> Prog_077 Prog_083 LT-HSC_023 Prog_047 Prog_054 Prog_060 Prog_066 Prog_072 Prog_078
#> "012" "012" "022" "012" "0411" "0213" "014" "033" "014"
#> Prog_084 LT-HSC_024 Prog_048 HSPC_091 HSPC_097 HSPC_103 HSPC_109 HSPC_115 HSPC_121
#> "0112" "033" "032" "0212" "023" "022" "043" "022" "023"
#> LT-HSC_025 HSPC_085 HSPC_092 HSPC_098 HSPC_104 HSPC_110 HSPC_116 HSPC_122 LT-HSC_026
#> "0212" "042" "0212" "043" "023" "043" "0211" "031" "022"
#> HSPC_086 HSPC_093 HSPC_099 HSPC_105 HSPC_111 HSPC_117 HSPC_123 LT-HSC_027 HSPC_087
#> "0211" "0211" "042" "022" "022" "042" "022" "023" "022"
#> HSPC_094 HSPC_100 HSPC_106 HSPC_112 HSPC_118 HSPC_124 LT-HSC_028 HSPC_088 HSPC_095
#> "012" "032" "022" "0211" "031" "0211" "032" "032" "022"
#> HSPC_101 HSPC_107 HSPC_113 HSPC_119 HSPC_125 LT-HSC_029 HSPC_089 HSPC_096 HSPC_102
#> "012" "042" "023" "023" "031" "0212" "032" "043" "012"
#> HSPC_108 HSPC_114 HSPC_120 HSPC_126 LT-HSC_030 HSPC_090 Prog_091 Prog_097 Prog_103
#> "031" "032" "031" "032" "0212" "012" "01111" "012" "012"
#> Prog_109 Prog_115 Prog_121 LT-HSC_031 Prog_085 Prog_092 Prog_098 Prog_104 Prog_110
#> "0412" "014" "0213" "032" "012" "033" "0112" "0211" "01112"
#> Prog_116 Prog_122 LT-HSC_032 Prog_086 Prog_093 Prog_099 Prog_105 Prog_111 Prog_117
#> "012" "033" "01111" "0212" "012" "012" "012" "014" "0132"
#> Prog_123 LT-HSC_033 Prog_087 Prog_094 Prog_100 Prog_106 Prog_112 Prog_118 Prog_124
#> "012" "031" "012" "014" "0112" "031" "01112" "0412" "033"
#> LT-HSC_034 Prog_088 Prog_095 Prog_101 Prog_107 Prog_113 Prog_119 Prog_125 LT-HSC_035
#> "031" "043" "0112" "0131" "01112" "012" "01111" "031" "0212"
#> Prog_089 Prog_096 Prog_102 Prog_108 Prog_114 Prog_120 Prog_126 LT-HSC_036 Prog_090
#> "014" "032" "031" "0411" "0413" "023" "014" "033" "0112"
#> HSPC_133 HSPC_139 HSPC_145 HSPC_151 HSPC_157 HSPC_163 LT-HSC_037 HSPC_127 HSPC_134
#> "022" "022" "023" "042" "043" "023" "023" "0412" "023"
#> HSPC_140 HSPC_146 HSPC_152 HSPC_158 HSPC_164 LT-HSC_038 HSPC_128 HSPC_135 HSPC_141
#> "023" "0412" "022" "042" "022" "023" "023" "031" "022"
#> HSPC_147 HSPC_153 HSPC_159 HSPC_165 LT-HSC_039 HSPC_129 HSPC_136 HSPC_142 HSPC_148
#> "023" "022" "042" "043" "022" "0211" "042" "042" "043"
#> HSPC_154 HSPC_160 HSPC_166 LT-HSC_040 HSPC_130 HSPC_137 HSPC_143 HSPC_149 HSPC_155
#> "043" "0211" "042" "022" "042" "0211" "022" "022" "023"
#> HSPC_161 HSPC_167 LT-HSC_041 HSPC_131 HSPC_138 HSPC_144 HSPC_150 HSPC_156 HSPC_162
#> "042" "023" "022" "022" "012" "031" "0211" "012" "032"
#> HSPC_168 LT-HSC_042 HSPC_132 Prog_133 Prog_139 Prog_145 Prog_151 Prog_157 Prog_163
#> "0413" "022" "0132" "012" "0112" "012" "032" "012" "01113"
#> LT-HSC_043 Prog_127 Prog_134 Prog_140 Prog_146 Prog_152 Prog_158 Prog_164 LT-HSC_044
#> "0132" "032" "043" "01111" "01113" "043" "01112" "0213" "043"
#> Prog_128 Prog_135 Prog_141 Prog_147 Prog_153 Prog_159 Prog_165 LT-HSC_045 Prog_129
#> "012" "032" "0132" "0211" "012" "0412" "043" "0412" "0131"
#> Prog_136 Prog_142 Prog_148 Prog_154 Prog_160 Prog_166 LT-HSC_046 Prog_130 Prog_137
#> "0132" "033" "023" "033" "022" "014" "031" "0131" "012"
#> Prog_143 Prog_149 Prog_155 Prog_161 Prog_167 LT-HSC_047 Prog_131 Prog_138 Prog_144
#> "0131" "0413" "012" "033" "012" "0213" "033" "0211" "043"
#> Prog_150 Prog_156 Prog_162 Prog_168 LT-HSC_048 Prog_132 HSPC_175 HSPC_181 HSPC_187
#> "0131" "0212" "0412" "0131" "023" "0131" "042" "022" "022"
#> HSPC_193 HSPC_199 HSPC_205 LT-HSC_049 HSPC_169 HSPC_176 HSPC_182 HSPC_188 HSPC_194
#> "033" "031" "022" "022" "042" "022" "023" "0211" "0211"
#> HSPC_200 HSPC_206 LT-HSC_050 HSPC_170 HSPC_177 HSPC_183 HSPC_189 HSPC_195 HSPC_201
#> "022" "012" "022" "023" "022" "033" "031" "012" "0211"
#> HSPC_207 LT-HSC_051 HSPC_171 HSPC_178 HSPC_184 HSPC_190 HSPC_196 HSPC_202 HSPC_208
#> "032" "022" "022" "031" "0212" "0413" "042" "032" "022"
#> LT-HSC_052 HSPC_172 HSPC_179 HSPC_185 HSPC_191 HSPC_197 HSPC_203 HSPC_209 LT-HSC_053
#> "012" "012" "012" "023" "022" "0211" "042" "0211" "0211"
#> HSPC_173 HSPC_180 HSPC_186 HSPC_192 HSPC_198 HSPC_204 HSPC_210 LT-HSC_054 HSPC_174
#> "023" "043" "033" "022" "031" "0412" "043" "022" "031"
#> Prog_175 Prog_181 Prog_187 Prog_193 Prog_199 Prog_205 LT-HSC_055 Prog_169 Prog_176
#> "0411" "0211" "033" "042" "032" "0413" "0132" "0211" "012"
#> Prog_182 Prog_188 Prog_194 Prog_200 Prog_206 LT-HSC_056 Prog_170 Prog_177 Prog_183
#> "043" "014" "023" "043" "012" "0131" "01112" "042" "0132"
#> Prog_189 Prog_195 Prog_201 Prog_207 LT-HSC_057 Prog_171 Prog_178 Prog_184 Prog_190
#> "012" "042" "0412" "014" "031" "042" "0112" "0131" "012"
#> Prog_196 Prog_202 Prog_208 LT-HSC_058 Prog_172 Prog_179 Prog_185 Prog_191 Prog_197
#> "01111" "0213" "033" "032" "014" "0131" "01111" "033" "0131"
#> Prog_203 Prog_209 LT-HSC_059 Prog_173 Prog_180 Prog_186 Prog_192 Prog_198 Prog_204
#> "0132" "0131" "0212" "043" "032" "012" "012" "0211" "023"
#> Prog_210 LT-HSC_060 Prog_174 HSPC_217 HSPC_223 HSPC_229 HSPC_235 HSPC_241 HSPC_247
#> "032" "0131" "0213" "0212" "022" "023" "022" "0211" "023"
#> LT-HSC_061 HSPC_211 HSPC_218 HSPC_224 HSPC_230 HSPC_236 HSPC_242 HSPC_248 LT-HSC_062
#> "0212" "042" "022" "022" "042" "043" "023" "022" "023"
#> HSPC_212 HSPC_219 HSPC_225 HSPC_231 HSPC_237 HSPC_243 HSPC_249 LT-HSC_063 HSPC_213
#> "023" "042" "022" "023" "022" "0412" "022" "033" "0413"
#> HSPC_220 HSPC_226 HSPC_232 HSPC_238 HSPC_244 HSPC_250 LT-HSC_064 HSPC_214 HSPC_221
#> "022" "0211" "023" "0212" "032" "0413" "0112" "012" "031"
#> HSPC_227 HSPC_233 HSPC_239 HSPC_245 HSPC_251 LT-HSC_065 HSPC_215 HSPC_222 HSPC_228
#> "022" "042" "022" "022" "0413" "031" "0412" "042" "023"
#> HSPC_234 HSPC_240 HSPC_246 HSPC_252 LT-HSC_066 HSPC_216 Prog_217 Prog_223 Prog_229
#> "0211" "031" "022" "0213" "031" "012" "01111" "042" "01112"
#> Prog_235 Prog_241 Prog_247 LT-HSC_067 Prog_211 Prog_218 Prog_224 Prog_230 Prog_236
#> "023" "022" "033" "0213" "0112" "012" "0132" "0413" "012"
#> Prog_242 Prog_248 LT-HSC_068 Prog_212 Prog_219 Prog_225 Prog_231 Prog_237 Prog_243
#> "014" "043" "012" "014" "0213" "033" "0132" "042" "0131"
#> Prog_249 LT-HSC_069 Prog_213 Prog_220 Prog_226 Prog_232 Prog_238 Prog_244 Prog_250
#> "01111" "032" "043" "0213" "031" "033" "012" "032" "014"
#> LT-HSC_070 Prog_214 Prog_221 Prog_227 Prog_233 Prog_239 Prog_245 Prog_251 LT-HSC_071
#> "043" "0413" "01111" "0132" "012" "01111" "012" "0212" "032"
#> Prog_215 Prog_222 Prog_228 Prog_234 Prog_240 Prog_246 Prog_252 LT-HSC_072 Prog_216
#> "01113" "032" "0131" "012" "012" "033" "032" "012" "01113"
#> HSPC_259 HSPC_265 HSPC_271 HSPC_277 HSPC_283 HSPC_289 LT-HSC_073 HSPC_253 HSPC_260
#> "023" "022" "0412" "023" "022" "022" "023" "0413" "0211"
#> HSPC_266 HSPC_272 HSPC_278 HSPC_284 HSPC_290 LT-HSC_074 HSPC_254 HSPC_261 HSPC_267
#> "022" "0211" "042" "0211" "0413" "022" "022" "0132" "031"
#> HSPC_273 HSPC_279 HSPC_285 HSPC_291 LT-HSC_075 HSPC_255 HSPC_262 HSPC_268 HSPC_274
#> "0211" "043" "012" "033" "031" "032" "0212" "012" "022"
#> HSPC_280 HSPC_286 HSPC_292 LT-HSC_076 HSPC_256 HSPC_263 HSPC_269 HSPC_275 HSPC_281
#> "0412" "042" "0412" "042" "0112" "0412" "0132" "0131" "023"
#> HSPC_287 HSPC_293 LT-HSC_077 HSPC_257 HSPC_264 HSPC_270 HSPC_276 HSPC_282 HSPC_288
#> "0413" "0412" "023" "0413" "022" "032" "032" "012" "012"
#> HSPC_294 LT-HSC_078 HSPC_258 Prog_259 Prog_265 Prog_271 Prog_277 Prog_283 Prog_289
#> "0413" "022" "012" "031" "0112" "033" "031" "042" "0412"
#> LT-HSC_079 Prog_253 Prog_260 Prog_266 Prog_272 Prog_278 Prog_284 Prog_290 LT-HSC_080
#> "0211" "014" "012" "012" "012" "0112" "014" "0112" "032"
#> Prog_254 Prog_261 Prog_267 Prog_273 Prog_279 Prog_285 Prog_291 LT-HSC_081 Prog_255
#> "0112" "014" "0131" "0131" "01112" "014" "0411" "012" "012"
#> Prog_262 Prog_268 Prog_274 Prog_280 Prog_286 Prog_292 LT-HSC_082 Prog_256 Prog_263
#> "012" "012" "014" "033" "0112" "012" "032" "042" "0131"
#> Prog_269 Prog_275 Prog_281 Prog_287 Prog_293 LT-HSC_083 Prog_257 Prog_264 Prog_270
#> "0112" "012" "014" "0131" "033" "0212" "0213" "023" "0131"
#> Prog_276 Prog_282 Prog_288 Prog_294 LT-HSC_084 Prog_258 HSPC_301 HSPC_307 HSPC_313
#> "012" "01113" "0112" "012" "033" "0132" "023" "022" "042"
#> HSPC_319 HSPC_325 HSPC_331 LT-HSC_085 HSPC_295 HSPC_302 HSPC_308 HSPC_314 HSPC_320
#> "0212" "022" "022" "022" "0413" "023" "043" "042" "043"
#> HSPC_326 HSPC_332 LT-HSC_086 HSPC_296 HSPC_303 HSPC_309 HSPC_315 HSPC_321 HSPC_327
#> "022" "012" "042" "022" "012" "022" "022" "042" "012"
#> HSPC_333 LT-HSC_087 HSPC_297 HSPC_304 HSPC_310 HSPC_316 HSPC_322 HSPC_328 HSPC_334
#> "012" "0212" "022" "032" "022" "023" "031" "042" "022"
#> LT-HSC_088 HSPC_298 HSPC_305 HSPC_311 HSPC_317 HSPC_323 HSPC_329 HSPC_335 LT-HSC_089
#> "043" "032" "0412" "0212" "023" "031" "042" "022" "022"
#> HSPC_299 HSPC_306 HSPC_312 HSPC_318 HSPC_324 HSPC_330 HSPC_336 LT-HSC_090 HSPC_300
#> "033" "033" "0413" "022" "031" "031" "022" "032" "012"
#> Prog_301 Prog_307 Prog_313 Prog_319 Prog_325 Prog_331 LT-HSC_091 Prog_295 Prog_302
#> "0411" "0412" "0413" "0132" "012" "012" "01111" "0412" "0212"
#> Prog_308 Prog_314 Prog_320 Prog_326 Prog_332 LT-HSC_092 Prog_296 Prog_303 Prog_309
#> "012" "033" "012" "01111" "012" "0212" "012" "022" "022"
#> Prog_315 Prog_321 Prog_327 Prog_333 LT-HSC_093 Prog_297 Prog_304 Prog_310 Prog_316
#> "0411" "0411" "012" "043" "042" "043" "012" "0412" "0411"
#> Prog_322 Prog_328 Prog_334 LT-HSC_094 Prog_298 Prog_305 Prog_311 Prog_317 Prog_323
#> "043" "0411" "014" "042" "014" "0413" "043" "0212" "0411"
#> Prog_329 Prog_335 LT-HSC_095 Prog_299 Prog_306 Prog_312 Prog_318 Prog_324 Prog_330
#> "0411" "0413" "01112" "0112" "022" "01111" "01111" "0112" "0132"
#> Prog_336 LT-HSC_096 Prog_300 HSPC_343 HSPC_349 HSPC_355 HSPC_361 HSPC_367 HSPC_373
#> "0132" "012" "0131" "0132" "031" "0213" "023" "022" "023"
#> LT-HSC_097 HSPC_337 HSPC_344 HSPC_350 HSPC_356 HSPC_362 HSPC_368 HSPC_374 LT-HSC_098
#> "0212" "022" "0412" "022" "043" "0411" "042" "032" "0112"
#> HSPC_338 HSPC_345 HSPC_351 HSPC_357 HSPC_363 HSPC_369 HSPC_375 LT-HSC_099 HSPC_339
#> "01112" "043" "043" "0211" "022" "0211" "0211" "023" "032"
#> HSPC_346 HSPC_352 HSPC_358 HSPC_364 HSPC_370 HSPC_376 LT-HSC_100 HSPC_340 HSPC_347
#> "012" "0412" "042" "042" "0131" "042" "01112" "0213" "0211"
#> HSPC_353 HSPC_359 HSPC_365 HSPC_371 HSPC_377 LT-HSC_101 HSPC_341 HSPC_348 HSPC_354
#> "012" "032" "023" "012" "0413" "0411" "012" "033" "022"
#> HSPC_360 HSPC_366 HSPC_372 HSPC_378 LT-HSC_102 HSPC_342 Prog_343 Prog_349 Prog_355
#> "042" "0213" "042" "0212" "01112" "0131" "0132" "0411" "0413"
#> Prog_361 Prog_367 Prog_373 LT-HSC_103 Prog_337 Prog_344 Prog_350 Prog_356 Prog_362
#> "014" "0131" "01113" "0132" "01111" "0211" "014" "0112" "0412"
#> Prog_368 Prog_374 LT-HSC_104 Prog_338 Prog_345 Prog_351 Prog_357 Prog_363 Prog_369
#> "014" "014" "0212" "012" "0411" "014" "01112" "014" "0411"
#> Prog_375 LT-HSC_105 Prog_339 Prog_346 Prog_352 Prog_358 Prog_364 Prog_370 Prog_376
#> "01112" "0411" "0112" "014" "01112" "031" "0112" "0411" "0112"
#> LT-HSC_106 Prog_340 Prog_347 Prog_353 Prog_359 Prog_365 Prog_371 Prog_377 LT-HSC_107
#> "0412" "014" "0213" "0132" "0112" "0213" "012" "01111" "023"
#> Prog_341 Prog_348 Prog_354 Prog_360 Prog_366 Prog_372 Prog_378 LT-HSC_108 Prog_342
#> "012" "0212" "0412" "01112" "014" "0112" "032" "012" "01112"
#> HSPC_385 HSPC_391 HSPC_397 HSPC_403 HSPC_409 HSPC_415 HSPC_421 HSPC_379 HSPC_386
#> "0211" "031" "0211" "042" "023" "023" "043" "0212" "042"
#> HSPC_392 HSPC_398 HSPC_404 HSPC_410 HSPC_416 HSPC_422 HSPC_380 HSPC_387 HSPC_393
#> "032" "032" "0112" "012" "031" "032" "032" "0412" "0411"
#> HSPC_399 HSPC_405 HSPC_411 HSPC_417 HSPC_423 HSPC_381 HSPC_388 HSPC_394 HSPC_400
#> "031" "032" "012" "012" "012" "0211" "012" "0211" "0412"
#> HSPC_406 HSPC_412 HSPC_418 HSPC_424 HSPC_382 HSPC_389 HSPC_395 HSPC_401 HSPC_407
#> "042" "0131" "031" "0413" "012" "014" "043" "0211" "0131"
#> HSPC_413 HSPC_419 HSPC_425 HSPC_383 HSPC_390 HSPC_396 HSPC_402 HSPC_408 HSPC_414
#> "042" "0131" "0413" "022" "042" "032" "032" "01111" "0211"
#> HSPC_420 HSPC_426 HSPC_384 Prog_385 Prog_391 Prog_397 Prog_403 Prog_409 Prog_415
#> "012" "042" "0211" "01111" "0213" "01112" "0112" "01112" "01112"
#> Prog_421 Prog_379 Prog_386 Prog_392 Prog_398 Prog_404 Prog_410 Prog_416 Prog_422
#> "01112" "0112" "01112" "012" "01112" "01113" "0112" "0112" "0413"
#> Prog_380 Prog_387 Prog_393 Prog_399 Prog_405 Prog_411 Prog_417 Prog_423 Prog_381
#> "0112" "0131" "0112" "012" "012" "042" "0411" "0412" "0112"
#> Prog_388 Prog_394 Prog_400 Prog_406 Prog_412 Prog_418 Prog_424 Prog_382 Prog_389
#> "01112" "033" "0211" "0112" "012" "014" "0112" "031" "0132"
#> Prog_395 Prog_401 Prog_407 Prog_413 Prog_419 Prog_425 Prog_383 Prog_390 Prog_396
#> "01112" "0132" "033" "012" "01112" "014" "01111" "043" "014"
#> Prog_402 Prog_408 Prog_414 Prog_420 Prog_426 Prog_384 HSPC_433 HSPC_439 HSPC_445
#> "0412" "014" "0131" "012" "012" "0411" "0212" "0212" "0212"
#> HSPC_451 HSPC_457 HSPC_463 LT-HSC_109 HSPC_427 HSPC_434 HSPC_440 HSPC_446 HSPC_452
#> "023" "022" "032" "022" "023" "0213" "042" "022" "0211"
#> HSPC_458 HSPC_464 LT-HSC_110 HSPC_428 HSPC_435 HSPC_441 HSPC_447 HSPC_453 HSPC_459
#> "0211" "0211" "031" "0212" "031" "031" "033" "032" "031"
#> HSPC_465 LT-HSC_111 HSPC_429 HSPC_436 HSPC_442 HSPC_448 HSPC_454 HSPC_460 HSPC_466
#> "031" "022" "0211" "0132" "012" "031" "0132" "031" "042"
#> LT-HSC_112 HSPC_430 HSPC_437 HSPC_443 HSPC_449 HSPC_455 HSPC_461 HSPC_467 LT-HSC_113
#> "032" "031" "0211" "031" "031" "022" "042" "031" "032"
#> HSPC_431 HSPC_438 HSPC_444 HSPC_450 HSPC_456 HSPC_462 HSPC_468 LT-HSC_114 HSPC_432
#> "031" "0213" "022" "022" "012" "031" "031" "023" "022"
#> Prog_433 Prog_439 Prog_445 Prog_451 Prog_457 Prog_463 LT-HSC_115 Prog_427 Prog_434
#> "031" "033" "032" "0131" "014" "033" "012" "022" "01111"
#> Prog_440 Prog_446 Prog_452 Prog_458 Prog_464 LT-HSC_116 Prog_428 Prog_435 Prog_441
#> "043" "032" "0212" "043" "032" "031" "012" "0411" "012"
#> Prog_447 Prog_453 Prog_459 Prog_465 LT-HSC_117 Prog_429 Prog_436 Prog_442 Prog_448
#> "012" "014" "033" "043" "031" "01111" "012" "0211" "033"
#> Prog_454 Prog_460 Prog_466 LT-HSC_118 Prog_430 Prog_437 Prog_443 Prog_449 Prog_455
#> "0412" "042" "0411" "0211" "0112" "0132" "0131" "01111" "031"
#> Prog_461 Prog_467 LT-HSC_119 Prog_431 Prog_438 Prog_444 Prog_450 Prog_456 Prog_462
#> "022" "033" "0213" "033" "022" "01111" "012" "012" "042"
#> Prog_468 LT-HSC_120 Prog_432 HSPC_475 HSPC_481 HSPC_487 HSPC_493 HSPC_499 HSPC_505
#> "0411" "0413" "043" "022" "023" "0212" "022" "022" "042"
#> LT-HSC_121 HSPC_469 HSPC_476 HSPC_482 HSPC_488 HSPC_494 HSPC_500 HSPC_506 LT-HSC_122
#> "0213" "023" "0211" "022" "022" "022" "022" "022" "042"
#> HSPC_470 HSPC_477 HSPC_483 HSPC_489 HSPC_495 HSPC_501 HSPC_507 LT-HSC_123 HSPC_471
#> "022" "012" "022" "042" "043" "023" "022" "022" "022"
#> HSPC_478 HSPC_484 HSPC_490 HSPC_496 HSPC_502 HSPC_508 LT-HSC_124 HSPC_472 HSPC_479
#> "022" "0211" "031" "031" "032" "0131" "031" "032" "031"
#> HSPC_485 HSPC_491 HSPC_497 HSPC_503 HSPC_509 LT-HSC_125 HSPC_473 HSPC_480 HSPC_486
#> "012" "0412" "022" "012" "042" "031" "031" "032" "042"
#> HSPC_492 HSPC_498 HSPC_504 HSPC_510 LT-HSC_126 HSPC_474 Prog_475 Prog_481 Prog_487
#> "032" "031" "022" "0412" "032" "032" "0131" "033" "0131"
#> Prog_493 Prog_499 Prog_505 LT-HSC_127 Prog_469 Prog_476 Prog_482 Prog_488 Prog_494
#> "012" "012" "0131" "0212" "042" "012" "012" "0131" "043"
#> Prog_500 Prog_506 LT-HSC_128 Prog_470 Prog_477 Prog_483 Prog_489 Prog_495 Prog_501
#> "0131" "012" "031" "012" "0112" "043" "012" "032" "012"
#> Prog_507 LT-HSC_129 Prog_471 Prog_478 Prog_484 Prog_490 Prog_496 Prog_502 Prog_508
#> "0411" "0211" "012" "01113" "012" "043" "033" "0112" "01113"
#> LT-HSC_130 Prog_472 Prog_479 Prog_485 Prog_491 Prog_497 Prog_503 Prog_509 LT-HSC_131
#> "0132" "043" "012" "0132" "0131" "0411" "043" "031" "031"
#> Prog_473 Prog_480 Prog_486 Prog_492 Prog_498 Prog_504 Prog_510 LT-HSC_132 Prog_474
#> "012" "023" "012" "031" "0213" "012" "042" "014" "032"
#> HSPC_517 HSPC_523 HSPC_529 HSPC_535 HSPC_541 HSPC_547 LT-HSC_133 HSPC_511 HSPC_518
#> "023" "032" "0211" "022" "022" "032" "0212" "023" "022"
#> HSPC_524 HSPC_530 HSPC_536 HSPC_542 HSPC_548 LT-HSC_134 HSPC_512 HSPC_519 HSPC_525
#> "022" "022" "0211" "0211" "022" "023" "032" "0211" "023"
#> HSPC_531 HSPC_537 HSPC_543 HSPC_549 LT-HSC_135 HSPC_513 HSPC_520 HSPC_526 HSPC_532
#> "022" "042" "042" "022" "022" "0212" "042" "031" "042"
#> HSPC_538 HSPC_544 HSPC_550 LT-HSC_136 HSPC_514 HSPC_521 HSPC_527 HSPC_533 HSPC_539
#> "031" "012" "042" "023" "031" "022" "012" "032" "022"
#> HSPC_545 HSPC_551 LT-HSC_137 HSPC_515 HSPC_522 HSPC_528 HSPC_534 HSPC_540 HSPC_546
#> "022" "042" "022" "031" "022" "0413" "031" "032" "022"
#> HSPC_552 LT-HSC_138 HSPC_516 Prog_517 Prog_523 Prog_529 Prog_535 Prog_541 Prog_547
#> "042" "022" "032" "033" "0112" "0131" "0112" "0131" "0132"
#> LT-HSC_139 Prog_511 Prog_518 Prog_524 Prog_530 Prog_536 Prog_542 Prog_548 LT-HSC_140
#> "031" "031" "0413" "042" "012" "0112" "0413" "0112" "022"
#> Prog_512 Prog_519 Prog_525 Prog_531 Prog_537 Prog_543 Prog_549 LT-HSC_141 Prog_513
#> "0411" "042" "043" "0131" "022" "014" "0413" "0211" "033"
#> Prog_520 Prog_526 Prog_532 Prog_538 Prog_544 Prog_550 LT-HSC_142 Prog_514 Prog_521
#> "0131" "023" "022" "0212" "023" "012" "012" "012" "012"
#> Prog_527 Prog_533 Prog_539 Prog_545 Prog_551 LT-HSC_143 Prog_515 Prog_522 Prog_528
#> "012" "022" "0411" "014" "012" "0132" "043" "022" "014"
#> Prog_534 Prog_540 Prog_546 Prog_552 LT-HSC_144 Prog_516 HSPC_559 HSPC_565 HSPC_571
#> "043" "023" "023" "0412" "042" "01111" "022" "023" "031"
#> HSPC_577 HSPC_583 HSPC_589 LT-HSC_145 HSPC_553 HSPC_560 HSPC_566 HSPC_572 HSPC_578
#> "022" "0211" "022" "022" "0131" "022" "022" "023" "022"
#> HSPC_584 HSPC_590 LT-HSC_146 HSPC_554 HSPC_561 HSPC_567 HSPC_573 HSPC_579 HSPC_585
#> "022" "042" "031" "022" "0211" "031" "022" "031" "022"
#> HSPC_591 LT-HSC_147 HSPC_555 HSPC_562 HSPC_568 HSPC_574 HSPC_580 HSPC_586 HSPC_592
#> "023" "022" "022" "023" "022" "012" "032" "032" "031"
#> LT-HSC_148 HSPC_556 HSPC_563 HSPC_569 HSPC_575 HSPC_581 HSPC_587 HSPC_593 LT-HSC_149
#> "042" "032" "031" "0413" "031" "0211" "0211" "022" "022"
#> HSPC_557 HSPC_564 HSPC_570 HSPC_576 HSPC_582 HSPC_588 HSPC_594 LT-HSC_150 HSPC_558
#> "032" "0211" "0211" "022" "022" "0212" "022" "022" "0211"
#> Prog_559 Prog_565 Prog_571 Prog_577 Prog_583 Prog_589 LT-HSC_151 Prog_553 Prog_560
#> "012" "012" "012" "012" "023" "023" "032" "043" "012"
#> Prog_566 Prog_572 Prog_578 Prog_584 Prog_590 LT-HSC_152 Prog_554 Prog_561 Prog_567
#> "014" "032" "0413" "012" "012" "022" "031" "042" "012"
#> Prog_573 Prog_579 Prog_585 Prog_591 LT-HSC_153 Prog_555 Prog_562 Prog_568 Prog_574
#> "023" "012" "033" "023" "022" "031" "0112" "033" "012"
#> Prog_580 Prog_586 Prog_592 LT-HSC_154 Prog_556 Prog_563 Prog_569 Prog_575 Prog_581
#> "031" "043" "01111" "0211" "033" "0213" "0131" "01113" "012"
#> Prog_587 Prog_593 LT-HSC_155 Prog_557 Prog_564 Prog_570 Prog_576 Prog_582 Prog_588
#> "0132" "012" "0211" "012" "031" "0411" "014" "012" "031"
#> Prog_594 LT-HSC_156 Prog_558 HSPC_601 HSPC_607 HSPC_613 HSPC_619 HSPC_625 HSPC_631
#> "033" "012" "031" "042" "023" "042" "0211" "022" "0412"
#> LT-HSC_157 HSPC_595 HSPC_602 HSPC_608 HSPC_614 HSPC_620 HSPC_626 HSPC_632 LT-HSC_158
#> "023" "031" "022" "022" "042" "022" "023" "0211" "022"
#> HSPC_596 HSPC_603 HSPC_609 HSPC_615 HSPC_621 HSPC_627 HSPC_633 LT-HSC_159 HSPC_597
#> "042" "032" "023" "023" "0211" "042" "023" "0411" "042"
#> HSPC_604 HSPC_610 HSPC_616 HSPC_622 HSPC_628 HSPC_634 LT-HSC_160 HSPC_598 HSPC_605
#> "022" "022" "0211" "0211" "042" "042" "023" "042" "0213"
#> HSPC_611 HSPC_617 HSPC_623 HSPC_629 HSPC_635 LT-HSC_161 HSPC_599 HSPC_606 HSPC_612
#> "0211" "032" "042" "042" "042" "023" "022" "031" "031"
#> HSPC_618 HSPC_624 HSPC_630 HSPC_636 LT-HSC_162 HSPC_600 Prog_601 Prog_607 Prog_613
#> "022" "032" "022" "031" "023" "023" "0211" "012" "033"
#> Prog_619 Prog_625 Prog_631 LT-HSC_163 Prog_595 Prog_602 Prog_608 Prog_614 Prog_620
#> "022" "0413" "032" "022" "022" "0132" "0112" "0132" "042"
#> Prog_626 Prog_632 LT-HSC_164 Prog_596 Prog_603 Prog_609 Prog_615 Prog_621 Prog_627
#> "012" "012" "031" "033" "0112" "012" "0411" "012" "031"
#> Prog_633 LT-HSC_165 Prog_597 Prog_604 Prog_610 Prog_616 Prog_622 Prog_628 Prog_634
#> "043" "022" "033" "033" "033" "01112" "012" "012" "043"
#> LT-HSC_166 Prog_598 Prog_605 Prog_611 Prog_617 Prog_623 Prog_629 Prog_635 LT-HSC_167
#> "042" "012" "014" "033" "031" "0132" "012" "033" "022"
#> Prog_599 Prog_606 Prog_612 Prog_618 Prog_624 Prog_630 Prog_636 LT-HSC_168 Prog_600
#> "012" "031" "0131" "012" "012" "0131" "0213" "0131" "012"
#> HSPC_643 HSPC_649 HSPC_655 HSPC_661 HSPC_667 HSPC_673 LT-HSC_169 HSPC_637 HSPC_644
#> "042" "032" "0212" "042" "022" "022" "023" "031" "0132"
#> HSPC_650 HSPC_656 HSPC_662 HSPC_668 HSPC_674 LT-HSC_170 HSPC_638 HSPC_645 HSPC_651
#> "0211" "022" "022" "032" "031" "042" "0132" "032" "0411"
#> HSPC_657 HSPC_663 HSPC_669 HSPC_675 LT-HSC_171 HSPC_639 HSPC_646 HSPC_652 HSPC_658
#> "023" "0412" "022" "0212" "042" "031" "031" "042" "0412"
#> HSPC_664 HSPC_670 HSPC_676 LT-HSC_172 HSPC_640 HSPC_647 HSPC_653 HSPC_659 HSPC_665
#> "032" "023" "022" "022" "031" "022" "0211" "0211" "042"
#> HSPC_671 HSPC_677 LT-HSC_173 HSPC_641 HSPC_648 HSPC_654 HSPC_660 HSPC_666 HSPC_672
#> "032" "023" "022" "031" "022" "042" "043" "0413" "032"
#> HSPC_678 LT-HSC_174 HSPC_642 Prog_643 Prog_649 Prog_655 Prog_661 Prog_667 Prog_673
#> "022" "031" "0211" "0412" "0112" "0112" "0131" "043" "042"
#> LT-HSC_175 Prog_637 Prog_644 Prog_650 Prog_656 Prog_662 Prog_668 Prog_674 LT-HSC_176
#> "0211" "014" "033" "012" "033" "033" "023" "033" "022"
#> Prog_638 Prog_645 Prog_651 Prog_657 Prog_663 Prog_669 Prog_675 LT-HSC_177 Prog_639
#> "0112" "043" "031" "01112" "0112" "023" "012" "022" "014"
#> Prog_646 Prog_652 Prog_658 Prog_664 Prog_670 Prog_676 LT-HSC_178 Prog_640 Prog_647
#> "012" "012" "012" "023" "012" "033" "0211" "01113" "043"
#> Prog_653 Prog_659 Prog_665 Prog_671 Prog_677 LT-HSC_179 Prog_641 Prog_648 Prog_654
#> "043" "033" "031" "031" "0112" "031" "023" "042" "0132"
#> Prog_660 Prog_666 Prog_672 Prog_678 LT-HSC_180 Prog_642 HSPC_685 HSPC_691 HSPC_697
#> "031" "033" "031" "0411" "043" "032" "0213" "0212" "0413"
#> HSPC_703 HSPC_709 HSPC_715 LT-HSC_181 HSPC_679 HSPC_686 HSPC_692 HSPC_698 HSPC_704
#> "022" "023" "0212" "0212" "031" "0211" "023" "022" "022"
#> HSPC_710 HSPC_716 LT-HSC_182 HSPC_680 HSPC_687 HSPC_693 HSPC_699 HSPC_705 HSPC_711
#> "0211" "022" "0213" "022" "023" "023" "022" "012" "0211"
#> HSPC_717 LT-HSC_183 HSPC_681 HSPC_688 HSPC_694 HSPC_700 HSPC_706 HSPC_712 HSPC_718
#> "0412" "031" "042" "0211" "0211" "0413" "033" "0211" "0211"
#> LT-HSC_184 HSPC_682 HSPC_689 HSPC_695 HSPC_701 HSPC_707 HSPC_713 HSPC_719 LT-HSC_185
#> "031" "012" "022" "0132" "042" "042" "0212" "022" "023"
#> HSPC_683 HSPC_690 HSPC_696 HSPC_702 HSPC_708 HSPC_714 HSPC_720 LT-HSC_186 HSPC_684
#> "0412" "022" "043" "022" "031" "022" "012" "0211" "023"
#> Prog_685 Prog_691 Prog_697 Prog_703 Prog_709 Prog_715 LT-HSC_187 Prog_679 Prog_686
#> "012" "0213" "0112" "043" "014" "012" "031" "012" "0413"
#> Prog_692 Prog_698 Prog_704 Prog_710 Prog_716 LT-HSC_188 Prog_680 Prog_687 Prog_693
#> "032" "0131" "031" "031" "033" "031" "012" "012" "012"
#> Prog_699 Prog_705 Prog_711 Prog_717 LT-HSC_189 Prog_681 Prog_688 Prog_694 Prog_700
#> "012" "012" "033" "012" "0211" "0131" "0112" "033" "01112"
#> Prog_706 Prog_712 Prog_718 LT-HSC_190 Prog_682 Prog_689 Prog_695 Prog_701 Prog_707
#> "0131" "0132" "012" "023" "0132" "033" "01111" "01112" "033"
#> Prog_713 Prog_719 LT-HSC_191 Prog_683 Prog_690 Prog_696 Prog_702 Prog_708 Prog_714
#> "0131" "0112" "031" "023" "033" "0411" "014" "014" "014"
#> Prog_720 LT-HSC_192 Prog_684 HSPC_727 HSPC_733 HSPC_739 HSPC_745 HSPC_751 HSPC_757
#> "014" "012" "032" "022" "022" "023" "023" "022" "022"
#> LT-HSC_193 HSPC_721 HSPC_728 HSPC_734 HSPC_740 HSPC_746 HSPC_752 HSPC_758 LT-HSC_194
#> "022" "023" "0213" "012" "022" "023" "023" "032" "022"
#> HSPC_722 HSPC_729 HSPC_735 HSPC_741 HSPC_747 HSPC_753 HSPC_759 LT-HSC_195 HSPC_723
#> "031" "031" "042" "0211" "022" "031" "032" "032" "032"
#> HSPC_730 HSPC_736 HSPC_742 HSPC_748 HSPC_754 HSPC_760 LT-HSC_196 HSPC_724 HSPC_731
#> "031" "032" "032" "022" "0213" "042" "0211" "032" "0412"
#> HSPC_737 HSPC_743 HSPC_749 HSPC_755 HSPC_761 LT-HSC_197 HSPC_725 HSPC_732 HSPC_738
#> "012" "031" "022" "031" "032" "022" "023" "032" "022"
#> HSPC_744 HSPC_750 HSPC_756 HSPC_762 LT-HSC_198 HSPC_726 Prog_727 Prog_733 Prog_739
#> "042" "031" "022" "042" "022" "0213" "012" "033" "0412"
#> Prog_745 Prog_751 Prog_757 LT-HSC_199 Prog_721 Prog_728 Prog_734 Prog_740 Prog_746
#> "033" "033" "0412" "0211" "014" "032" "014" "033" "0411"
#> Prog_752 Prog_758 LT-HSC_200 Prog_722 Prog_729 Prog_735 Prog_741 Prog_747 Prog_753
#> "033" "033" "022" "014" "023" "012" "0213" "033" "0131"
#> Prog_759 LT-HSC_201 Prog_723 Prog_730 Prog_736 Prog_742 Prog_748 Prog_754 Prog_760
#> "012" "022" "0112" "0112" "0131" "0213" "0413" "0131" "012"
#> LT-HSC_202 Prog_724 Prog_731 Prog_737 Prog_743 Prog_749 Prog_755 Prog_761 LT-HSC_203
#> "031" "033" "0112" "031" "012" "043" "0213" "0412" "0213"
#> Prog_725 Prog_732 Prog_738 Prog_744 Prog_750 Prog_756 Prog_762 LT-HSC_204 Prog_726
#> "031" "043" "033" "033" "0413" "043" "031" "032" "031"
#> HSPC_769 HSPC_775 HSPC_781 HSPC_787 HSPC_793 HSPC_799 LT-HSC_205 HSPC_763 HSPC_770
#> "023" "023" "022" "023" "0212" "023" "023" "0212" "042"
#> HSPC_776 HSPC_782 HSPC_788 HSPC_794 HSPC_800 LT-HSC_206 HSPC_764 HSPC_771 HSPC_777
#> "023" "022" "023" "032" "0413" "022" "022" "032" "032"
#> HSPC_783 HSPC_789 HSPC_795 HSPC_801 LT-HSC_207 HSPC_765 HSPC_772 HSPC_778 HSPC_784
#> "022" "042" "032" "031" "042" "023" "042" "031" "031"
#> HSPC_790 HSPC_796 HSPC_802 LT-HSC_208 HSPC_766 HSPC_773 HSPC_779 HSPC_785 HSPC_791
#> "042" "012" "022" "022" "012" "032" "042" "031" "043"
#> HSPC_797 HSPC_803 LT-HSC_209 HSPC_767 HSPC_774 HSPC_780 HSPC_786 HSPC_792 HSPC_798
#> "032" "022" "0211" "012" "032" "031" "031" "0213" "022"
#> HSPC_804 LT-HSC_210 HSPC_768 Prog_769 Prog_775 Prog_781 Prog_787 Prog_793 Prog_799
#> "022" "022" "023" "012" "033" "012" "043" "0132" "033"
#> LT-HSC_211 Prog_763 Prog_770 Prog_776 Prog_782 Prog_788 Prog_794 Prog_800 LT-HSC_212
#> "042" "012" "014" "0112" "012" "0112" "012" "012" "031"
#> Prog_764 Prog_771 Prog_777 Prog_783 Prog_789 Prog_795 Prog_801 LT-HSC_213 Prog_765
#> "012" "014" "012" "014" "012" "012" "0132" "022" "0131"
#> Prog_772 Prog_778 Prog_784 Prog_790 Prog_796 Prog_802 LT-HSC_214 Prog_766 Prog_773
#> "012" "023" "032" "0112" "0412" "014" "031" "0212" "0212"
#> Prog_779 Prog_785 Prog_791 Prog_797 Prog_803 LT-HSC_215 Prog_767 Prog_774 Prog_780
#> "0131" "033" "012" "031" "043" "032" "01113" "012" "01113"
#> Prog_786 Prog_792 Prog_798 Prog_804 LT-HSC_216 Prog_768 HSPC_811 HSPC_817 HSPC_823
#> "01113" "0131" "0131" "012" "0411" "012" "0212" "0212" "0212"
#> HSPC_829 HSPC_835 HSPC_841 HSPC_847 HSPC_805 HSPC_812 HSPC_818 HSPC_824 HSPC_830
#> "0213" "032" "043" "023" "0212" "012" "031" "031" "0212"
#> HSPC_836 HSPC_842 HSPC_848 HSPC_806 HSPC_813 HSPC_819 HSPC_825 HSPC_831 HSPC_837
#> "023" "023" "022" "023" "012" "042" "031" "031" "0412"
#> HSPC_843 HSPC_849 HSPC_807 HSPC_814 HSPC_820 HSPC_826 HSPC_832 HSPC_838 HSPC_844
#> "031" "022" "012" "0413" "012" "031" "032" "032" "022"
#> HSPC_850 HSPC_808 HSPC_815 HSPC_821 HSPC_827 HSPC_833 HSPC_839 HSPC_845 HSPC_851
#> "0211" "012" "032" "042" "022" "012" "0413" "031" "023"
#> HSPC_809 HSPC_816 HSPC_822 HSPC_828 HSPC_834 HSPC_840 HSPC_846 HSPC_852 HSPC_810
#> "022" "042" "031" "032" "032" "022" "042" "022" "022"
#> Prog_811 Prog_817 Prog_823 Prog_829 Prog_835 Prog_841 Prog_847 Prog_805 Prog_812
#> "014" "0132" "031" "012" "014" "0411" "012" "042" "023"
#> Prog_818 Prog_824 Prog_830 Prog_836 Prog_842 Prog_848 Prog_806 Prog_813 Prog_819
#> "014" "012" "0112" "0131" "014" "022" "033" "0112" "0112"
#> Prog_825 Prog_831 Prog_837 Prog_843 Prog_849 Prog_807 Prog_814 Prog_820 Prog_826
#> "01113" "014" "014" "0131" "042" "014" "0112" "0132" "0112"
#> Prog_832 Prog_838 Prog_844 Prog_850 Prog_808 Prog_815 Prog_821 Prog_827 Prog_833
#> "012" "0112" "014" "014" "012" "014" "01113" "033" "012"
#> Prog_839 Prog_845 Prog_851 Prog_809 Prog_816 Prog_822 Prog_828 Prog_834 Prog_840
#> "0131" "0131" "033" "0132" "012" "01113" "01113" "012" "012"
#> Prog_846 Prog_852 Prog_810
#> "012" "0411" "0131"
get_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 1938))
#> HSPC_007 HSPC_013 HSPC_019 HSPC_025 HSPC_031 HSPC_037 LT-HSC_001 HSPC_001 HSPC_008
#> "0213" "023" "0211" "042" "032" "042" "023" "012" "042"
#> HSPC_014 HSPC_020 HSPC_026 HSPC_032 HSPC_038 LT-HSC_002 HSPC_002 HSPC_009 HSPC_015
#> "022" "042" "0412" "0211" "022" "042" "022" "022" "023"
#> HSPC_021 HSPC_027 HSPC_033 HSPC_039 LT-HSC_003 HSPC_003 HSPC_010 HSPC_016 HSPC_022
#> "022" "033" "031" "0211" "023" "012" "0213" "012" "0412"
#> HSPC_028 HSPC_034 HSPC_040 LT-HSC_004 HSPC_004 HSPC_011 HSPC_017 HSPC_023 HSPC_029
#> "031" "012" "032" "022" "031" "042" "022" "042" "0211"
#> HSPC_035 HSPC_041 LT-HSC_005 HSPC_005 HSPC_012 HSPC_018 HSPC_024 HSPC_030 HSPC_036
#> "022" "042" "0211" "0211" "042" "042" "022" "031" "012"
#> HSPC_042 LT-HSC_006 HSPC_006 Prog_007 Prog_013 Prog_019 Prog_025 Prog_031 Prog_037
#> "032" "022" "0412" "012" "012" "0131" "0411" "033" "033"
#> LT-HSC_007 Prog_001 Prog_008 Prog_014 Prog_020 Prog_026 Prog_032 Prog_038 LT-HSC_008
#> "042" "043" "0111" "0112" "014" "033" "014" "014" "031"
#> Prog_002 Prog_009 Prog_015 Prog_021 Prog_027 Prog_033 Prog_039 LT-HSC_009 Prog_003
#> "012" "0111" "012" "014" "012" "0112" "0111" "022" "012"
#> Prog_010 Prog_016 Prog_022 Prog_028 Prog_034 Prog_040 LT-HSC_010 Prog_004 Prog_011
#> "0412" "0411" "0411" "0112" "0211" "042" "0412" "033" "014"
#> Prog_017 Prog_023 Prog_029 Prog_035 Prog_041 LT-HSC_011 Prog_005 Prog_012 Prog_018
#> "012" "012" "014" "0111" "0213" "0213" "0213" "022" "022"
#> Prog_024 Prog_030 Prog_036 Prog_042 LT-HSC_012 Prog_006 HSPC_049 HSPC_055 HSPC_061
#> "014" "0411" "0412" "0411" "0411" "0111" "031" "042" "042"
#> HSPC_067 HSPC_073 HSPC_079 LT-HSC_013 HSPC_043 HSPC_050 HSPC_056 HSPC_062 HSPC_068
#> "042" "022" "0412" "022" "042" "043" "022" "0413" "022"
#> HSPC_074 HSPC_080 LT-HSC_014 HSPC_044 HSPC_051 HSPC_057 HSPC_063 HSPC_069 HSPC_075
#> "022" "032" "022" "043" "032" "022" "0412" "032" "022"
#> HSPC_081 LT-HSC_015 HSPC_045 HSPC_052 HSPC_058 HSPC_064 HSPC_070 HSPC_076 HSPC_082
#> "032" "022" "042" "043" "031" "0413" "033" "032" "042"
#> LT-HSC_016 HSPC_046 HSPC_053 HSPC_059 HSPC_065 HSPC_071 HSPC_077 HSPC_083 LT-HSC_017
#> "022" "032" "012" "0211" "032" "0413" "012" "022" "022"
#> HSPC_047 HSPC_054 HSPC_060 HSPC_066 HSPC_072 HSPC_078 HSPC_084 LT-HSC_018 HSPC_048
#> "023" "031" "031" "031" "0413" "043" "042" "022" "032"
#> Prog_049 Prog_055 Prog_061 Prog_067 Prog_073 Prog_079 LT-HSC_019 Prog_043 Prog_050
#> "0111" "012" "0112" "014" "032" "0111" "0211" "0132" "012"
#> Prog_056 Prog_062 Prog_068 Prog_074 Prog_080 LT-HSC_020 Prog_044 Prog_051 Prog_057
#> "012" "042" "032" "0411" "043" "031" "032" "014" "0131"
#> Prog_063 Prog_069 Prog_075 Prog_081 LT-HSC_021 Prog_045 Prog_052 Prog_058 Prog_064
#> "043" "012" "012" "0111" "0413" "0132" "043" "014" "014"
#> Prog_070 Prog_076 Prog_082 LT-HSC_022 Prog_046 Prog_053 Prog_059 Prog_065 Prog_071
#> "0412" "014" "0111" "022" "0112" "0112" "012" "0131" "012"
#> Prog_077 Prog_083 LT-HSC_023 Prog_047 Prog_054 Prog_060 Prog_066 Prog_072 Prog_078
#> "012" "012" "022" "012" "0411" "0213" "014" "033" "014"
#> Prog_084 LT-HSC_024 Prog_048 HSPC_091 HSPC_097 HSPC_103 HSPC_109 HSPC_115 HSPC_121
#> "0112" "033" "032" "0212" "023" "022" "043" "022" "023"
#> LT-HSC_025 HSPC_085 HSPC_092 HSPC_098 HSPC_104 HSPC_110 HSPC_116 HSPC_122 LT-HSC_026
#> "0212" "042" "0212" "043" "023" "043" "0211" "031" "022"
#> HSPC_086 HSPC_093 HSPC_099 HSPC_105 HSPC_111 HSPC_117 HSPC_123 LT-HSC_027 HSPC_087
#> "0211" "0211" "042" "022" "022" "042" "022" "023" "022"
#> HSPC_094 HSPC_100 HSPC_106 HSPC_112 HSPC_118 HSPC_124 LT-HSC_028 HSPC_088 HSPC_095
#> "012" "032" "022" "0211" "031" "0211" "032" "032" "022"
#> HSPC_101 HSPC_107 HSPC_113 HSPC_119 HSPC_125 LT-HSC_029 HSPC_089 HSPC_096 HSPC_102
#> "012" "042" "023" "023" "031" "0212" "032" "043" "012"
#> HSPC_108 HSPC_114 HSPC_120 HSPC_126 LT-HSC_030 HSPC_090 Prog_091 Prog_097 Prog_103
#> "031" "032" "031" "032" "0212" "012" "0111" "012" "012"
#> Prog_109 Prog_115 Prog_121 LT-HSC_031 Prog_085 Prog_092 Prog_098 Prog_104 Prog_110
#> "0412" "014" "0213" "032" "012" "033" "0112" "0211" "0111"
#> Prog_116 Prog_122 LT-HSC_032 Prog_086 Prog_093 Prog_099 Prog_105 Prog_111 Prog_117
#> "012" "033" "0111" "0212" "012" "012" "012" "014" "0132"
#> Prog_123 LT-HSC_033 Prog_087 Prog_094 Prog_100 Prog_106 Prog_112 Prog_118 Prog_124
#> "012" "031" "012" "014" "0112" "031" "0111" "0412" "033"
#> LT-HSC_034 Prog_088 Prog_095 Prog_101 Prog_107 Prog_113 Prog_119 Prog_125 LT-HSC_035
#> "031" "043" "0112" "0131" "0111" "012" "0111" "031" "0212"
#> Prog_089 Prog_096 Prog_102 Prog_108 Prog_114 Prog_120 Prog_126 LT-HSC_036 Prog_090
#> "014" "032" "031" "0411" "0413" "023" "014" "033" "0112"
#> HSPC_133 HSPC_139 HSPC_145 HSPC_151 HSPC_157 HSPC_163 LT-HSC_037 HSPC_127 HSPC_134
#> "022" "022" "023" "042" "043" "023" "023" "0412" "023"
#> HSPC_140 HSPC_146 HSPC_152 HSPC_158 HSPC_164 LT-HSC_038 HSPC_128 HSPC_135 HSPC_141
#> "023" "0412" "022" "042" "022" "023" "023" "031" "022"
#> HSPC_147 HSPC_153 HSPC_159 HSPC_165 LT-HSC_039 HSPC_129 HSPC_136 HSPC_142 HSPC_148
#> "023" "022" "042" "043" "022" "0211" "042" "042" "043"
#> HSPC_154 HSPC_160 HSPC_166 LT-HSC_040 HSPC_130 HSPC_137 HSPC_143 HSPC_149 HSPC_155
#> "043" "0211" "042" "022" "042" "0211" "022" "022" "023"
#> HSPC_161 HSPC_167 LT-HSC_041 HSPC_131 HSPC_138 HSPC_144 HSPC_150 HSPC_156 HSPC_162
#> "042" "023" "022" "022" "012" "031" "0211" "012" "032"
#> HSPC_168 LT-HSC_042 HSPC_132 Prog_133 Prog_139 Prog_145 Prog_151 Prog_157 Prog_163
#> "0413" "022" "0132" "012" "0112" "012" "032" "012" "0111"
#> LT-HSC_043 Prog_127 Prog_134 Prog_140 Prog_146 Prog_152 Prog_158 Prog_164 LT-HSC_044
#> "0132" "032" "043" "0111" "0111" "043" "0111" "0213" "043"
#> Prog_128 Prog_135 Prog_141 Prog_147 Prog_153 Prog_159 Prog_165 LT-HSC_045 Prog_129
#> "012" "032" "0132" "0211" "012" "0412" "043" "0412" "0131"
#> Prog_136 Prog_142 Prog_148 Prog_154 Prog_160 Prog_166 LT-HSC_046 Prog_130 Prog_137
#> "0132" "033" "023" "033" "022" "014" "031" "0131" "012"
#> Prog_143 Prog_149 Prog_155 Prog_161 Prog_167 LT-HSC_047 Prog_131 Prog_138 Prog_144
#> "0131" "0413" "012" "033" "012" "0213" "033" "0211" "043"
#> Prog_150 Prog_156 Prog_162 Prog_168 LT-HSC_048 Prog_132 HSPC_175 HSPC_181 HSPC_187
#> "0131" "0212" "0412" "0131" "023" "0131" "042" "022" "022"
#> HSPC_193 HSPC_199 HSPC_205 LT-HSC_049 HSPC_169 HSPC_176 HSPC_182 HSPC_188 HSPC_194
#> "033" "031" "022" "022" "042" "022" "023" "0211" "0211"
#> HSPC_200 HSPC_206 LT-HSC_050 HSPC_170 HSPC_177 HSPC_183 HSPC_189 HSPC_195 HSPC_201
#> "022" "012" "022" "023" "022" "033" "031" "012" "0211"
#> HSPC_207 LT-HSC_051 HSPC_171 HSPC_178 HSPC_184 HSPC_190 HSPC_196 HSPC_202 HSPC_208
#> "032" "022" "022" "031" "0212" "0413" "042" "032" "022"
#> LT-HSC_052 HSPC_172 HSPC_179 HSPC_185 HSPC_191 HSPC_197 HSPC_203 HSPC_209 LT-HSC_053
#> "012" "012" "012" "023" "022" "0211" "042" "0211" "0211"
#> HSPC_173 HSPC_180 HSPC_186 HSPC_192 HSPC_198 HSPC_204 HSPC_210 LT-HSC_054 HSPC_174
#> "023" "043" "033" "022" "031" "0412" "043" "022" "031"
#> Prog_175 Prog_181 Prog_187 Prog_193 Prog_199 Prog_205 LT-HSC_055 Prog_169 Prog_176
#> "0411" "0211" "033" "042" "032" "0413" "0132" "0211" "012"
#> Prog_182 Prog_188 Prog_194 Prog_200 Prog_206 LT-HSC_056 Prog_170 Prog_177 Prog_183
#> "043" "014" "023" "043" "012" "0131" "0111" "042" "0132"
#> Prog_189 Prog_195 Prog_201 Prog_207 LT-HSC_057 Prog_171 Prog_178 Prog_184 Prog_190
#> "012" "042" "0412" "014" "031" "042" "0112" "0131" "012"
#> Prog_196 Prog_202 Prog_208 LT-HSC_058 Prog_172 Prog_179 Prog_185 Prog_191 Prog_197
#> "0111" "0213" "033" "032" "014" "0131" "0111" "033" "0131"
#> Prog_203 Prog_209 LT-HSC_059 Prog_173 Prog_180 Prog_186 Prog_192 Prog_198 Prog_204
#> "0132" "0131" "0212" "043" "032" "012" "012" "0211" "023"
#> Prog_210 LT-HSC_060 Prog_174 HSPC_217 HSPC_223 HSPC_229 HSPC_235 HSPC_241 HSPC_247
#> "032" "0131" "0213" "0212" "022" "023" "022" "0211" "023"
#> LT-HSC_061 HSPC_211 HSPC_218 HSPC_224 HSPC_230 HSPC_236 HSPC_242 HSPC_248 LT-HSC_062
#> "0212" "042" "022" "022" "042" "043" "023" "022" "023"
#> HSPC_212 HSPC_219 HSPC_225 HSPC_231 HSPC_237 HSPC_243 HSPC_249 LT-HSC_063 HSPC_213
#> "023" "042" "022" "023" "022" "0412" "022" "033" "0413"
#> HSPC_220 HSPC_226 HSPC_232 HSPC_238 HSPC_244 HSPC_250 LT-HSC_064 HSPC_214 HSPC_221
#> "022" "0211" "023" "0212" "032" "0413" "0112" "012" "031"
#> HSPC_227 HSPC_233 HSPC_239 HSPC_245 HSPC_251 LT-HSC_065 HSPC_215 HSPC_222 HSPC_228
#> "022" "042" "022" "022" "0413" "031" "0412" "042" "023"
#> HSPC_234 HSPC_240 HSPC_246 HSPC_252 LT-HSC_066 HSPC_216 Prog_217 Prog_223 Prog_229
#> "0211" "031" "022" "0213" "031" "012" "0111" "042" "0111"
#> Prog_235 Prog_241 Prog_247 LT-HSC_067 Prog_211 Prog_218 Prog_224 Prog_230 Prog_236
#> "023" "022" "033" "0213" "0112" "012" "0132" "0413" "012"
#> Prog_242 Prog_248 LT-HSC_068 Prog_212 Prog_219 Prog_225 Prog_231 Prog_237 Prog_243
#> "014" "043" "012" "014" "0213" "033" "0132" "042" "0131"
#> Prog_249 LT-HSC_069 Prog_213 Prog_220 Prog_226 Prog_232 Prog_238 Prog_244 Prog_250
#> "0111" "032" "043" "0213" "031" "033" "012" "032" "014"
#> LT-HSC_070 Prog_214 Prog_221 Prog_227 Prog_233 Prog_239 Prog_245 Prog_251 LT-HSC_071
#> "043" "0413" "0111" "0132" "012" "0111" "012" "0212" "032"
#> Prog_215 Prog_222 Prog_228 Prog_234 Prog_240 Prog_246 Prog_252 LT-HSC_072 Prog_216
#> "0111" "032" "0131" "012" "012" "033" "032" "012" "0111"
#> HSPC_259 HSPC_265 HSPC_271 HSPC_277 HSPC_283 HSPC_289 LT-HSC_073 HSPC_253 HSPC_260
#> "023" "022" "0412" "023" "022" "022" "023" "0413" "0211"
#> HSPC_266 HSPC_272 HSPC_278 HSPC_284 HSPC_290 LT-HSC_074 HSPC_254 HSPC_261 HSPC_267
#> "022" "0211" "042" "0211" "0413" "022" "022" "0132" "031"
#> HSPC_273 HSPC_279 HSPC_285 HSPC_291 LT-HSC_075 HSPC_255 HSPC_262 HSPC_268 HSPC_274
#> "0211" "043" "012" "033" "031" "032" "0212" "012" "022"
#> HSPC_280 HSPC_286 HSPC_292 LT-HSC_076 HSPC_256 HSPC_263 HSPC_269 HSPC_275 HSPC_281
#> "0412" "042" "0412" "042" "0112" "0412" "0132" "0131" "023"
#> HSPC_287 HSPC_293 LT-HSC_077 HSPC_257 HSPC_264 HSPC_270 HSPC_276 HSPC_282 HSPC_288
#> "0413" "0412" "023" "0413" "022" "032" "032" "012" "012"
#> HSPC_294 LT-HSC_078 HSPC_258 Prog_259 Prog_265 Prog_271 Prog_277 Prog_283 Prog_289
#> "0413" "022" "012" "031" "0112" "033" "031" "042" "0412"
#> LT-HSC_079 Prog_253 Prog_260 Prog_266 Prog_272 Prog_278 Prog_284 Prog_290 LT-HSC_080
#> "0211" "014" "012" "012" "012" "0112" "014" "0112" "032"
#> Prog_254 Prog_261 Prog_267 Prog_273 Prog_279 Prog_285 Prog_291 LT-HSC_081 Prog_255
#> "0112" "014" "0131" "0131" "0111" "014" "0411" "012" "012"
#> Prog_262 Prog_268 Prog_274 Prog_280 Prog_286 Prog_292 LT-HSC_082 Prog_256 Prog_263
#> "012" "012" "014" "033" "0112" "012" "032" "042" "0131"
#> Prog_269 Prog_275 Prog_281 Prog_287 Prog_293 LT-HSC_083 Prog_257 Prog_264 Prog_270
#> "0112" "012" "014" "0131" "033" "0212" "0213" "023" "0131"
#> Prog_276 Prog_282 Prog_288 Prog_294 LT-HSC_084 Prog_258 HSPC_301 HSPC_307 HSPC_313
#> "012" "0111" "0112" "012" "033" "0132" "023" "022" "042"
#> HSPC_319 HSPC_325 HSPC_331 LT-HSC_085 HSPC_295 HSPC_302 HSPC_308 HSPC_314 HSPC_320
#> "0212" "022" "022" "022" "0413" "023" "043" "042" "043"
#> HSPC_326 HSPC_332 LT-HSC_086 HSPC_296 HSPC_303 HSPC_309 HSPC_315 HSPC_321 HSPC_327
#> "022" "012" "042" "022" "012" "022" "022" "042" "012"
#> HSPC_333 LT-HSC_087 HSPC_297 HSPC_304 HSPC_310 HSPC_316 HSPC_322 HSPC_328 HSPC_334
#> "012" "0212" "022" "032" "022" "023" "031" "042" "022"
#> LT-HSC_088 HSPC_298 HSPC_305 HSPC_311 HSPC_317 HSPC_323 HSPC_329 HSPC_335 LT-HSC_089
#> "043" "032" "0412" "0212" "023" "031" "042" "022" "022"
#> HSPC_299 HSPC_306 HSPC_312 HSPC_318 HSPC_324 HSPC_330 HSPC_336 LT-HSC_090 HSPC_300
#> "033" "033" "0413" "022" "031" "031" "022" "032" "012"
#> Prog_301 Prog_307 Prog_313 Prog_319 Prog_325 Prog_331 LT-HSC_091 Prog_295 Prog_302
#> "0411" "0412" "0413" "0132" "012" "012" "0111" "0412" "0212"
#> Prog_308 Prog_314 Prog_320 Prog_326 Prog_332 LT-HSC_092 Prog_296 Prog_303 Prog_309
#> "012" "033" "012" "0111" "012" "0212" "012" "022" "022"
#> Prog_315 Prog_321 Prog_327 Prog_333 LT-HSC_093 Prog_297 Prog_304 Prog_310 Prog_316
#> "0411" "0411" "012" "043" "042" "043" "012" "0412" "0411"
#> Prog_322 Prog_328 Prog_334 LT-HSC_094 Prog_298 Prog_305 Prog_311 Prog_317 Prog_323
#> "043" "0411" "014" "042" "014" "0413" "043" "0212" "0411"
#> Prog_329 Prog_335 LT-HSC_095 Prog_299 Prog_306 Prog_312 Prog_318 Prog_324 Prog_330
#> "0411" "0413" "0111" "0112" "022" "0111" "0111" "0112" "0132"
#> Prog_336 LT-HSC_096 Prog_300 HSPC_343 HSPC_349 HSPC_355 HSPC_361 HSPC_367 HSPC_373
#> "0132" "012" "0131" "0132" "031" "0213" "023" "022" "023"
#> LT-HSC_097 HSPC_337 HSPC_344 HSPC_350 HSPC_356 HSPC_362 HSPC_368 HSPC_374 LT-HSC_098
#> "0212" "022" "0412" "022" "043" "0411" "042" "032" "0112"
#> HSPC_338 HSPC_345 HSPC_351 HSPC_357 HSPC_363 HSPC_369 HSPC_375 LT-HSC_099 HSPC_339
#> "0111" "043" "043" "0211" "022" "0211" "0211" "023" "032"
#> HSPC_346 HSPC_352 HSPC_358 HSPC_364 HSPC_370 HSPC_376 LT-HSC_100 HSPC_340 HSPC_347
#> "012" "0412" "042" "042" "0131" "042" "0111" "0213" "0211"
#> HSPC_353 HSPC_359 HSPC_365 HSPC_371 HSPC_377 LT-HSC_101 HSPC_341 HSPC_348 HSPC_354
#> "012" "032" "023" "012" "0413" "0411" "012" "033" "022"
#> HSPC_360 HSPC_366 HSPC_372 HSPC_378 LT-HSC_102 HSPC_342 Prog_343 Prog_349 Prog_355
#> "042" "0213" "042" "0212" "0111" "0131" "0132" "0411" "0413"
#> Prog_361 Prog_367 Prog_373 LT-HSC_103 Prog_337 Prog_344 Prog_350 Prog_356 Prog_362
#> "014" "0131" "0111" "0132" "0111" "0211" "014" "0112" "0412"
#> Prog_368 Prog_374 LT-HSC_104 Prog_338 Prog_345 Prog_351 Prog_357 Prog_363 Prog_369
#> "014" "014" "0212" "012" "0411" "014" "0111" "014" "0411"
#> Prog_375 LT-HSC_105 Prog_339 Prog_346 Prog_352 Prog_358 Prog_364 Prog_370 Prog_376
#> "0111" "0411" "0112" "014" "0111" "031" "0112" "0411" "0112"
#> LT-HSC_106 Prog_340 Prog_347 Prog_353 Prog_359 Prog_365 Prog_371 Prog_377 LT-HSC_107
#> "0412" "014" "0213" "0132" "0112" "0213" "012" "0111" "023"
#> Prog_341 Prog_348 Prog_354 Prog_360 Prog_366 Prog_372 Prog_378 LT-HSC_108 Prog_342
#> "012" "0212" "0412" "0111" "014" "0112" "032" "012" "0111"
#> HSPC_385 HSPC_391 HSPC_397 HSPC_403 HSPC_409 HSPC_415 HSPC_421 HSPC_379 HSPC_386
#> "0211" "031" "0211" "042" "023" "023" "043" "0212" "042"
#> HSPC_392 HSPC_398 HSPC_404 HSPC_410 HSPC_416 HSPC_422 HSPC_380 HSPC_387 HSPC_393
#> "032" "032" "0112" "012" "031" "032" "032" "0412" "0411"
#> HSPC_399 HSPC_405 HSPC_411 HSPC_417 HSPC_423 HSPC_381 HSPC_388 HSPC_394 HSPC_400
#> "031" "032" "012" "012" "012" "0211" "012" "0211" "0412"
#> HSPC_406 HSPC_412 HSPC_418 HSPC_424 HSPC_382 HSPC_389 HSPC_395 HSPC_401 HSPC_407
#> "042" "0131" "031" "0413" "012" "014" "043" "0211" "0131"
#> HSPC_413 HSPC_419 HSPC_425 HSPC_383 HSPC_390 HSPC_396 HSPC_402 HSPC_408 HSPC_414
#> "042" "0131" "0413" "022" "042" "032" "032" "0111" "0211"
#> HSPC_420 HSPC_426 HSPC_384 Prog_385 Prog_391 Prog_397 Prog_403 Prog_409 Prog_415
#> "012" "042" "0211" "0111" "0213" "0111" "0112" "0111" "0111"
#> Prog_421 Prog_379 Prog_386 Prog_392 Prog_398 Prog_404 Prog_410 Prog_416 Prog_422
#> "0111" "0112" "0111" "012" "0111" "0111" "0112" "0112" "0413"
#> Prog_380 Prog_387 Prog_393 Prog_399 Prog_405 Prog_411 Prog_417 Prog_423 Prog_381
#> "0112" "0131" "0112" "012" "012" "042" "0411" "0412" "0112"
#> Prog_388 Prog_394 Prog_400 Prog_406 Prog_412 Prog_418 Prog_424 Prog_382 Prog_389
#> "0111" "033" "0211" "0112" "012" "014" "0112" "031" "0132"
#> Prog_395 Prog_401 Prog_407 Prog_413 Prog_419 Prog_425 Prog_383 Prog_390 Prog_396
#> "0111" "0132" "033" "012" "0111" "014" "0111" "043" "014"
#> Prog_402 Prog_408 Prog_414 Prog_420 Prog_426 Prog_384 HSPC_433 HSPC_439 HSPC_445
#> "0412" "014" "0131" "012" "012" "0411" "0212" "0212" "0212"
#> HSPC_451 HSPC_457 HSPC_463 LT-HSC_109 HSPC_427 HSPC_434 HSPC_440 HSPC_446 HSPC_452
#> "023" "022" "032" "022" "023" "0213" "042" "022" "0211"
#> HSPC_458 HSPC_464 LT-HSC_110 HSPC_428 HSPC_435 HSPC_441 HSPC_447 HSPC_453 HSPC_459
#> "0211" "0211" "031" "0212" "031" "031" "033" "032" "031"
#> HSPC_465 LT-HSC_111 HSPC_429 HSPC_436 HSPC_442 HSPC_448 HSPC_454 HSPC_460 HSPC_466
#> "031" "022" "0211" "0132" "012" "031" "0132" "031" "042"
#> LT-HSC_112 HSPC_430 HSPC_437 HSPC_443 HSPC_449 HSPC_455 HSPC_461 HSPC_467 LT-HSC_113
#> "032" "031" "0211" "031" "031" "022" "042" "031" "032"
#> HSPC_431 HSPC_438 HSPC_444 HSPC_450 HSPC_456 HSPC_462 HSPC_468 LT-HSC_114 HSPC_432
#> "031" "0213" "022" "022" "012" "031" "031" "023" "022"
#> Prog_433 Prog_439 Prog_445 Prog_451 Prog_457 Prog_463 LT-HSC_115 Prog_427 Prog_434
#> "031" "033" "032" "0131" "014" "033" "012" "022" "0111"
#> Prog_440 Prog_446 Prog_452 Prog_458 Prog_464 LT-HSC_116 Prog_428 Prog_435 Prog_441
#> "043" "032" "0212" "043" "032" "031" "012" "0411" "012"
#> Prog_447 Prog_453 Prog_459 Prog_465 LT-HSC_117 Prog_429 Prog_436 Prog_442 Prog_448
#> "012" "014" "033" "043" "031" "0111" "012" "0211" "033"
#> Prog_454 Prog_460 Prog_466 LT-HSC_118 Prog_430 Prog_437 Prog_443 Prog_449 Prog_455
#> "0412" "042" "0411" "0211" "0112" "0132" "0131" "0111" "031"
#> Prog_461 Prog_467 LT-HSC_119 Prog_431 Prog_438 Prog_444 Prog_450 Prog_456 Prog_462
#> "022" "033" "0213" "033" "022" "0111" "012" "012" "042"
#> Prog_468 LT-HSC_120 Prog_432 HSPC_475 HSPC_481 HSPC_487 HSPC_493 HSPC_499 HSPC_505
#> "0411" "0413" "043" "022" "023" "0212" "022" "022" "042"
#> LT-HSC_121 HSPC_469 HSPC_476 HSPC_482 HSPC_488 HSPC_494 HSPC_500 HSPC_506 LT-HSC_122
#> "0213" "023" "0211" "022" "022" "022" "022" "022" "042"
#> HSPC_470 HSPC_477 HSPC_483 HSPC_489 HSPC_495 HSPC_501 HSPC_507 LT-HSC_123 HSPC_471
#> "022" "012" "022" "042" "043" "023" "022" "022" "022"
#> HSPC_478 HSPC_484 HSPC_490 HSPC_496 HSPC_502 HSPC_508 LT-HSC_124 HSPC_472 HSPC_479
#> "022" "0211" "031" "031" "032" "0131" "031" "032" "031"
#> HSPC_485 HSPC_491 HSPC_497 HSPC_503 HSPC_509 LT-HSC_125 HSPC_473 HSPC_480 HSPC_486
#> "012" "0412" "022" "012" "042" "031" "031" "032" "042"
#> HSPC_492 HSPC_498 HSPC_504 HSPC_510 LT-HSC_126 HSPC_474 Prog_475 Prog_481 Prog_487
#> "032" "031" "022" "0412" "032" "032" "0131" "033" "0131"
#> Prog_493 Prog_499 Prog_505 LT-HSC_127 Prog_469 Prog_476 Prog_482 Prog_488 Prog_494
#> "012" "012" "0131" "0212" "042" "012" "012" "0131" "043"
#> Prog_500 Prog_506 LT-HSC_128 Prog_470 Prog_477 Prog_483 Prog_489 Prog_495 Prog_501
#> "0131" "012" "031" "012" "0112" "043" "012" "032" "012"
#> Prog_507 LT-HSC_129 Prog_471 Prog_478 Prog_484 Prog_490 Prog_496 Prog_502 Prog_508
#> "0411" "0211" "012" "0111" "012" "043" "033" "0112" "0111"
#> LT-HSC_130 Prog_472 Prog_479 Prog_485 Prog_491 Prog_497 Prog_503 Prog_509 LT-HSC_131
#> "0132" "043" "012" "0132" "0131" "0411" "043" "031" "031"
#> Prog_473 Prog_480 Prog_486 Prog_492 Prog_498 Prog_504 Prog_510 LT-HSC_132 Prog_474
#> "012" "023" "012" "031" "0213" "012" "042" "014" "032"
#> HSPC_517 HSPC_523 HSPC_529 HSPC_535 HSPC_541 HSPC_547 LT-HSC_133 HSPC_511 HSPC_518
#> "023" "032" "0211" "022" "022" "032" "0212" "023" "022"
#> HSPC_524 HSPC_530 HSPC_536 HSPC_542 HSPC_548 LT-HSC_134 HSPC_512 HSPC_519 HSPC_525
#> "022" "022" "0211" "0211" "022" "023" "032" "0211" "023"
#> HSPC_531 HSPC_537 HSPC_543 HSPC_549 LT-HSC_135 HSPC_513 HSPC_520 HSPC_526 HSPC_532
#> "022" "042" "042" "022" "022" "0212" "042" "031" "042"
#> HSPC_538 HSPC_544 HSPC_550 LT-HSC_136 HSPC_514 HSPC_521 HSPC_527 HSPC_533 HSPC_539
#> "031" "012" "042" "023" "031" "022" "012" "032" "022"
#> HSPC_545 HSPC_551 LT-HSC_137 HSPC_515 HSPC_522 HSPC_528 HSPC_534 HSPC_540 HSPC_546
#> "022" "042" "022" "031" "022" "0413" "031" "032" "022"
#> HSPC_552 LT-HSC_138 HSPC_516 Prog_517 Prog_523 Prog_529 Prog_535 Prog_541 Prog_547
#> "042" "022" "032" "033" "0112" "0131" "0112" "0131" "0132"
#> LT-HSC_139 Prog_511 Prog_518 Prog_524 Prog_530 Prog_536 Prog_542 Prog_548 LT-HSC_140
#> "031" "031" "0413" "042" "012" "0112" "0413" "0112" "022"
#> Prog_512 Prog_519 Prog_525 Prog_531 Prog_537 Prog_543 Prog_549 LT-HSC_141 Prog_513
#> "0411" "042" "043" "0131" "022" "014" "0413" "0211" "033"
#> Prog_520 Prog_526 Prog_532 Prog_538 Prog_544 Prog_550 LT-HSC_142 Prog_514 Prog_521
#> "0131" "023" "022" "0212" "023" "012" "012" "012" "012"
#> Prog_527 Prog_533 Prog_539 Prog_545 Prog_551 LT-HSC_143 Prog_515 Prog_522 Prog_528
#> "012" "022" "0411" "014" "012" "0132" "043" "022" "014"
#> Prog_534 Prog_540 Prog_546 Prog_552 LT-HSC_144 Prog_516 HSPC_559 HSPC_565 HSPC_571
#> "043" "023" "023" "0412" "042" "0111" "022" "023" "031"
#> HSPC_577 HSPC_583 HSPC_589 LT-HSC_145 HSPC_553 HSPC_560 HSPC_566 HSPC_572 HSPC_578
#> "022" "0211" "022" "022" "0131" "022" "022" "023" "022"
#> HSPC_584 HSPC_590 LT-HSC_146 HSPC_554 HSPC_561 HSPC_567 HSPC_573 HSPC_579 HSPC_585
#> "022" "042" "031" "022" "0211" "031" "022" "031" "022"
#> HSPC_591 LT-HSC_147 HSPC_555 HSPC_562 HSPC_568 HSPC_574 HSPC_580 HSPC_586 HSPC_592
#> "023" "022" "022" "023" "022" "012" "032" "032" "031"
#> LT-HSC_148 HSPC_556 HSPC_563 HSPC_569 HSPC_575 HSPC_581 HSPC_587 HSPC_593 LT-HSC_149
#> "042" "032" "031" "0413" "031" "0211" "0211" "022" "022"
#> HSPC_557 HSPC_564 HSPC_570 HSPC_576 HSPC_582 HSPC_588 HSPC_594 LT-HSC_150 HSPC_558
#> "032" "0211" "0211" "022" "022" "0212" "022" "022" "0211"
#> Prog_559 Prog_565 Prog_571 Prog_577 Prog_583 Prog_589 LT-HSC_151 Prog_553 Prog_560
#> "012" "012" "012" "012" "023" "023" "032" "043" "012"
#> Prog_566 Prog_572 Prog_578 Prog_584 Prog_590 LT-HSC_152 Prog_554 Prog_561 Prog_567
#> "014" "032" "0413" "012" "012" "022" "031" "042" "012"
#> Prog_573 Prog_579 Prog_585 Prog_591 LT-HSC_153 Prog_555 Prog_562 Prog_568 Prog_574
#> "023" "012" "033" "023" "022" "031" "0112" "033" "012"
#> Prog_580 Prog_586 Prog_592 LT-HSC_154 Prog_556 Prog_563 Prog_569 Prog_575 Prog_581
#> "031" "043" "0111" "0211" "033" "0213" "0131" "0111" "012"
#> Prog_587 Prog_593 LT-HSC_155 Prog_557 Prog_564 Prog_570 Prog_576 Prog_582 Prog_588
#> "0132" "012" "0211" "012" "031" "0411" "014" "012" "031"
#> Prog_594 LT-HSC_156 Prog_558 HSPC_601 HSPC_607 HSPC_613 HSPC_619 HSPC_625 HSPC_631
#> "033" "012" "031" "042" "023" "042" "0211" "022" "0412"
#> LT-HSC_157 HSPC_595 HSPC_602 HSPC_608 HSPC_614 HSPC_620 HSPC_626 HSPC_632 LT-HSC_158
#> "023" "031" "022" "022" "042" "022" "023" "0211" "022"
#> HSPC_596 HSPC_603 HSPC_609 HSPC_615 HSPC_621 HSPC_627 HSPC_633 LT-HSC_159 HSPC_597
#> "042" "032" "023" "023" "0211" "042" "023" "0411" "042"
#> HSPC_604 HSPC_610 HSPC_616 HSPC_622 HSPC_628 HSPC_634 LT-HSC_160 HSPC_598 HSPC_605
#> "022" "022" "0211" "0211" "042" "042" "023" "042" "0213"
#> HSPC_611 HSPC_617 HSPC_623 HSPC_629 HSPC_635 LT-HSC_161 HSPC_599 HSPC_606 HSPC_612
#> "0211" "032" "042" "042" "042" "023" "022" "031" "031"
#> HSPC_618 HSPC_624 HSPC_630 HSPC_636 LT-HSC_162 HSPC_600 Prog_601 Prog_607 Prog_613
#> "022" "032" "022" "031" "023" "023" "0211" "012" "033"
#> Prog_619 Prog_625 Prog_631 LT-HSC_163 Prog_595 Prog_602 Prog_608 Prog_614 Prog_620
#> "022" "0413" "032" "022" "022" "0132" "0112" "0132" "042"
#> Prog_626 Prog_632 LT-HSC_164 Prog_596 Prog_603 Prog_609 Prog_615 Prog_621 Prog_627
#> "012" "012" "031" "033" "0112" "012" "0411" "012" "031"
#> Prog_633 LT-HSC_165 Prog_597 Prog_604 Prog_610 Prog_616 Prog_622 Prog_628 Prog_634
#> "043" "022" "033" "033" "033" "0111" "012" "012" "043"
#> LT-HSC_166 Prog_598 Prog_605 Prog_611 Prog_617 Prog_623 Prog_629 Prog_635 LT-HSC_167
#> "042" "012" "014" "033" "031" "0132" "012" "033" "022"
#> Prog_599 Prog_606 Prog_612 Prog_618 Prog_624 Prog_630 Prog_636 LT-HSC_168 Prog_600
#> "012" "031" "0131" "012" "012" "0131" "0213" "0131" "012"
#> HSPC_643 HSPC_649 HSPC_655 HSPC_661 HSPC_667 HSPC_673 LT-HSC_169 HSPC_637 HSPC_644
#> "042" "032" "0212" "042" "022" "022" "023" "031" "0132"
#> HSPC_650 HSPC_656 HSPC_662 HSPC_668 HSPC_674 LT-HSC_170 HSPC_638 HSPC_645 HSPC_651
#> "0211" "022" "022" "032" "031" "042" "0132" "032" "0411"
#> HSPC_657 HSPC_663 HSPC_669 HSPC_675 LT-HSC_171 HSPC_639 HSPC_646 HSPC_652 HSPC_658
#> "023" "0412" "022" "0212" "042" "031" "031" "042" "0412"
#> HSPC_664 HSPC_670 HSPC_676 LT-HSC_172 HSPC_640 HSPC_647 HSPC_653 HSPC_659 HSPC_665
#> "032" "023" "022" "022" "031" "022" "0211" "0211" "042"
#> HSPC_671 HSPC_677 LT-HSC_173 HSPC_641 HSPC_648 HSPC_654 HSPC_660 HSPC_666 HSPC_672
#> "032" "023" "022" "031" "022" "042" "043" "0413" "032"
#> HSPC_678 LT-HSC_174 HSPC_642 Prog_643 Prog_649 Prog_655 Prog_661 Prog_667 Prog_673
#> "022" "031" "0211" "0412" "0112" "0112" "0131" "043" "042"
#> LT-HSC_175 Prog_637 Prog_644 Prog_650 Prog_656 Prog_662 Prog_668 Prog_674 LT-HSC_176
#> "0211" "014" "033" "012" "033" "033" "023" "033" "022"
#> Prog_638 Prog_645 Prog_651 Prog_657 Prog_663 Prog_669 Prog_675 LT-HSC_177 Prog_639
#> "0112" "043" "031" "0111" "0112" "023" "012" "022" "014"
#> Prog_646 Prog_652 Prog_658 Prog_664 Prog_670 Prog_676 LT-HSC_178 Prog_640 Prog_647
#> "012" "012" "012" "023" "012" "033" "0211" "0111" "043"
#> Prog_653 Prog_659 Prog_665 Prog_671 Prog_677 LT-HSC_179 Prog_641 Prog_648 Prog_654
#> "043" "033" "031" "031" "0112" "031" "023" "042" "0132"
#> Prog_660 Prog_666 Prog_672 Prog_678 LT-HSC_180 Prog_642 HSPC_685 HSPC_691 HSPC_697
#> "031" "033" "031" "0411" "043" "032" "0213" "0212" "0413"
#> HSPC_703 HSPC_709 HSPC_715 LT-HSC_181 HSPC_679 HSPC_686 HSPC_692 HSPC_698 HSPC_704
#> "022" "023" "0212" "0212" "031" "0211" "023" "022" "022"
#> HSPC_710 HSPC_716 LT-HSC_182 HSPC_680 HSPC_687 HSPC_693 HSPC_699 HSPC_705 HSPC_711
#> "0211" "022" "0213" "022" "023" "023" "022" "012" "0211"
#> HSPC_717 LT-HSC_183 HSPC_681 HSPC_688 HSPC_694 HSPC_700 HSPC_706 HSPC_712 HSPC_718
#> "0412" "031" "042" "0211" "0211" "0413" "033" "0211" "0211"
#> LT-HSC_184 HSPC_682 HSPC_689 HSPC_695 HSPC_701 HSPC_707 HSPC_713 HSPC_719 LT-HSC_185
#> "031" "012" "022" "0132" "042" "042" "0212" "022" "023"
#> HSPC_683 HSPC_690 HSPC_696 HSPC_702 HSPC_708 HSPC_714 HSPC_720 LT-HSC_186 HSPC_684
#> "0412" "022" "043" "022" "031" "022" "012" "0211" "023"
#> Prog_685 Prog_691 Prog_697 Prog_703 Prog_709 Prog_715 LT-HSC_187 Prog_679 Prog_686
#> "012" "0213" "0112" "043" "014" "012" "031" "012" "0413"
#> Prog_692 Prog_698 Prog_704 Prog_710 Prog_716 LT-HSC_188 Prog_680 Prog_687 Prog_693
#> "032" "0131" "031" "031" "033" "031" "012" "012" "012"
#> Prog_699 Prog_705 Prog_711 Prog_717 LT-HSC_189 Prog_681 Prog_688 Prog_694 Prog_700
#> "012" "012" "033" "012" "0211" "0131" "0112" "033" "0111"
#> Prog_706 Prog_712 Prog_718 LT-HSC_190 Prog_682 Prog_689 Prog_695 Prog_701 Prog_707
#> "0131" "0132" "012" "023" "0132" "033" "0111" "0111" "033"
#> Prog_713 Prog_719 LT-HSC_191 Prog_683 Prog_690 Prog_696 Prog_702 Prog_708 Prog_714
#> "0131" "0112" "031" "023" "033" "0411" "014" "014" "014"
#> Prog_720 LT-HSC_192 Prog_684 HSPC_727 HSPC_733 HSPC_739 HSPC_745 HSPC_751 HSPC_757
#> "014" "012" "032" "022" "022" "023" "023" "022" "022"
#> LT-HSC_193 HSPC_721 HSPC_728 HSPC_734 HSPC_740 HSPC_746 HSPC_752 HSPC_758 LT-HSC_194
#> "022" "023" "0213" "012" "022" "023" "023" "032" "022"
#> HSPC_722 HSPC_729 HSPC_735 HSPC_741 HSPC_747 HSPC_753 HSPC_759 LT-HSC_195 HSPC_723
#> "031" "031" "042" "0211" "022" "031" "032" "032" "032"
#> HSPC_730 HSPC_736 HSPC_742 HSPC_748 HSPC_754 HSPC_760 LT-HSC_196 HSPC_724 HSPC_731
#> "031" "032" "032" "022" "0213" "042" "0211" "032" "0412"
#> HSPC_737 HSPC_743 HSPC_749 HSPC_755 HSPC_761 LT-HSC_197 HSPC_725 HSPC_732 HSPC_738
#> "012" "031" "022" "031" "032" "022" "023" "032" "022"
#> HSPC_744 HSPC_750 HSPC_756 HSPC_762 LT-HSC_198 HSPC_726 Prog_727 Prog_733 Prog_739
#> "042" "031" "022" "042" "022" "0213" "012" "033" "0412"
#> Prog_745 Prog_751 Prog_757 LT-HSC_199 Prog_721 Prog_728 Prog_734 Prog_740 Prog_746
#> "033" "033" "0412" "0211" "014" "032" "014" "033" "0411"
#> Prog_752 Prog_758 LT-HSC_200 Prog_722 Prog_729 Prog_735 Prog_741 Prog_747 Prog_753
#> "033" "033" "022" "014" "023" "012" "0213" "033" "0131"
#> Prog_759 LT-HSC_201 Prog_723 Prog_730 Prog_736 Prog_742 Prog_748 Prog_754 Prog_760
#> "012" "022" "0112" "0112" "0131" "0213" "0413" "0131" "012"
#> LT-HSC_202 Prog_724 Prog_731 Prog_737 Prog_743 Prog_749 Prog_755 Prog_761 LT-HSC_203
#> "031" "033" "0112" "031" "012" "043" "0213" "0412" "0213"
#> Prog_725 Prog_732 Prog_738 Prog_744 Prog_750 Prog_756 Prog_762 LT-HSC_204 Prog_726
#> "031" "043" "033" "033" "0413" "043" "031" "032" "031"
#> HSPC_769 HSPC_775 HSPC_781 HSPC_787 HSPC_793 HSPC_799 LT-HSC_205 HSPC_763 HSPC_770
#> "023" "023" "022" "023" "0212" "023" "023" "0212" "042"
#> HSPC_776 HSPC_782 HSPC_788 HSPC_794 HSPC_800 LT-HSC_206 HSPC_764 HSPC_771 HSPC_777
#> "023" "022" "023" "032" "0413" "022" "022" "032" "032"
#> HSPC_783 HSPC_789 HSPC_795 HSPC_801 LT-HSC_207 HSPC_765 HSPC_772 HSPC_778 HSPC_784
#> "022" "042" "032" "031" "042" "023" "042" "031" "031"
#> HSPC_790 HSPC_796 HSPC_802 LT-HSC_208 HSPC_766 HSPC_773 HSPC_779 HSPC_785 HSPC_791
#> "042" "012" "022" "022" "012" "032" "042" "031" "043"
#> HSPC_797 HSPC_803 LT-HSC_209 HSPC_767 HSPC_774 HSPC_780 HSPC_786 HSPC_792 HSPC_798
#> "032" "022" "0211" "012" "032" "031" "031" "0213" "022"
#> HSPC_804 LT-HSC_210 HSPC_768 Prog_769 Prog_775 Prog_781 Prog_787 Prog_793 Prog_799
#> "022" "022" "023" "012" "033" "012" "043" "0132" "033"
#> LT-HSC_211 Prog_763 Prog_770 Prog_776 Prog_782 Prog_788 Prog_794 Prog_800 LT-HSC_212
#> "042" "012" "014" "0112" "012" "0112" "012" "012" "031"
#> Prog_764 Prog_771 Prog_777 Prog_783 Prog_789 Prog_795 Prog_801 LT-HSC_213 Prog_765
#> "012" "014" "012" "014" "012" "012" "0132" "022" "0131"
#> Prog_772 Prog_778 Prog_784 Prog_790 Prog_796 Prog_802 LT-HSC_214 Prog_766 Prog_773
#> "012" "023" "032" "0112" "0412" "014" "031" "0212" "0212"
#> Prog_779 Prog_785 Prog_791 Prog_797 Prog_803 LT-HSC_215 Prog_767 Prog_774 Prog_780
#> "0131" "033" "012" "031" "043" "032" "0111" "012" "0111"
#> Prog_786 Prog_792 Prog_798 Prog_804 LT-HSC_216 Prog_768 HSPC_811 HSPC_817 HSPC_823
#> "0111" "0131" "0131" "012" "0411" "012" "0212" "0212" "0212"
#> HSPC_829 HSPC_835 HSPC_841 HSPC_847 HSPC_805 HSPC_812 HSPC_818 HSPC_824 HSPC_830
#> "0213" "032" "043" "023" "0212" "012" "031" "031" "0212"
#> HSPC_836 HSPC_842 HSPC_848 HSPC_806 HSPC_813 HSPC_819 HSPC_825 HSPC_831 HSPC_837
#> "023" "023" "022" "023" "012" "042" "031" "031" "0412"
#> HSPC_843 HSPC_849 HSPC_807 HSPC_814 HSPC_820 HSPC_826 HSPC_832 HSPC_838 HSPC_844
#> "031" "022" "012" "0413" "012" "031" "032" "032" "022"
#> HSPC_850 HSPC_808 HSPC_815 HSPC_821 HSPC_827 HSPC_833 HSPC_839 HSPC_845 HSPC_851
#> "0211" "012" "032" "042" "022" "012" "0413" "031" "023"
#> HSPC_809 HSPC_816 HSPC_822 HSPC_828 HSPC_834 HSPC_840 HSPC_846 HSPC_852 HSPC_810
#> "022" "042" "031" "032" "032" "022" "042" "022" "022"
#> Prog_811 Prog_817 Prog_823 Prog_829 Prog_835 Prog_841 Prog_847 Prog_805 Prog_812
#> "014" "0132" "031" "012" "014" "0411" "012" "042" "023"
#> Prog_818 Prog_824 Prog_830 Prog_836 Prog_842 Prog_848 Prog_806 Prog_813 Prog_819
#> "014" "012" "0112" "0131" "014" "022" "033" "0112" "0112"
#> Prog_825 Prog_831 Prog_837 Prog_843 Prog_849 Prog_807 Prog_814 Prog_820 Prog_826
#> "0111" "014" "014" "0131" "042" "014" "0112" "0132" "0112"
#> Prog_832 Prog_838 Prog_844 Prog_850 Prog_808 Prog_815 Prog_821 Prog_827 Prog_833
#> "012" "0112" "014" "014" "012" "014" "0111" "033" "012"
#> Prog_839 Prog_845 Prog_851 Prog_809 Prog_816 Prog_822 Prog_828 Prog_834 Prog_840
#> "0131" "0131" "033" "0132" "012" "0111" "0111" "012" "012"
#> Prog_846 Prog_852 Prog_810
#> "012" "0411" "0131"
get_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 2046))
#> HSPC_007 HSPC_013 HSPC_019 HSPC_025 HSPC_031 HSPC_037 LT-HSC_001 HSPC_001 HSPC_008
#> "0213" "023" "0211" "042" "032" "042" "023" "012" "042"
#> HSPC_014 HSPC_020 HSPC_026 HSPC_032 HSPC_038 LT-HSC_002 HSPC_002 HSPC_009 HSPC_015
#> "022" "042" "0412" "0211" "022" "042" "022" "022" "023"
#> HSPC_021 HSPC_027 HSPC_033 HSPC_039 LT-HSC_003 HSPC_003 HSPC_010 HSPC_016 HSPC_022
#> "022" "033" "031" "0211" "023" "012" "0213" "012" "0412"
#> HSPC_028 HSPC_034 HSPC_040 LT-HSC_004 HSPC_004 HSPC_011 HSPC_017 HSPC_023 HSPC_029
#> "031" "012" "032" "022" "031" "042" "022" "042" "0211"
#> HSPC_035 HSPC_041 LT-HSC_005 HSPC_005 HSPC_012 HSPC_018 HSPC_024 HSPC_030 HSPC_036
#> "022" "042" "0211" "0211" "042" "042" "022" "031" "012"
#> HSPC_042 LT-HSC_006 HSPC_006 Prog_007 Prog_013 Prog_019 Prog_025 Prog_031 Prog_037
#> "032" "022" "0412" "012" "012" "0131" "0411" "033" "033"
#> LT-HSC_007 Prog_001 Prog_008 Prog_014 Prog_020 Prog_026 Prog_032 Prog_038 LT-HSC_008
#> "042" "043" "011" "011" "014" "033" "014" "014" "031"
#> Prog_002 Prog_009 Prog_015 Prog_021 Prog_027 Prog_033 Prog_039 LT-HSC_009 Prog_003
#> "012" "011" "012" "014" "012" "011" "011" "022" "012"
#> Prog_010 Prog_016 Prog_022 Prog_028 Prog_034 Prog_040 LT-HSC_010 Prog_004 Prog_011
#> "0412" "0411" "0411" "011" "0211" "042" "0412" "033" "014"
#> Prog_017 Prog_023 Prog_029 Prog_035 Prog_041 LT-HSC_011 Prog_005 Prog_012 Prog_018
#> "012" "012" "014" "011" "0213" "0213" "0213" "022" "022"
#> Prog_024 Prog_030 Prog_036 Prog_042 LT-HSC_012 Prog_006 HSPC_049 HSPC_055 HSPC_061
#> "014" "0411" "0412" "0411" "0411" "011" "031" "042" "042"
#> HSPC_067 HSPC_073 HSPC_079 LT-HSC_013 HSPC_043 HSPC_050 HSPC_056 HSPC_062 HSPC_068
#> "042" "022" "0412" "022" "042" "043" "022" "0413" "022"
#> HSPC_074 HSPC_080 LT-HSC_014 HSPC_044 HSPC_051 HSPC_057 HSPC_063 HSPC_069 HSPC_075
#> "022" "032" "022" "043" "032" "022" "0412" "032" "022"
#> HSPC_081 LT-HSC_015 HSPC_045 HSPC_052 HSPC_058 HSPC_064 HSPC_070 HSPC_076 HSPC_082
#> "032" "022" "042" "043" "031" "0413" "033" "032" "042"
#> LT-HSC_016 HSPC_046 HSPC_053 HSPC_059 HSPC_065 HSPC_071 HSPC_077 HSPC_083 LT-HSC_017
#> "022" "032" "012" "0211" "032" "0413" "012" "022" "022"
#> HSPC_047 HSPC_054 HSPC_060 HSPC_066 HSPC_072 HSPC_078 HSPC_084 LT-HSC_018 HSPC_048
#> "023" "031" "031" "031" "0413" "043" "042" "022" "032"
#> Prog_049 Prog_055 Prog_061 Prog_067 Prog_073 Prog_079 LT-HSC_019 Prog_043 Prog_050
#> "011" "012" "011" "014" "032" "011" "0211" "0132" "012"
#> Prog_056 Prog_062 Prog_068 Prog_074 Prog_080 LT-HSC_020 Prog_044 Prog_051 Prog_057
#> "012" "042" "032" "0411" "043" "031" "032" "014" "0131"
#> Prog_063 Prog_069 Prog_075 Prog_081 LT-HSC_021 Prog_045 Prog_052 Prog_058 Prog_064
#> "043" "012" "012" "011" "0413" "0132" "043" "014" "014"
#> Prog_070 Prog_076 Prog_082 LT-HSC_022 Prog_046 Prog_053 Prog_059 Prog_065 Prog_071
#> "0412" "014" "011" "022" "011" "011" "012" "0131" "012"
#> Prog_077 Prog_083 LT-HSC_023 Prog_047 Prog_054 Prog_060 Prog_066 Prog_072 Prog_078
#> "012" "012" "022" "012" "0411" "0213" "014" "033" "014"
#> Prog_084 LT-HSC_024 Prog_048 HSPC_091 HSPC_097 HSPC_103 HSPC_109 HSPC_115 HSPC_121
#> "011" "033" "032" "0212" "023" "022" "043" "022" "023"
#> LT-HSC_025 HSPC_085 HSPC_092 HSPC_098 HSPC_104 HSPC_110 HSPC_116 HSPC_122 LT-HSC_026
#> "0212" "042" "0212" "043" "023" "043" "0211" "031" "022"
#> HSPC_086 HSPC_093 HSPC_099 HSPC_105 HSPC_111 HSPC_117 HSPC_123 LT-HSC_027 HSPC_087
#> "0211" "0211" "042" "022" "022" "042" "022" "023" "022"
#> HSPC_094 HSPC_100 HSPC_106 HSPC_112 HSPC_118 HSPC_124 LT-HSC_028 HSPC_088 HSPC_095
#> "012" "032" "022" "0211" "031" "0211" "032" "032" "022"
#> HSPC_101 HSPC_107 HSPC_113 HSPC_119 HSPC_125 LT-HSC_029 HSPC_089 HSPC_096 HSPC_102
#> "012" "042" "023" "023" "031" "0212" "032" "043" "012"
#> HSPC_108 HSPC_114 HSPC_120 HSPC_126 LT-HSC_030 HSPC_090 Prog_091 Prog_097 Prog_103
#> "031" "032" "031" "032" "0212" "012" "011" "012" "012"
#> Prog_109 Prog_115 Prog_121 LT-HSC_031 Prog_085 Prog_092 Prog_098 Prog_104 Prog_110
#> "0412" "014" "0213" "032" "012" "033" "011" "0211" "011"
#> Prog_116 Prog_122 LT-HSC_032 Prog_086 Prog_093 Prog_099 Prog_105 Prog_111 Prog_117
#> "012" "033" "011" "0212" "012" "012" "012" "014" "0132"
#> Prog_123 LT-HSC_033 Prog_087 Prog_094 Prog_100 Prog_106 Prog_112 Prog_118 Prog_124
#> "012" "031" "012" "014" "011" "031" "011" "0412" "033"
#> LT-HSC_034 Prog_088 Prog_095 Prog_101 Prog_107 Prog_113 Prog_119 Prog_125 LT-HSC_035
#> "031" "043" "011" "0131" "011" "012" "011" "031" "0212"
#> Prog_089 Prog_096 Prog_102 Prog_108 Prog_114 Prog_120 Prog_126 LT-HSC_036 Prog_090
#> "014" "032" "031" "0411" "0413" "023" "014" "033" "011"
#> HSPC_133 HSPC_139 HSPC_145 HSPC_151 HSPC_157 HSPC_163 LT-HSC_037 HSPC_127 HSPC_134
#> "022" "022" "023" "042" "043" "023" "023" "0412" "023"
#> HSPC_140 HSPC_146 HSPC_152 HSPC_158 HSPC_164 LT-HSC_038 HSPC_128 HSPC_135 HSPC_141
#> "023" "0412" "022" "042" "022" "023" "023" "031" "022"
#> HSPC_147 HSPC_153 HSPC_159 HSPC_165 LT-HSC_039 HSPC_129 HSPC_136 HSPC_142 HSPC_148
#> "023" "022" "042" "043" "022" "0211" "042" "042" "043"
#> HSPC_154 HSPC_160 HSPC_166 LT-HSC_040 HSPC_130 HSPC_137 HSPC_143 HSPC_149 HSPC_155
#> "043" "0211" "042" "022" "042" "0211" "022" "022" "023"
#> HSPC_161 HSPC_167 LT-HSC_041 HSPC_131 HSPC_138 HSPC_144 HSPC_150 HSPC_156 HSPC_162
#> "042" "023" "022" "022" "012" "031" "0211" "012" "032"
#> HSPC_168 LT-HSC_042 HSPC_132 Prog_133 Prog_139 Prog_145 Prog_151 Prog_157 Prog_163
#> "0413" "022" "0132" "012" "011" "012" "032" "012" "011"
#> LT-HSC_043 Prog_127 Prog_134 Prog_140 Prog_146 Prog_152 Prog_158 Prog_164 LT-HSC_044
#> "0132" "032" "043" "011" "011" "043" "011" "0213" "043"
#> Prog_128 Prog_135 Prog_141 Prog_147 Prog_153 Prog_159 Prog_165 LT-HSC_045 Prog_129
#> "012" "032" "0132" "0211" "012" "0412" "043" "0412" "0131"
#> Prog_136 Prog_142 Prog_148 Prog_154 Prog_160 Prog_166 LT-HSC_046 Prog_130 Prog_137
#> "0132" "033" "023" "033" "022" "014" "031" "0131" "012"
#> Prog_143 Prog_149 Prog_155 Prog_161 Prog_167 LT-HSC_047 Prog_131 Prog_138 Prog_144
#> "0131" "0413" "012" "033" "012" "0213" "033" "0211" "043"
#> Prog_150 Prog_156 Prog_162 Prog_168 LT-HSC_048 Prog_132 HSPC_175 HSPC_181 HSPC_187
#> "0131" "0212" "0412" "0131" "023" "0131" "042" "022" "022"
#> HSPC_193 HSPC_199 HSPC_205 LT-HSC_049 HSPC_169 HSPC_176 HSPC_182 HSPC_188 HSPC_194
#> "033" "031" "022" "022" "042" "022" "023" "0211" "0211"
#> HSPC_200 HSPC_206 LT-HSC_050 HSPC_170 HSPC_177 HSPC_183 HSPC_189 HSPC_195 HSPC_201
#> "022" "012" "022" "023" "022" "033" "031" "012" "0211"
#> HSPC_207 LT-HSC_051 HSPC_171 HSPC_178 HSPC_184 HSPC_190 HSPC_196 HSPC_202 HSPC_208
#> "032" "022" "022" "031" "0212" "0413" "042" "032" "022"
#> LT-HSC_052 HSPC_172 HSPC_179 HSPC_185 HSPC_191 HSPC_197 HSPC_203 HSPC_209 LT-HSC_053
#> "012" "012" "012" "023" "022" "0211" "042" "0211" "0211"
#> HSPC_173 HSPC_180 HSPC_186 HSPC_192 HSPC_198 HSPC_204 HSPC_210 LT-HSC_054 HSPC_174
#> "023" "043" "033" "022" "031" "0412" "043" "022" "031"
#> Prog_175 Prog_181 Prog_187 Prog_193 Prog_199 Prog_205 LT-HSC_055 Prog_169 Prog_176
#> "0411" "0211" "033" "042" "032" "0413" "0132" "0211" "012"
#> Prog_182 Prog_188 Prog_194 Prog_200 Prog_206 LT-HSC_056 Prog_170 Prog_177 Prog_183
#> "043" "014" "023" "043" "012" "0131" "011" "042" "0132"
#> Prog_189 Prog_195 Prog_201 Prog_207 LT-HSC_057 Prog_171 Prog_178 Prog_184 Prog_190
#> "012" "042" "0412" "014" "031" "042" "011" "0131" "012"
#> Prog_196 Prog_202 Prog_208 LT-HSC_058 Prog_172 Prog_179 Prog_185 Prog_191 Prog_197
#> "011" "0213" "033" "032" "014" "0131" "011" "033" "0131"
#> Prog_203 Prog_209 LT-HSC_059 Prog_173 Prog_180 Prog_186 Prog_192 Prog_198 Prog_204
#> "0132" "0131" "0212" "043" "032" "012" "012" "0211" "023"
#> Prog_210 LT-HSC_060 Prog_174 HSPC_217 HSPC_223 HSPC_229 HSPC_235 HSPC_241 HSPC_247
#> "032" "0131" "0213" "0212" "022" "023" "022" "0211" "023"
#> LT-HSC_061 HSPC_211 HSPC_218 HSPC_224 HSPC_230 HSPC_236 HSPC_242 HSPC_248 LT-HSC_062
#> "0212" "042" "022" "022" "042" "043" "023" "022" "023"
#> HSPC_212 HSPC_219 HSPC_225 HSPC_231 HSPC_237 HSPC_243 HSPC_249 LT-HSC_063 HSPC_213
#> "023" "042" "022" "023" "022" "0412" "022" "033" "0413"
#> HSPC_220 HSPC_226 HSPC_232 HSPC_238 HSPC_244 HSPC_250 LT-HSC_064 HSPC_214 HSPC_221
#> "022" "0211" "023" "0212" "032" "0413" "011" "012" "031"
#> HSPC_227 HSPC_233 HSPC_239 HSPC_245 HSPC_251 LT-HSC_065 HSPC_215 HSPC_222 HSPC_228
#> "022" "042" "022" "022" "0413" "031" "0412" "042" "023"
#> HSPC_234 HSPC_240 HSPC_246 HSPC_252 LT-HSC_066 HSPC_216 Prog_217 Prog_223 Prog_229
#> "0211" "031" "022" "0213" "031" "012" "011" "042" "011"
#> Prog_235 Prog_241 Prog_247 LT-HSC_067 Prog_211 Prog_218 Prog_224 Prog_230 Prog_236
#> "023" "022" "033" "0213" "011" "012" "0132" "0413" "012"
#> Prog_242 Prog_248 LT-HSC_068 Prog_212 Prog_219 Prog_225 Prog_231 Prog_237 Prog_243
#> "014" "043" "012" "014" "0213" "033" "0132" "042" "0131"
#> Prog_249 LT-HSC_069 Prog_213 Prog_220 Prog_226 Prog_232 Prog_238 Prog_244 Prog_250
#> "011" "032" "043" "0213" "031" "033" "012" "032" "014"
#> LT-HSC_070 Prog_214 Prog_221 Prog_227 Prog_233 Prog_239 Prog_245 Prog_251 LT-HSC_071
#> "043" "0413" "011" "0132" "012" "011" "012" "0212" "032"
#> Prog_215 Prog_222 Prog_228 Prog_234 Prog_240 Prog_246 Prog_252 LT-HSC_072 Prog_216
#> "011" "032" "0131" "012" "012" "033" "032" "012" "011"
#> HSPC_259 HSPC_265 HSPC_271 HSPC_277 HSPC_283 HSPC_289 LT-HSC_073 HSPC_253 HSPC_260
#> "023" "022" "0412" "023" "022" "022" "023" "0413" "0211"
#> HSPC_266 HSPC_272 HSPC_278 HSPC_284 HSPC_290 LT-HSC_074 HSPC_254 HSPC_261 HSPC_267
#> "022" "0211" "042" "0211" "0413" "022" "022" "0132" "031"
#> HSPC_273 HSPC_279 HSPC_285 HSPC_291 LT-HSC_075 HSPC_255 HSPC_262 HSPC_268 HSPC_274
#> "0211" "043" "012" "033" "031" "032" "0212" "012" "022"
#> HSPC_280 HSPC_286 HSPC_292 LT-HSC_076 HSPC_256 HSPC_263 HSPC_269 HSPC_275 HSPC_281
#> "0412" "042" "0412" "042" "011" "0412" "0132" "0131" "023"
#> HSPC_287 HSPC_293 LT-HSC_077 HSPC_257 HSPC_264 HSPC_270 HSPC_276 HSPC_282 HSPC_288
#> "0413" "0412" "023" "0413" "022" "032" "032" "012" "012"
#> HSPC_294 LT-HSC_078 HSPC_258 Prog_259 Prog_265 Prog_271 Prog_277 Prog_283 Prog_289
#> "0413" "022" "012" "031" "011" "033" "031" "042" "0412"
#> LT-HSC_079 Prog_253 Prog_260 Prog_266 Prog_272 Prog_278 Prog_284 Prog_290 LT-HSC_080
#> "0211" "014" "012" "012" "012" "011" "014" "011" "032"
#> Prog_254 Prog_261 Prog_267 Prog_273 Prog_279 Prog_285 Prog_291 LT-HSC_081 Prog_255
#> "011" "014" "0131" "0131" "011" "014" "0411" "012" "012"
#> Prog_262 Prog_268 Prog_274 Prog_280 Prog_286 Prog_292 LT-HSC_082 Prog_256 Prog_263
#> "012" "012" "014" "033" "011" "012" "032" "042" "0131"
#> Prog_269 Prog_275 Prog_281 Prog_287 Prog_293 LT-HSC_083 Prog_257 Prog_264 Prog_270
#> "011" "012" "014" "0131" "033" "0212" "0213" "023" "0131"
#> Prog_276 Prog_282 Prog_288 Prog_294 LT-HSC_084 Prog_258 HSPC_301 HSPC_307 HSPC_313
#> "012" "011" "011" "012" "033" "0132" "023" "022" "042"
#> HSPC_319 HSPC_325 HSPC_331 LT-HSC_085 HSPC_295 HSPC_302 HSPC_308 HSPC_314 HSPC_320
#> "0212" "022" "022" "022" "0413" "023" "043" "042" "043"
#> HSPC_326 HSPC_332 LT-HSC_086 HSPC_296 HSPC_303 HSPC_309 HSPC_315 HSPC_321 HSPC_327
#> "022" "012" "042" "022" "012" "022" "022" "042" "012"
#> HSPC_333 LT-HSC_087 HSPC_297 HSPC_304 HSPC_310 HSPC_316 HSPC_322 HSPC_328 HSPC_334
#> "012" "0212" "022" "032" "022" "023" "031" "042" "022"
#> LT-HSC_088 HSPC_298 HSPC_305 HSPC_311 HSPC_317 HSPC_323 HSPC_329 HSPC_335 LT-HSC_089
#> "043" "032" "0412" "0212" "023" "031" "042" "022" "022"
#> HSPC_299 HSPC_306 HSPC_312 HSPC_318 HSPC_324 HSPC_330 HSPC_336 LT-HSC_090 HSPC_300
#> "033" "033" "0413" "022" "031" "031" "022" "032" "012"
#> Prog_301 Prog_307 Prog_313 Prog_319 Prog_325 Prog_331 LT-HSC_091 Prog_295 Prog_302
#> "0411" "0412" "0413" "0132" "012" "012" "011" "0412" "0212"
#> Prog_308 Prog_314 Prog_320 Prog_326 Prog_332 LT-HSC_092 Prog_296 Prog_303 Prog_309
#> "012" "033" "012" "011" "012" "0212" "012" "022" "022"
#> Prog_315 Prog_321 Prog_327 Prog_333 LT-HSC_093 Prog_297 Prog_304 Prog_310 Prog_316
#> "0411" "0411" "012" "043" "042" "043" "012" "0412" "0411"
#> Prog_322 Prog_328 Prog_334 LT-HSC_094 Prog_298 Prog_305 Prog_311 Prog_317 Prog_323
#> "043" "0411" "014" "042" "014" "0413" "043" "0212" "0411"
#> Prog_329 Prog_335 LT-HSC_095 Prog_299 Prog_306 Prog_312 Prog_318 Prog_324 Prog_330
#> "0411" "0413" "011" "011" "022" "011" "011" "011" "0132"
#> Prog_336 LT-HSC_096 Prog_300 HSPC_343 HSPC_349 HSPC_355 HSPC_361 HSPC_367 HSPC_373
#> "0132" "012" "0131" "0132" "031" "0213" "023" "022" "023"
#> LT-HSC_097 HSPC_337 HSPC_344 HSPC_350 HSPC_356 HSPC_362 HSPC_368 HSPC_374 LT-HSC_098
#> "0212" "022" "0412" "022" "043" "0411" "042" "032" "011"
#> HSPC_338 HSPC_345 HSPC_351 HSPC_357 HSPC_363 HSPC_369 HSPC_375 LT-HSC_099 HSPC_339
#> "011" "043" "043" "0211" "022" "0211" "0211" "023" "032"
#> HSPC_346 HSPC_352 HSPC_358 HSPC_364 HSPC_370 HSPC_376 LT-HSC_100 HSPC_340 HSPC_347
#> "012" "0412" "042" "042" "0131" "042" "011" "0213" "0211"
#> HSPC_353 HSPC_359 HSPC_365 HSPC_371 HSPC_377 LT-HSC_101 HSPC_341 HSPC_348 HSPC_354
#> "012" "032" "023" "012" "0413" "0411" "012" "033" "022"
#> HSPC_360 HSPC_366 HSPC_372 HSPC_378 LT-HSC_102 HSPC_342 Prog_343 Prog_349 Prog_355
#> "042" "0213" "042" "0212" "011" "0131" "0132" "0411" "0413"
#> Prog_361 Prog_367 Prog_373 LT-HSC_103 Prog_337 Prog_344 Prog_350 Prog_356 Prog_362
#> "014" "0131" "011" "0132" "011" "0211" "014" "011" "0412"
#> Prog_368 Prog_374 LT-HSC_104 Prog_338 Prog_345 Prog_351 Prog_357 Prog_363 Prog_369
#> "014" "014" "0212" "012" "0411" "014" "011" "014" "0411"
#> Prog_375 LT-HSC_105 Prog_339 Prog_346 Prog_352 Prog_358 Prog_364 Prog_370 Prog_376
#> "011" "0411" "011" "014" "011" "031" "011" "0411" "011"
#> LT-HSC_106 Prog_340 Prog_347 Prog_353 Prog_359 Prog_365 Prog_371 Prog_377 LT-HSC_107
#> "0412" "014" "0213" "0132" "011" "0213" "012" "011" "023"
#> Prog_341 Prog_348 Prog_354 Prog_360 Prog_366 Prog_372 Prog_378 LT-HSC_108 Prog_342
#> "012" "0212" "0412" "011" "014" "011" "032" "012" "011"
#> HSPC_385 HSPC_391 HSPC_397 HSPC_403 HSPC_409 HSPC_415 HSPC_421 HSPC_379 HSPC_386
#> "0211" "031" "0211" "042" "023" "023" "043" "0212" "042"
#> HSPC_392 HSPC_398 HSPC_404 HSPC_410 HSPC_416 HSPC_422 HSPC_380 HSPC_387 HSPC_393
#> "032" "032" "011" "012" "031" "032" "032" "0412" "0411"
#> HSPC_399 HSPC_405 HSPC_411 HSPC_417 HSPC_423 HSPC_381 HSPC_388 HSPC_394 HSPC_400
#> "031" "032" "012" "012" "012" "0211" "012" "0211" "0412"
#> HSPC_406 HSPC_412 HSPC_418 HSPC_424 HSPC_382 HSPC_389 HSPC_395 HSPC_401 HSPC_407
#> "042" "0131" "031" "0413" "012" "014" "043" "0211" "0131"
#> HSPC_413 HSPC_419 HSPC_425 HSPC_383 HSPC_390 HSPC_396 HSPC_402 HSPC_408 HSPC_414
#> "042" "0131" "0413" "022" "042" "032" "032" "011" "0211"
#> HSPC_420 HSPC_426 HSPC_384 Prog_385 Prog_391 Prog_397 Prog_403 Prog_409 Prog_415
#> "012" "042" "0211" "011" "0213" "011" "011" "011" "011"
#> Prog_421 Prog_379 Prog_386 Prog_392 Prog_398 Prog_404 Prog_410 Prog_416 Prog_422
#> "011" "011" "011" "012" "011" "011" "011" "011" "0413"
#> Prog_380 Prog_387 Prog_393 Prog_399 Prog_405 Prog_411 Prog_417 Prog_423 Prog_381
#> "011" "0131" "011" "012" "012" "042" "0411" "0412" "011"
#> Prog_388 Prog_394 Prog_400 Prog_406 Prog_412 Prog_418 Prog_424 Prog_382 Prog_389
#> "011" "033" "0211" "011" "012" "014" "011" "031" "0132"
#> Prog_395 Prog_401 Prog_407 Prog_413 Prog_419 Prog_425 Prog_383 Prog_390 Prog_396
#> "011" "0132" "033" "012" "011" "014" "011" "043" "014"
#> Prog_402 Prog_408 Prog_414 Prog_420 Prog_426 Prog_384 HSPC_433 HSPC_439 HSPC_445
#> "0412" "014" "0131" "012" "012" "0411" "0212" "0212" "0212"
#> HSPC_451 HSPC_457 HSPC_463 LT-HSC_109 HSPC_427 HSPC_434 HSPC_440 HSPC_446 HSPC_452
#> "023" "022" "032" "022" "023" "0213" "042" "022" "0211"
#> HSPC_458 HSPC_464 LT-HSC_110 HSPC_428 HSPC_435 HSPC_441 HSPC_447 HSPC_453 HSPC_459
#> "0211" "0211" "031" "0212" "031" "031" "033" "032" "031"
#> HSPC_465 LT-HSC_111 HSPC_429 HSPC_436 HSPC_442 HSPC_448 HSPC_454 HSPC_460 HSPC_466
#> "031" "022" "0211" "0132" "012" "031" "0132" "031" "042"
#> LT-HSC_112 HSPC_430 HSPC_437 HSPC_443 HSPC_449 HSPC_455 HSPC_461 HSPC_467 LT-HSC_113
#> "032" "031" "0211" "031" "031" "022" "042" "031" "032"
#> HSPC_431 HSPC_438 HSPC_444 HSPC_450 HSPC_456 HSPC_462 HSPC_468 LT-HSC_114 HSPC_432
#> "031" "0213" "022" "022" "012" "031" "031" "023" "022"
#> Prog_433 Prog_439 Prog_445 Prog_451 Prog_457 Prog_463 LT-HSC_115 Prog_427 Prog_434
#> "031" "033" "032" "0131" "014" "033" "012" "022" "011"
#> Prog_440 Prog_446 Prog_452 Prog_458 Prog_464 LT-HSC_116 Prog_428 Prog_435 Prog_441
#> "043" "032" "0212" "043" "032" "031" "012" "0411" "012"
#> Prog_447 Prog_453 Prog_459 Prog_465 LT-HSC_117 Prog_429 Prog_436 Prog_442 Prog_448
#> "012" "014" "033" "043" "031" "011" "012" "0211" "033"
#> Prog_454 Prog_460 Prog_466 LT-HSC_118 Prog_430 Prog_437 Prog_443 Prog_449 Prog_455
#> "0412" "042" "0411" "0211" "011" "0132" "0131" "011" "031"
#> Prog_461 Prog_467 LT-HSC_119 Prog_431 Prog_438 Prog_444 Prog_450 Prog_456 Prog_462
#> "022" "033" "0213" "033" "022" "011" "012" "012" "042"
#> Prog_468 LT-HSC_120 Prog_432 HSPC_475 HSPC_481 HSPC_487 HSPC_493 HSPC_499 HSPC_505
#> "0411" "0413" "043" "022" "023" "0212" "022" "022" "042"
#> LT-HSC_121 HSPC_469 HSPC_476 HSPC_482 HSPC_488 HSPC_494 HSPC_500 HSPC_506 LT-HSC_122
#> "0213" "023" "0211" "022" "022" "022" "022" "022" "042"
#> HSPC_470 HSPC_477 HSPC_483 HSPC_489 HSPC_495 HSPC_501 HSPC_507 LT-HSC_123 HSPC_471
#> "022" "012" "022" "042" "043" "023" "022" "022" "022"
#> HSPC_478 HSPC_484 HSPC_490 HSPC_496 HSPC_502 HSPC_508 LT-HSC_124 HSPC_472 HSPC_479
#> "022" "0211" "031" "031" "032" "0131" "031" "032" "031"
#> HSPC_485 HSPC_491 HSPC_497 HSPC_503 HSPC_509 LT-HSC_125 HSPC_473 HSPC_480 HSPC_486
#> "012" "0412" "022" "012" "042" "031" "031" "032" "042"
#> HSPC_492 HSPC_498 HSPC_504 HSPC_510 LT-HSC_126 HSPC_474 Prog_475 Prog_481 Prog_487
#> "032" "031" "022" "0412" "032" "032" "0131" "033" "0131"
#> Prog_493 Prog_499 Prog_505 LT-HSC_127 Prog_469 Prog_476 Prog_482 Prog_488 Prog_494
#> "012" "012" "0131" "0212" "042" "012" "012" "0131" "043"
#> Prog_500 Prog_506 LT-HSC_128 Prog_470 Prog_477 Prog_483 Prog_489 Prog_495 Prog_501
#> "0131" "012" "031" "012" "011" "043" "012" "032" "012"
#> Prog_507 LT-HSC_129 Prog_471 Prog_478 Prog_484 Prog_490 Prog_496 Prog_502 Prog_508
#> "0411" "0211" "012" "011" "012" "043" "033" "011" "011"
#> LT-HSC_130 Prog_472 Prog_479 Prog_485 Prog_491 Prog_497 Prog_503 Prog_509 LT-HSC_131
#> "0132" "043" "012" "0132" "0131" "0411" "043" "031" "031"
#> Prog_473 Prog_480 Prog_486 Prog_492 Prog_498 Prog_504 Prog_510 LT-HSC_132 Prog_474
#> "012" "023" "012" "031" "0213" "012" "042" "014" "032"
#> HSPC_517 HSPC_523 HSPC_529 HSPC_535 HSPC_541 HSPC_547 LT-HSC_133 HSPC_511 HSPC_518
#> "023" "032" "0211" "022" "022" "032" "0212" "023" "022"
#> HSPC_524 HSPC_530 HSPC_536 HSPC_542 HSPC_548 LT-HSC_134 HSPC_512 HSPC_519 HSPC_525
#> "022" "022" "0211" "0211" "022" "023" "032" "0211" "023"
#> HSPC_531 HSPC_537 HSPC_543 HSPC_549 LT-HSC_135 HSPC_513 HSPC_520 HSPC_526 HSPC_532
#> "022" "042" "042" "022" "022" "0212" "042" "031" "042"
#> HSPC_538 HSPC_544 HSPC_550 LT-HSC_136 HSPC_514 HSPC_521 HSPC_527 HSPC_533 HSPC_539
#> "031" "012" "042" "023" "031" "022" "012" "032" "022"
#> HSPC_545 HSPC_551 LT-HSC_137 HSPC_515 HSPC_522 HSPC_528 HSPC_534 HSPC_540 HSPC_546
#> "022" "042" "022" "031" "022" "0413" "031" "032" "022"
#> HSPC_552 LT-HSC_138 HSPC_516 Prog_517 Prog_523 Prog_529 Prog_535 Prog_541 Prog_547
#> "042" "022" "032" "033" "011" "0131" "011" "0131" "0132"
#> LT-HSC_139 Prog_511 Prog_518 Prog_524 Prog_530 Prog_536 Prog_542 Prog_548 LT-HSC_140
#> "031" "031" "0413" "042" "012" "011" "0413" "011" "022"
#> Prog_512 Prog_519 Prog_525 Prog_531 Prog_537 Prog_543 Prog_549 LT-HSC_141 Prog_513
#> "0411" "042" "043" "0131" "022" "014" "0413" "0211" "033"
#> Prog_520 Prog_526 Prog_532 Prog_538 Prog_544 Prog_550 LT-HSC_142 Prog_514 Prog_521
#> "0131" "023" "022" "0212" "023" "012" "012" "012" "012"
#> Prog_527 Prog_533 Prog_539 Prog_545 Prog_551 LT-HSC_143 Prog_515 Prog_522 Prog_528
#> "012" "022" "0411" "014" "012" "0132" "043" "022" "014"
#> Prog_534 Prog_540 Prog_546 Prog_552 LT-HSC_144 Prog_516 HSPC_559 HSPC_565 HSPC_571
#> "043" "023" "023" "0412" "042" "011" "022" "023" "031"
#> HSPC_577 HSPC_583 HSPC_589 LT-HSC_145 HSPC_553 HSPC_560 HSPC_566 HSPC_572 HSPC_578
#> "022" "0211" "022" "022" "0131" "022" "022" "023" "022"
#> HSPC_584 HSPC_590 LT-HSC_146 HSPC_554 HSPC_561 HSPC_567 HSPC_573 HSPC_579 HSPC_585
#> "022" "042" "031" "022" "0211" "031" "022" "031" "022"
#> HSPC_591 LT-HSC_147 HSPC_555 HSPC_562 HSPC_568 HSPC_574 HSPC_580 HSPC_586 HSPC_592
#> "023" "022" "022" "023" "022" "012" "032" "032" "031"
#> LT-HSC_148 HSPC_556 HSPC_563 HSPC_569 HSPC_575 HSPC_581 HSPC_587 HSPC_593 LT-HSC_149
#> "042" "032" "031" "0413" "031" "0211" "0211" "022" "022"
#> HSPC_557 HSPC_564 HSPC_570 HSPC_576 HSPC_582 HSPC_588 HSPC_594 LT-HSC_150 HSPC_558
#> "032" "0211" "0211" "022" "022" "0212" "022" "022" "0211"
#> Prog_559 Prog_565 Prog_571 Prog_577 Prog_583 Prog_589 LT-HSC_151 Prog_553 Prog_560
#> "012" "012" "012" "012" "023" "023" "032" "043" "012"
#> Prog_566 Prog_572 Prog_578 Prog_584 Prog_590 LT-HSC_152 Prog_554 Prog_561 Prog_567
#> "014" "032" "0413" "012" "012" "022" "031" "042" "012"
#> Prog_573 Prog_579 Prog_585 Prog_591 LT-HSC_153 Prog_555 Prog_562 Prog_568 Prog_574
#> "023" "012" "033" "023" "022" "031" "011" "033" "012"
#> Prog_580 Prog_586 Prog_592 LT-HSC_154 Prog_556 Prog_563 Prog_569 Prog_575 Prog_581
#> "031" "043" "011" "0211" "033" "0213" "0131" "011" "012"
#> Prog_587 Prog_593 LT-HSC_155 Prog_557 Prog_564 Prog_570 Prog_576 Prog_582 Prog_588
#> "0132" "012" "0211" "012" "031" "0411" "014" "012" "031"
#> Prog_594 LT-HSC_156 Prog_558 HSPC_601 HSPC_607 HSPC_613 HSPC_619 HSPC_625 HSPC_631
#> "033" "012" "031" "042" "023" "042" "0211" "022" "0412"
#> LT-HSC_157 HSPC_595 HSPC_602 HSPC_608 HSPC_614 HSPC_620 HSPC_626 HSPC_632 LT-HSC_158
#> "023" "031" "022" "022" "042" "022" "023" "0211" "022"
#> HSPC_596 HSPC_603 HSPC_609 HSPC_615 HSPC_621 HSPC_627 HSPC_633 LT-HSC_159 HSPC_597
#> "042" "032" "023" "023" "0211" "042" "023" "0411" "042"
#> HSPC_604 HSPC_610 HSPC_616 HSPC_622 HSPC_628 HSPC_634 LT-HSC_160 HSPC_598 HSPC_605
#> "022" "022" "0211" "0211" "042" "042" "023" "042" "0213"
#> HSPC_611 HSPC_617 HSPC_623 HSPC_629 HSPC_635 LT-HSC_161 HSPC_599 HSPC_606 HSPC_612
#> "0211" "032" "042" "042" "042" "023" "022" "031" "031"
#> HSPC_618 HSPC_624 HSPC_630 HSPC_636 LT-HSC_162 HSPC_600 Prog_601 Prog_607 Prog_613
#> "022" "032" "022" "031" "023" "023" "0211" "012" "033"
#> Prog_619 Prog_625 Prog_631 LT-HSC_163 Prog_595 Prog_602 Prog_608 Prog_614 Prog_620
#> "022" "0413" "032" "022" "022" "0132" "011" "0132" "042"
#> Prog_626 Prog_632 LT-HSC_164 Prog_596 Prog_603 Prog_609 Prog_615 Prog_621 Prog_627
#> "012" "012" "031" "033" "011" "012" "0411" "012" "031"
#> Prog_633 LT-HSC_165 Prog_597 Prog_604 Prog_610 Prog_616 Prog_622 Prog_628 Prog_634
#> "043" "022" "033" "033" "033" "011" "012" "012" "043"
#> LT-HSC_166 Prog_598 Prog_605 Prog_611 Prog_617 Prog_623 Prog_629 Prog_635 LT-HSC_167
#> "042" "012" "014" "033" "031" "0132" "012" "033" "022"
#> Prog_599 Prog_606 Prog_612 Prog_618 Prog_624 Prog_630 Prog_636 LT-HSC_168 Prog_600
#> "012" "031" "0131" "012" "012" "0131" "0213" "0131" "012"
#> HSPC_643 HSPC_649 HSPC_655 HSPC_661 HSPC_667 HSPC_673 LT-HSC_169 HSPC_637 HSPC_644
#> "042" "032" "0212" "042" "022" "022" "023" "031" "0132"
#> HSPC_650 HSPC_656 HSPC_662 HSPC_668 HSPC_674 LT-HSC_170 HSPC_638 HSPC_645 HSPC_651
#> "0211" "022" "022" "032" "031" "042" "0132" "032" "0411"
#> HSPC_657 HSPC_663 HSPC_669 HSPC_675 LT-HSC_171 HSPC_639 HSPC_646 HSPC_652 HSPC_658
#> "023" "0412" "022" "0212" "042" "031" "031" "042" "0412"
#> HSPC_664 HSPC_670 HSPC_676 LT-HSC_172 HSPC_640 HSPC_647 HSPC_653 HSPC_659 HSPC_665
#> "032" "023" "022" "022" "031" "022" "0211" "0211" "042"
#> HSPC_671 HSPC_677 LT-HSC_173 HSPC_641 HSPC_648 HSPC_654 HSPC_660 HSPC_666 HSPC_672
#> "032" "023" "022" "031" "022" "042" "043" "0413" "032"
#> HSPC_678 LT-HSC_174 HSPC_642 Prog_643 Prog_649 Prog_655 Prog_661 Prog_667 Prog_673
#> "022" "031" "0211" "0412" "011" "011" "0131" "043" "042"
#> LT-HSC_175 Prog_637 Prog_644 Prog_650 Prog_656 Prog_662 Prog_668 Prog_674 LT-HSC_176
#> "0211" "014" "033" "012" "033" "033" "023" "033" "022"
#> Prog_638 Prog_645 Prog_651 Prog_657 Prog_663 Prog_669 Prog_675 LT-HSC_177 Prog_639
#> "011" "043" "031" "011" "011" "023" "012" "022" "014"
#> Prog_646 Prog_652 Prog_658 Prog_664 Prog_670 Prog_676 LT-HSC_178 Prog_640 Prog_647
#> "012" "012" "012" "023" "012" "033" "0211" "011" "043"
#> Prog_653 Prog_659 Prog_665 Prog_671 Prog_677 LT-HSC_179 Prog_641 Prog_648 Prog_654
#> "043" "033" "031" "031" "011" "031" "023" "042" "0132"
#> Prog_660 Prog_666 Prog_672 Prog_678 LT-HSC_180 Prog_642 HSPC_685 HSPC_691 HSPC_697
#> "031" "033" "031" "0411" "043" "032" "0213" "0212" "0413"
#> HSPC_703 HSPC_709 HSPC_715 LT-HSC_181 HSPC_679 HSPC_686 HSPC_692 HSPC_698 HSPC_704
#> "022" "023" "0212" "0212" "031" "0211" "023" "022" "022"
#> HSPC_710 HSPC_716 LT-HSC_182 HSPC_680 HSPC_687 HSPC_693 HSPC_699 HSPC_705 HSPC_711
#> "0211" "022" "0213" "022" "023" "023" "022" "012" "0211"
#> HSPC_717 LT-HSC_183 HSPC_681 HSPC_688 HSPC_694 HSPC_700 HSPC_706 HSPC_712 HSPC_718
#> "0412" "031" "042" "0211" "0211" "0413" "033" "0211" "0211"
#> LT-HSC_184 HSPC_682 HSPC_689 HSPC_695 HSPC_701 HSPC_707 HSPC_713 HSPC_719 LT-HSC_185
#> "031" "012" "022" "0132" "042" "042" "0212" "022" "023"
#> HSPC_683 HSPC_690 HSPC_696 HSPC_702 HSPC_708 HSPC_714 HSPC_720 LT-HSC_186 HSPC_684
#> "0412" "022" "043" "022" "031" "022" "012" "0211" "023"
#> Prog_685 Prog_691 Prog_697 Prog_703 Prog_709 Prog_715 LT-HSC_187 Prog_679 Prog_686
#> "012" "0213" "011" "043" "014" "012" "031" "012" "0413"
#> Prog_692 Prog_698 Prog_704 Prog_710 Prog_716 LT-HSC_188 Prog_680 Prog_687 Prog_693
#> "032" "0131" "031" "031" "033" "031" "012" "012" "012"
#> Prog_699 Prog_705 Prog_711 Prog_717 LT-HSC_189 Prog_681 Prog_688 Prog_694 Prog_700
#> "012" "012" "033" "012" "0211" "0131" "011" "033" "011"
#> Prog_706 Prog_712 Prog_718 LT-HSC_190 Prog_682 Prog_689 Prog_695 Prog_701 Prog_707
#> "0131" "0132" "012" "023" "0132" "033" "011" "011" "033"
#> Prog_713 Prog_719 LT-HSC_191 Prog_683 Prog_690 Prog_696 Prog_702 Prog_708 Prog_714
#> "0131" "011" "031" "023" "033" "0411" "014" "014" "014"
#> Prog_720 LT-HSC_192 Prog_684 HSPC_727 HSPC_733 HSPC_739 HSPC_745 HSPC_751 HSPC_757
#> "014" "012" "032" "022" "022" "023" "023" "022" "022"
#> LT-HSC_193 HSPC_721 HSPC_728 HSPC_734 HSPC_740 HSPC_746 HSPC_752 HSPC_758 LT-HSC_194
#> "022" "023" "0213" "012" "022" "023" "023" "032" "022"
#> HSPC_722 HSPC_729 HSPC_735 HSPC_741 HSPC_747 HSPC_753 HSPC_759 LT-HSC_195 HSPC_723
#> "031" "031" "042" "0211" "022" "031" "032" "032" "032"
#> HSPC_730 HSPC_736 HSPC_742 HSPC_748 HSPC_754 HSPC_760 LT-HSC_196 HSPC_724 HSPC_731
#> "031" "032" "032" "022" "0213" "042" "0211" "032" "0412"
#> HSPC_737 HSPC_743 HSPC_749 HSPC_755 HSPC_761 LT-HSC_197 HSPC_725 HSPC_732 HSPC_738
#> "012" "031" "022" "031" "032" "022" "023" "032" "022"
#> HSPC_744 HSPC_750 HSPC_756 HSPC_762 LT-HSC_198 HSPC_726 Prog_727 Prog_733 Prog_739
#> "042" "031" "022" "042" "022" "0213" "012" "033" "0412"
#> Prog_745 Prog_751 Prog_757 LT-HSC_199 Prog_721 Prog_728 Prog_734 Prog_740 Prog_746
#> "033" "033" "0412" "0211" "014" "032" "014" "033" "0411"
#> Prog_752 Prog_758 LT-HSC_200 Prog_722 Prog_729 Prog_735 Prog_741 Prog_747 Prog_753
#> "033" "033" "022" "014" "023" "012" "0213" "033" "0131"
#> Prog_759 LT-HSC_201 Prog_723 Prog_730 Prog_736 Prog_742 Prog_748 Prog_754 Prog_760
#> "012" "022" "011" "011" "0131" "0213" "0413" "0131" "012"
#> LT-HSC_202 Prog_724 Prog_731 Prog_737 Prog_743 Prog_749 Prog_755 Prog_761 LT-HSC_203
#> "031" "033" "011" "031" "012" "043" "0213" "0412" "0213"
#> Prog_725 Prog_732 Prog_738 Prog_744 Prog_750 Prog_756 Prog_762 LT-HSC_204 Prog_726
#> "031" "043" "033" "033" "0413" "043" "031" "032" "031"
#> HSPC_769 HSPC_775 HSPC_781 HSPC_787 HSPC_793 HSPC_799 LT-HSC_205 HSPC_763 HSPC_770
#> "023" "023" "022" "023" "0212" "023" "023" "0212" "042"
#> HSPC_776 HSPC_782 HSPC_788 HSPC_794 HSPC_800 LT-HSC_206 HSPC_764 HSPC_771 HSPC_777
#> "023" "022" "023" "032" "0413" "022" "022" "032" "032"
#> HSPC_783 HSPC_789 HSPC_795 HSPC_801 LT-HSC_207 HSPC_765 HSPC_772 HSPC_778 HSPC_784
#> "022" "042" "032" "031" "042" "023" "042" "031" "031"
#> HSPC_790 HSPC_796 HSPC_802 LT-HSC_208 HSPC_766 HSPC_773 HSPC_779 HSPC_785 HSPC_791
#> "042" "012" "022" "022" "012" "032" "042" "031" "043"
#> HSPC_797 HSPC_803 LT-HSC_209 HSPC_767 HSPC_774 HSPC_780 HSPC_786 HSPC_792 HSPC_798
#> "032" "022" "0211" "012" "032" "031" "031" "0213" "022"
#> HSPC_804 LT-HSC_210 HSPC_768 Prog_769 Prog_775 Prog_781 Prog_787 Prog_793 Prog_799
#> "022" "022" "023" "012" "033" "012" "043" "0132" "033"
#> LT-HSC_211 Prog_763 Prog_770 Prog_776 Prog_782 Prog_788 Prog_794 Prog_800 LT-HSC_212
#> "042" "012" "014" "011" "012" "011" "012" "012" "031"
#> Prog_764 Prog_771 Prog_777 Prog_783 Prog_789 Prog_795 Prog_801 LT-HSC_213 Prog_765
#> "012" "014" "012" "014" "012" "012" "0132" "022" "0131"
#> Prog_772 Prog_778 Prog_784 Prog_790 Prog_796 Prog_802 LT-HSC_214 Prog_766 Prog_773
#> "012" "023" "032" "011" "0412" "014" "031" "0212" "0212"
#> Prog_779 Prog_785 Prog_791 Prog_797 Prog_803 LT-HSC_215 Prog_767 Prog_774 Prog_780
#> "0131" "033" "012" "031" "043" "032" "011" "012" "011"
#> Prog_786 Prog_792 Prog_798 Prog_804 LT-HSC_216 Prog_768 HSPC_811 HSPC_817 HSPC_823
#> "011" "0131" "0131" "012" "0411" "012" "0212" "0212" "0212"
#> HSPC_829 HSPC_835 HSPC_841 HSPC_847 HSPC_805 HSPC_812 HSPC_818 HSPC_824 HSPC_830
#> "0213" "032" "043" "023" "0212" "012" "031" "031" "0212"
#> HSPC_836 HSPC_842 HSPC_848 HSPC_806 HSPC_813 HSPC_819 HSPC_825 HSPC_831 HSPC_837
#> "023" "023" "022" "023" "012" "042" "031" "031" "0412"
#> HSPC_843 HSPC_849 HSPC_807 HSPC_814 HSPC_820 HSPC_826 HSPC_832 HSPC_838 HSPC_844
#> "031" "022" "012" "0413" "012" "031" "032" "032" "022"
#> HSPC_850 HSPC_808 HSPC_815 HSPC_821 HSPC_827 HSPC_833 HSPC_839 HSPC_845 HSPC_851
#> "0211" "012" "032" "042" "022" "012" "0413" "031" "023"
#> HSPC_809 HSPC_816 HSPC_822 HSPC_828 HSPC_834 HSPC_840 HSPC_846 HSPC_852 HSPC_810
#> "022" "042" "031" "032" "032" "022" "042" "022" "022"
#> Prog_811 Prog_817 Prog_823 Prog_829 Prog_835 Prog_841 Prog_847 Prog_805 Prog_812
#> "014" "0132" "031" "012" "014" "0411" "012" "042" "023"
#> Prog_818 Prog_824 Prog_830 Prog_836 Prog_842 Prog_848 Prog_806 Prog_813 Prog_819
#> "014" "012" "011" "0131" "014" "022" "033" "011" "011"
#> Prog_825 Prog_831 Prog_837 Prog_843 Prog_849 Prog_807 Prog_814 Prog_820 Prog_826
#> "011" "014" "014" "0131" "042" "014" "011" "0132" "011"
#> Prog_832 Prog_838 Prog_844 Prog_850 Prog_808 Prog_815 Prog_821 Prog_827 Prog_833
#> "012" "011" "014" "014" "012" "014" "011" "033" "012"
#> Prog_839 Prog_845 Prog_851 Prog_809 Prog_816 Prog_822 Prog_828 Prog_834 Prog_840
#> "0131" "0131" "033" "0132" "012" "011" "011" "012" "012"
#> Prog_846 Prog_852 Prog_810
#> "012" "0411" "0131"
get_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 2134))
#> HSPC_007 HSPC_013 HSPC_019 HSPC_025 HSPC_031 HSPC_037 LT-HSC_001 HSPC_001 HSPC_008
#> "0213" "023" "0211" "042" "03" "042" "023" "012" "042"
#> HSPC_014 HSPC_020 HSPC_026 HSPC_032 HSPC_038 LT-HSC_002 HSPC_002 HSPC_009 HSPC_015
#> "022" "042" "0412" "0211" "022" "042" "022" "022" "023"
#> HSPC_021 HSPC_027 HSPC_033 HSPC_039 LT-HSC_003 HSPC_003 HSPC_010 HSPC_016 HSPC_022
#> "022" "03" "03" "0211" "023" "012" "0213" "012" "0412"
#> HSPC_028 HSPC_034 HSPC_040 LT-HSC_004 HSPC_004 HSPC_011 HSPC_017 HSPC_023 HSPC_029
#> "03" "012" "03" "022" "03" "042" "022" "042" "0211"
#> HSPC_035 HSPC_041 LT-HSC_005 HSPC_005 HSPC_012 HSPC_018 HSPC_024 HSPC_030 HSPC_036
#> "022" "042" "0211" "0211" "042" "042" "022" "03" "012"
#> HSPC_042 LT-HSC_006 HSPC_006 Prog_007 Prog_013 Prog_019 Prog_025 Prog_031 Prog_037
#> "03" "022" "0412" "012" "012" "0131" "0411" "03" "03"
#> LT-HSC_007 Prog_001 Prog_008 Prog_014 Prog_020 Prog_026 Prog_032 Prog_038 LT-HSC_008
#> "042" "043" "011" "011" "014" "03" "014" "014" "03"
#> Prog_002 Prog_009 Prog_015 Prog_021 Prog_027 Prog_033 Prog_039 LT-HSC_009 Prog_003
#> "012" "011" "012" "014" "012" "011" "011" "022" "012"
#> Prog_010 Prog_016 Prog_022 Prog_028 Prog_034 Prog_040 LT-HSC_010 Prog_004 Prog_011
#> "0412" "0411" "0411" "011" "0211" "042" "0412" "03" "014"
#> Prog_017 Prog_023 Prog_029 Prog_035 Prog_041 LT-HSC_011 Prog_005 Prog_012 Prog_018
#> "012" "012" "014" "011" "0213" "0213" "0213" "022" "022"
#> Prog_024 Prog_030 Prog_036 Prog_042 LT-HSC_012 Prog_006 HSPC_049 HSPC_055 HSPC_061
#> "014" "0411" "0412" "0411" "0411" "011" "03" "042" "042"
#> HSPC_067 HSPC_073 HSPC_079 LT-HSC_013 HSPC_043 HSPC_050 HSPC_056 HSPC_062 HSPC_068
#> "042" "022" "0412" "022" "042" "043" "022" "0413" "022"
#> HSPC_074 HSPC_080 LT-HSC_014 HSPC_044 HSPC_051 HSPC_057 HSPC_063 HSPC_069 HSPC_075
#> "022" "03" "022" "043" "03" "022" "0412" "03" "022"
#> HSPC_081 LT-HSC_015 HSPC_045 HSPC_052 HSPC_058 HSPC_064 HSPC_070 HSPC_076 HSPC_082
#> "03" "022" "042" "043" "03" "0413" "03" "03" "042"
#> LT-HSC_016 HSPC_046 HSPC_053 HSPC_059 HSPC_065 HSPC_071 HSPC_077 HSPC_083 LT-HSC_017
#> "022" "03" "012" "0211" "03" "0413" "012" "022" "022"
#> HSPC_047 HSPC_054 HSPC_060 HSPC_066 HSPC_072 HSPC_078 HSPC_084 LT-HSC_018 HSPC_048
#> "023" "03" "03" "03" "0413" "043" "042" "022" "03"
#> Prog_049 Prog_055 Prog_061 Prog_067 Prog_073 Prog_079 LT-HSC_019 Prog_043 Prog_050
#> "011" "012" "011" "014" "03" "011" "0211" "0132" "012"
#> Prog_056 Prog_062 Prog_068 Prog_074 Prog_080 LT-HSC_020 Prog_044 Prog_051 Prog_057
#> "012" "042" "03" "0411" "043" "03" "03" "014" "0131"
#> Prog_063 Prog_069 Prog_075 Prog_081 LT-HSC_021 Prog_045 Prog_052 Prog_058 Prog_064
#> "043" "012" "012" "011" "0413" "0132" "043" "014" "014"
#> Prog_070 Prog_076 Prog_082 LT-HSC_022 Prog_046 Prog_053 Prog_059 Prog_065 Prog_071
#> "0412" "014" "011" "022" "011" "011" "012" "0131" "012"
#> Prog_077 Prog_083 LT-HSC_023 Prog_047 Prog_054 Prog_060 Prog_066 Prog_072 Prog_078
#> "012" "012" "022" "012" "0411" "0213" "014" "03" "014"
#> Prog_084 LT-HSC_024 Prog_048 HSPC_091 HSPC_097 HSPC_103 HSPC_109 HSPC_115 HSPC_121
#> "011" "03" "03" "0212" "023" "022" "043" "022" "023"
#> LT-HSC_025 HSPC_085 HSPC_092 HSPC_098 HSPC_104 HSPC_110 HSPC_116 HSPC_122 LT-HSC_026
#> "0212" "042" "0212" "043" "023" "043" "0211" "03" "022"
#> HSPC_086 HSPC_093 HSPC_099 HSPC_105 HSPC_111 HSPC_117 HSPC_123 LT-HSC_027 HSPC_087
#> "0211" "0211" "042" "022" "022" "042" "022" "023" "022"
#> HSPC_094 HSPC_100 HSPC_106 HSPC_112 HSPC_118 HSPC_124 LT-HSC_028 HSPC_088 HSPC_095
#> "012" "03" "022" "0211" "03" "0211" "03" "03" "022"
#> HSPC_101 HSPC_107 HSPC_113 HSPC_119 HSPC_125 LT-HSC_029 HSPC_089 HSPC_096 HSPC_102
#> "012" "042" "023" "023" "03" "0212" "03" "043" "012"
#> HSPC_108 HSPC_114 HSPC_120 HSPC_126 LT-HSC_030 HSPC_090 Prog_091 Prog_097 Prog_103
#> "03" "03" "03" "03" "0212" "012" "011" "012" "012"
#> Prog_109 Prog_115 Prog_121 LT-HSC_031 Prog_085 Prog_092 Prog_098 Prog_104 Prog_110
#> "0412" "014" "0213" "03" "012" "03" "011" "0211" "011"
#> Prog_116 Prog_122 LT-HSC_032 Prog_086 Prog_093 Prog_099 Prog_105 Prog_111 Prog_117
#> "012" "03" "011" "0212" "012" "012" "012" "014" "0132"
#> Prog_123 LT-HSC_033 Prog_087 Prog_094 Prog_100 Prog_106 Prog_112 Prog_118 Prog_124
#> "012" "03" "012" "014" "011" "03" "011" "0412" "03"
#> LT-HSC_034 Prog_088 Prog_095 Prog_101 Prog_107 Prog_113 Prog_119 Prog_125 LT-HSC_035
#> "03" "043" "011" "0131" "011" "012" "011" "03" "0212"
#> Prog_089 Prog_096 Prog_102 Prog_108 Prog_114 Prog_120 Prog_126 LT-HSC_036 Prog_090
#> "014" "03" "03" "0411" "0413" "023" "014" "03" "011"
#> HSPC_133 HSPC_139 HSPC_145 HSPC_151 HSPC_157 HSPC_163 LT-HSC_037 HSPC_127 HSPC_134
#> "022" "022" "023" "042" "043" "023" "023" "0412" "023"
#> HSPC_140 HSPC_146 HSPC_152 HSPC_158 HSPC_164 LT-HSC_038 HSPC_128 HSPC_135 HSPC_141
#> "023" "0412" "022" "042" "022" "023" "023" "03" "022"
#> HSPC_147 HSPC_153 HSPC_159 HSPC_165 LT-HSC_039 HSPC_129 HSPC_136 HSPC_142 HSPC_148
#> "023" "022" "042" "043" "022" "0211" "042" "042" "043"
#> HSPC_154 HSPC_160 HSPC_166 LT-HSC_040 HSPC_130 HSPC_137 HSPC_143 HSPC_149 HSPC_155
#> "043" "0211" "042" "022" "042" "0211" "022" "022" "023"
#> HSPC_161 HSPC_167 LT-HSC_041 HSPC_131 HSPC_138 HSPC_144 HSPC_150 HSPC_156 HSPC_162
#> "042" "023" "022" "022" "012" "03" "0211" "012" "03"
#> HSPC_168 LT-HSC_042 HSPC_132 Prog_133 Prog_139 Prog_145 Prog_151 Prog_157 Prog_163
#> "0413" "022" "0132" "012" "011" "012" "03" "012" "011"
#> LT-HSC_043 Prog_127 Prog_134 Prog_140 Prog_146 Prog_152 Prog_158 Prog_164 LT-HSC_044
#> "0132" "03" "043" "011" "011" "043" "011" "0213" "043"
#> Prog_128 Prog_135 Prog_141 Prog_147 Prog_153 Prog_159 Prog_165 LT-HSC_045 Prog_129
#> "012" "03" "0132" "0211" "012" "0412" "043" "0412" "0131"
#> Prog_136 Prog_142 Prog_148 Prog_154 Prog_160 Prog_166 LT-HSC_046 Prog_130 Prog_137
#> "0132" "03" "023" "03" "022" "014" "03" "0131" "012"
#> Prog_143 Prog_149 Prog_155 Prog_161 Prog_167 LT-HSC_047 Prog_131 Prog_138 Prog_144
#> "0131" "0413" "012" "03" "012" "0213" "03" "0211" "043"
#> Prog_150 Prog_156 Prog_162 Prog_168 LT-HSC_048 Prog_132 HSPC_175 HSPC_181 HSPC_187
#> "0131" "0212" "0412" "0131" "023" "0131" "042" "022" "022"
#> HSPC_193 HSPC_199 HSPC_205 LT-HSC_049 HSPC_169 HSPC_176 HSPC_182 HSPC_188 HSPC_194
#> "03" "03" "022" "022" "042" "022" "023" "0211" "0211"
#> HSPC_200 HSPC_206 LT-HSC_050 HSPC_170 HSPC_177 HSPC_183 HSPC_189 HSPC_195 HSPC_201
#> "022" "012" "022" "023" "022" "03" "03" "012" "0211"
#> HSPC_207 LT-HSC_051 HSPC_171 HSPC_178 HSPC_184 HSPC_190 HSPC_196 HSPC_202 HSPC_208
#> "03" "022" "022" "03" "0212" "0413" "042" "03" "022"
#> LT-HSC_052 HSPC_172 HSPC_179 HSPC_185 HSPC_191 HSPC_197 HSPC_203 HSPC_209 LT-HSC_053
#> "012" "012" "012" "023" "022" "0211" "042" "0211" "0211"
#> HSPC_173 HSPC_180 HSPC_186 HSPC_192 HSPC_198 HSPC_204 HSPC_210 LT-HSC_054 HSPC_174
#> "023" "043" "03" "022" "03" "0412" "043" "022" "03"
#> Prog_175 Prog_181 Prog_187 Prog_193 Prog_199 Prog_205 LT-HSC_055 Prog_169 Prog_176
#> "0411" "0211" "03" "042" "03" "0413" "0132" "0211" "012"
#> Prog_182 Prog_188 Prog_194 Prog_200 Prog_206 LT-HSC_056 Prog_170 Prog_177 Prog_183
#> "043" "014" "023" "043" "012" "0131" "011" "042" "0132"
#> Prog_189 Prog_195 Prog_201 Prog_207 LT-HSC_057 Prog_171 Prog_178 Prog_184 Prog_190
#> "012" "042" "0412" "014" "03" "042" "011" "0131" "012"
#> Prog_196 Prog_202 Prog_208 LT-HSC_058 Prog_172 Prog_179 Prog_185 Prog_191 Prog_197
#> "011" "0213" "03" "03" "014" "0131" "011" "03" "0131"
#> Prog_203 Prog_209 LT-HSC_059 Prog_173 Prog_180 Prog_186 Prog_192 Prog_198 Prog_204
#> "0132" "0131" "0212" "043" "03" "012" "012" "0211" "023"
#> Prog_210 LT-HSC_060 Prog_174 HSPC_217 HSPC_223 HSPC_229 HSPC_235 HSPC_241 HSPC_247
#> "03" "0131" "0213" "0212" "022" "023" "022" "0211" "023"
#> LT-HSC_061 HSPC_211 HSPC_218 HSPC_224 HSPC_230 HSPC_236 HSPC_242 HSPC_248 LT-HSC_062
#> "0212" "042" "022" "022" "042" "043" "023" "022" "023"
#> HSPC_212 HSPC_219 HSPC_225 HSPC_231 HSPC_237 HSPC_243 HSPC_249 LT-HSC_063 HSPC_213
#> "023" "042" "022" "023" "022" "0412" "022" "03" "0413"
#> HSPC_220 HSPC_226 HSPC_232 HSPC_238 HSPC_244 HSPC_250 LT-HSC_064 HSPC_214 HSPC_221
#> "022" "0211" "023" "0212" "03" "0413" "011" "012" "03"
#> HSPC_227 HSPC_233 HSPC_239 HSPC_245 HSPC_251 LT-HSC_065 HSPC_215 HSPC_222 HSPC_228
#> "022" "042" "022" "022" "0413" "03" "0412" "042" "023"
#> HSPC_234 HSPC_240 HSPC_246 HSPC_252 LT-HSC_066 HSPC_216 Prog_217 Prog_223 Prog_229
#> "0211" "03" "022" "0213" "03" "012" "011" "042" "011"
#> Prog_235 Prog_241 Prog_247 LT-HSC_067 Prog_211 Prog_218 Prog_224 Prog_230 Prog_236
#> "023" "022" "03" "0213" "011" "012" "0132" "0413" "012"
#> Prog_242 Prog_248 LT-HSC_068 Prog_212 Prog_219 Prog_225 Prog_231 Prog_237 Prog_243
#> "014" "043" "012" "014" "0213" "03" "0132" "042" "0131"
#> Prog_249 LT-HSC_069 Prog_213 Prog_220 Prog_226 Prog_232 Prog_238 Prog_244 Prog_250
#> "011" "03" "043" "0213" "03" "03" "012" "03" "014"
#> LT-HSC_070 Prog_214 Prog_221 Prog_227 Prog_233 Prog_239 Prog_245 Prog_251 LT-HSC_071
#> "043" "0413" "011" "0132" "012" "011" "012" "0212" "03"
#> Prog_215 Prog_222 Prog_228 Prog_234 Prog_240 Prog_246 Prog_252 LT-HSC_072 Prog_216
#> "011" "03" "0131" "012" "012" "03" "03" "012" "011"
#> HSPC_259 HSPC_265 HSPC_271 HSPC_277 HSPC_283 HSPC_289 LT-HSC_073 HSPC_253 HSPC_260
#> "023" "022" "0412" "023" "022" "022" "023" "0413" "0211"
#> HSPC_266 HSPC_272 HSPC_278 HSPC_284 HSPC_290 LT-HSC_074 HSPC_254 HSPC_261 HSPC_267
#> "022" "0211" "042" "0211" "0413" "022" "022" "0132" "03"
#> HSPC_273 HSPC_279 HSPC_285 HSPC_291 LT-HSC_075 HSPC_255 HSPC_262 HSPC_268 HSPC_274
#> "0211" "043" "012" "03" "03" "03" "0212" "012" "022"
#> HSPC_280 HSPC_286 HSPC_292 LT-HSC_076 HSPC_256 HSPC_263 HSPC_269 HSPC_275 HSPC_281
#> "0412" "042" "0412" "042" "011" "0412" "0132" "0131" "023"
#> HSPC_287 HSPC_293 LT-HSC_077 HSPC_257 HSPC_264 HSPC_270 HSPC_276 HSPC_282 HSPC_288
#> "0413" "0412" "023" "0413" "022" "03" "03" "012" "012"
#> HSPC_294 LT-HSC_078 HSPC_258 Prog_259 Prog_265 Prog_271 Prog_277 Prog_283 Prog_289
#> "0413" "022" "012" "03" "011" "03" "03" "042" "0412"
#> LT-HSC_079 Prog_253 Prog_260 Prog_266 Prog_272 Prog_278 Prog_284 Prog_290 LT-HSC_080
#> "0211" "014" "012" "012" "012" "011" "014" "011" "03"
#> Prog_254 Prog_261 Prog_267 Prog_273 Prog_279 Prog_285 Prog_291 LT-HSC_081 Prog_255
#> "011" "014" "0131" "0131" "011" "014" "0411" "012" "012"
#> Prog_262 Prog_268 Prog_274 Prog_280 Prog_286 Prog_292 LT-HSC_082 Prog_256 Prog_263
#> "012" "012" "014" "03" "011" "012" "03" "042" "0131"
#> Prog_269 Prog_275 Prog_281 Prog_287 Prog_293 LT-HSC_083 Prog_257 Prog_264 Prog_270
#> "011" "012" "014" "0131" "03" "0212" "0213" "023" "0131"
#> Prog_276 Prog_282 Prog_288 Prog_294 LT-HSC_084 Prog_258 HSPC_301 HSPC_307 HSPC_313
#> "012" "011" "011" "012" "03" "0132" "023" "022" "042"
#> HSPC_319 HSPC_325 HSPC_331 LT-HSC_085 HSPC_295 HSPC_302 HSPC_308 HSPC_314 HSPC_320
#> "0212" "022" "022" "022" "0413" "023" "043" "042" "043"
#> HSPC_326 HSPC_332 LT-HSC_086 HSPC_296 HSPC_303 HSPC_309 HSPC_315 HSPC_321 HSPC_327
#> "022" "012" "042" "022" "012" "022" "022" "042" "012"
#> HSPC_333 LT-HSC_087 HSPC_297 HSPC_304 HSPC_310 HSPC_316 HSPC_322 HSPC_328 HSPC_334
#> "012" "0212" "022" "03" "022" "023" "03" "042" "022"
#> LT-HSC_088 HSPC_298 HSPC_305 HSPC_311 HSPC_317 HSPC_323 HSPC_329 HSPC_335 LT-HSC_089
#> "043" "03" "0412" "0212" "023" "03" "042" "022" "022"
#> HSPC_299 HSPC_306 HSPC_312 HSPC_318 HSPC_324 HSPC_330 HSPC_336 LT-HSC_090 HSPC_300
#> "03" "03" "0413" "022" "03" "03" "022" "03" "012"
#> Prog_301 Prog_307 Prog_313 Prog_319 Prog_325 Prog_331 LT-HSC_091 Prog_295 Prog_302
#> "0411" "0412" "0413" "0132" "012" "012" "011" "0412" "0212"
#> Prog_308 Prog_314 Prog_320 Prog_326 Prog_332 LT-HSC_092 Prog_296 Prog_303 Prog_309
#> "012" "03" "012" "011" "012" "0212" "012" "022" "022"
#> Prog_315 Prog_321 Prog_327 Prog_333 LT-HSC_093 Prog_297 Prog_304 Prog_310 Prog_316
#> "0411" "0411" "012" "043" "042" "043" "012" "0412" "0411"
#> Prog_322 Prog_328 Prog_334 LT-HSC_094 Prog_298 Prog_305 Prog_311 Prog_317 Prog_323
#> "043" "0411" "014" "042" "014" "0413" "043" "0212" "0411"
#> Prog_329 Prog_335 LT-HSC_095 Prog_299 Prog_306 Prog_312 Prog_318 Prog_324 Prog_330
#> "0411" "0413" "011" "011" "022" "011" "011" "011" "0132"
#> Prog_336 LT-HSC_096 Prog_300 HSPC_343 HSPC_349 HSPC_355 HSPC_361 HSPC_367 HSPC_373
#> "0132" "012" "0131" "0132" "03" "0213" "023" "022" "023"
#> LT-HSC_097 HSPC_337 HSPC_344 HSPC_350 HSPC_356 HSPC_362 HSPC_368 HSPC_374 LT-HSC_098
#> "0212" "022" "0412" "022" "043" "0411" "042" "03" "011"
#> HSPC_338 HSPC_345 HSPC_351 HSPC_357 HSPC_363 HSPC_369 HSPC_375 LT-HSC_099 HSPC_339
#> "011" "043" "043" "0211" "022" "0211" "0211" "023" "03"
#> HSPC_346 HSPC_352 HSPC_358 HSPC_364 HSPC_370 HSPC_376 LT-HSC_100 HSPC_340 HSPC_347
#> "012" "0412" "042" "042" "0131" "042" "011" "0213" "0211"
#> HSPC_353 HSPC_359 HSPC_365 HSPC_371 HSPC_377 LT-HSC_101 HSPC_341 HSPC_348 HSPC_354
#> "012" "03" "023" "012" "0413" "0411" "012" "03" "022"
#> HSPC_360 HSPC_366 HSPC_372 HSPC_378 LT-HSC_102 HSPC_342 Prog_343 Prog_349 Prog_355
#> "042" "0213" "042" "0212" "011" "0131" "0132" "0411" "0413"
#> Prog_361 Prog_367 Prog_373 LT-HSC_103 Prog_337 Prog_344 Prog_350 Prog_356 Prog_362
#> "014" "0131" "011" "0132" "011" "0211" "014" "011" "0412"
#> Prog_368 Prog_374 LT-HSC_104 Prog_338 Prog_345 Prog_351 Prog_357 Prog_363 Prog_369
#> "014" "014" "0212" "012" "0411" "014" "011" "014" "0411"
#> Prog_375 LT-HSC_105 Prog_339 Prog_346 Prog_352 Prog_358 Prog_364 Prog_370 Prog_376
#> "011" "0411" "011" "014" "011" "03" "011" "0411" "011"
#> LT-HSC_106 Prog_340 Prog_347 Prog_353 Prog_359 Prog_365 Prog_371 Prog_377 LT-HSC_107
#> "0412" "014" "0213" "0132" "011" "0213" "012" "011" "023"
#> Prog_341 Prog_348 Prog_354 Prog_360 Prog_366 Prog_372 Prog_378 LT-HSC_108 Prog_342
#> "012" "0212" "0412" "011" "014" "011" "03" "012" "011"
#> HSPC_385 HSPC_391 HSPC_397 HSPC_403 HSPC_409 HSPC_415 HSPC_421 HSPC_379 HSPC_386
#> "0211" "03" "0211" "042" "023" "023" "043" "0212" "042"
#> HSPC_392 HSPC_398 HSPC_404 HSPC_410 HSPC_416 HSPC_422 HSPC_380 HSPC_387 HSPC_393
#> "03" "03" "011" "012" "03" "03" "03" "0412" "0411"
#> HSPC_399 HSPC_405 HSPC_411 HSPC_417 HSPC_423 HSPC_381 HSPC_388 HSPC_394 HSPC_400
#> "03" "03" "012" "012" "012" "0211" "012" "0211" "0412"
#> HSPC_406 HSPC_412 HSPC_418 HSPC_424 HSPC_382 HSPC_389 HSPC_395 HSPC_401 HSPC_407
#> "042" "0131" "03" "0413" "012" "014" "043" "0211" "0131"
#> HSPC_413 HSPC_419 HSPC_425 HSPC_383 HSPC_390 HSPC_396 HSPC_402 HSPC_408 HSPC_414
#> "042" "0131" "0413" "022" "042" "03" "03" "011" "0211"
#> HSPC_420 HSPC_426 HSPC_384 Prog_385 Prog_391 Prog_397 Prog_403 Prog_409 Prog_415
#> "012" "042" "0211" "011" "0213" "011" "011" "011" "011"
#> Prog_421 Prog_379 Prog_386 Prog_392 Prog_398 Prog_404 Prog_410 Prog_416 Prog_422
#> "011" "011" "011" "012" "011" "011" "011" "011" "0413"
#> Prog_380 Prog_387 Prog_393 Prog_399 Prog_405 Prog_411 Prog_417 Prog_423 Prog_381
#> "011" "0131" "011" "012" "012" "042" "0411" "0412" "011"
#> Prog_388 Prog_394 Prog_400 Prog_406 Prog_412 Prog_418 Prog_424 Prog_382 Prog_389
#> "011" "03" "0211" "011" "012" "014" "011" "03" "0132"
#> Prog_395 Prog_401 Prog_407 Prog_413 Prog_419 Prog_425 Prog_383 Prog_390 Prog_396
#> "011" "0132" "03" "012" "011" "014" "011" "043" "014"
#> Prog_402 Prog_408 Prog_414 Prog_420 Prog_426 Prog_384 HSPC_433 HSPC_439 HSPC_445
#> "0412" "014" "0131" "012" "012" "0411" "0212" "0212" "0212"
#> HSPC_451 HSPC_457 HSPC_463 LT-HSC_109 HSPC_427 HSPC_434 HSPC_440 HSPC_446 HSPC_452
#> "023" "022" "03" "022" "023" "0213" "042" "022" "0211"
#> HSPC_458 HSPC_464 LT-HSC_110 HSPC_428 HSPC_435 HSPC_441 HSPC_447 HSPC_453 HSPC_459
#> "0211" "0211" "03" "0212" "03" "03" "03" "03" "03"
#> HSPC_465 LT-HSC_111 HSPC_429 HSPC_436 HSPC_442 HSPC_448 HSPC_454 HSPC_460 HSPC_466
#> "03" "022" "0211" "0132" "012" "03" "0132" "03" "042"
#> LT-HSC_112 HSPC_430 HSPC_437 HSPC_443 HSPC_449 HSPC_455 HSPC_461 HSPC_467 LT-HSC_113
#> "03" "03" "0211" "03" "03" "022" "042" "03" "03"
#> HSPC_431 HSPC_438 HSPC_444 HSPC_450 HSPC_456 HSPC_462 HSPC_468 LT-HSC_114 HSPC_432
#> "03" "0213" "022" "022" "012" "03" "03" "023" "022"
#> Prog_433 Prog_439 Prog_445 Prog_451 Prog_457 Prog_463 LT-HSC_115 Prog_427 Prog_434
#> "03" "03" "03" "0131" "014" "03" "012" "022" "011"
#> Prog_440 Prog_446 Prog_452 Prog_458 Prog_464 LT-HSC_116 Prog_428 Prog_435 Prog_441
#> "043" "03" "0212" "043" "03" "03" "012" "0411" "012"
#> Prog_447 Prog_453 Prog_459 Prog_465 LT-HSC_117 Prog_429 Prog_436 Prog_442 Prog_448
#> "012" "014" "03" "043" "03" "011" "012" "0211" "03"
#> Prog_454 Prog_460 Prog_466 LT-HSC_118 Prog_430 Prog_437 Prog_443 Prog_449 Prog_455
#> "0412" "042" "0411" "0211" "011" "0132" "0131" "011" "03"
#> Prog_461 Prog_467 LT-HSC_119 Prog_431 Prog_438 Prog_444 Prog_450 Prog_456 Prog_462
#> "022" "03" "0213" "03" "022" "011" "012" "012" "042"
#> Prog_468 LT-HSC_120 Prog_432 HSPC_475 HSPC_481 HSPC_487 HSPC_493 HSPC_499 HSPC_505
#> "0411" "0413" "043" "022" "023" "0212" "022" "022" "042"
#> LT-HSC_121 HSPC_469 HSPC_476 HSPC_482 HSPC_488 HSPC_494 HSPC_500 HSPC_506 LT-HSC_122
#> "0213" "023" "0211" "022" "022" "022" "022" "022" "042"
#> HSPC_470 HSPC_477 HSPC_483 HSPC_489 HSPC_495 HSPC_501 HSPC_507 LT-HSC_123 HSPC_471
#> "022" "012" "022" "042" "043" "023" "022" "022" "022"
#> HSPC_478 HSPC_484 HSPC_490 HSPC_496 HSPC_502 HSPC_508 LT-HSC_124 HSPC_472 HSPC_479
#> "022" "0211" "03" "03" "03" "0131" "03" "03" "03"
#> HSPC_485 HSPC_491 HSPC_497 HSPC_503 HSPC_509 LT-HSC_125 HSPC_473 HSPC_480 HSPC_486
#> "012" "0412" "022" "012" "042" "03" "03" "03" "042"
#> HSPC_492 HSPC_498 HSPC_504 HSPC_510 LT-HSC_126 HSPC_474 Prog_475 Prog_481 Prog_487
#> "03" "03" "022" "0412" "03" "03" "0131" "03" "0131"
#> Prog_493 Prog_499 Prog_505 LT-HSC_127 Prog_469 Prog_476 Prog_482 Prog_488 Prog_494
#> "012" "012" "0131" "0212" "042" "012" "012" "0131" "043"
#> Prog_500 Prog_506 LT-HSC_128 Prog_470 Prog_477 Prog_483 Prog_489 Prog_495 Prog_501
#> "0131" "012" "03" "012" "011" "043" "012" "03" "012"
#> Prog_507 LT-HSC_129 Prog_471 Prog_478 Prog_484 Prog_490 Prog_496 Prog_502 Prog_508
#> "0411" "0211" "012" "011" "012" "043" "03" "011" "011"
#> LT-HSC_130 Prog_472 Prog_479 Prog_485 Prog_491 Prog_497 Prog_503 Prog_509 LT-HSC_131
#> "0132" "043" "012" "0132" "0131" "0411" "043" "03" "03"
#> Prog_473 Prog_480 Prog_486 Prog_492 Prog_498 Prog_504 Prog_510 LT-HSC_132 Prog_474
#> "012" "023" "012" "03" "0213" "012" "042" "014" "03"
#> HSPC_517 HSPC_523 HSPC_529 HSPC_535 HSPC_541 HSPC_547 LT-HSC_133 HSPC_511 HSPC_518
#> "023" "03" "0211" "022" "022" "03" "0212" "023" "022"
#> HSPC_524 HSPC_530 HSPC_536 HSPC_542 HSPC_548 LT-HSC_134 HSPC_512 HSPC_519 HSPC_525
#> "022" "022" "0211" "0211" "022" "023" "03" "0211" "023"
#> HSPC_531 HSPC_537 HSPC_543 HSPC_549 LT-HSC_135 HSPC_513 HSPC_520 HSPC_526 HSPC_532
#> "022" "042" "042" "022" "022" "0212" "042" "03" "042"
#> HSPC_538 HSPC_544 HSPC_550 LT-HSC_136 HSPC_514 HSPC_521 HSPC_527 HSPC_533 HSPC_539
#> "03" "012" "042" "023" "03" "022" "012" "03" "022"
#> HSPC_545 HSPC_551 LT-HSC_137 HSPC_515 HSPC_522 HSPC_528 HSPC_534 HSPC_540 HSPC_546
#> "022" "042" "022" "03" "022" "0413" "03" "03" "022"
#> HSPC_552 LT-HSC_138 HSPC_516 Prog_517 Prog_523 Prog_529 Prog_535 Prog_541 Prog_547
#> "042" "022" "03" "03" "011" "0131" "011" "0131" "0132"
#> LT-HSC_139 Prog_511 Prog_518 Prog_524 Prog_530 Prog_536 Prog_542 Prog_548 LT-HSC_140
#> "03" "03" "0413" "042" "012" "011" "0413" "011" "022"
#> Prog_512 Prog_519 Prog_525 Prog_531 Prog_537 Prog_543 Prog_549 LT-HSC_141 Prog_513
#> "0411" "042" "043" "0131" "022" "014" "0413" "0211" "03"
#> Prog_520 Prog_526 Prog_532 Prog_538 Prog_544 Prog_550 LT-HSC_142 Prog_514 Prog_521
#> "0131" "023" "022" "0212" "023" "012" "012" "012" "012"
#> Prog_527 Prog_533 Prog_539 Prog_545 Prog_551 LT-HSC_143 Prog_515 Prog_522 Prog_528
#> "012" "022" "0411" "014" "012" "0132" "043" "022" "014"
#> Prog_534 Prog_540 Prog_546 Prog_552 LT-HSC_144 Prog_516 HSPC_559 HSPC_565 HSPC_571
#> "043" "023" "023" "0412" "042" "011" "022" "023" "03"
#> HSPC_577 HSPC_583 HSPC_589 LT-HSC_145 HSPC_553 HSPC_560 HSPC_566 HSPC_572 HSPC_578
#> "022" "0211" "022" "022" "0131" "022" "022" "023" "022"
#> HSPC_584 HSPC_590 LT-HSC_146 HSPC_554 HSPC_561 HSPC_567 HSPC_573 HSPC_579 HSPC_585
#> "022" "042" "03" "022" "0211" "03" "022" "03" "022"
#> HSPC_591 LT-HSC_147 HSPC_555 HSPC_562 HSPC_568 HSPC_574 HSPC_580 HSPC_586 HSPC_592
#> "023" "022" "022" "023" "022" "012" "03" "03" "03"
#> LT-HSC_148 HSPC_556 HSPC_563 HSPC_569 HSPC_575 HSPC_581 HSPC_587 HSPC_593 LT-HSC_149
#> "042" "03" "03" "0413" "03" "0211" "0211" "022" "022"
#> HSPC_557 HSPC_564 HSPC_570 HSPC_576 HSPC_582 HSPC_588 HSPC_594 LT-HSC_150 HSPC_558
#> "03" "0211" "0211" "022" "022" "0212" "022" "022" "0211"
#> Prog_559 Prog_565 Prog_571 Prog_577 Prog_583 Prog_589 LT-HSC_151 Prog_553 Prog_560
#> "012" "012" "012" "012" "023" "023" "03" "043" "012"
#> Prog_566 Prog_572 Prog_578 Prog_584 Prog_590 LT-HSC_152 Prog_554 Prog_561 Prog_567
#> "014" "03" "0413" "012" "012" "022" "03" "042" "012"
#> Prog_573 Prog_579 Prog_585 Prog_591 LT-HSC_153 Prog_555 Prog_562 Prog_568 Prog_574
#> "023" "012" "03" "023" "022" "03" "011" "03" "012"
#> Prog_580 Prog_586 Prog_592 LT-HSC_154 Prog_556 Prog_563 Prog_569 Prog_575 Prog_581
#> "03" "043" "011" "0211" "03" "0213" "0131" "011" "012"
#> Prog_587 Prog_593 LT-HSC_155 Prog_557 Prog_564 Prog_570 Prog_576 Prog_582 Prog_588
#> "0132" "012" "0211" "012" "03" "0411" "014" "012" "03"
#> Prog_594 LT-HSC_156 Prog_558 HSPC_601 HSPC_607 HSPC_613 HSPC_619 HSPC_625 HSPC_631
#> "03" "012" "03" "042" "023" "042" "0211" "022" "0412"
#> LT-HSC_157 HSPC_595 HSPC_602 HSPC_608 HSPC_614 HSPC_620 HSPC_626 HSPC_632 LT-HSC_158
#> "023" "03" "022" "022" "042" "022" "023" "0211" "022"
#> HSPC_596 HSPC_603 HSPC_609 HSPC_615 HSPC_621 HSPC_627 HSPC_633 LT-HSC_159 HSPC_597
#> "042" "03" "023" "023" "0211" "042" "023" "0411" "042"
#> HSPC_604 HSPC_610 HSPC_616 HSPC_622 HSPC_628 HSPC_634 LT-HSC_160 HSPC_598 HSPC_605
#> "022" "022" "0211" "0211" "042" "042" "023" "042" "0213"
#> HSPC_611 HSPC_617 HSPC_623 HSPC_629 HSPC_635 LT-HSC_161 HSPC_599 HSPC_606 HSPC_612
#> "0211" "03" "042" "042" "042" "023" "022" "03" "03"
#> HSPC_618 HSPC_624 HSPC_630 HSPC_636 LT-HSC_162 HSPC_600 Prog_601 Prog_607 Prog_613
#> "022" "03" "022" "03" "023" "023" "0211" "012" "03"
#> Prog_619 Prog_625 Prog_631 LT-HSC_163 Prog_595 Prog_602 Prog_608 Prog_614 Prog_620
#> "022" "0413" "03" "022" "022" "0132" "011" "0132" "042"
#> Prog_626 Prog_632 LT-HSC_164 Prog_596 Prog_603 Prog_609 Prog_615 Prog_621 Prog_627
#> "012" "012" "03" "03" "011" "012" "0411" "012" "03"
#> Prog_633 LT-HSC_165 Prog_597 Prog_604 Prog_610 Prog_616 Prog_622 Prog_628 Prog_634
#> "043" "022" "03" "03" "03" "011" "012" "012" "043"
#> LT-HSC_166 Prog_598 Prog_605 Prog_611 Prog_617 Prog_623 Prog_629 Prog_635 LT-HSC_167
#> "042" "012" "014" "03" "03" "0132" "012" "03" "022"
#> Prog_599 Prog_606 Prog_612 Prog_618 Prog_624 Prog_630 Prog_636 LT-HSC_168 Prog_600
#> "012" "03" "0131" "012" "012" "0131" "0213" "0131" "012"
#> HSPC_643 HSPC_649 HSPC_655 HSPC_661 HSPC_667 HSPC_673 LT-HSC_169 HSPC_637 HSPC_644
#> "042" "03" "0212" "042" "022" "022" "023" "03" "0132"
#> HSPC_650 HSPC_656 HSPC_662 HSPC_668 HSPC_674 LT-HSC_170 HSPC_638 HSPC_645 HSPC_651
#> "0211" "022" "022" "03" "03" "042" "0132" "03" "0411"
#> HSPC_657 HSPC_663 HSPC_669 HSPC_675 LT-HSC_171 HSPC_639 HSPC_646 HSPC_652 HSPC_658
#> "023" "0412" "022" "0212" "042" "03" "03" "042" "0412"
#> HSPC_664 HSPC_670 HSPC_676 LT-HSC_172 HSPC_640 HSPC_647 HSPC_653 HSPC_659 HSPC_665
#> "03" "023" "022" "022" "03" "022" "0211" "0211" "042"
#> HSPC_671 HSPC_677 LT-HSC_173 HSPC_641 HSPC_648 HSPC_654 HSPC_660 HSPC_666 HSPC_672
#> "03" "023" "022" "03" "022" "042" "043" "0413" "03"
#> HSPC_678 LT-HSC_174 HSPC_642 Prog_643 Prog_649 Prog_655 Prog_661 Prog_667 Prog_673
#> "022" "03" "0211" "0412" "011" "011" "0131" "043" "042"
#> LT-HSC_175 Prog_637 Prog_644 Prog_650 Prog_656 Prog_662 Prog_668 Prog_674 LT-HSC_176
#> "0211" "014" "03" "012" "03" "03" "023" "03" "022"
#> Prog_638 Prog_645 Prog_651 Prog_657 Prog_663 Prog_669 Prog_675 LT-HSC_177 Prog_639
#> "011" "043" "03" "011" "011" "023" "012" "022" "014"
#> Prog_646 Prog_652 Prog_658 Prog_664 Prog_670 Prog_676 LT-HSC_178 Prog_640 Prog_647
#> "012" "012" "012" "023" "012" "03" "0211" "011" "043"
#> Prog_653 Prog_659 Prog_665 Prog_671 Prog_677 LT-HSC_179 Prog_641 Prog_648 Prog_654
#> "043" "03" "03" "03" "011" "03" "023" "042" "0132"
#> Prog_660 Prog_666 Prog_672 Prog_678 LT-HSC_180 Prog_642 HSPC_685 HSPC_691 HSPC_697
#> "03" "03" "03" "0411" "043" "03" "0213" "0212" "0413"
#> HSPC_703 HSPC_709 HSPC_715 LT-HSC_181 HSPC_679 HSPC_686 HSPC_692 HSPC_698 HSPC_704
#> "022" "023" "0212" "0212" "03" "0211" "023" "022" "022"
#> HSPC_710 HSPC_716 LT-HSC_182 HSPC_680 HSPC_687 HSPC_693 HSPC_699 HSPC_705 HSPC_711
#> "0211" "022" "0213" "022" "023" "023" "022" "012" "0211"
#> HSPC_717 LT-HSC_183 HSPC_681 HSPC_688 HSPC_694 HSPC_700 HSPC_706 HSPC_712 HSPC_718
#> "0412" "03" "042" "0211" "0211" "0413" "03" "0211" "0211"
#> LT-HSC_184 HSPC_682 HSPC_689 HSPC_695 HSPC_701 HSPC_707 HSPC_713 HSPC_719 LT-HSC_185
#> "03" "012" "022" "0132" "042" "042" "0212" "022" "023"
#> HSPC_683 HSPC_690 HSPC_696 HSPC_702 HSPC_708 HSPC_714 HSPC_720 LT-HSC_186 HSPC_684
#> "0412" "022" "043" "022" "03" "022" "012" "0211" "023"
#> Prog_685 Prog_691 Prog_697 Prog_703 Prog_709 Prog_715 LT-HSC_187 Prog_679 Prog_686
#> "012" "0213" "011" "043" "014" "012" "03" "012" "0413"
#> Prog_692 Prog_698 Prog_704 Prog_710 Prog_716 LT-HSC_188 Prog_680 Prog_687 Prog_693
#> "03" "0131" "03" "03" "03" "03" "012" "012" "012"
#> Prog_699 Prog_705 Prog_711 Prog_717 LT-HSC_189 Prog_681 Prog_688 Prog_694 Prog_700
#> "012" "012" "03" "012" "0211" "0131" "011" "03" "011"
#> Prog_706 Prog_712 Prog_718 LT-HSC_190 Prog_682 Prog_689 Prog_695 Prog_701 Prog_707
#> "0131" "0132" "012" "023" "0132" "03" "011" "011" "03"
#> Prog_713 Prog_719 LT-HSC_191 Prog_683 Prog_690 Prog_696 Prog_702 Prog_708 Prog_714
#> "0131" "011" "03" "023" "03" "0411" "014" "014" "014"
#> Prog_720 LT-HSC_192 Prog_684 HSPC_727 HSPC_733 HSPC_739 HSPC_745 HSPC_751 HSPC_757
#> "014" "012" "03" "022" "022" "023" "023" "022" "022"
#> LT-HSC_193 HSPC_721 HSPC_728 HSPC_734 HSPC_740 HSPC_746 HSPC_752 HSPC_758 LT-HSC_194
#> "022" "023" "0213" "012" "022" "023" "023" "03" "022"
#> HSPC_722 HSPC_729 HSPC_735 HSPC_741 HSPC_747 HSPC_753 HSPC_759 LT-HSC_195 HSPC_723
#> "03" "03" "042" "0211" "022" "03" "03" "03" "03"
#> HSPC_730 HSPC_736 HSPC_742 HSPC_748 HSPC_754 HSPC_760 LT-HSC_196 HSPC_724 HSPC_731
#> "03" "03" "03" "022" "0213" "042" "0211" "03" "0412"
#> HSPC_737 HSPC_743 HSPC_749 HSPC_755 HSPC_761 LT-HSC_197 HSPC_725 HSPC_732 HSPC_738
#> "012" "03" "022" "03" "03" "022" "023" "03" "022"
#> HSPC_744 HSPC_750 HSPC_756 HSPC_762 LT-HSC_198 HSPC_726 Prog_727 Prog_733 Prog_739
#> "042" "03" "022" "042" "022" "0213" "012" "03" "0412"
#> Prog_745 Prog_751 Prog_757 LT-HSC_199 Prog_721 Prog_728 Prog_734 Prog_740 Prog_746
#> "03" "03" "0412" "0211" "014" "03" "014" "03" "0411"
#> Prog_752 Prog_758 LT-HSC_200 Prog_722 Prog_729 Prog_735 Prog_741 Prog_747 Prog_753
#> "03" "03" "022" "014" "023" "012" "0213" "03" "0131"
#> Prog_759 LT-HSC_201 Prog_723 Prog_730 Prog_736 Prog_742 Prog_748 Prog_754 Prog_760
#> "012" "022" "011" "011" "0131" "0213" "0413" "0131" "012"
#> LT-HSC_202 Prog_724 Prog_731 Prog_737 Prog_743 Prog_749 Prog_755 Prog_761 LT-HSC_203
#> "03" "03" "011" "03" "012" "043" "0213" "0412" "0213"
#> Prog_725 Prog_732 Prog_738 Prog_744 Prog_750 Prog_756 Prog_762 LT-HSC_204 Prog_726
#> "03" "043" "03" "03" "0413" "043" "03" "03" "03"
#> HSPC_769 HSPC_775 HSPC_781 HSPC_787 HSPC_793 HSPC_799 LT-HSC_205 HSPC_763 HSPC_770
#> "023" "023" "022" "023" "0212" "023" "023" "0212" "042"
#> HSPC_776 HSPC_782 HSPC_788 HSPC_794 HSPC_800 LT-HSC_206 HSPC_764 HSPC_771 HSPC_777
#> "023" "022" "023" "03" "0413" "022" "022" "03" "03"
#> HSPC_783 HSPC_789 HSPC_795 HSPC_801 LT-HSC_207 HSPC_765 HSPC_772 HSPC_778 HSPC_784
#> "022" "042" "03" "03" "042" "023" "042" "03" "03"
#> HSPC_790 HSPC_796 HSPC_802 LT-HSC_208 HSPC_766 HSPC_773 HSPC_779 HSPC_785 HSPC_791
#> "042" "012" "022" "022" "012" "03" "042" "03" "043"
#> HSPC_797 HSPC_803 LT-HSC_209 HSPC_767 HSPC_774 HSPC_780 HSPC_786 HSPC_792 HSPC_798
#> "03" "022" "0211" "012" "03" "03" "03" "0213" "022"
#> HSPC_804 LT-HSC_210 HSPC_768 Prog_769 Prog_775 Prog_781 Prog_787 Prog_793 Prog_799
#> "022" "022" "023" "012" "03" "012" "043" "0132" "03"
#> LT-HSC_211 Prog_763 Prog_770 Prog_776 Prog_782 Prog_788 Prog_794 Prog_800 LT-HSC_212
#> "042" "012" "014" "011" "012" "011" "012" "012" "03"
#> Prog_764 Prog_771 Prog_777 Prog_783 Prog_789 Prog_795 Prog_801 LT-HSC_213 Prog_765
#> "012" "014" "012" "014" "012" "012" "0132" "022" "0131"
#> Prog_772 Prog_778 Prog_784 Prog_790 Prog_796 Prog_802 LT-HSC_214 Prog_766 Prog_773
#> "012" "023" "03" "011" "0412" "014" "03" "0212" "0212"
#> Prog_779 Prog_785 Prog_791 Prog_797 Prog_803 LT-HSC_215 Prog_767 Prog_774 Prog_780
#> "0131" "03" "012" "03" "043" "03" "011" "012" "011"
#> Prog_786 Prog_792 Prog_798 Prog_804 LT-HSC_216 Prog_768 HSPC_811 HSPC_817 HSPC_823
#> "011" "0131" "0131" "012" "0411" "012" "0212" "0212" "0212"
#> HSPC_829 HSPC_835 HSPC_841 HSPC_847 HSPC_805 HSPC_812 HSPC_818 HSPC_824 HSPC_830
#> "0213" "03" "043" "023" "0212" "012" "03" "03" "0212"
#> HSPC_836 HSPC_842 HSPC_848 HSPC_806 HSPC_813 HSPC_819 HSPC_825 HSPC_831 HSPC_837
#> "023" "023" "022" "023" "012" "042" "03" "03" "0412"
#> HSPC_843 HSPC_849 HSPC_807 HSPC_814 HSPC_820 HSPC_826 HSPC_832 HSPC_838 HSPC_844
#> "03" "022" "012" "0413" "012" "03" "03" "03" "022"
#> HSPC_850 HSPC_808 HSPC_815 HSPC_821 HSPC_827 HSPC_833 HSPC_839 HSPC_845 HSPC_851
#> "0211" "012" "03" "042" "022" "012" "0413" "03" "023"
#> HSPC_809 HSPC_816 HSPC_822 HSPC_828 HSPC_834 HSPC_840 HSPC_846 HSPC_852 HSPC_810
#> "022" "042" "03" "03" "03" "022" "042" "022" "022"
#> Prog_811 Prog_817 Prog_823 Prog_829 Prog_835 Prog_841 Prog_847 Prog_805 Prog_812
#> "014" "0132" "03" "012" "014" "0411" "012" "042" "023"
#> Prog_818 Prog_824 Prog_830 Prog_836 Prog_842 Prog_848 Prog_806 Prog_813 Prog_819
#> "014" "012" "011" "0131" "014" "022" "03" "011" "011"
#> Prog_825 Prog_831 Prog_837 Prog_843 Prog_849 Prog_807 Prog_814 Prog_820 Prog_826
#> "011" "014" "014" "0131" "042" "014" "011" "0132" "011"
#> Prog_832 Prog_838 Prog_844 Prog_850 Prog_808 Prog_815 Prog_821 Prog_827 Prog_833
#> "012" "011" "014" "014" "012" "014" "011" "03" "012"
#> Prog_839 Prog_845 Prog_851 Prog_809 Prog_816 Prog_822 Prog_828 Prog_834 Prog_840
#> "0131" "0131" "03" "0132" "012" "011" "011" "012" "012"
#> Prog_846 Prog_852 Prog_810
#> "012" "0411" "0131"
get_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 2897))
#> HSPC_007 HSPC_013 HSPC_019 HSPC_025 HSPC_031 HSPC_037 LT-HSC_001 HSPC_001 HSPC_008
#> "0213" "023" "0211" "042" "03" "042" "023" "012" "042"
#> HSPC_014 HSPC_020 HSPC_026 HSPC_032 HSPC_038 LT-HSC_002 HSPC_002 HSPC_009 HSPC_015
#> "022" "042" "0412" "0211" "022" "042" "022" "022" "023"
#> HSPC_021 HSPC_027 HSPC_033 HSPC_039 LT-HSC_003 HSPC_003 HSPC_010 HSPC_016 HSPC_022
#> "022" "03" "03" "0211" "023" "012" "0213" "012" "0412"
#> HSPC_028 HSPC_034 HSPC_040 LT-HSC_004 HSPC_004 HSPC_011 HSPC_017 HSPC_023 HSPC_029
#> "03" "012" "03" "022" "03" "042" "022" "042" "0211"
#> HSPC_035 HSPC_041 LT-HSC_005 HSPC_005 HSPC_012 HSPC_018 HSPC_024 HSPC_030 HSPC_036
#> "022" "042" "0211" "0211" "042" "042" "022" "03" "012"
#> HSPC_042 LT-HSC_006 HSPC_006 Prog_007 Prog_013 Prog_019 Prog_025 Prog_031 Prog_037
#> "03" "022" "0412" "012" "012" "013" "0411" "03" "03"
#> LT-HSC_007 Prog_001 Prog_008 Prog_014 Prog_020 Prog_026 Prog_032 Prog_038 LT-HSC_008
#> "042" "043" "011" "011" "014" "03" "014" "014" "03"
#> Prog_002 Prog_009 Prog_015 Prog_021 Prog_027 Prog_033 Prog_039 LT-HSC_009 Prog_003
#> "012" "011" "012" "014" "012" "011" "011" "022" "012"
#> Prog_010 Prog_016 Prog_022 Prog_028 Prog_034 Prog_040 LT-HSC_010 Prog_004 Prog_011
#> "0412" "0411" "0411" "011" "0211" "042" "0412" "03" "014"
#> Prog_017 Prog_023 Prog_029 Prog_035 Prog_041 LT-HSC_011 Prog_005 Prog_012 Prog_018
#> "012" "012" "014" "011" "0213" "0213" "0213" "022" "022"
#> Prog_024 Prog_030 Prog_036 Prog_042 LT-HSC_012 Prog_006 HSPC_049 HSPC_055 HSPC_061
#> "014" "0411" "0412" "0411" "0411" "011" "03" "042" "042"
#> HSPC_067 HSPC_073 HSPC_079 LT-HSC_013 HSPC_043 HSPC_050 HSPC_056 HSPC_062 HSPC_068
#> "042" "022" "0412" "022" "042" "043" "022" "0413" "022"
#> HSPC_074 HSPC_080 LT-HSC_014 HSPC_044 HSPC_051 HSPC_057 HSPC_063 HSPC_069 HSPC_075
#> "022" "03" "022" "043" "03" "022" "0412" "03" "022"
#> HSPC_081 LT-HSC_015 HSPC_045 HSPC_052 HSPC_058 HSPC_064 HSPC_070 HSPC_076 HSPC_082
#> "03" "022" "042" "043" "03" "0413" "03" "03" "042"
#> LT-HSC_016 HSPC_046 HSPC_053 HSPC_059 HSPC_065 HSPC_071 HSPC_077 HSPC_083 LT-HSC_017
#> "022" "03" "012" "0211" "03" "0413" "012" "022" "022"
#> HSPC_047 HSPC_054 HSPC_060 HSPC_066 HSPC_072 HSPC_078 HSPC_084 LT-HSC_018 HSPC_048
#> "023" "03" "03" "03" "0413" "043" "042" "022" "03"
#> Prog_049 Prog_055 Prog_061 Prog_067 Prog_073 Prog_079 LT-HSC_019 Prog_043 Prog_050
#> "011" "012" "011" "014" "03" "011" "0211" "013" "012"
#> Prog_056 Prog_062 Prog_068 Prog_074 Prog_080 LT-HSC_020 Prog_044 Prog_051 Prog_057
#> "012" "042" "03" "0411" "043" "03" "03" "014" "013"
#> Prog_063 Prog_069 Prog_075 Prog_081 LT-HSC_021 Prog_045 Prog_052 Prog_058 Prog_064
#> "043" "012" "012" "011" "0413" "013" "043" "014" "014"
#> Prog_070 Prog_076 Prog_082 LT-HSC_022 Prog_046 Prog_053 Prog_059 Prog_065 Prog_071
#> "0412" "014" "011" "022" "011" "011" "012" "013" "012"
#> Prog_077 Prog_083 LT-HSC_023 Prog_047 Prog_054 Prog_060 Prog_066 Prog_072 Prog_078
#> "012" "012" "022" "012" "0411" "0213" "014" "03" "014"
#> Prog_084 LT-HSC_024 Prog_048 HSPC_091 HSPC_097 HSPC_103 HSPC_109 HSPC_115 HSPC_121
#> "011" "03" "03" "0212" "023" "022" "043" "022" "023"
#> LT-HSC_025 HSPC_085 HSPC_092 HSPC_098 HSPC_104 HSPC_110 HSPC_116 HSPC_122 LT-HSC_026
#> "0212" "042" "0212" "043" "023" "043" "0211" "03" "022"
#> HSPC_086 HSPC_093 HSPC_099 HSPC_105 HSPC_111 HSPC_117 HSPC_123 LT-HSC_027 HSPC_087
#> "0211" "0211" "042" "022" "022" "042" "022" "023" "022"
#> HSPC_094 HSPC_100 HSPC_106 HSPC_112 HSPC_118 HSPC_124 LT-HSC_028 HSPC_088 HSPC_095
#> "012" "03" "022" "0211" "03" "0211" "03" "03" "022"
#> HSPC_101 HSPC_107 HSPC_113 HSPC_119 HSPC_125 LT-HSC_029 HSPC_089 HSPC_096 HSPC_102
#> "012" "042" "023" "023" "03" "0212" "03" "043" "012"
#> HSPC_108 HSPC_114 HSPC_120 HSPC_126 LT-HSC_030 HSPC_090 Prog_091 Prog_097 Prog_103
#> "03" "03" "03" "03" "0212" "012" "011" "012" "012"
#> Prog_109 Prog_115 Prog_121 LT-HSC_031 Prog_085 Prog_092 Prog_098 Prog_104 Prog_110
#> "0412" "014" "0213" "03" "012" "03" "011" "0211" "011"
#> Prog_116 Prog_122 LT-HSC_032 Prog_086 Prog_093 Prog_099 Prog_105 Prog_111 Prog_117
#> "012" "03" "011" "0212" "012" "012" "012" "014" "013"
#> Prog_123 LT-HSC_033 Prog_087 Prog_094 Prog_100 Prog_106 Prog_112 Prog_118 Prog_124
#> "012" "03" "012" "014" "011" "03" "011" "0412" "03"
#> LT-HSC_034 Prog_088 Prog_095 Prog_101 Prog_107 Prog_113 Prog_119 Prog_125 LT-HSC_035
#> "03" "043" "011" "013" "011" "012" "011" "03" "0212"
#> Prog_089 Prog_096 Prog_102 Prog_108 Prog_114 Prog_120 Prog_126 LT-HSC_036 Prog_090
#> "014" "03" "03" "0411" "0413" "023" "014" "03" "011"
#> HSPC_133 HSPC_139 HSPC_145 HSPC_151 HSPC_157 HSPC_163 LT-HSC_037 HSPC_127 HSPC_134
#> "022" "022" "023" "042" "043" "023" "023" "0412" "023"
#> HSPC_140 HSPC_146 HSPC_152 HSPC_158 HSPC_164 LT-HSC_038 HSPC_128 HSPC_135 HSPC_141
#> "023" "0412" "022" "042" "022" "023" "023" "03" "022"
#> HSPC_147 HSPC_153 HSPC_159 HSPC_165 LT-HSC_039 HSPC_129 HSPC_136 HSPC_142 HSPC_148
#> "023" "022" "042" "043" "022" "0211" "042" "042" "043"
#> HSPC_154 HSPC_160 HSPC_166 LT-HSC_040 HSPC_130 HSPC_137 HSPC_143 HSPC_149 HSPC_155
#> "043" "0211" "042" "022" "042" "0211" "022" "022" "023"
#> HSPC_161 HSPC_167 LT-HSC_041 HSPC_131 HSPC_138 HSPC_144 HSPC_150 HSPC_156 HSPC_162
#> "042" "023" "022" "022" "012" "03" "0211" "012" "03"
#> HSPC_168 LT-HSC_042 HSPC_132 Prog_133 Prog_139 Prog_145 Prog_151 Prog_157 Prog_163
#> "0413" "022" "013" "012" "011" "012" "03" "012" "011"
#> LT-HSC_043 Prog_127 Prog_134 Prog_140 Prog_146 Prog_152 Prog_158 Prog_164 LT-HSC_044
#> "013" "03" "043" "011" "011" "043" "011" "0213" "043"
#> Prog_128 Prog_135 Prog_141 Prog_147 Prog_153 Prog_159 Prog_165 LT-HSC_045 Prog_129
#> "012" "03" "013" "0211" "012" "0412" "043" "0412" "013"
#> Prog_136 Prog_142 Prog_148 Prog_154 Prog_160 Prog_166 LT-HSC_046 Prog_130 Prog_137
#> "013" "03" "023" "03" "022" "014" "03" "013" "012"
#> Prog_143 Prog_149 Prog_155 Prog_161 Prog_167 LT-HSC_047 Prog_131 Prog_138 Prog_144
#> "013" "0413" "012" "03" "012" "0213" "03" "0211" "043"
#> Prog_150 Prog_156 Prog_162 Prog_168 LT-HSC_048 Prog_132 HSPC_175 HSPC_181 HSPC_187
#> "013" "0212" "0412" "013" "023" "013" "042" "022" "022"
#> HSPC_193 HSPC_199 HSPC_205 LT-HSC_049 HSPC_169 HSPC_176 HSPC_182 HSPC_188 HSPC_194
#> "03" "03" "022" "022" "042" "022" "023" "0211" "0211"
#> HSPC_200 HSPC_206 LT-HSC_050 HSPC_170 HSPC_177 HSPC_183 HSPC_189 HSPC_195 HSPC_201
#> "022" "012" "022" "023" "022" "03" "03" "012" "0211"
#> HSPC_207 LT-HSC_051 HSPC_171 HSPC_178 HSPC_184 HSPC_190 HSPC_196 HSPC_202 HSPC_208
#> "03" "022" "022" "03" "0212" "0413" "042" "03" "022"
#> LT-HSC_052 HSPC_172 HSPC_179 HSPC_185 HSPC_191 HSPC_197 HSPC_203 HSPC_209 LT-HSC_053
#> "012" "012" "012" "023" "022" "0211" "042" "0211" "0211"
#> HSPC_173 HSPC_180 HSPC_186 HSPC_192 HSPC_198 HSPC_204 HSPC_210 LT-HSC_054 HSPC_174
#> "023" "043" "03" "022" "03" "0412" "043" "022" "03"
#> Prog_175 Prog_181 Prog_187 Prog_193 Prog_199 Prog_205 LT-HSC_055 Prog_169 Prog_176
#> "0411" "0211" "03" "042" "03" "0413" "013" "0211" "012"
#> Prog_182 Prog_188 Prog_194 Prog_200 Prog_206 LT-HSC_056 Prog_170 Prog_177 Prog_183
#> "043" "014" "023" "043" "012" "013" "011" "042" "013"
#> Prog_189 Prog_195 Prog_201 Prog_207 LT-HSC_057 Prog_171 Prog_178 Prog_184 Prog_190
#> "012" "042" "0412" "014" "03" "042" "011" "013" "012"
#> Prog_196 Prog_202 Prog_208 LT-HSC_058 Prog_172 Prog_179 Prog_185 Prog_191 Prog_197
#> "011" "0213" "03" "03" "014" "013" "011" "03" "013"
#> Prog_203 Prog_209 LT-HSC_059 Prog_173 Prog_180 Prog_186 Prog_192 Prog_198 Prog_204
#> "013" "013" "0212" "043" "03" "012" "012" "0211" "023"
#> Prog_210 LT-HSC_060 Prog_174 HSPC_217 HSPC_223 HSPC_229 HSPC_235 HSPC_241 HSPC_247
#> "03" "013" "0213" "0212" "022" "023" "022" "0211" "023"
#> LT-HSC_061 HSPC_211 HSPC_218 HSPC_224 HSPC_230 HSPC_236 HSPC_242 HSPC_248 LT-HSC_062
#> "0212" "042" "022" "022" "042" "043" "023" "022" "023"
#> HSPC_212 HSPC_219 HSPC_225 HSPC_231 HSPC_237 HSPC_243 HSPC_249 LT-HSC_063 HSPC_213
#> "023" "042" "022" "023" "022" "0412" "022" "03" "0413"
#> HSPC_220 HSPC_226 HSPC_232 HSPC_238 HSPC_244 HSPC_250 LT-HSC_064 HSPC_214 HSPC_221
#> "022" "0211" "023" "0212" "03" "0413" "011" "012" "03"
#> HSPC_227 HSPC_233 HSPC_239 HSPC_245 HSPC_251 LT-HSC_065 HSPC_215 HSPC_222 HSPC_228
#> "022" "042" "022" "022" "0413" "03" "0412" "042" "023"
#> HSPC_234 HSPC_240 HSPC_246 HSPC_252 LT-HSC_066 HSPC_216 Prog_217 Prog_223 Prog_229
#> "0211" "03" "022" "0213" "03" "012" "011" "042" "011"
#> Prog_235 Prog_241 Prog_247 LT-HSC_067 Prog_211 Prog_218 Prog_224 Prog_230 Prog_236
#> "023" "022" "03" "0213" "011" "012" "013" "0413" "012"
#> Prog_242 Prog_248 LT-HSC_068 Prog_212 Prog_219 Prog_225 Prog_231 Prog_237 Prog_243
#> "014" "043" "012" "014" "0213" "03" "013" "042" "013"
#> Prog_249 LT-HSC_069 Prog_213 Prog_220 Prog_226 Prog_232 Prog_238 Prog_244 Prog_250
#> "011" "03" "043" "0213" "03" "03" "012" "03" "014"
#> LT-HSC_070 Prog_214 Prog_221 Prog_227 Prog_233 Prog_239 Prog_245 Prog_251 LT-HSC_071
#> "043" "0413" "011" "013" "012" "011" "012" "0212" "03"
#> Prog_215 Prog_222 Prog_228 Prog_234 Prog_240 Prog_246 Prog_252 LT-HSC_072 Prog_216
#> "011" "03" "013" "012" "012" "03" "03" "012" "011"
#> HSPC_259 HSPC_265 HSPC_271 HSPC_277 HSPC_283 HSPC_289 LT-HSC_073 HSPC_253 HSPC_260
#> "023" "022" "0412" "023" "022" "022" "023" "0413" "0211"
#> HSPC_266 HSPC_272 HSPC_278 HSPC_284 HSPC_290 LT-HSC_074 HSPC_254 HSPC_261 HSPC_267
#> "022" "0211" "042" "0211" "0413" "022" "022" "013" "03"
#> HSPC_273 HSPC_279 HSPC_285 HSPC_291 LT-HSC_075 HSPC_255 HSPC_262 HSPC_268 HSPC_274
#> "0211" "043" "012" "03" "03" "03" "0212" "012" "022"
#> HSPC_280 HSPC_286 HSPC_292 LT-HSC_076 HSPC_256 HSPC_263 HSPC_269 HSPC_275 HSPC_281
#> "0412" "042" "0412" "042" "011" "0412" "013" "013" "023"
#> HSPC_287 HSPC_293 LT-HSC_077 HSPC_257 HSPC_264 HSPC_270 HSPC_276 HSPC_282 HSPC_288
#> "0413" "0412" "023" "0413" "022" "03" "03" "012" "012"
#> HSPC_294 LT-HSC_078 HSPC_258 Prog_259 Prog_265 Prog_271 Prog_277 Prog_283 Prog_289
#> "0413" "022" "012" "03" "011" "03" "03" "042" "0412"
#> LT-HSC_079 Prog_253 Prog_260 Prog_266 Prog_272 Prog_278 Prog_284 Prog_290 LT-HSC_080
#> "0211" "014" "012" "012" "012" "011" "014" "011" "03"
#> Prog_254 Prog_261 Prog_267 Prog_273 Prog_279 Prog_285 Prog_291 LT-HSC_081 Prog_255
#> "011" "014" "013" "013" "011" "014" "0411" "012" "012"
#> Prog_262 Prog_268 Prog_274 Prog_280 Prog_286 Prog_292 LT-HSC_082 Prog_256 Prog_263
#> "012" "012" "014" "03" "011" "012" "03" "042" "013"
#> Prog_269 Prog_275 Prog_281 Prog_287 Prog_293 LT-HSC_083 Prog_257 Prog_264 Prog_270
#> "011" "012" "014" "013" "03" "0212" "0213" "023" "013"
#> Prog_276 Prog_282 Prog_288 Prog_294 LT-HSC_084 Prog_258 HSPC_301 HSPC_307 HSPC_313
#> "012" "011" "011" "012" "03" "013" "023" "022" "042"
#> HSPC_319 HSPC_325 HSPC_331 LT-HSC_085 HSPC_295 HSPC_302 HSPC_308 HSPC_314 HSPC_320
#> "0212" "022" "022" "022" "0413" "023" "043" "042" "043"
#> HSPC_326 HSPC_332 LT-HSC_086 HSPC_296 HSPC_303 HSPC_309 HSPC_315 HSPC_321 HSPC_327
#> "022" "012" "042" "022" "012" "022" "022" "042" "012"
#> HSPC_333 LT-HSC_087 HSPC_297 HSPC_304 HSPC_310 HSPC_316 HSPC_322 HSPC_328 HSPC_334
#> "012" "0212" "022" "03" "022" "023" "03" "042" "022"
#> LT-HSC_088 HSPC_298 HSPC_305 HSPC_311 HSPC_317 HSPC_323 HSPC_329 HSPC_335 LT-HSC_089
#> "043" "03" "0412" "0212" "023" "03" "042" "022" "022"
#> HSPC_299 HSPC_306 HSPC_312 HSPC_318 HSPC_324 HSPC_330 HSPC_336 LT-HSC_090 HSPC_300
#> "03" "03" "0413" "022" "03" "03" "022" "03" "012"
#> Prog_301 Prog_307 Prog_313 Prog_319 Prog_325 Prog_331 LT-HSC_091 Prog_295 Prog_302
#> "0411" "0412" "0413" "013" "012" "012" "011" "0412" "0212"
#> Prog_308 Prog_314 Prog_320 Prog_326 Prog_332 LT-HSC_092 Prog_296 Prog_303 Prog_309
#> "012" "03" "012" "011" "012" "0212" "012" "022" "022"
#> Prog_315 Prog_321 Prog_327 Prog_333 LT-HSC_093 Prog_297 Prog_304 Prog_310 Prog_316
#> "0411" "0411" "012" "043" "042" "043" "012" "0412" "0411"
#> Prog_322 Prog_328 Prog_334 LT-HSC_094 Prog_298 Prog_305 Prog_311 Prog_317 Prog_323
#> "043" "0411" "014" "042" "014" "0413" "043" "0212" "0411"
#> Prog_329 Prog_335 LT-HSC_095 Prog_299 Prog_306 Prog_312 Prog_318 Prog_324 Prog_330
#> "0411" "0413" "011" "011" "022" "011" "011" "011" "013"
#> Prog_336 LT-HSC_096 Prog_300 HSPC_343 HSPC_349 HSPC_355 HSPC_361 HSPC_367 HSPC_373
#> "013" "012" "013" "013" "03" "0213" "023" "022" "023"
#> LT-HSC_097 HSPC_337 HSPC_344 HSPC_350 HSPC_356 HSPC_362 HSPC_368 HSPC_374 LT-HSC_098
#> "0212" "022" "0412" "022" "043" "0411" "042" "03" "011"
#> HSPC_338 HSPC_345 HSPC_351 HSPC_357 HSPC_363 HSPC_369 HSPC_375 LT-HSC_099 HSPC_339
#> "011" "043" "043" "0211" "022" "0211" "0211" "023" "03"
#> HSPC_346 HSPC_352 HSPC_358 HSPC_364 HSPC_370 HSPC_376 LT-HSC_100 HSPC_340 HSPC_347
#> "012" "0412" "042" "042" "013" "042" "011" "0213" "0211"
#> HSPC_353 HSPC_359 HSPC_365 HSPC_371 HSPC_377 LT-HSC_101 HSPC_341 HSPC_348 HSPC_354
#> "012" "03" "023" "012" "0413" "0411" "012" "03" "022"
#> HSPC_360 HSPC_366 HSPC_372 HSPC_378 LT-HSC_102 HSPC_342 Prog_343 Prog_349 Prog_355
#> "042" "0213" "042" "0212" "011" "013" "013" "0411" "0413"
#> Prog_361 Prog_367 Prog_373 LT-HSC_103 Prog_337 Prog_344 Prog_350 Prog_356 Prog_362
#> "014" "013" "011" "013" "011" "0211" "014" "011" "0412"
#> Prog_368 Prog_374 LT-HSC_104 Prog_338 Prog_345 Prog_351 Prog_357 Prog_363 Prog_369
#> "014" "014" "0212" "012" "0411" "014" "011" "014" "0411"
#> Prog_375 LT-HSC_105 Prog_339 Prog_346 Prog_352 Prog_358 Prog_364 Prog_370 Prog_376
#> "011" "0411" "011" "014" "011" "03" "011" "0411" "011"
#> LT-HSC_106 Prog_340 Prog_347 Prog_353 Prog_359 Prog_365 Prog_371 Prog_377 LT-HSC_107
#> "0412" "014" "0213" "013" "011" "0213" "012" "011" "023"
#> Prog_341 Prog_348 Prog_354 Prog_360 Prog_366 Prog_372 Prog_378 LT-HSC_108 Prog_342
#> "012" "0212" "0412" "011" "014" "011" "03" "012" "011"
#> HSPC_385 HSPC_391 HSPC_397 HSPC_403 HSPC_409 HSPC_415 HSPC_421 HSPC_379 HSPC_386
#> "0211" "03" "0211" "042" "023" "023" "043" "0212" "042"
#> HSPC_392 HSPC_398 HSPC_404 HSPC_410 HSPC_416 HSPC_422 HSPC_380 HSPC_387 HSPC_393
#> "03" "03" "011" "012" "03" "03" "03" "0412" "0411"
#> HSPC_399 HSPC_405 HSPC_411 HSPC_417 HSPC_423 HSPC_381 HSPC_388 HSPC_394 HSPC_400
#> "03" "03" "012" "012" "012" "0211" "012" "0211" "0412"
#> HSPC_406 HSPC_412 HSPC_418 HSPC_424 HSPC_382 HSPC_389 HSPC_395 HSPC_401 HSPC_407
#> "042" "013" "03" "0413" "012" "014" "043" "0211" "013"
#> HSPC_413 HSPC_419 HSPC_425 HSPC_383 HSPC_390 HSPC_396 HSPC_402 HSPC_408 HSPC_414
#> "042" "013" "0413" "022" "042" "03" "03" "011" "0211"
#> HSPC_420 HSPC_426 HSPC_384 Prog_385 Prog_391 Prog_397 Prog_403 Prog_409 Prog_415
#> "012" "042" "0211" "011" "0213" "011" "011" "011" "011"
#> Prog_421 Prog_379 Prog_386 Prog_392 Prog_398 Prog_404 Prog_410 Prog_416 Prog_422
#> "011" "011" "011" "012" "011" "011" "011" "011" "0413"
#> Prog_380 Prog_387 Prog_393 Prog_399 Prog_405 Prog_411 Prog_417 Prog_423 Prog_381
#> "011" "013" "011" "012" "012" "042" "0411" "0412" "011"
#> Prog_388 Prog_394 Prog_400 Prog_406 Prog_412 Prog_418 Prog_424 Prog_382 Prog_389
#> "011" "03" "0211" "011" "012" "014" "011" "03" "013"
#> Prog_395 Prog_401 Prog_407 Prog_413 Prog_419 Prog_425 Prog_383 Prog_390 Prog_396
#> "011" "013" "03" "012" "011" "014" "011" "043" "014"
#> Prog_402 Prog_408 Prog_414 Prog_420 Prog_426 Prog_384 HSPC_433 HSPC_439 HSPC_445
#> "0412" "014" "013" "012" "012" "0411" "0212" "0212" "0212"
#> HSPC_451 HSPC_457 HSPC_463 LT-HSC_109 HSPC_427 HSPC_434 HSPC_440 HSPC_446 HSPC_452
#> "023" "022" "03" "022" "023" "0213" "042" "022" "0211"
#> HSPC_458 HSPC_464 LT-HSC_110 HSPC_428 HSPC_435 HSPC_441 HSPC_447 HSPC_453 HSPC_459
#> "0211" "0211" "03" "0212" "03" "03" "03" "03" "03"
#> HSPC_465 LT-HSC_111 HSPC_429 HSPC_436 HSPC_442 HSPC_448 HSPC_454 HSPC_460 HSPC_466
#> "03" "022" "0211" "013" "012" "03" "013" "03" "042"
#> LT-HSC_112 HSPC_430 HSPC_437 HSPC_443 HSPC_449 HSPC_455 HSPC_461 HSPC_467 LT-HSC_113
#> "03" "03" "0211" "03" "03" "022" "042" "03" "03"
#> HSPC_431 HSPC_438 HSPC_444 HSPC_450 HSPC_456 HSPC_462 HSPC_468 LT-HSC_114 HSPC_432
#> "03" "0213" "022" "022" "012" "03" "03" "023" "022"
#> Prog_433 Prog_439 Prog_445 Prog_451 Prog_457 Prog_463 LT-HSC_115 Prog_427 Prog_434
#> "03" "03" "03" "013" "014" "03" "012" "022" "011"
#> Prog_440 Prog_446 Prog_452 Prog_458 Prog_464 LT-HSC_116 Prog_428 Prog_435 Prog_441
#> "043" "03" "0212" "043" "03" "03" "012" "0411" "012"
#> Prog_447 Prog_453 Prog_459 Prog_465 LT-HSC_117 Prog_429 Prog_436 Prog_442 Prog_448
#> "012" "014" "03" "043" "03" "011" "012" "0211" "03"
#> Prog_454 Prog_460 Prog_466 LT-HSC_118 Prog_430 Prog_437 Prog_443 Prog_449 Prog_455
#> "0412" "042" "0411" "0211" "011" "013" "013" "011" "03"
#> Prog_461 Prog_467 LT-HSC_119 Prog_431 Prog_438 Prog_444 Prog_450 Prog_456 Prog_462
#> "022" "03" "0213" "03" "022" "011" "012" "012" "042"
#> Prog_468 LT-HSC_120 Prog_432 HSPC_475 HSPC_481 HSPC_487 HSPC_493 HSPC_499 HSPC_505
#> "0411" "0413" "043" "022" "023" "0212" "022" "022" "042"
#> LT-HSC_121 HSPC_469 HSPC_476 HSPC_482 HSPC_488 HSPC_494 HSPC_500 HSPC_506 LT-HSC_122
#> "0213" "023" "0211" "022" "022" "022" "022" "022" "042"
#> HSPC_470 HSPC_477 HSPC_483 HSPC_489 HSPC_495 HSPC_501 HSPC_507 LT-HSC_123 HSPC_471
#> "022" "012" "022" "042" "043" "023" "022" "022" "022"
#> HSPC_478 HSPC_484 HSPC_490 HSPC_496 HSPC_502 HSPC_508 LT-HSC_124 HSPC_472 HSPC_479
#> "022" "0211" "03" "03" "03" "013" "03" "03" "03"
#> HSPC_485 HSPC_491 HSPC_497 HSPC_503 HSPC_509 LT-HSC_125 HSPC_473 HSPC_480 HSPC_486
#> "012" "0412" "022" "012" "042" "03" "03" "03" "042"
#> HSPC_492 HSPC_498 HSPC_504 HSPC_510 LT-HSC_126 HSPC_474 Prog_475 Prog_481 Prog_487
#> "03" "03" "022" "0412" "03" "03" "013" "03" "013"
#> Prog_493 Prog_499 Prog_505 LT-HSC_127 Prog_469 Prog_476 Prog_482 Prog_488 Prog_494
#> "012" "012" "013" "0212" "042" "012" "012" "013" "043"
#> Prog_500 Prog_506 LT-HSC_128 Prog_470 Prog_477 Prog_483 Prog_489 Prog_495 Prog_501
#> "013" "012" "03" "012" "011" "043" "012" "03" "012"
#> Prog_507 LT-HSC_129 Prog_471 Prog_478 Prog_484 Prog_490 Prog_496 Prog_502 Prog_508
#> "0411" "0211" "012" "011" "012" "043" "03" "011" "011"
#> LT-HSC_130 Prog_472 Prog_479 Prog_485 Prog_491 Prog_497 Prog_503 Prog_509 LT-HSC_131
#> "013" "043" "012" "013" "013" "0411" "043" "03" "03"
#> Prog_473 Prog_480 Prog_486 Prog_492 Prog_498 Prog_504 Prog_510 LT-HSC_132 Prog_474
#> "012" "023" "012" "03" "0213" "012" "042" "014" "03"
#> HSPC_517 HSPC_523 HSPC_529 HSPC_535 HSPC_541 HSPC_547 LT-HSC_133 HSPC_511 HSPC_518
#> "023" "03" "0211" "022" "022" "03" "0212" "023" "022"
#> HSPC_524 HSPC_530 HSPC_536 HSPC_542 HSPC_548 LT-HSC_134 HSPC_512 HSPC_519 HSPC_525
#> "022" "022" "0211" "0211" "022" "023" "03" "0211" "023"
#> HSPC_531 HSPC_537 HSPC_543 HSPC_549 LT-HSC_135 HSPC_513 HSPC_520 HSPC_526 HSPC_532
#> "022" "042" "042" "022" "022" "0212" "042" "03" "042"
#> HSPC_538 HSPC_544 HSPC_550 LT-HSC_136 HSPC_514 HSPC_521 HSPC_527 HSPC_533 HSPC_539
#> "03" "012" "042" "023" "03" "022" "012" "03" "022"
#> HSPC_545 HSPC_551 LT-HSC_137 HSPC_515 HSPC_522 HSPC_528 HSPC_534 HSPC_540 HSPC_546
#> "022" "042" "022" "03" "022" "0413" "03" "03" "022"
#> HSPC_552 LT-HSC_138 HSPC_516 Prog_517 Prog_523 Prog_529 Prog_535 Prog_541 Prog_547
#> "042" "022" "03" "03" "011" "013" "011" "013" "013"
#> LT-HSC_139 Prog_511 Prog_518 Prog_524 Prog_530 Prog_536 Prog_542 Prog_548 LT-HSC_140
#> "03" "03" "0413" "042" "012" "011" "0413" "011" "022"
#> Prog_512 Prog_519 Prog_525 Prog_531 Prog_537 Prog_543 Prog_549 LT-HSC_141 Prog_513
#> "0411" "042" "043" "013" "022" "014" "0413" "0211" "03"
#> Prog_520 Prog_526 Prog_532 Prog_538 Prog_544 Prog_550 LT-HSC_142 Prog_514 Prog_521
#> "013" "023" "022" "0212" "023" "012" "012" "012" "012"
#> Prog_527 Prog_533 Prog_539 Prog_545 Prog_551 LT-HSC_143 Prog_515 Prog_522 Prog_528
#> "012" "022" "0411" "014" "012" "013" "043" "022" "014"
#> Prog_534 Prog_540 Prog_546 Prog_552 LT-HSC_144 Prog_516 HSPC_559 HSPC_565 HSPC_571
#> "043" "023" "023" "0412" "042" "011" "022" "023" "03"
#> HSPC_577 HSPC_583 HSPC_589 LT-HSC_145 HSPC_553 HSPC_560 HSPC_566 HSPC_572 HSPC_578
#> "022" "0211" "022" "022" "013" "022" "022" "023" "022"
#> HSPC_584 HSPC_590 LT-HSC_146 HSPC_554 HSPC_561 HSPC_567 HSPC_573 HSPC_579 HSPC_585
#> "022" "042" "03" "022" "0211" "03" "022" "03" "022"
#> HSPC_591 LT-HSC_147 HSPC_555 HSPC_562 HSPC_568 HSPC_574 HSPC_580 HSPC_586 HSPC_592
#> "023" "022" "022" "023" "022" "012" "03" "03" "03"
#> LT-HSC_148 HSPC_556 HSPC_563 HSPC_569 HSPC_575 HSPC_581 HSPC_587 HSPC_593 LT-HSC_149
#> "042" "03" "03" "0413" "03" "0211" "0211" "022" "022"
#> HSPC_557 HSPC_564 HSPC_570 HSPC_576 HSPC_582 HSPC_588 HSPC_594 LT-HSC_150 HSPC_558
#> "03" "0211" "0211" "022" "022" "0212" "022" "022" "0211"
#> Prog_559 Prog_565 Prog_571 Prog_577 Prog_583 Prog_589 LT-HSC_151 Prog_553 Prog_560
#> "012" "012" "012" "012" "023" "023" "03" "043" "012"
#> Prog_566 Prog_572 Prog_578 Prog_584 Prog_590 LT-HSC_152 Prog_554 Prog_561 Prog_567
#> "014" "03" "0413" "012" "012" "022" "03" "042" "012"
#> Prog_573 Prog_579 Prog_585 Prog_591 LT-HSC_153 Prog_555 Prog_562 Prog_568 Prog_574
#> "023" "012" "03" "023" "022" "03" "011" "03" "012"
#> Prog_580 Prog_586 Prog_592 LT-HSC_154 Prog_556 Prog_563 Prog_569 Prog_575 Prog_581
#> "03" "043" "011" "0211" "03" "0213" "013" "011" "012"
#> Prog_587 Prog_593 LT-HSC_155 Prog_557 Prog_564 Prog_570 Prog_576 Prog_582 Prog_588
#> "013" "012" "0211" "012" "03" "0411" "014" "012" "03"
#> Prog_594 LT-HSC_156 Prog_558 HSPC_601 HSPC_607 HSPC_613 HSPC_619 HSPC_625 HSPC_631
#> "03" "012" "03" "042" "023" "042" "0211" "022" "0412"
#> LT-HSC_157 HSPC_595 HSPC_602 HSPC_608 HSPC_614 HSPC_620 HSPC_626 HSPC_632 LT-HSC_158
#> "023" "03" "022" "022" "042" "022" "023" "0211" "022"
#> HSPC_596 HSPC_603 HSPC_609 HSPC_615 HSPC_621 HSPC_627 HSPC_633 LT-HSC_159 HSPC_597
#> "042" "03" "023" "023" "0211" "042" "023" "0411" "042"
#> HSPC_604 HSPC_610 HSPC_616 HSPC_622 HSPC_628 HSPC_634 LT-HSC_160 HSPC_598 HSPC_605
#> "022" "022" "0211" "0211" "042" "042" "023" "042" "0213"
#> HSPC_611 HSPC_617 HSPC_623 HSPC_629 HSPC_635 LT-HSC_161 HSPC_599 HSPC_606 HSPC_612
#> "0211" "03" "042" "042" "042" "023" "022" "03" "03"
#> HSPC_618 HSPC_624 HSPC_630 HSPC_636 LT-HSC_162 HSPC_600 Prog_601 Prog_607 Prog_613
#> "022" "03" "022" "03" "023" "023" "0211" "012" "03"
#> Prog_619 Prog_625 Prog_631 LT-HSC_163 Prog_595 Prog_602 Prog_608 Prog_614 Prog_620
#> "022" "0413" "03" "022" "022" "013" "011" "013" "042"
#> Prog_626 Prog_632 LT-HSC_164 Prog_596 Prog_603 Prog_609 Prog_615 Prog_621 Prog_627
#> "012" "012" "03" "03" "011" "012" "0411" "012" "03"
#> Prog_633 LT-HSC_165 Prog_597 Prog_604 Prog_610 Prog_616 Prog_622 Prog_628 Prog_634
#> "043" "022" "03" "03" "03" "011" "012" "012" "043"
#> LT-HSC_166 Prog_598 Prog_605 Prog_611 Prog_617 Prog_623 Prog_629 Prog_635 LT-HSC_167
#> "042" "012" "014" "03" "03" "013" "012" "03" "022"
#> Prog_599 Prog_606 Prog_612 Prog_618 Prog_624 Prog_630 Prog_636 LT-HSC_168 Prog_600
#> "012" "03" "013" "012" "012" "013" "0213" "013" "012"
#> HSPC_643 HSPC_649 HSPC_655 HSPC_661 HSPC_667 HSPC_673 LT-HSC_169 HSPC_637 HSPC_644
#> "042" "03" "0212" "042" "022" "022" "023" "03" "013"
#> HSPC_650 HSPC_656 HSPC_662 HSPC_668 HSPC_674 LT-HSC_170 HSPC_638 HSPC_645 HSPC_651
#> "0211" "022" "022" "03" "03" "042" "013" "03" "0411"
#> HSPC_657 HSPC_663 HSPC_669 HSPC_675 LT-HSC_171 HSPC_639 HSPC_646 HSPC_652 HSPC_658
#> "023" "0412" "022" "0212" "042" "03" "03" "042" "0412"
#> HSPC_664 HSPC_670 HSPC_676 LT-HSC_172 HSPC_640 HSPC_647 HSPC_653 HSPC_659 HSPC_665
#> "03" "023" "022" "022" "03" "022" "0211" "0211" "042"
#> HSPC_671 HSPC_677 LT-HSC_173 HSPC_641 HSPC_648 HSPC_654 HSPC_660 HSPC_666 HSPC_672
#> "03" "023" "022" "03" "022" "042" "043" "0413" "03"
#> HSPC_678 LT-HSC_174 HSPC_642 Prog_643 Prog_649 Prog_655 Prog_661 Prog_667 Prog_673
#> "022" "03" "0211" "0412" "011" "011" "013" "043" "042"
#> LT-HSC_175 Prog_637 Prog_644 Prog_650 Prog_656 Prog_662 Prog_668 Prog_674 LT-HSC_176
#> "0211" "014" "03" "012" "03" "03" "023" "03" "022"
#> Prog_638 Prog_645 Prog_651 Prog_657 Prog_663 Prog_669 Prog_675 LT-HSC_177 Prog_639
#> "011" "043" "03" "011" "011" "023" "012" "022" "014"
#> Prog_646 Prog_652 Prog_658 Prog_664 Prog_670 Prog_676 LT-HSC_178 Prog_640 Prog_647
#> "012" "012" "012" "023" "012" "03" "0211" "011" "043"
#> Prog_653 Prog_659 Prog_665 Prog_671 Prog_677 LT-HSC_179 Prog_641 Prog_648 Prog_654
#> "043" "03" "03" "03" "011" "03" "023" "042" "013"
#> Prog_660 Prog_666 Prog_672 Prog_678 LT-HSC_180 Prog_642 HSPC_685 HSPC_691 HSPC_697
#> "03" "03" "03" "0411" "043" "03" "0213" "0212" "0413"
#> HSPC_703 HSPC_709 HSPC_715 LT-HSC_181 HSPC_679 HSPC_686 HSPC_692 HSPC_698 HSPC_704
#> "022" "023" "0212" "0212" "03" "0211" "023" "022" "022"
#> HSPC_710 HSPC_716 LT-HSC_182 HSPC_680 HSPC_687 HSPC_693 HSPC_699 HSPC_705 HSPC_711
#> "0211" "022" "0213" "022" "023" "023" "022" "012" "0211"
#> HSPC_717 LT-HSC_183 HSPC_681 HSPC_688 HSPC_694 HSPC_700 HSPC_706 HSPC_712 HSPC_718
#> "0412" "03" "042" "0211" "0211" "0413" "03" "0211" "0211"
#> LT-HSC_184 HSPC_682 HSPC_689 HSPC_695 HSPC_701 HSPC_707 HSPC_713 HSPC_719 LT-HSC_185
#> "03" "012" "022" "013" "042" "042" "0212" "022" "023"
#> HSPC_683 HSPC_690 HSPC_696 HSPC_702 HSPC_708 HSPC_714 HSPC_720 LT-HSC_186 HSPC_684
#> "0412" "022" "043" "022" "03" "022" "012" "0211" "023"
#> Prog_685 Prog_691 Prog_697 Prog_703 Prog_709 Prog_715 LT-HSC_187 Prog_679 Prog_686
#> "012" "0213" "011" "043" "014" "012" "03" "012" "0413"
#> Prog_692 Prog_698 Prog_704 Prog_710 Prog_716 LT-HSC_188 Prog_680 Prog_687 Prog_693
#> "03" "013" "03" "03" "03" "03" "012" "012" "012"
#> Prog_699 Prog_705 Prog_711 Prog_717 LT-HSC_189 Prog_681 Prog_688 Prog_694 Prog_700
#> "012" "012" "03" "012" "0211" "013" "011" "03" "011"
#> Prog_706 Prog_712 Prog_718 LT-HSC_190 Prog_682 Prog_689 Prog_695 Prog_701 Prog_707
#> "013" "013" "012" "023" "013" "03" "011" "011" "03"
#> Prog_713 Prog_719 LT-HSC_191 Prog_683 Prog_690 Prog_696 Prog_702 Prog_708 Prog_714
#> "013" "011" "03" "023" "03" "0411" "014" "014" "014"
#> Prog_720 LT-HSC_192 Prog_684 HSPC_727 HSPC_733 HSPC_739 HSPC_745 HSPC_751 HSPC_757
#> "014" "012" "03" "022" "022" "023" "023" "022" "022"
#> LT-HSC_193 HSPC_721 HSPC_728 HSPC_734 HSPC_740 HSPC_746 HSPC_752 HSPC_758 LT-HSC_194
#> "022" "023" "0213" "012" "022" "023" "023" "03" "022"
#> HSPC_722 HSPC_729 HSPC_735 HSPC_741 HSPC_747 HSPC_753 HSPC_759 LT-HSC_195 HSPC_723
#> "03" "03" "042" "0211" "022" "03" "03" "03" "03"
#> HSPC_730 HSPC_736 HSPC_742 HSPC_748 HSPC_754 HSPC_760 LT-HSC_196 HSPC_724 HSPC_731
#> "03" "03" "03" "022" "0213" "042" "0211" "03" "0412"
#> HSPC_737 HSPC_743 HSPC_749 HSPC_755 HSPC_761 LT-HSC_197 HSPC_725 HSPC_732 HSPC_738
#> "012" "03" "022" "03" "03" "022" "023" "03" "022"
#> HSPC_744 HSPC_750 HSPC_756 HSPC_762 LT-HSC_198 HSPC_726 Prog_727 Prog_733 Prog_739
#> "042" "03" "022" "042" "022" "0213" "012" "03" "0412"
#> Prog_745 Prog_751 Prog_757 LT-HSC_199 Prog_721 Prog_728 Prog_734 Prog_740 Prog_746
#> "03" "03" "0412" "0211" "014" "03" "014" "03" "0411"
#> Prog_752 Prog_758 LT-HSC_200 Prog_722 Prog_729 Prog_735 Prog_741 Prog_747 Prog_753
#> "03" "03" "022" "014" "023" "012" "0213" "03" "013"
#> Prog_759 LT-HSC_201 Prog_723 Prog_730 Prog_736 Prog_742 Prog_748 Prog_754 Prog_760
#> "012" "022" "011" "011" "013" "0213" "0413" "013" "012"
#> LT-HSC_202 Prog_724 Prog_731 Prog_737 Prog_743 Prog_749 Prog_755 Prog_761 LT-HSC_203
#> "03" "03" "011" "03" "012" "043" "0213" "0412" "0213"
#> Prog_725 Prog_732 Prog_738 Prog_744 Prog_750 Prog_756 Prog_762 LT-HSC_204 Prog_726
#> "03" "043" "03" "03" "0413" "043" "03" "03" "03"
#> HSPC_769 HSPC_775 HSPC_781 HSPC_787 HSPC_793 HSPC_799 LT-HSC_205 HSPC_763 HSPC_770
#> "023" "023" "022" "023" "0212" "023" "023" "0212" "042"
#> HSPC_776 HSPC_782 HSPC_788 HSPC_794 HSPC_800 LT-HSC_206 HSPC_764 HSPC_771 HSPC_777
#> "023" "022" "023" "03" "0413" "022" "022" "03" "03"
#> HSPC_783 HSPC_789 HSPC_795 HSPC_801 LT-HSC_207 HSPC_765 HSPC_772 HSPC_778 HSPC_784
#> "022" "042" "03" "03" "042" "023" "042" "03" "03"
#> HSPC_790 HSPC_796 HSPC_802 LT-HSC_208 HSPC_766 HSPC_773 HSPC_779 HSPC_785 HSPC_791
#> "042" "012" "022" "022" "012" "03" "042" "03" "043"
#> HSPC_797 HSPC_803 LT-HSC_209 HSPC_767 HSPC_774 HSPC_780 HSPC_786 HSPC_792 HSPC_798
#> "03" "022" "0211" "012" "03" "03" "03" "0213" "022"
#> HSPC_804 LT-HSC_210 HSPC_768 Prog_769 Prog_775 Prog_781 Prog_787 Prog_793 Prog_799
#> "022" "022" "023" "012" "03" "012" "043" "013" "03"
#> LT-HSC_211 Prog_763 Prog_770 Prog_776 Prog_782 Prog_788 Prog_794 Prog_800 LT-HSC_212
#> "042" "012" "014" "011" "012" "011" "012" "012" "03"
#> Prog_764 Prog_771 Prog_777 Prog_783 Prog_789 Prog_795 Prog_801 LT-HSC_213 Prog_765
#> "012" "014" "012" "014" "012" "012" "013" "022" "013"
#> Prog_772 Prog_778 Prog_784 Prog_790 Prog_796 Prog_802 LT-HSC_214 Prog_766 Prog_773
#> "012" "023" "03" "011" "0412" "014" "03" "0212" "0212"
#> Prog_779 Prog_785 Prog_791 Prog_797 Prog_803 LT-HSC_215 Prog_767 Prog_774 Prog_780
#> "013" "03" "012" "03" "043" "03" "011" "012" "011"
#> Prog_786 Prog_792 Prog_798 Prog_804 LT-HSC_216 Prog_768 HSPC_811 HSPC_817 HSPC_823
#> "011" "013" "013" "012" "0411" "012" "0212" "0212" "0212"
#> HSPC_829 HSPC_835 HSPC_841 HSPC_847 HSPC_805 HSPC_812 HSPC_818 HSPC_824 HSPC_830
#> "0213" "03" "043" "023" "0212" "012" "03" "03" "0212"
#> HSPC_836 HSPC_842 HSPC_848 HSPC_806 HSPC_813 HSPC_819 HSPC_825 HSPC_831 HSPC_837
#> "023" "023" "022" "023" "012" "042" "03" "03" "0412"
#> HSPC_843 HSPC_849 HSPC_807 HSPC_814 HSPC_820 HSPC_826 HSPC_832 HSPC_838 HSPC_844
#> "03" "022" "012" "0413" "012" "03" "03" "03" "022"
#> HSPC_850 HSPC_808 HSPC_815 HSPC_821 HSPC_827 HSPC_833 HSPC_839 HSPC_845 HSPC_851
#> "0211" "012" "03" "042" "022" "012" "0413" "03" "023"
#> HSPC_809 HSPC_816 HSPC_822 HSPC_828 HSPC_834 HSPC_840 HSPC_846 HSPC_852 HSPC_810
#> "022" "042" "03" "03" "03" "022" "042" "022" "022"
#> Prog_811 Prog_817 Prog_823 Prog_829 Prog_835 Prog_841 Prog_847 Prog_805 Prog_812
#> "014" "013" "03" "012" "014" "0411" "012" "042" "023"
#> Prog_818 Prog_824 Prog_830 Prog_836 Prog_842 Prog_848 Prog_806 Prog_813 Prog_819
#> "014" "012" "011" "013" "014" "022" "03" "011" "011"
#> Prog_825 Prog_831 Prog_837 Prog_843 Prog_849 Prog_807 Prog_814 Prog_820 Prog_826
#> "011" "014" "014" "013" "042" "014" "011" "013" "011"
#> Prog_832 Prog_838 Prog_844 Prog_850 Prog_808 Prog_815 Prog_821 Prog_827 Prog_833
#> "012" "011" "014" "014" "012" "014" "011" "03" "012"
#> Prog_839 Prog_845 Prog_851 Prog_809 Prog_816 Prog_822 Prog_828 Prog_834 Prog_840
#> "013" "013" "03" "013" "012" "011" "011" "012" "012"
#> Prog_846 Prog_852 Prog_810
#> "012" "0411" "013"
get_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 3285))
#> HSPC_007 HSPC_013 HSPC_019 HSPC_025 HSPC_031 HSPC_037 LT-HSC_001 HSPC_001 HSPC_008
#> "021" "023" "021" "042" "03" "042" "023" "012" "042"
#> HSPC_014 HSPC_020 HSPC_026 HSPC_032 HSPC_038 LT-HSC_002 HSPC_002 HSPC_009 HSPC_015
#> "022" "042" "0412" "021" "022" "042" "022" "022" "023"
#> HSPC_021 HSPC_027 HSPC_033 HSPC_039 LT-HSC_003 HSPC_003 HSPC_010 HSPC_016 HSPC_022
#> "022" "03" "03" "021" "023" "012" "021" "012" "0412"
#> HSPC_028 HSPC_034 HSPC_040 LT-HSC_004 HSPC_004 HSPC_011 HSPC_017 HSPC_023 HSPC_029
#> "03" "012" "03" "022" "03" "042" "022" "042" "021"
#> HSPC_035 HSPC_041 LT-HSC_005 HSPC_005 HSPC_012 HSPC_018 HSPC_024 HSPC_030 HSPC_036
#> "022" "042" "021" "021" "042" "042" "022" "03" "012"
#> HSPC_042 LT-HSC_006 HSPC_006 Prog_007 Prog_013 Prog_019 Prog_025 Prog_031 Prog_037
#> "03" "022" "0412" "012" "012" "013" "0411" "03" "03"
#> LT-HSC_007 Prog_001 Prog_008 Prog_014 Prog_020 Prog_026 Prog_032 Prog_038 LT-HSC_008
#> "042" "043" "011" "011" "014" "03" "014" "014" "03"
#> Prog_002 Prog_009 Prog_015 Prog_021 Prog_027 Prog_033 Prog_039 LT-HSC_009 Prog_003
#> "012" "011" "012" "014" "012" "011" "011" "022" "012"
#> Prog_010 Prog_016 Prog_022 Prog_028 Prog_034 Prog_040 LT-HSC_010 Prog_004 Prog_011
#> "0412" "0411" "0411" "011" "021" "042" "0412" "03" "014"
#> Prog_017 Prog_023 Prog_029 Prog_035 Prog_041 LT-HSC_011 Prog_005 Prog_012 Prog_018
#> "012" "012" "014" "011" "021" "021" "021" "022" "022"
#> Prog_024 Prog_030 Prog_036 Prog_042 LT-HSC_012 Prog_006 HSPC_049 HSPC_055 HSPC_061
#> "014" "0411" "0412" "0411" "0411" "011" "03" "042" "042"
#> HSPC_067 HSPC_073 HSPC_079 LT-HSC_013 HSPC_043 HSPC_050 HSPC_056 HSPC_062 HSPC_068
#> "042" "022" "0412" "022" "042" "043" "022" "0413" "022"
#> HSPC_074 HSPC_080 LT-HSC_014 HSPC_044 HSPC_051 HSPC_057 HSPC_063 HSPC_069 HSPC_075
#> "022" "03" "022" "043" "03" "022" "0412" "03" "022"
#> HSPC_081 LT-HSC_015 HSPC_045 HSPC_052 HSPC_058 HSPC_064 HSPC_070 HSPC_076 HSPC_082
#> "03" "022" "042" "043" "03" "0413" "03" "03" "042"
#> LT-HSC_016 HSPC_046 HSPC_053 HSPC_059 HSPC_065 HSPC_071 HSPC_077 HSPC_083 LT-HSC_017
#> "022" "03" "012" "021" "03" "0413" "012" "022" "022"
#> HSPC_047 HSPC_054 HSPC_060 HSPC_066 HSPC_072 HSPC_078 HSPC_084 LT-HSC_018 HSPC_048
#> "023" "03" "03" "03" "0413" "043" "042" "022" "03"
#> Prog_049 Prog_055 Prog_061 Prog_067 Prog_073 Prog_079 LT-HSC_019 Prog_043 Prog_050
#> "011" "012" "011" "014" "03" "011" "021" "013" "012"
#> Prog_056 Prog_062 Prog_068 Prog_074 Prog_080 LT-HSC_020 Prog_044 Prog_051 Prog_057
#> "012" "042" "03" "0411" "043" "03" "03" "014" "013"
#> Prog_063 Prog_069 Prog_075 Prog_081 LT-HSC_021 Prog_045 Prog_052 Prog_058 Prog_064
#> "043" "012" "012" "011" "0413" "013" "043" "014" "014"
#> Prog_070 Prog_076 Prog_082 LT-HSC_022 Prog_046 Prog_053 Prog_059 Prog_065 Prog_071
#> "0412" "014" "011" "022" "011" "011" "012" "013" "012"
#> Prog_077 Prog_083 LT-HSC_023 Prog_047 Prog_054 Prog_060 Prog_066 Prog_072 Prog_078
#> "012" "012" "022" "012" "0411" "021" "014" "03" "014"
#> Prog_084 LT-HSC_024 Prog_048 HSPC_091 HSPC_097 HSPC_103 HSPC_109 HSPC_115 HSPC_121
#> "011" "03" "03" "021" "023" "022" "043" "022" "023"
#> LT-HSC_025 HSPC_085 HSPC_092 HSPC_098 HSPC_104 HSPC_110 HSPC_116 HSPC_122 LT-HSC_026
#> "021" "042" "021" "043" "023" "043" "021" "03" "022"
#> HSPC_086 HSPC_093 HSPC_099 HSPC_105 HSPC_111 HSPC_117 HSPC_123 LT-HSC_027 HSPC_087
#> "021" "021" "042" "022" "022" "042" "022" "023" "022"
#> HSPC_094 HSPC_100 HSPC_106 HSPC_112 HSPC_118 HSPC_124 LT-HSC_028 HSPC_088 HSPC_095
#> "012" "03" "022" "021" "03" "021" "03" "03" "022"
#> HSPC_101 HSPC_107 HSPC_113 HSPC_119 HSPC_125 LT-HSC_029 HSPC_089 HSPC_096 HSPC_102
#> "012" "042" "023" "023" "03" "021" "03" "043" "012"
#> HSPC_108 HSPC_114 HSPC_120 HSPC_126 LT-HSC_030 HSPC_090 Prog_091 Prog_097 Prog_103
#> "03" "03" "03" "03" "021" "012" "011" "012" "012"
#> Prog_109 Prog_115 Prog_121 LT-HSC_031 Prog_085 Prog_092 Prog_098 Prog_104 Prog_110
#> "0412" "014" "021" "03" "012" "03" "011" "021" "011"
#> Prog_116 Prog_122 LT-HSC_032 Prog_086 Prog_093 Prog_099 Prog_105 Prog_111 Prog_117
#> "012" "03" "011" "021" "012" "012" "012" "014" "013"
#> Prog_123 LT-HSC_033 Prog_087 Prog_094 Prog_100 Prog_106 Prog_112 Prog_118 Prog_124
#> "012" "03" "012" "014" "011" "03" "011" "0412" "03"
#> LT-HSC_034 Prog_088 Prog_095 Prog_101 Prog_107 Prog_113 Prog_119 Prog_125 LT-HSC_035
#> "03" "043" "011" "013" "011" "012" "011" "03" "021"
#> Prog_089 Prog_096 Prog_102 Prog_108 Prog_114 Prog_120 Prog_126 LT-HSC_036 Prog_090
#> "014" "03" "03" "0411" "0413" "023" "014" "03" "011"
#> HSPC_133 HSPC_139 HSPC_145 HSPC_151 HSPC_157 HSPC_163 LT-HSC_037 HSPC_127 HSPC_134
#> "022" "022" "023" "042" "043" "023" "023" "0412" "023"
#> HSPC_140 HSPC_146 HSPC_152 HSPC_158 HSPC_164 LT-HSC_038 HSPC_128 HSPC_135 HSPC_141
#> "023" "0412" "022" "042" "022" "023" "023" "03" "022"
#> HSPC_147 HSPC_153 HSPC_159 HSPC_165 LT-HSC_039 HSPC_129 HSPC_136 HSPC_142 HSPC_148
#> "023" "022" "042" "043" "022" "021" "042" "042" "043"
#> HSPC_154 HSPC_160 HSPC_166 LT-HSC_040 HSPC_130 HSPC_137 HSPC_143 HSPC_149 HSPC_155
#> "043" "021" "042" "022" "042" "021" "022" "022" "023"
#> HSPC_161 HSPC_167 LT-HSC_041 HSPC_131 HSPC_138 HSPC_144 HSPC_150 HSPC_156 HSPC_162
#> "042" "023" "022" "022" "012" "03" "021" "012" "03"
#> HSPC_168 LT-HSC_042 HSPC_132 Prog_133 Prog_139 Prog_145 Prog_151 Prog_157 Prog_163
#> "0413" "022" "013" "012" "011" "012" "03" "012" "011"
#> LT-HSC_043 Prog_127 Prog_134 Prog_140 Prog_146 Prog_152 Prog_158 Prog_164 LT-HSC_044
#> "013" "03" "043" "011" "011" "043" "011" "021" "043"
#> Prog_128 Prog_135 Prog_141 Prog_147 Prog_153 Prog_159 Prog_165 LT-HSC_045 Prog_129
#> "012" "03" "013" "021" "012" "0412" "043" "0412" "013"
#> Prog_136 Prog_142 Prog_148 Prog_154 Prog_160 Prog_166 LT-HSC_046 Prog_130 Prog_137
#> "013" "03" "023" "03" "022" "014" "03" "013" "012"
#> Prog_143 Prog_149 Prog_155 Prog_161 Prog_167 LT-HSC_047 Prog_131 Prog_138 Prog_144
#> "013" "0413" "012" "03" "012" "021" "03" "021" "043"
#> Prog_150 Prog_156 Prog_162 Prog_168 LT-HSC_048 Prog_132 HSPC_175 HSPC_181 HSPC_187
#> "013" "021" "0412" "013" "023" "013" "042" "022" "022"
#> HSPC_193 HSPC_199 HSPC_205 LT-HSC_049 HSPC_169 HSPC_176 HSPC_182 HSPC_188 HSPC_194
#> "03" "03" "022" "022" "042" "022" "023" "021" "021"
#> HSPC_200 HSPC_206 LT-HSC_050 HSPC_170 HSPC_177 HSPC_183 HSPC_189 HSPC_195 HSPC_201
#> "022" "012" "022" "023" "022" "03" "03" "012" "021"
#> HSPC_207 LT-HSC_051 HSPC_171 HSPC_178 HSPC_184 HSPC_190 HSPC_196 HSPC_202 HSPC_208
#> "03" "022" "022" "03" "021" "0413" "042" "03" "022"
#> LT-HSC_052 HSPC_172 HSPC_179 HSPC_185 HSPC_191 HSPC_197 HSPC_203 HSPC_209 LT-HSC_053
#> "012" "012" "012" "023" "022" "021" "042" "021" "021"
#> HSPC_173 HSPC_180 HSPC_186 HSPC_192 HSPC_198 HSPC_204 HSPC_210 LT-HSC_054 HSPC_174
#> "023" "043" "03" "022" "03" "0412" "043" "022" "03"
#> Prog_175 Prog_181 Prog_187 Prog_193 Prog_199 Prog_205 LT-HSC_055 Prog_169 Prog_176
#> "0411" "021" "03" "042" "03" "0413" "013" "021" "012"
#> Prog_182 Prog_188 Prog_194 Prog_200 Prog_206 LT-HSC_056 Prog_170 Prog_177 Prog_183
#> "043" "014" "023" "043" "012" "013" "011" "042" "013"
#> Prog_189 Prog_195 Prog_201 Prog_207 LT-HSC_057 Prog_171 Prog_178 Prog_184 Prog_190
#> "012" "042" "0412" "014" "03" "042" "011" "013" "012"
#> Prog_196 Prog_202 Prog_208 LT-HSC_058 Prog_172 Prog_179 Prog_185 Prog_191 Prog_197
#> "011" "021" "03" "03" "014" "013" "011" "03" "013"
#> Prog_203 Prog_209 LT-HSC_059 Prog_173 Prog_180 Prog_186 Prog_192 Prog_198 Prog_204
#> "013" "013" "021" "043" "03" "012" "012" "021" "023"
#> Prog_210 LT-HSC_060 Prog_174 HSPC_217 HSPC_223 HSPC_229 HSPC_235 HSPC_241 HSPC_247
#> "03" "013" "021" "021" "022" "023" "022" "021" "023"
#> LT-HSC_061 HSPC_211 HSPC_218 HSPC_224 HSPC_230 HSPC_236 HSPC_242 HSPC_248 LT-HSC_062
#> "021" "042" "022" "022" "042" "043" "023" "022" "023"
#> HSPC_212 HSPC_219 HSPC_225 HSPC_231 HSPC_237 HSPC_243 HSPC_249 LT-HSC_063 HSPC_213
#> "023" "042" "022" "023" "022" "0412" "022" "03" "0413"
#> HSPC_220 HSPC_226 HSPC_232 HSPC_238 HSPC_244 HSPC_250 LT-HSC_064 HSPC_214 HSPC_221
#> "022" "021" "023" "021" "03" "0413" "011" "012" "03"
#> HSPC_227 HSPC_233 HSPC_239 HSPC_245 HSPC_251 LT-HSC_065 HSPC_215 HSPC_222 HSPC_228
#> "022" "042" "022" "022" "0413" "03" "0412" "042" "023"
#> HSPC_234 HSPC_240 HSPC_246 HSPC_252 LT-HSC_066 HSPC_216 Prog_217 Prog_223 Prog_229
#> "021" "03" "022" "021" "03" "012" "011" "042" "011"
#> Prog_235 Prog_241 Prog_247 LT-HSC_067 Prog_211 Prog_218 Prog_224 Prog_230 Prog_236
#> "023" "022" "03" "021" "011" "012" "013" "0413" "012"
#> Prog_242 Prog_248 LT-HSC_068 Prog_212 Prog_219 Prog_225 Prog_231 Prog_237 Prog_243
#> "014" "043" "012" "014" "021" "03" "013" "042" "013"
#> Prog_249 LT-HSC_069 Prog_213 Prog_220 Prog_226 Prog_232 Prog_238 Prog_244 Prog_250
#> "011" "03" "043" "021" "03" "03" "012" "03" "014"
#> LT-HSC_070 Prog_214 Prog_221 Prog_227 Prog_233 Prog_239 Prog_245 Prog_251 LT-HSC_071
#> "043" "0413" "011" "013" "012" "011" "012" "021" "03"
#> Prog_215 Prog_222 Prog_228 Prog_234 Prog_240 Prog_246 Prog_252 LT-HSC_072 Prog_216
#> "011" "03" "013" "012" "012" "03" "03" "012" "011"
#> HSPC_259 HSPC_265 HSPC_271 HSPC_277 HSPC_283 HSPC_289 LT-HSC_073 HSPC_253 HSPC_260
#> "023" "022" "0412" "023" "022" "022" "023" "0413" "021"
#> HSPC_266 HSPC_272 HSPC_278 HSPC_284 HSPC_290 LT-HSC_074 HSPC_254 HSPC_261 HSPC_267
#> "022" "021" "042" "021" "0413" "022" "022" "013" "03"
#> HSPC_273 HSPC_279 HSPC_285 HSPC_291 LT-HSC_075 HSPC_255 HSPC_262 HSPC_268 HSPC_274
#> "021" "043" "012" "03" "03" "03" "021" "012" "022"
#> HSPC_280 HSPC_286 HSPC_292 LT-HSC_076 HSPC_256 HSPC_263 HSPC_269 HSPC_275 HSPC_281
#> "0412" "042" "0412" "042" "011" "0412" "013" "013" "023"
#> HSPC_287 HSPC_293 LT-HSC_077 HSPC_257 HSPC_264 HSPC_270 HSPC_276 HSPC_282 HSPC_288
#> "0413" "0412" "023" "0413" "022" "03" "03" "012" "012"
#> HSPC_294 LT-HSC_078 HSPC_258 Prog_259 Prog_265 Prog_271 Prog_277 Prog_283 Prog_289
#> "0413" "022" "012" "03" "011" "03" "03" "042" "0412"
#> LT-HSC_079 Prog_253 Prog_260 Prog_266 Prog_272 Prog_278 Prog_284 Prog_290 LT-HSC_080
#> "021" "014" "012" "012" "012" "011" "014" "011" "03"
#> Prog_254 Prog_261 Prog_267 Prog_273 Prog_279 Prog_285 Prog_291 LT-HSC_081 Prog_255
#> "011" "014" "013" "013" "011" "014" "0411" "012" "012"
#> Prog_262 Prog_268 Prog_274 Prog_280 Prog_286 Prog_292 LT-HSC_082 Prog_256 Prog_263
#> "012" "012" "014" "03" "011" "012" "03" "042" "013"
#> Prog_269 Prog_275 Prog_281 Prog_287 Prog_293 LT-HSC_083 Prog_257 Prog_264 Prog_270
#> "011" "012" "014" "013" "03" "021" "021" "023" "013"
#> Prog_276 Prog_282 Prog_288 Prog_294 LT-HSC_084 Prog_258 HSPC_301 HSPC_307 HSPC_313
#> "012" "011" "011" "012" "03" "013" "023" "022" "042"
#> HSPC_319 HSPC_325 HSPC_331 LT-HSC_085 HSPC_295 HSPC_302 HSPC_308 HSPC_314 HSPC_320
#> "021" "022" "022" "022" "0413" "023" "043" "042" "043"
#> HSPC_326 HSPC_332 LT-HSC_086 HSPC_296 HSPC_303 HSPC_309 HSPC_315 HSPC_321 HSPC_327
#> "022" "012" "042" "022" "012" "022" "022" "042" "012"
#> HSPC_333 LT-HSC_087 HSPC_297 HSPC_304 HSPC_310 HSPC_316 HSPC_322 HSPC_328 HSPC_334
#> "012" "021" "022" "03" "022" "023" "03" "042" "022"
#> LT-HSC_088 HSPC_298 HSPC_305 HSPC_311 HSPC_317 HSPC_323 HSPC_329 HSPC_335 LT-HSC_089
#> "043" "03" "0412" "021" "023" "03" "042" "022" "022"
#> HSPC_299 HSPC_306 HSPC_312 HSPC_318 HSPC_324 HSPC_330 HSPC_336 LT-HSC_090 HSPC_300
#> "03" "03" "0413" "022" "03" "03" "022" "03" "012"
#> Prog_301 Prog_307 Prog_313 Prog_319 Prog_325 Prog_331 LT-HSC_091 Prog_295 Prog_302
#> "0411" "0412" "0413" "013" "012" "012" "011" "0412" "021"
#> Prog_308 Prog_314 Prog_320 Prog_326 Prog_332 LT-HSC_092 Prog_296 Prog_303 Prog_309
#> "012" "03" "012" "011" "012" "021" "012" "022" "022"
#> Prog_315 Prog_321 Prog_327 Prog_333 LT-HSC_093 Prog_297 Prog_304 Prog_310 Prog_316
#> "0411" "0411" "012" "043" "042" "043" "012" "0412" "0411"
#> Prog_322 Prog_328 Prog_334 LT-HSC_094 Prog_298 Prog_305 Prog_311 Prog_317 Prog_323
#> "043" "0411" "014" "042" "014" "0413" "043" "021" "0411"
#> Prog_329 Prog_335 LT-HSC_095 Prog_299 Prog_306 Prog_312 Prog_318 Prog_324 Prog_330
#> "0411" "0413" "011" "011" "022" "011" "011" "011" "013"
#> Prog_336 LT-HSC_096 Prog_300 HSPC_343 HSPC_349 HSPC_355 HSPC_361 HSPC_367 HSPC_373
#> "013" "012" "013" "013" "03" "021" "023" "022" "023"
#> LT-HSC_097 HSPC_337 HSPC_344 HSPC_350 HSPC_356 HSPC_362 HSPC_368 HSPC_374 LT-HSC_098
#> "021" "022" "0412" "022" "043" "0411" "042" "03" "011"
#> HSPC_338 HSPC_345 HSPC_351 HSPC_357 HSPC_363 HSPC_369 HSPC_375 LT-HSC_099 HSPC_339
#> "011" "043" "043" "021" "022" "021" "021" "023" "03"
#> HSPC_346 HSPC_352 HSPC_358 HSPC_364 HSPC_370 HSPC_376 LT-HSC_100 HSPC_340 HSPC_347
#> "012" "0412" "042" "042" "013" "042" "011" "021" "021"
#> HSPC_353 HSPC_359 HSPC_365 HSPC_371 HSPC_377 LT-HSC_101 HSPC_341 HSPC_348 HSPC_354
#> "012" "03" "023" "012" "0413" "0411" "012" "03" "022"
#> HSPC_360 HSPC_366 HSPC_372 HSPC_378 LT-HSC_102 HSPC_342 Prog_343 Prog_349 Prog_355
#> "042" "021" "042" "021" "011" "013" "013" "0411" "0413"
#> Prog_361 Prog_367 Prog_373 LT-HSC_103 Prog_337 Prog_344 Prog_350 Prog_356 Prog_362
#> "014" "013" "011" "013" "011" "021" "014" "011" "0412"
#> Prog_368 Prog_374 LT-HSC_104 Prog_338 Prog_345 Prog_351 Prog_357 Prog_363 Prog_369
#> "014" "014" "021" "012" "0411" "014" "011" "014" "0411"
#> Prog_375 LT-HSC_105 Prog_339 Prog_346 Prog_352 Prog_358 Prog_364 Prog_370 Prog_376
#> "011" "0411" "011" "014" "011" "03" "011" "0411" "011"
#> LT-HSC_106 Prog_340 Prog_347 Prog_353 Prog_359 Prog_365 Prog_371 Prog_377 LT-HSC_107
#> "0412" "014" "021" "013" "011" "021" "012" "011" "023"
#> Prog_341 Prog_348 Prog_354 Prog_360 Prog_366 Prog_372 Prog_378 LT-HSC_108 Prog_342
#> "012" "021" "0412" "011" "014" "011" "03" "012" "011"
#> HSPC_385 HSPC_391 HSPC_397 HSPC_403 HSPC_409 HSPC_415 HSPC_421 HSPC_379 HSPC_386
#> "021" "03" "021" "042" "023" "023" "043" "021" "042"
#> HSPC_392 HSPC_398 HSPC_404 HSPC_410 HSPC_416 HSPC_422 HSPC_380 HSPC_387 HSPC_393
#> "03" "03" "011" "012" "03" "03" "03" "0412" "0411"
#> HSPC_399 HSPC_405 HSPC_411 HSPC_417 HSPC_423 HSPC_381 HSPC_388 HSPC_394 HSPC_400
#> "03" "03" "012" "012" "012" "021" "012" "021" "0412"
#> HSPC_406 HSPC_412 HSPC_418 HSPC_424 HSPC_382 HSPC_389 HSPC_395 HSPC_401 HSPC_407
#> "042" "013" "03" "0413" "012" "014" "043" "021" "013"
#> HSPC_413 HSPC_419 HSPC_425 HSPC_383 HSPC_390 HSPC_396 HSPC_402 HSPC_408 HSPC_414
#> "042" "013" "0413" "022" "042" "03" "03" "011" "021"
#> HSPC_420 HSPC_426 HSPC_384 Prog_385 Prog_391 Prog_397 Prog_403 Prog_409 Prog_415
#> "012" "042" "021" "011" "021" "011" "011" "011" "011"
#> Prog_421 Prog_379 Prog_386 Prog_392 Prog_398 Prog_404 Prog_410 Prog_416 Prog_422
#> "011" "011" "011" "012" "011" "011" "011" "011" "0413"
#> Prog_380 Prog_387 Prog_393 Prog_399 Prog_405 Prog_411 Prog_417 Prog_423 Prog_381
#> "011" "013" "011" "012" "012" "042" "0411" "0412" "011"
#> Prog_388 Prog_394 Prog_400 Prog_406 Prog_412 Prog_418 Prog_424 Prog_382 Prog_389
#> "011" "03" "021" "011" "012" "014" "011" "03" "013"
#> Prog_395 Prog_401 Prog_407 Prog_413 Prog_419 Prog_425 Prog_383 Prog_390 Prog_396
#> "011" "013" "03" "012" "011" "014" "011" "043" "014"
#> Prog_402 Prog_408 Prog_414 Prog_420 Prog_426 Prog_384 HSPC_433 HSPC_439 HSPC_445
#> "0412" "014" "013" "012" "012" "0411" "021" "021" "021"
#> HSPC_451 HSPC_457 HSPC_463 LT-HSC_109 HSPC_427 HSPC_434 HSPC_440 HSPC_446 HSPC_452
#> "023" "022" "03" "022" "023" "021" "042" "022" "021"
#> HSPC_458 HSPC_464 LT-HSC_110 HSPC_428 HSPC_435 HSPC_441 HSPC_447 HSPC_453 HSPC_459
#> "021" "021" "03" "021" "03" "03" "03" "03" "03"
#> HSPC_465 LT-HSC_111 HSPC_429 HSPC_436 HSPC_442 HSPC_448 HSPC_454 HSPC_460 HSPC_466
#> "03" "022" "021" "013" "012" "03" "013" "03" "042"
#> LT-HSC_112 HSPC_430 HSPC_437 HSPC_443 HSPC_449 HSPC_455 HSPC_461 HSPC_467 LT-HSC_113
#> "03" "03" "021" "03" "03" "022" "042" "03" "03"
#> HSPC_431 HSPC_438 HSPC_444 HSPC_450 HSPC_456 HSPC_462 HSPC_468 LT-HSC_114 HSPC_432
#> "03" "021" "022" "022" "012" "03" "03" "023" "022"
#> Prog_433 Prog_439 Prog_445 Prog_451 Prog_457 Prog_463 LT-HSC_115 Prog_427 Prog_434
#> "03" "03" "03" "013" "014" "03" "012" "022" "011"
#> Prog_440 Prog_446 Prog_452 Prog_458 Prog_464 LT-HSC_116 Prog_428 Prog_435 Prog_441
#> "043" "03" "021" "043" "03" "03" "012" "0411" "012"
#> Prog_447 Prog_453 Prog_459 Prog_465 LT-HSC_117 Prog_429 Prog_436 Prog_442 Prog_448
#> "012" "014" "03" "043" "03" "011" "012" "021" "03"
#> Prog_454 Prog_460 Prog_466 LT-HSC_118 Prog_430 Prog_437 Prog_443 Prog_449 Prog_455
#> "0412" "042" "0411" "021" "011" "013" "013" "011" "03"
#> Prog_461 Prog_467 LT-HSC_119 Prog_431 Prog_438 Prog_444 Prog_450 Prog_456 Prog_462
#> "022" "03" "021" "03" "022" "011" "012" "012" "042"
#> Prog_468 LT-HSC_120 Prog_432 HSPC_475 HSPC_481 HSPC_487 HSPC_493 HSPC_499 HSPC_505
#> "0411" "0413" "043" "022" "023" "021" "022" "022" "042"
#> LT-HSC_121 HSPC_469 HSPC_476 HSPC_482 HSPC_488 HSPC_494 HSPC_500 HSPC_506 LT-HSC_122
#> "021" "023" "021" "022" "022" "022" "022" "022" "042"
#> HSPC_470 HSPC_477 HSPC_483 HSPC_489 HSPC_495 HSPC_501 HSPC_507 LT-HSC_123 HSPC_471
#> "022" "012" "022" "042" "043" "023" "022" "022" "022"
#> HSPC_478 HSPC_484 HSPC_490 HSPC_496 HSPC_502 HSPC_508 LT-HSC_124 HSPC_472 HSPC_479
#> "022" "021" "03" "03" "03" "013" "03" "03" "03"
#> HSPC_485 HSPC_491 HSPC_497 HSPC_503 HSPC_509 LT-HSC_125 HSPC_473 HSPC_480 HSPC_486
#> "012" "0412" "022" "012" "042" "03" "03" "03" "042"
#> HSPC_492 HSPC_498 HSPC_504 HSPC_510 LT-HSC_126 HSPC_474 Prog_475 Prog_481 Prog_487
#> "03" "03" "022" "0412" "03" "03" "013" "03" "013"
#> Prog_493 Prog_499 Prog_505 LT-HSC_127 Prog_469 Prog_476 Prog_482 Prog_488 Prog_494
#> "012" "012" "013" "021" "042" "012" "012" "013" "043"
#> Prog_500 Prog_506 LT-HSC_128 Prog_470 Prog_477 Prog_483 Prog_489 Prog_495 Prog_501
#> "013" "012" "03" "012" "011" "043" "012" "03" "012"
#> Prog_507 LT-HSC_129 Prog_471 Prog_478 Prog_484 Prog_490 Prog_496 Prog_502 Prog_508
#> "0411" "021" "012" "011" "012" "043" "03" "011" "011"
#> LT-HSC_130 Prog_472 Prog_479 Prog_485 Prog_491 Prog_497 Prog_503 Prog_509 LT-HSC_131
#> "013" "043" "012" "013" "013" "0411" "043" "03" "03"
#> Prog_473 Prog_480 Prog_486 Prog_492 Prog_498 Prog_504 Prog_510 LT-HSC_132 Prog_474
#> "012" "023" "012" "03" "021" "012" "042" "014" "03"
#> HSPC_517 HSPC_523 HSPC_529 HSPC_535 HSPC_541 HSPC_547 LT-HSC_133 HSPC_511 HSPC_518
#> "023" "03" "021" "022" "022" "03" "021" "023" "022"
#> HSPC_524 HSPC_530 HSPC_536 HSPC_542 HSPC_548 LT-HSC_134 HSPC_512 HSPC_519 HSPC_525
#> "022" "022" "021" "021" "022" "023" "03" "021" "023"
#> HSPC_531 HSPC_537 HSPC_543 HSPC_549 LT-HSC_135 HSPC_513 HSPC_520 HSPC_526 HSPC_532
#> "022" "042" "042" "022" "022" "021" "042" "03" "042"
#> HSPC_538 HSPC_544 HSPC_550 LT-HSC_136 HSPC_514 HSPC_521 HSPC_527 HSPC_533 HSPC_539
#> "03" "012" "042" "023" "03" "022" "012" "03" "022"
#> HSPC_545 HSPC_551 LT-HSC_137 HSPC_515 HSPC_522 HSPC_528 HSPC_534 HSPC_540 HSPC_546
#> "022" "042" "022" "03" "022" "0413" "03" "03" "022"
#> HSPC_552 LT-HSC_138 HSPC_516 Prog_517 Prog_523 Prog_529 Prog_535 Prog_541 Prog_547
#> "042" "022" "03" "03" "011" "013" "011" "013" "013"
#> LT-HSC_139 Prog_511 Prog_518 Prog_524 Prog_530 Prog_536 Prog_542 Prog_548 LT-HSC_140
#> "03" "03" "0413" "042" "012" "011" "0413" "011" "022"
#> Prog_512 Prog_519 Prog_525 Prog_531 Prog_537 Prog_543 Prog_549 LT-HSC_141 Prog_513
#> "0411" "042" "043" "013" "022" "014" "0413" "021" "03"
#> Prog_520 Prog_526 Prog_532 Prog_538 Prog_544 Prog_550 LT-HSC_142 Prog_514 Prog_521
#> "013" "023" "022" "021" "023" "012" "012" "012" "012"
#> Prog_527 Prog_533 Prog_539 Prog_545 Prog_551 LT-HSC_143 Prog_515 Prog_522 Prog_528
#> "012" "022" "0411" "014" "012" "013" "043" "022" "014"
#> Prog_534 Prog_540 Prog_546 Prog_552 LT-HSC_144 Prog_516 HSPC_559 HSPC_565 HSPC_571
#> "043" "023" "023" "0412" "042" "011" "022" "023" "03"
#> HSPC_577 HSPC_583 HSPC_589 LT-HSC_145 HSPC_553 HSPC_560 HSPC_566 HSPC_572 HSPC_578
#> "022" "021" "022" "022" "013" "022" "022" "023" "022"
#> HSPC_584 HSPC_590 LT-HSC_146 HSPC_554 HSPC_561 HSPC_567 HSPC_573 HSPC_579 HSPC_585
#> "022" "042" "03" "022" "021" "03" "022" "03" "022"
#> HSPC_591 LT-HSC_147 HSPC_555 HSPC_562 HSPC_568 HSPC_574 HSPC_580 HSPC_586 HSPC_592
#> "023" "022" "022" "023" "022" "012" "03" "03" "03"
#> LT-HSC_148 HSPC_556 HSPC_563 HSPC_569 HSPC_575 HSPC_581 HSPC_587 HSPC_593 LT-HSC_149
#> "042" "03" "03" "0413" "03" "021" "021" "022" "022"
#> HSPC_557 HSPC_564 HSPC_570 HSPC_576 HSPC_582 HSPC_588 HSPC_594 LT-HSC_150 HSPC_558
#> "03" "021" "021" "022" "022" "021" "022" "022" "021"
#> Prog_559 Prog_565 Prog_571 Prog_577 Prog_583 Prog_589 LT-HSC_151 Prog_553 Prog_560
#> "012" "012" "012" "012" "023" "023" "03" "043" "012"
#> Prog_566 Prog_572 Prog_578 Prog_584 Prog_590 LT-HSC_152 Prog_554 Prog_561 Prog_567
#> "014" "03" "0413" "012" "012" "022" "03" "042" "012"
#> Prog_573 Prog_579 Prog_585 Prog_591 LT-HSC_153 Prog_555 Prog_562 Prog_568 Prog_574
#> "023" "012" "03" "023" "022" "03" "011" "03" "012"
#> Prog_580 Prog_586 Prog_592 LT-HSC_154 Prog_556 Prog_563 Prog_569 Prog_575 Prog_581
#> "03" "043" "011" "021" "03" "021" "013" "011" "012"
#> Prog_587 Prog_593 LT-HSC_155 Prog_557 Prog_564 Prog_570 Prog_576 Prog_582 Prog_588
#> "013" "012" "021" "012" "03" "0411" "014" "012" "03"
#> Prog_594 LT-HSC_156 Prog_558 HSPC_601 HSPC_607 HSPC_613 HSPC_619 HSPC_625 HSPC_631
#> "03" "012" "03" "042" "023" "042" "021" "022" "0412"
#> LT-HSC_157 HSPC_595 HSPC_602 HSPC_608 HSPC_614 HSPC_620 HSPC_626 HSPC_632 LT-HSC_158
#> "023" "03" "022" "022" "042" "022" "023" "021" "022"
#> HSPC_596 HSPC_603 HSPC_609 HSPC_615 HSPC_621 HSPC_627 HSPC_633 LT-HSC_159 HSPC_597
#> "042" "03" "023" "023" "021" "042" "023" "0411" "042"
#> HSPC_604 HSPC_610 HSPC_616 HSPC_622 HSPC_628 HSPC_634 LT-HSC_160 HSPC_598 HSPC_605
#> "022" "022" "021" "021" "042" "042" "023" "042" "021"
#> HSPC_611 HSPC_617 HSPC_623 HSPC_629 HSPC_635 LT-HSC_161 HSPC_599 HSPC_606 HSPC_612
#> "021" "03" "042" "042" "042" "023" "022" "03" "03"
#> HSPC_618 HSPC_624 HSPC_630 HSPC_636 LT-HSC_162 HSPC_600 Prog_601 Prog_607 Prog_613
#> "022" "03" "022" "03" "023" "023" "021" "012" "03"
#> Prog_619 Prog_625 Prog_631 LT-HSC_163 Prog_595 Prog_602 Prog_608 Prog_614 Prog_620
#> "022" "0413" "03" "022" "022" "013" "011" "013" "042"
#> Prog_626 Prog_632 LT-HSC_164 Prog_596 Prog_603 Prog_609 Prog_615 Prog_621 Prog_627
#> "012" "012" "03" "03" "011" "012" "0411" "012" "03"
#> Prog_633 LT-HSC_165 Prog_597 Prog_604 Prog_610 Prog_616 Prog_622 Prog_628 Prog_634
#> "043" "022" "03" "03" "03" "011" "012" "012" "043"
#> LT-HSC_166 Prog_598 Prog_605 Prog_611 Prog_617 Prog_623 Prog_629 Prog_635 LT-HSC_167
#> "042" "012" "014" "03" "03" "013" "012" "03" "022"
#> Prog_599 Prog_606 Prog_612 Prog_618 Prog_624 Prog_630 Prog_636 LT-HSC_168 Prog_600
#> "012" "03" "013" "012" "012" "013" "021" "013" "012"
#> HSPC_643 HSPC_649 HSPC_655 HSPC_661 HSPC_667 HSPC_673 LT-HSC_169 HSPC_637 HSPC_644
#> "042" "03" "021" "042" "022" "022" "023" "03" "013"
#> HSPC_650 HSPC_656 HSPC_662 HSPC_668 HSPC_674 LT-HSC_170 HSPC_638 HSPC_645 HSPC_651
#> "021" "022" "022" "03" "03" "042" "013" "03" "0411"
#> HSPC_657 HSPC_663 HSPC_669 HSPC_675 LT-HSC_171 HSPC_639 HSPC_646 HSPC_652 HSPC_658
#> "023" "0412" "022" "021" "042" "03" "03" "042" "0412"
#> HSPC_664 HSPC_670 HSPC_676 LT-HSC_172 HSPC_640 HSPC_647 HSPC_653 HSPC_659 HSPC_665
#> "03" "023" "022" "022" "03" "022" "021" "021" "042"
#> HSPC_671 HSPC_677 LT-HSC_173 HSPC_641 HSPC_648 HSPC_654 HSPC_660 HSPC_666 HSPC_672
#> "03" "023" "022" "03" "022" "042" "043" "0413" "03"
#> HSPC_678 LT-HSC_174 HSPC_642 Prog_643 Prog_649 Prog_655 Prog_661 Prog_667 Prog_673
#> "022" "03" "021" "0412" "011" "011" "013" "043" "042"
#> LT-HSC_175 Prog_637 Prog_644 Prog_650 Prog_656 Prog_662 Prog_668 Prog_674 LT-HSC_176
#> "021" "014" "03" "012" "03" "03" "023" "03" "022"
#> Prog_638 Prog_645 Prog_651 Prog_657 Prog_663 Prog_669 Prog_675 LT-HSC_177 Prog_639
#> "011" "043" "03" "011" "011" "023" "012" "022" "014"
#> Prog_646 Prog_652 Prog_658 Prog_664 Prog_670 Prog_676 LT-HSC_178 Prog_640 Prog_647
#> "012" "012" "012" "023" "012" "03" "021" "011" "043"
#> Prog_653 Prog_659 Prog_665 Prog_671 Prog_677 LT-HSC_179 Prog_641 Prog_648 Prog_654
#> "043" "03" "03" "03" "011" "03" "023" "042" "013"
#> Prog_660 Prog_666 Prog_672 Prog_678 LT-HSC_180 Prog_642 HSPC_685 HSPC_691 HSPC_697
#> "03" "03" "03" "0411" "043" "03" "021" "021" "0413"
#> HSPC_703 HSPC_709 HSPC_715 LT-HSC_181 HSPC_679 HSPC_686 HSPC_692 HSPC_698 HSPC_704
#> "022" "023" "021" "021" "03" "021" "023" "022" "022"
#> HSPC_710 HSPC_716 LT-HSC_182 HSPC_680 HSPC_687 HSPC_693 HSPC_699 HSPC_705 HSPC_711
#> "021" "022" "021" "022" "023" "023" "022" "012" "021"
#> HSPC_717 LT-HSC_183 HSPC_681 HSPC_688 HSPC_694 HSPC_700 HSPC_706 HSPC_712 HSPC_718
#> "0412" "03" "042" "021" "021" "0413" "03" "021" "021"
#> LT-HSC_184 HSPC_682 HSPC_689 HSPC_695 HSPC_701 HSPC_707 HSPC_713 HSPC_719 LT-HSC_185
#> "03" "012" "022" "013" "042" "042" "021" "022" "023"
#> HSPC_683 HSPC_690 HSPC_696 HSPC_702 HSPC_708 HSPC_714 HSPC_720 LT-HSC_186 HSPC_684
#> "0412" "022" "043" "022" "03" "022" "012" "021" "023"
#> Prog_685 Prog_691 Prog_697 Prog_703 Prog_709 Prog_715 LT-HSC_187 Prog_679 Prog_686
#> "012" "021" "011" "043" "014" "012" "03" "012" "0413"
#> Prog_692 Prog_698 Prog_704 Prog_710 Prog_716 LT-HSC_188 Prog_680 Prog_687 Prog_693
#> "03" "013" "03" "03" "03" "03" "012" "012" "012"
#> Prog_699 Prog_705 Prog_711 Prog_717 LT-HSC_189 Prog_681 Prog_688 Prog_694 Prog_700
#> "012" "012" "03" "012" "021" "013" "011" "03" "011"
#> Prog_706 Prog_712 Prog_718 LT-HSC_190 Prog_682 Prog_689 Prog_695 Prog_701 Prog_707
#> "013" "013" "012" "023" "013" "03" "011" "011" "03"
#> Prog_713 Prog_719 LT-HSC_191 Prog_683 Prog_690 Prog_696 Prog_702 Prog_708 Prog_714
#> "013" "011" "03" "023" "03" "0411" "014" "014" "014"
#> Prog_720 LT-HSC_192 Prog_684 HSPC_727 HSPC_733 HSPC_739 HSPC_745 HSPC_751 HSPC_757
#> "014" "012" "03" "022" "022" "023" "023" "022" "022"
#> LT-HSC_193 HSPC_721 HSPC_728 HSPC_734 HSPC_740 HSPC_746 HSPC_752 HSPC_758 LT-HSC_194
#> "022" "023" "021" "012" "022" "023" "023" "03" "022"
#> HSPC_722 HSPC_729 HSPC_735 HSPC_741 HSPC_747 HSPC_753 HSPC_759 LT-HSC_195 HSPC_723
#> "03" "03" "042" "021" "022" "03" "03" "03" "03"
#> HSPC_730 HSPC_736 HSPC_742 HSPC_748 HSPC_754 HSPC_760 LT-HSC_196 HSPC_724 HSPC_731
#> "03" "03" "03" "022" "021" "042" "021" "03" "0412"
#> HSPC_737 HSPC_743 HSPC_749 HSPC_755 HSPC_761 LT-HSC_197 HSPC_725 HSPC_732 HSPC_738
#> "012" "03" "022" "03" "03" "022" "023" "03" "022"
#> HSPC_744 HSPC_750 HSPC_756 HSPC_762 LT-HSC_198 HSPC_726 Prog_727 Prog_733 Prog_739
#> "042" "03" "022" "042" "022" "021" "012" "03" "0412"
#> Prog_745 Prog_751 Prog_757 LT-HSC_199 Prog_721 Prog_728 Prog_734 Prog_740 Prog_746
#> "03" "03" "0412" "021" "014" "03" "014" "03" "0411"
#> Prog_752 Prog_758 LT-HSC_200 Prog_722 Prog_729 Prog_735 Prog_741 Prog_747 Prog_753
#> "03" "03" "022" "014" "023" "012" "021" "03" "013"
#> Prog_759 LT-HSC_201 Prog_723 Prog_730 Prog_736 Prog_742 Prog_748 Prog_754 Prog_760
#> "012" "022" "011" "011" "013" "021" "0413" "013" "012"
#> LT-HSC_202 Prog_724 Prog_731 Prog_737 Prog_743 Prog_749 Prog_755 Prog_761 LT-HSC_203
#> "03" "03" "011" "03" "012" "043" "021" "0412" "021"
#> Prog_725 Prog_732 Prog_738 Prog_744 Prog_750 Prog_756 Prog_762 LT-HSC_204 Prog_726
#> "03" "043" "03" "03" "0413" "043" "03" "03" "03"
#> HSPC_769 HSPC_775 HSPC_781 HSPC_787 HSPC_793 HSPC_799 LT-HSC_205 HSPC_763 HSPC_770
#> "023" "023" "022" "023" "021" "023" "023" "021" "042"
#> HSPC_776 HSPC_782 HSPC_788 HSPC_794 HSPC_800 LT-HSC_206 HSPC_764 HSPC_771 HSPC_777
#> "023" "022" "023" "03" "0413" "022" "022" "03" "03"
#> HSPC_783 HSPC_789 HSPC_795 HSPC_801 LT-HSC_207 HSPC_765 HSPC_772 HSPC_778 HSPC_784
#> "022" "042" "03" "03" "042" "023" "042" "03" "03"
#> HSPC_790 HSPC_796 HSPC_802 LT-HSC_208 HSPC_766 HSPC_773 HSPC_779 HSPC_785 HSPC_791
#> "042" "012" "022" "022" "012" "03" "042" "03" "043"
#> HSPC_797 HSPC_803 LT-HSC_209 HSPC_767 HSPC_774 HSPC_780 HSPC_786 HSPC_792 HSPC_798
#> "03" "022" "021" "012" "03" "03" "03" "021" "022"
#> HSPC_804 LT-HSC_210 HSPC_768 Prog_769 Prog_775 Prog_781 Prog_787 Prog_793 Prog_799
#> "022" "022" "023" "012" "03" "012" "043" "013" "03"
#> LT-HSC_211 Prog_763 Prog_770 Prog_776 Prog_782 Prog_788 Prog_794 Prog_800 LT-HSC_212
#> "042" "012" "014" "011" "012" "011" "012" "012" "03"
#> Prog_764 Prog_771 Prog_777 Prog_783 Prog_789 Prog_795 Prog_801 LT-HSC_213 Prog_765
#> "012" "014" "012" "014" "012" "012" "013" "022" "013"
#> Prog_772 Prog_778 Prog_784 Prog_790 Prog_796 Prog_802 LT-HSC_214 Prog_766 Prog_773
#> "012" "023" "03" "011" "0412" "014" "03" "021" "021"
#> Prog_779 Prog_785 Prog_791 Prog_797 Prog_803 LT-HSC_215 Prog_767 Prog_774 Prog_780
#> "013" "03" "012" "03" "043" "03" "011" "012" "011"
#> Prog_786 Prog_792 Prog_798 Prog_804 LT-HSC_216 Prog_768 HSPC_811 HSPC_817 HSPC_823
#> "011" "013" "013" "012" "0411" "012" "021" "021" "021"
#> HSPC_829 HSPC_835 HSPC_841 HSPC_847 HSPC_805 HSPC_812 HSPC_818 HSPC_824 HSPC_830
#> "021" "03" "043" "023" "021" "012" "03" "03" "021"
#> HSPC_836 HSPC_842 HSPC_848 HSPC_806 HSPC_813 HSPC_819 HSPC_825 HSPC_831 HSPC_837
#> "023" "023" "022" "023" "012" "042" "03" "03" "0412"
#> HSPC_843 HSPC_849 HSPC_807 HSPC_814 HSPC_820 HSPC_826 HSPC_832 HSPC_838 HSPC_844
#> "03" "022" "012" "0413" "012" "03" "03" "03" "022"
#> HSPC_850 HSPC_808 HSPC_815 HSPC_821 HSPC_827 HSPC_833 HSPC_839 HSPC_845 HSPC_851
#> "021" "012" "03" "042" "022" "012" "0413" "03" "023"
#> HSPC_809 HSPC_816 HSPC_822 HSPC_828 HSPC_834 HSPC_840 HSPC_846 HSPC_852 HSPC_810
#> "022" "042" "03" "03" "03" "022" "042" "022" "022"
#> Prog_811 Prog_817 Prog_823 Prog_829 Prog_835 Prog_841 Prog_847 Prog_805 Prog_812
#> "014" "013" "03" "012" "014" "0411" "012" "042" "023"
#> Prog_818 Prog_824 Prog_830 Prog_836 Prog_842 Prog_848 Prog_806 Prog_813 Prog_819
#> "014" "012" "011" "013" "014" "022" "03" "011" "011"
#> Prog_825 Prog_831 Prog_837 Prog_843 Prog_849 Prog_807 Prog_814 Prog_820 Prog_826
#> "011" "014" "014" "013" "042" "014" "011" "013" "011"
#> Prog_832 Prog_838 Prog_844 Prog_850 Prog_808 Prog_815 Prog_821 Prog_827 Prog_833
#> "012" "011" "014" "014" "012" "014" "011" "03" "012"
#> Prog_839 Prog_845 Prog_851 Prog_809 Prog_816 Prog_822 Prog_828 Prog_834 Prog_840
#> "013" "013" "03" "013" "012" "011" "011" "012" "012"
#> Prog_846 Prog_852 Prog_810
#> "012" "0411" "013"
get_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 3418))
#> HSPC_007 HSPC_013 HSPC_019 HSPC_025 HSPC_031 HSPC_037 LT-HSC_001 HSPC_001 HSPC_008
#> "021" "023" "021" "042" "03" "042" "023" "012" "042"
#> HSPC_014 HSPC_020 HSPC_026 HSPC_032 HSPC_038 LT-HSC_002 HSPC_002 HSPC_009 HSPC_015
#> "022" "042" "041" "021" "022" "042" "022" "022" "023"
#> HSPC_021 HSPC_027 HSPC_033 HSPC_039 LT-HSC_003 HSPC_003 HSPC_010 HSPC_016 HSPC_022
#> "022" "03" "03" "021" "023" "012" "021" "012" "041"
#> HSPC_028 HSPC_034 HSPC_040 LT-HSC_004 HSPC_004 HSPC_011 HSPC_017 HSPC_023 HSPC_029
#> "03" "012" "03" "022" "03" "042" "022" "042" "021"
#> HSPC_035 HSPC_041 LT-HSC_005 HSPC_005 HSPC_012 HSPC_018 HSPC_024 HSPC_030 HSPC_036
#> "022" "042" "021" "021" "042" "042" "022" "03" "012"
#> HSPC_042 LT-HSC_006 HSPC_006 Prog_007 Prog_013 Prog_019 Prog_025 Prog_031 Prog_037
#> "03" "022" "041" "012" "012" "013" "041" "03" "03"
#> LT-HSC_007 Prog_001 Prog_008 Prog_014 Prog_020 Prog_026 Prog_032 Prog_038 LT-HSC_008
#> "042" "043" "011" "011" "014" "03" "014" "014" "03"
#> Prog_002 Prog_009 Prog_015 Prog_021 Prog_027 Prog_033 Prog_039 LT-HSC_009 Prog_003
#> "012" "011" "012" "014" "012" "011" "011" "022" "012"
#> Prog_010 Prog_016 Prog_022 Prog_028 Prog_034 Prog_040 LT-HSC_010 Prog_004 Prog_011
#> "041" "041" "041" "011" "021" "042" "041" "03" "014"
#> Prog_017 Prog_023 Prog_029 Prog_035 Prog_041 LT-HSC_011 Prog_005 Prog_012 Prog_018
#> "012" "012" "014" "011" "021" "021" "021" "022" "022"
#> Prog_024 Prog_030 Prog_036 Prog_042 LT-HSC_012 Prog_006 HSPC_049 HSPC_055 HSPC_061
#> "014" "041" "041" "041" "041" "011" "03" "042" "042"
#> HSPC_067 HSPC_073 HSPC_079 LT-HSC_013 HSPC_043 HSPC_050 HSPC_056 HSPC_062 HSPC_068
#> "042" "022" "041" "022" "042" "043" "022" "041" "022"
#> HSPC_074 HSPC_080 LT-HSC_014 HSPC_044 HSPC_051 HSPC_057 HSPC_063 HSPC_069 HSPC_075
#> "022" "03" "022" "043" "03" "022" "041" "03" "022"
#> HSPC_081 LT-HSC_015 HSPC_045 HSPC_052 HSPC_058 HSPC_064 HSPC_070 HSPC_076 HSPC_082
#> "03" "022" "042" "043" "03" "041" "03" "03" "042"
#> LT-HSC_016 HSPC_046 HSPC_053 HSPC_059 HSPC_065 HSPC_071 HSPC_077 HSPC_083 LT-HSC_017
#> "022" "03" "012" "021" "03" "041" "012" "022" "022"
#> HSPC_047 HSPC_054 HSPC_060 HSPC_066 HSPC_072 HSPC_078 HSPC_084 LT-HSC_018 HSPC_048
#> "023" "03" "03" "03" "041" "043" "042" "022" "03"
#> Prog_049 Prog_055 Prog_061 Prog_067 Prog_073 Prog_079 LT-HSC_019 Prog_043 Prog_050
#> "011" "012" "011" "014" "03" "011" "021" "013" "012"
#> Prog_056 Prog_062 Prog_068 Prog_074 Prog_080 LT-HSC_020 Prog_044 Prog_051 Prog_057
#> "012" "042" "03" "041" "043" "03" "03" "014" "013"
#> Prog_063 Prog_069 Prog_075 Prog_081 LT-HSC_021 Prog_045 Prog_052 Prog_058 Prog_064
#> "043" "012" "012" "011" "041" "013" "043" "014" "014"
#> Prog_070 Prog_076 Prog_082 LT-HSC_022 Prog_046 Prog_053 Prog_059 Prog_065 Prog_071
#> "041" "014" "011" "022" "011" "011" "012" "013" "012"
#> Prog_077 Prog_083 LT-HSC_023 Prog_047 Prog_054 Prog_060 Prog_066 Prog_072 Prog_078
#> "012" "012" "022" "012" "041" "021" "014" "03" "014"
#> Prog_084 LT-HSC_024 Prog_048 HSPC_091 HSPC_097 HSPC_103 HSPC_109 HSPC_115 HSPC_121
#> "011" "03" "03" "021" "023" "022" "043" "022" "023"
#> LT-HSC_025 HSPC_085 HSPC_092 HSPC_098 HSPC_104 HSPC_110 HSPC_116 HSPC_122 LT-HSC_026
#> "021" "042" "021" "043" "023" "043" "021" "03" "022"
#> HSPC_086 HSPC_093 HSPC_099 HSPC_105 HSPC_111 HSPC_117 HSPC_123 LT-HSC_027 HSPC_087
#> "021" "021" "042" "022" "022" "042" "022" "023" "022"
#> HSPC_094 HSPC_100 HSPC_106 HSPC_112 HSPC_118 HSPC_124 LT-HSC_028 HSPC_088 HSPC_095
#> "012" "03" "022" "021" "03" "021" "03" "03" "022"
#> HSPC_101 HSPC_107 HSPC_113 HSPC_119 HSPC_125 LT-HSC_029 HSPC_089 HSPC_096 HSPC_102
#> "012" "042" "023" "023" "03" "021" "03" "043" "012"
#> HSPC_108 HSPC_114 HSPC_120 HSPC_126 LT-HSC_030 HSPC_090 Prog_091 Prog_097 Prog_103
#> "03" "03" "03" "03" "021" "012" "011" "012" "012"
#> Prog_109 Prog_115 Prog_121 LT-HSC_031 Prog_085 Prog_092 Prog_098 Prog_104 Prog_110
#> "041" "014" "021" "03" "012" "03" "011" "021" "011"
#> Prog_116 Prog_122 LT-HSC_032 Prog_086 Prog_093 Prog_099 Prog_105 Prog_111 Prog_117
#> "012" "03" "011" "021" "012" "012" "012" "014" "013"
#> Prog_123 LT-HSC_033 Prog_087 Prog_094 Prog_100 Prog_106 Prog_112 Prog_118 Prog_124
#> "012" "03" "012" "014" "011" "03" "011" "041" "03"
#> LT-HSC_034 Prog_088 Prog_095 Prog_101 Prog_107 Prog_113 Prog_119 Prog_125 LT-HSC_035
#> "03" "043" "011" "013" "011" "012" "011" "03" "021"
#> Prog_089 Prog_096 Prog_102 Prog_108 Prog_114 Prog_120 Prog_126 LT-HSC_036 Prog_090
#> "014" "03" "03" "041" "041" "023" "014" "03" "011"
#> HSPC_133 HSPC_139 HSPC_145 HSPC_151 HSPC_157 HSPC_163 LT-HSC_037 HSPC_127 HSPC_134
#> "022" "022" "023" "042" "043" "023" "023" "041" "023"
#> HSPC_140 HSPC_146 HSPC_152 HSPC_158 HSPC_164 LT-HSC_038 HSPC_128 HSPC_135 HSPC_141
#> "023" "041" "022" "042" "022" "023" "023" "03" "022"
#> HSPC_147 HSPC_153 HSPC_159 HSPC_165 LT-HSC_039 HSPC_129 HSPC_136 HSPC_142 HSPC_148
#> "023" "022" "042" "043" "022" "021" "042" "042" "043"
#> HSPC_154 HSPC_160 HSPC_166 LT-HSC_040 HSPC_130 HSPC_137 HSPC_143 HSPC_149 HSPC_155
#> "043" "021" "042" "022" "042" "021" "022" "022" "023"
#> HSPC_161 HSPC_167 LT-HSC_041 HSPC_131 HSPC_138 HSPC_144 HSPC_150 HSPC_156 HSPC_162
#> "042" "023" "022" "022" "012" "03" "021" "012" "03"
#> HSPC_168 LT-HSC_042 HSPC_132 Prog_133 Prog_139 Prog_145 Prog_151 Prog_157 Prog_163
#> "041" "022" "013" "012" "011" "012" "03" "012" "011"
#> LT-HSC_043 Prog_127 Prog_134 Prog_140 Prog_146 Prog_152 Prog_158 Prog_164 LT-HSC_044
#> "013" "03" "043" "011" "011" "043" "011" "021" "043"
#> Prog_128 Prog_135 Prog_141 Prog_147 Prog_153 Prog_159 Prog_165 LT-HSC_045 Prog_129
#> "012" "03" "013" "021" "012" "041" "043" "041" "013"
#> Prog_136 Prog_142 Prog_148 Prog_154 Prog_160 Prog_166 LT-HSC_046 Prog_130 Prog_137
#> "013" "03" "023" "03" "022" "014" "03" "013" "012"
#> Prog_143 Prog_149 Prog_155 Prog_161 Prog_167 LT-HSC_047 Prog_131 Prog_138 Prog_144
#> "013" "041" "012" "03" "012" "021" "03" "021" "043"
#> Prog_150 Prog_156 Prog_162 Prog_168 LT-HSC_048 Prog_132 HSPC_175 HSPC_181 HSPC_187
#> "013" "021" "041" "013" "023" "013" "042" "022" "022"
#> HSPC_193 HSPC_199 HSPC_205 LT-HSC_049 HSPC_169 HSPC_176 HSPC_182 HSPC_188 HSPC_194
#> "03" "03" "022" "022" "042" "022" "023" "021" "021"
#> HSPC_200 HSPC_206 LT-HSC_050 HSPC_170 HSPC_177 HSPC_183 HSPC_189 HSPC_195 HSPC_201
#> "022" "012" "022" "023" "022" "03" "03" "012" "021"
#> HSPC_207 LT-HSC_051 HSPC_171 HSPC_178 HSPC_184 HSPC_190 HSPC_196 HSPC_202 HSPC_208
#> "03" "022" "022" "03" "021" "041" "042" "03" "022"
#> LT-HSC_052 HSPC_172 HSPC_179 HSPC_185 HSPC_191 HSPC_197 HSPC_203 HSPC_209 LT-HSC_053
#> "012" "012" "012" "023" "022" "021" "042" "021" "021"
#> HSPC_173 HSPC_180 HSPC_186 HSPC_192 HSPC_198 HSPC_204 HSPC_210 LT-HSC_054 HSPC_174
#> "023" "043" "03" "022" "03" "041" "043" "022" "03"
#> Prog_175 Prog_181 Prog_187 Prog_193 Prog_199 Prog_205 LT-HSC_055 Prog_169 Prog_176
#> "041" "021" "03" "042" "03" "041" "013" "021" "012"
#> Prog_182 Prog_188 Prog_194 Prog_200 Prog_206 LT-HSC_056 Prog_170 Prog_177 Prog_183
#> "043" "014" "023" "043" "012" "013" "011" "042" "013"
#> Prog_189 Prog_195 Prog_201 Prog_207 LT-HSC_057 Prog_171 Prog_178 Prog_184 Prog_190
#> "012" "042" "041" "014" "03" "042" "011" "013" "012"
#> Prog_196 Prog_202 Prog_208 LT-HSC_058 Prog_172 Prog_179 Prog_185 Prog_191 Prog_197
#> "011" "021" "03" "03" "014" "013" "011" "03" "013"
#> Prog_203 Prog_209 LT-HSC_059 Prog_173 Prog_180 Prog_186 Prog_192 Prog_198 Prog_204
#> "013" "013" "021" "043" "03" "012" "012" "021" "023"
#> Prog_210 LT-HSC_060 Prog_174 HSPC_217 HSPC_223 HSPC_229 HSPC_235 HSPC_241 HSPC_247
#> "03" "013" "021" "021" "022" "023" "022" "021" "023"
#> LT-HSC_061 HSPC_211 HSPC_218 HSPC_224 HSPC_230 HSPC_236 HSPC_242 HSPC_248 LT-HSC_062
#> "021" "042" "022" "022" "042" "043" "023" "022" "023"
#> HSPC_212 HSPC_219 HSPC_225 HSPC_231 HSPC_237 HSPC_243 HSPC_249 LT-HSC_063 HSPC_213
#> "023" "042" "022" "023" "022" "041" "022" "03" "041"
#> HSPC_220 HSPC_226 HSPC_232 HSPC_238 HSPC_244 HSPC_250 LT-HSC_064 HSPC_214 HSPC_221
#> "022" "021" "023" "021" "03" "041" "011" "012" "03"
#> HSPC_227 HSPC_233 HSPC_239 HSPC_245 HSPC_251 LT-HSC_065 HSPC_215 HSPC_222 HSPC_228
#> "022" "042" "022" "022" "041" "03" "041" "042" "023"
#> HSPC_234 HSPC_240 HSPC_246 HSPC_252 LT-HSC_066 HSPC_216 Prog_217 Prog_223 Prog_229
#> "021" "03" "022" "021" "03" "012" "011" "042" "011"
#> Prog_235 Prog_241 Prog_247 LT-HSC_067 Prog_211 Prog_218 Prog_224 Prog_230 Prog_236
#> "023" "022" "03" "021" "011" "012" "013" "041" "012"
#> Prog_242 Prog_248 LT-HSC_068 Prog_212 Prog_219 Prog_225 Prog_231 Prog_237 Prog_243
#> "014" "043" "012" "014" "021" "03" "013" "042" "013"
#> Prog_249 LT-HSC_069 Prog_213 Prog_220 Prog_226 Prog_232 Prog_238 Prog_244 Prog_250
#> "011" "03" "043" "021" "03" "03" "012" "03" "014"
#> LT-HSC_070 Prog_214 Prog_221 Prog_227 Prog_233 Prog_239 Prog_245 Prog_251 LT-HSC_071
#> "043" "041" "011" "013" "012" "011" "012" "021" "03"
#> Prog_215 Prog_222 Prog_228 Prog_234 Prog_240 Prog_246 Prog_252 LT-HSC_072 Prog_216
#> "011" "03" "013" "012" "012" "03" "03" "012" "011"
#> HSPC_259 HSPC_265 HSPC_271 HSPC_277 HSPC_283 HSPC_289 LT-HSC_073 HSPC_253 HSPC_260
#> "023" "022" "041" "023" "022" "022" "023" "041" "021"
#> HSPC_266 HSPC_272 HSPC_278 HSPC_284 HSPC_290 LT-HSC_074 HSPC_254 HSPC_261 HSPC_267
#> "022" "021" "042" "021" "041" "022" "022" "013" "03"
#> HSPC_273 HSPC_279 HSPC_285 HSPC_291 LT-HSC_075 HSPC_255 HSPC_262 HSPC_268 HSPC_274
#> "021" "043" "012" "03" "03" "03" "021" "012" "022"
#> HSPC_280 HSPC_286 HSPC_292 LT-HSC_076 HSPC_256 HSPC_263 HSPC_269 HSPC_275 HSPC_281
#> "041" "042" "041" "042" "011" "041" "013" "013" "023"
#> HSPC_287 HSPC_293 LT-HSC_077 HSPC_257 HSPC_264 HSPC_270 HSPC_276 HSPC_282 HSPC_288
#> "041" "041" "023" "041" "022" "03" "03" "012" "012"
#> HSPC_294 LT-HSC_078 HSPC_258 Prog_259 Prog_265 Prog_271 Prog_277 Prog_283 Prog_289
#> "041" "022" "012" "03" "011" "03" "03" "042" "041"
#> LT-HSC_079 Prog_253 Prog_260 Prog_266 Prog_272 Prog_278 Prog_284 Prog_290 LT-HSC_080
#> "021" "014" "012" "012" "012" "011" "014" "011" "03"
#> Prog_254 Prog_261 Prog_267 Prog_273 Prog_279 Prog_285 Prog_291 LT-HSC_081 Prog_255
#> "011" "014" "013" "013" "011" "014" "041" "012" "012"
#> Prog_262 Prog_268 Prog_274 Prog_280 Prog_286 Prog_292 LT-HSC_082 Prog_256 Prog_263
#> "012" "012" "014" "03" "011" "012" "03" "042" "013"
#> Prog_269 Prog_275 Prog_281 Prog_287 Prog_293 LT-HSC_083 Prog_257 Prog_264 Prog_270
#> "011" "012" "014" "013" "03" "021" "021" "023" "013"
#> Prog_276 Prog_282 Prog_288 Prog_294 LT-HSC_084 Prog_258 HSPC_301 HSPC_307 HSPC_313
#> "012" "011" "011" "012" "03" "013" "023" "022" "042"
#> HSPC_319 HSPC_325 HSPC_331 LT-HSC_085 HSPC_295 HSPC_302 HSPC_308 HSPC_314 HSPC_320
#> "021" "022" "022" "022" "041" "023" "043" "042" "043"
#> HSPC_326 HSPC_332 LT-HSC_086 HSPC_296 HSPC_303 HSPC_309 HSPC_315 HSPC_321 HSPC_327
#> "022" "012" "042" "022" "012" "022" "022" "042" "012"
#> HSPC_333 LT-HSC_087 HSPC_297 HSPC_304 HSPC_310 HSPC_316 HSPC_322 HSPC_328 HSPC_334
#> "012" "021" "022" "03" "022" "023" "03" "042" "022"
#> LT-HSC_088 HSPC_298 HSPC_305 HSPC_311 HSPC_317 HSPC_323 HSPC_329 HSPC_335 LT-HSC_089
#> "043" "03" "041" "021" "023" "03" "042" "022" "022"
#> HSPC_299 HSPC_306 HSPC_312 HSPC_318 HSPC_324 HSPC_330 HSPC_336 LT-HSC_090 HSPC_300
#> "03" "03" "041" "022" "03" "03" "022" "03" "012"
#> Prog_301 Prog_307 Prog_313 Prog_319 Prog_325 Prog_331 LT-HSC_091 Prog_295 Prog_302
#> "041" "041" "041" "013" "012" "012" "011" "041" "021"
#> Prog_308 Prog_314 Prog_320 Prog_326 Prog_332 LT-HSC_092 Prog_296 Prog_303 Prog_309
#> "012" "03" "012" "011" "012" "021" "012" "022" "022"
#> Prog_315 Prog_321 Prog_327 Prog_333 LT-HSC_093 Prog_297 Prog_304 Prog_310 Prog_316
#> "041" "041" "012" "043" "042" "043" "012" "041" "041"
#> Prog_322 Prog_328 Prog_334 LT-HSC_094 Prog_298 Prog_305 Prog_311 Prog_317 Prog_323
#> "043" "041" "014" "042" "014" "041" "043" "021" "041"
#> Prog_329 Prog_335 LT-HSC_095 Prog_299 Prog_306 Prog_312 Prog_318 Prog_324 Prog_330
#> "041" "041" "011" "011" "022" "011" "011" "011" "013"
#> Prog_336 LT-HSC_096 Prog_300 HSPC_343 HSPC_349 HSPC_355 HSPC_361 HSPC_367 HSPC_373
#> "013" "012" "013" "013" "03" "021" "023" "022" "023"
#> LT-HSC_097 HSPC_337 HSPC_344 HSPC_350 HSPC_356 HSPC_362 HSPC_368 HSPC_374 LT-HSC_098
#> "021" "022" "041" "022" "043" "041" "042" "03" "011"
#> HSPC_338 HSPC_345 HSPC_351 HSPC_357 HSPC_363 HSPC_369 HSPC_375 LT-HSC_099 HSPC_339
#> "011" "043" "043" "021" "022" "021" "021" "023" "03"
#> HSPC_346 HSPC_352 HSPC_358 HSPC_364 HSPC_370 HSPC_376 LT-HSC_100 HSPC_340 HSPC_347
#> "012" "041" "042" "042" "013" "042" "011" "021" "021"
#> HSPC_353 HSPC_359 HSPC_365 HSPC_371 HSPC_377 LT-HSC_101 HSPC_341 HSPC_348 HSPC_354
#> "012" "03" "023" "012" "041" "041" "012" "03" "022"
#> HSPC_360 HSPC_366 HSPC_372 HSPC_378 LT-HSC_102 HSPC_342 Prog_343 Prog_349 Prog_355
#> "042" "021" "042" "021" "011" "013" "013" "041" "041"
#> Prog_361 Prog_367 Prog_373 LT-HSC_103 Prog_337 Prog_344 Prog_350 Prog_356 Prog_362
#> "014" "013" "011" "013" "011" "021" "014" "011" "041"
#> Prog_368 Prog_374 LT-HSC_104 Prog_338 Prog_345 Prog_351 Prog_357 Prog_363 Prog_369
#> "014" "014" "021" "012" "041" "014" "011" "014" "041"
#> Prog_375 LT-HSC_105 Prog_339 Prog_346 Prog_352 Prog_358 Prog_364 Prog_370 Prog_376
#> "011" "041" "011" "014" "011" "03" "011" "041" "011"
#> LT-HSC_106 Prog_340 Prog_347 Prog_353 Prog_359 Prog_365 Prog_371 Prog_377 LT-HSC_107
#> "041" "014" "021" "013" "011" "021" "012" "011" "023"
#> Prog_341 Prog_348 Prog_354 Prog_360 Prog_366 Prog_372 Prog_378 LT-HSC_108 Prog_342
#> "012" "021" "041" "011" "014" "011" "03" "012" "011"
#> HSPC_385 HSPC_391 HSPC_397 HSPC_403 HSPC_409 HSPC_415 HSPC_421 HSPC_379 HSPC_386
#> "021" "03" "021" "042" "023" "023" "043" "021" "042"
#> HSPC_392 HSPC_398 HSPC_404 HSPC_410 HSPC_416 HSPC_422 HSPC_380 HSPC_387 HSPC_393
#> "03" "03" "011" "012" "03" "03" "03" "041" "041"
#> HSPC_399 HSPC_405 HSPC_411 HSPC_417 HSPC_423 HSPC_381 HSPC_388 HSPC_394 HSPC_400
#> "03" "03" "012" "012" "012" "021" "012" "021" "041"
#> HSPC_406 HSPC_412 HSPC_418 HSPC_424 HSPC_382 HSPC_389 HSPC_395 HSPC_401 HSPC_407
#> "042" "013" "03" "041" "012" "014" "043" "021" "013"
#> HSPC_413 HSPC_419 HSPC_425 HSPC_383 HSPC_390 HSPC_396 HSPC_402 HSPC_408 HSPC_414
#> "042" "013" "041" "022" "042" "03" "03" "011" "021"
#> HSPC_420 HSPC_426 HSPC_384 Prog_385 Prog_391 Prog_397 Prog_403 Prog_409 Prog_415
#> "012" "042" "021" "011" "021" "011" "011" "011" "011"
#> Prog_421 Prog_379 Prog_386 Prog_392 Prog_398 Prog_404 Prog_410 Prog_416 Prog_422
#> "011" "011" "011" "012" "011" "011" "011" "011" "041"
#> Prog_380 Prog_387 Prog_393 Prog_399 Prog_405 Prog_411 Prog_417 Prog_423 Prog_381
#> "011" "013" "011" "012" "012" "042" "041" "041" "011"
#> Prog_388 Prog_394 Prog_400 Prog_406 Prog_412 Prog_418 Prog_424 Prog_382 Prog_389
#> "011" "03" "021" "011" "012" "014" "011" "03" "013"
#> Prog_395 Prog_401 Prog_407 Prog_413 Prog_419 Prog_425 Prog_383 Prog_390 Prog_396
#> "011" "013" "03" "012" "011" "014" "011" "043" "014"
#> Prog_402 Prog_408 Prog_414 Prog_420 Prog_426 Prog_384 HSPC_433 HSPC_439 HSPC_445
#> "041" "014" "013" "012" "012" "041" "021" "021" "021"
#> HSPC_451 HSPC_457 HSPC_463 LT-HSC_109 HSPC_427 HSPC_434 HSPC_440 HSPC_446 HSPC_452
#> "023" "022" "03" "022" "023" "021" "042" "022" "021"
#> HSPC_458 HSPC_464 LT-HSC_110 HSPC_428 HSPC_435 HSPC_441 HSPC_447 HSPC_453 HSPC_459
#> "021" "021" "03" "021" "03" "03" "03" "03" "03"
#> HSPC_465 LT-HSC_111 HSPC_429 HSPC_436 HSPC_442 HSPC_448 HSPC_454 HSPC_460 HSPC_466
#> "03" "022" "021" "013" "012" "03" "013" "03" "042"
#> LT-HSC_112 HSPC_430 HSPC_437 HSPC_443 HSPC_449 HSPC_455 HSPC_461 HSPC_467 LT-HSC_113
#> "03" "03" "021" "03" "03" "022" "042" "03" "03"
#> HSPC_431 HSPC_438 HSPC_444 HSPC_450 HSPC_456 HSPC_462 HSPC_468 LT-HSC_114 HSPC_432
#> "03" "021" "022" "022" "012" "03" "03" "023" "022"
#> Prog_433 Prog_439 Prog_445 Prog_451 Prog_457 Prog_463 LT-HSC_115 Prog_427 Prog_434
#> "03" "03" "03" "013" "014" "03" "012" "022" "011"
#> Prog_440 Prog_446 Prog_452 Prog_458 Prog_464 LT-HSC_116 Prog_428 Prog_435 Prog_441
#> "043" "03" "021" "043" "03" "03" "012" "041" "012"
#> Prog_447 Prog_453 Prog_459 Prog_465 LT-HSC_117 Prog_429 Prog_436 Prog_442 Prog_448
#> "012" "014" "03" "043" "03" "011" "012" "021" "03"
#> Prog_454 Prog_460 Prog_466 LT-HSC_118 Prog_430 Prog_437 Prog_443 Prog_449 Prog_455
#> "041" "042" "041" "021" "011" "013" "013" "011" "03"
#> Prog_461 Prog_467 LT-HSC_119 Prog_431 Prog_438 Prog_444 Prog_450 Prog_456 Prog_462
#> "022" "03" "021" "03" "022" "011" "012" "012" "042"
#> Prog_468 LT-HSC_120 Prog_432 HSPC_475 HSPC_481 HSPC_487 HSPC_493 HSPC_499 HSPC_505
#> "041" "041" "043" "022" "023" "021" "022" "022" "042"
#> LT-HSC_121 HSPC_469 HSPC_476 HSPC_482 HSPC_488 HSPC_494 HSPC_500 HSPC_506 LT-HSC_122
#> "021" "023" "021" "022" "022" "022" "022" "022" "042"
#> HSPC_470 HSPC_477 HSPC_483 HSPC_489 HSPC_495 HSPC_501 HSPC_507 LT-HSC_123 HSPC_471
#> "022" "012" "022" "042" "043" "023" "022" "022" "022"
#> HSPC_478 HSPC_484 HSPC_490 HSPC_496 HSPC_502 HSPC_508 LT-HSC_124 HSPC_472 HSPC_479
#> "022" "021" "03" "03" "03" "013" "03" "03" "03"
#> HSPC_485 HSPC_491 HSPC_497 HSPC_503 HSPC_509 LT-HSC_125 HSPC_473 HSPC_480 HSPC_486
#> "012" "041" "022" "012" "042" "03" "03" "03" "042"
#> HSPC_492 HSPC_498 HSPC_504 HSPC_510 LT-HSC_126 HSPC_474 Prog_475 Prog_481 Prog_487
#> "03" "03" "022" "041" "03" "03" "013" "03" "013"
#> Prog_493 Prog_499 Prog_505 LT-HSC_127 Prog_469 Prog_476 Prog_482 Prog_488 Prog_494
#> "012" "012" "013" "021" "042" "012" "012" "013" "043"
#> Prog_500 Prog_506 LT-HSC_128 Prog_470 Prog_477 Prog_483 Prog_489 Prog_495 Prog_501
#> "013" "012" "03" "012" "011" "043" "012" "03" "012"
#> Prog_507 LT-HSC_129 Prog_471 Prog_478 Prog_484 Prog_490 Prog_496 Prog_502 Prog_508
#> "041" "021" "012" "011" "012" "043" "03" "011" "011"
#> LT-HSC_130 Prog_472 Prog_479 Prog_485 Prog_491 Prog_497 Prog_503 Prog_509 LT-HSC_131
#> "013" "043" "012" "013" "013" "041" "043" "03" "03"
#> Prog_473 Prog_480 Prog_486 Prog_492 Prog_498 Prog_504 Prog_510 LT-HSC_132 Prog_474
#> "012" "023" "012" "03" "021" "012" "042" "014" "03"
#> HSPC_517 HSPC_523 HSPC_529 HSPC_535 HSPC_541 HSPC_547 LT-HSC_133 HSPC_511 HSPC_518
#> "023" "03" "021" "022" "022" "03" "021" "023" "022"
#> HSPC_524 HSPC_530 HSPC_536 HSPC_542 HSPC_548 LT-HSC_134 HSPC_512 HSPC_519 HSPC_525
#> "022" "022" "021" "021" "022" "023" "03" "021" "023"
#> HSPC_531 HSPC_537 HSPC_543 HSPC_549 LT-HSC_135 HSPC_513 HSPC_520 HSPC_526 HSPC_532
#> "022" "042" "042" "022" "022" "021" "042" "03" "042"
#> HSPC_538 HSPC_544 HSPC_550 LT-HSC_136 HSPC_514 HSPC_521 HSPC_527 HSPC_533 HSPC_539
#> "03" "012" "042" "023" "03" "022" "012" "03" "022"
#> HSPC_545 HSPC_551 LT-HSC_137 HSPC_515 HSPC_522 HSPC_528 HSPC_534 HSPC_540 HSPC_546
#> "022" "042" "022" "03" "022" "041" "03" "03" "022"
#> HSPC_552 LT-HSC_138 HSPC_516 Prog_517 Prog_523 Prog_529 Prog_535 Prog_541 Prog_547
#> "042" "022" "03" "03" "011" "013" "011" "013" "013"
#> LT-HSC_139 Prog_511 Prog_518 Prog_524 Prog_530 Prog_536 Prog_542 Prog_548 LT-HSC_140
#> "03" "03" "041" "042" "012" "011" "041" "011" "022"
#> Prog_512 Prog_519 Prog_525 Prog_531 Prog_537 Prog_543 Prog_549 LT-HSC_141 Prog_513
#> "041" "042" "043" "013" "022" "014" "041" "021" "03"
#> Prog_520 Prog_526 Prog_532 Prog_538 Prog_544 Prog_550 LT-HSC_142 Prog_514 Prog_521
#> "013" "023" "022" "021" "023" "012" "012" "012" "012"
#> Prog_527 Prog_533 Prog_539 Prog_545 Prog_551 LT-HSC_143 Prog_515 Prog_522 Prog_528
#> "012" "022" "041" "014" "012" "013" "043" "022" "014"
#> Prog_534 Prog_540 Prog_546 Prog_552 LT-HSC_144 Prog_516 HSPC_559 HSPC_565 HSPC_571
#> "043" "023" "023" "041" "042" "011" "022" "023" "03"
#> HSPC_577 HSPC_583 HSPC_589 LT-HSC_145 HSPC_553 HSPC_560 HSPC_566 HSPC_572 HSPC_578
#> "022" "021" "022" "022" "013" "022" "022" "023" "022"
#> HSPC_584 HSPC_590 LT-HSC_146 HSPC_554 HSPC_561 HSPC_567 HSPC_573 HSPC_579 HSPC_585
#> "022" "042" "03" "022" "021" "03" "022" "03" "022"
#> HSPC_591 LT-HSC_147 HSPC_555 HSPC_562 HSPC_568 HSPC_574 HSPC_580 HSPC_586 HSPC_592
#> "023" "022" "022" "023" "022" "012" "03" "03" "03"
#> LT-HSC_148 HSPC_556 HSPC_563 HSPC_569 HSPC_575 HSPC_581 HSPC_587 HSPC_593 LT-HSC_149
#> "042" "03" "03" "041" "03" "021" "021" "022" "022"
#> HSPC_557 HSPC_564 HSPC_570 HSPC_576 HSPC_582 HSPC_588 HSPC_594 LT-HSC_150 HSPC_558
#> "03" "021" "021" "022" "022" "021" "022" "022" "021"
#> Prog_559 Prog_565 Prog_571 Prog_577 Prog_583 Prog_589 LT-HSC_151 Prog_553 Prog_560
#> "012" "012" "012" "012" "023" "023" "03" "043" "012"
#> Prog_566 Prog_572 Prog_578 Prog_584 Prog_590 LT-HSC_152 Prog_554 Prog_561 Prog_567
#> "014" "03" "041" "012" "012" "022" "03" "042" "012"
#> Prog_573 Prog_579 Prog_585 Prog_591 LT-HSC_153 Prog_555 Prog_562 Prog_568 Prog_574
#> "023" "012" "03" "023" "022" "03" "011" "03" "012"
#> Prog_580 Prog_586 Prog_592 LT-HSC_154 Prog_556 Prog_563 Prog_569 Prog_575 Prog_581
#> "03" "043" "011" "021" "03" "021" "013" "011" "012"
#> Prog_587 Prog_593 LT-HSC_155 Prog_557 Prog_564 Prog_570 Prog_576 Prog_582 Prog_588
#> "013" "012" "021" "012" "03" "041" "014" "012" "03"
#> Prog_594 LT-HSC_156 Prog_558 HSPC_601 HSPC_607 HSPC_613 HSPC_619 HSPC_625 HSPC_631
#> "03" "012" "03" "042" "023" "042" "021" "022" "041"
#> LT-HSC_157 HSPC_595 HSPC_602 HSPC_608 HSPC_614 HSPC_620 HSPC_626 HSPC_632 LT-HSC_158
#> "023" "03" "022" "022" "042" "022" "023" "021" "022"
#> HSPC_596 HSPC_603 HSPC_609 HSPC_615 HSPC_621 HSPC_627 HSPC_633 LT-HSC_159 HSPC_597
#> "042" "03" "023" "023" "021" "042" "023" "041" "042"
#> HSPC_604 HSPC_610 HSPC_616 HSPC_622 HSPC_628 HSPC_634 LT-HSC_160 HSPC_598 HSPC_605
#> "022" "022" "021" "021" "042" "042" "023" "042" "021"
#> HSPC_611 HSPC_617 HSPC_623 HSPC_629 HSPC_635 LT-HSC_161 HSPC_599 HSPC_606 HSPC_612
#> "021" "03" "042" "042" "042" "023" "022" "03" "03"
#> HSPC_618 HSPC_624 HSPC_630 HSPC_636 LT-HSC_162 HSPC_600 Prog_601 Prog_607 Prog_613
#> "022" "03" "022" "03" "023" "023" "021" "012" "03"
#> Prog_619 Prog_625 Prog_631 LT-HSC_163 Prog_595 Prog_602 Prog_608 Prog_614 Prog_620
#> "022" "041" "03" "022" "022" "013" "011" "013" "042"
#> Prog_626 Prog_632 LT-HSC_164 Prog_596 Prog_603 Prog_609 Prog_615 Prog_621 Prog_627
#> "012" "012" "03" "03" "011" "012" "041" "012" "03"
#> Prog_633 LT-HSC_165 Prog_597 Prog_604 Prog_610 Prog_616 Prog_622 Prog_628 Prog_634
#> "043" "022" "03" "03" "03" "011" "012" "012" "043"
#> LT-HSC_166 Prog_598 Prog_605 Prog_611 Prog_617 Prog_623 Prog_629 Prog_635 LT-HSC_167
#> "042" "012" "014" "03" "03" "013" "012" "03" "022"
#> Prog_599 Prog_606 Prog_612 Prog_618 Prog_624 Prog_630 Prog_636 LT-HSC_168 Prog_600
#> "012" "03" "013" "012" "012" "013" "021" "013" "012"
#> HSPC_643 HSPC_649 HSPC_655 HSPC_661 HSPC_667 HSPC_673 LT-HSC_169 HSPC_637 HSPC_644
#> "042" "03" "021" "042" "022" "022" "023" "03" "013"
#> HSPC_650 HSPC_656 HSPC_662 HSPC_668 HSPC_674 LT-HSC_170 HSPC_638 HSPC_645 HSPC_651
#> "021" "022" "022" "03" "03" "042" "013" "03" "041"
#> HSPC_657 HSPC_663 HSPC_669 HSPC_675 LT-HSC_171 HSPC_639 HSPC_646 HSPC_652 HSPC_658
#> "023" "041" "022" "021" "042" "03" "03" "042" "041"
#> HSPC_664 HSPC_670 HSPC_676 LT-HSC_172 HSPC_640 HSPC_647 HSPC_653 HSPC_659 HSPC_665
#> "03" "023" "022" "022" "03" "022" "021" "021" "042"
#> HSPC_671 HSPC_677 LT-HSC_173 HSPC_641 HSPC_648 HSPC_654 HSPC_660 HSPC_666 HSPC_672
#> "03" "023" "022" "03" "022" "042" "043" "041" "03"
#> HSPC_678 LT-HSC_174 HSPC_642 Prog_643 Prog_649 Prog_655 Prog_661 Prog_667 Prog_673
#> "022" "03" "021" "041" "011" "011" "013" "043" "042"
#> LT-HSC_175 Prog_637 Prog_644 Prog_650 Prog_656 Prog_662 Prog_668 Prog_674 LT-HSC_176
#> "021" "014" "03" "012" "03" "03" "023" "03" "022"
#> Prog_638 Prog_645 Prog_651 Prog_657 Prog_663 Prog_669 Prog_675 LT-HSC_177 Prog_639
#> "011" "043" "03" "011" "011" "023" "012" "022" "014"
#> Prog_646 Prog_652 Prog_658 Prog_664 Prog_670 Prog_676 LT-HSC_178 Prog_640 Prog_647
#> "012" "012" "012" "023" "012" "03" "021" "011" "043"
#> Prog_653 Prog_659 Prog_665 Prog_671 Prog_677 LT-HSC_179 Prog_641 Prog_648 Prog_654
#> "043" "03" "03" "03" "011" "03" "023" "042" "013"
#> Prog_660 Prog_666 Prog_672 Prog_678 LT-HSC_180 Prog_642 HSPC_685 HSPC_691 HSPC_697
#> "03" "03" "03" "041" "043" "03" "021" "021" "041"
#> HSPC_703 HSPC_709 HSPC_715 LT-HSC_181 HSPC_679 HSPC_686 HSPC_692 HSPC_698 HSPC_704
#> "022" "023" "021" "021" "03" "021" "023" "022" "022"
#> HSPC_710 HSPC_716 LT-HSC_182 HSPC_680 HSPC_687 HSPC_693 HSPC_699 HSPC_705 HSPC_711
#> "021" "022" "021" "022" "023" "023" "022" "012" "021"
#> HSPC_717 LT-HSC_183 HSPC_681 HSPC_688 HSPC_694 HSPC_700 HSPC_706 HSPC_712 HSPC_718
#> "041" "03" "042" "021" "021" "041" "03" "021" "021"
#> LT-HSC_184 HSPC_682 HSPC_689 HSPC_695 HSPC_701 HSPC_707 HSPC_713 HSPC_719 LT-HSC_185
#> "03" "012" "022" "013" "042" "042" "021" "022" "023"
#> HSPC_683 HSPC_690 HSPC_696 HSPC_702 HSPC_708 HSPC_714 HSPC_720 LT-HSC_186 HSPC_684
#> "041" "022" "043" "022" "03" "022" "012" "021" "023"
#> Prog_685 Prog_691 Prog_697 Prog_703 Prog_709 Prog_715 LT-HSC_187 Prog_679 Prog_686
#> "012" "021" "011" "043" "014" "012" "03" "012" "041"
#> Prog_692 Prog_698 Prog_704 Prog_710 Prog_716 LT-HSC_188 Prog_680 Prog_687 Prog_693
#> "03" "013" "03" "03" "03" "03" "012" "012" "012"
#> Prog_699 Prog_705 Prog_711 Prog_717 LT-HSC_189 Prog_681 Prog_688 Prog_694 Prog_700
#> "012" "012" "03" "012" "021" "013" "011" "03" "011"
#> Prog_706 Prog_712 Prog_718 LT-HSC_190 Prog_682 Prog_689 Prog_695 Prog_701 Prog_707
#> "013" "013" "012" "023" "013" "03" "011" "011" "03"
#> Prog_713 Prog_719 LT-HSC_191 Prog_683 Prog_690 Prog_696 Prog_702 Prog_708 Prog_714
#> "013" "011" "03" "023" "03" "041" "014" "014" "014"
#> Prog_720 LT-HSC_192 Prog_684 HSPC_727 HSPC_733 HSPC_739 HSPC_745 HSPC_751 HSPC_757
#> "014" "012" "03" "022" "022" "023" "023" "022" "022"
#> LT-HSC_193 HSPC_721 HSPC_728 HSPC_734 HSPC_740 HSPC_746 HSPC_752 HSPC_758 LT-HSC_194
#> "022" "023" "021" "012" "022" "023" "023" "03" "022"
#> HSPC_722 HSPC_729 HSPC_735 HSPC_741 HSPC_747 HSPC_753 HSPC_759 LT-HSC_195 HSPC_723
#> "03" "03" "042" "021" "022" "03" "03" "03" "03"
#> HSPC_730 HSPC_736 HSPC_742 HSPC_748 HSPC_754 HSPC_760 LT-HSC_196 HSPC_724 HSPC_731
#> "03" "03" "03" "022" "021" "042" "021" "03" "041"
#> HSPC_737 HSPC_743 HSPC_749 HSPC_755 HSPC_761 LT-HSC_197 HSPC_725 HSPC_732 HSPC_738
#> "012" "03" "022" "03" "03" "022" "023" "03" "022"
#> HSPC_744 HSPC_750 HSPC_756 HSPC_762 LT-HSC_198 HSPC_726 Prog_727 Prog_733 Prog_739
#> "042" "03" "022" "042" "022" "021" "012" "03" "041"
#> Prog_745 Prog_751 Prog_757 LT-HSC_199 Prog_721 Prog_728 Prog_734 Prog_740 Prog_746
#> "03" "03" "041" "021" "014" "03" "014" "03" "041"
#> Prog_752 Prog_758 LT-HSC_200 Prog_722 Prog_729 Prog_735 Prog_741 Prog_747 Prog_753
#> "03" "03" "022" "014" "023" "012" "021" "03" "013"
#> Prog_759 LT-HSC_201 Prog_723 Prog_730 Prog_736 Prog_742 Prog_748 Prog_754 Prog_760
#> "012" "022" "011" "011" "013" "021" "041" "013" "012"
#> LT-HSC_202 Prog_724 Prog_731 Prog_737 Prog_743 Prog_749 Prog_755 Prog_761 LT-HSC_203
#> "03" "03" "011" "03" "012" "043" "021" "041" "021"
#> Prog_725 Prog_732 Prog_738 Prog_744 Prog_750 Prog_756 Prog_762 LT-HSC_204 Prog_726
#> "03" "043" "03" "03" "041" "043" "03" "03" "03"
#> HSPC_769 HSPC_775 HSPC_781 HSPC_787 HSPC_793 HSPC_799 LT-HSC_205 HSPC_763 HSPC_770
#> "023" "023" "022" "023" "021" "023" "023" "021" "042"
#> HSPC_776 HSPC_782 HSPC_788 HSPC_794 HSPC_800 LT-HSC_206 HSPC_764 HSPC_771 HSPC_777
#> "023" "022" "023" "03" "041" "022" "022" "03" "03"
#> HSPC_783 HSPC_789 HSPC_795 HSPC_801 LT-HSC_207 HSPC_765 HSPC_772 HSPC_778 HSPC_784
#> "022" "042" "03" "03" "042" "023" "042" "03" "03"
#> HSPC_790 HSPC_796 HSPC_802 LT-HSC_208 HSPC_766 HSPC_773 HSPC_779 HSPC_785 HSPC_791
#> "042" "012" "022" "022" "012" "03" "042" "03" "043"
#> HSPC_797 HSPC_803 LT-HSC_209 HSPC_767 HSPC_774 HSPC_780 HSPC_786 HSPC_792 HSPC_798
#> "03" "022" "021" "012" "03" "03" "03" "021" "022"
#> HSPC_804 LT-HSC_210 HSPC_768 Prog_769 Prog_775 Prog_781 Prog_787 Prog_793 Prog_799
#> "022" "022" "023" "012" "03" "012" "043" "013" "03"
#> LT-HSC_211 Prog_763 Prog_770 Prog_776 Prog_782 Prog_788 Prog_794 Prog_800 LT-HSC_212
#> "042" "012" "014" "011" "012" "011" "012" "012" "03"
#> Prog_764 Prog_771 Prog_777 Prog_783 Prog_789 Prog_795 Prog_801 LT-HSC_213 Prog_765
#> "012" "014" "012" "014" "012" "012" "013" "022" "013"
#> Prog_772 Prog_778 Prog_784 Prog_790 Prog_796 Prog_802 LT-HSC_214 Prog_766 Prog_773
#> "012" "023" "03" "011" "041" "014" "03" "021" "021"
#> Prog_779 Prog_785 Prog_791 Prog_797 Prog_803 LT-HSC_215 Prog_767 Prog_774 Prog_780
#> "013" "03" "012" "03" "043" "03" "011" "012" "011"
#> Prog_786 Prog_792 Prog_798 Prog_804 LT-HSC_216 Prog_768 HSPC_811 HSPC_817 HSPC_823
#> "011" "013" "013" "012" "041" "012" "021" "021" "021"
#> HSPC_829 HSPC_835 HSPC_841 HSPC_847 HSPC_805 HSPC_812 HSPC_818 HSPC_824 HSPC_830
#> "021" "03" "043" "023" "021" "012" "03" "03" "021"
#> HSPC_836 HSPC_842 HSPC_848 HSPC_806 HSPC_813 HSPC_819 HSPC_825 HSPC_831 HSPC_837
#> "023" "023" "022" "023" "012" "042" "03" "03" "041"
#> HSPC_843 HSPC_849 HSPC_807 HSPC_814 HSPC_820 HSPC_826 HSPC_832 HSPC_838 HSPC_844
#> "03" "022" "012" "041" "012" "03" "03" "03" "022"
#> HSPC_850 HSPC_808 HSPC_815 HSPC_821 HSPC_827 HSPC_833 HSPC_839 HSPC_845 HSPC_851
#> "021" "012" "03" "042" "022" "012" "041" "03" "023"
#> HSPC_809 HSPC_816 HSPC_822 HSPC_828 HSPC_834 HSPC_840 HSPC_846 HSPC_852 HSPC_810
#> "022" "042" "03" "03" "03" "022" "042" "022" "022"
#> Prog_811 Prog_817 Prog_823 Prog_829 Prog_835 Prog_841 Prog_847 Prog_805 Prog_812
#> "014" "013" "03" "012" "014" "041" "012" "042" "023"
#> Prog_818 Prog_824 Prog_830 Prog_836 Prog_842 Prog_848 Prog_806 Prog_813 Prog_819
#> "014" "012" "011" "013" "014" "022" "03" "011" "011"
#> Prog_825 Prog_831 Prog_837 Prog_843 Prog_849 Prog_807 Prog_814 Prog_820 Prog_826
#> "011" "014" "014" "013" "042" "014" "011" "013" "011"
#> Prog_832 Prog_838 Prog_844 Prog_850 Prog_808 Prog_815 Prog_821 Prog_827 Prog_833
#> "012" "011" "014" "014" "012" "014" "011" "03" "012"
#> Prog_839 Prog_845 Prog_851 Prog_809 Prog_816 Prog_822 Prog_828 Prog_834 Prog_840
#> "013" "013" "03" "013" "012" "011" "011" "012" "012"
#> Prog_846 Prog_852 Prog_810
#> "012" "041" "013"
get_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 5481))
#> HSPC_007 HSPC_013 HSPC_019 HSPC_025 HSPC_031 HSPC_037 LT-HSC_001 HSPC_001 HSPC_008
#> "021" "023" "021" "04" "03" "04" "023" "012" "04"
#> HSPC_014 HSPC_020 HSPC_026 HSPC_032 HSPC_038 LT-HSC_002 HSPC_002 HSPC_009 HSPC_015
#> "022" "04" "04" "021" "022" "04" "022" "022" "023"
#> HSPC_021 HSPC_027 HSPC_033 HSPC_039 LT-HSC_003 HSPC_003 HSPC_010 HSPC_016 HSPC_022
#> "022" "03" "03" "021" "023" "012" "021" "012" "04"
#> HSPC_028 HSPC_034 HSPC_040 LT-HSC_004 HSPC_004 HSPC_011 HSPC_017 HSPC_023 HSPC_029
#> "03" "012" "03" "022" "03" "04" "022" "04" "021"
#> HSPC_035 HSPC_041 LT-HSC_005 HSPC_005 HSPC_012 HSPC_018 HSPC_024 HSPC_030 HSPC_036
#> "022" "04" "021" "021" "04" "04" "022" "03" "012"
#> HSPC_042 LT-HSC_006 HSPC_006 Prog_007 Prog_013 Prog_019 Prog_025 Prog_031 Prog_037
#> "03" "022" "04" "012" "012" "013" "04" "03" "03"
#> LT-HSC_007 Prog_001 Prog_008 Prog_014 Prog_020 Prog_026 Prog_032 Prog_038 LT-HSC_008
#> "04" "04" "011" "011" "014" "03" "014" "014" "03"
#> Prog_002 Prog_009 Prog_015 Prog_021 Prog_027 Prog_033 Prog_039 LT-HSC_009 Prog_003
#> "012" "011" "012" "014" "012" "011" "011" "022" "012"
#> Prog_010 Prog_016 Prog_022 Prog_028 Prog_034 Prog_040 LT-HSC_010 Prog_004 Prog_011
#> "04" "04" "04" "011" "021" "04" "04" "03" "014"
#> Prog_017 Prog_023 Prog_029 Prog_035 Prog_041 LT-HSC_011 Prog_005 Prog_012 Prog_018
#> "012" "012" "014" "011" "021" "021" "021" "022" "022"
#> Prog_024 Prog_030 Prog_036 Prog_042 LT-HSC_012 Prog_006 HSPC_049 HSPC_055 HSPC_061
#> "014" "04" "04" "04" "04" "011" "03" "04" "04"
#> HSPC_067 HSPC_073 HSPC_079 LT-HSC_013 HSPC_043 HSPC_050 HSPC_056 HSPC_062 HSPC_068
#> "04" "022" "04" "022" "04" "04" "022" "04" "022"
#> HSPC_074 HSPC_080 LT-HSC_014 HSPC_044 HSPC_051 HSPC_057 HSPC_063 HSPC_069 HSPC_075
#> "022" "03" "022" "04" "03" "022" "04" "03" "022"
#> HSPC_081 LT-HSC_015 HSPC_045 HSPC_052 HSPC_058 HSPC_064 HSPC_070 HSPC_076 HSPC_082
#> "03" "022" "04" "04" "03" "04" "03" "03" "04"
#> LT-HSC_016 HSPC_046 HSPC_053 HSPC_059 HSPC_065 HSPC_071 HSPC_077 HSPC_083 LT-HSC_017
#> "022" "03" "012" "021" "03" "04" "012" "022" "022"
#> HSPC_047 HSPC_054 HSPC_060 HSPC_066 HSPC_072 HSPC_078 HSPC_084 LT-HSC_018 HSPC_048
#> "023" "03" "03" "03" "04" "04" "04" "022" "03"
#> Prog_049 Prog_055 Prog_061 Prog_067 Prog_073 Prog_079 LT-HSC_019 Prog_043 Prog_050
#> "011" "012" "011" "014" "03" "011" "021" "013" "012"
#> Prog_056 Prog_062 Prog_068 Prog_074 Prog_080 LT-HSC_020 Prog_044 Prog_051 Prog_057
#> "012" "04" "03" "04" "04" "03" "03" "014" "013"
#> Prog_063 Prog_069 Prog_075 Prog_081 LT-HSC_021 Prog_045 Prog_052 Prog_058 Prog_064
#> "04" "012" "012" "011" "04" "013" "04" "014" "014"
#> Prog_070 Prog_076 Prog_082 LT-HSC_022 Prog_046 Prog_053 Prog_059 Prog_065 Prog_071
#> "04" "014" "011" "022" "011" "011" "012" "013" "012"
#> Prog_077 Prog_083 LT-HSC_023 Prog_047 Prog_054 Prog_060 Prog_066 Prog_072 Prog_078
#> "012" "012" "022" "012" "04" "021" "014" "03" "014"
#> Prog_084 LT-HSC_024 Prog_048 HSPC_091 HSPC_097 HSPC_103 HSPC_109 HSPC_115 HSPC_121
#> "011" "03" "03" "021" "023" "022" "04" "022" "023"
#> LT-HSC_025 HSPC_085 HSPC_092 HSPC_098 HSPC_104 HSPC_110 HSPC_116 HSPC_122 LT-HSC_026
#> "021" "04" "021" "04" "023" "04" "021" "03" "022"
#> HSPC_086 HSPC_093 HSPC_099 HSPC_105 HSPC_111 HSPC_117 HSPC_123 LT-HSC_027 HSPC_087
#> "021" "021" "04" "022" "022" "04" "022" "023" "022"
#> HSPC_094 HSPC_100 HSPC_106 HSPC_112 HSPC_118 HSPC_124 LT-HSC_028 HSPC_088 HSPC_095
#> "012" "03" "022" "021" "03" "021" "03" "03" "022"
#> HSPC_101 HSPC_107 HSPC_113 HSPC_119 HSPC_125 LT-HSC_029 HSPC_089 HSPC_096 HSPC_102
#> "012" "04" "023" "023" "03" "021" "03" "04" "012"
#> HSPC_108 HSPC_114 HSPC_120 HSPC_126 LT-HSC_030 HSPC_090 Prog_091 Prog_097 Prog_103
#> "03" "03" "03" "03" "021" "012" "011" "012" "012"
#> Prog_109 Prog_115 Prog_121 LT-HSC_031 Prog_085 Prog_092 Prog_098 Prog_104 Prog_110
#> "04" "014" "021" "03" "012" "03" "011" "021" "011"
#> Prog_116 Prog_122 LT-HSC_032 Prog_086 Prog_093 Prog_099 Prog_105 Prog_111 Prog_117
#> "012" "03" "011" "021" "012" "012" "012" "014" "013"
#> Prog_123 LT-HSC_033 Prog_087 Prog_094 Prog_100 Prog_106 Prog_112 Prog_118 Prog_124
#> "012" "03" "012" "014" "011" "03" "011" "04" "03"
#> LT-HSC_034 Prog_088 Prog_095 Prog_101 Prog_107 Prog_113 Prog_119 Prog_125 LT-HSC_035
#> "03" "04" "011" "013" "011" "012" "011" "03" "021"
#> Prog_089 Prog_096 Prog_102 Prog_108 Prog_114 Prog_120 Prog_126 LT-HSC_036 Prog_090
#> "014" "03" "03" "04" "04" "023" "014" "03" "011"
#> HSPC_133 HSPC_139 HSPC_145 HSPC_151 HSPC_157 HSPC_163 LT-HSC_037 HSPC_127 HSPC_134
#> "022" "022" "023" "04" "04" "023" "023" "04" "023"
#> HSPC_140 HSPC_146 HSPC_152 HSPC_158 HSPC_164 LT-HSC_038 HSPC_128 HSPC_135 HSPC_141
#> "023" "04" "022" "04" "022" "023" "023" "03" "022"
#> HSPC_147 HSPC_153 HSPC_159 HSPC_165 LT-HSC_039 HSPC_129 HSPC_136 HSPC_142 HSPC_148
#> "023" "022" "04" "04" "022" "021" "04" "04" "04"
#> HSPC_154 HSPC_160 HSPC_166 LT-HSC_040 HSPC_130 HSPC_137 HSPC_143 HSPC_149 HSPC_155
#> "04" "021" "04" "022" "04" "021" "022" "022" "023"
#> HSPC_161 HSPC_167 LT-HSC_041 HSPC_131 HSPC_138 HSPC_144 HSPC_150 HSPC_156 HSPC_162
#> "04" "023" "022" "022" "012" "03" "021" "012" "03"
#> HSPC_168 LT-HSC_042 HSPC_132 Prog_133 Prog_139 Prog_145 Prog_151 Prog_157 Prog_163
#> "04" "022" "013" "012" "011" "012" "03" "012" "011"
#> LT-HSC_043 Prog_127 Prog_134 Prog_140 Prog_146 Prog_152 Prog_158 Prog_164 LT-HSC_044
#> "013" "03" "04" "011" "011" "04" "011" "021" "04"
#> Prog_128 Prog_135 Prog_141 Prog_147 Prog_153 Prog_159 Prog_165 LT-HSC_045 Prog_129
#> "012" "03" "013" "021" "012" "04" "04" "04" "013"
#> Prog_136 Prog_142 Prog_148 Prog_154 Prog_160 Prog_166 LT-HSC_046 Prog_130 Prog_137
#> "013" "03" "023" "03" "022" "014" "03" "013" "012"
#> Prog_143 Prog_149 Prog_155 Prog_161 Prog_167 LT-HSC_047 Prog_131 Prog_138 Prog_144
#> "013" "04" "012" "03" "012" "021" "03" "021" "04"
#> Prog_150 Prog_156 Prog_162 Prog_168 LT-HSC_048 Prog_132 HSPC_175 HSPC_181 HSPC_187
#> "013" "021" "04" "013" "023" "013" "04" "022" "022"
#> HSPC_193 HSPC_199 HSPC_205 LT-HSC_049 HSPC_169 HSPC_176 HSPC_182 HSPC_188 HSPC_194
#> "03" "03" "022" "022" "04" "022" "023" "021" "021"
#> HSPC_200 HSPC_206 LT-HSC_050 HSPC_170 HSPC_177 HSPC_183 HSPC_189 HSPC_195 HSPC_201
#> "022" "012" "022" "023" "022" "03" "03" "012" "021"
#> HSPC_207 LT-HSC_051 HSPC_171 HSPC_178 HSPC_184 HSPC_190 HSPC_196 HSPC_202 HSPC_208
#> "03" "022" "022" "03" "021" "04" "04" "03" "022"
#> LT-HSC_052 HSPC_172 HSPC_179 HSPC_185 HSPC_191 HSPC_197 HSPC_203 HSPC_209 LT-HSC_053
#> "012" "012" "012" "023" "022" "021" "04" "021" "021"
#> HSPC_173 HSPC_180 HSPC_186 HSPC_192 HSPC_198 HSPC_204 HSPC_210 LT-HSC_054 HSPC_174
#> "023" "04" "03" "022" "03" "04" "04" "022" "03"
#> Prog_175 Prog_181 Prog_187 Prog_193 Prog_199 Prog_205 LT-HSC_055 Prog_169 Prog_176
#> "04" "021" "03" "04" "03" "04" "013" "021" "012"
#> Prog_182 Prog_188 Prog_194 Prog_200 Prog_206 LT-HSC_056 Prog_170 Prog_177 Prog_183
#> "04" "014" "023" "04" "012" "013" "011" "04" "013"
#> Prog_189 Prog_195 Prog_201 Prog_207 LT-HSC_057 Prog_171 Prog_178 Prog_184 Prog_190
#> "012" "04" "04" "014" "03" "04" "011" "013" "012"
#> Prog_196 Prog_202 Prog_208 LT-HSC_058 Prog_172 Prog_179 Prog_185 Prog_191 Prog_197
#> "011" "021" "03" "03" "014" "013" "011" "03" "013"
#> Prog_203 Prog_209 LT-HSC_059 Prog_173 Prog_180 Prog_186 Prog_192 Prog_198 Prog_204
#> "013" "013" "021" "04" "03" "012" "012" "021" "023"
#> Prog_210 LT-HSC_060 Prog_174 HSPC_217 HSPC_223 HSPC_229 HSPC_235 HSPC_241 HSPC_247
#> "03" "013" "021" "021" "022" "023" "022" "021" "023"
#> LT-HSC_061 HSPC_211 HSPC_218 HSPC_224 HSPC_230 HSPC_236 HSPC_242 HSPC_248 LT-HSC_062
#> "021" "04" "022" "022" "04" "04" "023" "022" "023"
#> HSPC_212 HSPC_219 HSPC_225 HSPC_231 HSPC_237 HSPC_243 HSPC_249 LT-HSC_063 HSPC_213
#> "023" "04" "022" "023" "022" "04" "022" "03" "04"
#> HSPC_220 HSPC_226 HSPC_232 HSPC_238 HSPC_244 HSPC_250 LT-HSC_064 HSPC_214 HSPC_221
#> "022" "021" "023" "021" "03" "04" "011" "012" "03"
#> HSPC_227 HSPC_233 HSPC_239 HSPC_245 HSPC_251 LT-HSC_065 HSPC_215 HSPC_222 HSPC_228
#> "022" "04" "022" "022" "04" "03" "04" "04" "023"
#> HSPC_234 HSPC_240 HSPC_246 HSPC_252 LT-HSC_066 HSPC_216 Prog_217 Prog_223 Prog_229
#> "021" "03" "022" "021" "03" "012" "011" "04" "011"
#> Prog_235 Prog_241 Prog_247 LT-HSC_067 Prog_211 Prog_218 Prog_224 Prog_230 Prog_236
#> "023" "022" "03" "021" "011" "012" "013" "04" "012"
#> Prog_242 Prog_248 LT-HSC_068 Prog_212 Prog_219 Prog_225 Prog_231 Prog_237 Prog_243
#> "014" "04" "012" "014" "021" "03" "013" "04" "013"
#> Prog_249 LT-HSC_069 Prog_213 Prog_220 Prog_226 Prog_232 Prog_238 Prog_244 Prog_250
#> "011" "03" "04" "021" "03" "03" "012" "03" "014"
#> LT-HSC_070 Prog_214 Prog_221 Prog_227 Prog_233 Prog_239 Prog_245 Prog_251 LT-HSC_071
#> "04" "04" "011" "013" "012" "011" "012" "021" "03"
#> Prog_215 Prog_222 Prog_228 Prog_234 Prog_240 Prog_246 Prog_252 LT-HSC_072 Prog_216
#> "011" "03" "013" "012" "012" "03" "03" "012" "011"
#> HSPC_259 HSPC_265 HSPC_271 HSPC_277 HSPC_283 HSPC_289 LT-HSC_073 HSPC_253 HSPC_260
#> "023" "022" "04" "023" "022" "022" "023" "04" "021"
#> HSPC_266 HSPC_272 HSPC_278 HSPC_284 HSPC_290 LT-HSC_074 HSPC_254 HSPC_261 HSPC_267
#> "022" "021" "04" "021" "04" "022" "022" "013" "03"
#> HSPC_273 HSPC_279 HSPC_285 HSPC_291 LT-HSC_075 HSPC_255 HSPC_262 HSPC_268 HSPC_274
#> "021" "04" "012" "03" "03" "03" "021" "012" "022"
#> HSPC_280 HSPC_286 HSPC_292 LT-HSC_076 HSPC_256 HSPC_263 HSPC_269 HSPC_275 HSPC_281
#> "04" "04" "04" "04" "011" "04" "013" "013" "023"
#> HSPC_287 HSPC_293 LT-HSC_077 HSPC_257 HSPC_264 HSPC_270 HSPC_276 HSPC_282 HSPC_288
#> "04" "04" "023" "04" "022" "03" "03" "012" "012"
#> HSPC_294 LT-HSC_078 HSPC_258 Prog_259 Prog_265 Prog_271 Prog_277 Prog_283 Prog_289
#> "04" "022" "012" "03" "011" "03" "03" "04" "04"
#> LT-HSC_079 Prog_253 Prog_260 Prog_266 Prog_272 Prog_278 Prog_284 Prog_290 LT-HSC_080
#> "021" "014" "012" "012" "012" "011" "014" "011" "03"
#> Prog_254 Prog_261 Prog_267 Prog_273 Prog_279 Prog_285 Prog_291 LT-HSC_081 Prog_255
#> "011" "014" "013" "013" "011" "014" "04" "012" "012"
#> Prog_262 Prog_268 Prog_274 Prog_280 Prog_286 Prog_292 LT-HSC_082 Prog_256 Prog_263
#> "012" "012" "014" "03" "011" "012" "03" "04" "013"
#> Prog_269 Prog_275 Prog_281 Prog_287 Prog_293 LT-HSC_083 Prog_257 Prog_264 Prog_270
#> "011" "012" "014" "013" "03" "021" "021" "023" "013"
#> Prog_276 Prog_282 Prog_288 Prog_294 LT-HSC_084 Prog_258 HSPC_301 HSPC_307 HSPC_313
#> "012" "011" "011" "012" "03" "013" "023" "022" "04"
#> HSPC_319 HSPC_325 HSPC_331 LT-HSC_085 HSPC_295 HSPC_302 HSPC_308 HSPC_314 HSPC_320
#> "021" "022" "022" "022" "04" "023" "04" "04" "04"
#> HSPC_326 HSPC_332 LT-HSC_086 HSPC_296 HSPC_303 HSPC_309 HSPC_315 HSPC_321 HSPC_327
#> "022" "012" "04" "022" "012" "022" "022" "04" "012"
#> HSPC_333 LT-HSC_087 HSPC_297 HSPC_304 HSPC_310 HSPC_316 HSPC_322 HSPC_328 HSPC_334
#> "012" "021" "022" "03" "022" "023" "03" "04" "022"
#> LT-HSC_088 HSPC_298 HSPC_305 HSPC_311 HSPC_317 HSPC_323 HSPC_329 HSPC_335 LT-HSC_089
#> "04" "03" "04" "021" "023" "03" "04" "022" "022"
#> HSPC_299 HSPC_306 HSPC_312 HSPC_318 HSPC_324 HSPC_330 HSPC_336 LT-HSC_090 HSPC_300
#> "03" "03" "04" "022" "03" "03" "022" "03" "012"
#> Prog_301 Prog_307 Prog_313 Prog_319 Prog_325 Prog_331 LT-HSC_091 Prog_295 Prog_302
#> "04" "04" "04" "013" "012" "012" "011" "04" "021"
#> Prog_308 Prog_314 Prog_320 Prog_326 Prog_332 LT-HSC_092 Prog_296 Prog_303 Prog_309
#> "012" "03" "012" "011" "012" "021" "012" "022" "022"
#> Prog_315 Prog_321 Prog_327 Prog_333 LT-HSC_093 Prog_297 Prog_304 Prog_310 Prog_316
#> "04" "04" "012" "04" "04" "04" "012" "04" "04"
#> Prog_322 Prog_328 Prog_334 LT-HSC_094 Prog_298 Prog_305 Prog_311 Prog_317 Prog_323
#> "04" "04" "014" "04" "014" "04" "04" "021" "04"
#> Prog_329 Prog_335 LT-HSC_095 Prog_299 Prog_306 Prog_312 Prog_318 Prog_324 Prog_330
#> "04" "04" "011" "011" "022" "011" "011" "011" "013"
#> Prog_336 LT-HSC_096 Prog_300 HSPC_343 HSPC_349 HSPC_355 HSPC_361 HSPC_367 HSPC_373
#> "013" "012" "013" "013" "03" "021" "023" "022" "023"
#> LT-HSC_097 HSPC_337 HSPC_344 HSPC_350 HSPC_356 HSPC_362 HSPC_368 HSPC_374 LT-HSC_098
#> "021" "022" "04" "022" "04" "04" "04" "03" "011"
#> HSPC_338 HSPC_345 HSPC_351 HSPC_357 HSPC_363 HSPC_369 HSPC_375 LT-HSC_099 HSPC_339
#> "011" "04" "04" "021" "022" "021" "021" "023" "03"
#> HSPC_346 HSPC_352 HSPC_358 HSPC_364 HSPC_370 HSPC_376 LT-HSC_100 HSPC_340 HSPC_347
#> "012" "04" "04" "04" "013" "04" "011" "021" "021"
#> HSPC_353 HSPC_359 HSPC_365 HSPC_371 HSPC_377 LT-HSC_101 HSPC_341 HSPC_348 HSPC_354
#> "012" "03" "023" "012" "04" "04" "012" "03" "022"
#> HSPC_360 HSPC_366 HSPC_372 HSPC_378 LT-HSC_102 HSPC_342 Prog_343 Prog_349 Prog_355
#> "04" "021" "04" "021" "011" "013" "013" "04" "04"
#> Prog_361 Prog_367 Prog_373 LT-HSC_103 Prog_337 Prog_344 Prog_350 Prog_356 Prog_362
#> "014" "013" "011" "013" "011" "021" "014" "011" "04"
#> Prog_368 Prog_374 LT-HSC_104 Prog_338 Prog_345 Prog_351 Prog_357 Prog_363 Prog_369
#> "014" "014" "021" "012" "04" "014" "011" "014" "04"
#> Prog_375 LT-HSC_105 Prog_339 Prog_346 Prog_352 Prog_358 Prog_364 Prog_370 Prog_376
#> "011" "04" "011" "014" "011" "03" "011" "04" "011"
#> LT-HSC_106 Prog_340 Prog_347 Prog_353 Prog_359 Prog_365 Prog_371 Prog_377 LT-HSC_107
#> "04" "014" "021" "013" "011" "021" "012" "011" "023"
#> Prog_341 Prog_348 Prog_354 Prog_360 Prog_366 Prog_372 Prog_378 LT-HSC_108 Prog_342
#> "012" "021" "04" "011" "014" "011" "03" "012" "011"
#> HSPC_385 HSPC_391 HSPC_397 HSPC_403 HSPC_409 HSPC_415 HSPC_421 HSPC_379 HSPC_386
#> "021" "03" "021" "04" "023" "023" "04" "021" "04"
#> HSPC_392 HSPC_398 HSPC_404 HSPC_410 HSPC_416 HSPC_422 HSPC_380 HSPC_387 HSPC_393
#> "03" "03" "011" "012" "03" "03" "03" "04" "04"
#> HSPC_399 HSPC_405 HSPC_411 HSPC_417 HSPC_423 HSPC_381 HSPC_388 HSPC_394 HSPC_400
#> "03" "03" "012" "012" "012" "021" "012" "021" "04"
#> HSPC_406 HSPC_412 HSPC_418 HSPC_424 HSPC_382 HSPC_389 HSPC_395 HSPC_401 HSPC_407
#> "04" "013" "03" "04" "012" "014" "04" "021" "013"
#> HSPC_413 HSPC_419 HSPC_425 HSPC_383 HSPC_390 HSPC_396 HSPC_402 HSPC_408 HSPC_414
#> "04" "013" "04" "022" "04" "03" "03" "011" "021"
#> HSPC_420 HSPC_426 HSPC_384 Prog_385 Prog_391 Prog_397 Prog_403 Prog_409 Prog_415
#> "012" "04" "021" "011" "021" "011" "011" "011" "011"
#> Prog_421 Prog_379 Prog_386 Prog_392 Prog_398 Prog_404 Prog_410 Prog_416 Prog_422
#> "011" "011" "011" "012" "011" "011" "011" "011" "04"
#> Prog_380 Prog_387 Prog_393 Prog_399 Prog_405 Prog_411 Prog_417 Prog_423 Prog_381
#> "011" "013" "011" "012" "012" "04" "04" "04" "011"
#> Prog_388 Prog_394 Prog_400 Prog_406 Prog_412 Prog_418 Prog_424 Prog_382 Prog_389
#> "011" "03" "021" "011" "012" "014" "011" "03" "013"
#> Prog_395 Prog_401 Prog_407 Prog_413 Prog_419 Prog_425 Prog_383 Prog_390 Prog_396
#> "011" "013" "03" "012" "011" "014" "011" "04" "014"
#> Prog_402 Prog_408 Prog_414 Prog_420 Prog_426 Prog_384 HSPC_433 HSPC_439 HSPC_445
#> "04" "014" "013" "012" "012" "04" "021" "021" "021"
#> HSPC_451 HSPC_457 HSPC_463 LT-HSC_109 HSPC_427 HSPC_434 HSPC_440 HSPC_446 HSPC_452
#> "023" "022" "03" "022" "023" "021" "04" "022" "021"
#> HSPC_458 HSPC_464 LT-HSC_110 HSPC_428 HSPC_435 HSPC_441 HSPC_447 HSPC_453 HSPC_459
#> "021" "021" "03" "021" "03" "03" "03" "03" "03"
#> HSPC_465 LT-HSC_111 HSPC_429 HSPC_436 HSPC_442 HSPC_448 HSPC_454 HSPC_460 HSPC_466
#> "03" "022" "021" "013" "012" "03" "013" "03" "04"
#> LT-HSC_112 HSPC_430 HSPC_437 HSPC_443 HSPC_449 HSPC_455 HSPC_461 HSPC_467 LT-HSC_113
#> "03" "03" "021" "03" "03" "022" "04" "03" "03"
#> HSPC_431 HSPC_438 HSPC_444 HSPC_450 HSPC_456 HSPC_462 HSPC_468 LT-HSC_114 HSPC_432
#> "03" "021" "022" "022" "012" "03" "03" "023" "022"
#> Prog_433 Prog_439 Prog_445 Prog_451 Prog_457 Prog_463 LT-HSC_115 Prog_427 Prog_434
#> "03" "03" "03" "013" "014" "03" "012" "022" "011"
#> Prog_440 Prog_446 Prog_452 Prog_458 Prog_464 LT-HSC_116 Prog_428 Prog_435 Prog_441
#> "04" "03" "021" "04" "03" "03" "012" "04" "012"
#> Prog_447 Prog_453 Prog_459 Prog_465 LT-HSC_117 Prog_429 Prog_436 Prog_442 Prog_448
#> "012" "014" "03" "04" "03" "011" "012" "021" "03"
#> Prog_454 Prog_460 Prog_466 LT-HSC_118 Prog_430 Prog_437 Prog_443 Prog_449 Prog_455
#> "04" "04" "04" "021" "011" "013" "013" "011" "03"
#> Prog_461 Prog_467 LT-HSC_119 Prog_431 Prog_438 Prog_444 Prog_450 Prog_456 Prog_462
#> "022" "03" "021" "03" "022" "011" "012" "012" "04"
#> Prog_468 LT-HSC_120 Prog_432 HSPC_475 HSPC_481 HSPC_487 HSPC_493 HSPC_499 HSPC_505
#> "04" "04" "04" "022" "023" "021" "022" "022" "04"
#> LT-HSC_121 HSPC_469 HSPC_476 HSPC_482 HSPC_488 HSPC_494 HSPC_500 HSPC_506 LT-HSC_122
#> "021" "023" "021" "022" "022" "022" "022" "022" "04"
#> HSPC_470 HSPC_477 HSPC_483 HSPC_489 HSPC_495 HSPC_501 HSPC_507 LT-HSC_123 HSPC_471
#> "022" "012" "022" "04" "04" "023" "022" "022" "022"
#> HSPC_478 HSPC_484 HSPC_490 HSPC_496 HSPC_502 HSPC_508 LT-HSC_124 HSPC_472 HSPC_479
#> "022" "021" "03" "03" "03" "013" "03" "03" "03"
#> HSPC_485 HSPC_491 HSPC_497 HSPC_503 HSPC_509 LT-HSC_125 HSPC_473 HSPC_480 HSPC_486
#> "012" "04" "022" "012" "04" "03" "03" "03" "04"
#> HSPC_492 HSPC_498 HSPC_504 HSPC_510 LT-HSC_126 HSPC_474 Prog_475 Prog_481 Prog_487
#> "03" "03" "022" "04" "03" "03" "013" "03" "013"
#> Prog_493 Prog_499 Prog_505 LT-HSC_127 Prog_469 Prog_476 Prog_482 Prog_488 Prog_494
#> "012" "012" "013" "021" "04" "012" "012" "013" "04"
#> Prog_500 Prog_506 LT-HSC_128 Prog_470 Prog_477 Prog_483 Prog_489 Prog_495 Prog_501
#> "013" "012" "03" "012" "011" "04" "012" "03" "012"
#> Prog_507 LT-HSC_129 Prog_471 Prog_478 Prog_484 Prog_490 Prog_496 Prog_502 Prog_508
#> "04" "021" "012" "011" "012" "04" "03" "011" "011"
#> LT-HSC_130 Prog_472 Prog_479 Prog_485 Prog_491 Prog_497 Prog_503 Prog_509 LT-HSC_131
#> "013" "04" "012" "013" "013" "04" "04" "03" "03"
#> Prog_473 Prog_480 Prog_486 Prog_492 Prog_498 Prog_504 Prog_510 LT-HSC_132 Prog_474
#> "012" "023" "012" "03" "021" "012" "04" "014" "03"
#> HSPC_517 HSPC_523 HSPC_529 HSPC_535 HSPC_541 HSPC_547 LT-HSC_133 HSPC_511 HSPC_518
#> "023" "03" "021" "022" "022" "03" "021" "023" "022"
#> HSPC_524 HSPC_530 HSPC_536 HSPC_542 HSPC_548 LT-HSC_134 HSPC_512 HSPC_519 HSPC_525
#> "022" "022" "021" "021" "022" "023" "03" "021" "023"
#> HSPC_531 HSPC_537 HSPC_543 HSPC_549 LT-HSC_135 HSPC_513 HSPC_520 HSPC_526 HSPC_532
#> "022" "04" "04" "022" "022" "021" "04" "03" "04"
#> HSPC_538 HSPC_544 HSPC_550 LT-HSC_136 HSPC_514 HSPC_521 HSPC_527 HSPC_533 HSPC_539
#> "03" "012" "04" "023" "03" "022" "012" "03" "022"
#> HSPC_545 HSPC_551 LT-HSC_137 HSPC_515 HSPC_522 HSPC_528 HSPC_534 HSPC_540 HSPC_546
#> "022" "04" "022" "03" "022" "04" "03" "03" "022"
#> HSPC_552 LT-HSC_138 HSPC_516 Prog_517 Prog_523 Prog_529 Prog_535 Prog_541 Prog_547
#> "04" "022" "03" "03" "011" "013" "011" "013" "013"
#> LT-HSC_139 Prog_511 Prog_518 Prog_524 Prog_530 Prog_536 Prog_542 Prog_548 LT-HSC_140
#> "03" "03" "04" "04" "012" "011" "04" "011" "022"
#> Prog_512 Prog_519 Prog_525 Prog_531 Prog_537 Prog_543 Prog_549 LT-HSC_141 Prog_513
#> "04" "04" "04" "013" "022" "014" "04" "021" "03"
#> Prog_520 Prog_526 Prog_532 Prog_538 Prog_544 Prog_550 LT-HSC_142 Prog_514 Prog_521
#> "013" "023" "022" "021" "023" "012" "012" "012" "012"
#> Prog_527 Prog_533 Prog_539 Prog_545 Prog_551 LT-HSC_143 Prog_515 Prog_522 Prog_528
#> "012" "022" "04" "014" "012" "013" "04" "022" "014"
#> Prog_534 Prog_540 Prog_546 Prog_552 LT-HSC_144 Prog_516 HSPC_559 HSPC_565 HSPC_571
#> "04" "023" "023" "04" "04" "011" "022" "023" "03"
#> HSPC_577 HSPC_583 HSPC_589 LT-HSC_145 HSPC_553 HSPC_560 HSPC_566 HSPC_572 HSPC_578
#> "022" "021" "022" "022" "013" "022" "022" "023" "022"
#> HSPC_584 HSPC_590 LT-HSC_146 HSPC_554 HSPC_561 HSPC_567 HSPC_573 HSPC_579 HSPC_585
#> "022" "04" "03" "022" "021" "03" "022" "03" "022"
#> HSPC_591 LT-HSC_147 HSPC_555 HSPC_562 HSPC_568 HSPC_574 HSPC_580 HSPC_586 HSPC_592
#> "023" "022" "022" "023" "022" "012" "03" "03" "03"
#> LT-HSC_148 HSPC_556 HSPC_563 HSPC_569 HSPC_575 HSPC_581 HSPC_587 HSPC_593 LT-HSC_149
#> "04" "03" "03" "04" "03" "021" "021" "022" "022"
#> HSPC_557 HSPC_564 HSPC_570 HSPC_576 HSPC_582 HSPC_588 HSPC_594 LT-HSC_150 HSPC_558
#> "03" "021" "021" "022" "022" "021" "022" "022" "021"
#> Prog_559 Prog_565 Prog_571 Prog_577 Prog_583 Prog_589 LT-HSC_151 Prog_553 Prog_560
#> "012" "012" "012" "012" "023" "023" "03" "04" "012"
#> Prog_566 Prog_572 Prog_578 Prog_584 Prog_590 LT-HSC_152 Prog_554 Prog_561 Prog_567
#> "014" "03" "04" "012" "012" "022" "03" "04" "012"
#> Prog_573 Prog_579 Prog_585 Prog_591 LT-HSC_153 Prog_555 Prog_562 Prog_568 Prog_574
#> "023" "012" "03" "023" "022" "03" "011" "03" "012"
#> Prog_580 Prog_586 Prog_592 LT-HSC_154 Prog_556 Prog_563 Prog_569 Prog_575 Prog_581
#> "03" "04" "011" "021" "03" "021" "013" "011" "012"
#> Prog_587 Prog_593 LT-HSC_155 Prog_557 Prog_564 Prog_570 Prog_576 Prog_582 Prog_588
#> "013" "012" "021" "012" "03" "04" "014" "012" "03"
#> Prog_594 LT-HSC_156 Prog_558 HSPC_601 HSPC_607 HSPC_613 HSPC_619 HSPC_625 HSPC_631
#> "03" "012" "03" "04" "023" "04" "021" "022" "04"
#> LT-HSC_157 HSPC_595 HSPC_602 HSPC_608 HSPC_614 HSPC_620 HSPC_626 HSPC_632 LT-HSC_158
#> "023" "03" "022" "022" "04" "022" "023" "021" "022"
#> HSPC_596 HSPC_603 HSPC_609 HSPC_615 HSPC_621 HSPC_627 HSPC_633 LT-HSC_159 HSPC_597
#> "04" "03" "023" "023" "021" "04" "023" "04" "04"
#> HSPC_604 HSPC_610 HSPC_616 HSPC_622 HSPC_628 HSPC_634 LT-HSC_160 HSPC_598 HSPC_605
#> "022" "022" "021" "021" "04" "04" "023" "04" "021"
#> HSPC_611 HSPC_617 HSPC_623 HSPC_629 HSPC_635 LT-HSC_161 HSPC_599 HSPC_606 HSPC_612
#> "021" "03" "04" "04" "04" "023" "022" "03" "03"
#> HSPC_618 HSPC_624 HSPC_630 HSPC_636 LT-HSC_162 HSPC_600 Prog_601 Prog_607 Prog_613
#> "022" "03" "022" "03" "023" "023" "021" "012" "03"
#> Prog_619 Prog_625 Prog_631 LT-HSC_163 Prog_595 Prog_602 Prog_608 Prog_614 Prog_620
#> "022" "04" "03" "022" "022" "013" "011" "013" "04"
#> Prog_626 Prog_632 LT-HSC_164 Prog_596 Prog_603 Prog_609 Prog_615 Prog_621 Prog_627
#> "012" "012" "03" "03" "011" "012" "04" "012" "03"
#> Prog_633 LT-HSC_165 Prog_597 Prog_604 Prog_610 Prog_616 Prog_622 Prog_628 Prog_634
#> "04" "022" "03" "03" "03" "011" "012" "012" "04"
#> LT-HSC_166 Prog_598 Prog_605 Prog_611 Prog_617 Prog_623 Prog_629 Prog_635 LT-HSC_167
#> "04" "012" "014" "03" "03" "013" "012" "03" "022"
#> Prog_599 Prog_606 Prog_612 Prog_618 Prog_624 Prog_630 Prog_636 LT-HSC_168 Prog_600
#> "012" "03" "013" "012" "012" "013" "021" "013" "012"
#> HSPC_643 HSPC_649 HSPC_655 HSPC_661 HSPC_667 HSPC_673 LT-HSC_169 HSPC_637 HSPC_644
#> "04" "03" "021" "04" "022" "022" "023" "03" "013"
#> HSPC_650 HSPC_656 HSPC_662 HSPC_668 HSPC_674 LT-HSC_170 HSPC_638 HSPC_645 HSPC_651
#> "021" "022" "022" "03" "03" "04" "013" "03" "04"
#> HSPC_657 HSPC_663 HSPC_669 HSPC_675 LT-HSC_171 HSPC_639 HSPC_646 HSPC_652 HSPC_658
#> "023" "04" "022" "021" "04" "03" "03" "04" "04"
#> HSPC_664 HSPC_670 HSPC_676 LT-HSC_172 HSPC_640 HSPC_647 HSPC_653 HSPC_659 HSPC_665
#> "03" "023" "022" "022" "03" "022" "021" "021" "04"
#> HSPC_671 HSPC_677 LT-HSC_173 HSPC_641 HSPC_648 HSPC_654 HSPC_660 HSPC_666 HSPC_672
#> "03" "023" "022" "03" "022" "04" "04" "04" "03"
#> HSPC_678 LT-HSC_174 HSPC_642 Prog_643 Prog_649 Prog_655 Prog_661 Prog_667 Prog_673
#> "022" "03" "021" "04" "011" "011" "013" "04" "04"
#> LT-HSC_175 Prog_637 Prog_644 Prog_650 Prog_656 Prog_662 Prog_668 Prog_674 LT-HSC_176
#> "021" "014" "03" "012" "03" "03" "023" "03" "022"
#> Prog_638 Prog_645 Prog_651 Prog_657 Prog_663 Prog_669 Prog_675 LT-HSC_177 Prog_639
#> "011" "04" "03" "011" "011" "023" "012" "022" "014"
#> Prog_646 Prog_652 Prog_658 Prog_664 Prog_670 Prog_676 LT-HSC_178 Prog_640 Prog_647
#> "012" "012" "012" "023" "012" "03" "021" "011" "04"
#> Prog_653 Prog_659 Prog_665 Prog_671 Prog_677 LT-HSC_179 Prog_641 Prog_648 Prog_654
#> "04" "03" "03" "03" "011" "03" "023" "04" "013"
#> Prog_660 Prog_666 Prog_672 Prog_678 LT-HSC_180 Prog_642 HSPC_685 HSPC_691 HSPC_697
#> "03" "03" "03" "04" "04" "03" "021" "021" "04"
#> HSPC_703 HSPC_709 HSPC_715 LT-HSC_181 HSPC_679 HSPC_686 HSPC_692 HSPC_698 HSPC_704
#> "022" "023" "021" "021" "03" "021" "023" "022" "022"
#> HSPC_710 HSPC_716 LT-HSC_182 HSPC_680 HSPC_687 HSPC_693 HSPC_699 HSPC_705 HSPC_711
#> "021" "022" "021" "022" "023" "023" "022" "012" "021"
#> HSPC_717 LT-HSC_183 HSPC_681 HSPC_688 HSPC_694 HSPC_700 HSPC_706 HSPC_712 HSPC_718
#> "04" "03" "04" "021" "021" "04" "03" "021" "021"
#> LT-HSC_184 HSPC_682 HSPC_689 HSPC_695 HSPC_701 HSPC_707 HSPC_713 HSPC_719 LT-HSC_185
#> "03" "012" "022" "013" "04" "04" "021" "022" "023"
#> HSPC_683 HSPC_690 HSPC_696 HSPC_702 HSPC_708 HSPC_714 HSPC_720 LT-HSC_186 HSPC_684
#> "04" "022" "04" "022" "03" "022" "012" "021" "023"
#> Prog_685 Prog_691 Prog_697 Prog_703 Prog_709 Prog_715 LT-HSC_187 Prog_679 Prog_686
#> "012" "021" "011" "04" "014" "012" "03" "012" "04"
#> Prog_692 Prog_698 Prog_704 Prog_710 Prog_716 LT-HSC_188 Prog_680 Prog_687 Prog_693
#> "03" "013" "03" "03" "03" "03" "012" "012" "012"
#> Prog_699 Prog_705 Prog_711 Prog_717 LT-HSC_189 Prog_681 Prog_688 Prog_694 Prog_700
#> "012" "012" "03" "012" "021" "013" "011" "03" "011"
#> Prog_706 Prog_712 Prog_718 LT-HSC_190 Prog_682 Prog_689 Prog_695 Prog_701 Prog_707
#> "013" "013" "012" "023" "013" "03" "011" "011" "03"
#> Prog_713 Prog_719 LT-HSC_191 Prog_683 Prog_690 Prog_696 Prog_702 Prog_708 Prog_714
#> "013" "011" "03" "023" "03" "04" "014" "014" "014"
#> Prog_720 LT-HSC_192 Prog_684 HSPC_727 HSPC_733 HSPC_739 HSPC_745 HSPC_751 HSPC_757
#> "014" "012" "03" "022" "022" "023" "023" "022" "022"
#> LT-HSC_193 HSPC_721 HSPC_728 HSPC_734 HSPC_740 HSPC_746 HSPC_752 HSPC_758 LT-HSC_194
#> "022" "023" "021" "012" "022" "023" "023" "03" "022"
#> HSPC_722 HSPC_729 HSPC_735 HSPC_741 HSPC_747 HSPC_753 HSPC_759 LT-HSC_195 HSPC_723
#> "03" "03" "04" "021" "022" "03" "03" "03" "03"
#> HSPC_730 HSPC_736 HSPC_742 HSPC_748 HSPC_754 HSPC_760 LT-HSC_196 HSPC_724 HSPC_731
#> "03" "03" "03" "022" "021" "04" "021" "03" "04"
#> HSPC_737 HSPC_743 HSPC_749 HSPC_755 HSPC_761 LT-HSC_197 HSPC_725 HSPC_732 HSPC_738
#> "012" "03" "022" "03" "03" "022" "023" "03" "022"
#> HSPC_744 HSPC_750 HSPC_756 HSPC_762 LT-HSC_198 HSPC_726 Prog_727 Prog_733 Prog_739
#> "04" "03" "022" "04" "022" "021" "012" "03" "04"
#> Prog_745 Prog_751 Prog_757 LT-HSC_199 Prog_721 Prog_728 Prog_734 Prog_740 Prog_746
#> "03" "03" "04" "021" "014" "03" "014" "03" "04"
#> Prog_752 Prog_758 LT-HSC_200 Prog_722 Prog_729 Prog_735 Prog_741 Prog_747 Prog_753
#> "03" "03" "022" "014" "023" "012" "021" "03" "013"
#> Prog_759 LT-HSC_201 Prog_723 Prog_730 Prog_736 Prog_742 Prog_748 Prog_754 Prog_760
#> "012" "022" "011" "011" "013" "021" "04" "013" "012"
#> LT-HSC_202 Prog_724 Prog_731 Prog_737 Prog_743 Prog_749 Prog_755 Prog_761 LT-HSC_203
#> "03" "03" "011" "03" "012" "04" "021" "04" "021"
#> Prog_725 Prog_732 Prog_738 Prog_744 Prog_750 Prog_756 Prog_762 LT-HSC_204 Prog_726
#> "03" "04" "03" "03" "04" "04" "03" "03" "03"
#> HSPC_769 HSPC_775 HSPC_781 HSPC_787 HSPC_793 HSPC_799 LT-HSC_205 HSPC_763 HSPC_770
#> "023" "023" "022" "023" "021" "023" "023" "021" "04"
#> HSPC_776 HSPC_782 HSPC_788 HSPC_794 HSPC_800 LT-HSC_206 HSPC_764 HSPC_771 HSPC_777
#> "023" "022" "023" "03" "04" "022" "022" "03" "03"
#> HSPC_783 HSPC_789 HSPC_795 HSPC_801 LT-HSC_207 HSPC_765 HSPC_772 HSPC_778 HSPC_784
#> "022" "04" "03" "03" "04" "023" "04" "03" "03"
#> HSPC_790 HSPC_796 HSPC_802 LT-HSC_208 HSPC_766 HSPC_773 HSPC_779 HSPC_785 HSPC_791
#> "04" "012" "022" "022" "012" "03" "04" "03" "04"
#> HSPC_797 HSPC_803 LT-HSC_209 HSPC_767 HSPC_774 HSPC_780 HSPC_786 HSPC_792 HSPC_798
#> "03" "022" "021" "012" "03" "03" "03" "021" "022"
#> HSPC_804 LT-HSC_210 HSPC_768 Prog_769 Prog_775 Prog_781 Prog_787 Prog_793 Prog_799
#> "022" "022" "023" "012" "03" "012" "04" "013" "03"
#> LT-HSC_211 Prog_763 Prog_770 Prog_776 Prog_782 Prog_788 Prog_794 Prog_800 LT-HSC_212
#> "04" "012" "014" "011" "012" "011" "012" "012" "03"
#> Prog_764 Prog_771 Prog_777 Prog_783 Prog_789 Prog_795 Prog_801 LT-HSC_213 Prog_765
#> "012" "014" "012" "014" "012" "012" "013" "022" "013"
#> Prog_772 Prog_778 Prog_784 Prog_790 Prog_796 Prog_802 LT-HSC_214 Prog_766 Prog_773
#> "012" "023" "03" "011" "04" "014" "03" "021" "021"
#> Prog_779 Prog_785 Prog_791 Prog_797 Prog_803 LT-HSC_215 Prog_767 Prog_774 Prog_780
#> "013" "03" "012" "03" "04" "03" "011" "012" "011"
#> Prog_786 Prog_792 Prog_798 Prog_804 LT-HSC_216 Prog_768 HSPC_811 HSPC_817 HSPC_823
#> "011" "013" "013" "012" "04" "012" "021" "021" "021"
#> HSPC_829 HSPC_835 HSPC_841 HSPC_847 HSPC_805 HSPC_812 HSPC_818 HSPC_824 HSPC_830
#> "021" "03" "04" "023" "021" "012" "03" "03" "021"
#> HSPC_836 HSPC_842 HSPC_848 HSPC_806 HSPC_813 HSPC_819 HSPC_825 HSPC_831 HSPC_837
#> "023" "023" "022" "023" "012" "04" "03" "03" "04"
#> HSPC_843 HSPC_849 HSPC_807 HSPC_814 HSPC_820 HSPC_826 HSPC_832 HSPC_838 HSPC_844
#> "03" "022" "012" "04" "012" "03" "03" "03" "022"
#> HSPC_850 HSPC_808 HSPC_815 HSPC_821 HSPC_827 HSPC_833 HSPC_839 HSPC_845 HSPC_851
#> "021" "012" "03" "04" "022" "012" "04" "03" "023"
#> HSPC_809 HSPC_816 HSPC_822 HSPC_828 HSPC_834 HSPC_840 HSPC_846 HSPC_852 HSPC_810
#> "022" "04" "03" "03" "03" "022" "04" "022" "022"
#> Prog_811 Prog_817 Prog_823 Prog_829 Prog_835 Prog_841 Prog_847 Prog_805 Prog_812
#> "014" "013" "03" "012" "014" "04" "012" "04" "023"
#> Prog_818 Prog_824 Prog_830 Prog_836 Prog_842 Prog_848 Prog_806 Prog_813 Prog_819
#> "014" "012" "011" "013" "014" "022" "03" "011" "011"
#> Prog_825 Prog_831 Prog_837 Prog_843 Prog_849 Prog_807 Prog_814 Prog_820 Prog_826
#> "011" "014" "014" "013" "04" "014" "011" "013" "011"
#> Prog_832 Prog_838 Prog_844 Prog_850 Prog_808 Prog_815 Prog_821 Prog_827 Prog_833
#> "012" "011" "014" "014" "012" "014" "011" "03" "012"
#> Prog_839 Prog_845 Prog_851 Prog_809 Prog_816 Prog_822 Prog_828 Prog_834 Prog_840
#> "013" "013" "03" "013" "012" "011" "011" "012" "012"
#> Prog_846 Prog_852 Prog_810
#> "012" "04" "013"
get_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 12492))
#> HSPC_007 HSPC_013 HSPC_019 HSPC_025 HSPC_031 HSPC_037 LT-HSC_001 HSPC_001 HSPC_008
#> "02" "02" "02" "04" "03" "04" "02" "012" "04"
#> HSPC_014 HSPC_020 HSPC_026 HSPC_032 HSPC_038 LT-HSC_002 HSPC_002 HSPC_009 HSPC_015
#> "02" "04" "04" "02" "02" "04" "02" "02" "02"
#> HSPC_021 HSPC_027 HSPC_033 HSPC_039 LT-HSC_003 HSPC_003 HSPC_010 HSPC_016 HSPC_022
#> "02" "03" "03" "02" "02" "012" "02" "012" "04"
#> HSPC_028 HSPC_034 HSPC_040 LT-HSC_004 HSPC_004 HSPC_011 HSPC_017 HSPC_023 HSPC_029
#> "03" "012" "03" "02" "03" "04" "02" "04" "02"
#> HSPC_035 HSPC_041 LT-HSC_005 HSPC_005 HSPC_012 HSPC_018 HSPC_024 HSPC_030 HSPC_036
#> "02" "04" "02" "02" "04" "04" "02" "03" "012"
#> HSPC_042 LT-HSC_006 HSPC_006 Prog_007 Prog_013 Prog_019 Prog_025 Prog_031 Prog_037
#> "03" "02" "04" "012" "012" "013" "04" "03" "03"
#> LT-HSC_007 Prog_001 Prog_008 Prog_014 Prog_020 Prog_026 Prog_032 Prog_038 LT-HSC_008
#> "04" "04" "011" "011" "014" "03" "014" "014" "03"
#> Prog_002 Prog_009 Prog_015 Prog_021 Prog_027 Prog_033 Prog_039 LT-HSC_009 Prog_003
#> "012" "011" "012" "014" "012" "011" "011" "02" "012"
#> Prog_010 Prog_016 Prog_022 Prog_028 Prog_034 Prog_040 LT-HSC_010 Prog_004 Prog_011
#> "04" "04" "04" "011" "02" "04" "04" "03" "014"
#> Prog_017 Prog_023 Prog_029 Prog_035 Prog_041 LT-HSC_011 Prog_005 Prog_012 Prog_018
#> "012" "012" "014" "011" "02" "02" "02" "02" "02"
#> Prog_024 Prog_030 Prog_036 Prog_042 LT-HSC_012 Prog_006 HSPC_049 HSPC_055 HSPC_061
#> "014" "04" "04" "04" "04" "011" "03" "04" "04"
#> HSPC_067 HSPC_073 HSPC_079 LT-HSC_013 HSPC_043 HSPC_050 HSPC_056 HSPC_062 HSPC_068
#> "04" "02" "04" "02" "04" "04" "02" "04" "02"
#> HSPC_074 HSPC_080 LT-HSC_014 HSPC_044 HSPC_051 HSPC_057 HSPC_063 HSPC_069 HSPC_075
#> "02" "03" "02" "04" "03" "02" "04" "03" "02"
#> HSPC_081 LT-HSC_015 HSPC_045 HSPC_052 HSPC_058 HSPC_064 HSPC_070 HSPC_076 HSPC_082
#> "03" "02" "04" "04" "03" "04" "03" "03" "04"
#> LT-HSC_016 HSPC_046 HSPC_053 HSPC_059 HSPC_065 HSPC_071 HSPC_077 HSPC_083 LT-HSC_017
#> "02" "03" "012" "02" "03" "04" "012" "02" "02"
#> HSPC_047 HSPC_054 HSPC_060 HSPC_066 HSPC_072 HSPC_078 HSPC_084 LT-HSC_018 HSPC_048
#> "02" "03" "03" "03" "04" "04" "04" "02" "03"
#> Prog_049 Prog_055 Prog_061 Prog_067 Prog_073 Prog_079 LT-HSC_019 Prog_043 Prog_050
#> "011" "012" "011" "014" "03" "011" "02" "013" "012"
#> Prog_056 Prog_062 Prog_068 Prog_074 Prog_080 LT-HSC_020 Prog_044 Prog_051 Prog_057
#> "012" "04" "03" "04" "04" "03" "03" "014" "013"
#> Prog_063 Prog_069 Prog_075 Prog_081 LT-HSC_021 Prog_045 Prog_052 Prog_058 Prog_064
#> "04" "012" "012" "011" "04" "013" "04" "014" "014"
#> Prog_070 Prog_076 Prog_082 LT-HSC_022 Prog_046 Prog_053 Prog_059 Prog_065 Prog_071
#> "04" "014" "011" "02" "011" "011" "012" "013" "012"
#> Prog_077 Prog_083 LT-HSC_023 Prog_047 Prog_054 Prog_060 Prog_066 Prog_072 Prog_078
#> "012" "012" "02" "012" "04" "02" "014" "03" "014"
#> Prog_084 LT-HSC_024 Prog_048 HSPC_091 HSPC_097 HSPC_103 HSPC_109 HSPC_115 HSPC_121
#> "011" "03" "03" "02" "02" "02" "04" "02" "02"
#> LT-HSC_025 HSPC_085 HSPC_092 HSPC_098 HSPC_104 HSPC_110 HSPC_116 HSPC_122 LT-HSC_026
#> "02" "04" "02" "04" "02" "04" "02" "03" "02"
#> HSPC_086 HSPC_093 HSPC_099 HSPC_105 HSPC_111 HSPC_117 HSPC_123 LT-HSC_027 HSPC_087
#> "02" "02" "04" "02" "02" "04" "02" "02" "02"
#> HSPC_094 HSPC_100 HSPC_106 HSPC_112 HSPC_118 HSPC_124 LT-HSC_028 HSPC_088 HSPC_095
#> "012" "03" "02" "02" "03" "02" "03" "03" "02"
#> HSPC_101 HSPC_107 HSPC_113 HSPC_119 HSPC_125 LT-HSC_029 HSPC_089 HSPC_096 HSPC_102
#> "012" "04" "02" "02" "03" "02" "03" "04" "012"
#> HSPC_108 HSPC_114 HSPC_120 HSPC_126 LT-HSC_030 HSPC_090 Prog_091 Prog_097 Prog_103
#> "03" "03" "03" "03" "02" "012" "011" "012" "012"
#> Prog_109 Prog_115 Prog_121 LT-HSC_031 Prog_085 Prog_092 Prog_098 Prog_104 Prog_110
#> "04" "014" "02" "03" "012" "03" "011" "02" "011"
#> Prog_116 Prog_122 LT-HSC_032 Prog_086 Prog_093 Prog_099 Prog_105 Prog_111 Prog_117
#> "012" "03" "011" "02" "012" "012" "012" "014" "013"
#> Prog_123 LT-HSC_033 Prog_087 Prog_094 Prog_100 Prog_106 Prog_112 Prog_118 Prog_124
#> "012" "03" "012" "014" "011" "03" "011" "04" "03"
#> LT-HSC_034 Prog_088 Prog_095 Prog_101 Prog_107 Prog_113 Prog_119 Prog_125 LT-HSC_035
#> "03" "04" "011" "013" "011" "012" "011" "03" "02"
#> Prog_089 Prog_096 Prog_102 Prog_108 Prog_114 Prog_120 Prog_126 LT-HSC_036 Prog_090
#> "014" "03" "03" "04" "04" "02" "014" "03" "011"
#> HSPC_133 HSPC_139 HSPC_145 HSPC_151 HSPC_157 HSPC_163 LT-HSC_037 HSPC_127 HSPC_134
#> "02" "02" "02" "04" "04" "02" "02" "04" "02"
#> HSPC_140 HSPC_146 HSPC_152 HSPC_158 HSPC_164 LT-HSC_038 HSPC_128 HSPC_135 HSPC_141
#> "02" "04" "02" "04" "02" "02" "02" "03" "02"
#> HSPC_147 HSPC_153 HSPC_159 HSPC_165 LT-HSC_039 HSPC_129 HSPC_136 HSPC_142 HSPC_148
#> "02" "02" "04" "04" "02" "02" "04" "04" "04"
#> HSPC_154 HSPC_160 HSPC_166 LT-HSC_040 HSPC_130 HSPC_137 HSPC_143 HSPC_149 HSPC_155
#> "04" "02" "04" "02" "04" "02" "02" "02" "02"
#> HSPC_161 HSPC_167 LT-HSC_041 HSPC_131 HSPC_138 HSPC_144 HSPC_150 HSPC_156 HSPC_162
#> "04" "02" "02" "02" "012" "03" "02" "012" "03"
#> HSPC_168 LT-HSC_042 HSPC_132 Prog_133 Prog_139 Prog_145 Prog_151 Prog_157 Prog_163
#> "04" "02" "013" "012" "011" "012" "03" "012" "011"
#> LT-HSC_043 Prog_127 Prog_134 Prog_140 Prog_146 Prog_152 Prog_158 Prog_164 LT-HSC_044
#> "013" "03" "04" "011" "011" "04" "011" "02" "04"
#> Prog_128 Prog_135 Prog_141 Prog_147 Prog_153 Prog_159 Prog_165 LT-HSC_045 Prog_129
#> "012" "03" "013" "02" "012" "04" "04" "04" "013"
#> Prog_136 Prog_142 Prog_148 Prog_154 Prog_160 Prog_166 LT-HSC_046 Prog_130 Prog_137
#> "013" "03" "02" "03" "02" "014" "03" "013" "012"
#> Prog_143 Prog_149 Prog_155 Prog_161 Prog_167 LT-HSC_047 Prog_131 Prog_138 Prog_144
#> "013" "04" "012" "03" "012" "02" "03" "02" "04"
#> Prog_150 Prog_156 Prog_162 Prog_168 LT-HSC_048 Prog_132 HSPC_175 HSPC_181 HSPC_187
#> "013" "02" "04" "013" "02" "013" "04" "02" "02"
#> HSPC_193 HSPC_199 HSPC_205 LT-HSC_049 HSPC_169 HSPC_176 HSPC_182 HSPC_188 HSPC_194
#> "03" "03" "02" "02" "04" "02" "02" "02" "02"
#> HSPC_200 HSPC_206 LT-HSC_050 HSPC_170 HSPC_177 HSPC_183 HSPC_189 HSPC_195 HSPC_201
#> "02" "012" "02" "02" "02" "03" "03" "012" "02"
#> HSPC_207 LT-HSC_051 HSPC_171 HSPC_178 HSPC_184 HSPC_190 HSPC_196 HSPC_202 HSPC_208
#> "03" "02" "02" "03" "02" "04" "04" "03" "02"
#> LT-HSC_052 HSPC_172 HSPC_179 HSPC_185 HSPC_191 HSPC_197 HSPC_203 HSPC_209 LT-HSC_053
#> "012" "012" "012" "02" "02" "02" "04" "02" "02"
#> HSPC_173 HSPC_180 HSPC_186 HSPC_192 HSPC_198 HSPC_204 HSPC_210 LT-HSC_054 HSPC_174
#> "02" "04" "03" "02" "03" "04" "04" "02" "03"
#> Prog_175 Prog_181 Prog_187 Prog_193 Prog_199 Prog_205 LT-HSC_055 Prog_169 Prog_176
#> "04" "02" "03" "04" "03" "04" "013" "02" "012"
#> Prog_182 Prog_188 Prog_194 Prog_200 Prog_206 LT-HSC_056 Prog_170 Prog_177 Prog_183
#> "04" "014" "02" "04" "012" "013" "011" "04" "013"
#> Prog_189 Prog_195 Prog_201 Prog_207 LT-HSC_057 Prog_171 Prog_178 Prog_184 Prog_190
#> "012" "04" "04" "014" "03" "04" "011" "013" "012"
#> Prog_196 Prog_202 Prog_208 LT-HSC_058 Prog_172 Prog_179 Prog_185 Prog_191 Prog_197
#> "011" "02" "03" "03" "014" "013" "011" "03" "013"
#> Prog_203 Prog_209 LT-HSC_059 Prog_173 Prog_180 Prog_186 Prog_192 Prog_198 Prog_204
#> "013" "013" "02" "04" "03" "012" "012" "02" "02"
#> Prog_210 LT-HSC_060 Prog_174 HSPC_217 HSPC_223 HSPC_229 HSPC_235 HSPC_241 HSPC_247
#> "03" "013" "02" "02" "02" "02" "02" "02" "02"
#> LT-HSC_061 HSPC_211 HSPC_218 HSPC_224 HSPC_230 HSPC_236 HSPC_242 HSPC_248 LT-HSC_062
#> "02" "04" "02" "02" "04" "04" "02" "02" "02"
#> HSPC_212 HSPC_219 HSPC_225 HSPC_231 HSPC_237 HSPC_243 HSPC_249 LT-HSC_063 HSPC_213
#> "02" "04" "02" "02" "02" "04" "02" "03" "04"
#> HSPC_220 HSPC_226 HSPC_232 HSPC_238 HSPC_244 HSPC_250 LT-HSC_064 HSPC_214 HSPC_221
#> "02" "02" "02" "02" "03" "04" "011" "012" "03"
#> HSPC_227 HSPC_233 HSPC_239 HSPC_245 HSPC_251 LT-HSC_065 HSPC_215 HSPC_222 HSPC_228
#> "02" "04" "02" "02" "04" "03" "04" "04" "02"
#> HSPC_234 HSPC_240 HSPC_246 HSPC_252 LT-HSC_066 HSPC_216 Prog_217 Prog_223 Prog_229
#> "02" "03" "02" "02" "03" "012" "011" "04" "011"
#> Prog_235 Prog_241 Prog_247 LT-HSC_067 Prog_211 Prog_218 Prog_224 Prog_230 Prog_236
#> "02" "02" "03" "02" "011" "012" "013" "04" "012"
#> Prog_242 Prog_248 LT-HSC_068 Prog_212 Prog_219 Prog_225 Prog_231 Prog_237 Prog_243
#> "014" "04" "012" "014" "02" "03" "013" "04" "013"
#> Prog_249 LT-HSC_069 Prog_213 Prog_220 Prog_226 Prog_232 Prog_238 Prog_244 Prog_250
#> "011" "03" "04" "02" "03" "03" "012" "03" "014"
#> LT-HSC_070 Prog_214 Prog_221 Prog_227 Prog_233 Prog_239 Prog_245 Prog_251 LT-HSC_071
#> "04" "04" "011" "013" "012" "011" "012" "02" "03"
#> Prog_215 Prog_222 Prog_228 Prog_234 Prog_240 Prog_246 Prog_252 LT-HSC_072 Prog_216
#> "011" "03" "013" "012" "012" "03" "03" "012" "011"
#> HSPC_259 HSPC_265 HSPC_271 HSPC_277 HSPC_283 HSPC_289 LT-HSC_073 HSPC_253 HSPC_260
#> "02" "02" "04" "02" "02" "02" "02" "04" "02"
#> HSPC_266 HSPC_272 HSPC_278 HSPC_284 HSPC_290 LT-HSC_074 HSPC_254 HSPC_261 HSPC_267
#> "02" "02" "04" "02" "04" "02" "02" "013" "03"
#> HSPC_273 HSPC_279 HSPC_285 HSPC_291 LT-HSC_075 HSPC_255 HSPC_262 HSPC_268 HSPC_274
#> "02" "04" "012" "03" "03" "03" "02" "012" "02"
#> HSPC_280 HSPC_286 HSPC_292 LT-HSC_076 HSPC_256 HSPC_263 HSPC_269 HSPC_275 HSPC_281
#> "04" "04" "04" "04" "011" "04" "013" "013" "02"
#> HSPC_287 HSPC_293 LT-HSC_077 HSPC_257 HSPC_264 HSPC_270 HSPC_276 HSPC_282 HSPC_288
#> "04" "04" "02" "04" "02" "03" "03" "012" "012"
#> HSPC_294 LT-HSC_078 HSPC_258 Prog_259 Prog_265 Prog_271 Prog_277 Prog_283 Prog_289
#> "04" "02" "012" "03" "011" "03" "03" "04" "04"
#> LT-HSC_079 Prog_253 Prog_260 Prog_266 Prog_272 Prog_278 Prog_284 Prog_290 LT-HSC_080
#> "02" "014" "012" "012" "012" "011" "014" "011" "03"
#> Prog_254 Prog_261 Prog_267 Prog_273 Prog_279 Prog_285 Prog_291 LT-HSC_081 Prog_255
#> "011" "014" "013" "013" "011" "014" "04" "012" "012"
#> Prog_262 Prog_268 Prog_274 Prog_280 Prog_286 Prog_292 LT-HSC_082 Prog_256 Prog_263
#> "012" "012" "014" "03" "011" "012" "03" "04" "013"
#> Prog_269 Prog_275 Prog_281 Prog_287 Prog_293 LT-HSC_083 Prog_257 Prog_264 Prog_270
#> "011" "012" "014" "013" "03" "02" "02" "02" "013"
#> Prog_276 Prog_282 Prog_288 Prog_294 LT-HSC_084 Prog_258 HSPC_301 HSPC_307 HSPC_313
#> "012" "011" "011" "012" "03" "013" "02" "02" "04"
#> HSPC_319 HSPC_325 HSPC_331 LT-HSC_085 HSPC_295 HSPC_302 HSPC_308 HSPC_314 HSPC_320
#> "02" "02" "02" "02" "04" "02" "04" "04" "04"
#> HSPC_326 HSPC_332 LT-HSC_086 HSPC_296 HSPC_303 HSPC_309 HSPC_315 HSPC_321 HSPC_327
#> "02" "012" "04" "02" "012" "02" "02" "04" "012"
#> HSPC_333 LT-HSC_087 HSPC_297 HSPC_304 HSPC_310 HSPC_316 HSPC_322 HSPC_328 HSPC_334
#> "012" "02" "02" "03" "02" "02" "03" "04" "02"
#> LT-HSC_088 HSPC_298 HSPC_305 HSPC_311 HSPC_317 HSPC_323 HSPC_329 HSPC_335 LT-HSC_089
#> "04" "03" "04" "02" "02" "03" "04" "02" "02"
#> HSPC_299 HSPC_306 HSPC_312 HSPC_318 HSPC_324 HSPC_330 HSPC_336 LT-HSC_090 HSPC_300
#> "03" "03" "04" "02" "03" "03" "02" "03" "012"
#> Prog_301 Prog_307 Prog_313 Prog_319 Prog_325 Prog_331 LT-HSC_091 Prog_295 Prog_302
#> "04" "04" "04" "013" "012" "012" "011" "04" "02"
#> Prog_308 Prog_314 Prog_320 Prog_326 Prog_332 LT-HSC_092 Prog_296 Prog_303 Prog_309
#> "012" "03" "012" "011" "012" "02" "012" "02" "02"
#> Prog_315 Prog_321 Prog_327 Prog_333 LT-HSC_093 Prog_297 Prog_304 Prog_310 Prog_316
#> "04" "04" "012" "04" "04" "04" "012" "04" "04"
#> Prog_322 Prog_328 Prog_334 LT-HSC_094 Prog_298 Prog_305 Prog_311 Prog_317 Prog_323
#> "04" "04" "014" "04" "014" "04" "04" "02" "04"
#> Prog_329 Prog_335 LT-HSC_095 Prog_299 Prog_306 Prog_312 Prog_318 Prog_324 Prog_330
#> "04" "04" "011" "011" "02" "011" "011" "011" "013"
#> Prog_336 LT-HSC_096 Prog_300 HSPC_343 HSPC_349 HSPC_355 HSPC_361 HSPC_367 HSPC_373
#> "013" "012" "013" "013" "03" "02" "02" "02" "02"
#> LT-HSC_097 HSPC_337 HSPC_344 HSPC_350 HSPC_356 HSPC_362 HSPC_368 HSPC_374 LT-HSC_098
#> "02" "02" "04" "02" "04" "04" "04" "03" "011"
#> HSPC_338 HSPC_345 HSPC_351 HSPC_357 HSPC_363 HSPC_369 HSPC_375 LT-HSC_099 HSPC_339
#> "011" "04" "04" "02" "02" "02" "02" "02" "03"
#> HSPC_346 HSPC_352 HSPC_358 HSPC_364 HSPC_370 HSPC_376 LT-HSC_100 HSPC_340 HSPC_347
#> "012" "04" "04" "04" "013" "04" "011" "02" "02"
#> HSPC_353 HSPC_359 HSPC_365 HSPC_371 HSPC_377 LT-HSC_101 HSPC_341 HSPC_348 HSPC_354
#> "012" "03" "02" "012" "04" "04" "012" "03" "02"
#> HSPC_360 HSPC_366 HSPC_372 HSPC_378 LT-HSC_102 HSPC_342 Prog_343 Prog_349 Prog_355
#> "04" "02" "04" "02" "011" "013" "013" "04" "04"
#> Prog_361 Prog_367 Prog_373 LT-HSC_103 Prog_337 Prog_344 Prog_350 Prog_356 Prog_362
#> "014" "013" "011" "013" "011" "02" "014" "011" "04"
#> Prog_368 Prog_374 LT-HSC_104 Prog_338 Prog_345 Prog_351 Prog_357 Prog_363 Prog_369
#> "014" "014" "02" "012" "04" "014" "011" "014" "04"
#> Prog_375 LT-HSC_105 Prog_339 Prog_346 Prog_352 Prog_358 Prog_364 Prog_370 Prog_376
#> "011" "04" "011" "014" "011" "03" "011" "04" "011"
#> LT-HSC_106 Prog_340 Prog_347 Prog_353 Prog_359 Prog_365 Prog_371 Prog_377 LT-HSC_107
#> "04" "014" "02" "013" "011" "02" "012" "011" "02"
#> Prog_341 Prog_348 Prog_354 Prog_360 Prog_366 Prog_372 Prog_378 LT-HSC_108 Prog_342
#> "012" "02" "04" "011" "014" "011" "03" "012" "011"
#> HSPC_385 HSPC_391 HSPC_397 HSPC_403 HSPC_409 HSPC_415 HSPC_421 HSPC_379 HSPC_386
#> "02" "03" "02" "04" "02" "02" "04" "02" "04"
#> HSPC_392 HSPC_398 HSPC_404 HSPC_410 HSPC_416 HSPC_422 HSPC_380 HSPC_387 HSPC_393
#> "03" "03" "011" "012" "03" "03" "03" "04" "04"
#> HSPC_399 HSPC_405 HSPC_411 HSPC_417 HSPC_423 HSPC_381 HSPC_388 HSPC_394 HSPC_400
#> "03" "03" "012" "012" "012" "02" "012" "02" "04"
#> HSPC_406 HSPC_412 HSPC_418 HSPC_424 HSPC_382 HSPC_389 HSPC_395 HSPC_401 HSPC_407
#> "04" "013" "03" "04" "012" "014" "04" "02" "013"
#> HSPC_413 HSPC_419 HSPC_425 HSPC_383 HSPC_390 HSPC_396 HSPC_402 HSPC_408 HSPC_414
#> "04" "013" "04" "02" "04" "03" "03" "011" "02"
#> HSPC_420 HSPC_426 HSPC_384 Prog_385 Prog_391 Prog_397 Prog_403 Prog_409 Prog_415
#> "012" "04" "02" "011" "02" "011" "011" "011" "011"
#> Prog_421 Prog_379 Prog_386 Prog_392 Prog_398 Prog_404 Prog_410 Prog_416 Prog_422
#> "011" "011" "011" "012" "011" "011" "011" "011" "04"
#> Prog_380 Prog_387 Prog_393 Prog_399 Prog_405 Prog_411 Prog_417 Prog_423 Prog_381
#> "011" "013" "011" "012" "012" "04" "04" "04" "011"
#> Prog_388 Prog_394 Prog_400 Prog_406 Prog_412 Prog_418 Prog_424 Prog_382 Prog_389
#> "011" "03" "02" "011" "012" "014" "011" "03" "013"
#> Prog_395 Prog_401 Prog_407 Prog_413 Prog_419 Prog_425 Prog_383 Prog_390 Prog_396
#> "011" "013" "03" "012" "011" "014" "011" "04" "014"
#> Prog_402 Prog_408 Prog_414 Prog_420 Prog_426 Prog_384 HSPC_433 HSPC_439 HSPC_445
#> "04" "014" "013" "012" "012" "04" "02" "02" "02"
#> HSPC_451 HSPC_457 HSPC_463 LT-HSC_109 HSPC_427 HSPC_434 HSPC_440 HSPC_446 HSPC_452
#> "02" "02" "03" "02" "02" "02" "04" "02" "02"
#> HSPC_458 HSPC_464 LT-HSC_110 HSPC_428 HSPC_435 HSPC_441 HSPC_447 HSPC_453 HSPC_459
#> "02" "02" "03" "02" "03" "03" "03" "03" "03"
#> HSPC_465 LT-HSC_111 HSPC_429 HSPC_436 HSPC_442 HSPC_448 HSPC_454 HSPC_460 HSPC_466
#> "03" "02" "02" "013" "012" "03" "013" "03" "04"
#> LT-HSC_112 HSPC_430 HSPC_437 HSPC_443 HSPC_449 HSPC_455 HSPC_461 HSPC_467 LT-HSC_113
#> "03" "03" "02" "03" "03" "02" "04" "03" "03"
#> HSPC_431 HSPC_438 HSPC_444 HSPC_450 HSPC_456 HSPC_462 HSPC_468 LT-HSC_114 HSPC_432
#> "03" "02" "02" "02" "012" "03" "03" "02" "02"
#> Prog_433 Prog_439 Prog_445 Prog_451 Prog_457 Prog_463 LT-HSC_115 Prog_427 Prog_434
#> "03" "03" "03" "013" "014" "03" "012" "02" "011"
#> Prog_440 Prog_446 Prog_452 Prog_458 Prog_464 LT-HSC_116 Prog_428 Prog_435 Prog_441
#> "04" "03" "02" "04" "03" "03" "012" "04" "012"
#> Prog_447 Prog_453 Prog_459 Prog_465 LT-HSC_117 Prog_429 Prog_436 Prog_442 Prog_448
#> "012" "014" "03" "04" "03" "011" "012" "02" "03"
#> Prog_454 Prog_460 Prog_466 LT-HSC_118 Prog_430 Prog_437 Prog_443 Prog_449 Prog_455
#> "04" "04" "04" "02" "011" "013" "013" "011" "03"
#> Prog_461 Prog_467 LT-HSC_119 Prog_431 Prog_438 Prog_444 Prog_450 Prog_456 Prog_462
#> "02" "03" "02" "03" "02" "011" "012" "012" "04"
#> Prog_468 LT-HSC_120 Prog_432 HSPC_475 HSPC_481 HSPC_487 HSPC_493 HSPC_499 HSPC_505
#> "04" "04" "04" "02" "02" "02" "02" "02" "04"
#> LT-HSC_121 HSPC_469 HSPC_476 HSPC_482 HSPC_488 HSPC_494 HSPC_500 HSPC_506 LT-HSC_122
#> "02" "02" "02" "02" "02" "02" "02" "02" "04"
#> HSPC_470 HSPC_477 HSPC_483 HSPC_489 HSPC_495 HSPC_501 HSPC_507 LT-HSC_123 HSPC_471
#> "02" "012" "02" "04" "04" "02" "02" "02" "02"
#> HSPC_478 HSPC_484 HSPC_490 HSPC_496 HSPC_502 HSPC_508 LT-HSC_124 HSPC_472 HSPC_479
#> "02" "02" "03" "03" "03" "013" "03" "03" "03"
#> HSPC_485 HSPC_491 HSPC_497 HSPC_503 HSPC_509 LT-HSC_125 HSPC_473 HSPC_480 HSPC_486
#> "012" "04" "02" "012" "04" "03" "03" "03" "04"
#> HSPC_492 HSPC_498 HSPC_504 HSPC_510 LT-HSC_126 HSPC_474 Prog_475 Prog_481 Prog_487
#> "03" "03" "02" "04" "03" "03" "013" "03" "013"
#> Prog_493 Prog_499 Prog_505 LT-HSC_127 Prog_469 Prog_476 Prog_482 Prog_488 Prog_494
#> "012" "012" "013" "02" "04" "012" "012" "013" "04"
#> Prog_500 Prog_506 LT-HSC_128 Prog_470 Prog_477 Prog_483 Prog_489 Prog_495 Prog_501
#> "013" "012" "03" "012" "011" "04" "012" "03" "012"
#> Prog_507 LT-HSC_129 Prog_471 Prog_478 Prog_484 Prog_490 Prog_496 Prog_502 Prog_508
#> "04" "02" "012" "011" "012" "04" "03" "011" "011"
#> LT-HSC_130 Prog_472 Prog_479 Prog_485 Prog_491 Prog_497 Prog_503 Prog_509 LT-HSC_131
#> "013" "04" "012" "013" "013" "04" "04" "03" "03"
#> Prog_473 Prog_480 Prog_486 Prog_492 Prog_498 Prog_504 Prog_510 LT-HSC_132 Prog_474
#> "012" "02" "012" "03" "02" "012" "04" "014" "03"
#> HSPC_517 HSPC_523 HSPC_529 HSPC_535 HSPC_541 HSPC_547 LT-HSC_133 HSPC_511 HSPC_518
#> "02" "03" "02" "02" "02" "03" "02" "02" "02"
#> HSPC_524 HSPC_530 HSPC_536 HSPC_542 HSPC_548 LT-HSC_134 HSPC_512 HSPC_519 HSPC_525
#> "02" "02" "02" "02" "02" "02" "03" "02" "02"
#> HSPC_531 HSPC_537 HSPC_543 HSPC_549 LT-HSC_135 HSPC_513 HSPC_520 HSPC_526 HSPC_532
#> "02" "04" "04" "02" "02" "02" "04" "03" "04"
#> HSPC_538 HSPC_544 HSPC_550 LT-HSC_136 HSPC_514 HSPC_521 HSPC_527 HSPC_533 HSPC_539
#> "03" "012" "04" "02" "03" "02" "012" "03" "02"
#> HSPC_545 HSPC_551 LT-HSC_137 HSPC_515 HSPC_522 HSPC_528 HSPC_534 HSPC_540 HSPC_546
#> "02" "04" "02" "03" "02" "04" "03" "03" "02"
#> HSPC_552 LT-HSC_138 HSPC_516 Prog_517 Prog_523 Prog_529 Prog_535 Prog_541 Prog_547
#> "04" "02" "03" "03" "011" "013" "011" "013" "013"
#> LT-HSC_139 Prog_511 Prog_518 Prog_524 Prog_530 Prog_536 Prog_542 Prog_548 LT-HSC_140
#> "03" "03" "04" "04" "012" "011" "04" "011" "02"
#> Prog_512 Prog_519 Prog_525 Prog_531 Prog_537 Prog_543 Prog_549 LT-HSC_141 Prog_513
#> "04" "04" "04" "013" "02" "014" "04" "02" "03"
#> Prog_520 Prog_526 Prog_532 Prog_538 Prog_544 Prog_550 LT-HSC_142 Prog_514 Prog_521
#> "013" "02" "02" "02" "02" "012" "012" "012" "012"
#> Prog_527 Prog_533 Prog_539 Prog_545 Prog_551 LT-HSC_143 Prog_515 Prog_522 Prog_528
#> "012" "02" "04" "014" "012" "013" "04" "02" "014"
#> Prog_534 Prog_540 Prog_546 Prog_552 LT-HSC_144 Prog_516 HSPC_559 HSPC_565 HSPC_571
#> "04" "02" "02" "04" "04" "011" "02" "02" "03"
#> HSPC_577 HSPC_583 HSPC_589 LT-HSC_145 HSPC_553 HSPC_560 HSPC_566 HSPC_572 HSPC_578
#> "02" "02" "02" "02" "013" "02" "02" "02" "02"
#> HSPC_584 HSPC_590 LT-HSC_146 HSPC_554 HSPC_561 HSPC_567 HSPC_573 HSPC_579 HSPC_585
#> "02" "04" "03" "02" "02" "03" "02" "03" "02"
#> HSPC_591 LT-HSC_147 HSPC_555 HSPC_562 HSPC_568 HSPC_574 HSPC_580 HSPC_586 HSPC_592
#> "02" "02" "02" "02" "02" "012" "03" "03" "03"
#> LT-HSC_148 HSPC_556 HSPC_563 HSPC_569 HSPC_575 HSPC_581 HSPC_587 HSPC_593 LT-HSC_149
#> "04" "03" "03" "04" "03" "02" "02" "02" "02"
#> HSPC_557 HSPC_564 HSPC_570 HSPC_576 HSPC_582 HSPC_588 HSPC_594 LT-HSC_150 HSPC_558
#> "03" "02" "02" "02" "02" "02" "02" "02" "02"
#> Prog_559 Prog_565 Prog_571 Prog_577 Prog_583 Prog_589 LT-HSC_151 Prog_553 Prog_560
#> "012" "012" "012" "012" "02" "02" "03" "04" "012"
#> Prog_566 Prog_572 Prog_578 Prog_584 Prog_590 LT-HSC_152 Prog_554 Prog_561 Prog_567
#> "014" "03" "04" "012" "012" "02" "03" "04" "012"
#> Prog_573 Prog_579 Prog_585 Prog_591 LT-HSC_153 Prog_555 Prog_562 Prog_568 Prog_574
#> "02" "012" "03" "02" "02" "03" "011" "03" "012"
#> Prog_580 Prog_586 Prog_592 LT-HSC_154 Prog_556 Prog_563 Prog_569 Prog_575 Prog_581
#> "03" "04" "011" "02" "03" "02" "013" "011" "012"
#> Prog_587 Prog_593 LT-HSC_155 Prog_557 Prog_564 Prog_570 Prog_576 Prog_582 Prog_588
#> "013" "012" "02" "012" "03" "04" "014" "012" "03"
#> Prog_594 LT-HSC_156 Prog_558 HSPC_601 HSPC_607 HSPC_613 HSPC_619 HSPC_625 HSPC_631
#> "03" "012" "03" "04" "02" "04" "02" "02" "04"
#> LT-HSC_157 HSPC_595 HSPC_602 HSPC_608 HSPC_614 HSPC_620 HSPC_626 HSPC_632 LT-HSC_158
#> "02" "03" "02" "02" "04" "02" "02" "02" "02"
#> HSPC_596 HSPC_603 HSPC_609 HSPC_615 HSPC_621 HSPC_627 HSPC_633 LT-HSC_159 HSPC_597
#> "04" "03" "02" "02" "02" "04" "02" "04" "04"
#> HSPC_604 HSPC_610 HSPC_616 HSPC_622 HSPC_628 HSPC_634 LT-HSC_160 HSPC_598 HSPC_605
#> "02" "02" "02" "02" "04" "04" "02" "04" "02"
#> HSPC_611 HSPC_617 HSPC_623 HSPC_629 HSPC_635 LT-HSC_161 HSPC_599 HSPC_606 HSPC_612
#> "02" "03" "04" "04" "04" "02" "02" "03" "03"
#> HSPC_618 HSPC_624 HSPC_630 HSPC_636 LT-HSC_162 HSPC_600 Prog_601 Prog_607 Prog_613
#> "02" "03" "02" "03" "02" "02" "02" "012" "03"
#> Prog_619 Prog_625 Prog_631 LT-HSC_163 Prog_595 Prog_602 Prog_608 Prog_614 Prog_620
#> "02" "04" "03" "02" "02" "013" "011" "013" "04"
#> Prog_626 Prog_632 LT-HSC_164 Prog_596 Prog_603 Prog_609 Prog_615 Prog_621 Prog_627
#> "012" "012" "03" "03" "011" "012" "04" "012" "03"
#> Prog_633 LT-HSC_165 Prog_597 Prog_604 Prog_610 Prog_616 Prog_622 Prog_628 Prog_634
#> "04" "02" "03" "03" "03" "011" "012" "012" "04"
#> LT-HSC_166 Prog_598 Prog_605 Prog_611 Prog_617 Prog_623 Prog_629 Prog_635 LT-HSC_167
#> "04" "012" "014" "03" "03" "013" "012" "03" "02"
#> Prog_599 Prog_606 Prog_612 Prog_618 Prog_624 Prog_630 Prog_636 LT-HSC_168 Prog_600
#> "012" "03" "013" "012" "012" "013" "02" "013" "012"
#> HSPC_643 HSPC_649 HSPC_655 HSPC_661 HSPC_667 HSPC_673 LT-HSC_169 HSPC_637 HSPC_644
#> "04" "03" "02" "04" "02" "02" "02" "03" "013"
#> HSPC_650 HSPC_656 HSPC_662 HSPC_668 HSPC_674 LT-HSC_170 HSPC_638 HSPC_645 HSPC_651
#> "02" "02" "02" "03" "03" "04" "013" "03" "04"
#> HSPC_657 HSPC_663 HSPC_669 HSPC_675 LT-HSC_171 HSPC_639 HSPC_646 HSPC_652 HSPC_658
#> "02" "04" "02" "02" "04" "03" "03" "04" "04"
#> HSPC_664 HSPC_670 HSPC_676 LT-HSC_172 HSPC_640 HSPC_647 HSPC_653 HSPC_659 HSPC_665
#> "03" "02" "02" "02" "03" "02" "02" "02" "04"
#> HSPC_671 HSPC_677 LT-HSC_173 HSPC_641 HSPC_648 HSPC_654 HSPC_660 HSPC_666 HSPC_672
#> "03" "02" "02" "03" "02" "04" "04" "04" "03"
#> HSPC_678 LT-HSC_174 HSPC_642 Prog_643 Prog_649 Prog_655 Prog_661 Prog_667 Prog_673
#> "02" "03" "02" "04" "011" "011" "013" "04" "04"
#> LT-HSC_175 Prog_637 Prog_644 Prog_650 Prog_656 Prog_662 Prog_668 Prog_674 LT-HSC_176
#> "02" "014" "03" "012" "03" "03" "02" "03" "02"
#> Prog_638 Prog_645 Prog_651 Prog_657 Prog_663 Prog_669 Prog_675 LT-HSC_177 Prog_639
#> "011" "04" "03" "011" "011" "02" "012" "02" "014"
#> Prog_646 Prog_652 Prog_658 Prog_664 Prog_670 Prog_676 LT-HSC_178 Prog_640 Prog_647
#> "012" "012" "012" "02" "012" "03" "02" "011" "04"
#> Prog_653 Prog_659 Prog_665 Prog_671 Prog_677 LT-HSC_179 Prog_641 Prog_648 Prog_654
#> "04" "03" "03" "03" "011" "03" "02" "04" "013"
#> Prog_660 Prog_666 Prog_672 Prog_678 LT-HSC_180 Prog_642 HSPC_685 HSPC_691 HSPC_697
#> "03" "03" "03" "04" "04" "03" "02" "02" "04"
#> HSPC_703 HSPC_709 HSPC_715 LT-HSC_181 HSPC_679 HSPC_686 HSPC_692 HSPC_698 HSPC_704
#> "02" "02" "02" "02" "03" "02" "02" "02" "02"
#> HSPC_710 HSPC_716 LT-HSC_182 HSPC_680 HSPC_687 HSPC_693 HSPC_699 HSPC_705 HSPC_711
#> "02" "02" "02" "02" "02" "02" "02" "012" "02"
#> HSPC_717 LT-HSC_183 HSPC_681 HSPC_688 HSPC_694 HSPC_700 HSPC_706 HSPC_712 HSPC_718
#> "04" "03" "04" "02" "02" "04" "03" "02" "02"
#> LT-HSC_184 HSPC_682 HSPC_689 HSPC_695 HSPC_701 HSPC_707 HSPC_713 HSPC_719 LT-HSC_185
#> "03" "012" "02" "013" "04" "04" "02" "02" "02"
#> HSPC_683 HSPC_690 HSPC_696 HSPC_702 HSPC_708 HSPC_714 HSPC_720 LT-HSC_186 HSPC_684
#> "04" "02" "04" "02" "03" "02" "012" "02" "02"
#> Prog_685 Prog_691 Prog_697 Prog_703 Prog_709 Prog_715 LT-HSC_187 Prog_679 Prog_686
#> "012" "02" "011" "04" "014" "012" "03" "012" "04"
#> Prog_692 Prog_698 Prog_704 Prog_710 Prog_716 LT-HSC_188 Prog_680 Prog_687 Prog_693
#> "03" "013" "03" "03" "03" "03" "012" "012" "012"
#> Prog_699 Prog_705 Prog_711 Prog_717 LT-HSC_189 Prog_681 Prog_688 Prog_694 Prog_700
#> "012" "012" "03" "012" "02" "013" "011" "03" "011"
#> Prog_706 Prog_712 Prog_718 LT-HSC_190 Prog_682 Prog_689 Prog_695 Prog_701 Prog_707
#> "013" "013" "012" "02" "013" "03" "011" "011" "03"
#> Prog_713 Prog_719 LT-HSC_191 Prog_683 Prog_690 Prog_696 Prog_702 Prog_708 Prog_714
#> "013" "011" "03" "02" "03" "04" "014" "014" "014"
#> Prog_720 LT-HSC_192 Prog_684 HSPC_727 HSPC_733 HSPC_739 HSPC_745 HSPC_751 HSPC_757
#> "014" "012" "03" "02" "02" "02" "02" "02" "02"
#> LT-HSC_193 HSPC_721 HSPC_728 HSPC_734 HSPC_740 HSPC_746 HSPC_752 HSPC_758 LT-HSC_194
#> "02" "02" "02" "012" "02" "02" "02" "03" "02"
#> HSPC_722 HSPC_729 HSPC_735 HSPC_741 HSPC_747 HSPC_753 HSPC_759 LT-HSC_195 HSPC_723
#> "03" "03" "04" "02" "02" "03" "03" "03" "03"
#> HSPC_730 HSPC_736 HSPC_742 HSPC_748 HSPC_754 HSPC_760 LT-HSC_196 HSPC_724 HSPC_731
#> "03" "03" "03" "02" "02" "04" "02" "03" "04"
#> HSPC_737 HSPC_743 HSPC_749 HSPC_755 HSPC_761 LT-HSC_197 HSPC_725 HSPC_732 HSPC_738
#> "012" "03" "02" "03" "03" "02" "02" "03" "02"
#> HSPC_744 HSPC_750 HSPC_756 HSPC_762 LT-HSC_198 HSPC_726 Prog_727 Prog_733 Prog_739
#> "04" "03" "02" "04" "02" "02" "012" "03" "04"
#> Prog_745 Prog_751 Prog_757 LT-HSC_199 Prog_721 Prog_728 Prog_734 Prog_740 Prog_746
#> "03" "03" "04" "02" "014" "03" "014" "03" "04"
#> Prog_752 Prog_758 LT-HSC_200 Prog_722 Prog_729 Prog_735 Prog_741 Prog_747 Prog_753
#> "03" "03" "02" "014" "02" "012" "02" "03" "013"
#> Prog_759 LT-HSC_201 Prog_723 Prog_730 Prog_736 Prog_742 Prog_748 Prog_754 Prog_760
#> "012" "02" "011" "011" "013" "02" "04" "013" "012"
#> LT-HSC_202 Prog_724 Prog_731 Prog_737 Prog_743 Prog_749 Prog_755 Prog_761 LT-HSC_203
#> "03" "03" "011" "03" "012" "04" "02" "04" "02"
#> Prog_725 Prog_732 Prog_738 Prog_744 Prog_750 Prog_756 Prog_762 LT-HSC_204 Prog_726
#> "03" "04" "03" "03" "04" "04" "03" "03" "03"
#> HSPC_769 HSPC_775 HSPC_781 HSPC_787 HSPC_793 HSPC_799 LT-HSC_205 HSPC_763 HSPC_770
#> "02" "02" "02" "02" "02" "02" "02" "02" "04"
#> HSPC_776 HSPC_782 HSPC_788 HSPC_794 HSPC_800 LT-HSC_206 HSPC_764 HSPC_771 HSPC_777
#> "02" "02" "02" "03" "04" "02" "02" "03" "03"
#> HSPC_783 HSPC_789 HSPC_795 HSPC_801 LT-HSC_207 HSPC_765 HSPC_772 HSPC_778 HSPC_784
#> "02" "04" "03" "03" "04" "02" "04" "03" "03"
#> HSPC_790 HSPC_796 HSPC_802 LT-HSC_208 HSPC_766 HSPC_773 HSPC_779 HSPC_785 HSPC_791
#> "04" "012" "02" "02" "012" "03" "04" "03" "04"
#> HSPC_797 HSPC_803 LT-HSC_209 HSPC_767 HSPC_774 HSPC_780 HSPC_786 HSPC_792 HSPC_798
#> "03" "02" "02" "012" "03" "03" "03" "02" "02"
#> HSPC_804 LT-HSC_210 HSPC_768 Prog_769 Prog_775 Prog_781 Prog_787 Prog_793 Prog_799
#> "02" "02" "02" "012" "03" "012" "04" "013" "03"
#> LT-HSC_211 Prog_763 Prog_770 Prog_776 Prog_782 Prog_788 Prog_794 Prog_800 LT-HSC_212
#> "04" "012" "014" "011" "012" "011" "012" "012" "03"
#> Prog_764 Prog_771 Prog_777 Prog_783 Prog_789 Prog_795 Prog_801 LT-HSC_213 Prog_765
#> "012" "014" "012" "014" "012" "012" "013" "02" "013"
#> Prog_772 Prog_778 Prog_784 Prog_790 Prog_796 Prog_802 LT-HSC_214 Prog_766 Prog_773
#> "012" "02" "03" "011" "04" "014" "03" "02" "02"
#> Prog_779 Prog_785 Prog_791 Prog_797 Prog_803 LT-HSC_215 Prog_767 Prog_774 Prog_780
#> "013" "03" "012" "03" "04" "03" "011" "012" "011"
#> Prog_786 Prog_792 Prog_798 Prog_804 LT-HSC_216 Prog_768 HSPC_811 HSPC_817 HSPC_823
#> "011" "013" "013" "012" "04" "012" "02" "02" "02"
#> HSPC_829 HSPC_835 HSPC_841 HSPC_847 HSPC_805 HSPC_812 HSPC_818 HSPC_824 HSPC_830
#> "02" "03" "04" "02" "02" "012" "03" "03" "02"
#> HSPC_836 HSPC_842 HSPC_848 HSPC_806 HSPC_813 HSPC_819 HSPC_825 HSPC_831 HSPC_837
#> "02" "02" "02" "02" "012" "04" "03" "03" "04"
#> HSPC_843 HSPC_849 HSPC_807 HSPC_814 HSPC_820 HSPC_826 HSPC_832 HSPC_838 HSPC_844
#> "03" "02" "012" "04" "012" "03" "03" "03" "02"
#> HSPC_850 HSPC_808 HSPC_815 HSPC_821 HSPC_827 HSPC_833 HSPC_839 HSPC_845 HSPC_851
#> "02" "012" "03" "04" "02" "012" "04" "03" "02"
#> HSPC_809 HSPC_816 HSPC_822 HSPC_828 HSPC_834 HSPC_840 HSPC_846 HSPC_852 HSPC_810
#> "02" "04" "03" "03" "03" "02" "04" "02" "02"
#> Prog_811 Prog_817 Prog_823 Prog_829 Prog_835 Prog_841 Prog_847 Prog_805 Prog_812
#> "014" "013" "03" "012" "014" "04" "012" "04" "02"
#> Prog_818 Prog_824 Prog_830 Prog_836 Prog_842 Prog_848 Prog_806 Prog_813 Prog_819
#> "014" "012" "011" "013" "014" "02" "03" "011" "011"
#> Prog_825 Prog_831 Prog_837 Prog_843 Prog_849 Prog_807 Prog_814 Prog_820 Prog_826
#> "011" "014" "014" "013" "04" "014" "011" "013" "011"
#> Prog_832 Prog_838 Prog_844 Prog_850 Prog_808 Prog_815 Prog_821 Prog_827 Prog_833
#> "012" "011" "014" "014" "012" "014" "011" "03" "012"
#> Prog_839 Prog_845 Prog_851 Prog_809 Prog_816 Prog_822 Prog_828 Prog_834 Prog_840
#> "013" "013" "03" "013" "012" "011" "011" "012" "012"
#> Prog_846 Prog_852 Prog_810
#> "012" "04" "013"
get_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 12685))
#> HSPC_007 HSPC_013 HSPC_019 HSPC_025 HSPC_031 HSPC_037 LT-HSC_001 HSPC_001 HSPC_008
#> NA NA NA NA NA NA NA NA NA
#> HSPC_014 HSPC_020 HSPC_026 HSPC_032 HSPC_038 LT-HSC_002 HSPC_002 HSPC_009 HSPC_015
#> NA NA NA NA NA NA NA NA NA
#> HSPC_021 HSPC_027 HSPC_033 HSPC_039 LT-HSC_003 HSPC_003 HSPC_010 HSPC_016 HSPC_022
#> NA NA NA NA NA NA NA NA NA
#> HSPC_028 HSPC_034 HSPC_040 LT-HSC_004 HSPC_004 HSPC_011 HSPC_017 HSPC_023 HSPC_029
#> NA NA NA NA NA NA NA NA NA
#> HSPC_035 HSPC_041 LT-HSC_005 HSPC_005 HSPC_012 HSPC_018 HSPC_024 HSPC_030 HSPC_036
#> NA NA NA NA NA NA NA NA NA
#> HSPC_042 LT-HSC_006 HSPC_006 Prog_007 Prog_013 Prog_019 Prog_025 Prog_031 Prog_037
#> NA NA NA NA NA NA NA NA NA
#> LT-HSC_007 Prog_001 Prog_008 Prog_014 Prog_020 Prog_026 Prog_032 Prog_038 LT-HSC_008
#> NA NA NA NA NA NA NA NA NA
#> Prog_002 Prog_009 Prog_015 Prog_021 Prog_027 Prog_033 Prog_039 LT-HSC_009 Prog_003
#> NA NA NA NA NA NA NA NA NA
#> Prog_010 Prog_016 Prog_022 Prog_028 Prog_034 Prog_040 LT-HSC_010 Prog_004 Prog_011
#> NA NA NA NA NA NA NA NA NA
#> Prog_017 Prog_023 Prog_029 Prog_035 Prog_041 LT-HSC_011 Prog_005 Prog_012 Prog_018
#> NA NA NA NA NA NA NA NA NA
#> Prog_024 Prog_030 Prog_036 Prog_042 LT-HSC_012 Prog_006 HSPC_049 HSPC_055 HSPC_061
#> NA NA NA NA NA NA NA NA NA
#> HSPC_067 HSPC_073 HSPC_079 LT-HSC_013 HSPC_043 HSPC_050 HSPC_056 HSPC_062 HSPC_068
#> NA NA NA NA NA NA NA NA NA
#> HSPC_074 HSPC_080 LT-HSC_014 HSPC_044 HSPC_051 HSPC_057 HSPC_063 HSPC_069 HSPC_075
#> NA NA NA NA NA NA NA NA NA
#> HSPC_081 LT-HSC_015 HSPC_045 HSPC_052 HSPC_058 HSPC_064 HSPC_070 HSPC_076 HSPC_082
#> NA NA NA NA NA NA NA NA NA
#> LT-HSC_016 HSPC_046 HSPC_053 HSPC_059 HSPC_065 HSPC_071 HSPC_077 HSPC_083 LT-HSC_017
#> NA NA NA NA NA NA NA NA NA
#> HSPC_047 HSPC_054 HSPC_060 HSPC_066 HSPC_072 HSPC_078 HSPC_084 LT-HSC_018 HSPC_048
#> NA NA NA NA NA NA NA NA NA
#> Prog_049 Prog_055 Prog_061 Prog_067 Prog_073 Prog_079 LT-HSC_019 Prog_043 Prog_050
#> NA NA NA NA NA NA NA NA NA
#> Prog_056 Prog_062 Prog_068 Prog_074 Prog_080 LT-HSC_020 Prog_044 Prog_051 Prog_057
#> NA NA NA NA NA NA NA NA NA
#> Prog_063 Prog_069 Prog_075 Prog_081 LT-HSC_021 Prog_045 Prog_052 Prog_058 Prog_064
#> NA NA NA NA NA NA NA NA NA
#> Prog_070 Prog_076 Prog_082 LT-HSC_022 Prog_046 Prog_053 Prog_059 Prog_065 Prog_071
#> NA NA NA NA NA NA NA NA NA
#> Prog_077 Prog_083 LT-HSC_023 Prog_047 Prog_054 Prog_060 Prog_066 Prog_072 Prog_078
#> NA NA NA NA NA NA NA NA NA
#> Prog_084 LT-HSC_024 Prog_048 HSPC_091 HSPC_097 HSPC_103 HSPC_109 HSPC_115 HSPC_121
#> NA NA NA NA NA NA NA NA NA
#> LT-HSC_025 HSPC_085 HSPC_092 HSPC_098 HSPC_104 HSPC_110 HSPC_116 HSPC_122 LT-HSC_026
#> NA NA NA NA NA NA NA NA NA
#> HSPC_086 HSPC_093 HSPC_099 HSPC_105 HSPC_111 HSPC_117 HSPC_123 LT-HSC_027 HSPC_087
#> NA NA NA NA NA NA NA NA NA
#> HSPC_094 HSPC_100 HSPC_106 HSPC_112 HSPC_118 HSPC_124 LT-HSC_028 HSPC_088 HSPC_095
#> NA NA NA NA NA NA NA NA NA
#> HSPC_101 HSPC_107 HSPC_113 HSPC_119 HSPC_125 LT-HSC_029 HSPC_089 HSPC_096 HSPC_102
#> NA NA NA NA NA NA NA NA NA
#> HSPC_108 HSPC_114 HSPC_120 HSPC_126 LT-HSC_030 HSPC_090 Prog_091 Prog_097 Prog_103
#> NA NA NA NA NA NA NA NA NA
#> Prog_109 Prog_115 Prog_121 LT-HSC_031 Prog_085 Prog_092 Prog_098 Prog_104 Prog_110
#> NA NA NA NA NA NA NA NA NA
#> Prog_116 Prog_122 LT-HSC_032 Prog_086 Prog_093 Prog_099 Prog_105 Prog_111 Prog_117
#> NA NA NA NA NA NA NA NA NA
#> Prog_123 LT-HSC_033 Prog_087 Prog_094 Prog_100 Prog_106 Prog_112 Prog_118 Prog_124
#> NA NA NA NA NA NA NA NA NA
#> LT-HSC_034 Prog_088 Prog_095 Prog_101 Prog_107 Prog_113 Prog_119 Prog_125 LT-HSC_035
#> NA NA NA NA NA NA NA NA NA
#> Prog_089 Prog_096 Prog_102 Prog_108 Prog_114 Prog_120 Prog_126 LT-HSC_036 Prog_090
#> NA NA NA NA NA NA NA NA NA
#> HSPC_133 HSPC_139 HSPC_145 HSPC_151 HSPC_157 HSPC_163 LT-HSC_037 HSPC_127 HSPC_134
#> NA NA NA NA NA NA NA NA NA
#> HSPC_140 HSPC_146 HSPC_152 HSPC_158 HSPC_164 LT-HSC_038 HSPC_128 HSPC_135 HSPC_141
#> NA NA NA NA NA NA NA NA NA
#> HSPC_147 HSPC_153 HSPC_159 HSPC_165 LT-HSC_039 HSPC_129 HSPC_136 HSPC_142 HSPC_148
#> NA NA NA NA NA NA NA NA NA
#> HSPC_154 HSPC_160 HSPC_166 LT-HSC_040 HSPC_130 HSPC_137 HSPC_143 HSPC_149 HSPC_155
#> NA NA NA NA NA NA NA NA NA
#> HSPC_161 HSPC_167 LT-HSC_041 HSPC_131 HSPC_138 HSPC_144 HSPC_150 HSPC_156 HSPC_162
#> NA NA NA NA NA NA NA NA NA
#> HSPC_168 LT-HSC_042 HSPC_132 Prog_133 Prog_139 Prog_145 Prog_151 Prog_157 Prog_163
#> NA NA NA NA NA NA NA NA NA
#> LT-HSC_043 Prog_127 Prog_134 Prog_140 Prog_146 Prog_152 Prog_158 Prog_164 LT-HSC_044
#> NA NA NA NA NA NA NA NA NA
#> Prog_128 Prog_135 Prog_141 Prog_147 Prog_153 Prog_159 Prog_165 LT-HSC_045 Prog_129
#> NA NA NA NA NA NA NA NA NA
#> Prog_136 Prog_142 Prog_148 Prog_154 Prog_160 Prog_166 LT-HSC_046 Prog_130 Prog_137
#> NA NA NA NA NA NA NA NA NA
#> Prog_143 Prog_149 Prog_155 Prog_161 Prog_167 LT-HSC_047 Prog_131 Prog_138 Prog_144
#> NA NA NA NA NA NA NA NA NA
#> Prog_150 Prog_156 Prog_162 Prog_168 LT-HSC_048 Prog_132 HSPC_175 HSPC_181 HSPC_187
#> NA NA NA NA NA NA NA NA NA
#> HSPC_193 HSPC_199 HSPC_205 LT-HSC_049 HSPC_169 HSPC_176 HSPC_182 HSPC_188 HSPC_194
#> NA NA NA NA NA NA NA NA NA
#> HSPC_200 HSPC_206 LT-HSC_050 HSPC_170 HSPC_177 HSPC_183 HSPC_189 HSPC_195 HSPC_201
#> NA NA NA NA NA NA NA NA NA
#> HSPC_207 LT-HSC_051 HSPC_171 HSPC_178 HSPC_184 HSPC_190 HSPC_196 HSPC_202 HSPC_208
#> NA NA NA NA NA NA NA NA NA
#> LT-HSC_052 HSPC_172 HSPC_179 HSPC_185 HSPC_191 HSPC_197 HSPC_203 HSPC_209 LT-HSC_053
#> NA NA NA NA NA NA NA NA NA
#> HSPC_173 HSPC_180 HSPC_186 HSPC_192 HSPC_198 HSPC_204 HSPC_210 LT-HSC_054 HSPC_174
#> NA NA NA NA NA NA NA NA NA
#> Prog_175 Prog_181 Prog_187 Prog_193 Prog_199 Prog_205 LT-HSC_055 Prog_169 Prog_176
#> NA NA NA NA NA NA NA NA NA
#> Prog_182 Prog_188 Prog_194 Prog_200 Prog_206 LT-HSC_056 Prog_170 Prog_177 Prog_183
#> NA NA NA NA NA NA NA NA NA
#> Prog_189 Prog_195 Prog_201 Prog_207 LT-HSC_057 Prog_171 Prog_178 Prog_184 Prog_190
#> NA NA NA NA NA NA NA NA NA
#> Prog_196 Prog_202 Prog_208 LT-HSC_058 Prog_172 Prog_179 Prog_185 Prog_191 Prog_197
#> NA NA NA NA NA NA NA NA NA
#> Prog_203 Prog_209 LT-HSC_059 Prog_173 Prog_180 Prog_186 Prog_192 Prog_198 Prog_204
#> NA NA NA NA NA NA NA NA NA
#> Prog_210 LT-HSC_060 Prog_174 HSPC_217 HSPC_223 HSPC_229 HSPC_235 HSPC_241 HSPC_247
#> NA NA NA NA NA NA NA NA NA
#> LT-HSC_061 HSPC_211 HSPC_218 HSPC_224 HSPC_230 HSPC_236 HSPC_242 HSPC_248 LT-HSC_062
#> NA NA NA NA NA NA NA NA NA
#> HSPC_212 HSPC_219 HSPC_225 HSPC_231 HSPC_237 HSPC_243 HSPC_249 LT-HSC_063 HSPC_213
#> NA NA NA NA NA NA NA NA NA
#> HSPC_220 HSPC_226 HSPC_232 HSPC_238 HSPC_244 HSPC_250 LT-HSC_064 HSPC_214 HSPC_221
#> NA NA NA NA NA NA NA NA NA
#> HSPC_227 HSPC_233 HSPC_239 HSPC_245 HSPC_251 LT-HSC_065 HSPC_215 HSPC_222 HSPC_228
#> NA NA NA NA NA NA NA NA NA
#> HSPC_234 HSPC_240 HSPC_246 HSPC_252 LT-HSC_066 HSPC_216 Prog_217 Prog_223 Prog_229
#> NA NA NA NA NA NA NA NA NA
#> Prog_235 Prog_241 Prog_247 LT-HSC_067 Prog_211 Prog_218 Prog_224 Prog_230 Prog_236
#> NA NA NA NA NA NA NA NA NA
#> Prog_242 Prog_248 LT-HSC_068 Prog_212 Prog_219 Prog_225 Prog_231 Prog_237 Prog_243
#> NA NA NA NA NA NA NA NA NA
#> Prog_249 LT-HSC_069 Prog_213 Prog_220 Prog_226 Prog_232 Prog_238 Prog_244 Prog_250
#> NA NA NA NA NA NA NA NA NA
#> LT-HSC_070 Prog_214 Prog_221 Prog_227 Prog_233 Prog_239 Prog_245 Prog_251 LT-HSC_071
#> NA NA NA NA NA NA NA NA NA
#> Prog_215 Prog_222 Prog_228 Prog_234 Prog_240 Prog_246 Prog_252 LT-HSC_072 Prog_216
#> NA NA NA NA NA NA NA NA NA
#> HSPC_259 HSPC_265 HSPC_271 HSPC_277 HSPC_283 HSPC_289 LT-HSC_073 HSPC_253 HSPC_260
#> NA NA NA NA NA NA NA NA NA
#> HSPC_266 HSPC_272 HSPC_278 HSPC_284 HSPC_290 LT-HSC_074 HSPC_254 HSPC_261 HSPC_267
#> NA NA NA NA NA NA NA NA NA
#> HSPC_273 HSPC_279 HSPC_285 HSPC_291 LT-HSC_075 HSPC_255 HSPC_262 HSPC_268 HSPC_274
#> NA NA NA NA NA NA NA NA NA
#> HSPC_280 HSPC_286 HSPC_292 LT-HSC_076 HSPC_256 HSPC_263 HSPC_269 HSPC_275 HSPC_281
#> NA NA NA NA NA NA NA NA NA
#> HSPC_287 HSPC_293 LT-HSC_077 HSPC_257 HSPC_264 HSPC_270 HSPC_276 HSPC_282 HSPC_288
#> NA NA NA NA NA NA NA NA NA
#> HSPC_294 LT-HSC_078 HSPC_258 Prog_259 Prog_265 Prog_271 Prog_277 Prog_283 Prog_289
#> NA NA NA NA NA NA NA NA NA
#> LT-HSC_079 Prog_253 Prog_260 Prog_266 Prog_272 Prog_278 Prog_284 Prog_290 LT-HSC_080
#> NA NA NA NA NA NA NA NA NA
#> Prog_254 Prog_261 Prog_267 Prog_273 Prog_279 Prog_285 Prog_291 LT-HSC_081 Prog_255
#> NA NA NA NA NA NA NA NA NA
#> Prog_262 Prog_268 Prog_274 Prog_280 Prog_286 Prog_292 LT-HSC_082 Prog_256 Prog_263
#> NA NA NA NA NA NA NA NA NA
#> Prog_269 Prog_275 Prog_281 Prog_287 Prog_293 LT-HSC_083 Prog_257 Prog_264 Prog_270
#> NA NA NA NA NA NA NA NA NA
#> Prog_276 Prog_282 Prog_288 Prog_294 LT-HSC_084 Prog_258 HSPC_301 HSPC_307 HSPC_313
#> NA NA NA NA NA NA NA NA NA
#> HSPC_319 HSPC_325 HSPC_331 LT-HSC_085 HSPC_295 HSPC_302 HSPC_308 HSPC_314 HSPC_320
#> NA NA NA NA NA NA NA NA NA
#> HSPC_326 HSPC_332 LT-HSC_086 HSPC_296 HSPC_303 HSPC_309 HSPC_315 HSPC_321 HSPC_327
#> NA NA NA NA NA NA NA NA NA
#> HSPC_333 LT-HSC_087 HSPC_297 HSPC_304 HSPC_310 HSPC_316 HSPC_322 HSPC_328 HSPC_334
#> NA NA NA NA NA NA NA NA NA
#> LT-HSC_088 HSPC_298 HSPC_305 HSPC_311 HSPC_317 HSPC_323 HSPC_329 HSPC_335 LT-HSC_089
#> NA NA NA NA NA NA NA NA NA
#> HSPC_299 HSPC_306 HSPC_312 HSPC_318 HSPC_324 HSPC_330 HSPC_336 LT-HSC_090 HSPC_300
#> NA NA NA NA NA NA NA NA NA
#> Prog_301 Prog_307 Prog_313 Prog_319 Prog_325 Prog_331 LT-HSC_091 Prog_295 Prog_302
#> NA NA NA NA NA NA NA NA NA
#> Prog_308 Prog_314 Prog_320 Prog_326 Prog_332 LT-HSC_092 Prog_296 Prog_303 Prog_309
#> NA NA NA NA NA NA NA NA NA
#> Prog_315 Prog_321 Prog_327 Prog_333 LT-HSC_093 Prog_297 Prog_304 Prog_310 Prog_316
#> NA NA NA NA NA NA NA NA NA
#> Prog_322 Prog_328 Prog_334 LT-HSC_094 Prog_298 Prog_305 Prog_311 Prog_317 Prog_323
#> NA NA NA NA NA NA NA NA NA
#> Prog_329 Prog_335 LT-HSC_095 Prog_299 Prog_306 Prog_312 Prog_318 Prog_324 Prog_330
#> NA NA NA NA NA NA NA NA NA
#> Prog_336 LT-HSC_096 Prog_300 HSPC_343 HSPC_349 HSPC_355 HSPC_361 HSPC_367 HSPC_373
#> NA NA NA NA NA NA NA NA NA
#> LT-HSC_097 HSPC_337 HSPC_344 HSPC_350 HSPC_356 HSPC_362 HSPC_368 HSPC_374 LT-HSC_098
#> NA NA NA NA NA NA NA NA NA
#> HSPC_338 HSPC_345 HSPC_351 HSPC_357 HSPC_363 HSPC_369 HSPC_375 LT-HSC_099 HSPC_339
#> NA NA NA NA NA NA NA NA NA
#> HSPC_346 HSPC_352 HSPC_358 HSPC_364 HSPC_370 HSPC_376 LT-HSC_100 HSPC_340 HSPC_347
#> NA NA NA NA NA NA NA NA NA
#> HSPC_353 HSPC_359 HSPC_365 HSPC_371 HSPC_377 LT-HSC_101 HSPC_341 HSPC_348 HSPC_354
#> NA NA NA NA NA NA NA NA NA
#> HSPC_360 HSPC_366 HSPC_372 HSPC_378 LT-HSC_102 HSPC_342 Prog_343 Prog_349 Prog_355
#> NA NA NA NA NA NA NA NA NA
#> Prog_361 Prog_367 Prog_373 LT-HSC_103 Prog_337 Prog_344 Prog_350 Prog_356 Prog_362
#> NA NA NA NA NA NA NA NA NA
#> Prog_368 Prog_374 LT-HSC_104 Prog_338 Prog_345 Prog_351 Prog_357 Prog_363 Prog_369
#> NA NA NA NA NA NA NA NA NA
#> Prog_375 LT-HSC_105 Prog_339 Prog_346 Prog_352 Prog_358 Prog_364 Prog_370 Prog_376
#> NA NA NA NA NA NA NA NA NA
#> LT-HSC_106 Prog_340 Prog_347 Prog_353 Prog_359 Prog_365 Prog_371 Prog_377 LT-HSC_107
#> NA NA NA NA NA NA NA NA NA
#> Prog_341 Prog_348 Prog_354 Prog_360 Prog_366 Prog_372 Prog_378 LT-HSC_108 Prog_342
#> NA NA NA NA NA NA NA NA NA
#> HSPC_385 HSPC_391 HSPC_397 HSPC_403 HSPC_409 HSPC_415 HSPC_421 HSPC_379 HSPC_386
#> NA NA NA NA NA NA NA NA NA
#> HSPC_392 HSPC_398 HSPC_404 HSPC_410 HSPC_416 HSPC_422 HSPC_380 HSPC_387 HSPC_393
#> NA NA NA NA NA NA NA NA NA
#> HSPC_399 HSPC_405 HSPC_411 HSPC_417 HSPC_423 HSPC_381 HSPC_388 HSPC_394 HSPC_400
#> NA NA NA NA NA NA NA NA NA
#> HSPC_406 HSPC_412 HSPC_418 HSPC_424 HSPC_382 HSPC_389 HSPC_395 HSPC_401 HSPC_407
#> NA NA NA NA NA NA NA NA NA
#> HSPC_413 HSPC_419 HSPC_425 HSPC_383 HSPC_390 HSPC_396 HSPC_402 HSPC_408 HSPC_414
#> NA NA NA NA NA NA NA NA NA
#> HSPC_420 HSPC_426 HSPC_384 Prog_385 Prog_391 Prog_397 Prog_403 Prog_409 Prog_415
#> NA NA NA NA NA NA NA NA NA
#> Prog_421 Prog_379 Prog_386 Prog_392 Prog_398 Prog_404 Prog_410 Prog_416 Prog_422
#> NA NA NA NA NA NA NA NA NA
#> Prog_380 Prog_387 Prog_393 Prog_399 Prog_405 Prog_411 Prog_417 Prog_423 Prog_381
#> NA NA NA NA NA NA NA NA NA
#> Prog_388 Prog_394 Prog_400 Prog_406 Prog_412 Prog_418 Prog_424 Prog_382 Prog_389
#> NA NA NA NA NA NA NA NA NA
#> Prog_395 Prog_401 Prog_407 Prog_413 Prog_419 Prog_425 Prog_383 Prog_390 Prog_396
#> NA NA NA NA NA NA NA NA NA
#> Prog_402 Prog_408 Prog_414 Prog_420 Prog_426 Prog_384 HSPC_433 HSPC_439 HSPC_445
#> NA NA NA NA NA NA NA NA NA
#> HSPC_451 HSPC_457 HSPC_463 LT-HSC_109 HSPC_427 HSPC_434 HSPC_440 HSPC_446 HSPC_452
#> NA NA NA NA NA NA NA NA NA
#> HSPC_458 HSPC_464 LT-HSC_110 HSPC_428 HSPC_435 HSPC_441 HSPC_447 HSPC_453 HSPC_459
#> NA NA NA NA NA NA NA NA NA
#> HSPC_465 LT-HSC_111 HSPC_429 HSPC_436 HSPC_442 HSPC_448 HSPC_454 HSPC_460 HSPC_466
#> NA NA NA NA NA NA NA NA NA
#> LT-HSC_112 HSPC_430 HSPC_437 HSPC_443 HSPC_449 HSPC_455 HSPC_461 HSPC_467 LT-HSC_113
#> NA NA NA NA NA NA NA NA NA
#> HSPC_431 HSPC_438 HSPC_444 HSPC_450 HSPC_456 HSPC_462 HSPC_468 LT-HSC_114 HSPC_432
#> NA NA NA NA NA NA NA NA NA
#> Prog_433 Prog_439 Prog_445 Prog_451 Prog_457 Prog_463 LT-HSC_115 Prog_427 Prog_434
#> NA NA NA NA NA NA NA NA NA
#> Prog_440 Prog_446 Prog_452 Prog_458 Prog_464 LT-HSC_116 Prog_428 Prog_435 Prog_441
#> NA NA NA NA NA NA NA NA NA
#> Prog_447 Prog_453 Prog_459 Prog_465 LT-HSC_117 Prog_429 Prog_436 Prog_442 Prog_448
#> NA NA NA NA NA NA NA NA NA
#> Prog_454 Prog_460 Prog_466 LT-HSC_118 Prog_430 Prog_437 Prog_443 Prog_449 Prog_455
#> NA NA NA NA NA NA NA NA NA
#> Prog_461 Prog_467 LT-HSC_119 Prog_431 Prog_438 Prog_444 Prog_450 Prog_456 Prog_462
#> NA NA NA NA NA NA NA NA NA
#> Prog_468 LT-HSC_120 Prog_432 HSPC_475 HSPC_481 HSPC_487 HSPC_493 HSPC_499 HSPC_505
#> NA NA NA NA NA NA NA NA NA
#> LT-HSC_121 HSPC_469 HSPC_476 HSPC_482 HSPC_488 HSPC_494 HSPC_500 HSPC_506 LT-HSC_122
#> NA NA NA NA NA NA NA NA NA
#> HSPC_470 HSPC_477 HSPC_483 HSPC_489 HSPC_495 HSPC_501 HSPC_507 LT-HSC_123 HSPC_471
#> NA NA NA NA NA NA NA NA NA
#> HSPC_478 HSPC_484 HSPC_490 HSPC_496 HSPC_502 HSPC_508 LT-HSC_124 HSPC_472 HSPC_479
#> NA NA NA NA NA NA NA NA NA
#> HSPC_485 HSPC_491 HSPC_497 HSPC_503 HSPC_509 LT-HSC_125 HSPC_473 HSPC_480 HSPC_486
#> NA NA NA NA NA NA NA NA NA
#> HSPC_492 HSPC_498 HSPC_504 HSPC_510 LT-HSC_126 HSPC_474 Prog_475 Prog_481 Prog_487
#> NA NA NA NA NA NA NA NA NA
#> Prog_493 Prog_499 Prog_505 LT-HSC_127 Prog_469 Prog_476 Prog_482 Prog_488 Prog_494
#> NA NA NA NA NA NA NA NA NA
#> Prog_500 Prog_506 LT-HSC_128 Prog_470 Prog_477 Prog_483 Prog_489 Prog_495 Prog_501
#> NA NA NA NA NA NA NA NA NA
#> Prog_507 LT-HSC_129 Prog_471 Prog_478 Prog_484 Prog_490 Prog_496 Prog_502 Prog_508
#> NA NA NA NA NA NA NA NA NA
#> LT-HSC_130 Prog_472 Prog_479 Prog_485 Prog_491 Prog_497 Prog_503 Prog_509 LT-HSC_131
#> NA NA NA NA NA NA NA NA NA
#> Prog_473 Prog_480 Prog_486 Prog_492 Prog_498 Prog_504 Prog_510 LT-HSC_132 Prog_474
#> NA NA NA NA NA NA NA NA NA
#> HSPC_517 HSPC_523 HSPC_529 HSPC_535 HSPC_541 HSPC_547 LT-HSC_133 HSPC_511 HSPC_518
#> NA NA NA NA NA NA NA NA NA
#> HSPC_524 HSPC_530 HSPC_536 HSPC_542 HSPC_548 LT-HSC_134 HSPC_512 HSPC_519 HSPC_525
#> NA NA NA NA NA NA NA NA NA
#> HSPC_531 HSPC_537 HSPC_543 HSPC_549 LT-HSC_135 HSPC_513 HSPC_520 HSPC_526 HSPC_532
#> NA NA NA NA NA NA NA NA NA
#> HSPC_538 HSPC_544 HSPC_550 LT-HSC_136 HSPC_514 HSPC_521 HSPC_527 HSPC_533 HSPC_539
#> NA NA NA NA NA NA NA NA NA
#> HSPC_545 HSPC_551 LT-HSC_137 HSPC_515 HSPC_522 HSPC_528 HSPC_534 HSPC_540 HSPC_546
#> NA NA NA NA NA NA NA NA NA
#> HSPC_552 LT-HSC_138 HSPC_516 Prog_517 Prog_523 Prog_529 Prog_535 Prog_541 Prog_547
#> NA NA NA NA NA NA NA NA NA
#> LT-HSC_139 Prog_511 Prog_518 Prog_524 Prog_530 Prog_536 Prog_542 Prog_548 LT-HSC_140
#> NA NA NA NA NA NA NA NA NA
#> Prog_512 Prog_519 Prog_525 Prog_531 Prog_537 Prog_543 Prog_549 LT-HSC_141 Prog_513
#> NA NA NA NA NA NA NA NA NA
#> Prog_520 Prog_526 Prog_532 Prog_538 Prog_544 Prog_550 LT-HSC_142 Prog_514 Prog_521
#> NA NA NA NA NA NA NA NA NA
#> Prog_527 Prog_533 Prog_539 Prog_545 Prog_551 LT-HSC_143 Prog_515 Prog_522 Prog_528
#> NA NA NA NA NA NA NA NA NA
#> Prog_534 Prog_540 Prog_546 Prog_552 LT-HSC_144 Prog_516 HSPC_559 HSPC_565 HSPC_571
#> NA NA NA NA NA NA NA NA NA
#> HSPC_577 HSPC_583 HSPC_589 LT-HSC_145 HSPC_553 HSPC_560 HSPC_566 HSPC_572 HSPC_578
#> NA NA NA NA NA NA NA NA NA
#> HSPC_584 HSPC_590 LT-HSC_146 HSPC_554 HSPC_561 HSPC_567 HSPC_573 HSPC_579 HSPC_585
#> NA NA NA NA NA NA NA NA NA
#> HSPC_591 LT-HSC_147 HSPC_555 HSPC_562 HSPC_568 HSPC_574 HSPC_580 HSPC_586 HSPC_592
#> NA NA NA NA NA NA NA NA NA
#> LT-HSC_148 HSPC_556 HSPC_563 HSPC_569 HSPC_575 HSPC_581 HSPC_587 HSPC_593 LT-HSC_149
#> NA NA NA NA NA NA NA NA NA
#> HSPC_557 HSPC_564 HSPC_570 HSPC_576 HSPC_582 HSPC_588 HSPC_594 LT-HSC_150 HSPC_558
#> NA NA NA NA NA NA NA NA NA
#> Prog_559 Prog_565 Prog_571 Prog_577 Prog_583 Prog_589 LT-HSC_151 Prog_553 Prog_560
#> NA NA NA NA NA NA NA NA NA
#> Prog_566 Prog_572 Prog_578 Prog_584 Prog_590 LT-HSC_152 Prog_554 Prog_561 Prog_567
#> NA NA NA NA NA NA NA NA NA
#> Prog_573 Prog_579 Prog_585 Prog_591 LT-HSC_153 Prog_555 Prog_562 Prog_568 Prog_574
#> NA NA NA NA NA NA NA NA NA
#> Prog_580 Prog_586 Prog_592 LT-HSC_154 Prog_556 Prog_563 Prog_569 Prog_575 Prog_581
#> NA NA NA NA NA NA NA NA NA
#> Prog_587 Prog_593 LT-HSC_155 Prog_557 Prog_564 Prog_570 Prog_576 Prog_582 Prog_588
#> NA NA NA NA NA NA NA NA NA
#> Prog_594 LT-HSC_156 Prog_558 HSPC_601 HSPC_607 HSPC_613 HSPC_619 HSPC_625 HSPC_631
#> NA NA NA NA NA NA NA NA NA
#> LT-HSC_157 HSPC_595 HSPC_602 HSPC_608 HSPC_614 HSPC_620 HSPC_626 HSPC_632 LT-HSC_158
#> NA NA NA NA NA NA NA NA NA
#> HSPC_596 HSPC_603 HSPC_609 HSPC_615 HSPC_621 HSPC_627 HSPC_633 LT-HSC_159 HSPC_597
#> NA NA NA NA NA NA NA NA NA
#> HSPC_604 HSPC_610 HSPC_616 HSPC_622 HSPC_628 HSPC_634 LT-HSC_160 HSPC_598 HSPC_605
#> NA NA NA NA NA NA NA NA NA
#> HSPC_611 HSPC_617 HSPC_623 HSPC_629 HSPC_635 LT-HSC_161 HSPC_599 HSPC_606 HSPC_612
#> NA NA NA NA NA NA NA NA NA
#> HSPC_618 HSPC_624 HSPC_630 HSPC_636 LT-HSC_162 HSPC_600 Prog_601 Prog_607 Prog_613
#> NA NA NA NA NA NA NA NA NA
#> Prog_619 Prog_625 Prog_631 LT-HSC_163 Prog_595 Prog_602 Prog_608 Prog_614 Prog_620
#> NA NA NA NA NA NA NA NA NA
#> Prog_626 Prog_632 LT-HSC_164 Prog_596 Prog_603 Prog_609 Prog_615 Prog_621 Prog_627
#> NA NA NA NA NA NA NA NA NA
#> Prog_633 LT-HSC_165 Prog_597 Prog_604 Prog_610 Prog_616 Prog_622 Prog_628 Prog_634
#> NA NA NA NA NA NA NA NA NA
#> LT-HSC_166 Prog_598 Prog_605 Prog_611 Prog_617 Prog_623 Prog_629 Prog_635 LT-HSC_167
#> NA NA NA NA NA NA NA NA NA
#> Prog_599 Prog_606 Prog_612 Prog_618 Prog_624 Prog_630 Prog_636 LT-HSC_168 Prog_600
#> NA NA NA NA NA NA NA NA NA
#> HSPC_643 HSPC_649 HSPC_655 HSPC_661 HSPC_667 HSPC_673 LT-HSC_169 HSPC_637 HSPC_644
#> NA NA NA NA NA NA NA NA NA
#> HSPC_650 HSPC_656 HSPC_662 HSPC_668 HSPC_674 LT-HSC_170 HSPC_638 HSPC_645 HSPC_651
#> NA NA NA NA NA NA NA NA NA
#> HSPC_657 HSPC_663 HSPC_669 HSPC_675 LT-HSC_171 HSPC_639 HSPC_646 HSPC_652 HSPC_658
#> NA NA NA NA NA NA NA NA NA
#> HSPC_664 HSPC_670 HSPC_676 LT-HSC_172 HSPC_640 HSPC_647 HSPC_653 HSPC_659 HSPC_665
#> NA NA NA NA NA NA NA NA NA
#> HSPC_671 HSPC_677 LT-HSC_173 HSPC_641 HSPC_648 HSPC_654 HSPC_660 HSPC_666 HSPC_672
#> NA NA NA NA NA NA NA NA NA
#> HSPC_678 LT-HSC_174 HSPC_642 Prog_643 Prog_649 Prog_655 Prog_661 Prog_667 Prog_673
#> NA NA NA NA NA NA NA NA NA
#> LT-HSC_175 Prog_637 Prog_644 Prog_650 Prog_656 Prog_662 Prog_668 Prog_674 LT-HSC_176
#> NA NA NA NA NA NA NA NA NA
#> Prog_638 Prog_645 Prog_651 Prog_657 Prog_663 Prog_669 Prog_675 LT-HSC_177 Prog_639
#> NA NA NA NA NA NA NA NA NA
#> Prog_646 Prog_652 Prog_658 Prog_664 Prog_670 Prog_676 LT-HSC_178 Prog_640 Prog_647
#> NA NA NA NA NA NA NA NA NA
#> Prog_653 Prog_659 Prog_665 Prog_671 Prog_677 LT-HSC_179 Prog_641 Prog_648 Prog_654
#> NA NA NA NA NA NA NA NA NA
#> Prog_660 Prog_666 Prog_672 Prog_678 LT-HSC_180 Prog_642 HSPC_685 HSPC_691 HSPC_697
#> NA NA NA NA NA NA NA NA NA
#> HSPC_703 HSPC_709 HSPC_715 LT-HSC_181 HSPC_679 HSPC_686 HSPC_692 HSPC_698 HSPC_704
#> NA NA NA NA NA NA NA NA NA
#> HSPC_710 HSPC_716 LT-HSC_182 HSPC_680 HSPC_687 HSPC_693 HSPC_699 HSPC_705 HSPC_711
#> NA NA NA NA NA NA NA NA NA
#> HSPC_717 LT-HSC_183 HSPC_681 HSPC_688 HSPC_694 HSPC_700 HSPC_706 HSPC_712 HSPC_718
#> NA NA NA NA NA NA NA NA NA
#> LT-HSC_184 HSPC_682 HSPC_689 HSPC_695 HSPC_701 HSPC_707 HSPC_713 HSPC_719 LT-HSC_185
#> NA NA NA NA NA NA NA NA NA
#> HSPC_683 HSPC_690 HSPC_696 HSPC_702 HSPC_708 HSPC_714 HSPC_720 LT-HSC_186 HSPC_684
#> NA NA NA NA NA NA NA NA NA
#> Prog_685 Prog_691 Prog_697 Prog_703 Prog_709 Prog_715 LT-HSC_187 Prog_679 Prog_686
#> NA NA NA NA NA NA NA NA NA
#> Prog_692 Prog_698 Prog_704 Prog_710 Prog_716 LT-HSC_188 Prog_680 Prog_687 Prog_693
#> NA NA NA NA NA NA NA NA NA
#> Prog_699 Prog_705 Prog_711 Prog_717 LT-HSC_189 Prog_681 Prog_688 Prog_694 Prog_700
#> NA NA NA NA NA NA NA NA NA
#> Prog_706 Prog_712 Prog_718 LT-HSC_190 Prog_682 Prog_689 Prog_695 Prog_701 Prog_707
#> NA NA NA NA NA NA NA NA NA
#> Prog_713 Prog_719 LT-HSC_191 Prog_683 Prog_690 Prog_696 Prog_702 Prog_708 Prog_714
#> NA NA NA NA NA NA NA NA NA
#> Prog_720 LT-HSC_192 Prog_684 HSPC_727 HSPC_733 HSPC_739 HSPC_745 HSPC_751 HSPC_757
#> NA NA NA NA NA NA NA NA NA
#> LT-HSC_193 HSPC_721 HSPC_728 HSPC_734 HSPC_740 HSPC_746 HSPC_752 HSPC_758 LT-HSC_194
#> NA NA NA NA NA NA NA NA NA
#> HSPC_722 HSPC_729 HSPC_735 HSPC_741 HSPC_747 HSPC_753 HSPC_759 LT-HSC_195 HSPC_723
#> NA NA NA NA NA NA NA NA NA
#> HSPC_730 HSPC_736 HSPC_742 HSPC_748 HSPC_754 HSPC_760 LT-HSC_196 HSPC_724 HSPC_731
#> NA NA NA NA NA NA NA NA NA
#> HSPC_737 HSPC_743 HSPC_749 HSPC_755 HSPC_761 LT-HSC_197 HSPC_725 HSPC_732 HSPC_738
#> NA NA NA NA NA NA NA NA NA
#> HSPC_744 HSPC_750 HSPC_756 HSPC_762 LT-HSC_198 HSPC_726 Prog_727 Prog_733 Prog_739
#> NA NA NA NA NA NA NA NA NA
#> Prog_745 Prog_751 Prog_757 LT-HSC_199 Prog_721 Prog_728 Prog_734 Prog_740 Prog_746
#> NA NA NA NA NA NA NA NA NA
#> Prog_752 Prog_758 LT-HSC_200 Prog_722 Prog_729 Prog_735 Prog_741 Prog_747 Prog_753
#> NA NA NA NA NA NA NA NA NA
#> Prog_759 LT-HSC_201 Prog_723 Prog_730 Prog_736 Prog_742 Prog_748 Prog_754 Prog_760
#> NA NA NA NA NA NA NA NA NA
#> LT-HSC_202 Prog_724 Prog_731 Prog_737 Prog_743 Prog_749 Prog_755 Prog_761 LT-HSC_203
#> NA NA NA NA NA NA NA NA NA
#> Prog_725 Prog_732 Prog_738 Prog_744 Prog_750 Prog_756 Prog_762 LT-HSC_204 Prog_726
#> NA NA NA NA NA NA NA NA NA
#> HSPC_769 HSPC_775 HSPC_781 HSPC_787 HSPC_793 HSPC_799 LT-HSC_205 HSPC_763 HSPC_770
#> NA NA NA NA NA NA NA NA NA
#> HSPC_776 HSPC_782 HSPC_788 HSPC_794 HSPC_800 LT-HSC_206 HSPC_764 HSPC_771 HSPC_777
#> NA NA NA NA NA NA NA NA NA
#> HSPC_783 HSPC_789 HSPC_795 HSPC_801 LT-HSC_207 HSPC_765 HSPC_772 HSPC_778 HSPC_784
#> NA NA NA NA NA NA NA NA NA
#> HSPC_790 HSPC_796 HSPC_802 LT-HSC_208 HSPC_766 HSPC_773 HSPC_779 HSPC_785 HSPC_791
#> NA NA NA NA NA NA NA NA NA
#> HSPC_797 HSPC_803 LT-HSC_209 HSPC_767 HSPC_774 HSPC_780 HSPC_786 HSPC_792 HSPC_798
#> NA NA NA NA NA NA NA NA NA
#> HSPC_804 LT-HSC_210 HSPC_768 Prog_769 Prog_775 Prog_781 Prog_787 Prog_793 Prog_799
#> NA NA NA NA NA NA NA NA NA
#> LT-HSC_211 Prog_763 Prog_770 Prog_776 Prog_782 Prog_788 Prog_794 Prog_800 LT-HSC_212
#> NA NA NA NA NA NA NA NA NA
#> Prog_764 Prog_771 Prog_777 Prog_783 Prog_789 Prog_795 Prog_801 LT-HSC_213 Prog_765
#> NA NA NA NA NA NA NA NA NA
#> Prog_772 Prog_778 Prog_784 Prog_790 Prog_796 Prog_802 LT-HSC_214 Prog_766 Prog_773
#> NA NA NA NA NA NA NA NA NA
#> Prog_779 Prog_785 Prog_791 Prog_797 Prog_803 LT-HSC_215 Prog_767 Prog_774 Prog_780
#> NA NA NA NA NA NA NA NA NA
#> Prog_786 Prog_792 Prog_798 Prog_804 LT-HSC_216 Prog_768 HSPC_811 HSPC_817 HSPC_823
#> NA NA NA NA NA NA NA NA NA
#> HSPC_829 HSPC_835 HSPC_841 HSPC_847 HSPC_805 HSPC_812 HSPC_818 HSPC_824 HSPC_830
#> NA NA NA NA NA NA NA NA NA
#> HSPC_836 HSPC_842 HSPC_848 HSPC_806 HSPC_813 HSPC_819 HSPC_825 HSPC_831 HSPC_837
#> NA NA NA NA NA NA NA NA NA
#> HSPC_843 HSPC_849 HSPC_807 HSPC_814 HSPC_820 HSPC_826 HSPC_832 HSPC_838 HSPC_844
#> NA NA NA NA NA NA NA NA NA
#> HSPC_850 HSPC_808 HSPC_815 HSPC_821 HSPC_827 HSPC_833 HSPC_839 HSPC_845 HSPC_851
#> NA NA NA NA NA NA NA NA NA
#> HSPC_809 HSPC_816 HSPC_822 HSPC_828 HSPC_834 HSPC_840 HSPC_846 HSPC_852 HSPC_810
#> NA NA NA NA NA NA NA NA NA
#> Prog_811 Prog_817 Prog_823 Prog_829 Prog_835 Prog_841 Prog_847 Prog_805 Prog_812
#> NA NA NA NA NA NA NA NA NA
#> Prog_818 Prog_824 Prog_830 Prog_836 Prog_842 Prog_848 Prog_806 Prog_813 Prog_819
#> NA NA NA NA NA NA NA NA NA
#> Prog_825 Prog_831 Prog_837 Prog_843 Prog_849 Prog_807 Prog_814 Prog_820 Prog_826
#> NA NA NA NA NA NA NA NA NA
#> Prog_832 Prog_838 Prog_844 Prog_850 Prog_808 Prog_815 Prog_821 Prog_827 Prog_833
#> NA NA NA NA NA NA NA NA NA
#> Prog_839 Prog_845 Prog_851 Prog_809 Prog_816 Prog_822 Prog_828 Prog_834 Prog_840
#> NA NA NA NA NA NA NA NA NA
#> Prog_846 Prog_852 Prog_810
#> NA NA NA
Heatmaps of the top rows:
top_rows_heatmap(res_rh)
#> Error in h(simpleError(msg, call)) :
#> error in evaluating the argument 'object' in selecting a method for function 'draw': no applicable method for 'height' applied to an object of class "list"
Top rows on each node:
top_rows_overlap(res_rh, method = "upset")
UMAP plot which shows how samples are separated.
par(mfrow = c(1, 2))
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 630),
method = "UMAP", top_value_method = "SD", top_n = 2500, scale_rows = FALSE)
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 630),
method = "UMAP", top_value_method = "ATC", top_n = 2500, scale_rows = TRUE)
par(mfrow = c(1, 2))
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 710),
method = "UMAP", top_value_method = "SD", top_n = 2500, scale_rows = FALSE)
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 710),
method = "UMAP", top_value_method = "ATC", top_n = 2500, scale_rows = TRUE)
par(mfrow = c(1, 2))
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 741),
method = "UMAP", top_value_method = "SD", top_n = 2500, scale_rows = FALSE)
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 741),
method = "UMAP", top_value_method = "ATC", top_n = 2500, scale_rows = TRUE)
par(mfrow = c(1, 2))
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 767),
method = "UMAP", top_value_method = "SD", top_n = 2500, scale_rows = FALSE)
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 767),
method = "UMAP", top_value_method = "ATC", top_n = 2500, scale_rows = TRUE)
par(mfrow = c(1, 2))
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 848),
method = "UMAP", top_value_method = "SD", top_n = 2500, scale_rows = FALSE)
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 848),
method = "UMAP", top_value_method = "ATC", top_n = 2500, scale_rows = TRUE)
par(mfrow = c(1, 2))
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 871),
method = "UMAP", top_value_method = "SD", top_n = 2500, scale_rows = FALSE)
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 871),
method = "UMAP", top_value_method = "ATC", top_n = 2500, scale_rows = TRUE)
par(mfrow = c(1, 2))
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 904),
method = "UMAP", top_value_method = "SD", top_n = 2500, scale_rows = FALSE)
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 904),
method = "UMAP", top_value_method = "ATC", top_n = 2500, scale_rows = TRUE)
par(mfrow = c(1, 2))
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 999),
method = "UMAP", top_value_method = "SD", top_n = 2500, scale_rows = FALSE)
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 999),
method = "UMAP", top_value_method = "ATC", top_n = 2500, scale_rows = TRUE)
par(mfrow = c(1, 2))
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 1199),
method = "UMAP", top_value_method = "SD", top_n = 2500, scale_rows = FALSE)
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 1199),
method = "UMAP", top_value_method = "ATC", top_n = 2500, scale_rows = TRUE)
par(mfrow = c(1, 2))
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 1314),
method = "UMAP", top_value_method = "SD", top_n = 2500, scale_rows = FALSE)
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 1314),
method = "UMAP", top_value_method = "ATC", top_n = 2500, scale_rows = TRUE)
par(mfrow = c(1, 2))
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 1324),
method = "UMAP", top_value_method = "SD", top_n = 2500, scale_rows = FALSE)
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 1324),
method = "UMAP", top_value_method = "ATC", top_n = 2500, scale_rows = TRUE)
par(mfrow = c(1, 2))
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 1413),
method = "UMAP", top_value_method = "SD", top_n = 2500, scale_rows = FALSE)
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 1413),
method = "UMAP", top_value_method = "ATC", top_n = 2500, scale_rows = TRUE)
par(mfrow = c(1, 2))
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 1497),
method = "UMAP", top_value_method = "SD", top_n = 2500, scale_rows = FALSE)
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 1497),
method = "UMAP", top_value_method = "ATC", top_n = 2500, scale_rows = TRUE)
par(mfrow = c(1, 2))
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 1938),
method = "UMAP", top_value_method = "SD", top_n = 2500, scale_rows = FALSE)
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 1938),
method = "UMAP", top_value_method = "ATC", top_n = 2500, scale_rows = TRUE)
par(mfrow = c(1, 2))
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 2046),
method = "UMAP", top_value_method = "SD", top_n = 2500, scale_rows = FALSE)
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 2046),
method = "UMAP", top_value_method = "ATC", top_n = 2500, scale_rows = TRUE)
par(mfrow = c(1, 2))
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 2134),
method = "UMAP", top_value_method = "SD", top_n = 2500, scale_rows = FALSE)
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 2134),
method = "UMAP", top_value_method = "ATC", top_n = 2500, scale_rows = TRUE)
par(mfrow = c(1, 2))
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 2897),
method = "UMAP", top_value_method = "SD", top_n = 2500, scale_rows = FALSE)
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 2897),
method = "UMAP", top_value_method = "ATC", top_n = 2500, scale_rows = TRUE)
par(mfrow = c(1, 2))
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 3285),
method = "UMAP", top_value_method = "SD", top_n = 2500, scale_rows = FALSE)
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 3285),
method = "UMAP", top_value_method = "ATC", top_n = 2500, scale_rows = TRUE)
par(mfrow = c(1, 2))
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 3418),
method = "UMAP", top_value_method = "SD", top_n = 2500, scale_rows = FALSE)
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 3418),
method = "UMAP", top_value_method = "ATC", top_n = 2500, scale_rows = TRUE)
par(mfrow = c(1, 2))
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 5481),
method = "UMAP", top_value_method = "SD", top_n = 2500, scale_rows = FALSE)
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 5481),
method = "UMAP", top_value_method = "ATC", top_n = 2500, scale_rows = TRUE)
par(mfrow = c(1, 2))
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 12492),
method = "UMAP", top_value_method = "SD", top_n = 2500, scale_rows = FALSE)
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 12492),
method = "UMAP", top_value_method = "ATC", top_n = 2500, scale_rows = TRUE)
par(mfrow = c(1, 2))
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 12685),
method = "UMAP", top_value_method = "SD", top_n = 2500, scale_rows = FALSE)
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 12685),
method = "UMAP", top_value_method = "ATC", top_n = 2500, scale_rows = TRUE)
Signatures on the heatmap are the union of all signatures found on every node on the hierarchy. The number of k-means on rows are automatically selected by the function.
get_signatures(res_rh, merge_node = merge_node_param(min_n_signatures = 630))
get_signatures(res_rh, merge_node = merge_node_param(min_n_signatures = 710))
get_signatures(res_rh, merge_node = merge_node_param(min_n_signatures = 741))
get_signatures(res_rh, merge_node = merge_node_param(min_n_signatures = 767))
get_signatures(res_rh, merge_node = merge_node_param(min_n_signatures = 848))
get_signatures(res_rh, merge_node = merge_node_param(min_n_signatures = 871))
get_signatures(res_rh, merge_node = merge_node_param(min_n_signatures = 904))
get_signatures(res_rh, merge_node = merge_node_param(min_n_signatures = 999))
get_signatures(res_rh, merge_node = merge_node_param(min_n_signatures = 1199))
get_signatures(res_rh, merge_node = merge_node_param(min_n_signatures = 1314))
get_signatures(res_rh, merge_node = merge_node_param(min_n_signatures = 1324))
get_signatures(res_rh, merge_node = merge_node_param(min_n_signatures = 1413))
get_signatures(res_rh, merge_node = merge_node_param(min_n_signatures = 1497))
get_signatures(res_rh, merge_node = merge_node_param(min_n_signatures = 1938))
get_signatures(res_rh, merge_node = merge_node_param(min_n_signatures = 2046))
get_signatures(res_rh, merge_node = merge_node_param(min_n_signatures = 2134))
get_signatures(res_rh, merge_node = merge_node_param(min_n_signatures = 2897))
get_signatures(res_rh, merge_node = merge_node_param(min_n_signatures = 3285))
get_signatures(res_rh, merge_node = merge_node_param(min_n_signatures = 3418))
get_signatures(res_rh, merge_node = merge_node_param(min_n_signatures = 5481))
get_signatures(res_rh, merge_node = merge_node_param(min_n_signatures = 12492))
get_signatures(res_rh, merge_node = merge_node_param(min_n_signatures = 12685))
#> Error in names(x) <- value: 'names' attribute [1] must be the same length as the vector [0]
Compare signatures from different nodes:
compare_signatures(res_rh, verbose = FALSE)
If there are too many signatures, top_signatures = ... can be set to only show the
signatures with the highest FDRs. Note it only works on every node and the final signatures
are the union of all signatures of all nodes.
# code only for demonstration
# e.g. to show the top 500 most significant rows on each node.
tb = get_signature(res_rh, top_signatures = 500)
Child nodes: Node01 , Node02 , Node03 , Node04 .
The object with results only for a single top-value method and a single partitioning method can be extracted as:
res = res_rh["0"]
A summary of res and all the functions that can be applied to it:
res
#> A 'DownSamplingConsensusPartition' object with k = 2, 3, 4.
#> On a matrix with 22269 rows and 500 columns, randomly sampled from 1920 columns.
#> Top rows (2037) are extracted by 'ATC' method.
#> Subgroups are detected by 'skmeans' method.
#> Performed in total 150 partitions by row resampling.
#> Best k for subgroups seems to be 4.
#>
#> Following methods can be applied to this 'DownSamplingConsensusPartition' object:
#> [1] "cola_report" "collect_classes" "collect_plots"
#> [4] "collect_stats" "colnames" "compare_partitions"
#> [7] "compare_signatures" "consensus_heatmap" "dimension_reduction"
#> [10] "functional_enrichment" "get_anno_col" "get_anno"
#> [13] "get_classes" "get_consensus" "get_matrix"
#> [16] "get_membership" "get_param" "get_signatures"
#> [19] "get_stats" "is_best_k" "is_stable_k"
#> [22] "membership_heatmap" "ncol" "nrow"
#> [25] "plot_ecdf" "predict_classes" "rownames"
#> [28] "select_partition_number" "show" "suggest_best_k"
#> [31] "test_to_known_factors" "top_rows_heatmap"
collect_plots() function collects all the plots made from res for all k (number of subgroups)
into one single page to provide an easy and fast comparison between different k.
collect_plots(res)
The plots are:
k and the heatmap of
predicted classes for each k.k.k.k.All the plots in panels can be made by individual functions and they are plotted later in this section.
select_partition_number() produces several plots showing different
statistics for choosing “optimized” k. There are following statistics:
k;k, the area increased is defined as \(A_k - A_{k-1}\).The detailed explanations of these statistics can be found in the cola vignette.
Generally speaking, higher 1-PAC score, higher mean silhouette score or higher
concordance corresponds to better partition. Rand index and Jaccard index
measure how similar the current partition is compared to partition with k-1.
If they are too similar, we won't accept k is better than k-1.
select_partition_number(res)
The numeric values for all these statistics can be obtained by get_stats().
get_stats(res)
#> k 1-PAC mean_silhouette concordance area_increased Rand Jaccard
#> 2 2 1.000 0.990 0.996 0.5013 0.499 0.499
#> 3 3 1.000 0.982 0.993 0.2099 0.878 0.760
#> 4 4 0.997 0.955 0.979 0.0647 0.955 0.886
suggest_best_k() suggests the best \(k\) based on these statistics. The rules are as follows:
suggest_best_k(res)
#> [1] 4
#> attr(,"optional")
#> [1] 2 3
There is also optional best \(k\) = 2 3 that is worth to check.
Following is the table of the partitions (You need to click the show/hide
code output link to see it). The membership matrix (columns with name p*)
is inferred by
clue::cl_consensus()
function with the SE method. Basically the value in the membership matrix
represents the probability to belong to a certain group. The finall subgroup
label for an item is determined with the group with highest probability it
belongs to.
In get_classes() function, the entropy is calculated from the membership
matrix and the silhouette score is calculated from the consensus matrix.
get_classes(res, k = 2)
#> class p
#> HSPC_007 2 0.000
#> HSPC_013 2 1.000
#> HSPC_019 2 0.000
#> HSPC_025 2 1.000
#> HSPC_031 1 1.000
#> HSPC_037 2 0.000
#> LT-HSC_001 2 0.000
#> HSPC_001 1 0.747
#> HSPC_008 2 0.249
#> HSPC_014 2 0.249
#> HSPC_020 2 0.000
#> HSPC_026 1 0.000
#> HSPC_032 2 0.000
#> HSPC_038 2 1.000
#> LT-HSC_002 2 0.751
#> HSPC_002 2 0.000
#> HSPC_009 2 1.000
#> HSPC_015 2 0.000
#> HSPC_021 2 1.000
#> HSPC_027 1 0.000
#> HSPC_033 2 0.751
#> HSPC_039 2 0.000
#> LT-HSC_003 2 0.502
#> HSPC_003 1 0.498
#> HSPC_010 2 0.000
#> HSPC_016 1 0.000
#> HSPC_022 1 0.000
#> HSPC_028 1 1.000
#> HSPC_034 1 0.000
#> HSPC_040 1 0.502
#> LT-HSC_004 2 0.000
#> HSPC_004 1 1.000
#> HSPC_011 2 0.502
#> HSPC_017 2 0.000
#> HSPC_023 2 0.249
#> HSPC_029 2 0.000
#> HSPC_035 2 0.253
#> HSPC_041 2 0.000
#> LT-HSC_005 2 0.000
#> HSPC_005 2 0.000
#> HSPC_012 2 1.000
#> HSPC_018 2 0.253
#> HSPC_024 2 0.000
#> HSPC_030 1 0.498
#> HSPC_036 1 0.000
#> HSPC_042 1 1.000
#> LT-HSC_006 2 0.249
#> HSPC_006 1 0.000
#> Prog_007 1 0.502
#> Prog_013 1 0.747
#> Prog_019 1 0.000
#> Prog_025 1 0.000
#> Prog_031 1 1.000
#> Prog_037 1 0.000
#> LT-HSC_007 2 0.249
#> Prog_001 1 0.751
#> Prog_008 1 0.000
#> Prog_014 1 0.000
#> Prog_020 1 0.000
#> Prog_026 1 1.000
#> Prog_032 1 0.000
#> Prog_038 1 0.000
#> LT-HSC_008 2 0.498
#> Prog_002 1 0.000
#> Prog_009 1 0.000
#> Prog_015 1 0.000
#> Prog_021 1 0.000
#> Prog_027 1 0.000
#> Prog_033 1 0.000
#> Prog_039 1 0.000
#> LT-HSC_009 2 0.253
#> Prog_003 1 0.000
#> Prog_010 2 0.000
#> Prog_016 1 0.000
#> Prog_022 1 0.000
#> Prog_028 1 0.000
#> Prog_034 2 0.000
#> Prog_040 1 0.000
#> LT-HSC_010 1 0.000
#> Prog_004 1 0.249
#> Prog_011 1 0.000
#> Prog_017 1 0.000
#> Prog_023 1 0.000
#> Prog_029 1 0.000
#> Prog_035 1 0.000
#> Prog_041 2 0.747
#> LT-HSC_011 2 1.000
#> Prog_005 2 0.502
#> Prog_012 2 0.000
#> Prog_018 2 0.751
#> Prog_024 1 0.000
#> Prog_030 1 0.000
#> Prog_036 1 0.000
#> Prog_042 1 0.000
#> LT-HSC_012 1 0.000
#> Prog_006 1 0.000
#> HSPC_049 1 1.000
#> HSPC_055 2 0.751
#> HSPC_061 2 0.253
#> HSPC_067 2 0.502
#> HSPC_073 2 0.000
#> HSPC_079 1 0.000
#> LT-HSC_013 2 0.000
#> HSPC_043 2 0.751
#> HSPC_050 2 1.000
#> HSPC_056 2 0.498
#> HSPC_062 1 0.000
#> HSPC_068 2 0.249
#> HSPC_074 2 0.498
#> HSPC_080 1 0.751
#> LT-HSC_014 2 0.000
#> HSPC_044 2 1.000
#> HSPC_051 1 1.000
#> HSPC_057 2 0.502
#> HSPC_063 1 0.000
#> HSPC_069 1 1.000
#> HSPC_075 2 0.751
#> HSPC_081 1 0.249
#> LT-HSC_015 2 0.000
#> HSPC_045 1 0.751
#> HSPC_052 2 1.000
#> HSPC_058 2 0.000
#> HSPC_064 1 0.000
#> HSPC_070 1 1.000
#> HSPC_076 1 0.249
#> HSPC_082 2 0.000
#> LT-HSC_016 2 0.000
#> HSPC_046 1 0.751
#> HSPC_053 1 0.751
#> HSPC_059 2 0.000
#> HSPC_065 1 0.000
#> HSPC_071 1 0.000
#> HSPC_077 1 0.000
#> HSPC_083 2 0.000
#> LT-HSC_017 2 0.000
#> HSPC_047 2 0.249
#> HSPC_054 2 0.000
#> HSPC_060 1 1.000
#> HSPC_066 1 1.000
#> HSPC_072 1 0.000
#> HSPC_078 2 1.000
#> HSPC_084 2 0.751
#> LT-HSC_018 2 0.000
#> HSPC_048 1 1.000
#> Prog_049 1 0.000
#> Prog_055 1 0.000
#> Prog_061 1 0.000
#> Prog_067 1 0.000
#> Prog_073 1 1.000
#> Prog_079 1 0.000
#> LT-HSC_019 2 0.000
#> Prog_043 1 0.000
#> Prog_050 1 0.000
#> Prog_056 1 0.000
#> Prog_062 2 1.000
#> Prog_068 1 0.747
#> Prog_074 1 0.000
#> Prog_080 2 0.249
#> LT-HSC_020 1 1.000
#> Prog_044 1 0.751
#> Prog_051 1 0.000
#> Prog_057 1 0.000
#> Prog_063 2 0.000
#> Prog_069 1 0.000
#> Prog_075 1 0.000
#> Prog_081 1 0.000
#> LT-HSC_021 1 0.253
#> Prog_045 1 0.000
#> Prog_052 2 0.751
#> Prog_058 1 0.000
#> Prog_064 1 0.000
#> Prog_070 1 0.249
#> Prog_076 1 0.000
#> Prog_082 1 0.000
#> LT-HSC_022 2 0.000
#> Prog_046 1 0.000
#> Prog_053 1 0.000
#> Prog_059 1 0.000
#> Prog_065 1 0.000
#> Prog_071 1 0.000
#> Prog_077 1 0.751
#> Prog_083 1 0.000
#> LT-HSC_023 2 0.000
#> Prog_047 1 0.000
#> Prog_054 1 0.000
#> Prog_060 2 0.000
#> Prog_066 1 0.751
#> Prog_072 1 0.502
#> Prog_078 1 0.000
#> Prog_084 1 0.000
#> LT-HSC_024 1 0.253
#> Prog_048 1 0.253
#> HSPC_091 2 1.000
#> HSPC_097 2 1.000
#> HSPC_103 2 0.253
#> HSPC_109 2 1.000
#> HSPC_115 2 0.249
#> HSPC_121 2 0.000
#> LT-HSC_025 2 0.498
#> HSPC_085 2 0.249
#> HSPC_092 2 0.000
#> HSPC_098 2 0.751
#> HSPC_104 2 0.000
#> HSPC_110 2 1.000
#> HSPC_116 2 0.000
#> HSPC_122 2 0.000
#> LT-HSC_026 2 0.751
#> HSPC_086 2 0.000
#> HSPC_093 2 0.249
#> HSPC_099 2 0.249
#> HSPC_105 2 0.000
#> HSPC_111 2 0.000
#> HSPC_117 2 1.000
#> HSPC_123 2 0.249
#> LT-HSC_027 2 0.000
#> HSPC_087 2 0.000
#> HSPC_094 1 0.000
#> HSPC_100 1 1.000
#> HSPC_106 2 0.000
#> HSPC_112 2 0.000
#> HSPC_118 1 0.502
#> HSPC_124 2 0.000
#> LT-HSC_028 1 0.249
#> HSPC_088 1 0.751
#> HSPC_095 2 0.000
#> HSPC_101 1 0.000
#> HSPC_107 2 0.000
#> HSPC_113 2 1.000
#> HSPC_119 2 0.000
#> HSPC_125 1 0.498
#> LT-HSC_029 2 0.000
#> HSPC_089 1 0.249
#> HSPC_096 2 0.751
#> HSPC_102 1 0.000
#> HSPC_108 1 1.000
#> HSPC_114 1 1.000
#> HSPC_120 2 0.000
#> HSPC_126 1 1.000
#> LT-HSC_030 2 0.000
#> HSPC_090 1 0.747
#> Prog_091 1 0.000
#> Prog_097 1 0.000
#> Prog_103 1 0.751
#> Prog_109 1 0.000
#> Prog_115 1 0.000
#> Prog_121 2 0.000
#> LT-HSC_031 1 0.751
#> Prog_085 1 0.000
#> Prog_092 1 0.249
#> Prog_098 1 0.000
#> Prog_104 2 0.502
#> Prog_110 1 0.000
#> Prog_116 1 0.751
#> Prog_122 1 1.000
#> LT-HSC_032 1 0.000
#> Prog_086 2 0.498
#> Prog_093 1 0.000
#> Prog_099 1 0.498
#> Prog_105 1 0.000
#> Prog_111 1 0.000
#> Prog_117 1 0.253
#> Prog_123 1 0.000
#> LT-HSC_033 2 0.000
#> Prog_087 1 0.000
#> Prog_094 1 0.000
#> Prog_100 1 0.000
#> Prog_106 1 1.000
#> Prog_112 1 0.000
#> Prog_118 1 0.000
#> Prog_124 1 0.502
#> LT-HSC_034 2 0.502
#> Prog_088 2 1.000
#> Prog_095 1 0.000
#> Prog_101 1 0.000
#> Prog_107 1 0.000
#> Prog_113 1 0.000
#> Prog_119 1 0.000
#> Prog_125 1 0.000
#> LT-HSC_035 2 1.000
#> Prog_089 1 0.000
#> Prog_096 1 0.747
#> Prog_102 2 0.000
#> Prog_108 1 0.000
#> Prog_114 1 0.000
#> Prog_120 2 1.000
#> Prog_126 1 0.000
#> LT-HSC_036 1 0.751
#> Prog_090 1 0.000
#> HSPC_133 2 1.000
#> HSPC_139 2 0.000
#> HSPC_145 2 0.249
#> HSPC_151 2 1.000
#> HSPC_157 2 1.000
#> HSPC_163 2 0.000
#> LT-HSC_037 2 0.000
#> HSPC_127 1 0.000
#> HSPC_134 2 1.000
#> HSPC_140 2 0.498
#> HSPC_146 2 1.000
#> HSPC_152 2 0.249
#> HSPC_158 2 1.000
#> HSPC_164 2 0.249
#> LT-HSC_038 2 0.000
#> HSPC_128 2 0.000
#> HSPC_135 2 0.000
#> HSPC_141 2 0.751
#> HSPC_147 2 0.000
#> HSPC_153 2 0.751
#> HSPC_159 2 0.751
#> HSPC_165 2 0.751
#> LT-HSC_039 2 0.249
#> HSPC_129 2 0.000
#> HSPC_136 2 0.249
#> HSPC_142 1 0.747
#> HSPC_148 2 0.751
#> HSPC_154 2 1.000
#> HSPC_160 2 0.498
#> HSPC_166 2 1.000
#> LT-HSC_040 2 1.000
#> HSPC_130 2 0.502
#> HSPC_137 2 0.000
#> HSPC_143 2 1.000
#> HSPC_149 2 0.249
#> HSPC_155 2 0.502
#> HSPC_161 2 1.000
#> HSPC_167 2 0.498
#> LT-HSC_041 2 0.502
#> HSPC_131 2 1.000
#> HSPC_138 1 0.498
#> HSPC_144 1 0.253
#> HSPC_150 2 0.000
#> HSPC_156 1 1.000
#> HSPC_162 1 1.000
#> HSPC_168 1 0.000
#> LT-HSC_042 2 0.249
#> HSPC_132 1 0.249
#> Prog_133 1 0.253
#> Prog_139 1 0.000
#> Prog_145 1 0.000
#> Prog_151 1 1.000
#> Prog_157 1 0.000
#> Prog_163 1 0.000
#> LT-HSC_043 1 0.000
#> Prog_127 1 0.000
#> Prog_134 2 1.000
#> Prog_140 1 0.000
#> Prog_146 1 0.000
#> Prog_152 2 1.000
#> Prog_158 1 0.000
#> Prog_164 2 1.000
#> LT-HSC_044 2 0.751
#> Prog_128 1 0.000
#> Prog_135 1 1.000
#> Prog_141 1 0.000
#> Prog_147 2 0.000
#> Prog_153 1 0.000
#> Prog_159 1 0.000
#> Prog_165 2 1.000
#> LT-HSC_045 2 1.000
#> Prog_129 1 0.000
#> Prog_136 1 0.000
#> Prog_142 1 0.747
#> Prog_148 2 1.000
#> Prog_154 1 1.000
#> Prog_160 2 0.498
#> Prog_166 1 0.000
#> LT-HSC_046 2 0.000
#> Prog_130 1 0.000
#> Prog_137 1 0.253
#> Prog_143 1 0.000
#> Prog_149 1 0.000
#> Prog_155 1 0.000
#> Prog_161 1 0.000
#> Prog_167 1 0.000
#> LT-HSC_047 2 0.000
#> Prog_131 1 0.498
#> Prog_138 2 0.000
#> Prog_144 2 1.000
#> Prog_150 1 0.000
#> Prog_156 2 0.253
#> Prog_162 1 0.000
#> Prog_168 1 0.000
#> LT-HSC_048 2 1.000
#> Prog_132 1 0.000
#> HSPC_175 2 1.000
#> HSPC_181 2 0.000
#> HSPC_187 2 0.751
#> HSPC_193 1 0.000
#> HSPC_199 1 0.751
#> HSPC_205 2 1.000
#> LT-HSC_049 2 1.000
#> HSPC_169 2 0.000
#> HSPC_176 2 0.000
#> HSPC_182 2 0.000
#> HSPC_188 2 0.000
#> HSPC_194 2 0.000
#> HSPC_200 2 0.000
#> HSPC_206 1 0.000
#> LT-HSC_050 2 0.751
#> HSPC_170 2 0.249
#> HSPC_177 2 0.000
#> HSPC_183 1 1.000
#> HSPC_189 2 0.000
#> HSPC_195 1 0.000
#> HSPC_201 2 0.000
#> HSPC_207 1 0.498
#> LT-HSC_051 2 0.000
#> HSPC_171 2 0.249
#> HSPC_178 2 0.000
#> HSPC_184 2 0.747
#> HSPC_190 1 0.000
#> HSPC_196 2 0.000
#> HSPC_202 1 1.000
#> HSPC_208 2 0.249
#> LT-HSC_052 1 0.000
#> HSPC_172 1 0.498
#> HSPC_179 1 0.000
#> HSPC_185 2 0.502
#> HSPC_191 2 0.000
#> HSPC_197 2 0.000
#> HSPC_203 2 0.249
#> HSPC_209 2 0.498
#> LT-HSC_053 2 0.000
#> HSPC_173 2 0.000
#> HSPC_180 2 1.000
#> HSPC_186 1 0.000
#> HSPC_192 2 0.249
#> HSPC_198 2 0.000
#> HSPC_204 1 0.000
#> HSPC_210 2 0.751
#> LT-HSC_054 2 0.000
#> HSPC_174 1 1.000
#> Prog_175 1 0.000
#> Prog_181 2 0.498
#> Prog_187 1 0.249
#> Prog_193 2 0.000
#> Prog_199 1 0.498
#> Prog_205 1 0.000
#> LT-HSC_055 1 1.000
#> Prog_169 2 0.000
#> Prog_176 1 1.000
#> Prog_182 2 1.000
#> Prog_188 1 0.000
#> Prog_194 2 0.751
#> Prog_200 2 1.000
#> Prog_206 1 0.000
#> LT-HSC_056 1 0.000
#> Prog_170 1 0.000
#> Prog_177 1 0.751
#> Prog_183 1 0.253
#> Prog_189 1 0.502
#> Prog_195 2 0.502
#> Prog_201 1 0.000
#> Prog_207 1 0.000
#> LT-HSC_057 2 0.000
#> Prog_171 2 1.000
#> Prog_178 1 0.000
#> Prog_184 1 0.000
#> Prog_190 1 0.000
#> Prog_196 1 0.000
#> Prog_202 2 0.000
#> Prog_208 1 0.751
#> LT-HSC_058 1 1.000
#> Prog_172 1 0.000
#> Prog_179 1 0.000
#> Prog_185 1 0.000
#> Prog_191 1 0.751
#> Prog_197 1 0.000
#> Prog_203 1 1.000
#> Prog_209 1 0.000
#> LT-HSC_059 2 0.747
#> Prog_173 2 1.000
#> Prog_180 1 1.000
#> Prog_186 1 0.502
#> Prog_192 1 0.000
#> Prog_198 2 0.000
#> Prog_204 2 0.249
#> Prog_210 1 1.000
#> LT-HSC_060 1 0.000
#> Prog_174 2 0.000
#> HSPC_217 2 0.000
#> HSPC_223 2 0.000
#> HSPC_229 2 0.751
#> HSPC_235 2 0.000
#> HSPC_241 2 0.000
#> HSPC_247 2 0.747
#> LT-HSC_061 2 0.000
#> HSPC_211 2 1.000
#> HSPC_218 2 0.498
#> HSPC_224 2 0.000
#> HSPC_230 2 0.751
#> HSPC_236 2 1.000
#> HSPC_242 2 0.498
#> HSPC_248 2 0.498
#> LT-HSC_062 2 0.000
#> HSPC_212 2 0.000
#> HSPC_219 1 1.000
#> HSPC_225 2 0.498
#> HSPC_231 2 0.498
#> HSPC_237 2 0.249
#> HSPC_243 1 0.000
#> HSPC_249 2 0.249
#> LT-HSC_063 1 0.000
#> HSPC_213 1 0.000
#> HSPC_220 2 1.000
#> HSPC_226 2 0.000
#> HSPC_232 2 0.000
#> HSPC_238 2 0.747
#> HSPC_244 1 1.000
#> HSPC_250 1 0.000
#> LT-HSC_064 1 0.000
#> HSPC_214 1 0.000
#> HSPC_221 2 0.000
#> HSPC_227 2 0.253
#> HSPC_233 2 0.249
#> HSPC_239 2 1.000
#> HSPC_245 2 0.253
#> HSPC_251 1 0.253
#> LT-HSC_065 2 0.000
#> HSPC_215 2 1.000
#> HSPC_222 2 0.000
#> HSPC_228 2 0.751
#> HSPC_234 2 0.000
#> HSPC_240 1 0.751
#> HSPC_246 2 0.253
#> HSPC_252 2 0.000
#> LT-HSC_066 2 0.000
#> HSPC_216 1 0.249
#> Prog_217 1 0.000
#> Prog_223 2 0.751
#> Prog_229 1 0.000
#> Prog_235 2 1.000
#> Prog_241 2 0.751
#> Prog_247 1 0.000
#> LT-HSC_067 2 0.000
#> Prog_211 1 0.000
#> Prog_218 1 0.000
#> Prog_224 1 0.000
#> Prog_230 1 0.000
#> Prog_236 1 0.751
#> Prog_242 1 0.000
#> Prog_248 2 0.249
#> LT-HSC_068 1 1.000
#> Prog_212 1 0.000
#> Prog_219 2 0.249
#> Prog_225 1 0.498
#> Prog_231 1 0.498
#> Prog_237 2 0.249
#> Prog_243 1 0.249
#> Prog_249 1 0.000
#> LT-HSC_069 1 1.000
#> Prog_213 1 0.502
#> Prog_220 2 0.751
#> Prog_226 1 1.000
#> Prog_232 1 0.000
#> Prog_238 1 0.000
#> Prog_244 1 1.000
#> Prog_250 1 0.000
#> LT-HSC_070 2 1.000
#> Prog_214 1 0.000
#> Prog_221 1 0.000
#> Prog_227 1 0.000
#> Prog_233 1 0.000
#> Prog_239 1 0.000
#> Prog_245 1 1.000
#> Prog_251 2 1.000
#> LT-HSC_071 1 1.000
#> Prog_215 1 0.000
#> Prog_222 1 1.000
#> Prog_228 1 0.000
#> Prog_234 1 0.249
#> Prog_240 1 0.747
#> Prog_246 1 0.000
#> Prog_252 1 0.751
#> LT-HSC_072 1 0.000
#> Prog_216 1 0.000
#> HSPC_259 2 0.000
#> HSPC_265 2 0.253
#> HSPC_271 1 0.000
#> HSPC_277 2 0.000
#> HSPC_283 2 0.249
#> HSPC_289 2 0.751
#> LT-HSC_073 2 0.000
#> HSPC_253 1 0.000
#> HSPC_260 2 0.000
#> HSPC_266 2 1.000
#> HSPC_272 2 0.000
#> HSPC_278 2 0.000
#> HSPC_284 2 0.000
#> HSPC_290 1 0.000
#> LT-HSC_074 2 0.253
#> HSPC_254 2 0.000
#> HSPC_261 1 1.000
#> HSPC_267 1 1.000
#> HSPC_273 2 0.249
#> HSPC_279 2 0.498
#> HSPC_285 1 0.000
#> HSPC_291 1 0.747
#> LT-HSC_075 1 1.000
#> HSPC_255 1 1.000
#> HSPC_262 2 0.000
#> HSPC_268 1 0.000
#> HSPC_274 2 0.000
#> HSPC_280 2 0.751
#> HSPC_286 2 0.000
#> HSPC_292 1 0.498
#> LT-HSC_076 2 0.498
#> HSPC_256 1 0.000
#> HSPC_263 2 1.000
#> HSPC_269 1 0.249
#> HSPC_275 1 0.000
#> HSPC_281 2 0.498
#> HSPC_287 1 0.000
#> HSPC_293 1 0.498
#> LT-HSC_077 2 0.000
#> HSPC_257 1 0.000
#> HSPC_264 2 0.000
#> HSPC_270 1 0.751
#> HSPC_276 1 0.747
#> HSPC_282 1 0.747
#> HSPC_288 1 0.000
#> HSPC_294 1 0.000
#> LT-HSC_078 2 0.000
#> HSPC_258 1 0.249
#> Prog_259 2 0.000
#> Prog_265 1 0.000
#> Prog_271 1 0.000
#> Prog_277 2 0.000
#> Prog_283 2 0.751
#> Prog_289 2 1.000
#> LT-HSC_079 2 0.249
#> Prog_253 1 0.000
#> Prog_260 1 0.000
#> Prog_266 1 0.747
#> Prog_272 1 0.000
#> Prog_278 1 0.000
#> Prog_284 1 0.000
#> Prog_290 1 0.000
#> LT-HSC_080 1 0.751
#> Prog_254 1 0.000
#> Prog_261 1 0.000
#> Prog_267 1 0.000
#> Prog_273 1 0.000
#> Prog_279 1 0.000
#> Prog_285 1 0.000
#> Prog_291 1 0.000
#> LT-HSC_081 1 1.000
#> Prog_255 1 0.000
#> Prog_262 1 0.502
#> Prog_268 1 0.000
#> Prog_274 1 0.000
#> Prog_280 1 1.000
#> Prog_286 1 0.000
#> Prog_292 1 1.000
#> LT-HSC_082 1 1.000
#> Prog_256 2 0.249
#> Prog_263 1 0.000
#> Prog_269 1 0.000
#> Prog_275 1 0.000
#> Prog_281 1 0.000
#> Prog_287 1 0.502
#> Prog_293 1 0.000
#> LT-HSC_083 2 0.000
#> Prog_257 2 1.000
#> Prog_264 2 0.000
#> Prog_270 1 0.000
#> Prog_276 1 1.000
#> Prog_282 1 0.000
#> Prog_288 1 0.000
#> Prog_294 1 0.751
#> LT-HSC_084 1 0.747
#> Prog_258 1 0.253
#> HSPC_301 2 0.498
#> HSPC_307 2 1.000
#> HSPC_313 2 1.000
#> HSPC_319 2 0.751
#> HSPC_325 2 0.249
#> HSPC_331 2 0.249
#> LT-HSC_085 2 0.502
#> HSPC_295 1 0.000
#> HSPC_302 2 1.000
#> HSPC_308 2 1.000
#> HSPC_314 2 1.000
#> HSPC_320 2 0.249
#> HSPC_326 2 0.249
#> HSPC_332 1 0.000
#> LT-HSC_086 2 1.000
#> HSPC_296 2 1.000
#> HSPC_303 1 0.000
#> HSPC_309 2 0.751
#> HSPC_315 2 0.000
#> HSPC_321 2 0.751
#> HSPC_327 1 0.000
#> HSPC_333 1 0.498
#> LT-HSC_087 2 0.502
#> HSPC_297 2 0.751
#> HSPC_304 1 0.498
#> HSPC_310 2 1.000
#> HSPC_316 2 1.000
#> HSPC_322 1 0.747
#> HSPC_328 2 0.249
#> HSPC_334 2 0.751
#> LT-HSC_088 2 1.000
#> HSPC_298 1 0.498
#> HSPC_305 1 0.249
#> HSPC_311 2 1.000
#> HSPC_317 2 0.253
#> HSPC_323 1 0.000
#> HSPC_329 2 0.502
#> HSPC_335 2 0.249
#> LT-HSC_089 2 0.751
#> HSPC_299 1 0.000
#> HSPC_306 1 0.747
#> HSPC_312 1 0.000
#> HSPC_318 2 0.249
#> HSPC_324 2 0.253
#> HSPC_330 2 0.000
#> HSPC_336 2 1.000
#> LT-HSC_090 1 1.000
#> HSPC_300 1 0.498
#> Prog_301 1 0.000
#> Prog_307 1 0.253
#> Prog_313 1 0.000
#> Prog_319 1 0.498
#> Prog_325 1 0.000
#> Prog_331 1 0.000
#> LT-HSC_091 1 0.000
#> Prog_295 1 0.000
#> Prog_302 2 1.000
#> Prog_308 1 0.751
#> Prog_314 1 0.751
#> Prog_320 1 0.000
#> Prog_326 1 0.000
#> Prog_332 1 0.751
#> LT-HSC_092 2 0.747
#> Prog_296 1 0.000
#> Prog_303 2 1.000
#> Prog_309 2 0.751
#> Prog_315 1 0.000
#> Prog_321 1 0.000
#> Prog_327 1 0.000
#> Prog_333 2 1.000
#> LT-HSC_093 2 0.000
#> Prog_297 2 1.000
#> Prog_304 1 0.000
#> Prog_310 2 0.747
#> Prog_316 1 0.000
#> Prog_322 2 0.751
#> Prog_328 1 0.498
#> Prog_334 1 0.000
#> LT-HSC_094 2 0.751
#> Prog_298 1 0.249
#> Prog_305 1 0.000
#> Prog_311 2 1.000
#> Prog_317 2 0.498
#> Prog_323 1 0.000
#> Prog_329 1 0.000
#> Prog_335 1 0.000
#> LT-HSC_095 1 0.000
#> Prog_299 1 0.000
#> Prog_306 2 0.000
#> Prog_312 1 0.000
#> Prog_318 1 0.000
#> Prog_324 1 0.000
#> Prog_330 1 1.000
#> Prog_336 1 0.249
#> LT-HSC_096 1 0.000
#> Prog_300 1 0.000
#> HSPC_343 1 0.000
#> HSPC_349 1 0.498
#> HSPC_355 2 0.000
#> HSPC_361 2 0.751
#> HSPC_367 2 0.751
#> HSPC_373 2 0.249
#> LT-HSC_097 2 0.751
#> HSPC_337 2 1.000
#> HSPC_344 1 0.000
#> HSPC_350 2 0.000
#> HSPC_356 2 0.249
#> HSPC_362 1 0.000
#> HSPC_368 1 0.249
#> HSPC_374 1 0.502
#> LT-HSC_098 1 0.000
#> HSPC_338 1 0.000
#> HSPC_345 2 0.747
#> HSPC_351 2 1.000
#> HSPC_357 2 0.000
#> HSPC_363 2 0.000
#> HSPC_369 2 0.000
#> HSPC_375 2 0.000
#> LT-HSC_099 2 0.502
#> HSPC_339 1 0.253
#> HSPC_346 1 0.000
#> HSPC_352 1 0.249
#> HSPC_358 1 0.000
#> HSPC_364 2 1.000
#> HSPC_370 1 0.000
#> HSPC_376 2 0.000
#> LT-HSC_100 1 0.000
#> HSPC_340 2 1.000
#> HSPC_347 2 0.000
#> HSPC_353 1 0.000
#> HSPC_359 1 0.502
#> HSPC_365 2 0.000
#> HSPC_371 1 0.000
#> HSPC_377 1 0.000
#> LT-HSC_101 2 1.000
#> HSPC_341 1 0.249
#> HSPC_348 1 0.000
#> HSPC_354 2 0.249
#> HSPC_360 2 1.000
#> HSPC_366 2 0.000
#> HSPC_372 1 0.747
#> HSPC_378 2 0.751
#> LT-HSC_102 1 0.000
#> HSPC_342 1 0.000
#> Prog_343 1 0.249
#> Prog_349 1 0.000
#> Prog_355 1 0.000
#> Prog_361 1 0.000
#> Prog_367 1 0.000
#> Prog_373 1 0.000
#> LT-HSC_103 1 1.000
#> Prog_337 1 0.000
#> Prog_344 2 0.000
#> Prog_350 1 0.000
#> Prog_356 1 0.000
#> Prog_362 1 0.000
#> Prog_368 1 0.000
#> Prog_374 1 0.000
#> LT-HSC_104 2 0.000
#> Prog_338 1 1.000
#> Prog_345 1 0.000
#> Prog_351 1 0.000
#> Prog_357 1 0.000
#> Prog_363 1 0.000
#> Prog_369 1 0.000
#> Prog_375 1 0.000
#> LT-HSC_105 1 0.000
#> Prog_339 1 0.000
#> Prog_346 1 0.000
#> Prog_352 1 0.000
#> Prog_358 2 0.253
#> Prog_364 1 0.000
#> Prog_370 1 0.253
#> Prog_376 1 0.000
#> LT-HSC_106 1 0.000
#> Prog_340 1 0.000
#> Prog_347 2 0.498
#> Prog_353 1 0.000
#> Prog_359 1 0.000
#> Prog_365 2 0.747
#> Prog_371 1 0.249
#> Prog_377 1 0.000
#> LT-HSC_107 2 0.747
#> Prog_341 1 0.000
#> Prog_348 2 0.000
#> Prog_354 1 0.000
#> Prog_360 1 0.000
#> Prog_366 1 0.000
#> Prog_372 1 0.000
#> Prog_378 1 0.000
#> LT-HSC_108 1 0.000
#> Prog_342 1 0.000
#> HSPC_385 2 1.000
#> HSPC_391 1 0.000
#> HSPC_397 2 0.000
#> HSPC_403 1 1.000
#> HSPC_409 2 0.000
#> HSPC_415 2 0.000
#> HSPC_421 1 0.000
#> HSPC_379 2 0.000
#> HSPC_386 2 0.249
#> HSPC_392 1 1.000
#> HSPC_398 1 0.502
#> HSPC_404 1 0.000
#> HSPC_410 1 0.000
#> HSPC_416 1 0.249
#> HSPC_422 1 1.000
#> HSPC_380 1 0.000
#> HSPC_387 1 0.000
#> HSPC_393 1 0.000
#> HSPC_399 2 0.751
#> HSPC_405 1 1.000
#> HSPC_411 1 0.000
#> HSPC_417 1 1.000
#> HSPC_423 1 0.000
#> HSPC_381 2 0.000
#> HSPC_388 1 1.000
#> HSPC_394 2 0.000
#> HSPC_400 1 1.000
#> HSPC_406 2 0.000
#> HSPC_412 1 0.000
#> HSPC_418 1 1.000
#> HSPC_424 1 1.000
#> HSPC_382 1 0.000
#> HSPC_389 1 0.000
#> HSPC_395 2 0.751
#> HSPC_401 2 0.249
#> HSPC_407 1 0.253
#> HSPC_413 1 0.751
#> HSPC_419 1 0.000
#> HSPC_425 1 0.000
#> HSPC_383 2 0.747
#> HSPC_390 2 1.000
#> HSPC_396 1 1.000
#> HSPC_402 1 1.000
#> HSPC_408 1 0.000
#> HSPC_414 2 0.249
#> HSPC_420 1 1.000
#> HSPC_426 2 0.249
#> HSPC_384 2 0.000
#> Prog_385 1 0.000
#> Prog_391 2 0.751
#> Prog_397 1 0.000
#> Prog_403 1 0.000
#> Prog_409 1 0.000
#> Prog_415 1 0.000
#> Prog_421 1 0.000
#> Prog_379 1 0.000
#> Prog_386 1 0.000
#> Prog_392 1 1.000
#> Prog_398 1 0.000
#> Prog_404 1 0.000
#> Prog_410 1 0.000
#> Prog_416 1 0.000
#> Prog_422 1 0.000
#> Prog_380 1 0.000
#> Prog_387 1 0.000
#> Prog_393 1 0.000
#> Prog_399 1 0.000
#> Prog_405 1 0.253
#> Prog_411 2 0.751
#> Prog_417 1 0.000
#> Prog_423 1 0.000
#> Prog_381 1 0.000
#> Prog_388 1 0.000
#> Prog_394 1 0.000
#> Prog_400 2 0.000
#> Prog_406 1 0.000
#> Prog_412 1 0.000
#> Prog_418 1 0.000
#> Prog_424 1 0.000
#> Prog_382 1 0.751
#> Prog_389 1 0.000
#> Prog_395 1 0.000
#> Prog_401 1 0.000
#> Prog_407 1 0.000
#> Prog_413 1 0.502
#> Prog_419 1 0.000
#> Prog_425 1 0.000
#> Prog_383 1 0.000
#> Prog_390 2 1.000
#> Prog_396 1 0.000
#> Prog_402 1 0.000
#> Prog_408 1 0.000
#> Prog_414 1 0.000
#> Prog_420 1 0.000
#> Prog_426 1 0.000
#> Prog_384 1 0.000
#> HSPC_433 2 0.249
#> HSPC_439 2 0.253
#> HSPC_445 2 0.000
#> HSPC_451 2 0.000
#> HSPC_457 2 0.000
#> HSPC_463 1 1.000
#> LT-HSC_109 2 0.000
#> HSPC_427 2 0.498
#> HSPC_434 2 0.249
#> HSPC_440 2 1.000
#> HSPC_446 2 0.498
#> HSPC_452 2 0.000
#> HSPC_458 2 0.249
#> HSPC_464 2 0.000
#> LT-HSC_110 2 0.000
#> HSPC_428 2 0.000
#> HSPC_435 2 0.000
#> HSPC_441 1 1.000
#> HSPC_447 1 0.000
#> HSPC_453 1 1.000
#> HSPC_459 1 0.000
#> HSPC_465 2 0.000
#> LT-HSC_111 2 0.000
#> HSPC_429 2 0.000
#> HSPC_436 1 0.000
#> HSPC_442 1 1.000
#> HSPC_448 1 1.000
#> HSPC_454 1 1.000
#> HSPC_460 1 0.249
#> HSPC_466 2 0.253
#> LT-HSC_112 1 1.000
#> HSPC_430 1 1.000
#> HSPC_437 2 0.000
#> HSPC_443 2 0.253
#> HSPC_449 2 0.000
#> HSPC_455 2 0.502
#> HSPC_461 2 0.000
#> HSPC_467 1 1.000
#> LT-HSC_113 1 1.000
#> HSPC_431 2 0.000
#> HSPC_438 2 0.000
#> HSPC_444 2 0.000
#> HSPC_450 2 0.000
#> HSPC_456 1 1.000
#> HSPC_462 1 1.000
#> HSPC_468 1 1.000
#> LT-HSC_114 2 0.000
#> HSPC_432 2 0.253
#> Prog_433 2 0.000
#> Prog_439 1 1.000
#> Prog_445 1 0.249
#> Prog_451 1 0.000
#> Prog_457 1 0.000
#> Prog_463 1 0.000
#> LT-HSC_115 1 0.498
#> Prog_427 2 0.000
#> Prog_434 1 0.000
#> Prog_440 1 0.751
#> Prog_446 1 1.000
#> Prog_452 2 0.000
#> Prog_458 2 1.000
#> Prog_464 1 1.000
#> LT-HSC_116 2 0.249
#> Prog_428 1 0.502
#> Prog_435 1 0.000
#> Prog_441 1 0.000
#> Prog_447 1 0.000
#> Prog_453 1 0.000
#> Prog_459 1 0.249
#> Prog_465 2 0.498
#> LT-HSC_117 2 0.000
#> Prog_429 1 0.000
#> Prog_436 1 0.249
#> Prog_442 2 0.498
#> Prog_448 1 0.502
#> Prog_454 1 0.000
#> Prog_460 2 1.000
#> Prog_466 1 0.000
#> LT-HSC_118 2 0.751
#> Prog_430 1 0.000
#> Prog_437 1 0.249
#> Prog_443 1 0.000
#> Prog_449 1 0.000
#> Prog_455 1 1.000
#> Prog_461 2 0.000
#> Prog_467 1 1.000
#> LT-HSC_119 2 0.000
#> Prog_431 1 0.502
#> Prog_438 2 0.000
#> Prog_444 1 0.000
#> Prog_450 1 0.000
#> Prog_456 1 0.000
#> Prog_462 2 0.249
#> Prog_468 1 0.000
#> LT-HSC_120 1 0.502
#> Prog_432 2 1.000
#> HSPC_475 2 0.000
#> HSPC_481 2 0.249
#> HSPC_487 2 0.000
#> HSPC_493 2 0.502
#> HSPC_499 2 0.249
#> HSPC_505 2 0.000
#> LT-HSC_121 2 0.000
#> HSPC_469 2 0.000
#> HSPC_476 2 0.000
#> HSPC_482 2 0.249
#> HSPC_488 2 1.000
#> HSPC_494 2 0.253
#> HSPC_500 2 0.000
#> HSPC_506 2 0.000
#> LT-HSC_122 2 0.253
#> HSPC_470 2 1.000
#> HSPC_477 1 1.000
#> HSPC_483 2 0.000
#> HSPC_489 1 1.000
#> HSPC_495 2 1.000
#> HSPC_501 2 1.000
#> HSPC_507 2 0.000
#> LT-HSC_123 2 0.000
#> HSPC_471 2 0.000
#> HSPC_478 2 0.000
#> HSPC_484 2 0.000
#> HSPC_490 2 0.000
#> HSPC_496 2 0.000
#> HSPC_502 1 0.751
#> HSPC_508 1 0.000
#> LT-HSC_124 2 1.000
#> HSPC_472 1 1.000
#> HSPC_479 1 1.000
#> HSPC_485 1 0.000
#> HSPC_491 1 0.253
#> HSPC_497 2 0.000
#> HSPC_503 1 0.000
#> HSPC_509 2 0.000
#> LT-HSC_125 1 1.000
#> HSPC_473 1 1.000
#> HSPC_480 1 0.000
#> HSPC_486 2 0.000
#> HSPC_492 1 0.249
#> HSPC_498 1 0.751
#> HSPC_504 2 0.253
#> HSPC_510 1 0.000
#> LT-HSC_126 1 1.000
#> HSPC_474 1 0.498
#> Prog_475 1 0.000
#> Prog_481 1 0.502
#> Prog_487 1 0.000
#> Prog_493 1 0.498
#> Prog_499 1 0.000
#> Prog_505 1 0.000
#> LT-HSC_127 2 0.000
#> Prog_469 2 0.498
#> Prog_476 1 0.249
#> Prog_482 1 0.747
#> Prog_488 1 0.249
#> Prog_494 2 1.000
#> Prog_500 1 0.000
#> Prog_506 1 0.000
#> LT-HSC_128 1 0.751
#> Prog_470 1 0.000
#> Prog_477 1 0.000
#> Prog_483 2 1.000
#> Prog_489 1 0.502
#> Prog_495 1 0.751
#> Prog_501 1 1.000
#> Prog_507 1 0.000
#> LT-HSC_129 2 0.000
#> Prog_471 1 0.000
#> Prog_478 1 0.000
#> Prog_484 1 0.000
#> Prog_490 2 1.000
#> Prog_496 1 1.000
#> Prog_502 1 0.000
#> Prog_508 1 0.000
#> LT-HSC_130 1 1.000
#> Prog_472 2 0.249
#> Prog_479 1 0.498
#> Prog_485 1 0.249
#> Prog_491 1 0.000
#> Prog_497 1 0.000
#> Prog_503 2 0.747
#> Prog_509 1 0.751
#> LT-HSC_131 2 0.000
#> Prog_473 1 0.000
#> Prog_480 2 1.000
#> Prog_486 1 0.000
#> Prog_492 2 1.000
#> Prog_498 2 0.000
#> Prog_504 1 0.000
#> Prog_510 2 0.253
#> LT-HSC_132 1 0.000
#> Prog_474 1 1.000
#> HSPC_517 2 0.000
#> HSPC_523 1 0.502
#> HSPC_529 2 0.000
#> HSPC_535 2 1.000
#> HSPC_541 2 0.751
#> HSPC_547 1 0.747
#> LT-HSC_133 2 0.000
#> HSPC_511 2 0.249
#> HSPC_518 2 0.000
#> HSPC_524 2 0.000
#> HSPC_530 2 0.000
#> HSPC_536 2 0.000
#> HSPC_542 2 0.000
#> HSPC_548 2 0.000
#> LT-HSC_134 2 0.249
#> HSPC_512 1 1.000
#> HSPC_519 2 0.000
#> HSPC_525 2 0.000
#> HSPC_531 2 0.498
#> HSPC_537 2 0.747
#> HSPC_543 2 0.000
#> HSPC_549 2 0.000
#> LT-HSC_135 2 0.000
#> HSPC_513 2 0.000
#> HSPC_520 2 0.000
#> HSPC_526 1 1.000
#> HSPC_532 1 0.249
#> HSPC_538 1 1.000
#> HSPC_544 1 0.000
#> HSPC_550 2 0.502
#> LT-HSC_136 2 0.000
#> HSPC_514 2 0.000
#> HSPC_521 2 0.000
#> HSPC_527 1 0.751
#> HSPC_533 1 1.000
#> HSPC_539 2 0.000
#> HSPC_545 2 0.249
#> HSPC_551 2 0.000
#> LT-HSC_137 2 0.000
#> HSPC_515 1 1.000
#> HSPC_522 2 0.249
#> HSPC_528 1 0.000
#> HSPC_534 2 0.000
#> HSPC_540 1 0.751
#> HSPC_546 2 0.000
#> HSPC_552 2 0.000
#> LT-HSC_138 2 0.502
#> HSPC_516 1 1.000
#> Prog_517 1 0.000
#> Prog_523 1 0.000
#> Prog_529 1 0.000
#> Prog_535 1 0.000
#> Prog_541 1 0.000
#> Prog_547 1 0.000
#> LT-HSC_139 2 0.000
#> Prog_511 1 1.000
#> Prog_518 1 0.000
#> Prog_524 2 0.751
#> Prog_530 1 0.000
#> Prog_536 1 0.000
#> Prog_542 1 0.000
#> Prog_548 1 0.000
#> LT-HSC_140 2 0.000
#> Prog_512 1 0.000
#> Prog_519 2 0.249
#> Prog_525 2 1.000
#> Prog_531 1 0.000
#> Prog_537 2 0.498
#> Prog_543 1 0.000
#> Prog_549 1 0.000
#> LT-HSC_141 2 0.000
#> Prog_513 1 0.000
#> Prog_520 1 0.000
#> Prog_526 2 0.751
#> Prog_532 2 0.751
#> Prog_538 2 0.502
#> Prog_544 2 0.498
#> Prog_550 1 0.000
#> LT-HSC_142 1 0.000
#> Prog_514 1 0.000
#> Prog_521 1 0.000
#> Prog_527 1 0.000
#> Prog_533 2 1.000
#> Prog_539 1 0.000
#> Prog_545 1 0.000
#> Prog_551 1 0.000
#> LT-HSC_143 1 0.751
#> Prog_515 2 0.502
#> Prog_522 2 0.000
#> Prog_528 1 0.000
#> Prog_534 2 1.000
#> Prog_540 2 0.000
#> Prog_546 2 0.747
#> Prog_552 1 0.000
#> LT-HSC_144 1 0.498
#> Prog_516 1 0.000
#> HSPC_559 2 0.000
#> HSPC_565 2 0.000
#> HSPC_571 1 0.498
#> HSPC_577 2 0.000
#> HSPC_583 2 0.000
#> HSPC_589 2 0.000
#> LT-HSC_145 2 1.000
#> HSPC_553 1 0.747
#> HSPC_560 2 0.000
#> HSPC_566 2 0.000
#> HSPC_572 2 0.000
#> HSPC_578 2 0.000
#> HSPC_584 2 0.000
#> HSPC_590 1 1.000
#> LT-HSC_146 2 0.000
#> HSPC_554 2 0.000
#> HSPC_561 2 0.000
#> HSPC_567 1 0.751
#> HSPC_573 2 0.000
#> HSPC_579 2 0.000
#> HSPC_585 2 0.000
#> HSPC_591 2 0.000
#> LT-HSC_147 2 0.000
#> HSPC_555 2 0.000
#> HSPC_562 2 0.000
#> HSPC_568 2 0.249
#> HSPC_574 1 0.000
#> HSPC_580 1 1.000
#> HSPC_586 1 1.000
#> HSPC_592 1 1.000
#> LT-HSC_148 2 0.498
#> HSPC_556 1 1.000
#> HSPC_563 2 0.249
#> HSPC_569 1 0.000
#> HSPC_575 1 1.000
#> HSPC_581 2 0.249
#> HSPC_587 2 0.498
#> HSPC_593 2 0.751
#> LT-HSC_149 2 0.498
#> HSPC_557 1 1.000
#> HSPC_564 2 0.000
#> HSPC_570 2 0.000
#> HSPC_576 2 0.498
#> HSPC_582 2 0.249
#> HSPC_588 2 0.000
#> HSPC_594 2 0.502
#> LT-HSC_150 2 0.000
#> HSPC_558 2 0.000
#> Prog_559 1 0.000
#> Prog_565 1 0.502
#> Prog_571 1 0.000
#> Prog_577 1 0.000
#> Prog_583 2 1.000
#> Prog_589 2 0.000
#> LT-HSC_151 1 1.000
#> Prog_553 2 1.000
#> Prog_560 1 0.000
#> Prog_566 1 0.000
#> Prog_572 1 0.751
#> Prog_578 1 0.000
#> Prog_584 1 0.000
#> Prog_590 1 0.000
#> LT-HSC_152 2 0.000
#> Prog_554 2 0.000
#> Prog_561 1 0.751
#> Prog_567 1 0.000
#> Prog_573 2 0.000
#> Prog_579 1 0.253
#> Prog_585 1 0.249
#> Prog_591 2 0.249
#> LT-HSC_153 2 0.000
#> Prog_555 1 1.000
#> Prog_562 1 0.000
#> Prog_568 1 0.000
#> Prog_574 1 0.000
#> Prog_580 1 0.249
#> Prog_586 2 0.751
#> Prog_592 1 0.000
#> LT-HSC_154 2 0.000
#> Prog_556 1 0.249
#> Prog_563 2 0.498
#> Prog_569 1 0.498
#> Prog_575 1 0.000
#> Prog_581 1 0.000
#> Prog_587 1 0.249
#> Prog_593 1 0.249
#> LT-HSC_155 2 0.000
#> Prog_557 1 0.000
#> Prog_564 1 1.000
#> Prog_570 1 0.000
#> Prog_576 1 0.249
#> Prog_582 1 0.000
#> Prog_588 1 1.000
#> Prog_594 1 0.000
#> LT-HSC_156 1 0.747
#> Prog_558 2 0.502
#> HSPC_601 2 0.249
#> HSPC_607 2 0.000
#> HSPC_613 2 0.249
#> HSPC_619 2 0.000
#> HSPC_625 2 0.000
#> HSPC_631 1 0.502
#> LT-HSC_157 2 0.000
#> HSPC_595 1 1.000
#> HSPC_602 2 0.249
#> HSPC_608 2 0.000
#> HSPC_614 2 0.751
#> HSPC_620 2 1.000
#> HSPC_626 2 0.000
#> HSPC_632 2 0.249
#> LT-HSC_158 2 0.249
#> HSPC_596 2 0.253
#> HSPC_603 1 0.249
#> HSPC_609 2 0.000
#> HSPC_615 2 0.000
#> HSPC_621 2 0.000
#> HSPC_627 2 0.000
#> HSPC_633 2 0.000
#> LT-HSC_159 1 0.000
#> HSPC_597 2 0.249
#> HSPC_604 2 0.000
#> HSPC_610 2 0.000
#> HSPC_616 2 0.000
#> HSPC_622 2 0.000
#> HSPC_628 2 0.253
#> HSPC_634 2 0.000
#> LT-HSC_160 2 0.000
#> HSPC_598 2 0.000
#> HSPC_605 2 0.000
#> HSPC_611 2 0.000
#> HSPC_617 1 1.000
#> HSPC_623 2 0.498
#> HSPC_629 2 0.751
#> HSPC_635 2 0.000
#> LT-HSC_161 2 0.000
#> HSPC_599 2 0.000
#> HSPC_606 2 0.498
#> HSPC_612 2 0.253
#> HSPC_618 2 0.000
#> HSPC_624 1 1.000
#> HSPC_630 2 1.000
#> HSPC_636 1 0.498
#> LT-HSC_162 2 0.000
#> HSPC_600 2 0.502
#> Prog_601 2 0.000
#> Prog_607 1 0.000
#> Prog_613 1 0.502
#> Prog_619 2 1.000
#> Prog_625 1 0.000
#> Prog_631 1 1.000
#> LT-HSC_163 2 0.000
#> Prog_595 2 0.249
#> Prog_602 1 1.000
#> Prog_608 1 0.000
#> Prog_614 1 1.000
#> Prog_620 2 0.751
#> Prog_626 1 0.000
#> Prog_632 1 0.498
#> LT-HSC_164 2 0.000
#> Prog_596 1 0.502
#> Prog_603 1 0.000
#> Prog_609 1 1.000
#> Prog_615 1 0.000
#> Prog_621 1 0.000
#> Prog_627 2 0.000
#> Prog_633 2 1.000
#> LT-HSC_165 2 0.000
#> Prog_597 1 1.000
#> Prog_604 1 0.000
#> Prog_610 1 0.498
#> Prog_616 1 0.000
#> Prog_622 1 0.000
#> Prog_628 1 0.249
#> Prog_634 2 1.000
#> LT-HSC_166 1 0.747
#> Prog_598 1 0.000
#> Prog_605 1 0.000
#> Prog_611 1 0.498
#> Prog_617 1 0.000
#> Prog_623 1 0.000
#> Prog_629 1 0.249
#> Prog_635 1 1.000
#> LT-HSC_167 2 0.000
#> Prog_599 1 0.249
#> Prog_606 2 0.000
#> Prog_612 1 1.000
#> Prog_618 1 0.498
#> Prog_624 1 0.000
#> Prog_630 1 0.000
#> Prog_636 2 0.000
#> LT-HSC_168 1 0.000
#> Prog_600 1 0.498
#> HSPC_643 2 0.249
#> HSPC_649 1 0.751
#> HSPC_655 2 0.751
#> HSPC_661 2 0.000
#> HSPC_667 2 0.253
#> HSPC_673 2 0.249
#> LT-HSC_169 2 0.502
#> HSPC_637 2 0.000
#> HSPC_644 1 1.000
#> HSPC_650 2 0.000
#> HSPC_656 2 0.000
#> HSPC_662 2 0.000
#> HSPC_668 1 0.249
#> HSPC_674 1 1.000
#> LT-HSC_170 2 0.000
#> HSPC_638 1 1.000
#> HSPC_645 1 1.000
#> HSPC_651 1 0.249
#> HSPC_657 2 0.000
#> HSPC_663 1 0.502
#> HSPC_669 2 0.000
#> HSPC_675 2 0.000
#> LT-HSC_171 2 0.000
#> HSPC_639 2 0.000
#> HSPC_646 2 0.000
#> HSPC_652 2 0.000
#> HSPC_658 1 0.000
#> HSPC_664 1 1.000
#> HSPC_670 2 0.000
#> HSPC_676 2 0.000
#> LT-HSC_172 2 0.000
#> HSPC_640 1 1.000
#> HSPC_647 2 0.000
#> HSPC_653 2 0.000
#> HSPC_659 2 0.000
#> HSPC_665 2 0.000
#> HSPC_671 1 0.498
#> HSPC_677 2 0.000
#> LT-HSC_173 2 0.000
#> HSPC_641 1 1.000
#> HSPC_648 2 0.000
#> HSPC_654 2 0.249
#> HSPC_660 2 0.249
#> HSPC_666 1 0.000
#> HSPC_672 1 0.747
#> HSPC_678 2 0.000
#> LT-HSC_174 1 1.000
#> HSPC_642 2 0.000
#> Prog_643 1 0.000
#> Prog_649 1 0.000
#> Prog_655 1 0.000
#> Prog_661 1 0.000
#> Prog_667 1 1.000
#> Prog_673 1 0.502
#> LT-HSC_175 2 0.000
#> Prog_637 1 0.000
#> Prog_644 1 0.498
#> Prog_650 1 0.000
#> Prog_656 1 0.249
#> Prog_662 1 0.751
#> Prog_668 2 0.502
#> Prog_674 1 0.000
#> LT-HSC_176 2 0.000
#> Prog_638 1 0.000
#> Prog_645 2 0.498
#> Prog_651 1 0.498
#> Prog_657 1 0.000
#> Prog_663 1 0.000
#> Prog_669 2 0.000
#> Prog_675 1 0.000
#> LT-HSC_177 2 1.000
#> Prog_639 1 0.000
#> Prog_646 1 0.000
#> Prog_652 1 0.000
#> Prog_658 1 0.249
#> Prog_664 2 0.249
#> Prog_670 1 0.249
#> Prog_676 1 0.751
#> LT-HSC_178 2 0.000
#> Prog_640 1 0.000
#> Prog_647 2 0.000
#> Prog_653 2 0.249
#> Prog_659 1 0.000
#> Prog_665 1 1.000
#> Prog_671 1 0.747
#> Prog_677 1 0.000
#> LT-HSC_179 1 1.000
#> Prog_641 2 0.751
#> Prog_648 1 0.249
#> Prog_654 1 1.000
#> Prog_660 1 0.498
#> Prog_666 1 0.000
#> Prog_672 1 1.000
#> Prog_678 1 0.000
#> LT-HSC_180 2 1.000
#> Prog_642 1 0.249
#> HSPC_685 2 0.000
#> HSPC_691 2 0.249
#> HSPC_697 1 0.000
#> HSPC_703 2 0.000
#> HSPC_709 2 0.751
#> HSPC_715 2 0.000
#> LT-HSC_181 2 0.000
#> HSPC_679 2 1.000
#> HSPC_686 2 0.000
#> HSPC_692 2 0.000
#> HSPC_698 2 0.253
#> HSPC_704 2 0.000
#> HSPC_710 2 0.000
#> HSPC_716 2 0.000
#> LT-HSC_182 2 0.000
#> HSPC_680 2 1.000
#> HSPC_687 2 0.498
#> HSPC_693 2 0.000
#> HSPC_699 2 1.000
#> HSPC_705 1 0.502
#> HSPC_711 2 0.000
#> HSPC_717 1 0.253
#> LT-HSC_183 2 0.000
#> HSPC_681 2 0.000
#> HSPC_688 2 0.000
#> HSPC_694 2 0.000
#> HSPC_700 1 0.000
#> HSPC_706 1 0.747
#> HSPC_712 2 0.000
#> HSPC_718 2 0.000
#> LT-HSC_184 2 0.000
#> HSPC_682 1 0.000
#> HSPC_689 2 1.000
#> HSPC_695 1 0.000
#> HSPC_701 1 0.751
#> HSPC_707 1 0.747
#> HSPC_713 2 0.000
#> HSPC_719 2 0.000
#> LT-HSC_185 2 0.000
#> HSPC_683 1 1.000
#> HSPC_690 2 0.253
#> HSPC_696 2 0.249
#> HSPC_702 2 0.249
#> HSPC_708 2 0.253
#> HSPC_714 2 0.000
#> HSPC_720 1 0.000
#> LT-HSC_186 2 0.000
#> HSPC_684 2 0.253
#> Prog_685 1 0.000
#> Prog_691 2 0.000
#> Prog_697 1 0.000
#> Prog_703 2 1.000
#> Prog_709 1 0.000
#> Prog_715 1 0.000
#> LT-HSC_187 2 0.000
#> Prog_679 1 0.249
#> Prog_686 1 0.000
#> Prog_692 1 1.000
#> Prog_698 1 0.249
#> Prog_704 1 1.000
#> Prog_710 1 0.747
#> Prog_716 1 1.000
#> LT-HSC_188 2 0.000
#> Prog_680 1 1.000
#> Prog_687 1 0.000
#> Prog_693 1 1.000
#> Prog_699 1 0.751
#> Prog_705 1 1.000
#> Prog_711 1 0.249
#> Prog_717 1 0.249
#> LT-HSC_189 2 0.249
#> Prog_681 1 0.000
#> Prog_688 1 0.253
#> Prog_694 1 0.502
#> Prog_700 1 0.000
#> Prog_706 1 0.000
#> Prog_712 1 1.000
#> Prog_718 1 0.747
#> LT-HSC_190 2 0.498
#> Prog_682 1 0.249
#> Prog_689 1 0.502
#> Prog_695 1 0.000
#> Prog_701 1 0.000
#> Prog_707 1 0.249
#> Prog_713 1 0.000
#> Prog_719 1 0.000
#> LT-HSC_191 2 0.000
#> Prog_683 2 1.000
#> Prog_690 1 0.751
#> Prog_696 1 0.000
#> Prog_702 1 0.000
#> Prog_708 1 0.000
#> Prog_714 1 0.000
#> Prog_720 1 0.502
#> LT-HSC_192 1 1.000
#> Prog_684 1 1.000
#> HSPC_727 2 0.000
#> HSPC_733 2 0.000
#> HSPC_739 2 0.498
#> HSPC_745 2 0.502
#> HSPC_751 2 0.751
#> HSPC_757 2 0.000
#> LT-HSC_193 2 0.000
#> HSPC_721 2 0.498
#> HSPC_728 2 0.000
#> HSPC_734 1 0.000
#> HSPC_740 2 0.000
#> HSPC_746 2 1.000
#> HSPC_752 2 0.751
#> HSPC_758 1 1.000
#> LT-HSC_194 2 0.000
#> HSPC_722 2 0.000
#> HSPC_729 1 1.000
#> HSPC_735 2 0.000
#> HSPC_741 2 0.249
#> HSPC_747 2 1.000
#> HSPC_753 1 1.000
#> HSPC_759 1 0.249
#> LT-HSC_195 1 1.000
#> HSPC_723 1 1.000
#> HSPC_730 2 0.000
#> HSPC_736 1 1.000
#> HSPC_742 1 1.000
#> HSPC_748 2 0.000
#> HSPC_754 2 0.000
#> HSPC_760 1 0.751
#> LT-HSC_196 2 0.000
#> HSPC_724 1 1.000
#> HSPC_731 1 0.747
#> HSPC_737 1 0.000
#> HSPC_743 1 0.502
#> HSPC_749 2 0.000
#> HSPC_755 2 0.000
#> HSPC_761 1 1.000
#> LT-HSC_197 2 0.000
#> HSPC_725 2 0.000
#> HSPC_732 1 1.000
#> HSPC_738 2 0.000
#> HSPC_744 2 0.751
#> HSPC_750 1 0.751
#> HSPC_756 2 0.253
#> HSPC_762 2 0.751
#> LT-HSC_198 2 0.000
#> HSPC_726 2 0.000
#> Prog_727 1 0.000
#> Prog_733 1 0.000
#> Prog_739 1 0.000
#> Prog_745 1 1.000
#> Prog_751 1 0.000
#> Prog_757 1 0.000
#> LT-HSC_199 2 0.000
#> Prog_721 1 0.000
#> Prog_728 1 1.000
#> Prog_734 1 0.000
#> Prog_740 1 0.000
#> Prog_746 2 1.000
#> Prog_752 1 0.000
#> Prog_758 1 0.502
#> LT-HSC_200 2 0.000
#> Prog_722 1 0.000
#> Prog_729 2 0.249
#> Prog_735 1 0.000
#> Prog_741 2 0.249
#> Prog_747 1 0.751
#> Prog_753 1 0.000
#> Prog_759 1 0.000
#> LT-HSC_201 2 0.000
#> Prog_723 1 0.000
#> Prog_730 1 0.000
#> Prog_736 1 0.249
#> Prog_742 2 0.249
#> Prog_748 1 0.000
#> Prog_754 1 0.751
#> Prog_760 1 0.000
#> LT-HSC_202 2 0.000
#> Prog_724 1 0.000
#> Prog_731 1 0.000
#> Prog_737 1 1.000
#> Prog_743 1 0.000
#> Prog_749 2 0.751
#> Prog_755 2 0.249
#> Prog_761 1 0.000
#> LT-HSC_203 2 0.000
#> Prog_725 1 0.747
#> Prog_732 2 1.000
#> Prog_738 1 0.751
#> Prog_744 1 0.000
#> Prog_750 1 0.249
#> Prog_756 2 0.751
#> Prog_762 1 1.000
#> LT-HSC_204 1 1.000
#> Prog_726 2 0.000
#> HSPC_769 2 1.000
#> HSPC_775 2 0.249
#> HSPC_781 2 0.000
#> HSPC_787 2 0.747
#> HSPC_793 2 0.747
#> HSPC_799 2 0.000
#> LT-HSC_205 2 0.000
#> HSPC_763 2 0.000
#> HSPC_770 2 1.000
#> HSPC_776 2 0.249
#> HSPC_782 2 0.502
#> HSPC_788 2 0.000
#> HSPC_794 1 1.000
#> HSPC_800 1 0.249
#> LT-HSC_206 2 0.000
#> HSPC_764 2 0.000
#> HSPC_771 1 1.000
#> HSPC_777 1 0.751
#> HSPC_783 2 0.751
#> HSPC_789 1 1.000
#> HSPC_795 1 1.000
#> HSPC_801 1 1.000
#> LT-HSC_207 2 1.000
#> HSPC_765 2 0.000
#> HSPC_772 2 0.249
#> HSPC_778 2 0.000
#> HSPC_784 2 0.000
#> HSPC_790 2 0.000
#> HSPC_796 1 0.000
#> HSPC_802 2 0.253
#> LT-HSC_208 2 0.000
#> HSPC_766 1 0.498
#> HSPC_773 1 1.000
#> HSPC_779 2 0.000
#> HSPC_785 2 0.249
#> HSPC_791 2 1.000
#> HSPC_797 1 1.000
#> HSPC_803 2 1.000
#> LT-HSC_209 2 0.000
#> HSPC_767 1 0.747
#> HSPC_774 1 0.249
#> HSPC_780 1 0.249
#> HSPC_786 1 1.000
#> HSPC_792 2 0.747
#> HSPC_798 2 0.000
#> HSPC_804 2 0.000
#> LT-HSC_210 2 0.000
#> HSPC_768 2 0.000
#> Prog_769 1 1.000
#> Prog_775 1 0.000
#> Prog_781 1 0.502
#> Prog_787 2 1.000
#> Prog_793 1 1.000
#> Prog_799 1 0.000
#> LT-HSC_211 2 0.000
#> Prog_763 1 1.000
#> Prog_770 1 0.000
#> Prog_776 1 0.000
#> Prog_782 1 1.000
#> Prog_788 1 0.000
#> Prog_794 1 0.000
#> Prog_800 1 0.253
#> LT-HSC_212 2 0.253
#> Prog_764 1 0.000
#> Prog_771 1 0.253
#> Prog_777 1 0.000
#> Prog_783 1 0.000
#> Prog_789 1 0.249
#> Prog_795 1 0.502
#> Prog_801 1 0.751
#> LT-HSC_213 2 0.000
#> Prog_765 1 0.000
#> Prog_772 1 0.249
#> Prog_778 2 1.000
#> Prog_784 1 1.000
#> Prog_790 1 0.000
#> Prog_796 1 0.000
#> Prog_802 1 0.000
#> LT-HSC_214 1 1.000
#> Prog_766 2 0.000
#> Prog_773 2 0.498
#> Prog_779 1 0.502
#> Prog_785 1 0.249
#> Prog_791 1 0.000
#> Prog_797 2 0.000
#> Prog_803 2 0.751
#> LT-HSC_215 1 1.000
#> Prog_767 1 0.000
#> Prog_774 1 0.000
#> Prog_780 1 0.000
#> Prog_786 1 0.000
#> Prog_792 1 0.000
#> Prog_798 1 0.751
#> Prog_804 1 0.751
#> LT-HSC_216 1 0.000
#> Prog_768 1 0.751
#> HSPC_811 2 0.000
#> HSPC_817 2 0.498
#> HSPC_823 2 0.000
#> HSPC_829 2 0.751
#> HSPC_835 1 1.000
#> HSPC_841 2 0.000
#> HSPC_847 2 0.000
#> HSPC_805 2 0.000
#> HSPC_812 1 0.249
#> HSPC_818 1 1.000
#> HSPC_824 1 1.000
#> HSPC_830 2 0.751
#> HSPC_836 2 0.000
#> HSPC_842 2 0.249
#> HSPC_848 2 0.000
#> HSPC_806 2 0.498
#> HSPC_813 1 0.747
#> HSPC_819 1 0.498
#> HSPC_825 2 0.000
#> HSPC_831 1 1.000
#> HSPC_837 1 0.000
#> HSPC_843 1 0.747
#> HSPC_849 2 0.000
#> HSPC_807 1 1.000
#> HSPC_814 1 0.000
#> HSPC_820 1 1.000
#> HSPC_826 2 0.000
#> HSPC_832 1 0.751
#> HSPC_838 1 1.000
#> HSPC_844 2 0.000
#> HSPC_850 2 0.000
#> HSPC_808 1 0.747
#> HSPC_815 1 0.751
#> HSPC_821 2 0.000
#> HSPC_827 2 0.249
#> HSPC_833 1 0.502
#> HSPC_839 1 0.000
#> HSPC_845 1 1.000
#> HSPC_851 2 0.000
#> HSPC_809 2 0.747
#> HSPC_816 1 1.000
#> HSPC_822 2 0.000
#> HSPC_828 1 1.000
#> HSPC_834 1 0.751
#> HSPC_840 2 0.502
#> HSPC_846 2 0.249
#> HSPC_852 2 0.000
#> HSPC_810 2 0.747
#> Prog_811 1 0.000
#> Prog_817 1 1.000
#> Prog_823 1 1.000
#> Prog_829 1 0.249
#> Prog_835 1 0.000
#> Prog_841 1 0.000
#> Prog_847 1 0.249
#> Prog_805 2 0.253
#> Prog_812 2 1.000
#> Prog_818 1 0.000
#> Prog_824 1 0.502
#> Prog_830 1 0.000
#> Prog_836 1 0.000
#> Prog_842 1 0.000
#> Prog_848 2 0.502
#> Prog_806 1 0.253
#> Prog_813 1 0.000
#> Prog_819 1 0.000
#> Prog_825 1 0.000
#> Prog_831 1 0.000
#> Prog_837 1 0.000
#> Prog_843 1 1.000
#> Prog_849 2 0.000
#> Prog_807 1 0.000
#> Prog_814 1 0.000
#> Prog_820 1 1.000
#> Prog_826 1 0.000
#> Prog_832 1 0.000
#> Prog_838 1 0.000
#> Prog_844 1 0.000
#> Prog_850 1 0.000
#> Prog_808 1 1.000
#> Prog_815 1 0.000
#> Prog_821 1 0.000
#> Prog_827 1 0.249
#> Prog_833 1 1.000
#> Prog_839 1 0.000
#> Prog_845 1 0.000
#> Prog_851 1 0.249
#> Prog_809 1 0.502
#> Prog_816 1 0.000
#> Prog_822 1 0.000
#> Prog_828 1 0.000
#> Prog_834 1 1.000
#> Prog_840 1 1.000
#> Prog_846 1 0.751
#> Prog_852 1 0.000
#> Prog_810 1 0.747
get_classes(res, k = 3)
#> class p
#> HSPC_007 2 0.000
#> HSPC_013 2 0.249
#> HSPC_019 2 0.000
#> HSPC_025 3 0.000
#> HSPC_031 3 0.000
#> HSPC_037 3 0.000
#> LT-HSC_001 2 0.000
#> HSPC_001 1 1.000
#> HSPC_008 2 1.000
#> HSPC_014 2 1.000
#> HSPC_020 3 0.000
#> HSPC_026 3 0.000
#> HSPC_032 2 0.000
#> HSPC_038 2 1.000
#> LT-HSC_002 3 0.000
#> HSPC_002 2 0.249
#> HSPC_009 2 0.747
#> HSPC_015 2 0.000
#> HSPC_021 2 1.000
#> HSPC_027 3 0.000
#> HSPC_033 3 0.000
#> HSPC_039 2 0.000
#> LT-HSC_003 2 0.000
#> HSPC_003 1 0.253
#> HSPC_010 2 0.000
#> HSPC_016 1 1.000
#> HSPC_022 3 1.000
#> HSPC_028 3 0.000
#> HSPC_034 1 0.000
#> HSPC_040 3 0.000
#> LT-HSC_004 2 1.000
#> HSPC_004 3 0.000
#> HSPC_011 3 0.000
#> HSPC_017 2 1.000
#> HSPC_023 3 0.000
#> HSPC_029 2 0.000
#> HSPC_035 2 1.000
#> HSPC_041 3 0.000
#> LT-HSC_005 2 0.000
#> HSPC_005 2 0.000
#> HSPC_012 3 0.751
#> HSPC_018 3 0.000
#> HSPC_024 2 1.000
#> HSPC_030 3 0.000
#> HSPC_036 1 0.000
#> HSPC_042 3 0.000
#> LT-HSC_006 2 1.000
#> HSPC_006 3 1.000
#> Prog_007 1 0.000
#> Prog_013 1 1.000
#> Prog_019 1 0.000
#> Prog_025 3 1.000
#> Prog_031 3 0.000
#> Prog_037 3 0.751
#> LT-HSC_007 3 0.751
#> Prog_001 3 1.000
#> Prog_008 1 0.000
#> Prog_014 1 0.000
#> Prog_020 1 0.000
#> Prog_026 3 0.000
#> Prog_032 1 0.000
#> Prog_038 1 0.000
#> LT-HSC_008 3 0.000
#> Prog_002 1 0.000
#> Prog_009 1 0.000
#> Prog_015 1 0.498
#> Prog_021 1 0.000
#> Prog_027 1 0.502
#> Prog_033 1 0.000
#> Prog_039 1 0.000
#> LT-HSC_009 2 1.000
#> Prog_003 1 0.000
#> Prog_010 3 0.498
#> Prog_016 3 1.000
#> Prog_022 3 1.000
#> Prog_028 1 0.000
#> Prog_034 2 0.000
#> Prog_040 3 0.249
#> LT-HSC_010 3 1.000
#> Prog_004 3 0.000
#> Prog_011 1 0.000
#> Prog_017 1 0.000
#> Prog_023 1 0.000
#> Prog_029 1 0.000
#> Prog_035 1 0.000
#> Prog_041 2 0.000
#> LT-HSC_011 2 0.000
#> Prog_005 2 0.000
#> Prog_012 2 0.747
#> Prog_018 2 0.000
#> Prog_024 1 0.000
#> Prog_030 3 1.000
#> Prog_036 3 1.000
#> Prog_042 1 0.000
#> LT-HSC_012 3 1.000
#> Prog_006 1 0.000
#> HSPC_049 3 0.000
#> HSPC_055 3 0.751
#> HSPC_061 3 0.000
#> HSPC_067 3 0.000
#> HSPC_073 2 1.000
#> HSPC_079 3 1.000
#> LT-HSC_013 2 1.000
#> HSPC_043 3 0.249
#> HSPC_050 3 1.000
#> HSPC_056 2 0.249
#> HSPC_062 3 1.000
#> HSPC_068 2 0.747
#> HSPC_074 2 1.000
#> HSPC_080 3 0.000
#> LT-HSC_014 2 1.000
#> HSPC_044 3 1.000
#> HSPC_051 3 0.000
#> HSPC_057 2 1.000
#> HSPC_063 3 1.000
#> HSPC_069 3 0.000
#> HSPC_075 2 1.000
#> HSPC_081 1 1.000
#> LT-HSC_015 2 1.000
#> HSPC_045 3 0.000
#> HSPC_052 2 0.249
#> HSPC_058 3 0.000
#> HSPC_064 3 1.000
#> HSPC_070 3 0.000
#> HSPC_076 3 0.000
#> HSPC_082 3 0.000
#> LT-HSC_016 2 1.000
#> HSPC_046 3 0.000
#> HSPC_053 1 1.000
#> HSPC_059 2 0.000
#> HSPC_065 1 0.000
#> HSPC_071 1 0.000
#> HSPC_077 1 0.000
#> HSPC_083 2 1.000
#> LT-HSC_017 2 1.000
#> HSPC_047 2 0.000
#> HSPC_054 3 0.000
#> HSPC_060 3 0.000
#> HSPC_066 3 0.000
#> HSPC_072 1 0.000
#> HSPC_078 3 0.253
#> HSPC_084 3 0.000
#> LT-HSC_018 2 1.000
#> HSPC_048 3 0.000
#> Prog_049 1 0.000
#> Prog_055 1 0.000
#> Prog_061 1 0.000
#> Prog_067 1 0.000
#> Prog_073 3 0.000
#> Prog_079 1 0.000
#> LT-HSC_019 2 0.000
#> Prog_043 1 0.751
#> Prog_050 1 0.000
#> Prog_056 1 0.000
#> Prog_062 3 0.000
#> Prog_068 3 0.000
#> Prog_074 3 1.000
#> Prog_080 3 1.000
#> LT-HSC_020 3 0.000
#> Prog_044 3 0.000
#> Prog_051 1 0.000
#> Prog_057 1 0.000
#> Prog_063 3 1.000
#> Prog_069 1 1.000
#> Prog_075 1 0.000
#> Prog_081 1 0.000
#> LT-HSC_021 3 1.000
#> Prog_045 1 1.000
#> Prog_052 3 1.000
#> Prog_058 1 0.000
#> Prog_064 1 0.000
#> Prog_070 3 0.000
#> Prog_076 1 0.000
#> Prog_082 1 0.000
#> LT-HSC_022 2 1.000
#> Prog_046 1 0.000
#> Prog_053 1 0.000
#> Prog_059 1 0.253
#> Prog_065 1 0.000
#> Prog_071 1 0.000
#> Prog_077 1 0.253
#> Prog_083 1 0.000
#> LT-HSC_023 2 1.000
#> Prog_047 1 0.000
#> Prog_054 3 1.000
#> Prog_060 2 0.000
#> Prog_066 1 0.253
#> Prog_072 3 0.000
#> Prog_078 1 0.000
#> Prog_084 1 0.000
#> LT-HSC_024 3 0.000
#> Prog_048 3 0.000
#> HSPC_091 2 0.000
#> HSPC_097 2 0.502
#> HSPC_103 2 0.502
#> HSPC_109 3 1.000
#> HSPC_115 2 0.751
#> HSPC_121 2 0.751
#> LT-HSC_025 2 0.000
#> HSPC_085 3 0.000
#> HSPC_092 2 0.000
#> HSPC_098 3 1.000
#> HSPC_104 2 0.502
#> HSPC_110 2 0.000
#> HSPC_116 2 0.000
#> HSPC_122 3 0.000
#> LT-HSC_026 2 0.502
#> HSPC_086 2 0.000
#> HSPC_093 2 0.000
#> HSPC_099 3 0.000
#> HSPC_105 2 1.000
#> HSPC_111 2 1.000
#> HSPC_117 2 0.249
#> HSPC_123 2 0.502
#> LT-HSC_027 2 0.000
#> HSPC_087 2 1.000
#> HSPC_094 1 0.000
#> HSPC_100 3 0.000
#> HSPC_106 2 1.000
#> HSPC_112 2 0.000
#> HSPC_118 3 0.000
#> HSPC_124 2 0.000
#> LT-HSC_028 3 0.000
#> HSPC_088 3 0.000
#> HSPC_095 2 1.000
#> HSPC_101 1 0.000
#> HSPC_107 3 0.000
#> HSPC_113 2 0.000
#> HSPC_119 2 1.000
#> HSPC_125 3 0.000
#> LT-HSC_029 2 0.000
#> HSPC_089 1 1.000
#> HSPC_096 3 1.000
#> HSPC_102 1 0.000
#> HSPC_108 3 0.000
#> HSPC_114 3 0.000
#> HSPC_120 3 0.000
#> HSPC_126 3 0.000
#> LT-HSC_030 2 0.000
#> HSPC_090 1 1.000
#> Prog_091 1 0.000
#> Prog_097 1 0.000
#> Prog_103 1 1.000
#> Prog_109 3 1.000
#> Prog_115 1 0.000
#> Prog_121 2 0.000
#> LT-HSC_031 3 0.000
#> Prog_085 1 0.000
#> Prog_092 1 1.000
#> Prog_098 1 0.000
#> Prog_104 2 0.000
#> Prog_110 1 0.000
#> Prog_116 1 1.000
#> Prog_122 3 0.000
#> LT-HSC_032 1 0.000
#> Prog_086 2 0.000
#> Prog_093 1 0.249
#> Prog_099 1 1.000
#> Prog_105 1 0.000
#> Prog_111 1 0.000
#> Prog_117 1 0.751
#> Prog_123 1 0.000
#> LT-HSC_033 3 0.000
#> Prog_087 1 0.000
#> Prog_094 1 0.000
#> Prog_100 1 0.000
#> Prog_106 3 0.000
#> Prog_112 1 0.000
#> Prog_118 3 0.498
#> Prog_124 3 1.000
#> LT-HSC_034 3 0.000
#> Prog_088 2 0.000
#> Prog_095 1 0.000
#> Prog_101 1 0.000
#> Prog_107 1 0.000
#> Prog_113 1 0.000
#> Prog_119 1 0.000
#> Prog_125 3 0.000
#> LT-HSC_035 2 0.000
#> Prog_089 1 0.000
#> Prog_096 3 1.000
#> Prog_102 3 0.000
#> Prog_108 3 1.000
#> Prog_114 3 1.000
#> Prog_120 2 0.000
#> Prog_126 1 0.000
#> LT-HSC_036 3 0.000
#> Prog_090 1 0.000
#> HSPC_133 2 0.000
#> HSPC_139 2 1.000
#> HSPC_145 2 0.000
#> HSPC_151 2 1.000
#> HSPC_157 2 0.000
#> HSPC_163 2 0.000
#> LT-HSC_037 2 0.000
#> HSPC_127 3 0.000
#> HSPC_134 2 0.000
#> HSPC_140 2 0.000
#> HSPC_146 3 1.000
#> HSPC_152 2 0.747
#> HSPC_158 3 0.000
#> HSPC_164 2 1.000
#> LT-HSC_038 2 0.498
#> HSPC_128 2 1.000
#> HSPC_135 3 0.000
#> HSPC_141 2 0.498
#> HSPC_147 2 0.000
#> HSPC_153 2 1.000
#> HSPC_159 3 0.000
#> HSPC_165 3 1.000
#> LT-HSC_039 2 0.000
#> HSPC_129 2 0.000
#> HSPC_136 3 0.000
#> HSPC_142 3 0.000
#> HSPC_148 2 0.000
#> HSPC_154 2 0.000
#> HSPC_160 2 0.000
#> HSPC_166 3 0.751
#> LT-HSC_040 2 0.000
#> HSPC_130 2 1.000
#> HSPC_137 2 0.000
#> HSPC_143 2 0.000
#> HSPC_149 2 1.000
#> HSPC_155 2 0.249
#> HSPC_161 2 1.000
#> HSPC_167 2 0.000
#> LT-HSC_041 2 0.747
#> HSPC_131 2 0.000
#> HSPC_138 1 1.000
#> HSPC_144 3 0.000
#> HSPC_150 2 0.000
#> HSPC_156 1 1.000
#> HSPC_162 3 0.751
#> HSPC_168 3 1.000
#> LT-HSC_042 2 1.000
#> HSPC_132 1 1.000
#> Prog_133 1 0.000
#> Prog_139 1 0.000
#> Prog_145 1 0.000
#> Prog_151 3 0.000
#> Prog_157 1 1.000
#> Prog_163 1 0.000
#> LT-HSC_043 1 1.000
#> Prog_127 1 1.000
#> Prog_134 2 0.000
#> Prog_140 1 0.000
#> Prog_146 1 0.000
#> Prog_152 3 1.000
#> Prog_158 1 0.000
#> Prog_164 2 0.000
#> LT-HSC_044 2 0.000
#> Prog_128 1 0.000
#> Prog_135 3 0.000
#> Prog_141 1 0.000
#> Prog_147 2 0.000
#> Prog_153 1 1.000
#> Prog_159 3 1.000
#> Prog_165 3 1.000
#> LT-HSC_045 3 1.000
#> Prog_129 1 0.000
#> Prog_136 1 0.000
#> Prog_142 3 0.000
#> Prog_148 2 1.000
#> Prog_154 3 0.000
#> Prog_160 2 1.000
#> Prog_166 1 0.000
#> LT-HSC_046 3 0.000
#> Prog_130 1 0.000
#> Prog_137 1 1.000
#> Prog_143 1 0.000
#> Prog_149 3 1.000
#> Prog_155 1 0.249
#> Prog_161 3 0.000
#> Prog_167 1 0.000
#> LT-HSC_047 2 0.000
#> Prog_131 3 0.000
#> Prog_138 2 0.000
#> Prog_144 3 0.000
#> Prog_150 1 0.000
#> Prog_156 2 0.000
#> Prog_162 3 1.000
#> Prog_168 1 0.000
#> LT-HSC_048 2 0.000
#> Prog_132 1 0.000
#> HSPC_175 3 0.502
#> HSPC_181 2 0.498
#> HSPC_187 2 0.000
#> HSPC_193 3 1.000
#> HSPC_199 3 0.000
#> HSPC_205 2 0.249
#> LT-HSC_049 2 0.751
#> HSPC_169 3 0.000
#> HSPC_176 2 1.000
#> HSPC_182 2 0.000
#> HSPC_188 2 0.000
#> HSPC_194 2 0.000
#> HSPC_200 2 1.000
#> HSPC_206 1 1.000
#> LT-HSC_050 2 0.751
#> HSPC_170 2 1.000
#> HSPC_177 2 1.000
#> HSPC_183 3 0.000
#> HSPC_189 3 0.000
#> HSPC_195 1 0.000
#> HSPC_201 2 0.000
#> HSPC_207 3 0.000
#> LT-HSC_051 2 0.502
#> HSPC_171 2 1.000
#> HSPC_178 3 0.000
#> HSPC_184 2 0.000
#> HSPC_190 3 1.000
#> HSPC_196 3 0.000
#> HSPC_202 3 0.000
#> HSPC_208 2 0.498
#> LT-HSC_052 1 1.000
#> HSPC_172 1 1.000
#> HSPC_179 1 1.000
#> HSPC_185 2 0.000
#> HSPC_191 2 1.000
#> HSPC_197 2 0.000
#> HSPC_203 3 0.000
#> HSPC_209 2 0.000
#> LT-HSC_053 2 0.000
#> HSPC_173 2 1.000
#> HSPC_180 3 1.000
#> HSPC_186 3 1.000
#> HSPC_192 2 1.000
#> HSPC_198 3 0.000
#> HSPC_204 3 1.000
#> HSPC_210 3 1.000
#> LT-HSC_054 2 1.000
#> HSPC_174 3 0.000
#> Prog_175 3 1.000
#> Prog_181 2 0.000
#> Prog_187 3 0.000
#> Prog_193 3 0.000
#> Prog_199 3 0.502
#> Prog_205 3 1.000
#> LT-HSC_055 1 1.000
#> Prog_169 2 0.000
#> Prog_176 1 1.000
#> Prog_182 3 1.000
#> Prog_188 1 0.000
#> Prog_194 2 0.000
#> Prog_200 3 1.000
#> Prog_206 1 1.000
#> LT-HSC_056 1 0.000
#> Prog_170 1 0.000
#> Prog_177 3 0.000
#> Prog_183 1 0.000
#> Prog_189 1 1.000
#> Prog_195 3 0.000
#> Prog_201 3 1.000
#> Prog_207 1 0.000
#> LT-HSC_057 3 0.000
#> Prog_171 3 1.000
#> Prog_178 1 0.000
#> Prog_184 1 0.000
#> Prog_190 1 0.000
#> Prog_196 1 0.000
#> Prog_202 2 0.000
#> Prog_208 3 0.000
#> LT-HSC_058 3 0.000
#> Prog_172 1 0.000
#> Prog_179 1 0.000
#> Prog_185 1 0.000
#> Prog_191 3 0.000
#> Prog_197 1 0.000
#> Prog_203 1 1.000
#> Prog_209 1 0.249
#> LT-HSC_059 2 0.000
#> Prog_173 3 1.000
#> Prog_180 3 0.000
#> Prog_186 1 0.000
#> Prog_192 1 0.502
#> Prog_198 2 0.000
#> Prog_204 2 0.000
#> Prog_210 3 0.000
#> LT-HSC_060 1 1.000
#> Prog_174 2 0.000
#> HSPC_217 2 0.000
#> HSPC_223 2 0.000
#> HSPC_229 2 1.000
#> HSPC_235 2 0.249
#> HSPC_241 2 0.000
#> HSPC_247 2 0.000
#> LT-HSC_061 2 0.000
#> HSPC_211 3 0.000
#> HSPC_218 2 1.000
#> HSPC_224 2 1.000
#> HSPC_230 3 0.751
#> HSPC_236 3 1.000
#> HSPC_242 2 0.000
#> HSPC_248 2 1.000
#> LT-HSC_062 2 1.000
#> HSPC_212 2 0.249
#> HSPC_219 3 0.000
#> HSPC_225 2 0.751
#> HSPC_231 2 0.000
#> HSPC_237 2 0.000
#> HSPC_243 3 1.000
#> HSPC_249 2 1.000
#> LT-HSC_063 1 0.498
#> HSPC_213 3 0.498
#> HSPC_220 2 0.000
#> HSPC_226 2 0.000
#> HSPC_232 2 0.000
#> HSPC_238 2 0.000
#> HSPC_244 3 0.000
#> HSPC_250 3 1.000
#> LT-HSC_064 1 0.000
#> HSPC_214 1 0.000
#> HSPC_221 3 0.000
#> HSPC_227 2 1.000
#> HSPC_233 3 0.000
#> HSPC_239 2 0.000
#> HSPC_245 2 1.000
#> HSPC_251 3 1.000
#> LT-HSC_065 3 0.000
#> HSPC_215 3 1.000
#> HSPC_222 3 0.000
#> HSPC_228 2 0.253
#> HSPC_234 2 0.000
#> HSPC_240 3 0.000
#> HSPC_246 2 1.000
#> HSPC_252 2 0.000
#> LT-HSC_066 3 0.000
#> HSPC_216 1 0.498
#> Prog_217 1 0.000
#> Prog_223 3 0.000
#> Prog_229 1 0.000
#> Prog_235 2 0.000
#> Prog_241 2 1.000
#> Prog_247 3 0.000
#> LT-HSC_067 2 0.000
#> Prog_211 1 0.253
#> Prog_218 1 1.000
#> Prog_224 1 0.000
#> Prog_230 3 1.000
#> Prog_236 1 0.249
#> Prog_242 1 0.000
#> Prog_248 3 1.000
#> LT-HSC_068 1 1.000
#> Prog_212 1 0.000
#> Prog_219 2 0.000
#> Prog_225 3 0.000
#> Prog_231 1 1.000
#> Prog_237 3 0.000
#> Prog_243 1 0.000
#> Prog_249 1 0.000
#> LT-HSC_069 3 0.000
#> Prog_213 3 0.249
#> Prog_220 2 0.000
#> Prog_226 3 0.000
#> Prog_232 1 0.751
#> Prog_238 1 0.000
#> Prog_244 3 0.000
#> Prog_250 1 0.000
#> LT-HSC_070 2 0.000
#> Prog_214 3 1.000
#> Prog_221 1 0.000
#> Prog_227 1 0.000
#> Prog_233 1 1.000
#> Prog_239 1 0.000
#> Prog_245 1 0.751
#> Prog_251 2 0.000
#> LT-HSC_071 3 0.000
#> Prog_215 1 0.000
#> Prog_222 3 0.000
#> Prog_228 1 0.000
#> Prog_234 1 0.000
#> Prog_240 1 1.000
#> Prog_246 1 1.000
#> Prog_252 3 0.000
#> LT-HSC_072 1 1.000
#> Prog_216 1 0.000
#> HSPC_259 2 0.000
#> HSPC_265 2 1.000
#> HSPC_271 3 1.000
#> HSPC_277 2 0.000
#> HSPC_283 2 0.747
#> HSPC_289 2 1.000
#> LT-HSC_073 2 0.249
#> HSPC_253 3 1.000
#> HSPC_260 2 0.000
#> HSPC_266 2 0.000
#> HSPC_272 2 0.000
#> HSPC_278 2 1.000
#> HSPC_284 2 0.000
#> HSPC_290 3 1.000
#> LT-HSC_074 2 1.000
#> HSPC_254 2 1.000
#> HSPC_261 1 1.000
#> HSPC_267 3 0.000
#> HSPC_273 2 0.000
#> HSPC_279 3 1.000
#> HSPC_285 1 0.000
#> HSPC_291 3 0.000
#> LT-HSC_075 3 0.000
#> HSPC_255 3 0.000
#> HSPC_262 2 0.000
#> HSPC_268 1 0.000
#> HSPC_274 2 1.000
#> HSPC_280 3 0.253
#> HSPC_286 3 0.000
#> HSPC_292 3 0.000
#> LT-HSC_076 3 0.000
#> HSPC_256 1 0.000
#> HSPC_263 3 1.000
#> HSPC_269 1 0.249
#> HSPC_275 1 0.000
#> HSPC_281 2 0.498
#> HSPC_287 3 1.000
#> HSPC_293 3 0.000
#> LT-HSC_077 2 1.000
#> HSPC_257 3 1.000
#> HSPC_264 2 1.000
#> HSPC_270 3 0.000
#> HSPC_276 3 0.000
#> HSPC_282 1 1.000
#> HSPC_288 1 0.000
#> HSPC_294 3 1.000
#> LT-HSC_078 2 1.000
#> HSPC_258 1 0.000
#> Prog_259 3 0.000
#> Prog_265 1 0.000
#> Prog_271 3 1.000
#> Prog_277 3 0.000
#> Prog_283 3 0.000
#> Prog_289 3 1.000
#> LT-HSC_079 2 0.000
#> Prog_253 1 1.000
#> Prog_260 1 0.000
#> Prog_266 1 1.000
#> Prog_272 1 1.000
#> Prog_278 1 0.000
#> Prog_284 1 0.000
#> Prog_290 1 0.000
#> LT-HSC_080 3 0.000
#> Prog_254 1 0.000
#> Prog_261 1 0.000
#> Prog_267 1 0.000
#> Prog_273 1 0.000
#> Prog_279 1 0.000
#> Prog_285 1 0.000
#> Prog_291 3 1.000
#> LT-HSC_081 1 1.000
#> Prog_255 1 0.000
#> Prog_262 1 0.000
#> Prog_268 1 0.000
#> Prog_274 1 0.000
#> Prog_280 3 0.000
#> Prog_286 1 0.000
#> Prog_292 1 1.000
#> LT-HSC_082 3 1.000
#> Prog_256 3 0.000
#> Prog_263 1 0.000
#> Prog_269 1 0.000
#> Prog_275 1 0.000
#> Prog_281 1 0.000
#> Prog_287 1 0.000
#> Prog_293 3 0.000
#> LT-HSC_083 2 0.000
#> Prog_257 2 0.000
#> Prog_264 2 0.249
#> Prog_270 1 0.000
#> Prog_276 1 1.000
#> Prog_282 1 0.000
#> Prog_288 1 0.000
#> Prog_294 1 1.000
#> LT-HSC_084 1 1.000
#> Prog_258 1 0.000
#> HSPC_301 2 0.000
#> HSPC_307 2 0.000
#> HSPC_313 3 1.000
#> HSPC_319 2 0.000
#> HSPC_325 2 1.000
#> HSPC_331 2 0.751
#> LT-HSC_085 2 1.000
#> HSPC_295 3 1.000
#> HSPC_302 2 0.000
#> HSPC_308 2 0.249
#> HSPC_314 3 0.000
#> HSPC_320 3 0.000
#> HSPC_326 2 1.000
#> HSPC_332 1 0.000
#> LT-HSC_086 3 0.000
#> HSPC_296 2 0.000
#> HSPC_303 1 1.000
#> HSPC_309 2 1.000
#> HSPC_315 2 0.249
#> HSPC_321 3 0.000
#> HSPC_327 1 0.000
#> HSPC_333 1 0.751
#> LT-HSC_087 2 0.000
#> HSPC_297 2 1.000
#> HSPC_304 3 0.000
#> HSPC_310 2 0.498
#> HSPC_316 2 1.000
#> HSPC_322 3 0.000
#> HSPC_328 3 0.000
#> HSPC_334 2 1.000
#> LT-HSC_088 2 0.000
#> HSPC_298 3 0.000
#> HSPC_305 3 0.249
#> HSPC_311 2 0.000
#> HSPC_317 2 1.000
#> HSPC_323 3 0.000
#> HSPC_329 3 1.000
#> HSPC_335 2 1.000
#> LT-HSC_089 2 1.000
#> HSPC_299 3 0.000
#> HSPC_306 3 0.000
#> HSPC_312 3 0.751
#> HSPC_318 2 1.000
#> HSPC_324 3 0.000
#> HSPC_330 3 0.000
#> HSPC_336 2 0.000
#> LT-HSC_090 3 0.000
#> HSPC_300 1 1.000
#> Prog_301 1 0.000
#> Prog_307 3 1.000
#> Prog_313 3 1.000
#> Prog_319 1 1.000
#> Prog_325 1 0.000
#> Prog_331 1 0.000
#> LT-HSC_091 1 0.000
#> Prog_295 3 1.000
#> Prog_302 2 0.000
#> Prog_308 1 0.000
#> Prog_314 3 0.000
#> Prog_320 1 0.751
#> Prog_326 1 0.000
#> Prog_332 1 1.000
#> LT-HSC_092 2 0.000
#> Prog_296 1 1.000
#> Prog_303 2 0.000
#> Prog_309 2 1.000
#> Prog_315 3 1.000
#> Prog_321 3 1.000
#> Prog_327 1 0.000
#> Prog_333 3 1.000
#> LT-HSC_093 3 0.000
#> Prog_297 3 1.000
#> Prog_304 1 0.000
#> Prog_310 3 1.000
#> Prog_316 3 1.000
#> Prog_322 3 0.000
#> Prog_328 3 0.000
#> Prog_334 1 0.000
#> LT-HSC_094 3 0.000
#> Prog_298 1 0.502
#> Prog_305 3 1.000
#> Prog_311 3 1.000
#> Prog_317 2 0.000
#> Prog_323 3 1.000
#> Prog_329 3 1.000
#> Prog_335 3 1.000
#> LT-HSC_095 1 0.000
#> Prog_299 1 0.000
#> Prog_306 2 0.249
#> Prog_312 1 0.000
#> Prog_318 1 0.000
#> Prog_324 1 0.000
#> Prog_330 1 1.000
#> Prog_336 1 1.000
#> LT-HSC_096 1 0.000
#> Prog_300 1 0.000
#> HSPC_343 1 0.000
#> HSPC_349 3 0.000
#> HSPC_355 2 0.000
#> HSPC_361 2 0.249
#> HSPC_367 2 0.249
#> HSPC_373 2 0.000
#> LT-HSC_097 2 0.000
#> HSPC_337 2 0.000
#> HSPC_344 3 0.502
#> HSPC_350 2 1.000
#> HSPC_356 3 0.000
#> HSPC_362 1 0.751
#> HSPC_368 3 0.000
#> HSPC_374 3 0.000
#> LT-HSC_098 1 0.000
#> HSPC_338 1 0.000
#> HSPC_345 3 1.000
#> HSPC_351 2 0.249
#> HSPC_357 2 0.000
#> HSPC_363 2 1.000
#> HSPC_369 2 0.000
#> HSPC_375 2 0.000
#> LT-HSC_099 2 0.000
#> HSPC_339 3 0.000
#> HSPC_346 1 0.000
#> HSPC_352 3 0.000
#> HSPC_358 3 0.249
#> HSPC_364 3 0.000
#> HSPC_370 1 0.000
#> HSPC_376 3 0.000
#> LT-HSC_100 1 0.000
#> HSPC_340 2 0.000
#> HSPC_347 2 0.000
#> HSPC_353 1 0.000
#> HSPC_359 3 0.000
#> HSPC_365 2 0.000
#> HSPC_371 1 0.000
#> HSPC_377 3 1.000
#> LT-HSC_101 3 1.000
#> HSPC_341 1 1.000
#> HSPC_348 3 0.000
#> HSPC_354 2 1.000
#> HSPC_360 3 0.000
#> HSPC_366 2 0.000
#> HSPC_372 3 0.000
#> HSPC_378 2 0.000
#> LT-HSC_102 1 0.000
#> HSPC_342 1 0.000
#> Prog_343 1 1.000
#> Prog_349 3 1.000
#> Prog_355 3 0.498
#> Prog_361 1 0.000
#> Prog_367 1 0.000
#> Prog_373 1 0.000
#> LT-HSC_103 1 1.000
#> Prog_337 1 0.000
#> Prog_344 2 0.000
#> Prog_350 1 0.000
#> Prog_356 1 0.000
#> Prog_362 3 0.000
#> Prog_368 1 0.000
#> Prog_374 1 0.000
#> LT-HSC_104 2 0.000
#> Prog_338 1 1.000
#> Prog_345 3 1.000
#> Prog_351 1 0.000
#> Prog_357 1 0.000
#> Prog_363 1 0.000
#> Prog_369 3 1.000
#> Prog_375 1 0.000
#> LT-HSC_105 3 1.000
#> Prog_339 1 0.000
#> Prog_346 1 0.000
#> Prog_352 1 0.000
#> Prog_358 3 0.000
#> Prog_364 1 0.253
#> Prog_370 3 1.000
#> Prog_376 1 0.000
#> LT-HSC_106 3 0.502
#> Prog_340 1 0.000
#> Prog_347 2 0.000
#> Prog_353 1 1.000
#> Prog_359 1 0.000
#> Prog_365 2 0.000
#> Prog_371 1 1.000
#> Prog_377 1 0.000
#> LT-HSC_107 2 1.000
#> Prog_341 1 0.000
#> Prog_348 2 0.000
#> Prog_354 3 0.249
#> Prog_360 1 0.000
#> Prog_366 1 0.000
#> Prog_372 1 0.000
#> Prog_378 1 1.000
#> LT-HSC_108 1 0.000
#> Prog_342 1 0.000
#> HSPC_385 2 0.000
#> HSPC_391 3 0.000
#> HSPC_397 2 0.000
#> HSPC_403 3 0.000
#> HSPC_409 2 1.000
#> HSPC_415 2 0.000
#> HSPC_421 3 1.000
#> HSPC_379 2 0.000
#> HSPC_386 3 0.000
#> HSPC_392 3 0.000
#> HSPC_398 3 0.000
#> HSPC_404 1 0.000
#> HSPC_410 1 0.000
#> HSPC_416 3 0.000
#> HSPC_422 3 0.000
#> HSPC_380 3 0.000
#> HSPC_387 3 1.000
#> HSPC_393 3 0.000
#> HSPC_399 3 0.000
#> HSPC_405 3 0.000
#> HSPC_411 1 0.000
#> HSPC_417 1 1.000
#> HSPC_423 1 1.000
#> HSPC_381 2 0.000
#> HSPC_388 1 1.000
#> HSPC_394 2 0.000
#> HSPC_400 3 1.000
#> HSPC_406 3 0.000
#> HSPC_412 1 0.000
#> HSPC_418 3 0.000
#> HSPC_424 3 0.000
#> HSPC_382 1 1.000
#> HSPC_389 1 0.000
#> HSPC_395 3 0.502
#> HSPC_401 2 0.000
#> HSPC_407 1 0.000
#> HSPC_413 3 0.000
#> HSPC_419 1 0.000
#> HSPC_425 3 1.000
#> HSPC_383 2 1.000
#> HSPC_390 3 0.000
#> HSPC_396 3 0.000
#> HSPC_402 1 1.000
#> HSPC_408 1 0.000
#> HSPC_414 2 0.000
#> HSPC_420 1 1.000
#> HSPC_426 3 0.000
#> HSPC_384 2 0.000
#> Prog_385 1 0.000
#> Prog_391 2 0.000
#> Prog_397 1 0.000
#> Prog_403 1 0.000
#> Prog_409 1 0.000
#> Prog_415 1 0.000
#> Prog_421 1 0.000
#> Prog_379 1 0.000
#> Prog_386 1 0.000
#> Prog_392 1 1.000
#> Prog_398 1 0.000
#> Prog_404 1 0.000
#> Prog_410 1 0.000
#> Prog_416 1 0.000
#> Prog_422 1 0.000
#> Prog_380 1 0.000
#> Prog_387 1 0.000
#> Prog_393 1 0.000
#> Prog_399 1 0.000
#> Prog_405 1 0.249
#> Prog_411 3 0.000
#> Prog_417 3 1.000
#> Prog_423 3 0.751
#> Prog_381 1 0.000
#> Prog_388 1 0.000
#> Prog_394 3 0.000
#> Prog_400 2 0.000
#> Prog_406 1 0.000
#> Prog_412 1 0.249
#> Prog_418 1 0.000
#> Prog_424 1 0.000
#> Prog_382 3 0.000
#> Prog_389 1 0.000
#> Prog_395 1 0.000
#> Prog_401 1 1.000
#> Prog_407 1 1.000
#> Prog_413 1 0.751
#> Prog_419 1 0.000
#> Prog_425 1 0.000
#> Prog_383 1 0.000
#> Prog_390 3 1.000
#> Prog_396 1 0.000
#> Prog_402 3 1.000
#> Prog_408 1 0.000
#> Prog_414 1 0.000
#> Prog_420 1 0.000
#> Prog_426 1 0.000
#> Prog_384 3 1.000
#> HSPC_433 2 0.000
#> HSPC_439 2 0.000
#> HSPC_445 2 0.000
#> HSPC_451 2 1.000
#> HSPC_457 2 1.000
#> HSPC_463 3 0.000
#> LT-HSC_109 2 1.000
#> HSPC_427 2 0.000
#> HSPC_434 2 0.000
#> HSPC_440 3 0.000
#> HSPC_446 2 1.000
#> HSPC_452 2 0.000
#> HSPC_458 2 0.000
#> HSPC_464 2 0.000
#> LT-HSC_110 3 0.000
#> HSPC_428 2 0.000
#> HSPC_435 3 0.000
#> HSPC_441 3 0.000
#> HSPC_447 3 0.000
#> HSPC_453 3 0.000
#> HSPC_459 3 0.000
#> HSPC_465 3 0.000
#> LT-HSC_111 2 1.000
#> HSPC_429 2 0.000
#> HSPC_436 1 1.000
#> HSPC_442 1 1.000
#> HSPC_448 3 0.000
#> HSPC_454 1 1.000
#> HSPC_460 3 0.000
#> HSPC_466 3 0.000
#> LT-HSC_112 3 0.000
#> HSPC_430 3 0.000
#> HSPC_437 2 0.000
#> HSPC_443 3 0.000
#> HSPC_449 3 0.000
#> HSPC_455 2 1.000
#> HSPC_461 3 0.000
#> HSPC_467 3 0.000
#> LT-HSC_113 3 0.000
#> HSPC_431 3 0.000
#> HSPC_438 2 0.000
#> HSPC_444 2 1.000
#> HSPC_450 2 1.000
#> HSPC_456 1 1.000
#> HSPC_462 3 0.000
#> HSPC_468 3 0.000
#> LT-HSC_114 2 1.000
#> HSPC_432 2 1.000
#> Prog_433 3 0.000
#> Prog_439 3 0.000
#> Prog_445 3 0.000
#> Prog_451 1 0.000
#> Prog_457 1 0.000
#> Prog_463 3 0.000
#> LT-HSC_115 1 1.000
#> Prog_427 2 1.000
#> Prog_434 1 0.000
#> Prog_440 3 0.249
#> Prog_446 3 0.000
#> Prog_452 2 0.000
#> Prog_458 3 1.000
#> Prog_464 3 0.000
#> LT-HSC_116 3 1.000
#> Prog_428 1 1.000
#> Prog_435 3 1.000
#> Prog_441 1 0.000
#> Prog_447 1 0.747
#> Prog_453 1 0.000
#> Prog_459 3 0.000
#> Prog_465 3 0.253
#> LT-HSC_117 3 0.000
#> Prog_429 1 0.000
#> Prog_436 1 1.000
#> Prog_442 2 0.000
#> Prog_448 3 1.000
#> Prog_454 3 0.000
#> Prog_460 3 1.000
#> Prog_466 3 1.000
#> LT-HSC_118 2 0.000
#> Prog_430 1 0.000
#> Prog_437 1 1.000
#> Prog_443 1 1.000
#> Prog_449 1 0.000
#> Prog_455 3 0.000
#> Prog_461 2 0.751
#> Prog_467 3 0.000
#> LT-HSC_119 2 0.000
#> Prog_431 3 0.000
#> Prog_438 2 1.000
#> Prog_444 1 0.000
#> Prog_450 1 0.000
#> Prog_456 1 1.000
#> Prog_462 3 0.000
#> Prog_468 3 1.000
#> LT-HSC_120 3 1.000
#> Prog_432 3 0.249
#> HSPC_475 2 1.000
#> HSPC_481 2 1.000
#> HSPC_487 2 0.000
#> HSPC_493 2 1.000
#> HSPC_499 2 1.000
#> HSPC_505 3 0.000
#> LT-HSC_121 2 0.000
#> HSPC_469 2 1.000
#> HSPC_476 2 0.000
#> HSPC_482 2 0.000
#> HSPC_488 2 1.000
#> HSPC_494 2 1.000
#> HSPC_500 2 1.000
#> HSPC_506 2 1.000
#> LT-HSC_122 3 0.000
#> HSPC_470 2 0.000
#> HSPC_477 1 1.000
#> HSPC_483 2 1.000
#> HSPC_489 3 0.000
#> HSPC_495 3 1.000
#> HSPC_501 2 0.000
#> HSPC_507 2 1.000
#> LT-HSC_123 2 1.000
#> HSPC_471 2 1.000
#> HSPC_478 2 1.000
#> HSPC_484 2 0.000
#> HSPC_490 3 0.000
#> HSPC_496 3 1.000
#> HSPC_502 3 0.000
#> HSPC_508 1 0.498
#> LT-HSC_124 3 0.000
#> HSPC_472 3 0.000
#> HSPC_479 3 0.000
#> HSPC_485 1 0.249
#> HSPC_491 3 0.000
#> HSPC_497 2 1.000
#> HSPC_503 1 1.000
#> HSPC_509 3 0.249
#> LT-HSC_125 3 0.000
#> HSPC_473 3 0.000
#> HSPC_480 3 0.000
#> HSPC_486 3 0.000
#> HSPC_492 3 0.000
#> HSPC_498 3 0.000
#> HSPC_504 2 0.751
#> HSPC_510 3 1.000
#> LT-HSC_126 3 0.000
#> HSPC_474 3 0.000
#> Prog_475 1 0.000
#> Prog_481 3 0.000
#> Prog_487 1 0.000
#> Prog_493 1 0.502
#> Prog_499 1 0.000
#> Prog_505 1 0.000
#> LT-HSC_127 2 0.000
#> Prog_469 3 0.000
#> Prog_476 1 0.000
#> Prog_482 1 1.000
#> Prog_488 1 0.000
#> Prog_494 3 0.751
#> Prog_500 1 0.000
#> Prog_506 1 0.000
#> LT-HSC_128 3 0.000
#> Prog_470 1 0.000
#> Prog_477 1 0.000
#> Prog_483 3 0.502
#> Prog_489 1 0.000
#> Prog_495 3 0.000
#> Prog_501 1 1.000
#> Prog_507 3 1.000
#> LT-HSC_129 2 0.000
#> Prog_471 1 0.000
#> Prog_478 1 0.000
#> Prog_484 1 0.000
#> Prog_490 2 1.000
#> Prog_496 3 0.000
#> Prog_502 1 0.000
#> Prog_508 1 0.000
#> LT-HSC_130 1 1.000
#> Prog_472 3 0.000
#> Prog_479 1 1.000
#> Prog_485 1 1.000
#> Prog_491 1 0.000
#> Prog_497 3 1.000
#> Prog_503 3 0.249
#> Prog_509 3 0.000
#> LT-HSC_131 3 0.000
#> Prog_473 1 0.502
#> Prog_480 2 0.000
#> Prog_486 1 0.000
#> Prog_492 3 0.000
#> Prog_498 2 0.000
#> Prog_504 1 0.000
#> Prog_510 3 0.000
#> LT-HSC_132 1 0.000
#> Prog_474 1 1.000
#> HSPC_517 2 0.000
#> HSPC_523 1 1.000
#> HSPC_529 2 0.000
#> HSPC_535 2 0.000
#> HSPC_541 2 1.000
#> HSPC_547 3 0.000
#> LT-HSC_133 2 0.000
#> HSPC_511 2 0.000
#> HSPC_518 2 1.000
#> HSPC_524 2 0.747
#> HSPC_530 2 1.000
#> HSPC_536 2 0.000
#> HSPC_542 2 0.000
#> HSPC_548 2 1.000
#> LT-HSC_134 2 0.249
#> HSPC_512 3 0.000
#> HSPC_519 2 0.000
#> HSPC_525 2 0.253
#> HSPC_531 2 1.000
#> HSPC_537 2 1.000
#> HSPC_543 3 0.000
#> HSPC_549 2 1.000
#> LT-HSC_135 2 1.000
#> HSPC_513 2 0.000
#> HSPC_520 3 0.000
#> HSPC_526 3 0.000
#> HSPC_532 3 0.253
#> HSPC_538 3 0.000
#> HSPC_544 1 0.000
#> HSPC_550 3 0.000
#> LT-HSC_136 2 1.000
#> HSPC_514 3 0.000
#> HSPC_521 2 1.000
#> HSPC_527 1 1.000
#> HSPC_533 3 0.000
#> HSPC_539 2 1.000
#> HSPC_545 2 1.000
#> HSPC_551 3 0.000
#> LT-HSC_137 2 1.000
#> HSPC_515 3 0.000
#> HSPC_522 2 0.000
#> HSPC_528 1 0.000
#> HSPC_534 3 0.000
#> HSPC_540 3 0.000
#> HSPC_546 2 1.000
#> HSPC_552 3 0.000
#> LT-HSC_138 2 1.000
#> HSPC_516 3 0.000
#> Prog_517 3 0.253
#> Prog_523 1 0.000
#> Prog_529 1 0.000
#> Prog_535 1 1.000
#> Prog_541 1 0.000
#> Prog_547 1 0.000
#> LT-HSC_139 3 0.000
#> Prog_511 3 0.000
#> Prog_518 1 0.000
#> Prog_524 3 0.000
#> Prog_530 1 0.000
#> Prog_536 1 0.000
#> Prog_542 3 1.000
#> Prog_548 1 1.000
#> LT-HSC_140 2 1.000
#> Prog_512 3 1.000
#> Prog_519 3 0.000
#> Prog_525 3 0.000
#> Prog_531 1 0.000
#> Prog_537 2 1.000
#> Prog_543 1 0.000
#> Prog_549 3 1.000
#> LT-HSC_141 2 0.000
#> Prog_513 3 0.000
#> Prog_520 1 0.000
#> Prog_526 2 0.000
#> Prog_532 2 1.000
#> Prog_538 2 0.000
#> Prog_544 2 0.000
#> Prog_550 1 1.000
#> LT-HSC_142 1 0.000
#> Prog_514 1 0.253
#> Prog_521 1 0.747
#> Prog_527 1 0.000
#> Prog_533 2 1.000
#> Prog_539 3 1.000
#> Prog_545 1 0.000
#> Prog_551 1 0.000
#> LT-HSC_143 1 1.000
#> Prog_515 3 0.000
#> Prog_522 2 0.747
#> Prog_528 1 0.000
#> Prog_534 3 1.000
#> Prog_540 2 0.498
#> Prog_546 2 0.000
#> Prog_552 3 1.000
#> LT-HSC_144 3 0.000
#> Prog_516 1 0.000
#> HSPC_559 2 1.000
#> HSPC_565 2 1.000
#> HSPC_571 3 0.000
#> HSPC_577 2 1.000
#> HSPC_583 2 0.000
#> HSPC_589 2 1.000
#> LT-HSC_145 2 1.000
#> HSPC_553 1 1.000
#> HSPC_560 2 1.000
#> HSPC_566 2 1.000
#> HSPC_572 2 1.000
#> HSPC_578 2 1.000
#> HSPC_584 2 1.000
#> HSPC_590 3 0.000
#> LT-HSC_146 3 0.000
#> HSPC_554 2 1.000
#> HSPC_561 2 0.000
#> HSPC_567 3 0.000
#> HSPC_573 2 1.000
#> HSPC_579 3 0.000
#> HSPC_585 2 1.000
#> HSPC_591 2 0.751
#> LT-HSC_147 2 1.000
#> HSPC_555 2 1.000
#> HSPC_562 2 0.502
#> HSPC_568 2 1.000
#> HSPC_574 1 0.000
#> HSPC_580 3 0.000
#> HSPC_586 3 0.000
#> HSPC_592 3 0.000
#> LT-HSC_148 3 0.000
#> HSPC_556 3 0.000
#> HSPC_563 3 0.000
#> HSPC_569 1 0.000
#> HSPC_575 3 0.000
#> HSPC_581 2 0.000
#> HSPC_587 2 0.000
#> HSPC_593 2 0.000
#> LT-HSC_149 2 0.498
#> HSPC_557 3 0.000
#> HSPC_564 2 0.000
#> HSPC_570 2 0.000
#> HSPC_576 2 1.000
#> HSPC_582 2 1.000
#> HSPC_588 2 0.000
#> HSPC_594 2 1.000
#> LT-HSC_150 2 1.000
#> HSPC_558 2 0.000
#> Prog_559 1 0.249
#> Prog_565 1 1.000
#> Prog_571 1 0.747
#> Prog_577 1 0.000
#> Prog_583 2 0.000
#> Prog_589 2 0.498
#> LT-HSC_151 3 0.000
#> Prog_553 3 1.000
#> Prog_560 1 0.000
#> Prog_566 1 0.000
#> Prog_572 3 0.000
#> Prog_578 3 1.000
#> Prog_584 1 0.000
#> Prog_590 1 1.000
#> LT-HSC_152 2 1.000
#> Prog_554 3 0.000
#> Prog_561 3 0.000
#> Prog_567 1 0.000
#> Prog_573 2 0.000
#> Prog_579 1 0.000
#> Prog_585 3 0.000
#> Prog_591 2 1.000
#> LT-HSC_153 2 0.502
#> Prog_555 3 0.000
#> Prog_562 1 0.000
#> Prog_568 1 0.000
#> Prog_574 1 0.000
#> Prog_580 3 0.000
#> Prog_586 3 1.000
#> Prog_592 1 0.000
#> LT-HSC_154 2 0.000
#> Prog_556 3 0.000
#> Prog_563 2 0.000
#> Prog_569 1 0.000
#> Prog_575 1 0.000
#> Prog_581 1 1.000
#> Prog_587 1 1.000
#> Prog_593 1 1.000
#> LT-HSC_155 2 0.000
#> Prog_557 1 1.000
#> Prog_564 3 0.000
#> Prog_570 1 0.000
#> Prog_576 1 0.000
#> Prog_582 1 0.000
#> Prog_588 3 0.000
#> Prog_594 3 0.000
#> LT-HSC_156 1 1.000
#> Prog_558 3 0.000
#> HSPC_601 3 0.000
#> HSPC_607 2 1.000
#> HSPC_613 3 0.000
#> HSPC_619 2 0.000
#> HSPC_625 2 1.000
#> HSPC_631 3 0.000
#> LT-HSC_157 2 1.000
#> HSPC_595 3 0.000
#> HSPC_602 2 1.000
#> HSPC_608 2 1.000
#> HSPC_614 3 0.000
#> HSPC_620 2 1.000
#> HSPC_626 2 1.000
#> HSPC_632 2 0.000
#> LT-HSC_158 2 1.000
#> HSPC_596 3 0.000
#> HSPC_603 3 0.000
#> HSPC_609 2 0.502
#> HSPC_615 2 1.000
#> HSPC_621 2 0.000
#> HSPC_627 3 0.000
#> HSPC_633 2 0.498
#> LT-HSC_159 3 1.000
#> HSPC_597 3 0.000
#> HSPC_604 2 1.000
#> HSPC_610 2 1.000
#> HSPC_616 2 0.000
#> HSPC_622 2 0.000
#> HSPC_628 3 0.000
#> HSPC_634 3 0.000
#> LT-HSC_160 2 1.000
#> HSPC_598 3 0.000
#> HSPC_605 2 0.000
#> HSPC_611 2 0.000
#> HSPC_617 3 0.000
#> HSPC_623 3 1.000
#> HSPC_629 3 0.000
#> HSPC_635 3 0.000
#> LT-HSC_161 2 1.000
#> HSPC_599 2 1.000
#> HSPC_606 3 0.000
#> HSPC_612 3 0.000
#> HSPC_618 2 1.000
#> HSPC_624 3 0.000
#> HSPC_630 2 0.249
#> HSPC_636 3 0.000
#> LT-HSC_162 2 0.747
#> HSPC_600 2 1.000
#> Prog_601 2 0.000
#> Prog_607 1 0.253
#> Prog_613 3 0.000
#> Prog_619 2 1.000
#> Prog_625 3 1.000
#> Prog_631 3 0.000
#> LT-HSC_163 2 1.000
#> Prog_595 2 1.000
#> Prog_602 1 1.000
#> Prog_608 1 0.000
#> Prog_614 1 1.000
#> Prog_620 3 0.253
#> Prog_626 1 0.000
#> Prog_632 1 1.000
#> LT-HSC_164 3 0.000
#> Prog_596 3 0.751
#> Prog_603 1 0.000
#> Prog_609 1 1.000
#> Prog_615 1 0.000
#> Prog_621 1 0.000
#> Prog_627 3 0.000
#> Prog_633 2 0.000
#> LT-HSC_165 2 1.000
#> Prog_597 3 0.000
#> Prog_604 3 0.000
#> Prog_610 3 0.000
#> Prog_616 1 0.000
#> Prog_622 1 0.000
#> Prog_628 1 0.000
#> Prog_634 3 1.000
#> LT-HSC_166 3 0.000
#> Prog_598 1 0.000
#> Prog_605 1 0.000
#> Prog_611 3 0.000
#> Prog_617 3 0.000
#> Prog_623 1 1.000
#> Prog_629 1 1.000
#> Prog_635 3 0.000
#> LT-HSC_167 2 1.000
#> Prog_599 1 1.000
#> Prog_606 3 0.000
#> Prog_612 1 1.000
#> Prog_618 1 1.000
#> Prog_624 1 1.000
#> Prog_630 1 0.000
#> Prog_636 2 0.000
#> LT-HSC_168 1 0.000
#> Prog_600 1 1.000
#> HSPC_643 2 1.000
#> HSPC_649 3 0.000
#> HSPC_655 2 0.000
#> HSPC_661 3 0.000
#> HSPC_667 2 1.000
#> HSPC_673 2 1.000
#> LT-HSC_169 2 0.751
#> HSPC_637 3 0.000
#> HSPC_644 1 1.000
#> HSPC_650 2 0.000
#> HSPC_656 2 1.000
#> HSPC_662 2 1.000
#> HSPC_668 1 1.000
#> HSPC_674 3 0.000
#> LT-HSC_170 3 0.000
#> HSPC_638 1 1.000
#> HSPC_645 3 0.000
#> HSPC_651 3 1.000
#> HSPC_657 2 0.249
#> HSPC_663 3 0.000
#> HSPC_669 2 1.000
#> HSPC_675 2 0.000
#> LT-HSC_171 3 0.000
#> HSPC_639 3 0.000
#> HSPC_646 3 0.000
#> HSPC_652 3 0.000
#> HSPC_658 3 1.000
#> HSPC_664 3 0.000
#> HSPC_670 2 0.000
#> HSPC_676 2 1.000
#> LT-HSC_172 2 1.000
#> HSPC_640 3 0.000
#> HSPC_647 2 0.751
#> HSPC_653 2 0.000
#> HSPC_659 2 0.000
#> HSPC_665 3 0.000
#> HSPC_671 3 0.000
#> HSPC_677 2 0.000
#> LT-HSC_173 2 1.000
#> HSPC_641 3 0.000
#> HSPC_648 2 1.000
#> HSPC_654 3 0.000
#> HSPC_660 3 0.502
#> HSPC_666 3 0.751
#> HSPC_672 3 0.000
#> HSPC_678 2 1.000
#> LT-HSC_174 3 0.000
#> HSPC_642 2 0.000
#> Prog_643 3 1.000
#> Prog_649 1 0.000
#> Prog_655 1 0.000
#> Prog_661 1 0.000
#> Prog_667 3 0.000
#> Prog_673 3 1.000
#> LT-HSC_175 2 0.000
#> Prog_637 1 0.000
#> Prog_644 3 0.249
#> Prog_650 1 0.000
#> Prog_656 3 1.000
#> Prog_662 1 0.249
#> Prog_668 2 0.249
#> Prog_674 3 1.000
#> LT-HSC_176 2 0.747
#> Prog_638 1 0.000
#> Prog_645 3 0.000
#> Prog_651 3 0.000
#> Prog_657 1 0.000
#> Prog_663 1 0.000
#> Prog_669 2 0.747
#> Prog_675 1 0.000
#> LT-HSC_177 2 1.000
#> Prog_639 1 0.000
#> Prog_646 1 0.000
#> Prog_652 1 0.253
#> Prog_658 1 0.000
#> Prog_664 2 0.000
#> Prog_670 1 0.000
#> Prog_676 3 0.000
#> LT-HSC_178 2 0.000
#> Prog_640 1 0.000
#> Prog_647 3 0.000
#> Prog_653 3 0.751
#> Prog_659 3 0.000
#> Prog_665 3 0.000
#> Prog_671 3 0.000
#> Prog_677 1 0.000
#> LT-HSC_179 3 0.000
#> Prog_641 2 0.000
#> Prog_648 3 0.000
#> Prog_654 1 1.000
#> Prog_660 3 0.000
#> Prog_666 3 1.000
#> Prog_672 3 0.000
#> Prog_678 3 1.000
#> LT-HSC_180 3 0.000
#> Prog_642 3 0.000
#> HSPC_685 2 0.000
#> HSPC_691 2 0.000
#> HSPC_697 3 1.000
#> HSPC_703 2 1.000
#> HSPC_709 2 0.000
#> HSPC_715 2 0.000
#> LT-HSC_181 2 0.000
#> HSPC_679 3 0.000
#> HSPC_686 2 0.000
#> HSPC_692 2 1.000
#> HSPC_698 2 0.000
#> HSPC_704 2 1.000
#> HSPC_710 2 0.000
#> HSPC_716 2 1.000
#> LT-HSC_182 2 0.000
#> HSPC_680 2 1.000
#> HSPC_687 2 1.000
#> HSPC_693 2 0.000
#> HSPC_699 2 0.498
#> HSPC_705 1 0.000
#> HSPC_711 2 0.000
#> HSPC_717 3 1.000
#> LT-HSC_183 3 0.000
#> HSPC_681 3 0.000
#> HSPC_688 2 0.000
#> HSPC_694 2 0.000
#> HSPC_700 3 1.000
#> HSPC_706 3 0.000
#> HSPC_712 2 0.000
#> HSPC_718 2 0.000
#> LT-HSC_184 3 0.000
#> HSPC_682 1 0.000
#> HSPC_689 2 1.000
#> HSPC_695 1 0.751
#> HSPC_701 3 0.000
#> HSPC_707 3 1.000
#> HSPC_713 2 0.000
#> HSPC_719 2 1.000
#> LT-HSC_185 2 0.249
#> HSPC_683 3 0.000
#> HSPC_690 2 0.000
#> HSPC_696 3 0.253
#> HSPC_702 2 1.000
#> HSPC_708 3 0.000
#> HSPC_714 2 1.000
#> HSPC_720 1 0.000
#> LT-HSC_186 2 0.000
#> HSPC_684 2 1.000
#> Prog_685 1 0.000
#> Prog_691 2 0.000
#> Prog_697 1 0.000
#> Prog_703 2 1.000
#> Prog_709 1 0.000
#> Prog_715 1 0.000
#> LT-HSC_187 3 0.000
#> Prog_679 1 0.000
#> Prog_686 3 1.000
#> Prog_692 3 0.000
#> Prog_698 1 0.000
#> Prog_704 3 0.000
#> Prog_710 3 0.000
#> Prog_716 3 0.000
#> LT-HSC_188 3 0.000
#> Prog_680 1 1.000
#> Prog_687 1 0.000
#> Prog_693 1 1.000
#> Prog_699 1 1.000
#> Prog_705 1 0.751
#> Prog_711 3 0.000
#> Prog_717 1 0.000
#> LT-HSC_189 2 0.000
#> Prog_681 1 0.000
#> Prog_688 1 0.000
#> Prog_694 3 0.000
#> Prog_700 1 0.000
#> Prog_706 1 0.000
#> Prog_712 1 1.000
#> Prog_718 1 0.000
#> LT-HSC_190 2 0.502
#> Prog_682 1 1.000
#> Prog_689 3 0.000
#> Prog_695 1 0.000
#> Prog_701 1 0.000
#> Prog_707 1 1.000
#> Prog_713 1 0.000
#> Prog_719 1 0.000
#> LT-HSC_191 3 0.000
#> Prog_683 2 0.000
#> Prog_690 3 0.000
#> Prog_696 3 1.000
#> Prog_702 1 0.000
#> Prog_708 1 0.000
#> Prog_714 1 0.000
#> Prog_720 1 0.000
#> LT-HSC_192 1 1.000
#> Prog_684 3 0.000
#> HSPC_727 2 1.000
#> HSPC_733 2 1.000
#> HSPC_739 2 0.502
#> HSPC_745 2 0.751
#> HSPC_751 2 1.000
#> HSPC_757 2 1.000
#> LT-HSC_193 2 1.000
#> HSPC_721 2 1.000
#> HSPC_728 2 0.000
#> HSPC_734 1 0.000
#> HSPC_740 2 1.000
#> HSPC_746 2 0.000
#> HSPC_752 2 0.000
#> HSPC_758 3 0.000
#> LT-HSC_194 2 1.000
#> HSPC_722 3 0.000
#> HSPC_729 3 0.000
#> HSPC_735 3 0.000
#> HSPC_741 2 0.000
#> HSPC_747 2 0.000
#> HSPC_753 3 0.000
#> HSPC_759 3 0.000
#> LT-HSC_195 3 0.000
#> HSPC_723 3 0.000
#> HSPC_730 3 0.000
#> HSPC_736 3 0.000
#> HSPC_742 3 0.000
#> HSPC_748 2 1.000
#> HSPC_754 2 0.000
#> HSPC_760 3 0.000
#> LT-HSC_196 2 0.000
#> HSPC_724 3 0.000
#> HSPC_731 3 0.000
#> HSPC_737 1 0.000
#> HSPC_743 3 0.000
#> HSPC_749 2 1.000
#> HSPC_755 3 0.000
#> HSPC_761 3 0.000
#> LT-HSC_197 2 1.000
#> HSPC_725 2 1.000
#> HSPC_732 3 0.000
#> HSPC_738 2 1.000
#> HSPC_744 3 0.000
#> HSPC_750 3 0.000
#> HSPC_756 2 1.000
#> HSPC_762 3 0.000
#> LT-HSC_198 2 1.000
#> HSPC_726 2 0.000
#> Prog_727 1 0.000
#> Prog_733 3 0.000
#> Prog_739 3 1.000
#> Prog_745 3 0.000
#> Prog_751 1 0.000
#> Prog_757 3 1.000
#> LT-HSC_199 2 0.000
#> Prog_721 1 0.000
#> Prog_728 3 0.000
#> Prog_734 1 0.000
#> Prog_740 3 0.502
#> Prog_746 3 1.000
#> Prog_752 3 0.498
#> Prog_758 3 0.000
#> LT-HSC_200 2 1.000
#> Prog_722 1 0.000
#> Prog_729 2 0.000
#> Prog_735 1 0.000
#> Prog_741 2 0.000
#> Prog_747 3 1.000
#> Prog_753 1 0.000
#> Prog_759 1 0.000
#> LT-HSC_201 2 1.000
#> Prog_723 1 0.000
#> Prog_730 1 0.000
#> Prog_736 1 1.000
#> Prog_742 2 0.000
#> Prog_748 3 1.000
#> Prog_754 1 0.000
#> Prog_760 1 1.000
#> LT-HSC_202 3 0.000
#> Prog_724 3 0.000
#> Prog_731 1 0.000
#> Prog_737 3 0.000
#> Prog_743 1 0.000
#> Prog_749 3 1.000
#> Prog_755 2 0.000
#> Prog_761 3 1.000
#> LT-HSC_203 2 0.000
#> Prog_725 3 0.000
#> Prog_732 2 0.498
#> Prog_738 3 0.747
#> Prog_744 3 1.000
#> Prog_750 1 1.000
#> Prog_756 3 1.000
#> Prog_762 3 0.000
#> LT-HSC_204 3 1.000
#> Prog_726 3 0.000
#> HSPC_769 2 0.000
#> HSPC_775 2 0.000
#> HSPC_781 2 1.000
#> HSPC_787 2 1.000
#> HSPC_793 2 0.000
#> HSPC_799 2 1.000
#> LT-HSC_205 2 1.000
#> HSPC_763 2 0.000
#> HSPC_770 3 0.747
#> HSPC_776 2 1.000
#> HSPC_782 2 1.000
#> HSPC_788 2 1.000
#> HSPC_794 3 0.000
#> HSPC_800 3 0.502
#> LT-HSC_206 2 1.000
#> HSPC_764 2 1.000
#> HSPC_771 3 0.000
#> HSPC_777 3 0.000
#> HSPC_783 2 0.498
#> HSPC_789 3 0.000
#> HSPC_795 1 1.000
#> HSPC_801 3 0.000
#> LT-HSC_207 2 0.502
#> HSPC_765 2 1.000
#> HSPC_772 3 0.000
#> HSPC_778 3 0.000
#> HSPC_784 3 0.000
#> HSPC_790 3 0.000
#> HSPC_796 1 0.000
#> HSPC_802 2 1.000
#> LT-HSC_208 2 1.000
#> HSPC_766 1 1.000
#> HSPC_773 3 0.000
#> HSPC_779 3 0.000
#> HSPC_785 3 0.000
#> HSPC_791 2 0.249
#> HSPC_797 3 0.000
#> HSPC_803 2 0.751
#> LT-HSC_209 2 0.000
#> HSPC_767 1 1.000
#> HSPC_774 3 0.000
#> HSPC_780 3 0.000
#> HSPC_786 3 0.000
#> HSPC_792 2 0.000
#> HSPC_798 2 1.000
#> HSPC_804 2 0.502
#> LT-HSC_210 2 1.000
#> HSPC_768 2 1.000
#> Prog_769 1 1.000
#> Prog_775 3 1.000
#> Prog_781 1 0.000
#> Prog_787 3 1.000
#> Prog_793 1 1.000
#> Prog_799 3 0.000
#> LT-HSC_211 3 0.000
#> Prog_763 1 1.000
#> Prog_770 1 0.000
#> Prog_776 1 0.000
#> Prog_782 1 1.000
#> Prog_788 1 0.000
#> Prog_794 1 1.000
#> Prog_800 1 0.000
#> LT-HSC_212 3 0.000
#> Prog_764 1 1.000
#> Prog_771 1 0.000
#> Prog_777 1 0.000
#> Prog_783 1 0.000
#> Prog_789 1 0.000
#> Prog_795 1 0.000
#> Prog_801 1 1.000
#> LT-HSC_213 2 1.000
#> Prog_765 1 0.000
#> Prog_772 1 0.000
#> Prog_778 2 0.000
#> Prog_784 3 1.000
#> Prog_790 1 0.000
#> Prog_796 3 1.000
#> Prog_802 1 0.000
#> LT-HSC_214 3 0.000
#> Prog_766 2 0.000
#> Prog_773 2 0.000
#> Prog_779 1 0.000
#> Prog_785 3 0.000
#> Prog_791 1 0.000
#> Prog_797 3 0.000
#> Prog_803 3 0.502
#> LT-HSC_215 3 0.000
#> Prog_767 1 0.000
#> Prog_774 1 0.000
#> Prog_780 1 0.000
#> Prog_786 1 0.000
#> Prog_792 1 0.000
#> Prog_798 1 1.000
#> Prog_804 1 1.000
#> LT-HSC_216 3 1.000
#> Prog_768 1 1.000
#> HSPC_811 2 0.253
#> HSPC_817 2 0.000
#> HSPC_823 2 0.000
#> HSPC_829 2 0.000
#> HSPC_835 3 0.000
#> HSPC_841 3 1.000
#> HSPC_847 2 0.249
#> HSPC_805 2 0.000
#> HSPC_812 1 1.000
#> HSPC_818 3 0.000
#> HSPC_824 3 0.000
#> HSPC_830 2 0.000
#> HSPC_836 2 1.000
#> HSPC_842 2 1.000
#> HSPC_848 2 1.000
#> HSPC_806 2 0.502
#> HSPC_813 1 1.000
#> HSPC_819 3 0.000
#> HSPC_825 3 0.000
#> HSPC_831 3 0.000
#> HSPC_837 3 1.000
#> HSPC_843 3 0.000
#> HSPC_849 2 1.000
#> HSPC_807 1 0.000
#> HSPC_814 3 1.000
#> HSPC_820 1 1.000
#> HSPC_826 3 0.000
#> HSPC_832 3 0.000
#> HSPC_838 3 0.000
#> HSPC_844 2 1.000
#> HSPC_850 2 0.000
#> HSPC_808 1 1.000
#> HSPC_815 3 0.000
#> HSPC_821 3 0.000
#> HSPC_827 2 1.000
#> HSPC_833 1 0.000
#> HSPC_839 3 1.000
#> HSPC_845 3 0.000
#> HSPC_851 2 1.000
#> HSPC_809 2 1.000
#> HSPC_816 3 0.000
#> HSPC_822 3 0.000
#> HSPC_828 3 0.000
#> HSPC_834 3 0.000
#> HSPC_840 2 1.000
#> HSPC_846 3 0.000
#> HSPC_852 2 1.000
#> HSPC_810 2 0.751
#> Prog_811 1 0.000
#> Prog_817 1 1.000
#> Prog_823 3 0.000
#> Prog_829 1 0.000
#> Prog_835 1 0.000
#> Prog_841 1 1.000
#> Prog_847 1 0.000
#> Prog_805 2 1.000
#> Prog_812 2 0.000
#> Prog_818 1 0.000
#> Prog_824 1 0.000
#> Prog_830 1 0.000
#> Prog_836 1 0.000
#> Prog_842 1 0.000
#> Prog_848 2 1.000
#> Prog_806 3 0.000
#> Prog_813 1 0.000
#> Prog_819 1 0.000
#> Prog_825 1 0.000
#> Prog_831 1 0.000
#> Prog_837 1 0.000
#> Prog_843 1 0.253
#> Prog_849 3 0.000
#> Prog_807 1 0.000
#> Prog_814 1 0.000
#> Prog_820 1 1.000
#> Prog_826 1 0.000
#> Prog_832 1 0.000
#> Prog_838 1 0.000
#> Prog_844 1 0.000
#> Prog_850 1 0.000
#> Prog_808 1 1.000
#> Prog_815 1 0.000
#> Prog_821 1 0.000
#> Prog_827 3 0.000
#> Prog_833 1 1.000
#> Prog_839 1 0.000
#> Prog_845 1 0.000
#> Prog_851 3 1.000
#> Prog_809 1 0.253
#> Prog_816 1 0.000
#> Prog_822 1 0.000
#> Prog_828 1 0.000
#> Prog_834 1 1.000
#> Prog_840 1 1.000
#> Prog_846 1 0.000
#> Prog_852 3 1.000
#> Prog_810 1 1.000
get_classes(res, k = 4)
#> class p
#> HSPC_007 2 0.000
#> HSPC_013 2 1.000
#> HSPC_019 2 0.000
#> HSPC_025 4 0.000
#> HSPC_031 3 0.000
#> HSPC_037 4 0.747
#> LT-HSC_001 2 1.000
#> HSPC_001 1 1.000
#> HSPC_008 4 0.249
#> HSPC_014 2 0.502
#> HSPC_020 4 1.000
#> HSPC_026 4 0.000
#> HSPC_032 2 0.000
#> HSPC_038 2 0.000
#> LT-HSC_002 4 0.498
#> HSPC_002 2 1.000
#> HSPC_009 2 1.000
#> HSPC_015 2 0.000
#> HSPC_021 2 1.000
#> HSPC_027 3 0.253
#> HSPC_033 3 1.000
#> HSPC_039 2 0.000
#> LT-HSC_003 2 1.000
#> HSPC_003 1 0.751
#> HSPC_010 2 0.000
#> HSPC_016 1 1.000
#> HSPC_022 4 0.000
#> HSPC_028 3 0.751
#> HSPC_034 1 0.000
#> HSPC_040 3 0.000
#> LT-HSC_004 2 0.751
#> HSPC_004 3 0.498
#> HSPC_011 4 1.000
#> HSPC_017 2 1.000
#> HSPC_023 4 0.000
#> HSPC_029 2 0.000
#> HSPC_035 2 0.498
#> HSPC_041 4 1.000
#> LT-HSC_005 2 0.000
#> HSPC_005 2 0.000
#> HSPC_012 4 0.000
#> HSPC_018 4 0.000
#> HSPC_024 2 1.000
#> HSPC_030 3 0.000
#> HSPC_036 1 0.000
#> HSPC_042 3 0.000
#> LT-HSC_006 2 0.000
#> HSPC_006 4 0.000
#> Prog_007 1 0.000
#> Prog_013 1 1.000
#> Prog_019 1 0.000
#> Prog_025 4 0.000
#> Prog_031 3 0.000
#> Prog_037 3 0.747
#> LT-HSC_007 4 0.502
#> Prog_001 4 1.000
#> Prog_008 1 0.000
#> Prog_014 1 0.000
#> Prog_020 1 0.000
#> Prog_026 3 0.000
#> Prog_032 1 0.000
#> Prog_038 1 0.000
#> LT-HSC_008 3 1.000
#> Prog_002 1 0.000
#> Prog_009 1 0.000
#> Prog_015 1 0.249
#> Prog_021 1 0.000
#> Prog_027 1 1.000
#> Prog_033 1 0.000
#> Prog_039 1 0.000
#> LT-HSC_009 2 0.249
#> Prog_003 1 0.000
#> Prog_010 4 0.000
#> Prog_016 4 0.000
#> Prog_022 4 0.000
#> Prog_028 1 0.000
#> Prog_034 2 0.000
#> Prog_040 4 0.000
#> LT-HSC_010 4 0.000
#> Prog_004 3 0.000
#> Prog_011 1 0.000
#> Prog_017 1 0.000
#> Prog_023 1 0.000
#> Prog_029 1 0.000
#> Prog_035 1 0.000
#> Prog_041 2 0.000
#> LT-HSC_011 2 0.000
#> Prog_005 2 0.000
#> Prog_012 2 1.000
#> Prog_018 2 1.000
#> Prog_024 1 0.000
#> Prog_030 4 0.000
#> Prog_036 4 0.000
#> Prog_042 4 1.000
#> LT-HSC_012 4 0.000
#> Prog_006 1 0.000
#> HSPC_049 3 0.249
#> HSPC_055 4 0.000
#> HSPC_061 4 1.000
#> HSPC_067 4 1.000
#> HSPC_073 2 0.751
#> HSPC_079 4 0.000
#> LT-HSC_013 2 0.000
#> HSPC_043 4 0.000
#> HSPC_050 4 0.000
#> HSPC_056 2 1.000
#> HSPC_062 4 0.000
#> HSPC_068 2 1.000
#> HSPC_074 2 1.000
#> HSPC_080 3 0.000
#> LT-HSC_014 2 0.000
#> HSPC_044 4 0.000
#> HSPC_051 3 0.000
#> HSPC_057 2 0.000
#> HSPC_063 4 0.000
#> HSPC_069 3 0.502
#> HSPC_075 2 0.502
#> HSPC_081 3 0.000
#> LT-HSC_015 2 0.000
#> HSPC_045 4 0.249
#> HSPC_052 4 1.000
#> HSPC_058 3 1.000
#> HSPC_064 4 1.000
#> HSPC_070 3 0.000
#> HSPC_076 3 0.253
#> HSPC_082 4 1.000
#> LT-HSC_016 2 0.249
#> HSPC_046 3 0.000
#> HSPC_053 1 1.000
#> HSPC_059 2 0.000
#> HSPC_065 3 1.000
#> HSPC_071 4 0.502
#> HSPC_077 1 0.000
#> HSPC_083 2 1.000
#> LT-HSC_017 2 0.502
#> HSPC_047 2 0.249
#> HSPC_054 3 1.000
#> HSPC_060 3 0.000
#> HSPC_066 3 0.000
#> HSPC_072 4 1.000
#> HSPC_078 4 0.000
#> HSPC_084 4 1.000
#> LT-HSC_018 2 0.000
#> HSPC_048 3 0.000
#> Prog_049 1 0.000
#> Prog_055 1 0.000
#> Prog_061 1 0.000
#> Prog_067 1 0.000
#> Prog_073 3 0.000
#> Prog_079 1 0.000
#> LT-HSC_019 2 0.000
#> Prog_043 1 1.000
#> Prog_050 1 0.000
#> Prog_056 1 0.000
#> Prog_062 4 0.000
#> Prog_068 3 0.000
#> Prog_074 4 0.000
#> Prog_080 4 0.751
#> LT-HSC_020 3 0.000
#> Prog_044 3 0.000
#> Prog_051 1 0.000
#> Prog_057 1 0.000
#> Prog_063 4 1.000
#> Prog_069 1 1.000
#> Prog_075 1 0.000
#> Prog_081 1 0.000
#> LT-HSC_021 4 0.000
#> Prog_045 1 1.000
#> Prog_052 4 0.000
#> Prog_058 1 0.000
#> Prog_064 1 0.000
#> Prog_070 4 0.502
#> Prog_076 1 0.000
#> Prog_082 1 0.000
#> LT-HSC_022 2 1.000
#> Prog_046 1 0.000
#> Prog_053 1 0.000
#> Prog_059 1 0.000
#> Prog_065 1 0.000
#> Prog_071 1 0.000
#> Prog_077 1 0.498
#> Prog_083 1 0.000
#> LT-HSC_023 2 0.000
#> Prog_047 1 0.000
#> Prog_054 4 0.000
#> Prog_060 2 0.000
#> Prog_066 1 0.502
#> Prog_072 3 0.000
#> Prog_078 1 0.000
#> Prog_084 1 0.000
#> LT-HSC_024 3 0.000
#> Prog_048 3 0.000
#> HSPC_091 2 0.000
#> HSPC_097 2 0.249
#> HSPC_103 2 1.000
#> HSPC_109 4 0.000
#> HSPC_115 2 1.000
#> HSPC_121 2 1.000
#> LT-HSC_025 2 1.000
#> HSPC_085 4 1.000
#> HSPC_092 2 0.000
#> HSPC_098 4 0.249
#> HSPC_104 2 0.498
#> HSPC_110 4 0.000
#> HSPC_116 2 0.000
#> HSPC_122 3 1.000
#> LT-HSC_026 2 1.000
#> HSPC_086 2 0.000
#> HSPC_093 2 0.000
#> HSPC_099 4 1.000
#> HSPC_105 2 1.000
#> HSPC_111 2 0.000
#> HSPC_117 4 0.000
#> HSPC_123 2 1.000
#> LT-HSC_027 2 0.502
#> HSPC_087 2 0.253
#> HSPC_094 1 0.000
#> HSPC_100 3 0.000
#> HSPC_106 2 0.000
#> HSPC_112 2 0.000
#> HSPC_118 3 0.249
#> HSPC_124 2 0.000
#> LT-HSC_028 3 0.000
#> HSPC_088 3 0.000
#> HSPC_095 2 0.000
#> HSPC_101 1 0.000
#> HSPC_107 4 1.000
#> HSPC_113 2 1.000
#> HSPC_119 2 1.000
#> HSPC_125 3 1.000
#> LT-HSC_029 2 0.000
#> HSPC_089 3 1.000
#> HSPC_096 4 0.000
#> HSPC_102 1 0.000
#> HSPC_108 3 0.000
#> HSPC_114 3 0.000
#> HSPC_120 3 1.000
#> HSPC_126 3 0.000
#> LT-HSC_030 2 0.498
#> HSPC_090 1 1.000
#> Prog_091 1 0.000
#> Prog_097 1 0.000
#> Prog_103 1 1.000
#> Prog_109 4 0.000
#> Prog_115 1 0.000
#> Prog_121 2 0.000
#> LT-HSC_031 3 0.000
#> Prog_085 1 0.000
#> Prog_092 3 0.000
#> Prog_098 1 0.000
#> Prog_104 2 0.000
#> Prog_110 1 0.000
#> Prog_116 1 1.000
#> Prog_122 3 0.000
#> LT-HSC_032 1 0.000
#> Prog_086 2 0.000
#> Prog_093 1 0.751
#> Prog_099 1 1.000
#> Prog_105 1 0.000
#> Prog_111 1 0.000
#> Prog_117 1 0.747
#> Prog_123 1 0.000
#> LT-HSC_033 3 1.000
#> Prog_087 1 0.000
#> Prog_094 1 0.000
#> Prog_100 1 0.000
#> Prog_106 3 0.000
#> Prog_112 1 0.000
#> Prog_118 4 1.000
#> Prog_124 3 0.000
#> LT-HSC_034 3 1.000
#> Prog_088 4 0.000
#> Prog_095 1 0.000
#> Prog_101 1 0.000
#> Prog_107 1 0.000
#> Prog_113 1 0.000
#> Prog_119 1 0.000
#> Prog_125 3 1.000
#> LT-HSC_035 2 1.000
#> Prog_089 1 0.000
#> Prog_096 3 1.000
#> Prog_102 3 1.000
#> Prog_108 4 0.000
#> Prog_114 4 0.000
#> Prog_120 2 1.000
#> Prog_126 1 0.000
#> LT-HSC_036 3 0.000
#> Prog_090 1 0.000
#> HSPC_133 2 1.000
#> HSPC_139 2 1.000
#> HSPC_145 2 0.751
#> HSPC_151 4 0.000
#> HSPC_157 4 0.000
#> HSPC_163 2 0.000
#> LT-HSC_037 2 1.000
#> HSPC_127 4 0.249
#> HSPC_134 2 1.000
#> HSPC_140 2 1.000
#> HSPC_146 4 0.000
#> HSPC_152 2 1.000
#> HSPC_158 4 0.249
#> HSPC_164 2 1.000
#> LT-HSC_038 2 0.000
#> HSPC_128 2 0.000
#> HSPC_135 3 1.000
#> HSPC_141 2 1.000
#> HSPC_147 2 1.000
#> HSPC_153 2 1.000
#> HSPC_159 4 0.000
#> HSPC_165 4 0.000
#> LT-HSC_039 2 1.000
#> HSPC_129 2 0.000
#> HSPC_136 4 0.000
#> HSPC_142 4 0.747
#> HSPC_148 4 1.000
#> HSPC_154 4 0.000
#> HSPC_160 2 0.000
#> HSPC_166 4 0.000
#> LT-HSC_040 2 1.000
#> HSPC_130 4 0.000
#> HSPC_137 2 0.000
#> HSPC_143 2 1.000
#> HSPC_149 2 1.000
#> HSPC_155 2 1.000
#> HSPC_161 4 0.000
#> HSPC_167 2 1.000
#> LT-HSC_041 2 1.000
#> HSPC_131 2 1.000
#> HSPC_138 1 1.000
#> HSPC_144 3 0.000
#> HSPC_150 2 0.000
#> HSPC_156 1 1.000
#> HSPC_162 3 0.000
#> HSPC_168 4 0.000
#> LT-HSC_042 2 0.000
#> HSPC_132 1 1.000
#> Prog_133 1 0.000
#> Prog_139 1 0.000
#> Prog_145 1 0.000
#> Prog_151 3 0.000
#> Prog_157 1 0.498
#> Prog_163 1 0.000
#> LT-HSC_043 1 1.000
#> Prog_127 3 0.000
#> Prog_134 4 0.000
#> Prog_140 1 0.000
#> Prog_146 1 0.000
#> Prog_152 4 0.000
#> Prog_158 1 0.000
#> Prog_164 2 0.747
#> LT-HSC_044 4 1.000
#> Prog_128 1 0.000
#> Prog_135 3 0.000
#> Prog_141 1 0.502
#> Prog_147 2 0.000
#> Prog_153 1 1.000
#> Prog_159 4 0.000
#> Prog_165 4 0.000
#> LT-HSC_045 4 0.000
#> Prog_129 1 0.000
#> Prog_136 1 0.000
#> Prog_142 3 0.000
#> Prog_148 2 0.000
#> Prog_154 3 0.000
#> Prog_160 2 0.000
#> Prog_166 1 0.000
#> LT-HSC_046 3 0.498
#> Prog_130 1 0.000
#> Prog_137 1 1.000
#> Prog_143 1 0.000
#> Prog_149 4 1.000
#> Prog_155 1 0.000
#> Prog_161 3 0.000
#> Prog_167 1 0.502
#> LT-HSC_047 2 0.000
#> Prog_131 3 0.000
#> Prog_138 2 0.000
#> Prog_144 4 0.249
#> Prog_150 1 0.000
#> Prog_156 2 0.000
#> Prog_162 4 0.000
#> Prog_168 1 0.000
#> LT-HSC_048 2 1.000
#> Prog_132 1 0.000
#> HSPC_175 4 0.000
#> HSPC_181 2 1.000
#> HSPC_187 2 1.000
#> HSPC_193 3 0.000
#> HSPC_199 3 0.000
#> HSPC_205 2 1.000
#> LT-HSC_049 2 1.000
#> HSPC_169 4 0.000
#> HSPC_176 2 1.000
#> HSPC_182 2 0.751
#> HSPC_188 2 0.000
#> HSPC_194 2 0.000
#> HSPC_200 2 0.751
#> HSPC_206 1 1.000
#> LT-HSC_050 2 1.000
#> HSPC_170 2 0.000
#> HSPC_177 2 0.249
#> HSPC_183 3 0.000
#> HSPC_189 3 1.000
#> HSPC_195 1 0.000
#> HSPC_201 2 0.000
#> HSPC_207 3 0.000
#> LT-HSC_051 2 1.000
#> HSPC_171 2 0.000
#> HSPC_178 3 0.747
#> HSPC_184 2 0.000
#> HSPC_190 4 1.000
#> HSPC_196 4 1.000
#> HSPC_202 3 0.000
#> HSPC_208 2 1.000
#> LT-HSC_052 1 1.000
#> HSPC_172 1 1.000
#> HSPC_179 1 1.000
#> HSPC_185 2 0.751
#> HSPC_191 2 0.000
#> HSPC_197 2 0.000
#> HSPC_203 4 1.000
#> HSPC_209 2 0.000
#> LT-HSC_053 2 0.000
#> HSPC_173 2 0.000
#> HSPC_180 4 0.000
#> HSPC_186 3 0.498
#> HSPC_192 2 0.000
#> HSPC_198 3 1.000
#> HSPC_204 4 0.000
#> HSPC_210 4 0.000
#> LT-HSC_054 2 0.000
#> HSPC_174 3 0.000
#> Prog_175 4 0.000
#> Prog_181 2 0.000
#> Prog_187 3 0.000
#> Prog_193 4 1.000
#> Prog_199 3 0.249
#> Prog_205 4 1.000
#> LT-HSC_055 1 1.000
#> Prog_169 2 0.000
#> Prog_176 1 1.000
#> Prog_182 4 1.000
#> Prog_188 1 0.000
#> Prog_194 2 1.000
#> Prog_200 4 0.000
#> Prog_206 1 1.000
#> LT-HSC_056 1 0.000
#> Prog_170 1 0.000
#> Prog_177 4 1.000
#> Prog_183 1 0.000
#> Prog_189 1 1.000
#> Prog_195 4 0.751
#> Prog_201 4 0.000
#> Prog_207 1 0.000
#> LT-HSC_057 3 0.000
#> Prog_171 4 0.000
#> Prog_178 1 0.000
#> Prog_184 1 0.000
#> Prog_190 1 0.000
#> Prog_196 1 0.000
#> Prog_202 2 0.000
#> Prog_208 3 0.000
#> LT-HSC_058 3 0.000
#> Prog_172 1 0.000
#> Prog_179 1 0.000
#> Prog_185 1 0.000
#> Prog_191 3 0.000
#> Prog_197 1 0.000
#> Prog_203 1 1.000
#> Prog_209 1 1.000
#> LT-HSC_059 2 0.747
#> Prog_173 4 0.253
#> Prog_180 3 0.000
#> Prog_186 1 0.000
#> Prog_192 1 0.498
#> Prog_198 2 0.000
#> Prog_204 2 0.000
#> Prog_210 3 0.000
#> LT-HSC_060 1 1.000
#> Prog_174 2 0.000
#> HSPC_217 2 0.751
#> HSPC_223 2 1.000
#> HSPC_229 2 1.000
#> HSPC_235 2 1.000
#> HSPC_241 2 0.000
#> HSPC_247 2 1.000
#> LT-HSC_061 2 0.000
#> HSPC_211 4 0.000
#> HSPC_218 2 0.249
#> HSPC_224 2 1.000
#> HSPC_230 4 0.000
#> HSPC_236 4 0.000
#> HSPC_242 2 1.000
#> HSPC_248 2 1.000
#> LT-HSC_062 2 0.000
#> HSPC_212 2 0.751
#> HSPC_219 4 0.249
#> HSPC_225 2 1.000
#> HSPC_231 2 1.000
#> HSPC_237 2 1.000
#> HSPC_243 4 0.000
#> HSPC_249 2 0.249
#> LT-HSC_063 3 0.249
#> HSPC_213 4 0.000
#> HSPC_220 2 1.000
#> HSPC_226 2 0.000
#> HSPC_232 2 1.000
#> HSPC_238 2 0.000
#> HSPC_244 3 0.000
#> HSPC_250 4 0.000
#> LT-HSC_064 1 0.000
#> HSPC_214 1 0.000
#> HSPC_221 3 1.000
#> HSPC_227 2 1.000
#> HSPC_233 4 0.498
#> HSPC_239 2 1.000
#> HSPC_245 2 0.747
#> HSPC_251 4 0.498
#> LT-HSC_065 3 0.000
#> HSPC_215 4 0.000
#> HSPC_222 4 1.000
#> HSPC_228 2 0.253
#> HSPC_234 2 0.000
#> HSPC_240 3 0.000
#> HSPC_246 2 0.000
#> HSPC_252 2 0.000
#> LT-HSC_066 3 1.000
#> HSPC_216 1 1.000
#> Prog_217 1 0.000
#> Prog_223 4 0.000
#> Prog_229 1 0.000
#> Prog_235 2 1.000
#> Prog_241 2 1.000
#> Prog_247 3 0.751
#> LT-HSC_067 2 0.000
#> Prog_211 1 0.502
#> Prog_218 1 1.000
#> Prog_224 1 0.000
#> Prog_230 4 0.498
#> Prog_236 1 0.253
#> Prog_242 1 0.000
#> Prog_248 4 0.000
#> LT-HSC_068 1 1.000
#> Prog_212 1 0.000
#> Prog_219 2 0.000
#> Prog_225 3 0.000
#> Prog_231 1 1.000
#> Prog_237 4 0.747
#> Prog_243 1 0.000
#> Prog_249 1 0.000
#> LT-HSC_069 3 0.000
#> Prog_213 4 0.249
#> Prog_220 2 0.000
#> Prog_226 3 0.751
#> Prog_232 3 0.253
#> Prog_238 1 0.000
#> Prog_244 3 0.000
#> Prog_250 1 0.000
#> LT-HSC_070 4 0.000
#> Prog_214 4 0.751
#> Prog_221 1 0.000
#> Prog_227 1 0.000
#> Prog_233 1 1.000
#> Prog_239 1 0.000
#> Prog_245 1 1.000
#> Prog_251 2 0.000
#> LT-HSC_071 3 0.000
#> Prog_215 1 0.000
#> Prog_222 3 0.000
#> Prog_228 1 0.000
#> Prog_234 1 0.000
#> Prog_240 1 1.000
#> Prog_246 3 1.000
#> Prog_252 3 0.000
#> LT-HSC_072 1 1.000
#> Prog_216 1 0.000
#> HSPC_259 2 0.498
#> HSPC_265 2 1.000
#> HSPC_271 4 0.000
#> HSPC_277 2 0.249
#> HSPC_283 2 1.000
#> HSPC_289 2 0.502
#> LT-HSC_073 2 1.000
#> HSPC_253 4 0.000
#> HSPC_260 2 0.000
#> HSPC_266 2 1.000
#> HSPC_272 2 0.000
#> HSPC_278 4 0.000
#> HSPC_284 2 0.000
#> HSPC_290 4 1.000
#> LT-HSC_074 2 0.751
#> HSPC_254 2 1.000
#> HSPC_261 1 1.000
#> HSPC_267 3 0.000
#> HSPC_273 2 0.000
#> HSPC_279 4 0.000
#> HSPC_285 1 0.000
#> HSPC_291 3 0.000
#> LT-HSC_075 3 0.000
#> HSPC_255 3 0.000
#> HSPC_262 2 0.000
#> HSPC_268 1 0.000
#> HSPC_274 2 1.000
#> HSPC_280 4 0.000
#> HSPC_286 4 1.000
#> HSPC_292 4 1.000
#> LT-HSC_076 4 1.000
#> HSPC_256 1 0.000
#> HSPC_263 4 0.000
#> HSPC_269 1 0.000
#> HSPC_275 1 0.000
#> HSPC_281 2 1.000
#> HSPC_287 4 0.000
#> HSPC_293 4 0.000
#> LT-HSC_077 2 0.000
#> HSPC_257 4 0.000
#> HSPC_264 2 0.000
#> HSPC_270 3 1.000
#> HSPC_276 3 0.000
#> HSPC_282 1 1.000
#> HSPC_288 1 0.000
#> HSPC_294 4 0.000
#> LT-HSC_078 2 0.751
#> HSPC_258 1 0.000
#> Prog_259 3 0.000
#> Prog_265 1 0.000
#> Prog_271 3 1.000
#> Prog_277 3 1.000
#> Prog_283 4 0.751
#> Prog_289 4 0.000
#> LT-HSC_079 2 0.000
#> Prog_253 1 1.000
#> Prog_260 1 0.000
#> Prog_266 1 1.000
#> Prog_272 1 0.751
#> Prog_278 1 0.000
#> Prog_284 1 0.000
#> Prog_290 1 0.000
#> LT-HSC_080 3 0.000
#> Prog_254 1 0.000
#> Prog_261 1 0.000
#> Prog_267 1 0.000
#> Prog_273 1 0.000
#> Prog_279 1 0.000
#> Prog_285 1 0.000
#> Prog_291 4 0.000
#> LT-HSC_081 1 1.000
#> Prog_255 1 0.000
#> Prog_262 1 0.000
#> Prog_268 1 0.000
#> Prog_274 1 0.000
#> Prog_280 3 1.000
#> Prog_286 1 0.000
#> Prog_292 1 1.000
#> LT-HSC_082 3 0.000
#> Prog_256 4 1.000
#> Prog_263 1 0.000
#> Prog_269 1 0.000
#> Prog_275 1 0.000
#> Prog_281 1 0.000
#> Prog_287 1 0.000
#> Prog_293 3 0.253
#> LT-HSC_083 2 0.000
#> Prog_257 2 0.000
#> Prog_264 2 1.000
#> Prog_270 1 0.000
#> Prog_276 1 1.000
#> Prog_282 1 0.000
#> Prog_288 1 0.000
#> Prog_294 1 1.000
#> LT-HSC_084 3 0.249
#> Prog_258 1 0.000
#> HSPC_301 2 0.747
#> HSPC_307 2 1.000
#> HSPC_313 4 0.000
#> HSPC_319 2 0.249
#> HSPC_325 2 1.000
#> HSPC_331 2 1.000
#> LT-HSC_085 2 0.498
#> HSPC_295 4 1.000
#> HSPC_302 2 1.000
#> HSPC_308 4 0.000
#> HSPC_314 4 0.000
#> HSPC_320 4 0.000
#> HSPC_326 2 0.751
#> HSPC_332 1 0.249
#> LT-HSC_086 4 0.498
#> HSPC_296 2 1.000
#> HSPC_303 1 1.000
#> HSPC_309 2 1.000
#> HSPC_315 2 1.000
#> HSPC_321 4 0.000
#> HSPC_327 1 0.000
#> HSPC_333 1 0.000
#> LT-HSC_087 2 1.000
#> HSPC_297 2 0.751
#> HSPC_304 3 0.000
#> HSPC_310 2 1.000
#> HSPC_316 2 0.751
#> HSPC_322 3 0.000
#> HSPC_328 4 1.000
#> HSPC_334 2 1.000
#> LT-HSC_088 4 0.000
#> HSPC_298 3 0.000
#> HSPC_305 4 0.000
#> HSPC_311 2 1.000
#> HSPC_317 2 1.000
#> HSPC_323 3 0.000
#> HSPC_329 4 1.000
#> HSPC_335 2 0.751
#> LT-HSC_089 2 1.000
#> HSPC_299 3 0.249
#> HSPC_306 3 0.000
#> HSPC_312 4 1.000
#> HSPC_318 2 1.000
#> HSPC_324 3 1.000
#> HSPC_330 3 0.000
#> HSPC_336 2 1.000
#> LT-HSC_090 3 0.000
#> HSPC_300 1 1.000
#> Prog_301 4 1.000
#> Prog_307 4 0.498
#> Prog_313 4 0.000
#> Prog_319 1 1.000
#> Prog_325 1 0.000
#> Prog_331 1 0.000
#> LT-HSC_091 1 0.000
#> Prog_295 4 0.000
#> Prog_302 2 1.000
#> Prog_308 1 0.000
#> Prog_314 3 0.000
#> Prog_320 1 1.000
#> Prog_326 1 0.000
#> Prog_332 1 1.000
#> LT-HSC_092 2 1.000
#> Prog_296 1 1.000
#> Prog_303 2 1.000
#> Prog_309 2 1.000
#> Prog_315 4 0.000
#> Prog_321 4 0.000
#> Prog_327 1 0.000
#> Prog_333 4 0.000
#> LT-HSC_093 4 0.249
#> Prog_297 4 0.000
#> Prog_304 1 0.000
#> Prog_310 4 0.000
#> Prog_316 4 0.000
#> Prog_322 4 0.000
#> Prog_328 4 0.253
#> Prog_334 1 0.000
#> LT-HSC_094 4 1.000
#> Prog_298 1 0.747
#> Prog_305 4 0.000
#> Prog_311 4 0.000
#> Prog_317 2 0.000
#> Prog_323 4 0.000
#> Prog_329 4 0.000
#> Prog_335 4 0.000
#> LT-HSC_095 1 0.000
#> Prog_299 1 0.000
#> Prog_306 2 1.000
#> Prog_312 1 0.000
#> Prog_318 1 0.000
#> Prog_324 1 0.000
#> Prog_330 1 1.000
#> Prog_336 1 1.000
#> LT-HSC_096 1 0.000
#> Prog_300 1 0.000
#> HSPC_343 1 0.000
#> HSPC_349 3 0.000
#> HSPC_355 2 0.000
#> HSPC_361 2 0.751
#> HSPC_367 2 1.000
#> HSPC_373 2 1.000
#> LT-HSC_097 2 1.000
#> HSPC_337 2 1.000
#> HSPC_344 4 0.000
#> HSPC_350 2 1.000
#> HSPC_356 4 0.249
#> HSPC_362 4 0.249
#> HSPC_368 4 0.000
#> HSPC_374 3 0.000
#> LT-HSC_098 1 0.000
#> HSPC_338 1 0.000
#> HSPC_345 4 0.000
#> HSPC_351 4 0.000
#> HSPC_357 2 0.000
#> HSPC_363 2 0.751
#> HSPC_369 2 0.000
#> HSPC_375 2 0.000
#> LT-HSC_099 2 0.000
#> HSPC_339 3 0.000
#> HSPC_346 1 0.000
#> HSPC_352 4 0.000
#> HSPC_358 4 0.249
#> HSPC_364 4 1.000
#> HSPC_370 1 0.000
#> HSPC_376 4 0.000
#> LT-HSC_100 1 0.000
#> HSPC_340 2 0.747
#> HSPC_347 2 0.000
#> HSPC_353 1 0.000
#> HSPC_359 3 0.000
#> HSPC_365 2 1.000
#> HSPC_371 1 0.000
#> HSPC_377 4 0.000
#> LT-HSC_101 4 0.000
#> HSPC_341 1 1.000
#> HSPC_348 3 0.000
#> HSPC_354 2 1.000
#> HSPC_360 4 0.000
#> HSPC_366 2 0.000
#> HSPC_372 4 0.000
#> HSPC_378 2 0.249
#> LT-HSC_102 1 0.000
#> HSPC_342 1 0.000
#> Prog_343 1 1.000
#> Prog_349 4 0.000
#> Prog_355 4 0.253
#> Prog_361 1 0.000
#> Prog_367 1 0.000
#> Prog_373 1 0.000
#> LT-HSC_103 1 1.000
#> Prog_337 1 0.000
#> Prog_344 2 0.000
#> Prog_350 1 0.000
#> Prog_356 1 0.000
#> Prog_362 4 0.751
#> Prog_368 1 0.000
#> Prog_374 1 0.000
#> LT-HSC_104 2 0.000
#> Prog_338 1 1.000
#> Prog_345 4 0.000
#> Prog_351 1 0.000
#> Prog_357 1 0.000
#> Prog_363 1 0.000
#> Prog_369 4 0.000
#> Prog_375 1 0.000
#> LT-HSC_105 4 1.000
#> Prog_339 1 0.000
#> Prog_346 1 0.000
#> Prog_352 1 0.000
#> Prog_358 3 1.000
#> Prog_364 1 0.000
#> Prog_370 4 0.000
#> Prog_376 1 0.000
#> LT-HSC_106 4 0.000
#> Prog_340 1 0.000
#> Prog_347 2 0.000
#> Prog_353 1 1.000
#> Prog_359 1 0.000
#> Prog_365 2 0.000
#> Prog_371 1 1.000
#> Prog_377 1 0.000
#> LT-HSC_107 2 0.000
#> Prog_341 1 0.000
#> Prog_348 2 0.000
#> Prog_354 4 0.498
#> Prog_360 1 0.000
#> Prog_366 1 0.000
#> Prog_372 1 0.000
#> Prog_378 3 1.000
#> LT-HSC_108 1 0.000
#> Prog_342 1 0.000
#> HSPC_385 2 0.000
#> HSPC_391 3 0.000
#> HSPC_397 2 0.000
#> HSPC_403 4 0.249
#> HSPC_409 2 1.000
#> HSPC_415 2 0.498
#> HSPC_421 4 0.000
#> HSPC_379 2 0.000
#> HSPC_386 4 0.498
#> HSPC_392 3 0.000
#> HSPC_398 3 0.000
#> HSPC_404 1 0.000
#> HSPC_410 1 0.000
#> HSPC_416 3 0.000
#> HSPC_422 3 0.000
#> HSPC_380 3 0.502
#> HSPC_387 4 0.000
#> HSPC_393 4 0.502
#> HSPC_399 3 1.000
#> HSPC_405 3 0.249
#> HSPC_411 1 0.000
#> HSPC_417 1 1.000
#> HSPC_423 1 1.000
#> HSPC_381 2 0.000
#> HSPC_388 1 1.000
#> HSPC_394 2 0.000
#> HSPC_400 4 0.751
#> HSPC_406 4 1.000
#> HSPC_412 1 0.000
#> HSPC_418 3 0.000
#> HSPC_424 4 0.000
#> HSPC_382 1 1.000
#> HSPC_389 1 0.000
#> HSPC_395 4 1.000
#> HSPC_401 2 0.000
#> HSPC_407 1 0.000
#> HSPC_413 4 0.249
#> HSPC_419 1 0.000
#> HSPC_425 4 0.502
#> HSPC_383 2 0.000
#> HSPC_390 4 0.747
#> HSPC_396 3 0.000
#> HSPC_402 3 0.000
#> HSPC_408 1 0.000
#> HSPC_414 2 0.000
#> HSPC_420 1 1.000
#> HSPC_426 4 1.000
#> HSPC_384 2 0.000
#> Prog_385 1 0.000
#> Prog_391 2 0.000
#> Prog_397 1 0.000
#> Prog_403 1 0.000
#> Prog_409 1 0.000
#> Prog_415 1 0.000
#> Prog_421 1 0.000
#> Prog_379 1 0.000
#> Prog_386 1 0.000
#> Prog_392 1 1.000
#> Prog_398 1 0.000
#> Prog_404 1 0.000
#> Prog_410 1 0.000
#> Prog_416 1 0.000
#> Prog_422 4 1.000
#> Prog_380 1 0.000
#> Prog_387 1 0.000
#> Prog_393 1 0.000
#> Prog_399 1 1.000
#> Prog_405 1 0.751
#> Prog_411 4 1.000
#> Prog_417 4 0.000
#> Prog_423 4 0.000
#> Prog_381 1 0.000
#> Prog_388 1 0.000
#> Prog_394 3 1.000
#> Prog_400 2 0.000
#> Prog_406 1 0.000
#> Prog_412 1 0.000
#> Prog_418 1 0.000
#> Prog_424 1 0.000
#> Prog_382 3 0.751
#> Prog_389 1 0.000
#> Prog_395 1 0.000
#> Prog_401 1 0.498
#> Prog_407 3 0.249
#> Prog_413 1 1.000
#> Prog_419 1 0.000
#> Prog_425 1 0.000
#> Prog_383 1 0.000
#> Prog_390 4 0.000
#> Prog_396 1 0.000
#> Prog_402 4 0.000
#> Prog_408 1 0.000
#> Prog_414 1 0.000
#> Prog_420 1 0.000
#> Prog_426 1 0.000
#> Prog_384 4 1.000
#> HSPC_433 2 0.000
#> HSPC_439 2 0.000
#> HSPC_445 2 0.249
#> HSPC_451 2 0.000
#> HSPC_457 2 0.000
#> HSPC_463 3 0.000
#> LT-HSC_109 2 0.000
#> HSPC_427 2 1.000
#> HSPC_434 2 0.000
#> HSPC_440 4 1.000
#> HSPC_446 2 0.000
#> HSPC_452 2 0.000
#> HSPC_458 2 0.000
#> HSPC_464 2 0.000
#> LT-HSC_110 3 0.000
#> HSPC_428 2 0.000
#> HSPC_435 3 0.000
#> HSPC_441 3 0.000
#> HSPC_447 3 0.498
#> HSPC_453 3 0.000
#> HSPC_459 3 0.000
#> HSPC_465 3 1.000
#> LT-HSC_111 2 0.249
#> HSPC_429 2 0.000
#> HSPC_436 1 1.000
#> HSPC_442 1 1.000
#> HSPC_448 3 0.000
#> HSPC_454 1 1.000
#> HSPC_460 3 0.000
#> HSPC_466 4 0.747
#> LT-HSC_112 3 0.000
#> HSPC_430 3 0.000
#> HSPC_437 2 0.000
#> HSPC_443 3 1.000
#> HSPC_449 3 1.000
#> HSPC_455 2 1.000
#> HSPC_461 4 1.000
#> HSPC_467 3 0.249
#> LT-HSC_113 3 0.000
#> HSPC_431 3 0.249
#> HSPC_438 2 0.000
#> HSPC_444 2 0.000
#> HSPC_450 2 0.000
#> HSPC_456 1 1.000
#> HSPC_462 3 0.000
#> HSPC_468 3 0.249
#> LT-HSC_114 2 0.000
#> HSPC_432 2 0.000
#> Prog_433 3 0.747
#> Prog_439 3 0.000
#> Prog_445 3 0.000
#> Prog_451 1 0.000
#> Prog_457 1 0.000
#> Prog_463 3 0.000
#> LT-HSC_115 1 1.000
#> Prog_427 2 0.000
#> Prog_434 1 0.000
#> Prog_440 4 0.253
#> Prog_446 3 0.000
#> Prog_452 2 0.000
#> Prog_458 4 0.000
#> Prog_464 3 0.000
#> LT-HSC_116 3 0.000
#> Prog_428 1 1.000
#> Prog_435 4 0.000
#> Prog_441 1 0.000
#> Prog_447 1 0.253
#> Prog_453 1 0.000
#> Prog_459 3 0.000
#> Prog_465 4 0.000
#> LT-HSC_117 3 1.000
#> Prog_429 1 0.000
#> Prog_436 1 1.000
#> Prog_442 2 0.000
#> Prog_448 3 1.000
#> Prog_454 4 0.000
#> Prog_460 4 0.000
#> Prog_466 4 0.249
#> LT-HSC_118 2 0.000
#> Prog_430 1 0.000
#> Prog_437 1 1.000
#> Prog_443 1 1.000
#> Prog_449 1 0.000
#> Prog_455 3 0.751
#> Prog_461 2 1.000
#> Prog_467 3 0.000
#> LT-HSC_119 2 0.000
#> Prog_431 3 0.000
#> Prog_438 2 0.751
#> Prog_444 1 0.000
#> Prog_450 1 0.000
#> Prog_456 1 1.000
#> Prog_462 4 1.000
#> Prog_468 4 0.000
#> LT-HSC_120 4 1.000
#> Prog_432 4 0.000
#> HSPC_475 2 1.000
#> HSPC_481 2 0.000
#> HSPC_487 2 0.000
#> HSPC_493 2 1.000
#> HSPC_499 2 0.000
#> HSPC_505 4 1.000
#> LT-HSC_121 2 0.000
#> HSPC_469 2 0.000
#> HSPC_476 2 0.000
#> HSPC_482 2 1.000
#> HSPC_488 2 1.000
#> HSPC_494 2 0.000
#> HSPC_500 2 0.502
#> HSPC_506 2 0.498
#> LT-HSC_122 4 1.000
#> HSPC_470 2 1.000
#> HSPC_477 1 1.000
#> HSPC_483 2 0.751
#> HSPC_489 4 1.000
#> HSPC_495 4 0.000
#> HSPC_501 2 1.000
#> HSPC_507 2 0.502
#> LT-HSC_123 2 0.000
#> HSPC_471 2 1.000
#> HSPC_478 2 1.000
#> HSPC_484 2 0.000
#> HSPC_490 3 1.000
#> HSPC_496 3 0.747
#> HSPC_502 3 0.000
#> HSPC_508 1 0.249
#> LT-HSC_124 3 1.000
#> HSPC_472 3 0.000
#> HSPC_479 3 0.751
#> HSPC_485 1 0.000
#> HSPC_491 4 0.000
#> HSPC_497 2 0.249
#> HSPC_503 1 0.751
#> HSPC_509 4 0.000
#> LT-HSC_125 3 0.000
#> HSPC_473 3 0.000
#> HSPC_480 3 0.000
#> HSPC_486 4 1.000
#> HSPC_492 3 1.000
#> HSPC_498 3 1.000
#> HSPC_504 2 0.502
#> HSPC_510 4 0.000
#> LT-HSC_126 3 0.000
#> HSPC_474 3 0.000
#> Prog_475 1 0.000
#> Prog_481 3 0.000
#> Prog_487 1 0.000
#> Prog_493 1 0.498
#> Prog_499 1 0.000
#> Prog_505 1 0.000
#> LT-HSC_127 2 0.000
#> Prog_469 4 1.000
#> Prog_476 1 0.000
#> Prog_482 1 1.000
#> Prog_488 1 0.000
#> Prog_494 4 1.000
#> Prog_500 1 0.000
#> Prog_506 1 0.000
#> LT-HSC_128 3 0.000
#> Prog_470 1 0.000
#> Prog_477 1 0.000
#> Prog_483 4 0.000
#> Prog_489 1 0.000
#> Prog_495 3 0.000
#> Prog_501 1 1.000
#> Prog_507 4 0.000
#> LT-HSC_129 2 0.000
#> Prog_471 1 0.000
#> Prog_478 1 0.000
#> Prog_484 1 0.751
#> Prog_490 4 0.000
#> Prog_496 3 0.000
#> Prog_502 1 0.000
#> Prog_508 1 0.000
#> LT-HSC_130 1 1.000
#> Prog_472 4 1.000
#> Prog_479 1 1.000
#> Prog_485 1 1.000
#> Prog_491 1 0.000
#> Prog_497 4 0.000
#> Prog_503 4 0.000
#> Prog_509 3 1.000
#> LT-HSC_131 3 0.000
#> Prog_473 1 0.000
#> Prog_480 2 0.000
#> Prog_486 1 0.000
#> Prog_492 3 1.000
#> Prog_498 2 0.000
#> Prog_504 1 0.000
#> Prog_510 4 1.000
#> LT-HSC_132 1 0.000
#> Prog_474 3 1.000
#> HSPC_517 2 1.000
#> HSPC_523 3 1.000
#> HSPC_529 2 0.000
#> HSPC_535 2 1.000
#> HSPC_541 2 1.000
#> HSPC_547 3 0.000
#> LT-HSC_133 2 0.000
#> HSPC_511 2 1.000
#> HSPC_518 2 0.751
#> HSPC_524 2 1.000
#> HSPC_530 2 0.253
#> HSPC_536 2 0.000
#> HSPC_542 2 0.000
#> HSPC_548 2 0.502
#> LT-HSC_134 2 0.751
#> HSPC_512 3 0.000
#> HSPC_519 2 0.000
#> HSPC_525 2 1.000
#> HSPC_531 2 0.000
#> HSPC_537 4 0.498
#> HSPC_543 4 0.000
#> HSPC_549 2 0.502
#> LT-HSC_135 2 0.751
#> HSPC_513 2 0.000
#> HSPC_520 4 1.000
#> HSPC_526 3 0.498
#> HSPC_532 4 0.000
#> HSPC_538 3 0.000
#> HSPC_544 1 0.000
#> HSPC_550 4 0.000
#> LT-HSC_136 2 0.502
#> HSPC_514 3 1.000
#> HSPC_521 2 0.000
#> HSPC_527 1 1.000
#> HSPC_533 3 0.000
#> HSPC_539 2 1.000
#> HSPC_545 2 1.000
#> HSPC_551 4 1.000
#> LT-HSC_137 2 0.253
#> HSPC_515 3 0.000
#> HSPC_522 2 1.000
#> HSPC_528 4 1.000
#> HSPC_534 3 0.000
#> HSPC_540 3 0.000
#> HSPC_546 2 1.000
#> HSPC_552 4 1.000
#> LT-HSC_138 2 1.000
#> HSPC_516 3 0.000
#> Prog_517 3 1.000
#> Prog_523 1 0.000
#> Prog_529 1 0.000
#> Prog_535 1 1.000
#> Prog_541 1 0.000
#> Prog_547 1 0.000
#> LT-HSC_139 3 0.000
#> Prog_511 3 0.751
#> Prog_518 4 0.000
#> Prog_524 4 1.000
#> Prog_530 1 0.000
#> Prog_536 1 0.000
#> Prog_542 4 1.000
#> Prog_548 1 0.751
#> LT-HSC_140 2 1.000
#> Prog_512 4 0.000
#> Prog_519 4 1.000
#> Prog_525 4 0.000
#> Prog_531 1 0.000
#> Prog_537 2 1.000
#> Prog_543 1 0.000
#> Prog_549 4 0.000
#> LT-HSC_141 2 0.000
#> Prog_513 3 0.000
#> Prog_520 1 0.000
#> Prog_526 2 1.000
#> Prog_532 2 0.502
#> Prog_538 2 0.502
#> Prog_544 2 0.751
#> Prog_550 1 0.000
#> LT-HSC_142 1 0.000
#> Prog_514 1 0.502
#> Prog_521 1 1.000
#> Prog_527 1 0.000
#> Prog_533 2 1.000
#> Prog_539 4 0.000
#> Prog_545 1 0.000
#> Prog_551 1 0.000
#> LT-HSC_143 1 1.000
#> Prog_515 4 1.000
#> Prog_522 2 0.751
#> Prog_528 1 0.000
#> Prog_534 4 0.000
#> Prog_540 2 0.502
#> Prog_546 2 1.000
#> Prog_552 4 0.000
#> LT-HSC_144 4 0.751
#> Prog_516 1 0.000
#> HSPC_559 2 1.000
#> HSPC_565 2 0.000
#> HSPC_571 3 0.000
#> HSPC_577 2 1.000
#> HSPC_583 2 0.000
#> HSPC_589 2 0.000
#> LT-HSC_145 2 1.000
#> HSPC_553 1 1.000
#> HSPC_560 2 0.000
#> HSPC_566 2 1.000
#> HSPC_572 2 0.000
#> HSPC_578 2 0.000
#> HSPC_584 2 1.000
#> HSPC_590 4 0.747
#> LT-HSC_146 3 1.000
#> HSPC_554 2 0.751
#> HSPC_561 2 0.000
#> HSPC_567 3 0.000
#> HSPC_573 2 1.000
#> HSPC_579 3 1.000
#> HSPC_585 2 0.000
#> HSPC_591 2 0.000
#> LT-HSC_147 2 0.253
#> HSPC_555 2 1.000
#> HSPC_562 2 0.502
#> HSPC_568 2 1.000
#> HSPC_574 1 0.000
#> HSPC_580 3 0.000
#> HSPC_586 3 0.000
#> HSPC_592 3 0.000
#> LT-HSC_148 4 1.000
#> HSPC_556 3 0.000
#> HSPC_563 3 1.000
#> HSPC_569 4 1.000
#> HSPC_575 3 0.000
#> HSPC_581 2 0.000
#> HSPC_587 2 0.000
#> HSPC_593 2 1.000
#> LT-HSC_149 2 1.000
#> HSPC_557 3 0.000
#> HSPC_564 2 0.000
#> HSPC_570 2 0.000
#> HSPC_576 2 1.000
#> HSPC_582 2 1.000
#> HSPC_588 2 0.000
#> HSPC_594 2 1.000
#> LT-HSC_150 2 0.000
#> HSPC_558 2 0.000
#> Prog_559 1 0.502
#> Prog_565 1 0.747
#> Prog_571 1 0.751
#> Prog_577 1 0.000
#> Prog_583 2 1.000
#> Prog_589 2 0.000
#> LT-HSC_151 3 0.000
#> Prog_553 4 0.000
#> Prog_560 1 0.000
#> Prog_566 1 0.000
#> Prog_572 3 0.000
#> Prog_578 4 0.000
#> Prog_584 1 0.000
#> Prog_590 1 1.000
#> LT-HSC_152 2 0.000
#> Prog_554 3 0.000
#> Prog_561 4 0.751
#> Prog_567 1 0.000
#> Prog_573 2 0.000
#> Prog_579 1 0.000
#> Prog_585 3 0.000
#> Prog_591 2 1.000
#> LT-HSC_153 2 0.249
#> Prog_555 3 0.000
#> Prog_562 1 0.000
#> Prog_568 3 0.249
#> Prog_574 1 0.000
#> Prog_580 3 0.249
#> Prog_586 4 0.000
#> Prog_592 1 0.000
#> LT-HSC_154 2 0.000
#> Prog_556 3 0.000
#> Prog_563 2 0.000
#> Prog_569 1 0.000
#> Prog_575 1 0.000
#> Prog_581 1 1.000
#> Prog_587 1 1.000
#> Prog_593 1 1.000
#> LT-HSC_155 2 0.000
#> Prog_557 1 1.000
#> Prog_564 3 0.249
#> Prog_570 4 1.000
#> Prog_576 1 0.249
#> Prog_582 1 0.000
#> Prog_588 3 0.000
#> Prog_594 3 0.249
#> LT-HSC_156 1 1.000
#> Prog_558 3 1.000
#> HSPC_601 4 0.000
#> HSPC_607 2 0.502
#> HSPC_613 4 0.747
#> HSPC_619 2 0.000
#> HSPC_625 2 1.000
#> HSPC_631 4 0.000
#> LT-HSC_157 2 0.249
#> HSPC_595 3 0.000
#> HSPC_602 2 0.000
#> HSPC_608 2 0.000
#> HSPC_614 4 1.000
#> HSPC_620 2 1.000
#> HSPC_626 2 0.249
#> HSPC_632 2 0.000
#> LT-HSC_158 2 1.000
#> HSPC_596 4 1.000
#> HSPC_603 3 0.498
#> HSPC_609 2 0.000
#> HSPC_615 2 0.249
#> HSPC_621 2 0.000
#> HSPC_627 4 0.747
#> HSPC_633 2 1.000
#> LT-HSC_159 4 0.000
#> HSPC_597 4 1.000
#> HSPC_604 2 0.498
#> HSPC_610 2 1.000
#> HSPC_616 2 0.000
#> HSPC_622 2 0.000
#> HSPC_628 4 1.000
#> HSPC_634 4 1.000
#> LT-HSC_160 2 0.000
#> HSPC_598 4 0.747
#> HSPC_605 2 0.000
#> HSPC_611 2 0.000
#> HSPC_617 3 0.000
#> HSPC_623 4 0.000
#> HSPC_629 4 0.249
#> HSPC_635 4 0.000
#> LT-HSC_161 2 0.000
#> HSPC_599 2 0.000
#> HSPC_606 3 0.000
#> HSPC_612 3 1.000
#> HSPC_618 2 0.751
#> HSPC_624 3 0.000
#> HSPC_630 2 1.000
#> HSPC_636 3 0.498
#> LT-HSC_162 2 0.000
#> HSPC_600 2 0.249
#> Prog_601 2 0.000
#> Prog_607 1 0.253
#> Prog_613 3 0.000
#> Prog_619 2 1.000
#> Prog_625 4 0.000
#> Prog_631 3 0.000
#> LT-HSC_163 2 0.000
#> Prog_595 2 1.000
#> Prog_602 1 1.000
#> Prog_608 1 0.000
#> Prog_614 1 1.000
#> Prog_620 4 0.000
#> Prog_626 1 0.000
#> Prog_632 1 1.000
#> LT-HSC_164 3 1.000
#> Prog_596 3 0.000
#> Prog_603 1 0.000
#> Prog_609 1 1.000
#> Prog_615 4 0.498
#> Prog_621 1 0.000
#> Prog_627 3 1.000
#> Prog_633 4 1.000
#> LT-HSC_165 2 0.253
#> Prog_597 3 0.000
#> Prog_604 3 0.000
#> Prog_610 3 0.000
#> Prog_616 1 0.000
#> Prog_622 1 0.000
#> Prog_628 1 0.000
#> Prog_634 4 0.000
#> LT-HSC_166 4 0.502
#> Prog_598 1 0.000
#> Prog_605 1 0.000
#> Prog_611 3 0.249
#> Prog_617 3 0.000
#> Prog_623 1 0.751
#> Prog_629 1 1.000
#> Prog_635 3 0.000
#> LT-HSC_167 2 0.498
#> Prog_599 1 1.000
#> Prog_606 3 1.000
#> Prog_612 1 1.000
#> Prog_618 1 1.000
#> Prog_624 1 1.000
#> Prog_630 1 0.000
#> Prog_636 2 0.000
#> LT-HSC_168 1 0.000
#> Prog_600 1 1.000
#> HSPC_643 4 0.751
#> HSPC_649 3 0.000
#> HSPC_655 2 0.000
#> HSPC_661 4 0.249
#> HSPC_667 2 0.000
#> HSPC_673 2 0.747
#> LT-HSC_169 2 1.000
#> HSPC_637 3 1.000
#> HSPC_644 1 1.000
#> HSPC_650 2 0.000
#> HSPC_656 2 0.000
#> HSPC_662 2 0.751
#> HSPC_668 3 0.249
#> HSPC_674 3 0.000
#> LT-HSC_170 4 1.000
#> HSPC_638 1 1.000
#> HSPC_645 3 0.000
#> HSPC_651 4 0.000
#> HSPC_657 2 0.000
#> HSPC_663 4 0.502
#> HSPC_669 2 0.502
#> HSPC_675 2 0.000
#> LT-HSC_171 4 0.747
#> HSPC_639 3 0.000
#> HSPC_646 3 0.000
#> HSPC_652 4 1.000
#> HSPC_658 4 0.000
#> HSPC_664 3 0.000
#> HSPC_670 2 0.751
#> HSPC_676 2 0.249
#> LT-HSC_172 2 0.000
#> HSPC_640 3 0.000
#> HSPC_647 2 0.000
#> HSPC_653 2 0.000
#> HSPC_659 2 0.000
#> HSPC_665 4 1.000
#> HSPC_671 3 0.000
#> HSPC_677 2 0.498
#> LT-HSC_173 2 0.000
#> HSPC_641 3 0.000
#> HSPC_648 2 0.000
#> HSPC_654 4 1.000
#> HSPC_660 4 0.000
#> HSPC_666 4 0.253
#> HSPC_672 3 0.000
#> HSPC_678 2 0.253
#> LT-HSC_174 3 0.000
#> HSPC_642 2 0.000
#> Prog_643 4 0.000
#> Prog_649 1 0.000
#> Prog_655 1 0.000
#> Prog_661 1 0.000
#> Prog_667 4 1.000
#> Prog_673 4 0.502
#> LT-HSC_175 2 0.000
#> Prog_637 1 0.000
#> Prog_644 3 0.000
#> Prog_650 1 0.000
#> Prog_656 3 0.747
#> Prog_662 3 1.000
#> Prog_668 2 1.000
#> Prog_674 3 1.000
#> LT-HSC_176 2 0.000
#> Prog_638 1 0.000
#> Prog_645 4 1.000
#> Prog_651 3 0.000
#> Prog_657 1 0.000
#> Prog_663 1 0.000
#> Prog_669 2 1.000
#> Prog_675 1 0.000
#> LT-HSC_177 2 1.000
#> Prog_639 1 0.000
#> Prog_646 1 0.000
#> Prog_652 1 0.249
#> Prog_658 1 0.000
#> Prog_664 2 0.253
#> Prog_670 1 0.000
#> Prog_676 3 0.000
#> LT-HSC_178 2 0.000
#> Prog_640 1 0.000
#> Prog_647 4 1.000
#> Prog_653 4 0.751
#> Prog_659 3 0.498
#> Prog_665 3 0.000
#> Prog_671 3 0.751
#> Prog_677 1 0.000
#> LT-HSC_179 3 0.000
#> Prog_641 2 1.000
#> Prog_648 4 0.253
#> Prog_654 1 1.000
#> Prog_660 3 0.000
#> Prog_666 3 0.000
#> Prog_672 3 0.000
#> Prog_678 4 0.000
#> LT-HSC_180 4 0.751
#> Prog_642 3 0.000
#> HSPC_685 2 0.000
#> HSPC_691 2 0.249
#> HSPC_697 4 0.000
#> HSPC_703 2 0.751
#> HSPC_709 2 1.000
#> HSPC_715 2 0.000
#> LT-HSC_181 2 0.000
#> HSPC_679 3 1.000
#> HSPC_686 2 0.000
#> HSPC_692 2 0.000
#> HSPC_698 2 1.000
#> HSPC_704 2 1.000
#> HSPC_710 2 0.000
#> HSPC_716 2 0.000
#> LT-HSC_182 2 0.000
#> HSPC_680 2 0.000
#> HSPC_687 2 0.000
#> HSPC_693 2 1.000
#> HSPC_699 2 1.000
#> HSPC_705 1 0.000
#> HSPC_711 2 0.000
#> HSPC_717 4 1.000
#> LT-HSC_183 3 0.498
#> HSPC_681 4 1.000
#> HSPC_688 2 0.000
#> HSPC_694 2 0.000
#> HSPC_700 4 0.751
#> HSPC_706 3 0.751
#> HSPC_712 2 0.000
#> HSPC_718 2 0.000
#> LT-HSC_184 3 1.000
#> HSPC_682 1 0.000
#> HSPC_689 2 0.751
#> HSPC_695 1 1.000
#> HSPC_701 4 1.000
#> HSPC_707 4 0.000
#> HSPC_713 2 0.000
#> HSPC_719 2 0.000
#> LT-HSC_185 2 0.000
#> HSPC_683 4 0.751
#> HSPC_690 2 1.000
#> HSPC_696 4 0.253
#> HSPC_702 2 0.253
#> HSPC_708 3 1.000
#> HSPC_714 2 0.000
#> HSPC_720 1 0.000
#> LT-HSC_186 2 0.000
#> HSPC_684 2 0.000
#> Prog_685 1 0.000
#> Prog_691 2 0.000
#> Prog_697 1 0.000
#> Prog_703 4 0.000
#> Prog_709 1 0.000
#> Prog_715 1 0.000
#> LT-HSC_187 3 1.000
#> Prog_679 1 0.000
#> Prog_686 4 0.000
#> Prog_692 3 0.000
#> Prog_698 1 0.000
#> Prog_704 3 0.000
#> Prog_710 3 0.000
#> Prog_716 3 0.000
#> LT-HSC_188 3 1.000
#> Prog_680 1 1.000
#> Prog_687 1 0.000
#> Prog_693 1 1.000
#> Prog_699 1 0.751
#> Prog_705 1 0.000
#> Prog_711 3 0.000
#> Prog_717 1 0.000
#> LT-HSC_189 2 0.000
#> Prog_681 1 0.000
#> Prog_688 1 0.000
#> Prog_694 3 0.253
#> Prog_700 1 0.000
#> Prog_706 1 0.000
#> Prog_712 1 1.000
#> Prog_718 1 0.000
#> LT-HSC_190 2 0.000
#> Prog_682 1 1.000
#> Prog_689 3 0.000
#> Prog_695 1 0.000
#> Prog_701 1 0.000
#> Prog_707 3 1.000
#> Prog_713 1 0.000
#> Prog_719 1 0.000
#> LT-HSC_191 3 1.000
#> Prog_683 2 1.000
#> Prog_690 3 0.000
#> Prog_696 4 0.000
#> Prog_702 1 0.000
#> Prog_708 1 0.000
#> Prog_714 1 0.000
#> Prog_720 1 0.000
#> LT-HSC_192 1 1.000
#> Prog_684 3 0.000
#> HSPC_727 2 0.000
#> HSPC_733 2 0.249
#> HSPC_739 2 0.249
#> HSPC_745 2 0.249
#> HSPC_751 2 0.000
#> HSPC_757 2 0.751
#> LT-HSC_193 2 0.751
#> HSPC_721 2 0.000
#> HSPC_728 2 0.000
#> HSPC_734 1 0.000
#> HSPC_740 2 0.000
#> HSPC_746 2 1.000
#> HSPC_752 2 1.000
#> HSPC_758 3 0.000
#> LT-HSC_194 2 0.000
#> HSPC_722 3 0.000
#> HSPC_729 3 0.000
#> HSPC_735 4 1.000
#> HSPC_741 2 0.000
#> HSPC_747 2 1.000
#> HSPC_753 3 0.000
#> HSPC_759 3 0.000
#> LT-HSC_195 3 0.000
#> HSPC_723 3 0.000
#> HSPC_730 3 1.000
#> HSPC_736 3 0.000
#> HSPC_742 3 0.000
#> HSPC_748 2 0.747
#> HSPC_754 2 0.000
#> HSPC_760 4 0.751
#> LT-HSC_196 2 0.000
#> HSPC_724 3 0.000
#> HSPC_731 4 1.000
#> HSPC_737 1 0.000
#> HSPC_743 3 0.000
#> HSPC_749 2 0.498
#> HSPC_755 3 0.000
#> HSPC_761 3 0.000
#> LT-HSC_197 2 0.000
#> HSPC_725 2 0.000
#> HSPC_732 3 0.000
#> HSPC_738 2 0.000
#> HSPC_744 4 0.249
#> HSPC_750 3 0.000
#> HSPC_756 2 0.000
#> HSPC_762 4 1.000
#> LT-HSC_198 2 0.000
#> HSPC_726 2 0.000
#> Prog_727 1 0.000
#> Prog_733 3 0.000
#> Prog_739 4 0.000
#> Prog_745 3 0.000
#> Prog_751 3 1.000
#> Prog_757 4 0.000
#> LT-HSC_199 2 0.000
#> Prog_721 1 0.000
#> Prog_728 3 0.000
#> Prog_734 1 0.000
#> Prog_740 3 0.000
#> Prog_746 4 0.000
#> Prog_752 3 0.253
#> Prog_758 3 0.249
#> LT-HSC_200 2 0.000
#> Prog_722 1 0.000
#> Prog_729 2 0.000
#> Prog_735 1 0.000
#> Prog_741 2 0.000
#> Prog_747 3 0.751
#> Prog_753 1 0.000
#> Prog_759 1 0.000
#> LT-HSC_201 2 0.000
#> Prog_723 1 0.000
#> Prog_730 1 0.000
#> Prog_736 1 1.000
#> Prog_742 2 0.000
#> Prog_748 4 0.000
#> Prog_754 1 0.000
#> Prog_760 1 1.000
#> LT-HSC_202 3 0.498
#> Prog_724 3 0.000
#> Prog_731 1 0.000
#> Prog_737 3 0.000
#> Prog_743 1 0.000
#> Prog_749 4 0.000
#> Prog_755 2 0.000
#> Prog_761 4 1.000
#> LT-HSC_203 2 0.000
#> Prog_725 3 0.000
#> Prog_732 4 0.000
#> Prog_738 3 1.000
#> Prog_744 3 1.000
#> Prog_750 4 1.000
#> Prog_756 4 0.000
#> Prog_762 3 0.000
#> LT-HSC_204 3 0.000
#> Prog_726 3 1.000
#> HSPC_769 2 1.000
#> HSPC_775 2 0.000
#> HSPC_781 2 0.000
#> HSPC_787 2 0.000
#> HSPC_793 2 0.000
#> HSPC_799 2 0.000
#> LT-HSC_205 2 0.000
#> HSPC_763 2 0.000
#> HSPC_770 4 0.000
#> HSPC_776 2 0.253
#> HSPC_782 2 0.000
#> HSPC_788 2 0.000
#> HSPC_794 3 0.000
#> HSPC_800 4 0.249
#> LT-HSC_206 2 0.000
#> HSPC_764 2 0.000
#> HSPC_771 3 0.000
#> HSPC_777 3 0.000
#> HSPC_783 2 0.751
#> HSPC_789 4 1.000
#> HSPC_795 3 1.000
#> HSPC_801 3 0.000
#> LT-HSC_207 4 0.000
#> HSPC_765 2 0.000
#> HSPC_772 4 1.000
#> HSPC_778 3 1.000
#> HSPC_784 3 0.000
#> HSPC_790 4 1.000
#> HSPC_796 1 0.000
#> HSPC_802 2 0.502
#> LT-HSC_208 2 1.000
#> HSPC_766 1 0.747
#> HSPC_773 3 0.000
#> HSPC_779 4 1.000
#> HSPC_785 3 0.249
#> HSPC_791 4 0.000
#> HSPC_797 3 0.000
#> HSPC_803 2 1.000
#> LT-HSC_209 2 0.000
#> HSPC_767 1 1.000
#> HSPC_774 3 0.751
#> HSPC_780 3 0.000
#> HSPC_786 3 0.000
#> HSPC_792 2 0.000
#> HSPC_798 2 0.000
#> HSPC_804 2 0.498
#> LT-HSC_210 2 0.000
#> HSPC_768 2 0.000
#> Prog_769 1 1.000
#> Prog_775 3 0.000
#> Prog_781 1 0.000
#> Prog_787 4 0.000
#> Prog_793 1 1.000
#> Prog_799 3 0.249
#> LT-HSC_211 4 1.000
#> Prog_763 1 1.000
#> Prog_770 1 0.000
#> Prog_776 1 0.000
#> Prog_782 1 1.000
#> Prog_788 1 0.000
#> Prog_794 1 1.000
#> Prog_800 1 0.000
#> LT-HSC_212 3 0.000
#> Prog_764 1 1.000
#> Prog_771 1 0.000
#> Prog_777 1 0.000
#> Prog_783 1 0.000
#> Prog_789 1 0.000
#> Prog_795 1 0.000
#> Prog_801 1 1.000
#> LT-HSC_213 2 0.000
#> Prog_765 1 0.000
#> Prog_772 1 0.000
#> Prog_778 2 1.000
#> Prog_784 3 0.000
#> Prog_790 1 0.000
#> Prog_796 4 0.000
#> Prog_802 1 0.000
#> LT-HSC_214 3 0.000
#> Prog_766 2 0.000
#> Prog_773 2 0.000
#> Prog_779 1 0.000
#> Prog_785 3 0.249
#> Prog_791 1 0.000
#> Prog_797 3 1.000
#> Prog_803 4 1.000
#> LT-HSC_215 3 0.000
#> Prog_767 1 0.000
#> Prog_774 1 0.000
#> Prog_780 1 0.000
#> Prog_786 1 0.000
#> Prog_792 1 0.000
#> Prog_798 1 1.000
#> Prog_804 1 1.000
#> LT-HSC_216 4 0.000
#> Prog_768 1 0.751
#> HSPC_811 2 0.000
#> HSPC_817 2 0.000
#> HSPC_823 2 0.000
#> HSPC_829 2 0.000
#> HSPC_835 3 0.000
#> HSPC_841 4 0.000
#> HSPC_847 2 0.000
#> HSPC_805 2 0.000
#> HSPC_812 1 1.000
#> HSPC_818 3 0.000
#> HSPC_824 3 0.249
#> HSPC_830 2 0.000
#> HSPC_836 2 0.249
#> HSPC_842 2 0.000
#> HSPC_848 2 0.000
#> HSPC_806 2 0.000
#> HSPC_813 1 1.000
#> HSPC_819 4 1.000
#> HSPC_825 3 0.000
#> HSPC_831 3 0.000
#> HSPC_837 4 0.253
#> HSPC_843 3 0.000
#> HSPC_849 2 0.000
#> HSPC_807 1 0.000
#> HSPC_814 4 0.000
#> HSPC_820 1 1.000
#> HSPC_826 3 1.000
#> HSPC_832 3 0.000
#> HSPC_838 3 0.000
#> HSPC_844 2 0.502
#> HSPC_850 2 0.000
#> HSPC_808 1 1.000
#> HSPC_815 3 0.000
#> HSPC_821 4 1.000
#> HSPC_827 2 0.000
#> HSPC_833 1 0.000
#> HSPC_839 4 0.751
#> HSPC_845 3 0.000
#> HSPC_851 2 0.000
#> HSPC_809 2 0.747
#> HSPC_816 4 1.000
#> HSPC_822 3 1.000
#> HSPC_828 3 0.000
#> HSPC_834 3 0.000
#> HSPC_840 2 1.000
#> HSPC_846 4 1.000
#> HSPC_852 2 0.000
#> HSPC_810 2 1.000
#> Prog_811 1 0.000
#> Prog_817 1 1.000
#> Prog_823 3 0.000
#> Prog_829 1 0.000
#> Prog_835 1 0.000
#> Prog_841 4 0.000
#> Prog_847 1 0.000
#> Prog_805 4 0.502
#> Prog_812 2 1.000
#> Prog_818 1 0.000
#> Prog_824 1 0.000
#> Prog_830 1 0.000
#> Prog_836 1 0.000
#> Prog_842 1 0.000
#> Prog_848 2 0.000
#> Prog_806 3 0.000
#> Prog_813 1 0.000
#> Prog_819 1 0.000
#> Prog_825 1 0.000
#> Prog_831 1 0.000
#> Prog_837 1 0.000
#> Prog_843 1 0.751
#> Prog_849 4 0.747
#> Prog_807 1 0.000
#> Prog_814 1 0.000
#> Prog_820 1 1.000
#> Prog_826 1 0.000
#> Prog_832 1 0.000
#> Prog_838 1 0.000
#> Prog_844 1 0.000
#> Prog_850 1 0.000
#> Prog_808 1 1.000
#> Prog_815 1 0.000
#> Prog_821 1 0.000
#> Prog_827 3 0.249
#> Prog_833 1 1.000
#> Prog_839 1 0.000
#> Prog_845 1 0.000
#> Prog_851 3 0.000
#> Prog_809 1 0.249
#> Prog_816 1 0.000
#> Prog_822 1 0.000
#> Prog_828 1 0.000
#> Prog_834 1 1.000
#> Prog_840 1 1.000
#> Prog_846 1 0.000
#> Prog_852 4 1.000
#> Prog_810 1 1.000
Heatmaps for the consensus matrix. It visualizes the probability of two samples to be in a same group.
consensus_heatmap(res, k = 2)
consensus_heatmap(res, k = 3)
consensus_heatmap(res, k = 4)
Heatmaps for the membership of samples in all partitions to see how consistent they are:
membership_heatmap(res, k = 2)
membership_heatmap(res, k = 3)
membership_heatmap(res, k = 4)
As soon as the classes for columns are determined, the signatures that are significantly different between subgroups can be looked for. Following are the heatmaps for signatures.
Signature heatmaps where rows are scaled:
Signature heatmaps where rows are not scaled:
get_signatures(res, k = 2, scale_rows = FALSE)
get_signatures(res, k = 3, scale_rows = FALSE)
get_signatures(res, k = 4, scale_rows = FALSE)
Compare the overlap of signatures from different k:
compare_signatures(res)
get_signature() returns a data frame invisibly. To get the list of signatures, the function
call should be assigned to a variable explicitly. In following code, if plot argument is set
to FALSE, no heatmap is plotted while only the differential analysis is performed.
# code only for demonstration
tb = get_signature(res, k = ..., plot = FALSE)
An example of the output of tb is:
#> which_row fdr mean_1 mean_2 scaled_mean_1 scaled_mean_2 km
#> 1 38 0.042760348 8.373488 9.131774 -0.5533452 0.5164555 1
#> 2 40 0.018707592 7.106213 8.469186 -0.6173731 0.5762149 1
#> 3 55 0.019134737 10.221463 11.207825 -0.6159697 0.5749050 1
#> 4 59 0.006059896 5.921854 7.869574 -0.6899429 0.6439467 1
#> 5 60 0.018055526 8.928898 10.211722 -0.6204761 0.5791110 1
#> 6 98 0.009384629 15.714769 14.887706 0.6635654 -0.6193277 2
...
The columns in tb are:
which_row: row indices corresponding to the input matrix.fdr: FDR for the differential test. mean_x: The mean value in group x.scaled_mean_x: The mean value in group x after rows are scaled.km: Row groups if k-means clustering is applied to rows (which is done by automatically selecting number of clusters).If there are too many signatures, top_signatures = ... can be set to only show the
signatures with the highest FDRs:
# code only for demonstration
# e.g. to show the top 500 most significant rows
tb = get_signature(res, k = ..., top_signatures = 500)
If the signatures are defined as these which are uniquely high in current group, diff_method argument
can be set to "uniquely_high_in_one_group":
# code only for demonstration
tb = get_signature(res, k = ..., diff_method = "uniquely_high_in_one_group")
UMAP plot which shows how samples are separated.
dimension_reduction(res, k = 2, method = "UMAP")
dimension_reduction(res, k = 3, method = "UMAP")
dimension_reduction(res, k = 4, method = "UMAP")
Following heatmap shows how subgroups are split when increasing k:
collect_classes(res)
If matrix rows can be associated to genes, consider to use functional_enrichment(res,
...) to perform function enrichment for the signature genes. See this vignette for more detailed explanations.
Parent node: Node0. Child nodes: Node011 , Node012 , Node013 , Node014 , Node021 , Node022-leaf , Node023-leaf , Node031 , Node032 , Node033 , Node041 , Node042 , Node043-leaf .
The object with results only for a single top-value method and a single partitioning method can be extracted as:
res = res_rh["01"]
A summary of res and all the functions that can be applied to it:
res
#> A 'DownSamplingConsensusPartition' object with k = 2, 3, 4.
#> On a matrix with 22269 rows and 500 columns, randomly sampled from 598 columns.
#> Top rows (1911) are extracted by 'ATC' method.
#> Subgroups are detected by 'skmeans' method.
#> Performed in total 150 partitions by row resampling.
#> Best k for subgroups seems to be 4.
#>
#> Following methods can be applied to this 'DownSamplingConsensusPartition' object:
#> [1] "cola_report" "collect_classes" "collect_plots"
#> [4] "collect_stats" "colnames" "compare_partitions"
#> [7] "compare_signatures" "consensus_heatmap" "dimension_reduction"
#> [10] "functional_enrichment" "get_anno_col" "get_anno"
#> [13] "get_classes" "get_consensus" "get_matrix"
#> [16] "get_membership" "get_param" "get_signatures"
#> [19] "get_stats" "is_best_k" "is_stable_k"
#> [22] "membership_heatmap" "ncol" "nrow"
#> [25] "plot_ecdf" "predict_classes" "rownames"
#> [28] "select_partition_number" "show" "suggest_best_k"
#> [31] "test_to_known_factors" "top_rows_heatmap"
collect_plots() function collects all the plots made from res for all k (number of subgroups)
into one single page to provide an easy and fast comparison between different k.
collect_plots(res)
The plots are:
k and the heatmap of
predicted classes for each k.k.k.k.All the plots in panels can be made by individual functions and they are plotted later in this section.
select_partition_number() produces several plots showing different
statistics for choosing “optimized” k. There are following statistics:
k;k, the area increased is defined as \(A_k - A_{k-1}\).The detailed explanations of these statistics can be found in the cola vignette.
Generally speaking, higher 1-PAC score, higher mean silhouette score or higher
concordance corresponds to better partition. Rand index and Jaccard index
measure how similar the current partition is compared to partition with k-1.
If they are too similar, we won't accept k is better than k-1.
select_partition_number(res)
The numeric values for all these statistics can be obtained by get_stats().
get_stats(res)
#> k 1-PAC mean_silhouette concordance area_increased Rand Jaccard
#> 2 2 1 0.987 0.995 0.4993 0.502 0.502
#> 3 3 1 0.982 0.989 0.2551 0.825 0.667
#> 4 4 1 0.987 0.995 0.0975 0.922 0.795
suggest_best_k() suggests the best \(k\) based on these statistics. The rules are as follows:
suggest_best_k(res)
#> [1] 4
#> attr(,"optional")
#> [1] 2 3
There is also optional best \(k\) = 2 3 that is worth to check.
Following is the table of the partitions (You need to click the show/hide
code output link to see it). The membership matrix (columns with name p*)
is inferred by
clue::cl_consensus()
function with the SE method. Basically the value in the membership matrix
represents the probability to belong to a certain group. The finall subgroup
label for an item is determined with the group with highest probability it
belongs to.
In get_classes() function, the entropy is calculated from the membership
matrix and the silhouette score is calculated from the consensus matrix.
get_classes(res, k = 2)
#> class p
#> HSPC_001 2 0.502
#> HSPC_003 2 0.000
#> HSPC_016 2 0.000
#> HSPC_034 2 0.000
#> HSPC_036 2 0.000
#> Prog_007 2 0.253
#> Prog_013 2 0.000
#> Prog_019 1 0.000
#> Prog_008 1 0.000
#> Prog_014 1 0.000
#> Prog_020 2 0.000
#> Prog_032 2 0.000
#> Prog_038 1 0.502
#> Prog_002 2 0.000
#> Prog_009 1 0.000
#> Prog_015 2 0.000
#> Prog_021 2 0.000
#> Prog_027 2 0.000
#> Prog_033 1 0.000
#> Prog_039 1 0.000
#> Prog_003 2 0.000
#> Prog_028 1 0.000
#> Prog_011 2 0.000
#> Prog_017 2 0.000
#> Prog_023 2 0.000
#> Prog_029 2 0.000
#> Prog_035 1 0.000
#> Prog_024 2 0.000
#> Prog_006 1 0.000
#> HSPC_053 2 0.000
#> HSPC_077 2 0.000
#> Prog_049 1 0.000
#> Prog_055 2 0.498
#> Prog_061 1 0.000
#> Prog_067 2 0.747
#> Prog_079 1 0.000
#> Prog_043 1 0.502
#> Prog_050 2 0.000
#> Prog_056 2 0.000
#> Prog_051 2 0.000
#> Prog_057 1 0.000
#> Prog_069 2 0.253
#> Prog_075 2 0.000
#> Prog_081 1 0.000
#> Prog_045 1 0.000
#> Prog_058 2 0.000
#> Prog_064 1 0.502
#> Prog_076 2 0.000
#> Prog_082 1 0.000
#> Prog_046 1 0.000
#> Prog_053 1 0.751
#> Prog_059 2 0.000
#> Prog_065 1 0.000
#> Prog_071 2 0.000
#> Prog_077 2 0.000
#> Prog_083 2 0.000
#> Prog_047 2 0.000
#> Prog_066 2 0.000
#> Prog_078 2 0.000
#> Prog_084 1 0.751
#> HSPC_094 2 0.000
#> HSPC_101 2 0.000
#> HSPC_102 2 0.000
#> HSPC_090 2 0.000
#> Prog_091 1 0.000
#> Prog_097 2 0.000
#> Prog_103 2 0.000
#> Prog_115 2 0.000
#> Prog_085 2 0.751
#> Prog_098 1 0.000
#> Prog_110 1 0.000
#> Prog_116 2 0.000
#> LT-HSC_032 1 0.000
#> Prog_093 2 0.000
#> Prog_099 2 0.747
#> Prog_105 2 0.000
#> Prog_111 2 0.000
#> Prog_117 2 1.000
#> Prog_123 2 0.000
#> Prog_087 2 0.000
#> Prog_094 2 0.000
#> Prog_100 1 0.253
#> Prog_112 1 0.000
#> Prog_095 1 0.000
#> Prog_101 1 0.000
#> Prog_107 1 0.000
#> Prog_113 2 0.249
#> Prog_119 1 0.000
#> Prog_089 2 0.249
#> Prog_126 1 0.000
#> Prog_090 1 0.000
#> HSPC_138 2 0.000
#> HSPC_156 2 0.000
#> HSPC_132 1 0.000
#> Prog_133 2 0.751
#> Prog_139 1 0.000
#> Prog_145 2 0.249
#> Prog_157 2 0.751
#> Prog_163 1 0.000
#> LT-HSC_043 1 0.000
#> Prog_140 1 0.000
#> Prog_146 1 0.000
#> Prog_158 1 0.000
#> Prog_128 2 0.000
#> Prog_141 1 0.000
#> Prog_153 2 0.249
#> Prog_129 1 0.000
#> Prog_136 1 0.000
#> Prog_166 2 0.000
#> Prog_130 1 0.000
#> Prog_137 2 1.000
#> Prog_143 1 0.000
#> Prog_155 2 1.000
#> Prog_167 2 0.000
#> Prog_150 1 0.000
#> Prog_168 1 0.000
#> Prog_132 1 0.000
#> HSPC_206 2 0.000
#> HSPC_195 2 0.000
#> LT-HSC_052 2 0.000
#> HSPC_172 2 0.000
#> HSPC_179 2 0.502
#> LT-HSC_055 2 1.000
#> Prog_176 2 0.000
#> Prog_188 2 0.000
#> Prog_206 2 0.000
#> LT-HSC_056 1 0.000
#> Prog_170 1 0.000
#> Prog_183 2 1.000
#> Prog_189 2 0.000
#> Prog_207 2 0.000
#> Prog_178 1 0.000
#> Prog_184 1 0.502
#> Prog_190 2 0.000
#> Prog_196 1 0.000
#> Prog_172 2 0.249
#> Prog_179 1 0.000
#> Prog_185 1 0.000
#> Prog_197 1 0.000
#> Prog_203 1 0.249
#> Prog_209 1 0.000
#> Prog_186 2 0.000
#> Prog_192 2 0.751
#> LT-HSC_060 1 0.000
#> LT-HSC_064 1 0.498
#> HSPC_214 2 0.000
#> HSPC_216 2 0.000
#> Prog_217 1 0.000
#> Prog_229 1 0.000
#> Prog_211 1 0.502
#> Prog_218 2 0.751
#> Prog_224 1 0.000
#> Prog_236 2 0.253
#> Prog_242 2 0.000
#> LT-HSC_068 2 0.751
#> Prog_212 1 0.253
#> Prog_231 1 0.000
#> Prog_243 1 1.000
#> Prog_249 1 0.000
#> Prog_238 2 0.000
#> Prog_250 2 0.000
#> Prog_221 1 0.000
#> Prog_227 1 0.498
#> Prog_233 2 1.000
#> Prog_239 1 0.000
#> Prog_245 2 0.000
#> Prog_215 1 0.000
#> Prog_228 1 0.000
#> Prog_234 2 0.000
#> Prog_240 2 0.000
#> LT-HSC_072 2 0.253
#> Prog_216 1 0.000
#> HSPC_261 2 1.000
#> HSPC_285 2 0.000
#> HSPC_268 2 0.000
#> HSPC_256 1 0.000
#> HSPC_269 1 0.498
#> HSPC_275 1 0.000
#> HSPC_282 2 0.000
#> HSPC_288 2 0.000
#> HSPC_258 2 0.249
#> Prog_265 1 1.000
#> Prog_253 2 0.249
#> Prog_260 2 0.000
#> Prog_266 2 0.502
#> Prog_272 2 0.000
#> Prog_278 1 0.000
#> Prog_284 2 0.000
#> Prog_290 1 0.000
#> Prog_254 1 0.000
#> Prog_261 2 0.249
#> Prog_267 1 0.000
#> Prog_273 1 0.000
#> Prog_279 1 0.000
#> Prog_285 1 0.502
#> LT-HSC_081 2 0.000
#> Prog_255 2 0.000
#> Prog_262 2 0.000
#> Prog_268 2 0.000
#> Prog_274 2 0.000
#> Prog_286 1 0.000
#> Prog_292 2 0.000
#> Prog_263 1 0.000
#> Prog_269 1 0.000
#> Prog_275 2 0.000
#> Prog_281 2 0.000
#> Prog_287 1 0.249
#> Prog_270 1 0.000
#> Prog_276 2 0.000
#> Prog_282 1 0.000
#> Prog_288 1 0.000
#> Prog_294 2 0.000
#> Prog_258 1 0.000
#> HSPC_332 2 0.000
#> HSPC_303 2 0.000
#> HSPC_327 2 0.000
#> HSPC_333 2 0.000
#> HSPC_300 2 0.000
#> Prog_319 1 0.000
#> Prog_325 2 0.000
#> Prog_331 2 0.000
#> LT-HSC_091 1 0.000
#> Prog_308 2 0.000
#> Prog_320 2 0.000
#> Prog_326 1 0.000
#> Prog_332 2 0.249
#> Prog_296 2 0.253
#> Prog_327 2 0.000
#> Prog_304 2 0.000
#> Prog_334 2 0.000
#> Prog_298 2 0.000
#> LT-HSC_095 1 0.000
#> Prog_299 1 0.502
#> Prog_312 1 0.000
#> Prog_318 1 0.000
#> Prog_324 1 0.000
#> Prog_330 2 1.000
#> Prog_336 1 0.000
#> LT-HSC_096 2 0.000
#> Prog_300 1 0.000
#> HSPC_343 1 0.000
#> LT-HSC_098 1 0.000
#> HSPC_338 1 0.000
#> HSPC_346 2 0.000
#> HSPC_370 1 0.000
#> LT-HSC_100 1 0.000
#> HSPC_353 2 0.747
#> HSPC_371 2 0.000
#> HSPC_341 2 0.000
#> LT-HSC_102 1 0.000
#> HSPC_342 1 0.000
#> Prog_343 2 1.000
#> Prog_361 1 0.253
#> Prog_367 1 0.000
#> Prog_373 1 0.000
#> LT-HSC_103 2 0.751
#> Prog_337 1 0.000
#> Prog_350 2 0.498
#> Prog_356 1 0.000
#> Prog_368 2 0.747
#> Prog_374 1 0.253
#> Prog_338 2 0.498
#> Prog_351 2 0.249
#> Prog_357 1 0.000
#> Prog_363 2 0.000
#> Prog_375 1 0.000
#> Prog_339 1 0.000
#> Prog_346 1 0.000
#> Prog_352 1 0.000
#> Prog_364 1 0.000
#> Prog_376 1 0.000
#> Prog_340 2 0.249
#> Prog_353 2 0.751
#> Prog_359 1 0.000
#> Prog_371 2 0.498
#> Prog_377 1 0.000
#> Prog_341 2 0.000
#> Prog_360 1 0.000
#> Prog_366 1 0.000
#> Prog_372 1 0.000
#> LT-HSC_108 2 0.249
#> Prog_342 1 0.000
#> HSPC_404 1 0.000
#> HSPC_410 2 0.000
#> HSPC_411 2 0.747
#> HSPC_417 2 0.253
#> HSPC_423 2 0.000
#> HSPC_388 2 0.249
#> HSPC_412 1 0.000
#> HSPC_382 2 0.502
#> HSPC_389 2 0.747
#> HSPC_407 1 0.000
#> HSPC_419 1 0.000
#> HSPC_408 1 0.000
#> HSPC_420 2 0.751
#> Prog_385 1 0.000
#> Prog_397 1 0.000
#> Prog_403 1 0.000
#> Prog_409 1 0.000
#> Prog_415 1 0.000
#> Prog_421 1 0.000
#> Prog_379 1 0.000
#> Prog_386 1 0.000
#> Prog_392 2 0.502
#> Prog_398 1 0.000
#> Prog_404 1 0.000
#> Prog_410 1 0.000
#> Prog_416 1 0.000
#> Prog_380 1 0.000
#> Prog_387 1 0.000
#> Prog_393 1 0.000
#> Prog_399 2 0.000
#> Prog_405 2 0.000
#> Prog_381 1 0.000
#> Prog_388 1 0.000
#> Prog_406 1 0.253
#> Prog_412 2 0.000
#> Prog_418 1 1.000
#> Prog_424 1 0.000
#> Prog_389 2 1.000
#> Prog_395 1 0.000
#> Prog_401 1 0.000
#> Prog_413 2 1.000
#> Prog_419 1 0.000
#> Prog_425 2 0.000
#> Prog_383 1 0.000
#> Prog_396 2 0.249
#> Prog_408 2 0.249
#> Prog_414 2 1.000
#> Prog_420 2 1.000
#> Prog_426 2 0.747
#> HSPC_436 1 0.000
#> HSPC_442 2 0.498
#> HSPC_454 2 1.000
#> HSPC_456 2 0.000
#> Prog_451 2 1.000
#> Prog_457 2 0.249
#> LT-HSC_115 2 1.000
#> Prog_434 1 0.000
#> Prog_428 2 0.000
#> Prog_441 2 1.000
#> Prog_447 2 0.000
#> Prog_453 2 0.000
#> Prog_429 1 0.000
#> Prog_436 2 0.502
#> Prog_430 1 0.000
#> Prog_437 1 0.000
#> Prog_443 1 0.000
#> Prog_449 1 0.000
#> Prog_444 1 0.000
#> Prog_450 2 0.000
#> Prog_456 2 0.000
#> HSPC_477 2 0.000
#> HSPC_508 1 0.000
#> HSPC_485 2 0.253
#> HSPC_503 2 0.000
#> Prog_475 1 0.249
#> Prog_487 1 0.000
#> Prog_493 2 1.000
#> Prog_499 2 0.498
#> Prog_505 1 0.000
#> Prog_476 2 0.000
#> Prog_482 2 0.747
#> Prog_488 1 0.000
#> Prog_500 1 0.000
#> Prog_506 2 0.000
#> Prog_470 2 1.000
#> Prog_477 1 0.000
#> Prog_489 2 0.000
#> Prog_501 2 0.000
#> Prog_471 2 0.253
#> Prog_478 1 0.000
#> Prog_484 2 0.000
#> Prog_502 1 0.000
#> Prog_508 1 0.000
#> LT-HSC_130 2 0.502
#> Prog_479 2 0.249
#> Prog_485 1 0.000
#> Prog_491 1 0.000
#> Prog_473 2 0.249
#> Prog_486 2 0.498
#> Prog_504 2 0.498
#> LT-HSC_132 1 0.751
#> HSPC_544 2 0.000
#> HSPC_527 2 1.000
#> Prog_523 1 0.000
#> Prog_529 1 0.000
#> Prog_535 1 0.000
#> Prog_541 1 0.000
#> Prog_547 1 0.000
#> Prog_530 2 0.000
#> Prog_536 1 0.000
#> Prog_548 1 0.000
#> Prog_531 2 1.000
#> Prog_543 2 0.502
#> Prog_520 1 0.000
#> Prog_550 2 0.249
#> LT-HSC_142 2 0.000
#> Prog_514 2 0.249
#> Prog_521 2 0.502
#> Prog_527 2 0.000
#> Prog_545 1 0.502
#> Prog_551 2 1.000
#> LT-HSC_143 2 1.000
#> Prog_528 2 0.253
#> Prog_516 1 0.000
#> HSPC_553 1 0.249
#> HSPC_574 2 0.000
#> Prog_559 2 0.000
#> Prog_565 2 0.502
#> Prog_571 2 0.000
#> Prog_577 2 0.751
#> Prog_560 2 0.498
#> Prog_566 2 0.000
#> Prog_584 2 0.502
#> Prog_590 2 0.249
#> Prog_567 2 0.249
#> Prog_579 2 0.000
#> Prog_562 1 0.000
#> Prog_574 2 0.000
#> Prog_592 1 0.000
#> Prog_569 1 0.249
#> Prog_575 1 0.000
#> Prog_581 2 0.249
#> Prog_587 1 0.000
#> Prog_593 2 0.751
#> Prog_557 2 0.000
#> Prog_576 2 0.000
#> Prog_582 2 0.498
#> LT-HSC_156 2 0.502
#> Prog_607 2 1.000
#> Prog_602 2 1.000
#> Prog_608 1 0.502
#> Prog_614 2 0.502
#> Prog_626 2 0.000
#> Prog_632 2 0.000
#> Prog_603 1 0.000
#> Prog_609 2 0.000
#> Prog_621 2 0.000
#> Prog_616 1 0.000
#> Prog_622 2 0.000
#> Prog_628 2 0.249
#> Prog_598 2 1.000
#> Prog_605 1 1.000
#> Prog_623 1 0.000
#> Prog_629 2 0.000
#> Prog_599 2 0.000
#> Prog_612 1 0.000
#> Prog_618 2 0.498
#> Prog_624 2 0.249
#> Prog_630 1 0.000
#> LT-HSC_168 1 0.000
#> Prog_600 2 0.000
#> HSPC_644 2 0.498
#> HSPC_638 2 1.000
#> Prog_649 1 0.000
#> Prog_655 1 0.000
#> Prog_661 1 1.000
#> Prog_637 1 0.751
#> Prog_650 2 0.000
#> Prog_638 1 0.000
#> Prog_657 1 0.000
#> Prog_663 1 1.000
#> Prog_675 2 0.000
#> Prog_639 2 0.000
#> Prog_646 2 0.000
#> Prog_652 2 0.000
#> Prog_658 2 0.000
#> Prog_670 2 0.000
#> Prog_640 1 0.000
#> Prog_677 1 0.253
#> Prog_654 2 1.000
#> HSPC_705 2 0.000
#> HSPC_682 2 0.000
#> HSPC_695 1 0.000
#> HSPC_720 2 0.000
#> Prog_685 2 0.751
#> Prog_697 1 0.000
#> Prog_709 1 0.502
#> Prog_715 2 0.000
#> Prog_679 2 0.000
#> Prog_698 1 0.249
#> Prog_680 2 0.498
#> Prog_687 2 0.253
#> Prog_693 2 0.000
#> Prog_699 2 0.000
#> Prog_705 2 0.000
#> Prog_717 2 0.502
#> Prog_681 2 1.000
#> Prog_688 1 0.000
#> Prog_700 1 0.000
#> Prog_706 1 0.000
#> Prog_712 1 0.249
#> Prog_718 2 0.000
#> Prog_682 1 0.000
#> Prog_695 1 0.000
#> Prog_701 1 0.000
#> Prog_713 1 0.000
#> Prog_719 1 0.751
#> Prog_702 2 0.000
#> Prog_708 2 0.000
#> Prog_714 1 1.000
#> Prog_720 1 1.000
#> LT-HSC_192 2 0.000
#> HSPC_734 2 0.000
#> HSPC_737 2 0.000
#> Prog_727 2 0.000
#> Prog_721 2 0.000
#> Prog_734 2 0.000
#> Prog_722 2 0.000
#> Prog_735 2 0.000
#> Prog_753 1 0.000
#> Prog_759 2 0.000
#> Prog_723 1 0.000
#> Prog_730 1 0.253
#> Prog_736 1 0.000
#> Prog_754 1 0.498
#> Prog_760 2 0.000
#> Prog_731 1 0.502
#> Prog_743 2 0.000
#> HSPC_796 2 0.751
#> HSPC_766 2 0.000
#> HSPC_767 2 0.751
#> Prog_769 2 0.000
#> Prog_781 2 0.000
#> Prog_793 2 1.000
#> Prog_763 2 0.000
#> Prog_770 2 0.000
#> Prog_776 1 0.000
#> Prog_782 2 0.000
#> Prog_788 1 0.000
#> Prog_794 2 0.498
#> Prog_800 2 0.000
#> Prog_764 2 0.000
#> Prog_771 2 0.000
#> Prog_777 2 0.000
#> Prog_783 2 0.000
#> Prog_789 2 0.000
#> Prog_795 2 0.000
#> Prog_801 1 0.000
#> Prog_765 1 0.000
#> Prog_772 2 0.000
#> Prog_790 1 0.000
#> Prog_802 2 0.000
#> Prog_779 1 0.000
#> Prog_791 2 0.000
#> Prog_767 1 0.000
#> Prog_774 2 0.000
#> Prog_780 1 0.000
#> Prog_786 1 0.000
#> Prog_792 1 1.000
#> Prog_798 1 0.249
#> Prog_804 2 0.000
#> Prog_768 2 0.000
#> HSPC_812 2 0.000
#> HSPC_813 2 0.000
#> HSPC_807 2 0.000
#> HSPC_820 2 0.253
#> HSPC_808 2 0.000
#> HSPC_833 2 0.000
#> Prog_811 2 0.000
#> Prog_817 2 1.000
#> Prog_829 2 0.000
#> Prog_835 2 0.000
#> Prog_847 2 0.000
#> Prog_818 2 0.000
#> Prog_824 2 0.000
#> Prog_830 1 0.000
#> Prog_836 1 0.000
#> Prog_842 1 0.253
#> Prog_813 1 0.751
#> Prog_819 1 1.000
#> Prog_825 1 0.000
#> Prog_831 2 0.000
#> Prog_837 2 0.000
#> Prog_843 1 1.000
#> Prog_807 2 0.000
#> Prog_814 1 0.000
#> Prog_820 1 0.751
#> Prog_826 1 0.249
#> Prog_832 2 0.000
#> Prog_838 1 0.000
#> Prog_844 2 0.000
#> Prog_850 2 0.000
#> Prog_808 2 0.000
#> Prog_815 2 0.000
#> Prog_821 1 0.000
#> Prog_833 2 0.000
#> Prog_839 1 0.000
#> Prog_845 1 0.000
#> Prog_809 1 1.000
#> Prog_816 2 0.000
#> Prog_822 1 0.000
#> Prog_828 1 0.249
#> Prog_834 2 0.000
#> Prog_840 2 0.000
#> Prog_846 2 0.000
#> Prog_810 1 0.000
get_classes(res, k = 3)
#> class p
#> HSPC_001 2 0.249
#> HSPC_003 2 0.000
#> HSPC_016 2 0.000
#> HSPC_034 2 0.000
#> HSPC_036 2 0.000
#> Prog_007 2 0.000
#> Prog_013 2 1.000
#> Prog_019 3 0.000
#> Prog_008 1 0.000
#> Prog_014 1 0.000
#> Prog_020 2 0.000
#> Prog_032 1 0.000
#> Prog_038 1 0.000
#> Prog_002 2 0.000
#> Prog_009 1 0.000
#> Prog_015 2 0.000
#> Prog_021 1 1.000
#> Prog_027 2 0.000
#> Prog_033 1 0.000
#> Prog_039 1 0.000
#> Prog_003 2 0.000
#> Prog_028 1 0.000
#> Prog_011 2 1.000
#> Prog_017 2 0.000
#> Prog_023 2 0.000
#> Prog_029 2 1.000
#> Prog_035 1 0.000
#> Prog_024 2 1.000
#> Prog_006 1 0.000
#> HSPC_053 2 0.000
#> HSPC_077 2 0.249
#> Prog_049 1 0.000
#> Prog_055 2 0.000
#> Prog_061 1 0.000
#> Prog_067 1 0.000
#> Prog_079 1 0.000
#> Prog_043 1 1.000
#> Prog_050 2 1.000
#> Prog_056 2 0.000
#> Prog_051 1 0.000
#> Prog_057 3 0.000
#> Prog_069 2 0.000
#> Prog_075 2 0.253
#> Prog_081 1 0.000
#> Prog_045 3 1.000
#> Prog_058 1 0.000
#> Prog_064 1 0.000
#> Prog_076 1 0.000
#> Prog_082 1 0.000
#> Prog_046 1 0.000
#> Prog_053 1 0.000
#> Prog_059 2 0.000
#> Prog_065 3 0.000
#> Prog_071 2 0.000
#> Prog_077 2 0.000
#> Prog_083 2 0.000
#> Prog_047 2 0.000
#> Prog_066 2 0.000
#> Prog_078 2 0.000
#> Prog_084 1 0.000
#> HSPC_094 2 0.000
#> HSPC_101 2 0.000
#> HSPC_102 2 0.000
#> HSPC_090 2 0.000
#> Prog_091 1 0.000
#> Prog_097 2 0.000
#> Prog_103 2 0.000
#> Prog_115 2 1.000
#> Prog_085 2 0.000
#> Prog_098 1 0.000
#> Prog_110 1 0.000
#> Prog_116 2 0.000
#> LT-HSC_032 1 0.000
#> Prog_093 2 0.000
#> Prog_099 2 0.253
#> Prog_105 2 0.000
#> Prog_111 2 1.000
#> Prog_117 2 1.000
#> Prog_123 2 0.000
#> Prog_087 2 0.000
#> Prog_094 1 0.000
#> Prog_100 1 0.000
#> Prog_112 1 0.000
#> Prog_095 1 0.000
#> Prog_101 3 0.000
#> Prog_107 1 0.000
#> Prog_113 2 0.000
#> Prog_119 1 0.000
#> Prog_089 1 0.000
#> Prog_126 1 0.000
#> Prog_090 1 0.000
#> HSPC_138 2 0.000
#> HSPC_156 2 0.000
#> HSPC_132 3 0.000
#> Prog_133 2 1.000
#> Prog_139 1 0.000
#> Prog_145 2 0.249
#> Prog_157 2 0.000
#> Prog_163 3 1.000
#> LT-HSC_043 3 0.000
#> Prog_140 1 0.000
#> Prog_146 1 0.000
#> Prog_158 1 0.000
#> Prog_128 2 0.000
#> Prog_141 3 0.000
#> Prog_153 2 0.000
#> Prog_129 3 0.000
#> Prog_136 3 0.000
#> Prog_166 1 0.000
#> Prog_130 3 0.000
#> Prog_137 2 0.502
#> Prog_143 3 0.000
#> Prog_155 2 0.000
#> Prog_167 2 1.000
#> Prog_150 3 0.000
#> Prog_168 3 0.000
#> Prog_132 3 0.000
#> HSPC_206 2 0.000
#> HSPC_195 2 0.000
#> LT-HSC_052 2 0.000
#> HSPC_172 2 0.000
#> HSPC_179 2 0.000
#> LT-HSC_055 2 1.000
#> Prog_176 2 1.000
#> Prog_188 2 1.000
#> Prog_206 2 0.000
#> LT-HSC_056 3 0.000
#> Prog_170 1 0.000
#> Prog_183 3 1.000
#> Prog_189 2 0.000
#> Prog_207 2 0.498
#> Prog_178 1 0.000
#> Prog_184 3 0.000
#> Prog_190 2 0.000
#> Prog_196 1 0.000
#> Prog_172 1 0.000
#> Prog_179 3 0.000
#> Prog_185 1 0.000
#> Prog_197 3 0.000
#> Prog_203 3 0.000
#> Prog_209 3 0.000
#> Prog_186 2 0.000
#> Prog_192 2 1.000
#> LT-HSC_060 3 0.000
#> LT-HSC_064 1 0.000
#> HSPC_214 2 0.000
#> HSPC_216 2 0.000
#> Prog_217 1 0.000
#> Prog_229 1 0.000
#> Prog_211 1 0.000
#> Prog_218 2 0.000
#> Prog_224 3 0.000
#> Prog_236 2 0.253
#> Prog_242 2 0.000
#> LT-HSC_068 2 1.000
#> Prog_212 1 0.000
#> Prog_231 3 0.000
#> Prog_243 3 0.000
#> Prog_249 1 0.000
#> Prog_238 2 0.000
#> Prog_250 1 0.249
#> Prog_221 1 0.000
#> Prog_227 3 0.000
#> Prog_233 2 0.000
#> Prog_239 1 0.000
#> Prog_245 2 0.000
#> Prog_215 1 0.000
#> Prog_228 3 0.000
#> Prog_234 2 0.000
#> Prog_240 2 0.000
#> LT-HSC_072 2 0.751
#> Prog_216 1 0.000
#> HSPC_261 3 0.502
#> HSPC_285 2 0.000
#> HSPC_268 2 0.000
#> HSPC_256 1 0.000
#> HSPC_269 3 0.000
#> HSPC_275 3 0.000
#> HSPC_282 2 0.249
#> HSPC_288 2 0.000
#> HSPC_258 2 0.000
#> Prog_265 1 0.000
#> Prog_253 2 0.000
#> Prog_260 2 0.000
#> Prog_266 2 0.751
#> Prog_272 2 0.000
#> Prog_278 1 0.000
#> Prog_284 2 1.000
#> Prog_290 1 0.000
#> Prog_254 1 0.000
#> Prog_261 1 0.000
#> Prog_267 3 0.000
#> Prog_273 3 0.000
#> Prog_279 1 0.000
#> Prog_285 1 0.000
#> LT-HSC_081 2 0.000
#> Prog_255 2 0.000
#> Prog_262 2 0.000
#> Prog_268 2 0.000
#> Prog_274 1 0.000
#> Prog_286 1 0.000
#> Prog_292 2 0.000
#> Prog_263 3 0.000
#> Prog_269 1 0.502
#> Prog_275 2 0.000
#> Prog_281 2 1.000
#> Prog_287 3 0.000
#> Prog_270 3 0.000
#> Prog_276 2 0.000
#> Prog_282 1 0.000
#> Prog_288 1 0.000
#> Prog_294 2 0.000
#> Prog_258 3 0.000
#> HSPC_332 2 0.000
#> HSPC_303 2 0.000
#> HSPC_327 2 0.000
#> HSPC_333 2 0.000
#> HSPC_300 2 0.000
#> Prog_319 3 0.000
#> Prog_325 2 0.000
#> Prog_331 2 0.000
#> LT-HSC_091 1 0.000
#> Prog_308 2 0.000
#> Prog_320 2 0.000
#> Prog_326 1 0.000
#> Prog_332 2 0.000
#> Prog_296 2 0.000
#> Prog_327 2 0.000
#> Prog_304 2 0.000
#> Prog_334 2 0.000
#> Prog_298 2 0.000
#> LT-HSC_095 1 0.000
#> Prog_299 1 0.000
#> Prog_312 1 0.000
#> Prog_318 1 0.000
#> Prog_324 1 0.000
#> Prog_330 2 1.000
#> Prog_336 3 0.000
#> LT-HSC_096 2 0.000
#> Prog_300 3 0.000
#> HSPC_343 3 0.000
#> LT-HSC_098 1 0.000
#> HSPC_338 1 0.000
#> HSPC_346 2 0.000
#> HSPC_370 3 0.000
#> LT-HSC_100 1 0.000
#> HSPC_353 2 1.000
#> HSPC_371 2 0.498
#> HSPC_341 2 0.000
#> LT-HSC_102 1 0.000
#> HSPC_342 3 0.000
#> Prog_343 3 1.000
#> Prog_361 1 0.000
#> Prog_367 3 0.000
#> Prog_373 1 0.000
#> LT-HSC_103 3 0.000
#> Prog_337 1 0.000
#> Prog_350 1 0.000
#> Prog_356 1 0.000
#> Prog_368 1 0.000
#> Prog_374 1 0.000
#> Prog_338 2 0.751
#> Prog_351 1 1.000
#> Prog_357 1 0.000
#> Prog_363 1 0.000
#> Prog_375 1 0.000
#> Prog_339 1 0.000
#> Prog_346 1 0.000
#> Prog_352 1 0.000
#> Prog_364 1 0.000
#> Prog_376 1 0.000
#> Prog_340 2 0.000
#> Prog_353 3 1.000
#> Prog_359 1 0.000
#> Prog_371 2 0.000
#> Prog_377 1 0.000
#> Prog_341 2 0.000
#> Prog_360 1 0.000
#> Prog_366 1 0.000
#> Prog_372 1 0.000
#> LT-HSC_108 2 0.000
#> Prog_342 1 0.000
#> HSPC_404 1 0.000
#> HSPC_410 2 0.000
#> HSPC_411 3 1.000
#> HSPC_417 2 1.000
#> HSPC_423 2 0.000
#> HSPC_388 2 0.000
#> HSPC_412 3 0.000
#> HSPC_382 2 0.000
#> HSPC_389 1 0.000
#> HSPC_407 3 0.000
#> HSPC_419 3 0.000
#> HSPC_408 1 0.000
#> HSPC_420 2 0.249
#> Prog_385 1 0.000
#> Prog_397 1 0.000
#> Prog_403 1 0.000
#> Prog_409 1 0.000
#> Prog_415 1 0.000
#> Prog_421 1 0.000
#> Prog_379 1 0.000
#> Prog_386 1 0.000
#> Prog_392 2 0.000
#> Prog_398 1 0.000
#> Prog_404 1 0.751
#> Prog_410 1 0.000
#> Prog_416 1 0.000
#> Prog_380 1 0.000
#> Prog_387 3 0.000
#> Prog_393 1 0.000
#> Prog_399 2 0.000
#> Prog_405 2 0.000
#> Prog_381 1 0.000
#> Prog_388 1 0.000
#> Prog_406 1 0.000
#> Prog_412 2 0.000
#> Prog_418 1 0.000
#> Prog_424 1 0.000
#> Prog_389 3 0.000
#> Prog_395 1 0.000
#> Prog_401 3 0.000
#> Prog_413 2 1.000
#> Prog_419 1 0.000
#> Prog_425 2 0.000
#> Prog_383 1 0.000
#> Prog_396 2 1.000
#> Prog_408 1 0.000
#> Prog_414 3 0.000
#> Prog_420 2 0.000
#> Prog_426 2 0.000
#> HSPC_436 3 0.000
#> HSPC_442 2 0.253
#> HSPC_454 3 0.000
#> HSPC_456 2 0.249
#> Prog_451 3 0.000
#> Prog_457 1 0.751
#> LT-HSC_115 2 1.000
#> Prog_434 1 0.000
#> Prog_428 2 0.000
#> Prog_441 2 0.000
#> Prog_447 2 0.000
#> Prog_453 2 0.502
#> Prog_429 1 0.000
#> Prog_436 2 0.000
#> Prog_430 1 0.000
#> Prog_437 3 0.000
#> Prog_443 3 0.000
#> Prog_449 1 0.000
#> Prog_444 1 0.000
#> Prog_450 2 0.000
#> Prog_456 2 0.000
#> HSPC_477 2 0.000
#> HSPC_508 3 0.000
#> HSPC_485 2 1.000
#> HSPC_503 2 0.000
#> Prog_475 3 0.000
#> Prog_487 3 0.000
#> Prog_493 2 0.000
#> Prog_499 2 0.502
#> Prog_505 3 0.000
#> Prog_476 2 0.000
#> Prog_482 2 0.000
#> Prog_488 3 0.000
#> Prog_500 3 0.000
#> Prog_506 2 0.000
#> Prog_470 2 1.000
#> Prog_477 1 0.000
#> Prog_489 2 0.751
#> Prog_501 2 0.000
#> Prog_471 2 0.249
#> Prog_478 1 0.000
#> Prog_484 2 0.000
#> Prog_502 1 0.000
#> Prog_508 1 0.000
#> LT-HSC_130 3 1.000
#> Prog_479 2 0.000
#> Prog_485 3 0.000
#> Prog_491 3 0.000
#> Prog_473 2 0.000
#> Prog_486 2 1.000
#> Prog_504 2 0.000
#> LT-HSC_132 1 0.000
#> HSPC_544 2 0.000
#> HSPC_527 2 0.751
#> Prog_523 1 0.000
#> Prog_529 3 0.000
#> Prog_535 1 0.249
#> Prog_541 3 0.000
#> Prog_547 3 0.000
#> Prog_530 2 0.000
#> Prog_536 1 0.000
#> Prog_548 1 0.000
#> Prog_531 3 0.498
#> Prog_543 2 0.000
#> Prog_520 3 0.000
#> Prog_550 2 0.000
#> LT-HSC_142 2 0.000
#> Prog_514 2 0.000
#> Prog_521 2 0.000
#> Prog_527 2 0.000
#> Prog_545 1 0.000
#> Prog_551 2 1.000
#> LT-HSC_143 3 0.249
#> Prog_528 2 0.000
#> Prog_516 1 0.000
#> HSPC_553 3 0.000
#> HSPC_574 2 0.000
#> Prog_559 2 1.000
#> Prog_565 2 0.751
#> Prog_571 2 0.000
#> Prog_577 2 0.000
#> Prog_560 2 1.000
#> Prog_566 2 0.000
#> Prog_584 2 0.000
#> Prog_590 2 0.000
#> Prog_567 2 1.000
#> Prog_579 2 0.000
#> Prog_562 1 0.000
#> Prog_574 2 0.000
#> Prog_592 1 0.000
#> Prog_569 3 0.000
#> Prog_575 1 0.000
#> Prog_581 2 0.498
#> Prog_587 3 0.000
#> Prog_593 2 0.000
#> Prog_557 2 0.000
#> Prog_576 1 0.000
#> Prog_582 2 0.000
#> LT-HSC_156 2 0.000
#> Prog_607 2 1.000
#> Prog_602 3 0.000
#> Prog_608 1 0.000
#> Prog_614 2 1.000
#> Prog_626 2 0.000
#> Prog_632 2 0.000
#> Prog_603 1 0.000
#> Prog_609 2 1.000
#> Prog_621 2 0.000
#> Prog_616 1 0.000
#> Prog_622 2 0.000
#> Prog_628 2 1.000
#> Prog_598 2 1.000
#> Prog_605 1 0.000
#> Prog_623 3 0.000
#> Prog_629 2 0.000
#> Prog_599 2 0.000
#> Prog_612 3 0.000
#> Prog_618 2 0.498
#> Prog_624 2 0.249
#> Prog_630 3 0.000
#> LT-HSC_168 3 0.000
#> Prog_600 2 0.249
#> HSPC_644 3 0.000
#> HSPC_638 2 1.000
#> Prog_649 1 0.000
#> Prog_655 1 0.000
#> Prog_661 3 0.000
#> Prog_637 1 0.000
#> Prog_650 2 0.000
#> Prog_638 1 0.000
#> Prog_657 1 0.000
#> Prog_663 1 0.000
#> Prog_675 2 0.000
#> Prog_639 2 0.000
#> Prog_646 2 0.000
#> Prog_652 2 0.000
#> Prog_658 2 1.000
#> Prog_670 2 0.000
#> Prog_640 1 0.000
#> Prog_677 1 0.000
#> Prog_654 3 0.000
#> HSPC_705 2 0.000
#> HSPC_682 2 0.000
#> HSPC_695 3 0.000
#> HSPC_720 2 0.000
#> Prog_685 2 0.502
#> Prog_697 1 0.000
#> Prog_709 1 0.751
#> Prog_715 2 1.000
#> Prog_679 2 0.000
#> Prog_698 3 0.000
#> Prog_680 2 0.000
#> Prog_687 2 1.000
#> Prog_693 2 0.000
#> Prog_699 2 0.000
#> Prog_705 2 0.000
#> Prog_717 2 1.000
#> Prog_681 3 0.000
#> Prog_688 1 0.000
#> Prog_700 1 0.000
#> Prog_706 3 0.000
#> Prog_712 3 0.000
#> Prog_718 2 0.000
#> Prog_682 3 0.000
#> Prog_695 1 0.000
#> Prog_701 1 0.000
#> Prog_713 3 0.000
#> Prog_719 1 0.000
#> Prog_702 1 0.000
#> Prog_708 1 0.000
#> Prog_714 1 0.000
#> Prog_720 1 0.000
#> LT-HSC_192 2 0.000
#> HSPC_734 2 0.498
#> HSPC_737 2 0.000
#> Prog_727 2 0.000
#> Prog_721 1 0.000
#> Prog_734 2 0.000
#> Prog_722 2 0.000
#> Prog_735 2 0.000
#> Prog_753 3 0.000
#> Prog_759 2 1.000
#> Prog_723 1 0.000
#> Prog_730 1 0.000
#> Prog_736 3 0.000
#> Prog_754 3 0.000
#> Prog_760 2 0.000
#> Prog_731 1 0.000
#> Prog_743 2 0.000
#> HSPC_796 2 1.000
#> HSPC_766 2 0.000
#> HSPC_767 2 1.000
#> Prog_769 2 0.000
#> Prog_781 2 0.000
#> Prog_793 3 1.000
#> Prog_763 2 1.000
#> Prog_770 2 0.751
#> Prog_776 1 0.000
#> Prog_782 2 0.000
#> Prog_788 1 0.000
#> Prog_794 2 0.000
#> Prog_800 2 0.000
#> Prog_764 2 0.000
#> Prog_771 2 0.000
#> Prog_777 2 0.000
#> Prog_783 1 0.000
#> Prog_789 2 0.000
#> Prog_795 2 0.000
#> Prog_801 3 0.000
#> Prog_765 3 0.000
#> Prog_772 2 0.000
#> Prog_790 1 0.000
#> Prog_802 1 0.000
#> Prog_779 3 0.000
#> Prog_791 2 0.000
#> Prog_767 3 1.000
#> Prog_774 2 0.000
#> Prog_780 1 0.000
#> Prog_786 1 0.000
#> Prog_792 3 0.000
#> Prog_798 3 0.000
#> Prog_804 2 0.751
#> Prog_768 2 0.000
#> HSPC_812 2 0.000
#> HSPC_813 2 0.000
#> HSPC_807 2 0.000
#> HSPC_820 2 0.000
#> HSPC_808 2 0.751
#> HSPC_833 2 0.000
#> Prog_811 2 0.000
#> Prog_817 3 0.000
#> Prog_829 2 0.249
#> Prog_835 2 1.000
#> Prog_847 2 0.000
#> Prog_818 2 0.249
#> Prog_824 2 0.000
#> Prog_830 1 0.000
#> Prog_836 3 0.000
#> Prog_842 1 0.000
#> Prog_813 1 0.000
#> Prog_819 1 0.000
#> Prog_825 1 0.000
#> Prog_831 3 1.000
#> Prog_837 1 0.000
#> Prog_843 3 0.000
#> Prog_807 1 0.000
#> Prog_814 1 0.000
#> Prog_820 3 0.000
#> Prog_826 1 0.000
#> Prog_832 2 0.000
#> Prog_838 1 0.000
#> Prog_844 1 0.000
#> Prog_850 2 1.000
#> Prog_808 2 0.000
#> Prog_815 1 0.000
#> Prog_821 1 0.000
#> Prog_833 2 0.000
#> Prog_839 3 0.253
#> Prog_845 3 0.000
#> Prog_809 3 0.000
#> Prog_816 2 0.000
#> Prog_822 1 0.000
#> Prog_828 1 0.000
#> Prog_834 2 1.000
#> Prog_840 2 0.000
#> Prog_846 2 0.000
#> Prog_810 3 0.000
get_classes(res, k = 4)
#> class p
#> HSPC_001 2 0.000
#> HSPC_003 2 0.000
#> HSPC_016 2 0.000
#> HSPC_034 2 0.000
#> HSPC_036 2 0.000
#> Prog_007 2 0.000
#> Prog_013 2 0.000
#> Prog_019 3 0.000
#> Prog_008 1 0.000
#> Prog_014 1 0.000
#> Prog_020 4 0.000
#> Prog_032 4 0.000
#> Prog_038 4 0.000
#> Prog_002 2 1.000
#> Prog_009 1 0.000
#> Prog_015 2 0.000
#> Prog_021 4 0.000
#> Prog_027 2 0.000
#> Prog_033 1 0.249
#> Prog_039 1 0.000
#> Prog_003 2 1.000
#> Prog_028 1 0.000
#> Prog_011 4 0.000
#> Prog_017 2 0.000
#> Prog_023 2 0.000
#> Prog_029 4 0.000
#> Prog_035 1 0.000
#> Prog_024 4 0.000
#> Prog_006 1 0.000
#> HSPC_053 2 0.000
#> HSPC_077 2 0.000
#> Prog_049 1 0.000
#> Prog_055 2 0.000
#> Prog_061 1 0.000
#> Prog_067 4 0.000
#> Prog_079 1 0.000
#> Prog_043 3 1.000
#> Prog_050 2 0.000
#> Prog_056 2 1.000
#> Prog_051 4 0.000
#> Prog_057 3 0.000
#> Prog_069 2 0.000
#> Prog_075 2 0.000
#> Prog_081 1 0.000
#> Prog_045 3 1.000
#> Prog_058 4 0.000
#> Prog_064 4 1.000
#> Prog_076 4 0.000
#> Prog_082 1 0.000
#> Prog_046 1 1.000
#> Prog_053 1 0.498
#> Prog_059 2 0.498
#> Prog_065 3 0.000
#> Prog_071 2 0.000
#> Prog_077 2 1.000
#> Prog_083 2 0.000
#> Prog_047 2 0.000
#> Prog_066 4 1.000
#> Prog_078 4 1.000
#> Prog_084 1 0.000
#> HSPC_094 2 0.000
#> HSPC_101 2 0.000
#> HSPC_102 2 0.000
#> HSPC_090 2 0.000
#> Prog_091 1 0.000
#> Prog_097 2 0.000
#> Prog_103 2 0.000
#> Prog_115 4 0.000
#> Prog_085 2 0.000
#> Prog_098 1 0.000
#> Prog_110 1 0.000
#> Prog_116 2 0.000
#> LT-HSC_032 1 0.000
#> Prog_093 2 0.000
#> Prog_099 2 0.000
#> Prog_105 2 0.000
#> Prog_111 4 0.000
#> Prog_117 3 0.751
#> Prog_123 2 0.000
#> Prog_087 2 0.000
#> Prog_094 4 0.000
#> Prog_100 1 0.000
#> Prog_112 1 0.000
#> Prog_095 1 0.000
#> Prog_101 3 0.000
#> Prog_107 1 0.000
#> Prog_113 2 0.000
#> Prog_119 1 0.000
#> Prog_089 4 0.000
#> Prog_126 4 0.000
#> Prog_090 1 0.000
#> HSPC_138 2 0.000
#> HSPC_156 2 0.000
#> HSPC_132 3 0.000
#> Prog_133 2 0.000
#> Prog_139 1 0.000
#> Prog_145 2 0.000
#> Prog_157 2 0.000
#> Prog_163 1 1.000
#> LT-HSC_043 3 0.000
#> Prog_140 1 0.000
#> Prog_146 1 0.000
#> Prog_158 1 0.000
#> Prog_128 2 0.000
#> Prog_141 3 0.000
#> Prog_153 2 0.000
#> Prog_129 3 0.000
#> Prog_136 3 0.000
#> Prog_166 4 0.000
#> Prog_130 3 0.000
#> Prog_137 2 0.000
#> Prog_143 3 0.000
#> Prog_155 2 0.000
#> Prog_167 2 0.502
#> Prog_150 3 0.000
#> Prog_168 3 0.000
#> Prog_132 3 0.000
#> HSPC_206 2 0.000
#> HSPC_195 2 0.000
#> LT-HSC_052 2 0.000
#> HSPC_172 2 0.000
#> HSPC_179 2 0.000
#> LT-HSC_055 3 1.000
#> Prog_176 2 0.249
#> Prog_188 4 0.000
#> Prog_206 2 0.000
#> LT-HSC_056 3 0.000
#> Prog_170 1 0.000
#> Prog_183 3 0.498
#> Prog_189 2 0.000
#> Prog_207 4 0.000
#> Prog_178 1 0.000
#> Prog_184 3 0.000
#> Prog_190 2 0.000
#> Prog_196 1 0.000
#> Prog_172 4 0.000
#> Prog_179 3 0.000
#> Prog_185 1 0.000
#> Prog_197 3 0.000
#> Prog_203 3 0.000
#> Prog_209 3 0.000
#> Prog_186 2 0.000
#> Prog_192 2 0.000
#> LT-HSC_060 3 0.000
#> LT-HSC_064 1 0.000
#> HSPC_214 2 0.000
#> HSPC_216 2 0.000
#> Prog_217 1 0.000
#> Prog_229 1 0.000
#> Prog_211 1 0.747
#> Prog_218 2 0.000
#> Prog_224 3 0.000
#> Prog_236 2 0.000
#> Prog_242 4 1.000
#> LT-HSC_068 2 0.751
#> Prog_212 4 0.000
#> Prog_231 3 0.000
#> Prog_243 3 0.000
#> Prog_249 1 0.000
#> Prog_238 2 0.000
#> Prog_250 4 0.000
#> Prog_221 1 0.000
#> Prog_227 3 0.000
#> Prog_233 2 0.000
#> Prog_239 1 0.000
#> Prog_245 2 0.000
#> Prog_215 1 0.000
#> Prog_228 3 0.000
#> Prog_234 2 0.000
#> Prog_240 2 0.000
#> LT-HSC_072 2 0.249
#> Prog_216 1 0.000
#> HSPC_261 3 0.000
#> HSPC_285 2 0.000
#> HSPC_268 2 0.000
#> HSPC_256 1 0.000
#> HSPC_269 3 0.000
#> HSPC_275 3 0.000
#> HSPC_282 2 0.000
#> HSPC_288 2 0.000
#> HSPC_258 2 0.000
#> Prog_265 1 0.000
#> Prog_253 4 1.000
#> Prog_260 2 0.000
#> Prog_266 2 0.000
#> Prog_272 2 1.000
#> Prog_278 1 0.000
#> Prog_284 4 0.000
#> Prog_290 1 0.000
#> Prog_254 1 0.747
#> Prog_261 4 0.000
#> Prog_267 3 0.000
#> Prog_273 3 0.000
#> Prog_279 1 0.000
#> Prog_285 4 0.498
#> LT-HSC_081 2 0.000
#> Prog_255 2 0.000
#> Prog_262 2 0.000
#> Prog_268 2 0.000
#> Prog_274 4 0.000
#> Prog_286 1 0.000
#> Prog_292 2 0.000
#> Prog_263 3 0.000
#> Prog_269 1 0.000
#> Prog_275 2 1.000
#> Prog_281 4 0.000
#> Prog_287 3 0.000
#> Prog_270 3 0.000
#> Prog_276 2 0.000
#> Prog_282 1 0.000
#> Prog_288 1 0.000
#> Prog_294 2 0.000
#> Prog_258 3 0.000
#> HSPC_332 2 0.000
#> HSPC_303 2 0.000
#> HSPC_327 2 0.000
#> HSPC_333 2 0.000
#> HSPC_300 2 0.000
#> Prog_319 3 0.000
#> Prog_325 2 0.000
#> Prog_331 2 0.000
#> LT-HSC_091 1 0.000
#> Prog_308 2 0.000
#> Prog_320 2 0.000
#> Prog_326 1 0.000
#> Prog_332 2 0.000
#> Prog_296 2 0.000
#> Prog_327 2 0.000
#> Prog_304 2 0.000
#> Prog_334 4 0.000
#> Prog_298 4 1.000
#> LT-HSC_095 1 0.000
#> Prog_299 1 0.000
#> Prog_312 1 0.000
#> Prog_318 1 0.000
#> Prog_324 1 0.000
#> Prog_330 3 0.000
#> Prog_336 3 0.249
#> LT-HSC_096 2 0.000
#> Prog_300 3 0.000
#> HSPC_343 3 0.000
#> LT-HSC_098 1 0.000
#> HSPC_338 1 0.000
#> HSPC_346 2 0.000
#> HSPC_370 3 0.000
#> LT-HSC_100 1 0.000
#> HSPC_353 2 0.000
#> HSPC_371 2 0.000
#> HSPC_341 2 0.000
#> LT-HSC_102 1 0.000
#> HSPC_342 3 0.000
#> Prog_343 3 0.000
#> Prog_361 4 0.000
#> Prog_367 3 0.000
#> Prog_373 1 0.000
#> LT-HSC_103 3 0.000
#> Prog_337 1 0.000
#> Prog_350 4 0.000
#> Prog_356 1 0.000
#> Prog_368 4 0.000
#> Prog_374 4 0.000
#> Prog_338 2 0.000
#> Prog_351 4 0.000
#> Prog_357 1 0.000
#> Prog_363 4 0.000
#> Prog_375 1 0.000
#> Prog_339 1 0.000
#> Prog_346 4 1.000
#> Prog_352 1 0.000
#> Prog_364 1 0.000
#> Prog_376 1 0.000
#> Prog_340 4 1.000
#> Prog_353 3 0.249
#> Prog_359 1 0.000
#> Prog_371 2 0.000
#> Prog_377 1 0.000
#> Prog_341 2 0.000
#> Prog_360 1 0.000
#> Prog_366 4 0.747
#> Prog_372 1 0.000
#> LT-HSC_108 2 0.000
#> Prog_342 1 0.000
#> HSPC_404 1 0.000
#> HSPC_410 2 0.000
#> HSPC_411 2 1.000
#> HSPC_417 2 1.000
#> HSPC_423 2 0.000
#> HSPC_388 2 0.000
#> HSPC_412 3 0.000
#> HSPC_382 2 0.000
#> HSPC_389 4 0.000
#> HSPC_407 3 0.000
#> HSPC_419 3 0.000
#> HSPC_408 1 0.000
#> HSPC_420 2 0.000
#> Prog_385 1 0.000
#> Prog_397 1 0.000
#> Prog_403 1 0.000
#> Prog_409 1 0.000
#> Prog_415 1 0.000
#> Prog_421 1 0.000
#> Prog_379 1 0.000
#> Prog_386 1 0.000
#> Prog_392 2 0.000
#> Prog_398 1 0.000
#> Prog_404 1 0.000
#> Prog_410 1 0.000
#> Prog_416 1 0.000
#> Prog_380 1 0.000
#> Prog_387 3 0.000
#> Prog_393 1 0.000
#> Prog_399 2 0.000
#> Prog_405 2 1.000
#> Prog_381 1 0.000
#> Prog_388 1 0.000
#> Prog_406 1 0.498
#> Prog_412 2 0.000
#> Prog_418 4 0.000
#> Prog_424 1 0.000
#> Prog_389 3 0.000
#> Prog_395 1 0.000
#> Prog_401 3 0.249
#> Prog_413 2 1.000
#> Prog_419 1 0.000
#> Prog_425 4 0.000
#> Prog_383 1 0.000
#> Prog_396 4 0.000
#> Prog_408 4 0.000
#> Prog_414 3 0.000
#> Prog_420 2 0.000
#> Prog_426 2 0.000
#> HSPC_436 3 0.000
#> HSPC_442 2 0.000
#> HSPC_454 3 0.000
#> HSPC_456 2 0.000
#> Prog_451 3 0.000
#> Prog_457 4 0.000
#> LT-HSC_115 2 0.000
#> Prog_434 1 0.000
#> Prog_428 2 0.000
#> Prog_441 2 0.000
#> Prog_447 2 0.000
#> Prog_453 4 0.000
#> Prog_429 1 0.000
#> Prog_436 2 0.000
#> Prog_430 1 0.000
#> Prog_437 3 0.000
#> Prog_443 3 0.000
#> Prog_449 1 0.000
#> Prog_444 1 0.000
#> Prog_450 2 0.000
#> Prog_456 2 0.000
#> HSPC_477 2 0.000
#> HSPC_508 3 0.000
#> HSPC_485 2 1.000
#> HSPC_503 2 0.000
#> Prog_475 3 0.000
#> Prog_487 3 0.000
#> Prog_493 2 0.000
#> Prog_499 2 0.000
#> Prog_505 3 0.000
#> Prog_476 2 0.000
#> Prog_482 2 0.000
#> Prog_488 3 0.000
#> Prog_500 3 0.000
#> Prog_506 2 0.000
#> Prog_470 2 1.000
#> Prog_477 1 0.000
#> Prog_489 2 0.000
#> Prog_501 2 0.000
#> Prog_471 2 0.000
#> Prog_478 1 0.000
#> Prog_484 2 0.000
#> Prog_502 1 0.000
#> Prog_508 1 0.000
#> LT-HSC_130 3 0.000
#> Prog_479 2 0.000
#> Prog_485 3 0.000
#> Prog_491 3 0.000
#> Prog_473 2 0.000
#> Prog_486 2 0.000
#> Prog_504 2 0.000
#> LT-HSC_132 4 0.000
#> HSPC_544 2 0.000
#> HSPC_527 2 0.000
#> Prog_523 1 0.000
#> Prog_529 3 0.000
#> Prog_535 1 0.498
#> Prog_541 3 0.000
#> Prog_547 3 0.000
#> Prog_530 2 0.000
#> Prog_536 1 0.000
#> Prog_548 1 0.000
#> Prog_531 3 0.502
#> Prog_543 4 0.249
#> Prog_520 3 0.000
#> Prog_550 2 0.000
#> LT-HSC_142 2 0.000
#> Prog_514 2 0.000
#> Prog_521 2 0.000
#> Prog_527 2 0.000
#> Prog_545 4 0.000
#> Prog_551 2 0.502
#> LT-HSC_143 3 0.000
#> Prog_528 4 1.000
#> Prog_516 1 0.000
#> HSPC_553 3 0.000
#> HSPC_574 2 0.000
#> Prog_559 2 0.000
#> Prog_565 2 0.000
#> Prog_571 2 0.249
#> Prog_577 2 0.000
#> Prog_560 2 1.000
#> Prog_566 4 0.498
#> Prog_584 2 0.000
#> Prog_590 2 0.000
#> Prog_567 2 0.000
#> Prog_579 2 0.000
#> Prog_562 1 0.000
#> Prog_574 2 0.000
#> Prog_592 1 0.000
#> Prog_569 3 0.000
#> Prog_575 1 0.000
#> Prog_581 2 0.000
#> Prog_587 3 0.000
#> Prog_593 2 0.000
#> Prog_557 2 0.000
#> Prog_576 4 0.000
#> Prog_582 2 0.000
#> LT-HSC_156 2 0.000
#> Prog_607 2 0.000
#> Prog_602 3 0.000
#> Prog_608 1 0.000
#> Prog_614 3 0.253
#> Prog_626 2 0.000
#> Prog_632 2 1.000
#> Prog_603 1 0.000
#> Prog_609 2 0.751
#> Prog_621 2 0.000
#> Prog_616 1 0.000
#> Prog_622 2 0.000
#> Prog_628 2 0.000
#> Prog_598 2 0.000
#> Prog_605 4 0.000
#> Prog_623 3 0.000
#> Prog_629 2 0.000
#> Prog_599 2 0.000
#> Prog_612 3 0.000
#> Prog_618 2 0.000
#> Prog_624 2 0.000
#> Prog_630 3 0.000
#> LT-HSC_168 3 0.000
#> Prog_600 2 0.000
#> HSPC_644 3 0.000
#> HSPC_638 3 0.747
#> Prog_649 1 0.000
#> Prog_655 1 0.000
#> Prog_661 3 0.000
#> Prog_637 4 1.000
#> Prog_650 2 0.000
#> Prog_638 1 0.000
#> Prog_657 1 0.000
#> Prog_663 1 1.000
#> Prog_675 2 0.000
#> Prog_639 4 1.000
#> Prog_646 2 1.000
#> Prog_652 2 0.000
#> Prog_658 2 0.000
#> Prog_670 2 0.000
#> Prog_640 1 0.000
#> Prog_677 1 0.000
#> Prog_654 3 0.000
#> HSPC_705 2 0.000
#> HSPC_682 2 0.000
#> HSPC_695 3 0.000
#> HSPC_720 2 0.000
#> Prog_685 2 0.000
#> Prog_697 1 0.000
#> Prog_709 4 1.000
#> Prog_715 2 0.000
#> Prog_679 2 0.000
#> Prog_698 3 0.000
#> Prog_680 2 0.000
#> Prog_687 2 0.249
#> Prog_693 2 0.000
#> Prog_699 2 0.000
#> Prog_705 2 0.000
#> Prog_717 2 1.000
#> Prog_681 3 0.000
#> Prog_688 1 0.000
#> Prog_700 1 0.000
#> Prog_706 3 0.000
#> Prog_712 3 0.000
#> Prog_718 2 0.502
#> Prog_682 3 0.000
#> Prog_695 1 0.000
#> Prog_701 1 0.000
#> Prog_713 3 0.751
#> Prog_719 1 0.249
#> Prog_702 4 0.000
#> Prog_708 4 0.000
#> Prog_714 4 0.000
#> Prog_720 4 1.000
#> LT-HSC_192 2 0.000
#> HSPC_734 2 0.000
#> HSPC_737 2 0.000
#> Prog_727 2 0.000
#> Prog_721 4 0.000
#> Prog_734 4 1.000
#> Prog_722 4 1.000
#> Prog_735 2 0.000
#> Prog_753 3 0.000
#> Prog_759 2 0.000
#> Prog_723 1 0.000
#> Prog_730 1 0.000
#> Prog_736 3 0.000
#> Prog_754 3 0.000
#> Prog_760 2 0.000
#> Prog_731 1 1.000
#> Prog_743 2 0.000
#> HSPC_796 2 0.253
#> HSPC_766 2 0.000
#> HSPC_767 2 0.000
#> Prog_769 2 0.000
#> Prog_781 2 0.000
#> Prog_793 3 0.751
#> Prog_763 2 0.000
#> Prog_770 4 0.000
#> Prog_776 1 0.000
#> Prog_782 2 0.000
#> Prog_788 1 0.000
#> Prog_794 2 0.253
#> Prog_800 2 0.000
#> Prog_764 2 0.000
#> Prog_771 4 0.000
#> Prog_777 2 0.000
#> Prog_783 4 0.000
#> Prog_789 2 0.000
#> Prog_795 2 0.000
#> Prog_801 3 0.000
#> Prog_765 3 0.000
#> Prog_772 2 0.000
#> Prog_790 1 0.000
#> Prog_802 4 0.000
#> Prog_779 3 0.000
#> Prog_791 2 0.000
#> Prog_767 1 1.000
#> Prog_774 2 0.000
#> Prog_780 1 0.000
#> Prog_786 1 0.000
#> Prog_792 3 0.000
#> Prog_798 3 0.000
#> Prog_804 2 1.000
#> Prog_768 2 0.000
#> HSPC_812 2 0.000
#> HSPC_813 2 0.000
#> HSPC_807 2 0.000
#> HSPC_820 2 0.000
#> HSPC_808 2 0.000
#> HSPC_833 2 0.000
#> Prog_811 4 0.000
#> Prog_817 3 0.000
#> Prog_829 2 0.000
#> Prog_835 4 0.000
#> Prog_847 2 0.000
#> Prog_818 4 0.000
#> Prog_824 2 0.000
#> Prog_830 1 0.000
#> Prog_836 3 0.000
#> Prog_842 4 1.000
#> Prog_813 1 0.000
#> Prog_819 1 0.000
#> Prog_825 1 0.000
#> Prog_831 4 0.253
#> Prog_837 4 0.000
#> Prog_843 3 0.000
#> Prog_807 4 0.000
#> Prog_814 1 0.000
#> Prog_820 3 0.000
#> Prog_826 1 1.000
#> Prog_832 2 0.000
#> Prog_838 1 0.000
#> Prog_844 4 0.000
#> Prog_850 4 0.000
#> Prog_808 2 0.000
#> Prog_815 4 0.000
#> Prog_821 1 0.000
#> Prog_833 2 0.000
#> Prog_839 3 1.000
#> Prog_845 3 0.000
#> Prog_809 3 0.000
#> Prog_816 2 1.000
#> Prog_822 1 0.000
#> Prog_828 1 0.000
#> Prog_834 2 0.502
#> Prog_840 2 0.000
#> Prog_846 2 0.000
#> Prog_810 3 0.000
Heatmaps for the consensus matrix. It visualizes the probability of two samples to be in a same group.
consensus_heatmap(res, k = 2)
consensus_heatmap(res, k = 3)
consensus_heatmap(res, k = 4)
Heatmaps for the membership of samples in all partitions to see how consistent they are:
membership_heatmap(res, k = 2)
membership_heatmap(res, k = 3)
membership_heatmap(res, k = 4)
As soon as the classes for columns are determined, the signatures that are significantly different between subgroups can be looked for. Following are the heatmaps for signatures.
Signature heatmaps where rows are scaled:
Signature heatmaps where rows are not scaled:
get_signatures(res, k = 2, scale_rows = FALSE)
get_signatures(res, k = 3, scale_rows = FALSE)
get_signatures(res, k = 4, scale_rows = FALSE)
Compare the overlap of signatures from different k:
compare_signatures(res)
get_signature() returns a data frame invisibly. To get the list of signatures, the function
call should be assigned to a variable explicitly. In following code, if plot argument is set
to FALSE, no heatmap is plotted while only the differential analysis is performed.
# code only for demonstration
tb = get_signature(res, k = ..., plot = FALSE)
An example of the output of tb is:
#> which_row fdr mean_1 mean_2 scaled_mean_1 scaled_mean_2 km
#> 1 38 0.042760348 8.373488 9.131774 -0.5533452 0.5164555 1
#> 2 40 0.018707592 7.106213 8.469186 -0.6173731 0.5762149 1
#> 3 55 0.019134737 10.221463 11.207825 -0.6159697 0.5749050 1
#> 4 59 0.006059896 5.921854 7.869574 -0.6899429 0.6439467 1
#> 5 60 0.018055526 8.928898 10.211722 -0.6204761 0.5791110 1
#> 6 98 0.009384629 15.714769 14.887706 0.6635654 -0.6193277 2
...
The columns in tb are:
which_row: row indices corresponding to the input matrix.fdr: FDR for the differential test. mean_x: The mean value in group x.scaled_mean_x: The mean value in group x after rows are scaled.km: Row groups if k-means clustering is applied to rows (which is done by automatically selecting number of clusters).If there are too many signatures, top_signatures = ... can be set to only show the
signatures with the highest FDRs:
# code only for demonstration
# e.g. to show the top 500 most significant rows
tb = get_signature(res, k = ..., top_signatures = 500)
If the signatures are defined as these which are uniquely high in current group, diff_method argument
can be set to "uniquely_high_in_one_group":
# code only for demonstration
tb = get_signature(res, k = ..., diff_method = "uniquely_high_in_one_group")
UMAP plot which shows how samples are separated.
dimension_reduction(res, k = 2, method = "UMAP")
dimension_reduction(res, k = 3, method = "UMAP")
dimension_reduction(res, k = 4, method = "UMAP")
Following heatmap shows how subgroups are split when increasing k:
collect_classes(res)
If matrix rows can be associated to genes, consider to use functional_enrichment(res,
...) to perform function enrichment for the signature genes. See this vignette for more detailed explanations.
Parent node: Node01. Child nodes: Node0111 , Node0112 , Node0121 , Node0122 , Node0131 , Node0132-leaf , Node0141-leaf , Node0142-leaf , Node0211 , Node0212 , Node0213-leaf , Node0311-leaf , Node0312-leaf , Node0321-leaf , Node0322-leaf , Node0331-leaf , Node0332-leaf , Node0411-leaf , Node0412-leaf , Node0413-leaf , Node0421-leaf , Node0422-leaf , Node0423-leaf .
The object with results only for a single top-value method and a single partitioning method can be extracted as:
res = res_rh["011"]
A summary of res and all the functions that can be applied to it:
res
#> A 'ConsensusPartition' object with k = 2, 3, 4.
#> On a matrix with 17974 rows and 154 columns.
#> Top rows (1797) are extracted by 'ATC' method.
#> Subgroups are detected by 'skmeans' method.
#> Performed in total 150 partitions by row resampling.
#> Best k for subgroups seems to be 2.
#>
#> Following methods can be applied to this 'ConsensusPartition' object:
#> [1] "cola_report" "collect_classes" "collect_plots"
#> [4] "collect_stats" "colnames" "compare_partitions"
#> [7] "compare_signatures" "consensus_heatmap" "dimension_reduction"
#> [10] "functional_enrichment" "get_anno_col" "get_anno"
#> [13] "get_classes" "get_consensus" "get_matrix"
#> [16] "get_membership" "get_param" "get_signatures"
#> [19] "get_stats" "is_best_k" "is_stable_k"
#> [22] "membership_heatmap" "ncol" "nrow"
#> [25] "plot_ecdf" "predict_classes" "rownames"
#> [28] "select_partition_number" "show" "suggest_best_k"
#> [31] "test_to_known_factors" "top_rows_heatmap"
collect_plots() function collects all the plots made from res for all k (number of subgroups)
into one single page to provide an easy and fast comparison between different k.
collect_plots(res)
The plots are:
k and the heatmap of
predicted classes for each k.k.k.k.All the plots in panels can be made by individual functions and they are plotted later in this section.
select_partition_number() produces several plots showing different
statistics for choosing “optimized” k. There are following statistics:
k;k, the area increased is defined as \(A_k - A_{k-1}\).The detailed explanations of these statistics can be found in the cola vignette.
Generally speaking, higher 1-PAC score, higher mean silhouette score or higher
concordance corresponds to better partition. Rand index and Jaccard index
measure how similar the current partition is compared to partition with k-1.
If they are too similar, we won't accept k is better than k-1.
select_partition_number(res)
The numeric values for all these statistics can be obtained by get_stats().
get_stats(res)
#> k 1-PAC mean_silhouette concordance area_increased Rand Jaccard
#> 2 2 1.000 0.986 0.994 0.5017 0.499 0.499
#> 3 3 0.785 0.799 0.919 0.2734 0.805 0.628
#> 4 4 0.870 0.856 0.939 0.0802 0.816 0.570
suggest_best_k() suggests the best \(k\) based on these statistics. The rules are as follows:
suggest_best_k(res)
#> [1] 2
Following is the table of the partitions (You need to click the show/hide
code output link to see it). The membership matrix (columns with name p*)
is inferred by
clue::cl_consensus()
function with the SE method. Basically the value in the membership matrix
represents the probability to belong to a certain group. The finall subgroup
label for an item is determined with the group with highest probability it
belongs to.
In get_classes() function, the entropy is calculated from the membership
matrix and the silhouette score is calculated from the consensus matrix.
cbind(get_classes(res, k = 2), get_membership(res, k = 2))
#> class entropy silhouette p1 p2
#> Prog_008 1 0.000 0.993 1.00 0.00
#> Prog_014 2 0.000 0.994 0.00 1.00
#> Prog_009 1 0.000 0.993 1.00 0.00
#> Prog_033 2 0.000 0.994 0.00 1.00
#> Prog_039 1 0.000 0.993 1.00 0.00
#> Prog_028 2 0.000 0.994 0.00 1.00
#> Prog_035 1 0.000 0.993 1.00 0.00
#> Prog_006 1 0.000 0.993 1.00 0.00
#> Prog_049 1 0.000 0.993 1.00 0.00
#> Prog_061 2 0.000 0.994 0.00 1.00
#> Prog_079 1 0.000 0.993 1.00 0.00
#> Prog_081 1 0.000 0.993 1.00 0.00
#> Prog_082 1 0.000 0.993 1.00 0.00
#> Prog_046 2 0.000 0.994 0.00 1.00
#> Prog_053 2 0.000 0.994 0.00 1.00
#> Prog_084 2 0.000 0.994 0.00 1.00
#> Prog_091 1 0.000 0.993 1.00 0.00
#> Prog_098 2 0.680 0.781 0.18 0.82
#> Prog_110 1 0.000 0.993 1.00 0.00
#> LT-HSC_032 1 0.000 0.993 1.00 0.00
#> Prog_100 2 0.000 0.994 0.00 1.00
#> Prog_112 1 0.000 0.993 1.00 0.00
#> Prog_095 2 0.000 0.994 0.00 1.00
#> Prog_107 1 0.000 0.993 1.00 0.00
#> Prog_119 1 0.000 0.993 1.00 0.00
#> Prog_090 2 0.000 0.994 0.00 1.00
#> Prog_139 2 0.000 0.994 0.00 1.00
#> Prog_163 1 0.000 0.993 1.00 0.00
#> Prog_140 1 0.000 0.993 1.00 0.00
#> Prog_146 1 0.000 0.993 1.00 0.00
#> Prog_158 1 0.000 0.993 1.00 0.00
#> Prog_170 1 0.000 0.993 1.00 0.00
#> Prog_178 2 0.000 0.994 0.00 1.00
#> Prog_196 1 0.000 0.993 1.00 0.00
#> Prog_185 1 0.000 0.993 1.00 0.00
#> LT-HSC_064 2 0.000 0.994 0.00 1.00
#> Prog_217 1 0.000 0.993 1.00 0.00
#> Prog_229 1 0.000 0.993 1.00 0.00
#> Prog_211 2 0.000 0.994 0.00 1.00
#> Prog_249 1 0.000 0.993 1.00 0.00
#> Prog_221 1 0.000 0.993 1.00 0.00
#> Prog_239 1 0.000 0.993 1.00 0.00
#> Prog_215 1 0.000 0.993 1.00 0.00
#> Prog_216 1 0.000 0.993 1.00 0.00
#> HSPC_256 2 0.000 0.994 0.00 1.00
#> Prog_265 2 0.000 0.994 0.00 1.00
#> Prog_278 2 0.000 0.994 0.00 1.00
#> Prog_290 2 0.000 0.994 0.00 1.00
#> Prog_254 2 0.000 0.994 0.00 1.00
#> Prog_279 1 0.000 0.993 1.00 0.00
#> Prog_286 2 0.000 0.994 0.00 1.00
#> Prog_269 2 0.000 0.994 0.00 1.00
#> Prog_282 1 0.000 0.993 1.00 0.00
#> Prog_288 2 0.000 0.994 0.00 1.00
#> LT-HSC_091 1 0.000 0.993 1.00 0.00
#> Prog_326 1 0.000 0.993 1.00 0.00
#> LT-HSC_095 1 0.000 0.993 1.00 0.00
#> Prog_299 2 0.000 0.994 0.00 1.00
#> Prog_312 1 0.000 0.993 1.00 0.00
#> Prog_318 1 0.000 0.993 1.00 0.00
#> Prog_324 2 0.000 0.994 0.00 1.00
#> LT-HSC_098 2 0.000 0.994 0.00 1.00
#> HSPC_338 1 0.000 0.993 1.00 0.00
#> LT-HSC_100 1 0.000 0.993 1.00 0.00
#> LT-HSC_102 1 0.000 0.993 1.00 0.00
#> Prog_373 1 0.000 0.993 1.00 0.00
#> Prog_337 1 0.000 0.993 1.00 0.00
#> Prog_356 2 0.000 0.994 0.00 1.00
#> Prog_357 1 0.000 0.993 1.00 0.00
#> Prog_375 1 0.000 0.993 1.00 0.00
#> Prog_339 2 0.000 0.994 0.00 1.00
#> Prog_352 1 0.000 0.993 1.00 0.00
#> Prog_364 2 0.242 0.955 0.04 0.96
#> Prog_376 2 0.000 0.994 0.00 1.00
#> Prog_359 2 0.000 0.994 0.00 1.00
#> Prog_377 1 0.000 0.993 1.00 0.00
#> Prog_360 1 0.000 0.993 1.00 0.00
#> Prog_372 2 0.000 0.994 0.00 1.00
#> Prog_342 1 0.000 0.993 1.00 0.00
#> HSPC_404 2 0.000 0.994 0.00 1.00
#> HSPC_408 1 0.000 0.993 1.00 0.00
#> Prog_385 1 0.000 0.993 1.00 0.00
#> Prog_397 1 0.000 0.993 1.00 0.00
#> Prog_403 2 0.000 0.994 0.00 1.00
#> Prog_409 1 0.000 0.993 1.00 0.00
#> Prog_415 1 0.000 0.993 1.00 0.00
#> Prog_421 1 0.000 0.993 1.00 0.00
#> Prog_379 2 0.000 0.994 0.00 1.00
#> Prog_386 1 0.000 0.993 1.00 0.00
#> Prog_398 1 0.000 0.993 1.00 0.00
#> Prog_404 1 0.000 0.993 1.00 0.00
#> Prog_410 2 0.000 0.994 0.00 1.00
#> Prog_416 2 0.000 0.994 0.00 1.00
#> Prog_380 2 0.000 0.994 0.00 1.00
#> Prog_393 2 0.000 0.994 0.00 1.00
#> Prog_381 2 0.000 0.994 0.00 1.00
#> Prog_388 1 0.000 0.993 1.00 0.00
#> Prog_406 2 0.000 0.994 0.00 1.00
#> Prog_424 2 0.000 0.994 0.00 1.00
#> Prog_395 1 0.000 0.993 1.00 0.00
#> Prog_419 1 0.000 0.993 1.00 0.00
#> Prog_383 1 0.000 0.993 1.00 0.00
#> Prog_434 1 0.000 0.993 1.00 0.00
#> Prog_429 1 0.000 0.993 1.00 0.00
#> Prog_430 2 0.000 0.994 0.00 1.00
#> Prog_449 1 0.000 0.993 1.00 0.00
#> Prog_444 1 0.000 0.993 1.00 0.00
#> Prog_477 2 0.000 0.994 0.00 1.00
#> Prog_478 1 0.000 0.993 1.00 0.00
#> Prog_502 2 0.000 0.994 0.00 1.00
#> Prog_508 1 0.000 0.993 1.00 0.00
#> Prog_523 2 0.000 0.994 0.00 1.00
#> Prog_535 2 0.000 0.994 0.00 1.00
#> Prog_536 2 0.000 0.994 0.00 1.00
#> Prog_548 2 0.000 0.994 0.00 1.00
#> Prog_516 1 0.000 0.993 1.00 0.00
#> Prog_562 2 0.000 0.994 0.00 1.00
#> Prog_592 1 0.000 0.993 1.00 0.00
#> Prog_575 1 0.000 0.993 1.00 0.00
#> Prog_608 2 0.000 0.994 0.00 1.00
#> Prog_603 2 0.000 0.994 0.00 1.00
#> Prog_616 1 0.000 0.993 1.00 0.00
#> Prog_649 2 0.000 0.994 0.00 1.00
#> Prog_655 2 0.000 0.994 0.00 1.00
#> Prog_638 2 0.000 0.994 0.00 1.00
#> Prog_657 1 0.000 0.993 1.00 0.00
#> Prog_663 2 0.000 0.994 0.00 1.00
#> Prog_640 1 0.000 0.993 1.00 0.00
#> Prog_677 2 0.000 0.994 0.00 1.00
#> Prog_697 2 0.000 0.994 0.00 1.00
#> Prog_688 2 0.000 0.994 0.00 1.00
#> Prog_700 1 0.000 0.993 1.00 0.00
#> Prog_695 1 0.000 0.993 1.00 0.00
#> Prog_701 1 0.000 0.993 1.00 0.00
#> Prog_719 2 0.000 0.994 0.00 1.00
#> Prog_723 2 0.000 0.994 0.00 1.00
#> Prog_730 2 0.000 0.994 0.00 1.00
#> Prog_731 2 0.000 0.994 0.00 1.00
#> Prog_776 2 0.000 0.994 0.00 1.00
#> Prog_788 2 0.000 0.994 0.00 1.00
#> Prog_790 2 0.680 0.781 0.18 0.82
#> Prog_767 1 0.000 0.993 1.00 0.00
#> Prog_780 1 0.000 0.993 1.00 0.00
#> Prog_786 1 0.000 0.993 1.00 0.00
#> Prog_830 2 0.000 0.994 0.00 1.00
#> Prog_813 2 0.000 0.994 0.00 1.00
#> Prog_819 2 0.000 0.994 0.00 1.00
#> Prog_825 1 0.925 0.485 0.66 0.34
#> Prog_814 2 0.000 0.994 0.00 1.00
#> Prog_826 2 0.000 0.994 0.00 1.00
#> Prog_838 2 0.000 0.994 0.00 1.00
#> Prog_821 1 0.000 0.993 1.00 0.00
#> Prog_822 1 0.722 0.749 0.80 0.20
#> Prog_828 1 0.000 0.993 1.00 0.00
cbind(get_classes(res, k = 3), get_membership(res, k = 3))
#> class entropy silhouette p1 p2 p3
#> Prog_008 3 0.0000 0.7919 0.00 0.00 1.00
#> Prog_014 2 0.4291 0.7253 0.00 0.82 0.18
#> Prog_009 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_033 2 0.5560 0.5807 0.00 0.70 0.30
#> Prog_039 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_028 2 0.0000 0.8676 0.00 1.00 0.00
#> Prog_035 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_006 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_049 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_061 3 0.0000 0.7919 0.00 0.00 1.00
#> Prog_079 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_081 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_082 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_046 2 0.0000 0.8676 0.00 1.00 0.00
#> Prog_053 3 0.3686 0.7297 0.00 0.14 0.86
#> Prog_084 3 0.0892 0.7882 0.00 0.02 0.98
#> Prog_091 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_098 3 0.8587 0.1060 0.10 0.40 0.50
#> Prog_110 1 0.0000 0.9701 1.00 0.00 0.00
#> LT-HSC_032 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_100 3 0.0000 0.7919 0.00 0.00 1.00
#> Prog_112 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_095 2 0.0000 0.8676 0.00 1.00 0.00
#> Prog_107 3 0.4002 0.6645 0.16 0.00 0.84
#> Prog_119 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_090 3 0.0000 0.7919 0.00 0.00 1.00
#> Prog_139 3 0.0000 0.7919 0.00 0.00 1.00
#> Prog_163 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_140 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_146 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_158 1 0.5835 0.4780 0.66 0.00 0.34
#> Prog_170 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_178 3 0.0000 0.7919 0.00 0.00 1.00
#> Prog_196 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_185 1 0.0000 0.9701 1.00 0.00 0.00
#> LT-HSC_064 3 0.0000 0.7919 0.00 0.00 1.00
#> Prog_217 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_229 3 0.0000 0.7919 0.00 0.00 1.00
#> Prog_211 3 0.5948 0.3493 0.00 0.36 0.64
#> Prog_249 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_221 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_239 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_215 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_216 1 0.0000 0.9701 1.00 0.00 0.00
#> HSPC_256 3 0.0000 0.7919 0.00 0.00 1.00
#> Prog_265 3 0.3686 0.7297 0.00 0.14 0.86
#> Prog_278 3 0.0892 0.7882 0.00 0.02 0.98
#> Prog_290 2 0.5706 0.5486 0.00 0.68 0.32
#> Prog_254 3 0.3686 0.7297 0.00 0.14 0.86
#> Prog_279 3 0.0000 0.7919 0.00 0.00 1.00
#> Prog_286 3 0.4291 0.6838 0.00 0.18 0.82
#> Prog_269 2 0.0000 0.8676 0.00 1.00 0.00
#> Prog_282 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_288 2 0.0000 0.8676 0.00 1.00 0.00
#> LT-HSC_091 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_326 1 0.0000 0.9701 1.00 0.00 0.00
#> LT-HSC_095 3 0.6244 0.1856 0.44 0.00 0.56
#> Prog_299 3 0.0000 0.7919 0.00 0.00 1.00
#> Prog_312 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_318 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_324 2 0.0000 0.8676 0.00 1.00 0.00
#> LT-HSC_098 2 0.0000 0.8676 0.00 1.00 0.00
#> HSPC_338 1 0.4291 0.7686 0.82 0.00 0.18
#> LT-HSC_100 1 0.0000 0.9701 1.00 0.00 0.00
#> LT-HSC_102 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_373 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_337 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_356 2 0.0000 0.8676 0.00 1.00 0.00
#> Prog_357 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_375 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_339 2 0.6045 0.4345 0.00 0.62 0.38
#> Prog_352 3 0.6126 0.3001 0.40 0.00 0.60
#> Prog_364 2 0.0000 0.8676 0.00 1.00 0.00
#> Prog_376 3 0.3686 0.7297 0.00 0.14 0.86
#> Prog_359 2 0.5835 0.5142 0.00 0.66 0.34
#> Prog_377 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_360 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_372 3 0.0892 0.7882 0.00 0.02 0.98
#> Prog_342 1 0.0000 0.9701 1.00 0.00 0.00
#> HSPC_404 2 0.6309 0.0872 0.00 0.50 0.50
#> HSPC_408 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_385 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_397 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_403 3 0.3686 0.7297 0.00 0.14 0.86
#> Prog_409 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_415 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_421 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_379 2 0.0000 0.8676 0.00 1.00 0.00
#> Prog_386 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_398 3 0.5948 0.3941 0.36 0.00 0.64
#> Prog_404 1 0.6302 0.1378 0.52 0.48 0.00
#> Prog_410 3 0.0000 0.7919 0.00 0.00 1.00
#> Prog_416 3 0.6045 0.2954 0.00 0.38 0.62
#> Prog_380 2 0.6192 0.3373 0.00 0.58 0.42
#> Prog_393 2 0.0000 0.8676 0.00 1.00 0.00
#> Prog_381 2 0.5835 0.5142 0.00 0.66 0.34
#> Prog_388 1 0.2959 0.8691 0.90 0.00 0.10
#> Prog_406 2 0.6302 0.1573 0.00 0.52 0.48
#> Prog_424 3 0.0000 0.7919 0.00 0.00 1.00
#> Prog_395 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_419 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_383 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_434 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_429 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_430 2 0.5397 0.6025 0.00 0.72 0.28
#> Prog_449 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_444 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_477 3 0.3340 0.7429 0.00 0.12 0.88
#> Prog_478 1 0.4002 0.7925 0.84 0.16 0.00
#> Prog_502 2 0.5835 0.5172 0.00 0.66 0.34
#> Prog_508 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_523 2 0.0000 0.8676 0.00 1.00 0.00
#> Prog_535 2 0.0000 0.8676 0.00 1.00 0.00
#> Prog_536 3 0.6244 0.1029 0.00 0.44 0.56
#> Prog_548 2 0.0000 0.8676 0.00 1.00 0.00
#> Prog_516 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_562 3 0.6302 -0.0461 0.00 0.48 0.52
#> Prog_592 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_575 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_608 2 0.0000 0.8676 0.00 1.00 0.00
#> Prog_603 2 0.0000 0.8676 0.00 1.00 0.00
#> Prog_616 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_649 2 0.6126 0.2357 0.00 0.60 0.40
#> Prog_655 3 0.3686 0.7297 0.00 0.14 0.86
#> Prog_638 2 0.0000 0.8676 0.00 1.00 0.00
#> Prog_657 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_663 2 0.0000 0.8676 0.00 1.00 0.00
#> Prog_640 1 0.6045 0.4193 0.62 0.38 0.00
#> Prog_677 3 0.0000 0.7919 0.00 0.00 1.00
#> Prog_697 2 0.0000 0.8676 0.00 1.00 0.00
#> Prog_688 2 0.0000 0.8676 0.00 1.00 0.00
#> Prog_700 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_695 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_701 3 0.6280 0.1279 0.46 0.00 0.54
#> Prog_719 2 0.0000 0.8676 0.00 1.00 0.00
#> Prog_723 2 0.0000 0.8676 0.00 1.00 0.00
#> Prog_730 3 0.0000 0.7919 0.00 0.00 1.00
#> Prog_731 3 0.3686 0.7297 0.00 0.14 0.86
#> Prog_776 2 0.0000 0.8676 0.00 1.00 0.00
#> Prog_788 2 0.0000 0.8676 0.00 1.00 0.00
#> Prog_790 2 0.1781 0.8435 0.02 0.96 0.02
#> Prog_767 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_780 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_786 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_830 2 0.0000 0.8676 0.00 1.00 0.00
#> Prog_813 2 0.0000 0.8676 0.00 1.00 0.00
#> Prog_819 2 0.5216 0.6351 0.00 0.74 0.26
#> Prog_825 2 0.0892 0.8456 0.02 0.98 0.00
#> Prog_814 3 0.2959 0.7541 0.00 0.10 0.90
#> Prog_826 2 0.0000 0.8676 0.00 1.00 0.00
#> Prog_838 2 0.0000 0.8676 0.00 1.00 0.00
#> Prog_821 1 0.0000 0.9701 1.00 0.00 0.00
#> Prog_822 3 0.8619 0.1831 0.42 0.10 0.48
#> Prog_828 1 0.5706 0.5257 0.68 0.00 0.32
cbind(get_classes(res, k = 4), get_membership(res, k = 4))
#> class entropy silhouette p1 p2 p3 p4
#> Prog_008 3 0.0000 0.8436 0.00 0.00 1.00 0.00
#> Prog_014 2 0.0000 0.8932 0.00 1.00 0.00 0.00
#> Prog_009 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_033 2 0.0000 0.8932 0.00 1.00 0.00 0.00
#> Prog_039 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_028 2 0.2647 0.8661 0.00 0.88 0.00 0.12
#> Prog_035 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_006 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_049 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_061 3 0.1211 0.8237 0.00 0.04 0.96 0.00
#> Prog_079 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_081 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_082 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_046 2 0.2647 0.8661 0.00 0.88 0.00 0.12
#> Prog_053 2 0.0000 0.8932 0.00 1.00 0.00 0.00
#> Prog_084 2 0.4134 0.5915 0.00 0.74 0.26 0.00
#> Prog_091 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_098 3 0.8870 0.2042 0.08 0.36 0.40 0.16
#> Prog_110 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> LT-HSC_032 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_100 3 0.2921 0.7415 0.00 0.14 0.86 0.00
#> Prog_112 1 0.0707 0.9683 0.98 0.00 0.02 0.00
#> Prog_095 4 0.0000 0.8729 0.00 0.00 0.00 1.00
#> Prog_107 3 0.0000 0.8436 0.00 0.00 1.00 0.00
#> Prog_119 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_090 3 0.5000 0.0233 0.00 0.50 0.50 0.00
#> Prog_139 3 0.0000 0.8436 0.00 0.00 1.00 0.00
#> Prog_163 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_140 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_146 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_158 3 0.0000 0.8436 0.00 0.00 1.00 0.00
#> Prog_170 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_178 2 0.4907 0.2126 0.00 0.58 0.42 0.00
#> Prog_196 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_185 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> LT-HSC_064 2 0.4977 0.0734 0.00 0.54 0.46 0.00
#> Prog_217 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_229 3 0.0000 0.8436 0.00 0.00 1.00 0.00
#> Prog_211 2 0.0000 0.8932 0.00 1.00 0.00 0.00
#> Prog_249 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_221 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_239 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_215 1 0.3801 0.6956 0.78 0.00 0.00 0.22
#> Prog_216 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> HSPC_256 2 0.4855 0.2735 0.00 0.60 0.40 0.00
#> Prog_265 2 0.0000 0.8932 0.00 1.00 0.00 0.00
#> Prog_278 2 0.1637 0.8535 0.00 0.94 0.06 0.00
#> Prog_290 2 0.0707 0.8912 0.00 0.98 0.00 0.02
#> Prog_254 2 0.0000 0.8932 0.00 1.00 0.00 0.00
#> Prog_279 3 0.0000 0.8436 0.00 0.00 1.00 0.00
#> Prog_286 2 0.0707 0.8830 0.00 0.98 0.02 0.00
#> Prog_269 4 0.0000 0.8729 0.00 0.00 0.00 1.00
#> Prog_282 1 0.4624 0.4450 0.66 0.00 0.00 0.34
#> Prog_288 2 0.2011 0.8824 0.00 0.92 0.00 0.08
#> LT-HSC_091 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_326 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> LT-HSC_095 3 0.0000 0.8436 0.00 0.00 1.00 0.00
#> Prog_299 3 0.5000 0.0261 0.00 0.50 0.50 0.00
#> Prog_312 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_318 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_324 2 0.2647 0.8661 0.00 0.88 0.00 0.12
#> LT-HSC_098 2 0.2647 0.8661 0.00 0.88 0.00 0.12
#> HSPC_338 3 0.0000 0.8436 0.00 0.00 1.00 0.00
#> LT-HSC_100 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> LT-HSC_102 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_373 4 0.4994 0.0974 0.48 0.00 0.00 0.52
#> Prog_337 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_356 4 0.1211 0.8509 0.00 0.04 0.00 0.96
#> Prog_357 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_375 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_339 2 0.0000 0.8932 0.00 1.00 0.00 0.00
#> Prog_352 3 0.0000 0.8436 0.00 0.00 1.00 0.00
#> Prog_364 4 0.0000 0.8729 0.00 0.00 0.00 1.00
#> Prog_376 2 0.0000 0.8932 0.00 1.00 0.00 0.00
#> Prog_359 2 0.0000 0.8932 0.00 1.00 0.00 0.00
#> Prog_377 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_360 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_372 2 0.4977 0.0707 0.00 0.54 0.46 0.00
#> Prog_342 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> HSPC_404 2 0.0000 0.8932 0.00 1.00 0.00 0.00
#> HSPC_408 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_385 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_397 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_403 2 0.0000 0.8932 0.00 1.00 0.00 0.00
#> Prog_409 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_415 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_421 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_379 2 0.2647 0.8661 0.00 0.88 0.00 0.12
#> Prog_386 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_398 3 0.0000 0.8436 0.00 0.00 1.00 0.00
#> Prog_404 4 0.0000 0.8729 0.00 0.00 0.00 1.00
#> Prog_410 3 0.0000 0.8436 0.00 0.00 1.00 0.00
#> Prog_416 2 0.0000 0.8932 0.00 1.00 0.00 0.00
#> Prog_380 2 0.0707 0.8912 0.00 0.98 0.00 0.02
#> Prog_393 2 0.3801 0.7612 0.00 0.78 0.00 0.22
#> Prog_381 2 0.0707 0.8912 0.00 0.98 0.00 0.02
#> Prog_388 3 0.3400 0.6271 0.18 0.00 0.82 0.00
#> Prog_406 2 0.0000 0.8932 0.00 1.00 0.00 0.00
#> Prog_424 2 0.4624 0.4299 0.00 0.66 0.34 0.00
#> Prog_395 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_419 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_383 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_434 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_429 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_430 2 0.1637 0.8865 0.00 0.94 0.00 0.06
#> Prog_449 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_444 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_477 2 0.0000 0.8932 0.00 1.00 0.00 0.00
#> Prog_478 4 0.2011 0.8169 0.08 0.00 0.00 0.92
#> Prog_502 2 0.0000 0.8932 0.00 1.00 0.00 0.00
#> Prog_508 4 0.2647 0.7739 0.12 0.00 0.00 0.88
#> Prog_523 2 0.2647 0.8661 0.00 0.88 0.00 0.12
#> Prog_535 2 0.2647 0.8661 0.00 0.88 0.00 0.12
#> Prog_536 2 0.0000 0.8932 0.00 1.00 0.00 0.00
#> Prog_548 2 0.2647 0.8661 0.00 0.88 0.00 0.12
#> Prog_516 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_562 2 0.0000 0.8932 0.00 1.00 0.00 0.00
#> Prog_592 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_575 4 0.2647 0.7739 0.12 0.00 0.00 0.88
#> Prog_608 2 0.2011 0.8806 0.00 0.92 0.00 0.08
#> Prog_603 4 0.0000 0.8729 0.00 0.00 0.00 1.00
#> Prog_616 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_649 2 0.5860 0.3283 0.00 0.58 0.04 0.38
#> Prog_655 2 0.0000 0.8932 0.00 1.00 0.00 0.00
#> Prog_638 2 0.2345 0.8725 0.00 0.90 0.00 0.10
#> Prog_657 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_663 2 0.2647 0.8661 0.00 0.88 0.00 0.12
#> Prog_640 4 0.0707 0.8653 0.02 0.00 0.00 0.98
#> Prog_677 3 0.1637 0.8111 0.00 0.06 0.94 0.00
#> Prog_697 2 0.2647 0.8661 0.00 0.88 0.00 0.12
#> Prog_688 4 0.0000 0.8729 0.00 0.00 0.00 1.00
#> Prog_700 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_695 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_701 3 0.0000 0.8436 0.00 0.00 1.00 0.00
#> Prog_719 2 0.0707 0.8923 0.00 0.98 0.00 0.02
#> Prog_723 2 0.2647 0.8661 0.00 0.88 0.00 0.12
#> Prog_730 3 0.0707 0.8350 0.00 0.02 0.98 0.00
#> Prog_731 2 0.0000 0.8932 0.00 1.00 0.00 0.00
#> Prog_776 2 0.1637 0.8864 0.00 0.94 0.00 0.06
#> Prog_788 2 0.2647 0.8661 0.00 0.88 0.00 0.12
#> Prog_790 4 0.1211 0.8484 0.00 0.04 0.00 0.96
#> Prog_767 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_780 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_786 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_830 4 0.3801 0.6064 0.00 0.22 0.00 0.78
#> Prog_813 2 0.2011 0.8806 0.00 0.92 0.00 0.08
#> Prog_819 2 0.0000 0.8932 0.00 1.00 0.00 0.00
#> Prog_825 4 0.0000 0.8729 0.00 0.00 0.00 1.00
#> Prog_814 2 0.0000 0.8932 0.00 1.00 0.00 0.00
#> Prog_826 2 0.2647 0.8661 0.00 0.88 0.00 0.12
#> Prog_838 2 0.2011 0.8806 0.00 0.92 0.00 0.08
#> Prog_821 1 0.0000 0.9898 1.00 0.00 0.00 0.00
#> Prog_822 3 0.4472 0.6024 0.00 0.02 0.76 0.22
#> Prog_828 3 0.4472 0.5542 0.22 0.00 0.76 0.02
Heatmaps for the consensus matrix. It visualizes the probability of two samples to be in a same group.
consensus_heatmap(res, k = 2)
consensus_heatmap(res, k = 3)
consensus_heatmap(res, k = 4)
Heatmaps for the membership of samples in all partitions to see how consistent they are:
membership_heatmap(res, k = 2)
membership_heatmap(res, k = 3)
membership_heatmap(res, k = 4)
As soon as the classes for columns are determined, the signatures that are significantly different between subgroups can be looked for. Following are the heatmaps for signatures.
Signature heatmaps where rows are scaled:
Signature heatmaps where rows are not scaled:
get_signatures(res, k = 2, scale_rows = FALSE)
get_signatures(res, k = 3, scale_rows = FALSE)
get_signatures(res, k = 4, scale_rows = FALSE)
Compare the overlap of signatures from different k:
compare_signatures(res)
get_signature() returns a data frame invisibly. To get the list of signatures, the function
call should be assigned to a variable explicitly. In following code, if plot argument is set
to FALSE, no heatmap is plotted while only the differential analysis is performed.
# code only for demonstration
tb = get_signature(res, k = ..., plot = FALSE)
An example of the output of tb is:
#> which_row fdr mean_1 mean_2 scaled_mean_1 scaled_mean_2 km
#> 1 38 0.042760348 8.373488 9.131774 -0.5533452 0.5164555 1
#> 2 40 0.018707592 7.106213 8.469186 -0.6173731 0.5762149 1
#> 3 55 0.019134737 10.221463 11.207825 -0.6159697 0.5749050 1
#> 4 59 0.006059896 5.921854 7.869574 -0.6899429 0.6439467 1
#> 5 60 0.018055526 8.928898 10.211722 -0.6204761 0.5791110 1
#> 6 98 0.009384629 15.714769 14.887706 0.6635654 -0.6193277 2
...
The columns in tb are:
which_row: row indices corresponding to the input matrix.fdr: FDR for the differential test. mean_x: The mean value in group x.scaled_mean_x: The mean value in group x after rows are scaled.km: Row groups if k-means clustering is applied to rows (which is done by automatically selecting number of clusters).If there are too many signatures, top_signatures = ... can be set to only show the
signatures with the highest FDRs:
# code only for demonstration
# e.g. to show the top 500 most significant rows
tb = get_signature(res, k = ..., top_signatures = 500)
If the signatures are defined as these which are uniquely high in current group, diff_method argument
can be set to "uniquely_high_in_one_group":
# code only for demonstration
tb = get_signature(res, k = ..., diff_method = "uniquely_high_in_one_group")
UMAP plot which shows how samples are separated.
dimension_reduction(res, k = 2, method = "UMAP")
dimension_reduction(res, k = 3, method = "UMAP")
dimension_reduction(res, k = 4, method = "UMAP")
Following heatmap shows how subgroups are split when increasing k:
collect_classes(res)
If matrix rows can be associated to genes, consider to use functional_enrichment(res,
...) to perform function enrichment for the signature genes. See this vignette for more detailed explanations.
Parent node: Node011. Child nodes: Node01111-leaf , Node01112-leaf , Node01113-leaf , Node01121-leaf , Node01122-leaf , Node01211-leaf , Node01212-leaf , Node01213-leaf , Node01221-leaf , Node01222-leaf , Node01223-leaf , Node01311-leaf , Node01312-leaf , Node02111-leaf , Node02112-leaf , Node02121-leaf , Node02122-leaf .
The object with results only for a single top-value method and a single partitioning method can be extracted as:
res = res_rh["0111"]
A summary of res and all the functions that can be applied to it:
res
#> A 'ConsensusPartition' object with k = 2, 3, 4.
#> On a matrix with 20396 rows and 82 columns.
#> Top rows (1627) are extracted by 'ATC' method.
#> Subgroups are detected by 'skmeans' method.
#> Performed in total 150 partitions by row resampling.
#> Best k for subgroups seems to be 3.
#>
#> Following methods can be applied to this 'ConsensusPartition' object:
#> [1] "cola_report" "collect_classes" "collect_plots"
#> [4] "collect_stats" "colnames" "compare_partitions"
#> [7] "compare_signatures" "consensus_heatmap" "dimension_reduction"
#> [10] "functional_enrichment" "get_anno_col" "get_anno"
#> [13] "get_classes" "get_consensus" "get_matrix"
#> [16] "get_membership" "get_param" "get_signatures"
#> [19] "get_stats" "is_best_k" "is_stable_k"
#> [22] "membership_heatmap" "ncol" "nrow"
#> [25] "plot_ecdf" "predict_classes" "rownames"
#> [28] "select_partition_number" "show" "suggest_best_k"
#> [31] "test_to_known_factors" "top_rows_heatmap"
collect_plots() function collects all the plots made from res for all k (number of subgroups)
into one single page to provide an easy and fast comparison between different k.
collect_plots(res)
The plots are:
k and the heatmap of
predicted classes for each k.k.k.k.All the plots in panels can be made by individual functions and they are plotted later in this section.
select_partition_number() produces several plots showing different
statistics for choosing “optimized” k. There are following statistics:
k;k, the area increased is defined as \(A_k - A_{k-1}\).The detailed explanations of these statistics can be found in the cola vignette.
Generally speaking, higher 1-PAC score, higher mean silhouette score or higher
concordance corresponds to better partition. Rand index and Jaccard index
measure how similar the current partition is compared to partition with k-1.
If they are too similar, we won't accept k is better than k-1.
select_partition_number(res)
The numeric values for all these statistics can be obtained by get_stats().
get_stats(res)
#> k 1-PAC mean_silhouette concordance area_increased Rand Jaccard
#> 2 2 1.000 0.988 0.995 0.5058 0.495 0.495
#> 3 3 1.000 0.970 0.989 0.2965 0.804 0.623
#> 4 4 0.824 0.851 0.909 0.0859 0.929 0.801
suggest_best_k() suggests the best \(k\) based on these statistics. The rules are as follows:
suggest_best_k(res)
#> [1] 3
#> attr(,"optional")
#> [1] 2
There is also optional best \(k\) = 2 that is worth to check.
Following is the table of the partitions (You need to click the show/hide
code output link to see it). The membership matrix (columns with name p*)
is inferred by
clue::cl_consensus()
function with the SE method. Basically the value in the membership matrix
represents the probability to belong to a certain group. The finall subgroup
label for an item is determined with the group with highest probability it
belongs to.
In get_classes() function, the entropy is calculated from the membership
matrix and the silhouette score is calculated from the consensus matrix.
cbind(get_classes(res, k = 2), get_membership(res, k = 2))
#> class entropy silhouette p1 p2
#> Prog_008 2 0.000 0.991 0.00 1.00
#> Prog_009 2 0.000 0.991 0.00 1.00
#> Prog_039 2 0.000 0.991 0.00 1.00
#> Prog_035 1 0.000 1.000 1.00 0.00
#> Prog_006 1 0.000 1.000 1.00 0.00
#> Prog_049 2 0.000 0.991 0.00 1.00
#> Prog_079 2 0.000 0.991 0.00 1.00
#> Prog_081 2 0.000 0.991 0.00 1.00
#> Prog_082 1 0.000 1.000 1.00 0.00
#> Prog_091 1 0.000 1.000 1.00 0.00
#> Prog_110 2 0.000 0.991 0.00 1.00
#> LT-HSC_032 1 0.000 1.000 1.00 0.00
#> Prog_112 2 0.000 0.991 0.00 1.00
#> Prog_107 2 0.000 0.991 0.00 1.00
#> Prog_119 1 0.000 1.000 1.00 0.00
#> Prog_163 1 0.000 1.000 1.00 0.00
#> Prog_140 1 0.000 1.000 1.00 0.00
#> Prog_146 1 0.000 1.000 1.00 0.00
#> Prog_158 2 0.000 0.991 0.00 1.00
#> Prog_170 2 0.000 0.991 0.00 1.00
#> Prog_196 1 0.000 1.000 1.00 0.00
#> Prog_185 1 0.000 1.000 1.00 0.00
#> Prog_217 1 0.000 1.000 1.00 0.00
#> Prog_229 2 0.000 0.991 0.00 1.00
#> Prog_249 1 0.000 1.000 1.00 0.00
#> Prog_221 1 0.000 1.000 1.00 0.00
#> Prog_239 1 0.000 1.000 1.00 0.00
#> Prog_215 1 0.000 1.000 1.00 0.00
#> Prog_216 1 0.000 1.000 1.00 0.00
#> Prog_279 2 0.000 0.991 0.00 1.00
#> Prog_282 2 0.000 0.991 0.00 1.00
#> LT-HSC_091 1 0.000 1.000 1.00 0.00
#> Prog_326 1 0.000 1.000 1.00 0.00
#> LT-HSC_095 2 0.000 0.991 0.00 1.00
#> Prog_312 1 0.000 1.000 1.00 0.00
#> Prog_318 1 0.000 1.000 1.00 0.00
#> HSPC_338 2 0.000 0.991 0.00 1.00
#> LT-HSC_100 2 0.000 0.991 0.00 1.00
#> LT-HSC_102 2 0.000 0.991 0.00 1.00
#> Prog_373 2 0.000 0.991 0.00 1.00
#> Prog_337 1 0.000 1.000 1.00 0.00
#> Prog_357 2 0.000 0.991 0.00 1.00
#> Prog_375 2 0.000 0.991 0.00 1.00
#> Prog_352 2 0.000 0.991 0.00 1.00
#> Prog_377 1 0.000 1.000 1.00 0.00
#> Prog_360 2 0.000 0.991 0.00 1.00
#> Prog_342 2 0.000 0.991 0.00 1.00
#> HSPC_408 1 0.000 1.000 1.00 0.00
#> Prog_385 1 0.000 1.000 1.00 0.00
#> Prog_397 2 0.000 0.991 0.00 1.00
#> Prog_409 2 0.000 0.991 0.00 1.00
#> Prog_415 2 0.000 0.991 0.00 1.00
#> Prog_421 2 0.000 0.991 0.00 1.00
#> Prog_386 2 0.000 0.991 0.00 1.00
#> Prog_398 2 0.000 0.991 0.00 1.00
#> Prog_404 2 0.000 0.991 0.00 1.00
#> Prog_388 2 0.000 0.991 0.00 1.00
#> Prog_395 2 0.000 0.991 0.00 1.00
#> Prog_419 2 0.000 0.991 0.00 1.00
#> Prog_383 1 0.000 1.000 1.00 0.00
#> Prog_434 1 0.000 1.000 1.00 0.00
#> Prog_429 1 0.000 1.000 1.00 0.00
#> Prog_449 1 0.000 1.000 1.00 0.00
#> Prog_444 1 0.000 1.000 1.00 0.00
#> Prog_478 2 0.958 0.387 0.38 0.62
#> Prog_508 1 0.000 1.000 1.00 0.00
#> Prog_516 1 0.000 1.000 1.00 0.00
#> Prog_592 1 0.000 1.000 1.00 0.00
#> Prog_575 1 0.000 1.000 1.00 0.00
#> Prog_616 2 0.000 0.991 0.00 1.00
#> Prog_657 2 0.000 0.991 0.00 1.00
#> Prog_640 1 0.000 1.000 1.00 0.00
#> Prog_700 2 0.000 0.991 0.00 1.00
#> Prog_695 1 0.000 1.000 1.00 0.00
#> Prog_701 2 0.000 0.991 0.00 1.00
#> Prog_767 1 0.000 1.000 1.00 0.00
#> Prog_780 1 0.000 1.000 1.00 0.00
#> Prog_786 2 0.000 0.991 0.00 1.00
#> Prog_825 2 0.000 0.991 0.00 1.00
#> Prog_821 1 0.000 1.000 1.00 0.00
#> Prog_822 2 0.000 0.991 0.00 1.00
#> Prog_828 2 0.000 0.991 0.00 1.00
cbind(get_classes(res, k = 3), get_membership(res, k = 3))
#> class entropy silhouette p1 p2 p3
#> Prog_008 2 0.0000 0.98989 0.00 1.00 0.00
#> Prog_009 2 0.0000 0.98989 0.00 1.00 0.00
#> Prog_039 2 0.0000 0.98989 0.00 1.00 0.00
#> Prog_035 1 0.0000 0.98190 1.00 0.00 0.00
#> Prog_006 1 0.0000 0.98190 1.00 0.00 0.00
#> Prog_049 2 0.0000 0.98989 0.00 1.00 0.00
#> Prog_079 2 0.0892 0.96916 0.02 0.98 0.00
#> Prog_081 2 0.5706 0.53200 0.00 0.68 0.32
#> Prog_082 1 0.0000 0.98190 1.00 0.00 0.00
#> Prog_091 1 0.0000 0.98190 1.00 0.00 0.00
#> Prog_110 2 0.0000 0.98989 0.00 1.00 0.00
#> LT-HSC_032 1 0.0000 0.98190 1.00 0.00 0.00
#> Prog_112 2 0.0000 0.98989 0.00 1.00 0.00
#> Prog_107 2 0.0000 0.98989 0.00 1.00 0.00
#> Prog_119 1 0.0000 0.98190 1.00 0.00 0.00
#> Prog_163 3 0.0000 0.99755 0.00 0.00 1.00
#> Prog_140 1 0.0000 0.98190 1.00 0.00 0.00
#> Prog_146 3 0.1529 0.95671 0.04 0.00 0.96
#> Prog_158 2 0.0000 0.98989 0.00 1.00 0.00
#> Prog_170 2 0.0000 0.98989 0.00 1.00 0.00
#> Prog_196 1 0.0000 0.98190 1.00 0.00 0.00
#> Prog_185 1 0.0000 0.98190 1.00 0.00 0.00
#> Prog_217 1 0.0000 0.98190 1.00 0.00 0.00
#> Prog_229 2 0.0000 0.98989 0.00 1.00 0.00
#> Prog_249 1 0.0000 0.98190 1.00 0.00 0.00
#> Prog_221 1 0.0000 0.98190 1.00 0.00 0.00
#> Prog_239 1 0.0000 0.98190 1.00 0.00 0.00
#> Prog_215 3 0.0000 0.99755 0.00 0.00 1.00
#> Prog_216 3 0.0000 0.99755 0.00 0.00 1.00
#> Prog_279 2 0.0000 0.98989 0.00 1.00 0.00
#> Prog_282 3 0.0000 0.99755 0.00 0.00 1.00
#> LT-HSC_091 1 0.0000 0.98190 1.00 0.00 0.00
#> Prog_326 1 0.0000 0.98190 1.00 0.00 0.00
#> LT-HSC_095 2 0.0000 0.98989 0.00 1.00 0.00
#> Prog_312 1 0.6309 -0.00473 0.50 0.00 0.50
#> Prog_318 1 0.0000 0.98190 1.00 0.00 0.00
#> HSPC_338 2 0.0000 0.98989 0.00 1.00 0.00
#> LT-HSC_100 2 0.0000 0.98989 0.00 1.00 0.00
#> LT-HSC_102 2 0.0000 0.98989 0.00 1.00 0.00
#> Prog_373 3 0.0000 0.99755 0.00 0.00 1.00
#> Prog_337 1 0.0000 0.98190 1.00 0.00 0.00
#> Prog_357 2 0.0000 0.98989 0.00 1.00 0.00
#> Prog_375 2 0.0000 0.98989 0.00 1.00 0.00
#> Prog_352 2 0.0000 0.98989 0.00 1.00 0.00
#> Prog_377 1 0.0000 0.98190 1.00 0.00 0.00
#> Prog_360 2 0.0000 0.98989 0.00 1.00 0.00
#> Prog_342 2 0.0000 0.98989 0.00 1.00 0.00
#> HSPC_408 1 0.0000 0.98190 1.00 0.00 0.00
#> Prog_385 1 0.0000 0.98190 1.00 0.00 0.00
#> Prog_397 2 0.0000 0.98989 0.00 1.00 0.00
#> Prog_409 2 0.0000 0.98989 0.00 1.00 0.00
#> Prog_415 2 0.0000 0.98989 0.00 1.00 0.00
#> Prog_421 2 0.0000 0.98989 0.00 1.00 0.00
#> Prog_386 2 0.0000 0.98989 0.00 1.00 0.00
#> Prog_398 2 0.0000 0.98989 0.00 1.00 0.00
#> Prog_404 3 0.0000 0.99755 0.00 0.00 1.00
#> Prog_388 2 0.0000 0.98989 0.00 1.00 0.00
#> Prog_395 2 0.0000 0.98989 0.00 1.00 0.00
#> Prog_419 2 0.0000 0.98989 0.00 1.00 0.00
#> Prog_383 1 0.0000 0.98190 1.00 0.00 0.00
#> Prog_434 1 0.0000 0.98190 1.00 0.00 0.00
#> Prog_429 1 0.0000 0.98190 1.00 0.00 0.00
#> Prog_449 1 0.0000 0.98190 1.00 0.00 0.00
#> Prog_444 1 0.0000 0.98190 1.00 0.00 0.00
#> Prog_478 3 0.0000 0.99755 0.00 0.00 1.00
#> Prog_508 3 0.0000 0.99755 0.00 0.00 1.00
#> Prog_516 1 0.0000 0.98190 1.00 0.00 0.00
#> Prog_592 1 0.0000 0.98190 1.00 0.00 0.00
#> Prog_575 3 0.0000 0.99755 0.00 0.00 1.00
#> Prog_616 2 0.0000 0.98989 0.00 1.00 0.00
#> Prog_657 2 0.0000 0.98989 0.00 1.00 0.00
#> Prog_640 3 0.0000 0.99755 0.00 0.00 1.00
#> Prog_700 2 0.0000 0.98989 0.00 1.00 0.00
#> Prog_695 1 0.0000 0.98190 1.00 0.00 0.00
#> Prog_701 2 0.0000 0.98989 0.00 1.00 0.00
#> Prog_767 3 0.0000 0.99755 0.00 0.00 1.00
#> Prog_780 3 0.0000 0.99755 0.00 0.00 1.00
#> Prog_786 3 0.0000 0.99755 0.00 0.00 1.00
#> Prog_825 3 0.0000 0.99755 0.00 0.00 1.00
#> Prog_821 3 0.0000 0.99755 0.00 0.00 1.00
#> Prog_822 3 0.0000 0.99755 0.00 0.00 1.00
#> Prog_828 3 0.0000 0.99755 0.00 0.00 1.00
cbind(get_classes(res, k = 4), get_membership(res, k = 4))
#> class entropy silhouette p1 p2 p3 p4
#> Prog_008 2 0.3610 0.859 0.00 0.80 0.00 0.20
#> Prog_009 2 0.4406 0.767 0.00 0.70 0.00 0.30
#> Prog_039 2 0.3801 0.847 0.00 0.78 0.00 0.22
#> Prog_035 1 0.0000 0.978 1.00 0.00 0.00 0.00
#> Prog_006 1 0.0707 0.964 0.98 0.00 0.02 0.00
#> Prog_049 2 0.3801 0.847 0.00 0.78 0.00 0.22
#> Prog_079 2 0.5224 0.832 0.04 0.76 0.02 0.18
#> Prog_081 4 0.0707 0.673 0.00 0.00 0.02 0.98
#> Prog_082 1 0.0707 0.964 0.98 0.00 0.02 0.00
#> Prog_091 1 0.0000 0.978 1.00 0.00 0.00 0.00
#> Prog_110 2 0.2921 0.890 0.00 0.86 0.00 0.14
#> LT-HSC_032 1 0.0000 0.978 1.00 0.00 0.00 0.00
#> Prog_112 2 0.2011 0.908 0.00 0.92 0.00 0.08
#> Prog_107 2 0.0000 0.916 0.00 1.00 0.00 0.00
#> Prog_119 1 0.0000 0.978 1.00 0.00 0.00 0.00
#> Prog_163 3 0.4624 0.449 0.00 0.00 0.66 0.34
#> Prog_140 1 0.0000 0.978 1.00 0.00 0.00 0.00
#> Prog_146 3 0.2011 0.738 0.08 0.00 0.92 0.00
#> Prog_158 2 0.2345 0.904 0.00 0.90 0.00 0.10
#> Prog_170 2 0.4277 0.792 0.00 0.72 0.00 0.28
#> Prog_196 1 0.0000 0.978 1.00 0.00 0.00 0.00
#> Prog_185 1 0.0000 0.978 1.00 0.00 0.00 0.00
#> Prog_217 1 0.0000 0.978 1.00 0.00 0.00 0.00
#> Prog_229 2 0.2011 0.908 0.00 0.92 0.00 0.08
#> Prog_249 4 0.4713 0.309 0.36 0.00 0.00 0.64
#> Prog_221 1 0.0000 0.978 1.00 0.00 0.00 0.00
#> Prog_239 1 0.0000 0.978 1.00 0.00 0.00 0.00
#> Prog_215 4 0.2647 0.756 0.00 0.00 0.12 0.88
#> Prog_216 3 0.3610 0.684 0.00 0.00 0.80 0.20
#> Prog_279 2 0.3610 0.859 0.00 0.80 0.00 0.20
#> Prog_282 4 0.3801 0.782 0.00 0.00 0.22 0.78
#> LT-HSC_091 1 0.0000 0.978 1.00 0.00 0.00 0.00
#> Prog_326 1 0.0000 0.978 1.00 0.00 0.00 0.00
#> LT-HSC_095 2 0.3610 0.859 0.00 0.80 0.00 0.20
#> Prog_312 3 0.3610 0.602 0.20 0.00 0.80 0.00
#> Prog_318 1 0.0000 0.978 1.00 0.00 0.00 0.00
#> HSPC_338 2 0.0000 0.916 0.00 1.00 0.00 0.00
#> LT-HSC_100 2 0.0707 0.911 0.00 0.98 0.02 0.00
#> LT-HSC_102 2 0.0707 0.911 0.00 0.98 0.02 0.00
#> Prog_373 4 0.3801 0.781 0.00 0.00 0.22 0.78
#> Prog_337 1 0.0000 0.978 1.00 0.00 0.00 0.00
#> Prog_357 2 0.0000 0.916 0.00 1.00 0.00 0.00
#> Prog_375 2 0.0000 0.916 0.00 1.00 0.00 0.00
#> Prog_352 2 0.2345 0.904 0.00 0.90 0.00 0.10
#> Prog_377 1 0.0000 0.978 1.00 0.00 0.00 0.00
#> Prog_360 2 0.2345 0.904 0.00 0.90 0.00 0.10
#> Prog_342 2 0.0707 0.911 0.00 0.98 0.02 0.00
#> HSPC_408 1 0.0707 0.964 0.98 0.00 0.02 0.00
#> Prog_385 1 0.0000 0.978 1.00 0.00 0.00 0.00
#> Prog_397 2 0.0707 0.916 0.00 0.98 0.00 0.02
#> Prog_409 2 0.0000 0.916 0.00 1.00 0.00 0.00
#> Prog_415 2 0.0000 0.916 0.00 1.00 0.00 0.00
#> Prog_421 2 0.0000 0.916 0.00 1.00 0.00 0.00
#> Prog_386 2 0.0707 0.911 0.00 0.98 0.02 0.00
#> Prog_398 2 0.0000 0.916 0.00 1.00 0.00 0.00
#> Prog_404 3 0.4855 0.278 0.00 0.00 0.60 0.40
#> Prog_388 2 0.0000 0.916 0.00 1.00 0.00 0.00
#> Prog_395 2 0.2647 0.898 0.00 0.88 0.00 0.12
#> Prog_419 2 0.0707 0.911 0.00 0.98 0.02 0.00
#> Prog_383 1 0.0000 0.978 1.00 0.00 0.00 0.00
#> Prog_434 1 0.0000 0.978 1.00 0.00 0.00 0.00
#> Prog_429 1 0.0000 0.978 1.00 0.00 0.00 0.00
#> Prog_449 1 0.0000 0.978 1.00 0.00 0.00 0.00
#> Prog_444 1 0.0000 0.978 1.00 0.00 0.00 0.00
#> Prog_478 4 0.3610 0.797 0.00 0.00 0.20 0.80
#> Prog_508 4 0.3610 0.797 0.00 0.00 0.20 0.80
#> Prog_516 1 0.5355 0.393 0.62 0.00 0.02 0.36
#> Prog_592 1 0.2335 0.911 0.92 0.00 0.02 0.06
#> Prog_575 4 0.4134 0.725 0.00 0.00 0.26 0.74
#> Prog_616 2 0.4406 0.611 0.00 0.70 0.00 0.30
#> Prog_657 4 0.2647 0.509 0.00 0.12 0.00 0.88
#> Prog_640 4 0.3610 0.797 0.00 0.00 0.20 0.80
#> Prog_700 2 0.0707 0.909 0.00 0.98 0.02 0.00
#> Prog_695 1 0.1211 0.944 0.96 0.00 0.04 0.00
#> Prog_701 2 0.0000 0.916 0.00 1.00 0.00 0.00
#> Prog_767 3 0.2921 0.741 0.00 0.00 0.86 0.14
#> Prog_780 3 0.0707 0.779 0.02 0.00 0.98 0.00
#> Prog_786 3 0.0707 0.780 0.00 0.02 0.98 0.00
#> Prog_825 4 0.3610 0.797 0.00 0.00 0.20 0.80
#> Prog_821 3 0.2011 0.771 0.00 0.00 0.92 0.08
#> Prog_822 3 0.3525 0.676 0.00 0.10 0.86 0.04
#> Prog_828 3 0.0707 0.780 0.00 0.02 0.98 0.00
Heatmaps for the consensus matrix. It visualizes the probability of two samples to be in a same group.
consensus_heatmap(res, k = 2)
consensus_heatmap(res, k = 3)
consensus_heatmap(res, k = 4)
Heatmaps for the membership of samples in all partitions to see how consistent they are:
membership_heatmap(res, k = 2)
membership_heatmap(res, k = 3)
membership_heatmap(res, k = 4)
As soon as the classes for columns are determined, the signatures that are significantly different between subgroups can be looked for. Following are the heatmaps for signatures.
Signature heatmaps where rows are scaled:
Signature heatmaps where rows are not scaled:
get_signatures(res, k = 2, scale_rows = FALSE)
get_signatures(res, k = 3, scale_rows = FALSE)
get_signatures(res, k = 4, scale_rows = FALSE)
Compare the overlap of signatures from different k:
compare_signatures(res)
get_signature() returns a data frame invisibly. To get the list of signatures, the function
call should be assigned to a variable explicitly. In following code, if plot argument is set
to FALSE, no heatmap is plotted while only the differential analysis is performed.
# code only for demonstration
tb = get_signature(res, k = ..., plot = FALSE)
An example of the output of tb is:
#> which_row fdr mean_1 mean_2 scaled_mean_1 scaled_mean_2 km
#> 1 38 0.042760348 8.373488 9.131774 -0.5533452 0.5164555 1
#> 2 40 0.018707592 7.106213 8.469186 -0.6173731 0.5762149 1
#> 3 55 0.019134737 10.221463 11.207825 -0.6159697 0.5749050 1
#> 4 59 0.006059896 5.921854 7.869574 -0.6899429 0.6439467 1
#> 5 60 0.018055526 8.928898 10.211722 -0.6204761 0.5791110 1
#> 6 98 0.009384629 15.714769 14.887706 0.6635654 -0.6193277 2
...
The columns in tb are:
which_row: row indices corresponding to the input matrix.fdr: FDR for the differential test. mean_x: The mean value in group x.scaled_mean_x: The mean value in group x after rows are scaled.km: Row groups if k-means clustering is applied to rows (which is done by automatically selecting number of clusters).If there are too many signatures, top_signatures = ... can be set to only show the
signatures with the highest FDRs:
# code only for demonstration
# e.g. to show the top 500 most significant rows
tb = get_signature(res, k = ..., top_signatures = 500)
If the signatures are defined as these which are uniquely high in current group, diff_method argument
can be set to "uniquely_high_in_one_group":
# code only for demonstration
tb = get_signature(res, k = ..., diff_method = "uniquely_high_in_one_group")
UMAP plot which shows how samples are separated.
dimension_reduction(res, k = 2, method = "UMAP")
dimension_reduction(res, k = 3, method = "UMAP")
dimension_reduction(res, k = 4, method = "UMAP")
Following heatmap shows how subgroups are split when increasing k:
collect_classes(res)
If matrix rows can be associated to genes, consider to use functional_enrichment(res,
...) to perform function enrichment for the signature genes. See this vignette for more detailed explanations.
Parent node: Node011. Child nodes: Node01111-leaf , Node01112-leaf , Node01113-leaf , Node01121-leaf , Node01122-leaf , Node01211-leaf , Node01212-leaf , Node01213-leaf , Node01221-leaf , Node01222-leaf , Node01223-leaf , Node01311-leaf , Node01312-leaf , Node02111-leaf , Node02112-leaf , Node02121-leaf , Node02122-leaf .
The object with results only for a single top-value method and a single partitioning method can be extracted as:
res = res_rh["0112"]
A summary of res and all the functions that can be applied to it:
res
#> A 'ConsensusPartition' object with k = 2, 3, 4.
#> On a matrix with 16676 rows and 72 columns.
#> Top rows (1668) are extracted by 'ATC' method.
#> Subgroups are detected by 'skmeans' method.
#> Performed in total 150 partitions by row resampling.
#> Best k for subgroups seems to be 2.
#>
#> Following methods can be applied to this 'ConsensusPartition' object:
#> [1] "cola_report" "collect_classes" "collect_plots"
#> [4] "collect_stats" "colnames" "compare_partitions"
#> [7] "compare_signatures" "consensus_heatmap" "dimension_reduction"
#> [10] "functional_enrichment" "get_anno_col" "get_anno"
#> [13] "get_classes" "get_consensus" "get_matrix"
#> [16] "get_membership" "get_param" "get_signatures"
#> [19] "get_stats" "is_best_k" "is_stable_k"
#> [22] "membership_heatmap" "ncol" "nrow"
#> [25] "plot_ecdf" "predict_classes" "rownames"
#> [28] "select_partition_number" "show" "suggest_best_k"
#> [31] "test_to_known_factors" "top_rows_heatmap"
collect_plots() function collects all the plots made from res for all k (number of subgroups)
into one single page to provide an easy and fast comparison between different k.
collect_plots(res)
The plots are:
k and the heatmap of
predicted classes for each k.k.k.k.All the plots in panels can be made by individual functions and they are plotted later in this section.
select_partition_number() produces several plots showing different
statistics for choosing “optimized” k. There are following statistics:
k;k, the area increased is defined as \(A_k - A_{k-1}\).The detailed explanations of these statistics can be found in the cola vignette.
Generally speaking, higher 1-PAC score, higher mean silhouette score or higher
concordance corresponds to better partition. Rand index and Jaccard index
measure how similar the current partition is compared to partition with k-1.
If they are too similar, we won't accept k is better than k-1.
select_partition_number(res)
The numeric values for all these statistics can be obtained by get_stats().
get_stats(res)
#> k 1-PAC mean_silhouette concordance area_increased Rand Jaccard
#> 2 2 1.000 0.987 0.994 0.482 0.518 0.518
#> 3 3 0.863 0.862 0.940 0.304 0.861 0.734
#> 4 4 0.638 0.666 0.838 0.107 0.888 0.729
suggest_best_k() suggests the best \(k\) based on these statistics. The rules are as follows:
suggest_best_k(res)
#> [1] 2
Following is the table of the partitions (You need to click the show/hide
code output link to see it). The membership matrix (columns with name p*)
is inferred by
clue::cl_consensus()
function with the SE method. Basically the value in the membership matrix
represents the probability to belong to a certain group. The finall subgroup
label for an item is determined with the group with highest probability it
belongs to.
In get_classes() function, the entropy is calculated from the membership
matrix and the silhouette score is calculated from the consensus matrix.
cbind(get_classes(res, k = 2), get_membership(res, k = 2))
#> class entropy silhouette p1 p2
#> Prog_014 1 0.000 0.996 1.00 0.00
#> Prog_033 1 0.680 0.778 0.82 0.18
#> Prog_028 2 0.000 0.991 0.00 1.00
#> Prog_061 1 0.000 0.996 1.00 0.00
#> Prog_046 2 0.000 0.991 0.00 1.00
#> Prog_053 1 0.000 0.996 1.00 0.00
#> Prog_084 1 0.000 0.996 1.00 0.00
#> Prog_098 1 0.000 0.996 1.00 0.00
#> Prog_100 1 0.000 0.996 1.00 0.00
#> Prog_095 2 0.000 0.991 0.00 1.00
#> Prog_090 1 0.000 0.996 1.00 0.00
#> Prog_139 1 0.000 0.996 1.00 0.00
#> Prog_178 1 0.000 0.996 1.00 0.00
#> LT-HSC_064 1 0.000 0.996 1.00 0.00
#> Prog_211 1 0.000 0.996 1.00 0.00
#> HSPC_256 1 0.000 0.996 1.00 0.00
#> Prog_265 1 0.000 0.996 1.00 0.00
#> Prog_278 1 0.000 0.996 1.00 0.00
#> Prog_290 2 0.000 0.991 0.00 1.00
#> Prog_254 1 0.000 0.996 1.00 0.00
#> Prog_286 1 0.000 0.996 1.00 0.00
#> Prog_269 2 0.000 0.991 0.00 1.00
#> Prog_288 2 0.000 0.991 0.00 1.00
#> Prog_299 1 0.000 0.996 1.00 0.00
#> Prog_324 2 0.000 0.991 0.00 1.00
#> LT-HSC_098 2 0.000 0.991 0.00 1.00
#> Prog_356 1 0.000 0.996 1.00 0.00
#> Prog_339 2 0.000 0.991 0.00 1.00
#> Prog_364 2 0.000 0.991 0.00 1.00
#> Prog_376 1 0.000 0.996 1.00 0.00
#> Prog_359 2 0.000 0.991 0.00 1.00
#> Prog_372 1 0.000 0.996 1.00 0.00
#> HSPC_404 1 0.000 0.996 1.00 0.00
#> Prog_403 1 0.000 0.996 1.00 0.00
#> Prog_379 2 0.000 0.991 0.00 1.00
#> Prog_410 1 0.000 0.996 1.00 0.00
#> Prog_416 1 0.000 0.996 1.00 0.00
#> Prog_380 2 0.000 0.991 0.00 1.00
#> Prog_393 1 0.000 0.996 1.00 0.00
#> Prog_381 2 0.000 0.991 0.00 1.00
#> Prog_406 1 0.000 0.996 1.00 0.00
#> Prog_424 1 0.000 0.996 1.00 0.00
#> Prog_430 1 0.000 0.996 1.00 0.00
#> Prog_477 1 0.000 0.996 1.00 0.00
#> Prog_502 1 0.000 0.996 1.00 0.00
#> Prog_523 2 0.000 0.991 0.00 1.00
#> Prog_535 2 0.000 0.991 0.00 1.00
#> Prog_536 2 0.000 0.991 0.00 1.00
#> Prog_548 2 0.000 0.991 0.00 1.00
#> Prog_562 1 0.000 0.996 1.00 0.00
#> Prog_608 2 0.000 0.991 0.00 1.00
#> Prog_603 2 0.000 0.991 0.00 1.00
#> Prog_649 1 0.000 0.996 1.00 0.00
#> Prog_655 1 0.000 0.996 1.00 0.00
#> Prog_638 2 0.795 0.682 0.24 0.76
#> Prog_663 2 0.000 0.991 0.00 1.00
#> Prog_677 1 0.000 0.996 1.00 0.00
#> Prog_697 2 0.000 0.991 0.00 1.00
#> Prog_688 2 0.000 0.991 0.00 1.00
#> Prog_719 1 0.000 0.996 1.00 0.00
#> Prog_723 2 0.000 0.991 0.00 1.00
#> Prog_730 1 0.000 0.996 1.00 0.00
#> Prog_731 1 0.000 0.996 1.00 0.00
#> Prog_776 1 0.000 0.996 1.00 0.00
#> Prog_788 2 0.000 0.991 0.00 1.00
#> Prog_790 1 0.000 0.996 1.00 0.00
#> Prog_830 2 0.000 0.991 0.00 1.00
#> Prog_813 1 0.000 0.996 1.00 0.00
#> Prog_819 1 0.000 0.996 1.00 0.00
#> Prog_814 1 0.000 0.996 1.00 0.00
#> Prog_826 2 0.000 0.991 0.00 1.00
#> Prog_838 1 0.000 0.996 1.00 0.00
cbind(get_classes(res, k = 3), get_membership(res, k = 3))
#> class entropy silhouette p1 p2 p3
#> Prog_014 3 0.0000 0.885 0.00 0.00 1.00
#> Prog_033 3 0.0000 0.885 0.00 0.00 1.00
#> Prog_028 2 0.0000 0.976 0.00 1.00 0.00
#> Prog_061 1 0.0000 0.913 1.00 0.00 0.00
#> Prog_046 2 0.0000 0.976 0.00 1.00 0.00
#> Prog_053 1 0.0892 0.909 0.98 0.00 0.02
#> Prog_084 1 0.0000 0.913 1.00 0.00 0.00
#> Prog_098 1 0.2537 0.868 0.92 0.00 0.08
#> Prog_100 1 0.0000 0.913 1.00 0.00 0.00
#> Prog_095 2 0.0000 0.976 0.00 1.00 0.00
#> Prog_090 1 0.0000 0.913 1.00 0.00 0.00
#> Prog_139 1 0.0000 0.913 1.00 0.00 0.00
#> Prog_178 1 0.0000 0.913 1.00 0.00 0.00
#> LT-HSC_064 1 0.0000 0.913 1.00 0.00 0.00
#> Prog_211 1 0.1529 0.902 0.96 0.00 0.04
#> HSPC_256 1 0.0000 0.913 1.00 0.00 0.00
#> Prog_265 1 0.0892 0.909 0.98 0.00 0.02
#> Prog_278 1 0.0892 0.909 0.98 0.00 0.02
#> Prog_290 2 0.0000 0.976 0.00 1.00 0.00
#> Prog_254 1 0.0892 0.909 0.98 0.00 0.02
#> Prog_286 1 0.0892 0.906 0.98 0.00 0.02
#> Prog_269 2 0.0000 0.976 0.00 1.00 0.00
#> Prog_288 2 0.1529 0.943 0.00 0.96 0.04
#> Prog_299 1 0.0000 0.913 1.00 0.00 0.00
#> Prog_324 2 0.0000 0.976 0.00 1.00 0.00
#> LT-HSC_098 2 0.2537 0.905 0.00 0.92 0.08
#> Prog_356 3 0.2537 0.861 0.08 0.00 0.92
#> Prog_339 2 0.0000 0.976 0.00 1.00 0.00
#> Prog_364 2 0.0000 0.976 0.00 1.00 0.00
#> Prog_376 1 0.2066 0.886 0.94 0.00 0.06
#> Prog_359 3 0.2959 0.829 0.00 0.10 0.90
#> Prog_372 1 0.0000 0.913 1.00 0.00 0.00
#> HSPC_404 1 0.2537 0.868 0.92 0.00 0.08
#> Prog_403 1 0.6045 0.374 0.62 0.00 0.38
#> Prog_379 2 0.0000 0.976 0.00 1.00 0.00
#> Prog_410 1 0.0000 0.913 1.00 0.00 0.00
#> Prog_416 3 0.6192 0.251 0.42 0.00 0.58
#> Prog_380 2 0.0000 0.976 0.00 1.00 0.00
#> Prog_393 3 0.0892 0.884 0.02 0.00 0.98
#> Prog_381 2 0.0000 0.976 0.00 1.00 0.00
#> Prog_406 3 0.2537 0.865 0.08 0.00 0.92
#> Prog_424 1 0.0892 0.909 0.98 0.00 0.02
#> Prog_430 1 0.2066 0.880 0.94 0.00 0.06
#> Prog_477 1 0.0892 0.909 0.98 0.00 0.02
#> Prog_502 1 0.1529 0.902 0.96 0.00 0.04
#> Prog_523 2 0.0000 0.976 0.00 1.00 0.00
#> Prog_535 2 0.0000 0.976 0.00 1.00 0.00
#> Prog_536 2 0.0892 0.961 0.00 0.98 0.02
#> Prog_548 2 0.0000 0.976 0.00 1.00 0.00
#> Prog_562 1 0.5835 0.522 0.66 0.00 0.34
#> Prog_608 2 0.6192 0.276 0.00 0.58 0.42
#> Prog_603 2 0.0000 0.976 0.00 1.00 0.00
#> Prog_649 1 0.0892 0.906 0.98 0.00 0.02
#> Prog_655 1 0.0892 0.906 0.98 0.00 0.02
#> Prog_638 3 0.3686 0.788 0.00 0.14 0.86
#> Prog_663 2 0.0000 0.976 0.00 1.00 0.00
#> Prog_677 1 0.0000 0.913 1.00 0.00 0.00
#> Prog_697 2 0.0892 0.961 0.00 0.98 0.02
#> Prog_688 2 0.0000 0.976 0.00 1.00 0.00
#> Prog_719 3 0.3340 0.830 0.12 0.00 0.88
#> Prog_723 2 0.0000 0.976 0.00 1.00 0.00
#> Prog_730 1 0.0000 0.913 1.00 0.00 0.00
#> Prog_731 1 0.0892 0.909 0.98 0.00 0.02
#> Prog_776 1 0.5948 0.466 0.64 0.00 0.36
#> Prog_788 2 0.0000 0.976 0.00 1.00 0.00
#> Prog_790 1 0.4796 0.720 0.78 0.00 0.22
#> Prog_830 2 0.0000 0.976 0.00 1.00 0.00
#> Prog_813 3 0.0000 0.885 0.00 0.00 1.00
#> Prog_819 1 0.6280 0.221 0.54 0.00 0.46
#> Prog_814 1 0.0000 0.913 1.00 0.00 0.00
#> Prog_826 2 0.0000 0.976 0.00 1.00 0.00
#> Prog_838 1 0.6302 0.105 0.52 0.00 0.48
cbind(get_classes(res, k = 4), get_membership(res, k = 4))
#> class entropy silhouette p1 p2 p3 p4
#> Prog_014 3 0.2647 0.661 0.00 0.00 0.88 0.12
#> Prog_033 3 0.2345 0.668 0.00 0.00 0.90 0.10
#> Prog_028 2 0.0707 0.877 0.00 0.98 0.00 0.02
#> Prog_061 1 0.0000 0.848 1.00 0.00 0.00 0.00
#> Prog_046 2 0.4406 0.618 0.00 0.70 0.30 0.00
#> Prog_053 1 0.0000 0.848 1.00 0.00 0.00 0.00
#> Prog_084 1 0.0000 0.848 1.00 0.00 0.00 0.00
#> Prog_098 4 0.5487 0.453 0.40 0.00 0.02 0.58
#> Prog_100 1 0.0000 0.848 1.00 0.00 0.00 0.00
#> Prog_095 2 0.3853 0.788 0.00 0.82 0.16 0.02
#> Prog_090 1 0.0000 0.848 1.00 0.00 0.00 0.00
#> Prog_139 1 0.2647 0.760 0.88 0.00 0.00 0.12
#> Prog_178 1 0.0000 0.848 1.00 0.00 0.00 0.00
#> LT-HSC_064 1 0.0000 0.848 1.00 0.00 0.00 0.00
#> Prog_211 1 0.0000 0.848 1.00 0.00 0.00 0.00
#> HSPC_256 1 0.0000 0.848 1.00 0.00 0.00 0.00
#> Prog_265 1 0.0000 0.848 1.00 0.00 0.00 0.00
#> Prog_278 1 0.0000 0.848 1.00 0.00 0.00 0.00
#> Prog_290 2 0.2011 0.867 0.00 0.92 0.00 0.08
#> Prog_254 1 0.0000 0.848 1.00 0.00 0.00 0.00
#> Prog_286 1 0.3801 0.611 0.78 0.00 0.00 0.22
#> Prog_269 2 0.1637 0.862 0.00 0.94 0.06 0.00
#> Prog_288 2 0.4284 0.791 0.00 0.78 0.02 0.20
#> Prog_299 1 0.0707 0.838 0.98 0.00 0.00 0.02
#> Prog_324 2 0.0707 0.876 0.00 0.98 0.00 0.02
#> LT-HSC_098 2 0.6104 0.675 0.00 0.68 0.14 0.18
#> Prog_356 4 0.4472 0.125 0.02 0.00 0.22 0.76
#> Prog_339 2 0.3853 0.827 0.00 0.82 0.02 0.16
#> Prog_364 2 0.2706 0.860 0.00 0.90 0.02 0.08
#> Prog_376 1 0.3335 0.713 0.86 0.00 0.02 0.12
#> Prog_359 4 0.6605 -0.421 0.00 0.08 0.44 0.48
#> Prog_372 1 0.2647 0.763 0.88 0.00 0.00 0.12
#> HSPC_404 1 0.4088 0.677 0.82 0.00 0.04 0.14
#> Prog_403 1 0.6855 0.193 0.60 0.00 0.20 0.20
#> Prog_379 2 0.3037 0.853 0.00 0.88 0.02 0.10
#> Prog_410 1 0.1211 0.822 0.96 0.00 0.00 0.04
#> Prog_416 1 0.7674 -0.185 0.46 0.00 0.26 0.28
#> Prog_380 2 0.3853 0.826 0.00 0.82 0.02 0.16
#> Prog_393 4 0.6831 -0.127 0.10 0.00 0.42 0.48
#> Prog_381 2 0.3037 0.853 0.00 0.88 0.02 0.10
#> Prog_406 3 0.6766 0.333 0.10 0.00 0.52 0.38
#> Prog_424 1 0.0000 0.848 1.00 0.00 0.00 0.00
#> Prog_430 4 0.4855 0.461 0.40 0.00 0.00 0.60
#> Prog_477 1 0.0000 0.848 1.00 0.00 0.00 0.00
#> Prog_502 1 0.2830 0.778 0.90 0.00 0.04 0.06
#> Prog_523 2 0.3400 0.784 0.00 0.82 0.18 0.00
#> Prog_535 2 0.0000 0.875 0.00 1.00 0.00 0.00
#> Prog_536 2 0.6089 0.626 0.00 0.64 0.08 0.28
#> Prog_548 2 0.0707 0.876 0.00 0.98 0.00 0.02
#> Prog_562 4 0.6216 0.493 0.22 0.00 0.12 0.66
#> Prog_608 3 0.5256 0.489 0.00 0.26 0.70 0.04
#> Prog_603 2 0.3610 0.765 0.00 0.80 0.20 0.00
#> Prog_649 1 0.4284 0.619 0.78 0.00 0.02 0.20
#> Prog_655 1 0.4624 0.326 0.66 0.00 0.00 0.34
#> Prog_638 3 0.5428 0.549 0.00 0.12 0.74 0.14
#> Prog_663 2 0.1637 0.862 0.00 0.94 0.06 0.00
#> Prog_677 1 0.0707 0.838 0.98 0.00 0.00 0.02
#> Prog_697 2 0.3198 0.854 0.00 0.88 0.04 0.08
#> Prog_688 2 0.1637 0.862 0.00 0.94 0.06 0.00
#> Prog_719 3 0.3606 0.564 0.14 0.00 0.84 0.02
#> Prog_723 2 0.0000 0.875 0.00 1.00 0.00 0.00
#> Prog_730 1 0.4522 0.372 0.68 0.00 0.00 0.32
#> Prog_731 1 0.0000 0.848 1.00 0.00 0.00 0.00
#> Prog_776 4 0.6011 0.257 0.48 0.00 0.04 0.48
#> Prog_788 2 0.1637 0.862 0.00 0.94 0.06 0.00
#> Prog_790 4 0.5428 0.482 0.38 0.00 0.02 0.60
#> Prog_830 2 0.2011 0.867 0.00 0.92 0.00 0.08
#> Prog_813 3 0.5173 0.579 0.02 0.00 0.66 0.32
#> Prog_819 4 0.2647 0.420 0.12 0.00 0.00 0.88
#> Prog_814 1 0.0000 0.848 1.00 0.00 0.00 0.00
#> Prog_826 2 0.1211 0.868 0.00 0.96 0.04 0.00
#> Prog_838 1 0.7544 -0.292 0.46 0.00 0.20 0.34
Heatmaps for the consensus matrix. It visualizes the probability of two samples to be in a same group.
consensus_heatmap(res, k = 2)
consensus_heatmap(res, k = 3)
consensus_heatmap(res, k = 4)
Heatmaps for the membership of samples in all partitions to see how consistent they are:
membership_heatmap(res, k = 2)
membership_heatmap(res, k = 3)
membership_heatmap(res, k = 4)
As soon as the classes for columns are determined, the signatures that are significantly different between subgroups can be looked for. Following are the heatmaps for signatures.
Signature heatmaps where rows are scaled:
Signature heatmaps where rows are not scaled:
get_signatures(res, k = 2, scale_rows = FALSE)
get_signatures(res, k = 3, scale_rows = FALSE)
get_signatures(res, k = 4, scale_rows = FALSE)
Compare the overlap of signatures from different k:
compare_signatures(res)
get_signature() returns a data frame invisibly. To get the list of signatures, the function
call should be assigned to a variable explicitly. In following code, if plot argument is set
to FALSE, no heatmap is plotted while only the differential analysis is performed.
# code only for demonstration
tb = get_signature(res, k = ..., plot = FALSE)
An example of the output of tb is:
#> which_row fdr mean_1 mean_2 scaled_mean_1 scaled_mean_2 km
#> 1 38 0.042760348 8.373488 9.131774 -0.5533452 0.5164555 1
#> 2 40 0.018707592 7.106213 8.469186 -0.6173731 0.5762149 1
#> 3 55 0.019134737 10.221463 11.207825 -0.6159697 0.5749050 1
#> 4 59 0.006059896 5.921854 7.869574 -0.6899429 0.6439467 1
#> 5 60 0.018055526 8.928898 10.211722 -0.6204761 0.5791110 1
#> 6 98 0.009384629 15.714769 14.887706 0.6635654 -0.6193277 2
...
The columns in tb are:
which_row: row indices corresponding to the input matrix.fdr: FDR for the differential test. mean_x: The mean value in group x.scaled_mean_x: The mean value in group x after rows are scaled.km: Row groups if k-means clustering is applied to rows (which is done by automatically selecting number of clusters).If there are too many signatures, top_signatures = ... can be set to only show the
signatures with the highest FDRs:
# code only for demonstration
# e.g. to show the top 500 most significant rows
tb = get_signature(res, k = ..., top_signatures = 500)
If the signatures are defined as these which are uniquely high in current group, diff_method argument
can be set to "uniquely_high_in_one_group":
# code only for demonstration
tb = get_signature(res, k = ..., diff_method = "uniquely_high_in_one_group")
UMAP plot which shows how samples are separated.
dimension_reduction(res, k = 2, method = "UMAP")
dimension_reduction(res, k = 3, method = "UMAP")
dimension_reduction(res, k = 4, method = "UMAP")
Following heatmap shows how subgroups are split when increasing k:
collect_classes(res)
If matrix rows can be associated to genes, consider to use functional_enrichment(res,
...) to perform function enrichment for the signature genes. See this vignette for more detailed explanations.
Parent node: Node01. Child nodes: Node0111 , Node0112 , Node0121 , Node0122 , Node0131 , Node0132-leaf , Node0141-leaf , Node0142-leaf , Node0211 , Node0212 , Node0213-leaf , Node0311-leaf , Node0312-leaf , Node0321-leaf , Node0322-leaf , Node0331-leaf , Node0332-leaf , Node0411-leaf , Node0412-leaf , Node0413-leaf , Node0421-leaf , Node0422-leaf , Node0423-leaf .
The object with results only for a single top-value method and a single partitioning method can be extracted as:
res = res_rh["012"]
A summary of res and all the functions that can be applied to it:
res
#> A 'ConsensusPartition' object with k = 2, 3, 4.
#> On a matrix with 17327 rows and 248 columns.
#> Top rows (1733) are extracted by 'ATC' method.
#> Subgroups are detected by 'skmeans' method.
#> Performed in total 150 partitions by row resampling.
#> Best k for subgroups seems to be 4.
#>
#> Following methods can be applied to this 'ConsensusPartition' object:
#> [1] "cola_report" "collect_classes" "collect_plots"
#> [4] "collect_stats" "colnames" "compare_partitions"
#> [7] "compare_signatures" "consensus_heatmap" "dimension_reduction"
#> [10] "functional_enrichment" "get_anno_col" "get_anno"
#> [13] "get_classes" "get_consensus" "get_matrix"
#> [16] "get_membership" "get_param" "get_signatures"
#> [19] "get_stats" "is_best_k" "is_stable_k"
#> [22] "membership_heatmap" "ncol" "nrow"
#> [25] "plot_ecdf" "predict_classes" "rownames"
#> [28] "select_partition_number" "show" "suggest_best_k"
#> [31] "test_to_known_factors" "top_rows_heatmap"
collect_plots() function collects all the plots made from res for all k (number of subgroups)
into one single page to provide an easy and fast comparison between different k.
collect_plots(res)
The plots are:
k and the heatmap of
predicted classes for each k.k.k.k.All the plots in panels can be made by individual functions and they are plotted later in this section.
select_partition_number() produces several plots showing different
statistics for choosing “optimized” k. There are following statistics:
k;k, the area increased is defined as \(A_k - A_{k-1}\).The detailed explanations of these statistics can be found in the cola vignette.
Generally speaking, higher 1-PAC score, higher mean silhouette score or higher
concordance corresponds to better partition. Rand index and Jaccard index
measure how similar the current partition is compared to partition with k-1.
If they are too similar, we won't accept k is better than k-1.
select_partition_number(res)
The numeric values for all these statistics can be obtained by get_stats().
get_stats(res)
#> k 1-PAC mean_silhouette concordance area_increased Rand Jaccard
#> 2 2 1.000 0.980 0.992 0.502 0.498 0.498
#> 3 3 0.884 0.909 0.958 0.305 0.767 0.566
#> 4 4 0.971 0.944 0.977 0.134 0.790 0.482
suggest_best_k() suggests the best \(k\) based on these statistics. The rules are as follows:
suggest_best_k(res)
#> [1] 4
#> attr(,"optional")
#> [1] 2
There is also optional best \(k\) = 2 that is worth to check.
Following is the table of the partitions (You need to click the show/hide
code output link to see it). The membership matrix (columns with name p*)
is inferred by
clue::cl_consensus()
function with the SE method. Basically the value in the membership matrix
represents the probability to belong to a certain group. The finall subgroup
label for an item is determined with the group with highest probability it
belongs to.
In get_classes() function, the entropy is calculated from the membership
matrix and the silhouette score is calculated from the consensus matrix.
cbind(get_classes(res, k = 2), get_membership(res, k = 2))
#> class entropy silhouette p1 p2
#> HSPC_001 2 0.000 0.994 0.00 1.00
#> HSPC_003 1 0.827 0.651 0.74 0.26
#> HSPC_016 2 0.000 0.994 0.00 1.00
#> HSPC_034 1 0.000 0.990 1.00 0.00
#> HSPC_036 1 0.000 0.990 1.00 0.00
#> Prog_007 2 0.242 0.954 0.04 0.96
#> Prog_013 1 0.000 0.990 1.00 0.00
#> Prog_002 1 0.000 0.990 1.00 0.00
#> Prog_015 1 0.000 0.990 1.00 0.00
#> Prog_027 2 0.000 0.994 0.00 1.00
#> Prog_003 2 0.000 0.994 0.00 1.00
#> Prog_017 1 0.000 0.990 1.00 0.00
#> Prog_023 2 0.000 0.994 0.00 1.00
#> HSPC_053 1 0.000 0.990 1.00 0.00
#> HSPC_077 1 0.000 0.990 1.00 0.00
#> Prog_055 1 0.000 0.990 1.00 0.00
#> Prog_050 1 0.000 0.990 1.00 0.00
#> Prog_056 2 0.000 0.994 0.00 1.00
#> Prog_069 2 0.000 0.994 0.00 1.00
#> Prog_075 1 0.000 0.990 1.00 0.00
#> Prog_059 2 0.000 0.994 0.00 1.00
#> Prog_071 2 0.000 0.994 0.00 1.00
#> Prog_077 2 0.000 0.994 0.00 1.00
#> Prog_083 1 0.000 0.990 1.00 0.00
#> Prog_047 1 0.000 0.990 1.00 0.00
#> HSPC_094 2 0.000 0.994 0.00 1.00
#> HSPC_101 1 0.000 0.990 1.00 0.00
#> HSPC_102 1 0.000 0.990 1.00 0.00
#> HSPC_090 2 0.000 0.994 0.00 1.00
#> Prog_097 1 0.000 0.990 1.00 0.00
#> Prog_103 2 0.000 0.994 0.00 1.00
#> Prog_085 2 0.000 0.994 0.00 1.00
#> Prog_116 2 0.000 0.994 0.00 1.00
#> Prog_093 2 0.000 0.994 0.00 1.00
#> Prog_099 2 0.000 0.994 0.00 1.00
#> Prog_105 1 0.000 0.990 1.00 0.00
#> Prog_123 1 0.000 0.990 1.00 0.00
#> Prog_087 1 0.000 0.990 1.00 0.00
#> Prog_113 2 0.000 0.994 0.00 1.00
#> HSPC_138 2 0.000 0.994 0.00 1.00
#> HSPC_156 2 0.000 0.994 0.00 1.00
#> Prog_133 1 0.000 0.990 1.00 0.00
#> Prog_145 1 0.000 0.990 1.00 0.00
#> Prog_157 2 0.000 0.994 0.00 1.00
#> Prog_128 1 0.000 0.990 1.00 0.00
#> Prog_153 2 0.000 0.994 0.00 1.00
#> Prog_137 2 0.000 0.994 0.00 1.00
#> Prog_155 1 0.000 0.990 1.00 0.00
#> Prog_167 1 0.000 0.990 1.00 0.00
#> HSPC_206 2 0.000 0.994 0.00 1.00
#> HSPC_195 1 0.000 0.990 1.00 0.00
#> LT-HSC_052 2 0.000 0.994 0.00 1.00
#> HSPC_172 2 0.000 0.994 0.00 1.00
#> HSPC_179 2 0.000 0.994 0.00 1.00
#> Prog_176 2 0.000 0.994 0.00 1.00
#> Prog_206 2 0.000 0.994 0.00 1.00
#> Prog_189 2 0.000 0.994 0.00 1.00
#> Prog_190 1 0.000 0.990 1.00 0.00
#> Prog_186 2 0.000 0.994 0.00 1.00
#> Prog_192 1 0.000 0.990 1.00 0.00
#> HSPC_214 1 0.000 0.990 1.00 0.00
#> HSPC_216 1 0.000 0.990 1.00 0.00
#> Prog_218 2 0.000 0.994 0.00 1.00
#> Prog_236 1 0.000 0.990 1.00 0.00
#> LT-HSC_068 2 0.000 0.994 0.00 1.00
#> Prog_238 1 0.000 0.990 1.00 0.00
#> Prog_233 2 0.000 0.994 0.00 1.00
#> Prog_245 1 0.000 0.990 1.00 0.00
#> Prog_234 1 0.000 0.990 1.00 0.00
#> Prog_240 2 0.000 0.994 0.00 1.00
#> LT-HSC_072 1 0.000 0.990 1.00 0.00
#> HSPC_285 1 0.000 0.990 1.00 0.00
#> HSPC_268 1 0.000 0.990 1.00 0.00
#> HSPC_282 1 0.000 0.990 1.00 0.00
#> HSPC_288 1 0.000 0.990 1.00 0.00
#> HSPC_258 2 0.000 0.994 0.00 1.00
#> Prog_260 2 0.000 0.994 0.00 1.00
#> Prog_266 2 0.000 0.994 0.00 1.00
#> Prog_272 2 0.000 0.994 0.00 1.00
#> LT-HSC_081 2 0.000 0.994 0.00 1.00
#> Prog_255 1 0.000 0.990 1.00 0.00
#> Prog_262 2 0.000 0.994 0.00 1.00
#> Prog_268 2 0.000 0.994 0.00 1.00
#> Prog_292 2 0.000 0.994 0.00 1.00
#> Prog_275 2 0.000 0.994 0.00 1.00
#> Prog_276 1 0.000 0.990 1.00 0.00
#> Prog_294 2 0.000 0.994 0.00 1.00
#> HSPC_332 1 0.000 0.990 1.00 0.00
#> HSPC_303 2 0.000 0.994 0.00 1.00
#> HSPC_327 1 0.000 0.990 1.00 0.00
#> HSPC_333 1 0.000 0.990 1.00 0.00
#> HSPC_300 2 0.000 0.994 0.00 1.00
#> Prog_325 1 0.000 0.990 1.00 0.00
#> Prog_331 1 0.000 0.990 1.00 0.00
#> Prog_308 2 0.000 0.994 0.00 1.00
#> Prog_320 2 0.141 0.974 0.02 0.98
#> Prog_332 2 0.000 0.994 0.00 1.00
#> Prog_296 2 0.000 0.994 0.00 1.00
#> Prog_327 1 0.000 0.990 1.00 0.00
#> Prog_304 1 0.000 0.990 1.00 0.00
#> LT-HSC_096 1 0.000 0.990 1.00 0.00
#> HSPC_346 1 0.000 0.990 1.00 0.00
#> HSPC_353 1 0.000 0.990 1.00 0.00
#> HSPC_371 1 0.000 0.990 1.00 0.00
#> HSPC_341 2 0.000 0.994 0.00 1.00
#> Prog_338 2 0.000 0.994 0.00 1.00
#> Prog_371 1 0.000 0.990 1.00 0.00
#> Prog_341 1 0.000 0.990 1.00 0.00
#> LT-HSC_108 1 0.000 0.990 1.00 0.00
#> HSPC_410 1 0.000 0.990 1.00 0.00
#> HSPC_411 1 0.000 0.990 1.00 0.00
#> HSPC_417 2 0.990 0.208 0.44 0.56
#> HSPC_423 2 0.000 0.994 0.00 1.00
#> HSPC_388 2 0.000 0.994 0.00 1.00
#> HSPC_382 2 0.000 0.994 0.00 1.00
#> HSPC_420 2 0.000 0.994 0.00 1.00
#> Prog_392 2 0.000 0.994 0.00 1.00
#> Prog_399 2 0.000 0.994 0.00 1.00
#> Prog_405 2 0.000 0.994 0.00 1.00
#> Prog_412 1 0.000 0.990 1.00 0.00
#> Prog_413 1 0.000 0.990 1.00 0.00
#> Prog_420 1 0.000 0.990 1.00 0.00
#> Prog_426 1 0.000 0.990 1.00 0.00
#> HSPC_442 2 0.000 0.994 0.00 1.00
#> HSPC_456 2 0.000 0.994 0.00 1.00
#> LT-HSC_115 2 0.000 0.994 0.00 1.00
#> Prog_428 2 0.000 0.994 0.00 1.00
#> Prog_441 1 0.000 0.990 1.00 0.00
#> Prog_447 2 0.000 0.994 0.00 1.00
#> Prog_436 2 0.000 0.994 0.00 1.00
#> Prog_450 2 0.000 0.994 0.00 1.00
#> Prog_456 2 0.000 0.994 0.00 1.00
#> HSPC_477 2 0.000 0.994 0.00 1.00
#> HSPC_485 1 0.000 0.990 1.00 0.00
#> HSPC_503 1 0.000 0.990 1.00 0.00
#> Prog_493 2 0.000 0.994 0.00 1.00
#> Prog_499 1 0.000 0.990 1.00 0.00
#> Prog_476 1 0.000 0.990 1.00 0.00
#> Prog_482 2 0.000 0.994 0.00 1.00
#> Prog_506 1 0.000 0.990 1.00 0.00
#> Prog_470 1 0.000 0.990 1.00 0.00
#> Prog_489 1 0.000 0.990 1.00 0.00
#> Prog_501 2 0.000 0.994 0.00 1.00
#> Prog_471 2 0.000 0.994 0.00 1.00
#> Prog_484 2 0.000 0.994 0.00 1.00
#> Prog_479 2 0.000 0.994 0.00 1.00
#> Prog_473 2 0.000 0.994 0.00 1.00
#> Prog_486 1 0.000 0.990 1.00 0.00
#> Prog_504 1 0.000 0.990 1.00 0.00
#> HSPC_544 1 0.000 0.990 1.00 0.00
#> HSPC_527 2 0.000 0.994 0.00 1.00
#> Prog_530 1 0.000 0.990 1.00 0.00
#> Prog_550 1 0.943 0.441 0.64 0.36
#> LT-HSC_142 1 0.000 0.990 1.00 0.00
#> Prog_514 2 0.000 0.994 0.00 1.00
#> Prog_521 1 0.981 0.281 0.58 0.42
#> Prog_527 1 0.000 0.990 1.00 0.00
#> Prog_551 1 0.000 0.990 1.00 0.00
#> HSPC_574 1 0.000 0.990 1.00 0.00
#> Prog_559 2 0.000 0.994 0.00 1.00
#> Prog_565 1 0.680 0.779 0.82 0.18
#> Prog_571 2 0.000 0.994 0.00 1.00
#> Prog_577 1 0.000 0.990 1.00 0.00
#> Prog_560 1 0.000 0.990 1.00 0.00
#> Prog_584 1 0.000 0.990 1.00 0.00
#> Prog_590 2 0.000 0.994 0.00 1.00
#> Prog_567 1 0.000 0.990 1.00 0.00
#> Prog_579 2 0.000 0.994 0.00 1.00
#> Prog_574 1 0.000 0.990 1.00 0.00
#> Prog_581 2 0.000 0.994 0.00 1.00
#> Prog_593 2 0.000 0.994 0.00 1.00
#> Prog_557 2 0.000 0.994 0.00 1.00
#> Prog_582 2 0.000 0.994 0.00 1.00
#> LT-HSC_156 2 0.000 0.994 0.00 1.00
#> Prog_607 1 0.000 0.990 1.00 0.00
#> Prog_626 1 0.000 0.990 1.00 0.00
#> Prog_632 2 0.000 0.994 0.00 1.00
#> Prog_609 1 0.000 0.990 1.00 0.00
#> Prog_621 1 0.000 0.990 1.00 0.00
#> Prog_622 1 0.000 0.990 1.00 0.00
#> Prog_628 1 0.000 0.990 1.00 0.00
#> Prog_598 1 0.000 0.990 1.00 0.00
#> Prog_629 2 0.000 0.994 0.00 1.00
#> Prog_599 2 0.000 0.994 0.00 1.00
#> Prog_618 2 0.000 0.994 0.00 1.00
#> Prog_624 2 0.000 0.994 0.00 1.00
#> Prog_600 2 0.000 0.994 0.00 1.00
#> Prog_650 1 0.000 0.990 1.00 0.00
#> Prog_675 2 0.000 0.994 0.00 1.00
#> Prog_646 2 0.000 0.994 0.00 1.00
#> Prog_652 2 0.000 0.994 0.00 1.00
#> Prog_658 1 0.000 0.990 1.00 0.00
#> Prog_670 1 0.000 0.990 1.00 0.00
#> HSPC_705 1 0.000 0.990 1.00 0.00
#> HSPC_682 1 0.000 0.990 1.00 0.00
#> HSPC_720 1 0.000 0.990 1.00 0.00
#> Prog_685 1 0.000 0.990 1.00 0.00
#> Prog_715 1 0.000 0.990 1.00 0.00
#> Prog_679 2 0.000 0.994 0.00 1.00
#> Prog_680 2 0.000 0.994 0.00 1.00
#> Prog_687 1 0.000 0.990 1.00 0.00
#> Prog_693 2 0.000 0.994 0.00 1.00
#> Prog_699 1 0.000 0.990 1.00 0.00
#> Prog_705 1 0.000 0.990 1.00 0.00
#> Prog_717 1 0.000 0.990 1.00 0.00
#> Prog_718 2 0.000 0.994 0.00 1.00
#> LT-HSC_192 2 0.000 0.994 0.00 1.00
#> HSPC_734 1 0.000 0.990 1.00 0.00
#> HSPC_737 1 0.000 0.990 1.00 0.00
#> Prog_727 1 0.000 0.990 1.00 0.00
#> Prog_735 1 0.000 0.990 1.00 0.00
#> Prog_759 1 0.000 0.990 1.00 0.00
#> Prog_760 2 0.000 0.994 0.00 1.00
#> Prog_743 1 0.000 0.990 1.00 0.00
#> HSPC_796 1 0.000 0.990 1.00 0.00
#> HSPC_766 2 0.000 0.994 0.00 1.00
#> HSPC_767 2 0.000 0.994 0.00 1.00
#> Prog_769 2 0.000 0.994 0.00 1.00
#> Prog_781 2 0.000 0.994 0.00 1.00
#> Prog_763 2 0.000 0.994 0.00 1.00
#> Prog_782 2 0.000 0.994 0.00 1.00
#> Prog_794 2 0.141 0.974 0.02 0.98
#> Prog_800 2 0.000 0.994 0.00 1.00
#> Prog_764 2 0.000 0.994 0.00 1.00
#> Prog_777 1 0.000 0.990 1.00 0.00
#> Prog_789 1 0.000 0.990 1.00 0.00
#> Prog_795 1 0.141 0.970 0.98 0.02
#> Prog_772 2 0.000 0.994 0.00 1.00
#> Prog_791 1 0.000 0.990 1.00 0.00
#> Prog_774 1 0.000 0.990 1.00 0.00
#> Prog_804 1 0.000 0.990 1.00 0.00
#> Prog_768 2 0.000 0.994 0.00 1.00
#> HSPC_812 2 0.000 0.994 0.00 1.00
#> HSPC_813 2 0.000 0.994 0.00 1.00
#> HSPC_807 1 0.000 0.990 1.00 0.00
#> HSPC_820 2 0.000 0.994 0.00 1.00
#> HSPC_808 2 0.795 0.681 0.24 0.76
#> HSPC_833 2 0.141 0.974 0.02 0.98
#> Prog_829 1 0.000 0.990 1.00 0.00
#> Prog_847 2 0.000 0.994 0.00 1.00
#> Prog_824 2 0.000 0.994 0.00 1.00
#> Prog_832 1 0.000 0.990 1.00 0.00
#> Prog_808 1 0.000 0.990 1.00 0.00
#> Prog_833 2 0.000 0.994 0.00 1.00
#> Prog_816 2 0.000 0.994 0.00 1.00
#> Prog_834 1 0.000 0.990 1.00 0.00
#> Prog_840 1 0.000 0.990 1.00 0.00
#> Prog_846 1 0.000 0.990 1.00 0.00
cbind(get_classes(res, k = 3), get_membership(res, k = 3))
#> class entropy silhouette p1 p2 p3
#> HSPC_001 2 0.0000 0.9587 0.00 1.00 0.00
#> HSPC_003 3 0.6956 0.5572 0.04 0.30 0.66
#> HSPC_016 2 0.0000 0.9587 0.00 1.00 0.00
#> HSPC_034 3 0.2537 0.8778 0.08 0.00 0.92
#> HSPC_036 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_007 3 0.0000 0.9254 0.00 0.00 1.00
#> Prog_013 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_002 1 0.3686 0.8138 0.86 0.00 0.14
#> Prog_015 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_027 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_003 3 0.1529 0.9078 0.00 0.04 0.96
#> Prog_017 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_023 2 0.0000 0.9587 0.00 1.00 0.00
#> HSPC_053 1 0.0000 0.9677 1.00 0.00 0.00
#> HSPC_077 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_055 3 0.0000 0.9254 0.00 0.00 1.00
#> Prog_050 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_056 3 0.0000 0.9254 0.00 0.00 1.00
#> Prog_069 2 0.4555 0.7712 0.00 0.80 0.20
#> Prog_075 1 0.0892 0.9529 0.98 0.00 0.02
#> Prog_059 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_071 2 0.2537 0.8972 0.00 0.92 0.08
#> Prog_077 3 0.1529 0.9078 0.00 0.04 0.96
#> Prog_083 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_047 3 0.0000 0.9254 0.00 0.00 1.00
#> HSPC_094 2 0.0000 0.9587 0.00 1.00 0.00
#> HSPC_101 1 0.0000 0.9677 1.00 0.00 0.00
#> HSPC_102 3 0.4555 0.7655 0.20 0.00 0.80
#> HSPC_090 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_097 1 0.3686 0.8241 0.86 0.00 0.14
#> Prog_103 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_085 2 0.5397 0.6544 0.00 0.72 0.28
#> Prog_116 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_093 2 0.4796 0.7454 0.00 0.78 0.22
#> Prog_099 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_105 3 0.4796 0.7392 0.22 0.00 0.78
#> Prog_123 3 0.4555 0.7655 0.20 0.00 0.80
#> Prog_087 3 0.4555 0.7655 0.20 0.00 0.80
#> Prog_113 3 0.0000 0.9254 0.00 0.00 1.00
#> HSPC_138 2 0.0000 0.9587 0.00 1.00 0.00
#> HSPC_156 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_133 1 0.1529 0.9372 0.96 0.00 0.04
#> Prog_145 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_157 2 0.4555 0.7712 0.00 0.80 0.20
#> Prog_128 3 0.4555 0.7655 0.20 0.00 0.80
#> Prog_153 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_137 2 0.5216 0.6872 0.00 0.74 0.26
#> Prog_155 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_167 1 0.0000 0.9677 1.00 0.00 0.00
#> HSPC_206 3 0.6126 0.3197 0.00 0.40 0.60
#> HSPC_195 1 0.0000 0.9677 1.00 0.00 0.00
#> LT-HSC_052 2 0.0000 0.9587 0.00 1.00 0.00
#> HSPC_172 2 0.0000 0.9587 0.00 1.00 0.00
#> HSPC_179 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_176 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_206 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_189 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_190 1 0.1529 0.9372 0.96 0.00 0.04
#> Prog_186 3 0.0000 0.9254 0.00 0.00 1.00
#> Prog_192 1 0.0000 0.9677 1.00 0.00 0.00
#> HSPC_214 3 0.5016 0.7125 0.24 0.00 0.76
#> HSPC_216 1 0.0892 0.9512 0.98 0.00 0.02
#> Prog_218 3 0.2066 0.8907 0.00 0.06 0.94
#> Prog_236 1 0.0892 0.9512 0.98 0.00 0.02
#> LT-HSC_068 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_238 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_233 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_245 3 0.0000 0.9254 0.00 0.00 1.00
#> Prog_234 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_240 2 0.0000 0.9587 0.00 1.00 0.00
#> LT-HSC_072 1 0.0000 0.9677 1.00 0.00 0.00
#> HSPC_285 3 0.6309 0.0955 0.50 0.00 0.50
#> HSPC_268 1 0.0000 0.9677 1.00 0.00 0.00
#> HSPC_282 1 0.4555 0.7368 0.80 0.20 0.00
#> HSPC_288 1 0.0000 0.9677 1.00 0.00 0.00
#> HSPC_258 3 0.1529 0.9078 0.00 0.04 0.96
#> Prog_260 3 0.0000 0.9254 0.00 0.00 1.00
#> Prog_266 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_272 2 0.4555 0.7712 0.00 0.80 0.20
#> LT-HSC_081 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_255 1 0.5948 0.4010 0.64 0.00 0.36
#> Prog_262 3 0.0000 0.9254 0.00 0.00 1.00
#> Prog_268 3 0.0000 0.9254 0.00 0.00 1.00
#> Prog_292 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_275 3 0.0000 0.9254 0.00 0.00 1.00
#> Prog_276 1 0.4555 0.7368 0.80 0.20 0.00
#> Prog_294 2 0.2537 0.8976 0.00 0.92 0.08
#> HSPC_332 3 0.0000 0.9254 0.00 0.00 1.00
#> HSPC_303 2 0.0000 0.9587 0.00 1.00 0.00
#> HSPC_327 1 0.0000 0.9677 1.00 0.00 0.00
#> HSPC_333 1 0.0000 0.9677 1.00 0.00 0.00
#> HSPC_300 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_325 3 0.0000 0.9254 0.00 0.00 1.00
#> Prog_331 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_308 3 0.0000 0.9254 0.00 0.00 1.00
#> Prog_320 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_332 2 0.2537 0.8972 0.00 0.92 0.08
#> Prog_296 2 0.5216 0.6872 0.00 0.74 0.26
#> Prog_327 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_304 3 0.0000 0.9254 0.00 0.00 1.00
#> LT-HSC_096 1 0.0000 0.9677 1.00 0.00 0.00
#> HSPC_346 1 0.0000 0.9677 1.00 0.00 0.00
#> HSPC_353 1 0.0000 0.9677 1.00 0.00 0.00
#> HSPC_371 1 0.0000 0.9677 1.00 0.00 0.00
#> HSPC_341 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_338 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_371 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_341 1 0.0000 0.9677 1.00 0.00 0.00
#> LT-HSC_108 1 0.1529 0.9372 0.96 0.00 0.04
#> HSPC_410 1 0.0000 0.9677 1.00 0.00 0.00
#> HSPC_411 1 0.0000 0.9677 1.00 0.00 0.00
#> HSPC_417 2 0.0000 0.9587 0.00 1.00 0.00
#> HSPC_423 2 0.0000 0.9587 0.00 1.00 0.00
#> HSPC_388 2 0.0000 0.9587 0.00 1.00 0.00
#> HSPC_382 2 0.0000 0.9587 0.00 1.00 0.00
#> HSPC_420 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_392 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_399 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_405 3 0.1529 0.9078 0.00 0.04 0.96
#> Prog_412 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_413 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_420 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_426 1 0.1529 0.9372 0.96 0.00 0.04
#> HSPC_442 2 0.0000 0.9587 0.00 1.00 0.00
#> HSPC_456 2 0.0000 0.9587 0.00 1.00 0.00
#> LT-HSC_115 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_428 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_441 1 0.1529 0.9372 0.96 0.00 0.04
#> Prog_447 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_436 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_450 2 0.5706 0.5812 0.00 0.68 0.32
#> Prog_456 2 0.0000 0.9587 0.00 1.00 0.00
#> HSPC_477 2 0.0000 0.9587 0.00 1.00 0.00
#> HSPC_485 1 0.0000 0.9677 1.00 0.00 0.00
#> HSPC_503 1 0.4291 0.7632 0.82 0.18 0.00
#> Prog_493 3 0.0000 0.9254 0.00 0.00 1.00
#> Prog_499 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_476 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_482 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_506 3 0.4555 0.7655 0.20 0.00 0.80
#> Prog_470 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_489 1 0.1529 0.9372 0.96 0.00 0.04
#> Prog_501 2 0.1529 0.9279 0.00 0.96 0.04
#> Prog_471 3 0.1529 0.9078 0.00 0.04 0.96
#> Prog_484 3 0.0000 0.9254 0.00 0.00 1.00
#> Prog_479 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_473 3 0.1529 0.9078 0.00 0.04 0.96
#> Prog_486 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_504 1 0.0000 0.9677 1.00 0.00 0.00
#> HSPC_544 1 0.0000 0.9677 1.00 0.00 0.00
#> HSPC_527 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_530 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_550 2 0.4551 0.7956 0.14 0.84 0.02
#> LT-HSC_142 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_514 3 0.0000 0.9254 0.00 0.00 1.00
#> Prog_521 3 0.0000 0.9254 0.00 0.00 1.00
#> Prog_527 3 0.0000 0.9254 0.00 0.00 1.00
#> Prog_551 1 0.0000 0.9677 1.00 0.00 0.00
#> HSPC_574 3 0.0892 0.9176 0.02 0.00 0.98
#> Prog_559 2 0.2414 0.9145 0.04 0.94 0.02
#> Prog_565 2 0.4555 0.7323 0.20 0.80 0.00
#> Prog_571 2 0.4796 0.7454 0.00 0.78 0.22
#> Prog_577 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_560 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_584 3 0.0000 0.9254 0.00 0.00 1.00
#> Prog_590 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_567 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_579 3 0.0000 0.9254 0.00 0.00 1.00
#> Prog_574 3 0.4555 0.7655 0.20 0.00 0.80
#> Prog_581 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_593 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_557 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_582 3 0.1529 0.9078 0.00 0.04 0.96
#> LT-HSC_156 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_607 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_626 1 0.1529 0.9372 0.96 0.00 0.04
#> Prog_632 2 0.5948 0.4972 0.00 0.64 0.36
#> Prog_609 2 0.2537 0.8825 0.08 0.92 0.00
#> Prog_621 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_622 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_628 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_598 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_629 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_599 2 0.4796 0.7454 0.00 0.78 0.22
#> Prog_618 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_624 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_600 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_650 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_675 3 0.0000 0.9254 0.00 0.00 1.00
#> Prog_646 3 0.1529 0.9078 0.00 0.04 0.96
#> Prog_652 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_658 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_670 3 0.5016 0.7106 0.24 0.00 0.76
#> HSPC_705 1 0.0000 0.9677 1.00 0.00 0.00
#> HSPC_682 1 0.0000 0.9677 1.00 0.00 0.00
#> HSPC_720 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_685 1 0.4291 0.7674 0.82 0.00 0.18
#> Prog_715 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_679 3 0.1529 0.9078 0.00 0.04 0.96
#> Prog_680 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_687 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_693 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_699 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_705 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_717 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_718 3 0.1529 0.9078 0.00 0.04 0.96
#> LT-HSC_192 2 0.0000 0.9587 0.00 1.00 0.00
#> HSPC_734 1 0.0000 0.9677 1.00 0.00 0.00
#> HSPC_737 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_727 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_735 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_759 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_760 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_743 1 0.0000 0.9677 1.00 0.00 0.00
#> HSPC_796 1 0.0000 0.9677 1.00 0.00 0.00
#> HSPC_766 2 0.0000 0.9587 0.00 1.00 0.00
#> HSPC_767 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_769 3 0.1529 0.9078 0.00 0.04 0.96
#> Prog_781 3 0.1529 0.9078 0.00 0.04 0.96
#> Prog_763 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_782 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_794 1 0.6302 0.0669 0.52 0.48 0.00
#> Prog_800 3 0.0000 0.9254 0.00 0.00 1.00
#> Prog_764 2 0.2066 0.9119 0.00 0.94 0.06
#> Prog_777 3 0.0000 0.9254 0.00 0.00 1.00
#> Prog_789 3 0.0000 0.9254 0.00 0.00 1.00
#> Prog_795 3 0.0892 0.9168 0.02 0.00 0.98
#> Prog_772 3 0.0000 0.9254 0.00 0.00 1.00
#> Prog_791 3 0.4796 0.7392 0.22 0.00 0.78
#> Prog_774 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_804 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_768 2 0.0000 0.9587 0.00 1.00 0.00
#> HSPC_812 2 0.0000 0.9587 0.00 1.00 0.00
#> HSPC_813 2 0.0000 0.9587 0.00 1.00 0.00
#> HSPC_807 1 0.0000 0.9677 1.00 0.00 0.00
#> HSPC_820 2 0.0000 0.9587 0.00 1.00 0.00
#> HSPC_808 2 0.0892 0.9411 0.02 0.98 0.00
#> HSPC_833 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_829 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_847 3 0.0000 0.9254 0.00 0.00 1.00
#> Prog_824 3 0.0000 0.9254 0.00 0.00 1.00
#> Prog_832 1 0.1529 0.9372 0.96 0.00 0.04
#> Prog_808 1 0.6244 0.2326 0.56 0.44 0.00
#> Prog_833 2 0.0000 0.9587 0.00 1.00 0.00
#> Prog_816 3 0.0000 0.9254 0.00 0.00 1.00
#> Prog_834 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_840 1 0.0000 0.9677 1.00 0.00 0.00
#> Prog_846 1 0.0000 0.9677 1.00 0.00 0.00
cbind(get_classes(res, k = 4), get_membership(res, k = 4))
#> class entropy silhouette p1 p2 p3 p4
#> HSPC_001 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> HSPC_003 2 0.2345 0.881 0.00 0.90 0.10 0.00
#> HSPC_016 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> HSPC_034 1 0.4855 0.302 0.60 0.00 0.40 0.00
#> HSPC_036 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> Prog_007 3 0.0000 0.958 0.00 0.00 1.00 0.00
#> Prog_013 1 0.4134 0.648 0.74 0.26 0.00 0.00
#> Prog_002 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> Prog_015 1 0.0707 0.955 0.98 0.02 0.00 0.00
#> Prog_027 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> Prog_003 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> Prog_017 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> Prog_023 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> HSPC_053 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> HSPC_077 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> Prog_055 3 0.0000 0.958 0.00 0.00 1.00 0.00
#> Prog_050 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> Prog_056 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> Prog_069 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> Prog_075 3 0.4855 0.363 0.40 0.00 0.60 0.00
#> Prog_059 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> Prog_071 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> Prog_077 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> Prog_083 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> Prog_047 3 0.0000 0.958 0.00 0.00 1.00 0.00
#> HSPC_094 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> HSPC_101 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> HSPC_102 3 0.0000 0.958 0.00 0.00 1.00 0.00
#> HSPC_090 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> Prog_097 3 0.0000 0.958 0.00 0.00 1.00 0.00
#> Prog_103 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> Prog_085 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> Prog_116 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> Prog_093 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> Prog_099 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> Prog_105 3 0.0000 0.958 0.00 0.00 1.00 0.00
#> Prog_123 3 0.0000 0.958 0.00 0.00 1.00 0.00
#> Prog_087 3 0.0000 0.958 0.00 0.00 1.00 0.00
#> Prog_113 3 0.0000 0.958 0.00 0.00 1.00 0.00
#> HSPC_138 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> HSPC_156 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> Prog_133 3 0.0000 0.958 0.00 0.00 1.00 0.00
#> Prog_145 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> Prog_157 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> Prog_128 3 0.0000 0.958 0.00 0.00 1.00 0.00
#> Prog_153 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> Prog_137 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> Prog_155 3 0.4948 0.241 0.44 0.00 0.56 0.00
#> Prog_167 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> HSPC_206 3 0.0000 0.958 0.00 0.00 1.00 0.00
#> HSPC_195 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> LT-HSC_052 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> HSPC_172 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> HSPC_179 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> Prog_176 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> Prog_206 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> Prog_189 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> Prog_190 1 0.3975 0.670 0.76 0.00 0.24 0.00
#> Prog_186 3 0.0000 0.958 0.00 0.00 1.00 0.00
#> Prog_192 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> HSPC_214 1 0.1411 0.942 0.96 0.00 0.02 0.02
#> HSPC_216 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> Prog_218 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> Prog_236 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> LT-HSC_068 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> Prog_238 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> Prog_233 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> Prog_245 3 0.0000 0.958 0.00 0.00 1.00 0.00
#> Prog_234 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> Prog_240 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> LT-HSC_072 3 0.4977 0.176 0.46 0.00 0.54 0.00
#> HSPC_285 1 0.2011 0.896 0.92 0.00 0.08 0.00
#> HSPC_268 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> HSPC_282 2 0.3400 0.774 0.18 0.82 0.00 0.00
#> HSPC_288 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> HSPC_258 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> Prog_260 4 0.4277 0.606 0.00 0.00 0.28 0.72
#> Prog_266 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> Prog_272 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> LT-HSC_081 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> Prog_255 3 0.2345 0.864 0.10 0.00 0.90 0.00
#> Prog_262 3 0.0000 0.958 0.00 0.00 1.00 0.00
#> Prog_268 3 0.0000 0.958 0.00 0.00 1.00 0.00
#> Prog_292 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> Prog_275 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> Prog_276 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> Prog_294 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> HSPC_332 3 0.0000 0.958 0.00 0.00 1.00 0.00
#> HSPC_303 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> HSPC_327 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> HSPC_333 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> HSPC_300 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> Prog_325 3 0.0000 0.958 0.00 0.00 1.00 0.00
#> Prog_331 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> Prog_308 3 0.0000 0.958 0.00 0.00 1.00 0.00
#> Prog_320 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> Prog_332 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> Prog_296 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> Prog_327 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> Prog_304 3 0.0000 0.958 0.00 0.00 1.00 0.00
#> LT-HSC_096 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> HSPC_346 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> HSPC_353 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> HSPC_371 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> HSPC_341 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> Prog_338 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> Prog_371 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> Prog_341 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> LT-HSC_108 3 0.0000 0.958 0.00 0.00 1.00 0.00
#> HSPC_410 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> HSPC_411 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> HSPC_417 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> HSPC_423 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> HSPC_388 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> HSPC_382 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> HSPC_420 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> Prog_392 2 0.3172 0.805 0.00 0.84 0.00 0.16
#> Prog_399 2 0.2647 0.858 0.00 0.88 0.00 0.12
#> Prog_405 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> Prog_412 1 0.4277 0.615 0.72 0.00 0.00 0.28
#> Prog_413 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> Prog_420 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> Prog_426 3 0.0000 0.958 0.00 0.00 1.00 0.00
#> HSPC_442 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> HSPC_456 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> LT-HSC_115 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> Prog_428 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> Prog_441 3 0.0000 0.958 0.00 0.00 1.00 0.00
#> Prog_447 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> Prog_436 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> Prog_450 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> Prog_456 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> HSPC_477 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> HSPC_485 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> HSPC_503 2 0.1211 0.939 0.04 0.96 0.00 0.00
#> Prog_493 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> Prog_499 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> Prog_476 2 0.4855 0.320 0.40 0.60 0.00 0.00
#> Prog_482 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> Prog_506 3 0.0000 0.958 0.00 0.00 1.00 0.00
#> Prog_470 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> Prog_489 3 0.1211 0.922 0.04 0.00 0.96 0.00
#> Prog_501 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> Prog_471 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> Prog_484 3 0.0000 0.958 0.00 0.00 1.00 0.00
#> Prog_479 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> Prog_473 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> Prog_486 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> Prog_504 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> HSPC_544 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> HSPC_527 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> Prog_530 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> Prog_550 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> LT-HSC_142 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> Prog_514 3 0.0000 0.958 0.00 0.00 1.00 0.00
#> Prog_521 3 0.0000 0.958 0.00 0.00 1.00 0.00
#> Prog_527 3 0.4624 0.498 0.34 0.00 0.66 0.00
#> Prog_551 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> HSPC_574 1 0.2345 0.874 0.90 0.00 0.10 0.00
#> Prog_559 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> Prog_565 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> Prog_571 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> Prog_577 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> Prog_560 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> Prog_584 3 0.0000 0.958 0.00 0.00 1.00 0.00
#> Prog_590 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> Prog_567 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> Prog_579 3 0.0000 0.958 0.00 0.00 1.00 0.00
#> Prog_574 3 0.0000 0.958 0.00 0.00 1.00 0.00
#> Prog_581 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> Prog_593 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> Prog_557 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> Prog_582 4 0.1637 0.925 0.00 0.00 0.06 0.94
#> LT-HSC_156 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> Prog_607 1 0.1211 0.938 0.96 0.00 0.00 0.04
#> Prog_626 3 0.0000 0.958 0.00 0.00 1.00 0.00
#> Prog_632 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> Prog_609 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> Prog_621 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> Prog_622 1 0.0707 0.956 0.98 0.00 0.00 0.02
#> Prog_628 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> Prog_598 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> Prog_629 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> Prog_599 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> Prog_618 4 0.4713 0.430 0.00 0.36 0.00 0.64
#> Prog_624 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> Prog_600 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> Prog_650 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> Prog_675 3 0.0000 0.958 0.00 0.00 1.00 0.00
#> Prog_646 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> Prog_652 4 0.0707 0.966 0.00 0.02 0.00 0.98
#> Prog_658 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> Prog_670 3 0.0000 0.958 0.00 0.00 1.00 0.00
#> HSPC_705 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> HSPC_682 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> HSPC_720 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> Prog_685 3 0.0000 0.958 0.00 0.00 1.00 0.00
#> Prog_715 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> Prog_679 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> Prog_680 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> Prog_687 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> Prog_693 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> Prog_699 1 0.3172 0.803 0.84 0.16 0.00 0.00
#> Prog_705 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> Prog_717 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> Prog_718 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> LT-HSC_192 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> HSPC_734 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> HSPC_737 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> Prog_727 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> Prog_735 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> Prog_759 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> Prog_760 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> Prog_743 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> HSPC_796 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> HSPC_766 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> HSPC_767 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> Prog_769 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> Prog_781 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> Prog_763 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> Prog_782 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> Prog_794 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> Prog_800 3 0.0000 0.958 0.00 0.00 1.00 0.00
#> Prog_764 2 0.3400 0.779 0.00 0.82 0.18 0.00
#> Prog_777 3 0.0000 0.958 0.00 0.00 1.00 0.00
#> Prog_789 3 0.0000 0.958 0.00 0.00 1.00 0.00
#> Prog_795 3 0.1211 0.921 0.00 0.00 0.96 0.04
#> Prog_772 3 0.0000 0.958 0.00 0.00 1.00 0.00
#> Prog_791 3 0.0000 0.958 0.00 0.00 1.00 0.00
#> Prog_774 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> Prog_804 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> Prog_768 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> HSPC_812 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> HSPC_813 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> HSPC_807 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> HSPC_820 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> HSPC_808 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> HSPC_833 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> Prog_829 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> Prog_847 3 0.0000 0.958 0.00 0.00 1.00 0.00
#> Prog_824 3 0.0000 0.958 0.00 0.00 1.00 0.00
#> Prog_832 3 0.0000 0.958 0.00 0.00 1.00 0.00
#> Prog_808 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> Prog_833 2 0.0000 0.980 0.00 1.00 0.00 0.00
#> Prog_816 4 0.0000 0.986 0.00 0.00 0.00 1.00
#> Prog_834 1 0.4277 0.611 0.72 0.28 0.00 0.00
#> Prog_840 1 0.0000 0.974 1.00 0.00 0.00 0.00
#> Prog_846 1 0.0000 0.974 1.00 0.00 0.00 0.00
Heatmaps for the consensus matrix. It visualizes the probability of two samples to be in a same group.
consensus_heatmap(res, k = 2)
consensus_heatmap(res, k = 3)
consensus_heatmap(res, k = 4)
Heatmaps for the membership of samples in all partitions to see how consistent they are:
membership_heatmap(res, k = 2)
membership_heatmap(res, k = 3)
membership_heatmap(res, k = 4)
As soon as the classes for columns are determined, the signatures that are significantly different between subgroups can be looked for. Following are the heatmaps for signatures.
Signature heatmaps where rows are scaled:
Signature heatmaps where rows are not scaled:
get_signatures(res, k = 2, scale_rows = FALSE)
get_signatures(res, k = 3, scale_rows = FALSE)
get_signatures(res, k = 4, scale_rows = FALSE)
Compare the overlap of signatures from different k:
compare_signatures(res)
get_signature() returns a data frame invisibly. To get the list of signatures, the function
call should be assigned to a variable explicitly. In following code, if plot argument is set
to FALSE, no heatmap is plotted while only the differential analysis is performed.
# code only for demonstration
tb = get_signature(res, k = ..., plot = FALSE)
An example of the output of tb is:
#> which_row fdr mean_1 mean_2 scaled_mean_1 scaled_mean_2 km
#> 1 38 0.042760348 8.373488 9.131774 -0.5533452 0.5164555 1
#> 2 40 0.018707592 7.106213 8.469186 -0.6173731 0.5762149 1
#> 3 55 0.019134737 10.221463 11.207825 -0.6159697 0.5749050 1
#> 4 59 0.006059896 5.921854 7.869574 -0.6899429 0.6439467 1
#> 5 60 0.018055526 8.928898 10.211722 -0.6204761 0.5791110 1
#> 6 98 0.009384629 15.714769 14.887706 0.6635654 -0.6193277 2
...
The columns in tb are:
which_row: row indices corresponding to the input matrix.fdr: FDR for the differential test. mean_x: The mean value in group x.scaled_mean_x: The mean value in group x after rows are scaled.km: Row groups if k-means clustering is applied to rows (which is done by automatically selecting number of clusters).If there are too many signatures, top_signatures = ... can be set to only show the
signatures with the highest FDRs:
# code only for demonstration
# e.g. to show the top 500 most significant rows
tb = get_signature(res, k = ..., top_signatures = 500)
If the signatures are defined as these which are uniquely high in current group, diff_method argument
can be set to "uniquely_high_in_one_group":
# code only for demonstration
tb = get_signature(res, k = ..., diff_method = "uniquely_high_in_one_group")
UMAP plot which shows how samples are separated.
dimension_reduction(res, k = 2, method = "UMAP")
dimension_reduction(res, k = 3, method = "UMAP")
dimension_reduction(res, k = 4, method = "UMAP")
Following heatmap shows how subgroups are split when increasing k:
collect_classes(res)
If matrix rows can be associated to genes, consider to use functional_enrichment(res,
...) to perform function enrichment for the signature genes. See this vignette for more detailed explanations.
Parent node: Node012. Child nodes: Node01111-leaf , Node01112-leaf , Node01113-leaf , Node01121-leaf , Node01122-leaf , Node01211-leaf , Node01212-leaf , Node01213-leaf , Node01221-leaf , Node01222-leaf , Node01223-leaf , Node01311-leaf , Node01312-leaf , Node02111-leaf , Node02112-leaf , Node02121-leaf , Node02122-leaf .
The object with results only for a single top-value method and a single partitioning method can be extracted as:
res = res_rh["0121"]
A summary of res and all the functions that can be applied to it:
res
#> A 'ConsensusPartition' object with k = 2, 3, 4.
#> On a matrix with 16820 rows and 124 columns.
#> Top rows (1661) are extracted by 'ATC' method.
#> Subgroups are detected by 'skmeans' method.
#> Performed in total 150 partitions by row resampling.
#> Best k for subgroups seems to be 3.
#>
#> Following methods can be applied to this 'ConsensusPartition' object:
#> [1] "cola_report" "collect_classes" "collect_plots"
#> [4] "collect_stats" "colnames" "compare_partitions"
#> [7] "compare_signatures" "consensus_heatmap" "dimension_reduction"
#> [10] "functional_enrichment" "get_anno_col" "get_anno"
#> [13] "get_classes" "get_consensus" "get_matrix"
#> [16] "get_membership" "get_param" "get_signatures"
#> [19] "get_stats" "is_best_k" "is_stable_k"
#> [22] "membership_heatmap" "ncol" "nrow"
#> [25] "plot_ecdf" "predict_classes" "rownames"
#> [28] "select_partition_number" "show" "suggest_best_k"
#> [31] "test_to_known_factors" "top_rows_heatmap"
collect_plots() function collects all the plots made from res for all k (number of subgroups)
into one single page to provide an easy and fast comparison between different k.
collect_plots(res)
The plots are:
k and the heatmap of
predicted classes for each k.k.k.k.All the plots in panels can be made by individual functions and they are plotted later in this section.
select_partition_number() produces several plots showing different
statistics for choosing “optimized” k. There are following statistics:
k;k, the area increased is defined as \(A_k - A_{k-1}\).The detailed explanations of these statistics can be found in the cola vignette.
Generally speaking, higher 1-PAC score, higher mean silhouette score or higher
concordance corresponds to better partition. Rand index and Jaccard index
measure how similar the current partition is compared to partition with k-1.
If they are too similar, we won't accept k is better than k-1.
select_partition_number(res)
The numeric values for all these statistics can be obtained by get_stats().
get_stats(res)
#> k 1-PAC mean_silhouette concordance area_increased Rand Jaccard
#> 2 2 1.000 0.973 0.990 0.496 0.504 0.504
#> 3 3 0.977 0.957 0.982 0.344 0.749 0.538
#> 4 4 0.723 0.723 0.857 0.111 0.924 0.778
suggest_best_k() suggests the best \(k\) based on these statistics. The rules are as follows:
suggest_best_k(res)
#> [1] 3
#> attr(,"optional")
#> [1] 2
There is also optional best \(k\) = 2 that is worth to check.
Following is the table of the partitions (You need to click the show/hide
code output link to see it). The membership matrix (columns with name p*)
is inferred by
clue::cl_consensus()
function with the SE method. Basically the value in the membership matrix
represents the probability to belong to a certain group. The finall subgroup
label for an item is determined with the group with highest probability it
belongs to.
In get_classes() function, the entropy is calculated from the membership
matrix and the silhouette score is calculated from the consensus matrix.
cbind(get_classes(res, k = 2), get_membership(res, k = 2))
#> class entropy silhouette p1 p2
#> HSPC_003 1 0.000 0.9862 1.00 0.00
#> HSPC_034 1 0.000 0.9862 1.00 0.00
#> HSPC_036 2 0.000 0.9917 0.00 1.00
#> Prog_013 2 0.000 0.9917 0.00 1.00
#> Prog_002 2 0.000 0.9917 0.00 1.00
#> Prog_015 2 0.000 0.9917 0.00 1.00
#> Prog_017 1 0.000 0.9862 1.00 0.00
#> HSPC_053 2 0.000 0.9917 0.00 1.00
#> HSPC_077 2 0.000 0.9917 0.00 1.00
#> Prog_055 1 0.000 0.9862 1.00 0.00
#> Prog_050 1 0.000 0.9862 1.00 0.00
#> Prog_075 1 0.000 0.9862 1.00 0.00
#> Prog_083 2 0.000 0.9917 0.00 1.00
#> Prog_047 1 0.000 0.9862 1.00 0.00
#> HSPC_101 2 0.000 0.9917 0.00 1.00
#> HSPC_102 1 0.000 0.9862 1.00 0.00
#> Prog_097 1 0.000 0.9862 1.00 0.00
#> Prog_105 1 0.000 0.9862 1.00 0.00
#> Prog_123 1 0.000 0.9862 1.00 0.00
#> Prog_087 1 0.000 0.9862 1.00 0.00
#> Prog_133 1 0.000 0.9862 1.00 0.00
#> Prog_145 2 0.141 0.9730 0.02 0.98
#> Prog_128 1 0.000 0.9862 1.00 0.00
#> Prog_155 1 0.000 0.9862 1.00 0.00
#> Prog_167 2 0.000 0.9917 0.00 1.00
#> HSPC_195 2 0.000 0.9917 0.00 1.00
#> Prog_190 1 0.000 0.9862 1.00 0.00
#> Prog_192 1 0.000 0.9862 1.00 0.00
#> HSPC_214 1 0.971 0.3372 0.60 0.40
#> HSPC_216 2 0.000 0.9917 0.00 1.00
#> Prog_236 2 0.999 0.0587 0.48 0.52
#> Prog_238 1 0.000 0.9862 1.00 0.00
#> Prog_245 1 0.000 0.9862 1.00 0.00
#> Prog_234 2 0.000 0.9917 0.00 1.00
#> LT-HSC_072 1 0.000 0.9862 1.00 0.00
#> HSPC_285 1 0.000 0.9862 1.00 0.00
#> HSPC_268 2 0.000 0.9917 0.00 1.00
#> HSPC_282 2 0.000 0.9917 0.00 1.00
#> HSPC_288 2 0.000 0.9917 0.00 1.00
#> Prog_255 1 0.000 0.9862 1.00 0.00
#> Prog_276 2 0.000 0.9917 0.00 1.00
#> HSPC_332 1 0.000 0.9862 1.00 0.00
#> HSPC_327 2 0.000 0.9917 0.00 1.00
#> HSPC_333 2 0.000 0.9917 0.00 1.00
#> Prog_325 1 0.000 0.9862 1.00 0.00
#> Prog_331 2 0.000 0.9917 0.00 1.00
#> Prog_327 1 0.000 0.9862 1.00 0.00
#> Prog_304 1 0.000 0.9862 1.00 0.00
#> LT-HSC_096 2 0.000 0.9917 0.00 1.00
#> HSPC_346 2 0.000 0.9917 0.00 1.00
#> HSPC_353 2 0.000 0.9917 0.00 1.00
#> HSPC_371 2 0.000 0.9917 0.00 1.00
#> Prog_371 2 0.000 0.9917 0.00 1.00
#> Prog_341 2 0.000 0.9917 0.00 1.00
#> LT-HSC_108 1 0.000 0.9862 1.00 0.00
#> HSPC_410 2 0.000 0.9917 0.00 1.00
#> HSPC_411 2 0.000 0.9917 0.00 1.00
#> Prog_412 2 0.000 0.9917 0.00 1.00
#> Prog_413 2 0.000 0.9917 0.00 1.00
#> Prog_420 2 0.000 0.9917 0.00 1.00
#> Prog_426 1 0.000 0.9862 1.00 0.00
#> Prog_441 1 0.000 0.9862 1.00 0.00
#> HSPC_485 2 0.000 0.9917 0.00 1.00
#> HSPC_503 2 0.000 0.9917 0.00 1.00
#> Prog_499 2 0.000 0.9917 0.00 1.00
#> Prog_476 2 0.141 0.9731 0.02 0.98
#> Prog_506 1 0.000 0.9862 1.00 0.00
#> Prog_470 1 0.000 0.9862 1.00 0.00
#> Prog_489 1 0.000 0.9862 1.00 0.00
#> Prog_486 1 0.242 0.9471 0.96 0.04
#> Prog_504 2 0.141 0.9730 0.02 0.98
#> HSPC_544 2 0.000 0.9917 0.00 1.00
#> Prog_530 2 0.000 0.9917 0.00 1.00
#> Prog_550 1 0.000 0.9862 1.00 0.00
#> LT-HSC_142 2 0.000 0.9917 0.00 1.00
#> Prog_521 1 0.000 0.9862 1.00 0.00
#> Prog_527 1 0.000 0.9862 1.00 0.00
#> Prog_551 2 0.000 0.9917 0.00 1.00
#> HSPC_574 1 0.000 0.9862 1.00 0.00
#> Prog_565 2 0.000 0.9917 0.00 1.00
#> Prog_577 2 0.000 0.9917 0.00 1.00
#> Prog_560 1 0.000 0.9862 1.00 0.00
#> Prog_584 1 0.000 0.9862 1.00 0.00
#> Prog_567 2 0.000 0.9917 0.00 1.00
#> Prog_574 1 0.000 0.9862 1.00 0.00
#> Prog_607 2 0.000 0.9917 0.00 1.00
#> Prog_626 1 0.000 0.9862 1.00 0.00
#> Prog_609 2 0.000 0.9917 0.00 1.00
#> Prog_621 2 0.000 0.9917 0.00 1.00
#> Prog_622 2 0.000 0.9917 0.00 1.00
#> Prog_628 2 0.000 0.9917 0.00 1.00
#> Prog_598 2 0.000 0.9917 0.00 1.00
#> Prog_650 2 0.000 0.9917 0.00 1.00
#> Prog_658 2 0.141 0.9731 0.02 0.98
#> Prog_670 1 0.000 0.9862 1.00 0.00
#> HSPC_705 1 0.855 0.6119 0.72 0.28
#> HSPC_682 2 0.000 0.9917 0.00 1.00
#> HSPC_720 2 0.000 0.9917 0.00 1.00
#> Prog_685 1 0.000 0.9862 1.00 0.00
#> Prog_715 2 0.000 0.9917 0.00 1.00
#> Prog_687 2 0.000 0.9917 0.00 1.00
#> Prog_699 1 0.000 0.9862 1.00 0.00
#> Prog_705 2 0.000 0.9917 0.00 1.00
#> Prog_717 2 0.000 0.9917 0.00 1.00
#> HSPC_734 2 0.000 0.9917 0.00 1.00
#> HSPC_737 2 0.000 0.9917 0.00 1.00
#> Prog_727 2 0.000 0.9917 0.00 1.00
#> Prog_735 1 0.000 0.9862 1.00 0.00
#> Prog_759 2 0.000 0.9917 0.00 1.00
#> Prog_743 1 0.000 0.9862 1.00 0.00
#> HSPC_796 2 0.000 0.9917 0.00 1.00
#> Prog_777 1 0.000 0.9862 1.00 0.00
#> Prog_789 1 0.000 0.9862 1.00 0.00
#> Prog_795 1 0.000 0.9862 1.00 0.00
#> Prog_791 1 0.000 0.9862 1.00 0.00
#> Prog_774 2 0.000 0.9917 0.00 1.00
#> Prog_804 2 0.000 0.9917 0.00 1.00
#> HSPC_807 2 0.000 0.9917 0.00 1.00
#> Prog_829 2 0.000 0.9917 0.00 1.00
#> Prog_832 1 0.000 0.9862 1.00 0.00
#> Prog_808 2 0.000 0.9917 0.00 1.00
#> Prog_834 2 0.000 0.9917 0.00 1.00
#> Prog_840 2 0.000 0.9917 0.00 1.00
#> Prog_846 1 0.000 0.9862 1.00 0.00
cbind(get_classes(res, k = 3), get_membership(res, k = 3))
#> class entropy silhouette p1 p2 p3
#> HSPC_003 3 0.0000 0.9607 0.00 0.00 1.00
#> HSPC_034 3 0.0000 0.9607 0.00 0.00 1.00
#> HSPC_036 2 0.1529 0.9553 0.00 0.96 0.04
#> Prog_013 2 0.0000 0.9927 0.00 1.00 0.00
#> Prog_002 3 0.4291 0.7837 0.00 0.18 0.82
#> Prog_015 2 0.0000 0.9927 0.00 1.00 0.00
#> Prog_017 1 0.0000 0.9843 1.00 0.00 0.00
#> HSPC_053 2 0.0000 0.9927 0.00 1.00 0.00
#> HSPC_077 2 0.0000 0.9927 0.00 1.00 0.00
#> Prog_055 1 0.0000 0.9843 1.00 0.00 0.00
#> Prog_050 1 0.0000 0.9843 1.00 0.00 0.00
#> Prog_075 1 0.0000 0.9843 1.00 0.00 0.00
#> Prog_083 2 0.0000 0.9927 0.00 1.00 0.00
#> Prog_047 1 0.0000 0.9843 1.00 0.00 0.00
#> HSPC_101 3 0.0000 0.9607 0.00 0.00 1.00
#> HSPC_102 1 0.0000 0.9843 1.00 0.00 0.00
#> Prog_097 1 0.0000 0.9843 1.00 0.00 0.00
#> Prog_105 1 0.0000 0.9843 1.00 0.00 0.00
#> Prog_123 1 0.0000 0.9843 1.00 0.00 0.00
#> Prog_087 1 0.0000 0.9843 1.00 0.00 0.00
#> Prog_133 1 0.0000 0.9843 1.00 0.00 0.00
#> Prog_145 3 0.0000 0.9607 0.00 0.00 1.00
#> Prog_128 1 0.0000 0.9843 1.00 0.00 0.00
#> Prog_155 1 0.0000 0.9843 1.00 0.00 0.00
#> Prog_167 2 0.0000 0.9927 0.00 1.00 0.00
#> HSPC_195 3 0.0000 0.9607 0.00 0.00 1.00
#> Prog_190 1 0.0000 0.9843 1.00 0.00 0.00
#> Prog_192 1 0.0000 0.9843 1.00 0.00 0.00
#> HSPC_214 3 0.0000 0.9607 0.00 0.00 1.00
#> HSPC_216 3 0.0000 0.9607 0.00 0.00 1.00
#> Prog_236 3 0.0000 0.9607 0.00 0.00 1.00
#> Prog_238 1 0.0000 0.9843 1.00 0.00 0.00
#> Prog_245 1 0.0000 0.9843 1.00 0.00 0.00
#> Prog_234 2 0.0000 0.9927 0.00 1.00 0.00
#> LT-HSC_072 1 0.0000 0.9843 1.00 0.00 0.00
#> HSPC_285 3 0.0000 0.9607 0.00 0.00 1.00
#> HSPC_268 2 0.0000 0.9927 0.00 1.00 0.00
#> HSPC_282 2 0.0000 0.9927 0.00 1.00 0.00
#> HSPC_288 2 0.0000 0.9927 0.00 1.00 0.00
#> Prog_255 1 0.0000 0.9843 1.00 0.00 0.00
#> Prog_276 2 0.0000 0.9927 0.00 1.00 0.00
#> HSPC_332 1 0.0000 0.9843 1.00 0.00 0.00
#> HSPC_327 2 0.0000 0.9927 0.00 1.00 0.00
#> HSPC_333 3 0.0000 0.9607 0.00 0.00 1.00
#> Prog_325 1 0.0000 0.9843 1.00 0.00 0.00
#> Prog_331 2 0.0000 0.9927 0.00 1.00 0.00
#> Prog_327 1 0.0000 0.9843 1.00 0.00 0.00
#> Prog_304 1 0.0000 0.9843 1.00 0.00 0.00
#> LT-HSC_096 2 0.0000 0.9927 0.00 1.00 0.00
#> HSPC_346 3 0.0000 0.9607 0.00 0.00 1.00
#> HSPC_353 2 0.0000 0.9927 0.00 1.00 0.00
#> HSPC_371 2 0.0000 0.9927 0.00 1.00 0.00
#> Prog_371 2 0.0000 0.9927 0.00 1.00 0.00
#> Prog_341 2 0.0000 0.9927 0.00 1.00 0.00
#> LT-HSC_108 1 0.0000 0.9843 1.00 0.00 0.00
#> HSPC_410 2 0.2959 0.8870 0.00 0.90 0.10
#> HSPC_411 2 0.0000 0.9927 0.00 1.00 0.00
#> Prog_412 3 0.0000 0.9607 0.00 0.00 1.00
#> Prog_413 2 0.0000 0.9927 0.00 1.00 0.00
#> Prog_420 2 0.0000 0.9927 0.00 1.00 0.00
#> Prog_426 1 0.0000 0.9843 1.00 0.00 0.00
#> Prog_441 1 0.0000 0.9843 1.00 0.00 0.00
#> HSPC_485 2 0.0000 0.9927 0.00 1.00 0.00
#> HSPC_503 2 0.0000 0.9927 0.00 1.00 0.00
#> Prog_499 2 0.0000 0.9927 0.00 1.00 0.00
#> Prog_476 3 0.0000 0.9607 0.00 0.00 1.00
#> Prog_506 1 0.0000 0.9843 1.00 0.00 0.00
#> Prog_470 3 0.0000 0.9607 0.00 0.00 1.00
#> Prog_489 1 0.0000 0.9843 1.00 0.00 0.00
#> Prog_486 1 0.6126 0.3342 0.60 0.40 0.00
#> Prog_504 3 0.7074 0.0611 0.02 0.48 0.50
#> HSPC_544 3 0.0000 0.9607 0.00 0.00 1.00
#> Prog_530 3 0.0000 0.9607 0.00 0.00 1.00
#> Prog_550 3 0.0000 0.9607 0.00 0.00 1.00
#> LT-HSC_142 3 0.0892 0.9465 0.00 0.02 0.98
#> Prog_521 3 0.1529 0.9278 0.04 0.00 0.96
#> Prog_527 3 0.0000 0.9607 0.00 0.00 1.00
#> Prog_551 2 0.0000 0.9927 0.00 1.00 0.00
#> HSPC_574 3 0.0000 0.9607 0.00 0.00 1.00
#> Prog_565 3 0.0000 0.9607 0.00 0.00 1.00
#> Prog_577 2 0.2537 0.9116 0.00 0.92 0.08
#> Prog_560 1 0.0892 0.9647 0.98 0.02 0.00
#> Prog_584 1 0.0000 0.9843 1.00 0.00 0.00
#> Prog_567 2 0.0000 0.9927 0.00 1.00 0.00
#> Prog_574 1 0.0000 0.9843 1.00 0.00 0.00
#> Prog_607 3 0.4555 0.7572 0.00 0.20 0.80
#> Prog_626 1 0.0000 0.9843 1.00 0.00 0.00
#> Prog_609 2 0.0000 0.9927 0.00 1.00 0.00
#> Prog_621 2 0.0000 0.9927 0.00 1.00 0.00
#> Prog_622 3 0.0000 0.9607 0.00 0.00 1.00
#> Prog_628 2 0.0000 0.9927 0.00 1.00 0.00
#> Prog_598 2 0.0000 0.9927 0.00 1.00 0.00
#> Prog_650 2 0.0000 0.9927 0.00 1.00 0.00
#> Prog_658 3 0.0000 0.9607 0.00 0.00 1.00
#> Prog_670 1 0.0000 0.9843 1.00 0.00 0.00
#> HSPC_705 3 0.0000 0.9607 0.00 0.00 1.00
#> HSPC_682 3 0.0000 0.9607 0.00 0.00 1.00
#> HSPC_720 3 0.0000 0.9607 0.00 0.00 1.00
#> Prog_685 1 0.0000 0.9843 1.00 0.00 0.00
#> Prog_715 2 0.0000 0.9927 0.00 1.00 0.00
#> Prog_687 2 0.0000 0.9927 0.00 1.00 0.00
#> Prog_699 3 0.2959 0.8649 0.10 0.00 0.90
#> Prog_705 3 0.0892 0.9465 0.00 0.02 0.98
#> Prog_717 2 0.0000 0.9927 0.00 1.00 0.00
#> HSPC_734 3 0.0000 0.9607 0.00 0.00 1.00
#> HSPC_737 2 0.0000 0.9927 0.00 1.00 0.00
#> Prog_727 3 0.5216 0.6650 0.00 0.26 0.74
#> Prog_735 3 0.0000 0.9607 0.00 0.00 1.00
#> Prog_759 2 0.0000 0.9927 0.00 1.00 0.00
#> Prog_743 3 0.0000 0.9607 0.00 0.00 1.00
#> HSPC_796 2 0.0000 0.9927 0.00 1.00 0.00
#> Prog_777 1 0.3340 0.8558 0.88 0.00 0.12
#> Prog_789 1 0.0000 0.9843 1.00 0.00 0.00
#> Prog_795 1 0.1529 0.9461 0.96 0.00 0.04
#> Prog_791 1 0.0000 0.9843 1.00 0.00 0.00
#> Prog_774 2 0.2959 0.8870 0.00 0.90 0.10
#> Prog_804 2 0.0000 0.9927 0.00 1.00 0.00
#> HSPC_807 2 0.0000 0.9927 0.00 1.00 0.00
#> Prog_829 2 0.0000 0.9927 0.00 1.00 0.00
#> Prog_832 1 0.0000 0.9843 1.00 0.00 0.00
#> Prog_808 2 0.0000 0.9927 0.00 1.00 0.00
#> Prog_834 2 0.0000 0.9927 0.00 1.00 0.00
#> Prog_840 2 0.0000 0.9927 0.00 1.00 0.00
#> Prog_846 1 0.0000 0.9843 1.00 0.00 0.00
cbind(get_classes(res, k = 4), get_membership(res, k = 4))
#> class entropy silhouette p1 p2 p3 p4
#> HSPC_003 3 0.0000 0.898 0.00 0.00 1.00 0.00
#> HSPC_034 3 0.0000 0.898 0.00 0.00 1.00 0.00
#> HSPC_036 2 0.5957 0.113 0.00 0.54 0.42 0.04
#> Prog_013 2 0.4624 0.604 0.00 0.66 0.00 0.34
#> Prog_002 4 0.5962 0.718 0.00 0.26 0.08 0.66
#> Prog_015 2 0.3335 0.661 0.00 0.86 0.12 0.02
#> Prog_017 1 0.5619 0.599 0.64 0.04 0.00 0.32
#> HSPC_053 2 0.1411 0.733 0.00 0.96 0.02 0.02
#> HSPC_077 2 0.0000 0.742 0.00 1.00 0.00 0.00
#> Prog_055 1 0.0000 0.910 1.00 0.00 0.00 0.00
#> Prog_050 1 0.4522 0.648 0.68 0.00 0.00 0.32
#> Prog_075 1 0.0000 0.910 1.00 0.00 0.00 0.00
#> Prog_083 2 0.4624 0.604 0.00 0.66 0.00 0.34
#> Prog_047 1 0.0000 0.910 1.00 0.00 0.00 0.00
#> HSPC_101 3 0.0000 0.898 0.00 0.00 1.00 0.00
#> HSPC_102 1 0.0000 0.910 1.00 0.00 0.00 0.00
#> Prog_097 1 0.0000 0.910 1.00 0.00 0.00 0.00
#> Prog_105 1 0.0000 0.910 1.00 0.00 0.00 0.00
#> Prog_123 1 0.0000 0.910 1.00 0.00 0.00 0.00
#> Prog_087 1 0.0000 0.910 1.00 0.00 0.00 0.00
#> Prog_133 1 0.0707 0.898 0.98 0.00 0.00 0.02
#> Prog_145 4 0.6110 0.669 0.00 0.10 0.24 0.66
#> Prog_128 1 0.0000 0.910 1.00 0.00 0.00 0.00
#> Prog_155 1 0.0000 0.910 1.00 0.00 0.00 0.00
#> Prog_167 2 0.0000 0.742 0.00 1.00 0.00 0.00
#> HSPC_195 3 0.0000 0.898 0.00 0.00 1.00 0.00
#> Prog_190 1 0.0000 0.910 1.00 0.00 0.00 0.00
#> Prog_192 1 0.7198 0.421 0.52 0.16 0.00 0.32
#> HSPC_214 3 0.0000 0.898 0.00 0.00 1.00 0.00
#> HSPC_216 3 0.2921 0.783 0.00 0.00 0.86 0.14
#> Prog_236 3 0.3172 0.760 0.00 0.00 0.84 0.16
#> Prog_238 1 0.3400 0.782 0.82 0.00 0.00 0.18
#> Prog_245 1 0.0000 0.910 1.00 0.00 0.00 0.00
#> Prog_234 4 0.2345 0.587 0.00 0.10 0.00 0.90
#> LT-HSC_072 1 0.0000 0.910 1.00 0.00 0.00 0.00
#> HSPC_285 3 0.0000 0.898 0.00 0.00 1.00 0.00
#> HSPC_268 2 0.3400 0.614 0.00 0.82 0.00 0.18
#> HSPC_282 2 0.0707 0.740 0.00 0.98 0.00 0.02
#> HSPC_288 2 0.3400 0.614 0.00 0.82 0.00 0.18
#> Prog_255 1 0.0000 0.910 1.00 0.00 0.00 0.00
#> Prog_276 2 0.0707 0.740 0.00 0.98 0.00 0.02
#> HSPC_332 1 0.0000 0.910 1.00 0.00 0.00 0.00
#> HSPC_327 2 0.3172 0.636 0.00 0.84 0.00 0.16
#> HSPC_333 3 0.1411 0.871 0.00 0.02 0.96 0.02
#> Prog_325 1 0.0000 0.910 1.00 0.00 0.00 0.00
#> Prog_331 2 0.4522 0.612 0.00 0.68 0.00 0.32
#> Prog_327 1 0.4522 0.648 0.68 0.00 0.00 0.32
#> Prog_304 1 0.0000 0.910 1.00 0.00 0.00 0.00
#> LT-HSC_096 2 0.0000 0.742 0.00 1.00 0.00 0.00
#> HSPC_346 3 0.0000 0.898 0.00 0.00 1.00 0.00
#> HSPC_353 2 0.3400 0.614 0.00 0.82 0.00 0.18
#> HSPC_371 2 0.3610 0.587 0.00 0.80 0.00 0.20
#> Prog_371 2 0.4994 -0.354 0.00 0.52 0.00 0.48
#> Prog_341 2 0.3172 0.664 0.00 0.84 0.00 0.16
#> LT-HSC_108 1 0.0000 0.910 1.00 0.00 0.00 0.00
#> HSPC_410 4 0.5271 0.646 0.00 0.34 0.02 0.64
#> HSPC_411 2 0.4522 0.612 0.00 0.68 0.00 0.32
#> Prog_412 4 0.5512 0.580 0.00 0.04 0.30 0.66
#> Prog_413 2 0.0000 0.742 0.00 1.00 0.00 0.00
#> Prog_420 2 0.4522 0.612 0.00 0.68 0.00 0.32
#> Prog_426 1 0.0000 0.910 1.00 0.00 0.00 0.00
#> Prog_441 1 0.3610 0.764 0.80 0.00 0.00 0.20
#> HSPC_485 2 0.3172 0.636 0.00 0.84 0.00 0.16
#> HSPC_503 2 0.0707 0.740 0.00 0.98 0.00 0.02
#> Prog_499 2 0.2011 0.704 0.00 0.92 0.00 0.08
#> Prog_476 3 0.5915 0.191 0.00 0.04 0.56 0.40
#> Prog_506 1 0.0000 0.910 1.00 0.00 0.00 0.00
#> Prog_470 3 0.4277 0.568 0.00 0.00 0.72 0.28
#> Prog_489 1 0.0000 0.910 1.00 0.00 0.00 0.00
#> Prog_486 2 0.7845 0.229 0.28 0.40 0.00 0.32
#> Prog_504 4 0.4894 0.667 0.00 0.12 0.10 0.78
#> HSPC_544 3 0.0000 0.898 0.00 0.00 1.00 0.00
#> Prog_530 4 0.5570 0.332 0.00 0.02 0.44 0.54
#> Prog_550 3 0.0707 0.883 0.02 0.00 0.98 0.00
#> LT-HSC_142 3 0.5256 0.478 0.00 0.04 0.70 0.26
#> Prog_521 3 0.4277 0.543 0.28 0.00 0.72 0.00
#> Prog_527 3 0.0000 0.898 0.00 0.00 1.00 0.00
#> Prog_551 2 0.3172 0.636 0.00 0.84 0.00 0.16
#> HSPC_574 3 0.0000 0.898 0.00 0.00 1.00 0.00
#> Prog_565 3 0.1411 0.871 0.00 0.02 0.96 0.02
#> Prog_577 2 0.6808 0.492 0.00 0.56 0.12 0.32
#> Prog_560 1 0.7016 0.454 0.54 0.14 0.00 0.32
#> Prog_584 1 0.0000 0.910 1.00 0.00 0.00 0.00
#> Prog_567 2 0.0000 0.742 0.00 1.00 0.00 0.00
#> Prog_574 1 0.0000 0.910 1.00 0.00 0.00 0.00
#> Prog_607 4 0.5962 0.721 0.00 0.26 0.08 0.66
#> Prog_626 1 0.0000 0.910 1.00 0.00 0.00 0.00
#> Prog_609 2 0.1211 0.740 0.00 0.96 0.00 0.04
#> Prog_621 2 0.4624 0.606 0.00 0.66 0.00 0.34
#> Prog_622 4 0.6110 0.669 0.00 0.10 0.24 0.66
#> Prog_628 2 0.4522 0.612 0.00 0.68 0.00 0.32
#> Prog_598 2 0.4624 0.604 0.00 0.66 0.00 0.34
#> Prog_650 4 0.3172 0.521 0.00 0.16 0.00 0.84
#> Prog_658 4 0.5487 0.372 0.00 0.02 0.40 0.58
#> Prog_670 1 0.0000 0.910 1.00 0.00 0.00 0.00
#> HSPC_705 3 0.0000 0.898 0.00 0.00 1.00 0.00
#> HSPC_682 3 0.0000 0.898 0.00 0.00 1.00 0.00
#> HSPC_720 3 0.0000 0.898 0.00 0.00 1.00 0.00
#> Prog_685 1 0.0000 0.910 1.00 0.00 0.00 0.00
#> Prog_715 2 0.4277 0.436 0.00 0.72 0.00 0.28
#> Prog_687 2 0.4522 0.612 0.00 0.68 0.00 0.32
#> Prog_699 3 0.2706 0.814 0.08 0.00 0.90 0.02
#> Prog_705 3 0.3037 0.781 0.00 0.10 0.88 0.02
#> Prog_717 2 0.0000 0.742 0.00 1.00 0.00 0.00
#> HSPC_734 3 0.0000 0.898 0.00 0.00 1.00 0.00
#> HSPC_737 2 0.3400 0.614 0.00 0.82 0.00 0.18
#> Prog_727 4 0.5512 0.691 0.00 0.30 0.04 0.66
#> Prog_735 3 0.3172 0.760 0.00 0.00 0.84 0.16
#> Prog_759 4 0.4855 0.541 0.00 0.40 0.00 0.60
#> Prog_743 3 0.0000 0.898 0.00 0.00 1.00 0.00
#> HSPC_796 2 0.0000 0.742 0.00 1.00 0.00 0.00
#> Prog_777 1 0.3400 0.724 0.82 0.00 0.18 0.00
#> Prog_789 1 0.0000 0.910 1.00 0.00 0.00 0.00
#> Prog_795 1 0.4994 0.073 0.52 0.00 0.00 0.48
#> Prog_791 1 0.0000 0.910 1.00 0.00 0.00 0.00
#> Prog_774 4 0.5173 0.668 0.00 0.32 0.02 0.66
#> Prog_804 2 0.0000 0.742 0.00 1.00 0.00 0.00
#> HSPC_807 2 0.0707 0.740 0.00 0.98 0.00 0.02
#> Prog_829 2 0.2345 0.725 0.00 0.90 0.00 0.10
#> Prog_832 1 0.0000 0.910 1.00 0.00 0.00 0.00
#> Prog_808 2 0.2011 0.731 0.00 0.92 0.00 0.08
#> Prog_834 2 0.3610 0.674 0.00 0.80 0.00 0.20
#> Prog_840 2 0.4522 0.612 0.00 0.68 0.00 0.32
#> Prog_846 1 0.4522 0.648 0.68 0.00 0.00 0.32
Heatmaps for the consensus matrix. It visualizes the probability of two samples to be in a same group.
consensus_heatmap(res, k = 2)
consensus_heatmap(res, k = 3)
consensus_heatmap(res, k = 4)
Heatmaps for the membership of samples in all partitions to see how consistent they are:
membership_heatmap(res, k = 2)
membership_heatmap(res, k = 3)
membership_heatmap(res, k = 4)
As soon as the classes for columns are determined, the signatures that are significantly different between subgroups can be looked for. Following are the heatmaps for signatures.
Signature heatmaps where rows are scaled:
Signature heatmaps where rows are not scaled:
get_signatures(res, k = 2, scale_rows = FALSE)
get_signatures(res, k = 3, scale_rows = FALSE)
get_signatures(res, k = 4, scale_rows = FALSE)
Compare the overlap of signatures from different k:
compare_signatures(res)
get_signature() returns a data frame invisibly. To get the list of signatures, the function
call should be assigned to a variable explicitly. In following code, if plot argument is set
to FALSE, no heatmap is plotted while only the differential analysis is performed.
# code only for demonstration
tb = get_signature(res, k = ..., plot = FALSE)
An example of the output of tb is:
#> which_row fdr mean_1 mean_2 scaled_mean_1 scaled_mean_2 km
#> 1 38 0.042760348 8.373488 9.131774 -0.5533452 0.5164555 1
#> 2 40 0.018707592 7.106213 8.469186 -0.6173731 0.5762149 1
#> 3 55 0.019134737 10.221463 11.207825 -0.6159697 0.5749050 1
#> 4 59 0.006059896 5.921854 7.869574 -0.6899429 0.6439467 1
#> 5 60 0.018055526 8.928898 10.211722 -0.6204761 0.5791110 1
#> 6 98 0.009384629 15.714769 14.887706 0.6635654 -0.6193277 2
...
The columns in tb are:
which_row: row indices corresponding to the input matrix.fdr: FDR for the differential test. mean_x: The mean value in group x.scaled_mean_x: The mean value in group x after rows are scaled.km: Row groups if k-means clustering is applied to rows (which is done by automatically selecting number of clusters).If there are too many signatures, top_signatures = ... can be set to only show the
signatures with the highest FDRs:
# code only for demonstration
# e.g. to show the top 500 most significant rows
tb = get_signature(res, k = ..., top_signatures = 500)
If the signatures are defined as these which are uniquely high in current group, diff_method argument
can be set to "uniquely_high_in_one_group":
# code only for demonstration
tb = get_signature(res, k = ..., diff_method = "uniquely_high_in_one_group")
UMAP plot which shows how samples are separated.
dimension_reduction(res, k = 2, method = "UMAP")
dimension_reduction(res, k = 3, method = "UMAP")
dimension_reduction(res, k = 4, method = "UMAP")
Following heatmap shows how subgroups are split when increasing k:
collect_classes(res)
If matrix rows can be associated to genes, consider to use functional_enrichment(res,
...) to perform function enrichment for the signature genes. See this vignette for more detailed explanations.
Parent node: Node012. Child nodes: Node01111-leaf , Node01112-leaf , Node01113-leaf , Node01121-leaf , Node01122-leaf , Node01211-leaf , Node01212-leaf , Node01213-leaf , Node01221-leaf , Node01222-leaf , Node01223-leaf , Node01311-leaf , Node01312-leaf , Node02111-leaf , Node02112-leaf , Node02121-leaf , Node02122-leaf .
The object with results only for a single top-value method and a single partitioning method can be extracted as:
res = res_rh["0122"]
A summary of res and all the functions that can be applied to it:
res
#> A 'ConsensusPartition' object with k = 2, 3, 4.
#> On a matrix with 16789 rows and 124 columns.
#> Top rows (1679) are extracted by 'ATC' method.
#> Subgroups are detected by 'skmeans' method.
#> Performed in total 150 partitions by row resampling.
#> Best k for subgroups seems to be 3.
#>
#> Following methods can be applied to this 'ConsensusPartition' object:
#> [1] "cola_report" "collect_classes" "collect_plots"
#> [4] "collect_stats" "colnames" "compare_partitions"
#> [7] "compare_signatures" "consensus_heatmap" "dimension_reduction"
#> [10] "functional_enrichment" "get_anno_col" "get_anno"
#> [13] "get_classes" "get_consensus" "get_matrix"
#> [16] "get_membership" "get_param" "get_signatures"
#> [19] "get_stats" "is_best_k" "is_stable_k"
#> [22] "membership_heatmap" "ncol" "nrow"
#> [25] "plot_ecdf" "predict_classes" "rownames"
#> [28] "select_partition_number" "show" "suggest_best_k"
#> [31] "test_to_known_factors" "top_rows_heatmap"
collect_plots() function collects all the plots made from res for all k (number of subgroups)
into one single page to provide an easy and fast comparison between different k.
collect_plots(res)
The plots are:
k and the heatmap of
predicted classes for each k.k.k.k.All the plots in panels can be made by individual functions and they are plotted later in this section.
select_partition_number() produces several plots showing different
statistics for choosing “optimized” k. There are following statistics:
k;k, the area increased is defined as \(A_k - A_{k-1}\).The detailed explanations of these statistics can be found in the cola vignette.
Generally speaking, higher 1-PAC score, higher mean silhouette score or higher
concordance corresponds to better partition. Rand index and Jaccard index
measure how similar the current partition is compared to partition with k-1.
If they are too similar, we won't accept k is better than k-1.
select_partition_number(res)
The numeric values for all these statistics can be obtained by get_stats().
get_stats(res)
#> k 1-PAC mean_silhouette concordance area_increased Rand Jaccard
#> 2 2 1.000 0.985 0.994 0.504 0.496 0.496
#> 3 3 1.000 0.959 0.983 0.320 0.745 0.531
#> 4 4 0.767 0.721 0.837 0.102 0.878 0.663
suggest_best_k() suggests the best \(k\) based on these statistics. The rules are as follows:
suggest_best_k(res)
#> [1] 3
#> attr(,"optional")
#> [1] 2
There is also optional best \(k\) = 2 that is worth to check.
Following is the table of the partitions (You need to click the show/hide
code output link to see it). The membership matrix (columns with name p*)
is inferred by
clue::cl_consensus()
function with the SE method. Basically the value in the membership matrix
represents the probability to belong to a certain group. The finall subgroup
label for an item is determined with the group with highest probability it
belongs to.
In get_classes() function, the entropy is calculated from the membership
matrix and the silhouette score is calculated from the consensus matrix.
cbind(get_classes(res, k = 2), get_membership(res, k = 2))
#> class entropy silhouette p1 p2
#> HSPC_001 1 0.000 0.988 1.00 0.00
#> HSPC_016 1 0.000 0.988 1.00 0.00
#> Prog_007 2 0.000 1.000 0.00 1.00
#> Prog_027 1 0.881 0.576 0.70 0.30
#> Prog_003 2 0.000 1.000 0.00 1.00
#> Prog_023 2 0.000 1.000 0.00 1.00
#> Prog_056 2 0.000 1.000 0.00 1.00
#> Prog_069 2 0.000 1.000 0.00 1.00
#> Prog_059 2 0.000 1.000 0.00 1.00
#> Prog_071 2 0.000 1.000 0.00 1.00
#> Prog_077 2 0.000 1.000 0.00 1.00
#> HSPC_094 1 0.000 0.988 1.00 0.00
#> HSPC_090 1 0.000 0.988 1.00 0.00
#> Prog_103 1 0.000 0.988 1.00 0.00
#> Prog_085 2 0.000 1.000 0.00 1.00
#> Prog_116 1 0.000 0.988 1.00 0.00
#> Prog_093 2 0.000 1.000 0.00 1.00
#> Prog_099 2 0.000 1.000 0.00 1.00
#> Prog_113 2 0.000 1.000 0.00 1.00
#> HSPC_138 1 0.000 0.988 1.00 0.00
#> HSPC_156 1 0.000 0.988 1.00 0.00
#> Prog_157 2 0.000 1.000 0.00 1.00
#> Prog_153 2 0.000 1.000 0.00 1.00
#> Prog_137 2 0.000 1.000 0.00 1.00
#> HSPC_206 2 0.141 0.979 0.02 0.98
#> LT-HSC_052 1 0.000 0.988 1.00 0.00
#> HSPC_172 1 0.000 0.988 1.00 0.00
#> HSPC_179 1 0.000 0.988 1.00 0.00
#> Prog_176 1 0.000 0.988 1.00 0.00
#> Prog_206 2 0.000 1.000 0.00 1.00
#> Prog_189 2 0.000 1.000 0.00 1.00
#> Prog_186 2 0.000 1.000 0.00 1.00
#> Prog_218 2 0.000 1.000 0.00 1.00
#> LT-HSC_068 1 0.000 0.988 1.00 0.00
#> Prog_233 2 0.000 1.000 0.00 1.00
#> Prog_240 1 0.000 0.988 1.00 0.00
#> HSPC_258 2 0.000 1.000 0.00 1.00
#> Prog_260 2 0.000 1.000 0.00 1.00
#> Prog_266 1 0.000 0.988 1.00 0.00
#> Prog_272 2 0.000 1.000 0.00 1.00
#> LT-HSC_081 1 0.000 0.988 1.00 0.00
#> Prog_262 2 0.000 1.000 0.00 1.00
#> Prog_268 2 0.000 1.000 0.00 1.00
#> Prog_292 2 0.000 1.000 0.00 1.00
#> Prog_275 2 0.000 1.000 0.00 1.00
#> Prog_294 2 0.000 1.000 0.00 1.00
#> HSPC_303 1 0.000 0.988 1.00 0.00
#> HSPC_300 1 0.000 0.988 1.00 0.00
#> Prog_308 2 0.000 1.000 0.00 1.00
#> Prog_320 1 0.000 0.988 1.00 0.00
#> Prog_332 2 0.000 1.000 0.00 1.00
#> Prog_296 2 0.000 1.000 0.00 1.00
#> HSPC_341 1 0.000 0.988 1.00 0.00
#> Prog_338 1 0.000 0.988 1.00 0.00
#> HSPC_417 1 0.000 0.988 1.00 0.00
#> HSPC_423 1 0.000 0.988 1.00 0.00
#> HSPC_388 1 0.000 0.988 1.00 0.00
#> HSPC_382 1 0.000 0.988 1.00 0.00
#> HSPC_420 1 0.000 0.988 1.00 0.00
#> Prog_392 1 0.000 0.988 1.00 0.00
#> Prog_399 1 0.141 0.969 0.98 0.02
#> Prog_405 2 0.000 1.000 0.00 1.00
#> HSPC_442 1 0.000 0.988 1.00 0.00
#> HSPC_456 1 0.000 0.988 1.00 0.00
#> LT-HSC_115 1 0.000 0.988 1.00 0.00
#> Prog_428 1 0.000 0.988 1.00 0.00
#> Prog_447 2 0.000 1.000 0.00 1.00
#> Prog_436 1 0.000 0.988 1.00 0.00
#> Prog_450 2 0.000 1.000 0.00 1.00
#> Prog_456 2 0.000 1.000 0.00 1.00
#> HSPC_477 1 0.000 0.988 1.00 0.00
#> Prog_493 2 0.000 1.000 0.00 1.00
#> Prog_482 2 0.000 1.000 0.00 1.00
#> Prog_501 1 0.000 0.988 1.00 0.00
#> Prog_471 2 0.000 1.000 0.00 1.00
#> Prog_484 2 0.000 1.000 0.00 1.00
#> Prog_479 2 0.000 1.000 0.00 1.00
#> Prog_473 2 0.000 1.000 0.00 1.00
#> HSPC_527 1 0.000 0.988 1.00 0.00
#> Prog_514 2 0.000 1.000 0.00 1.00
#> Prog_559 2 0.000 1.000 0.00 1.00
#> Prog_571 2 0.000 1.000 0.00 1.00
#> Prog_590 1 0.000 0.988 1.00 0.00
#> Prog_579 2 0.000 1.000 0.00 1.00
#> Prog_581 1 0.000 0.988 1.00 0.00
#> Prog_593 2 0.000 1.000 0.00 1.00
#> Prog_557 2 0.000 1.000 0.00 1.00
#> Prog_582 2 0.000 1.000 0.00 1.00
#> LT-HSC_156 1 0.000 0.988 1.00 0.00
#> Prog_632 2 0.000 1.000 0.00 1.00
#> Prog_629 1 0.000 0.988 1.00 0.00
#> Prog_599 2 0.000 1.000 0.00 1.00
#> Prog_618 1 0.000 0.988 1.00 0.00
#> Prog_624 2 0.000 1.000 0.00 1.00
#> Prog_600 2 0.000 1.000 0.00 1.00
#> Prog_675 2 0.000 1.000 0.00 1.00
#> Prog_646 2 0.000 1.000 0.00 1.00
#> Prog_652 1 0.000 0.988 1.00 0.00
#> Prog_679 2 0.000 1.000 0.00 1.00
#> Prog_680 1 0.000 0.988 1.00 0.00
#> Prog_693 1 0.000 0.988 1.00 0.00
#> Prog_718 2 0.000 1.000 0.00 1.00
#> LT-HSC_192 1 0.000 0.988 1.00 0.00
#> Prog_760 1 0.000 0.988 1.00 0.00
#> HSPC_766 1 0.000 0.988 1.00 0.00
#> HSPC_767 1 0.000 0.988 1.00 0.00
#> Prog_769 2 0.000 1.000 0.00 1.00
#> Prog_781 2 0.000 1.000 0.00 1.00
#> Prog_763 1 0.000 0.988 1.00 0.00
#> Prog_782 1 0.000 0.988 1.00 0.00
#> Prog_794 2 0.000 1.000 0.00 1.00
#> Prog_800 2 0.000 1.000 0.00 1.00
#> Prog_764 1 0.000 0.988 1.00 0.00
#> Prog_772 2 0.000 1.000 0.00 1.00
#> Prog_768 1 0.000 0.988 1.00 0.00
#> HSPC_812 1 0.000 0.988 1.00 0.00
#> HSPC_813 1 0.000 0.988 1.00 0.00
#> HSPC_820 1 0.000 0.988 1.00 0.00
#> HSPC_808 1 0.000 0.988 1.00 0.00
#> HSPC_833 1 0.000 0.988 1.00 0.00
#> Prog_847 1 0.971 0.340 0.60 0.40
#> Prog_824 2 0.000 1.000 0.00 1.00
#> Prog_833 1 0.000 0.988 1.00 0.00
#> Prog_816 2 0.000 1.000 0.00 1.00
cbind(get_classes(res, k = 3), get_membership(res, k = 3))
#> class entropy silhouette p1 p2 p3
#> HSPC_001 1 0.0000 0.998 1.00 0.00 0.00
#> HSPC_016 1 0.0000 0.998 1.00 0.00 0.00
#> Prog_007 3 0.0000 0.971 0.00 0.00 1.00
#> Prog_027 2 0.0000 0.971 0.00 1.00 0.00
#> Prog_003 2 0.0000 0.971 0.00 1.00 0.00
#> Prog_023 2 0.0000 0.971 0.00 1.00 0.00
#> Prog_056 2 0.4555 0.733 0.00 0.80 0.20
#> Prog_069 2 0.0000 0.971 0.00 1.00 0.00
#> Prog_059 2 0.0000 0.971 0.00 1.00 0.00
#> Prog_071 3 0.0892 0.961 0.00 0.02 0.98
#> Prog_077 2 0.0000 0.971 0.00 1.00 0.00
#> HSPC_094 1 0.1529 0.959 0.96 0.00 0.04
#> HSPC_090 1 0.0000 0.998 1.00 0.00 0.00
#> Prog_103 1 0.1529 0.959 0.96 0.00 0.04
#> Prog_085 2 0.0000 0.971 0.00 1.00 0.00
#> Prog_116 1 0.0000 0.998 1.00 0.00 0.00
#> Prog_093 3 0.5397 0.616 0.00 0.28 0.72
#> Prog_099 2 0.0000 0.971 0.00 1.00 0.00
#> Prog_113 3 0.0000 0.971 0.00 0.00 1.00
#> HSPC_138 1 0.0000 0.998 1.00 0.00 0.00
#> HSPC_156 1 0.0000 0.998 1.00 0.00 0.00
#> Prog_157 2 0.2066 0.917 0.00 0.94 0.06
#> Prog_153 2 0.0000 0.971 0.00 1.00 0.00
#> Prog_137 2 0.0892 0.956 0.00 0.98 0.02
#> HSPC_206 3 0.0000 0.971 0.00 0.00 1.00
#> LT-HSC_052 1 0.0000 0.998 1.00 0.00 0.00
#> HSPC_172 1 0.0000 0.998 1.00 0.00 0.00
#> HSPC_179 1 0.0000 0.998 1.00 0.00 0.00
#> Prog_176 1 0.0000 0.998 1.00 0.00 0.00
#> Prog_206 2 0.0000 0.971 0.00 1.00 0.00
#> Prog_189 2 0.0000 0.971 0.00 1.00 0.00
#> Prog_186 3 0.0000 0.971 0.00 0.00 1.00
#> Prog_218 2 0.0000 0.971 0.00 1.00 0.00
#> LT-HSC_068 1 0.0000 0.998 1.00 0.00 0.00
#> Prog_233 2 0.0000 0.971 0.00 1.00 0.00
#> Prog_240 1 0.0000 0.998 1.00 0.00 0.00
#> HSPC_258 2 0.0892 0.956 0.00 0.98 0.02
#> Prog_260 3 0.0000 0.971 0.00 0.00 1.00
#> Prog_266 1 0.0000 0.998 1.00 0.00 0.00
#> Prog_272 3 0.1529 0.945 0.00 0.04 0.96
#> LT-HSC_081 1 0.0000 0.998 1.00 0.00 0.00
#> Prog_262 3 0.0000 0.971 0.00 0.00 1.00
#> Prog_268 3 0.0000 0.971 0.00 0.00 1.00
#> Prog_292 2 0.6244 0.201 0.00 0.56 0.44
#> Prog_275 3 0.0892 0.961 0.00 0.02 0.98
#> Prog_294 2 0.0000 0.971 0.00 1.00 0.00
#> HSPC_303 1 0.0000 0.998 1.00 0.00 0.00
#> HSPC_300 1 0.0000 0.998 1.00 0.00 0.00
#> Prog_308 3 0.0000 0.971 0.00 0.00 1.00
#> Prog_320 1 0.0000 0.998 1.00 0.00 0.00
#> Prog_332 2 0.0000 0.971 0.00 1.00 0.00
#> Prog_296 2 0.0000 0.971 0.00 1.00 0.00
#> HSPC_341 1 0.0000 0.998 1.00 0.00 0.00
#> Prog_338 1 0.0000 0.998 1.00 0.00 0.00
#> HSPC_417 1 0.0000 0.998 1.00 0.00 0.00
#> HSPC_423 1 0.0000 0.998 1.00 0.00 0.00
#> HSPC_388 1 0.0000 0.998 1.00 0.00 0.00
#> HSPC_382 1 0.0000 0.998 1.00 0.00 0.00
#> HSPC_420 1 0.0000 0.998 1.00 0.00 0.00
#> Prog_392 2 0.5560 0.569 0.30 0.70 0.00
#> Prog_399 3 0.0000 0.971 0.00 0.00 1.00
#> Prog_405 3 0.0892 0.961 0.00 0.02 0.98
#> HSPC_442 1 0.0000 0.998 1.00 0.00 0.00
#> HSPC_456 1 0.0000 0.998 1.00 0.00 0.00
#> LT-HSC_115 1 0.0000 0.998 1.00 0.00 0.00
#> Prog_428 1 0.0000 0.998 1.00 0.00 0.00
#> Prog_447 3 0.0892 0.961 0.00 0.02 0.98
#> Prog_436 1 0.0000 0.998 1.00 0.00 0.00
#> Prog_450 2 0.0000 0.971 0.00 1.00 0.00
#> Prog_456 3 0.0892 0.961 0.00 0.02 0.98
#> HSPC_477 1 0.0000 0.998 1.00 0.00 0.00
#> Prog_493 2 0.0892 0.956 0.00 0.98 0.02
#> Prog_482 2 0.0000 0.971 0.00 1.00 0.00
#> Prog_501 3 0.0000 0.971 0.00 0.00 1.00
#> Prog_471 2 0.0892 0.956 0.00 0.98 0.02
#> Prog_484 3 0.0000 0.971 0.00 0.00 1.00
#> Prog_479 2 0.0000 0.971 0.00 1.00 0.00
#> Prog_473 3 0.0892 0.961 0.00 0.02 0.98
#> HSPC_527 1 0.0000 0.998 1.00 0.00 0.00
#> Prog_514 3 0.0000 0.971 0.00 0.00 1.00
#> Prog_559 2 0.0000 0.971 0.00 1.00 0.00
#> Prog_571 3 0.0892 0.961 0.00 0.02 0.98
#> Prog_590 1 0.0000 0.998 1.00 0.00 0.00
#> Prog_579 3 0.0000 0.971 0.00 0.00 1.00
#> Prog_581 2 0.0000 0.971 0.00 1.00 0.00
#> Prog_593 2 0.0000 0.971 0.00 1.00 0.00
#> Prog_557 2 0.0000 0.971 0.00 1.00 0.00
#> Prog_582 3 0.0000 0.971 0.00 0.00 1.00
#> LT-HSC_156 2 0.0000 0.971 0.00 1.00 0.00
#> Prog_632 2 0.0000 0.971 0.00 1.00 0.00
#> Prog_629 1 0.0000 0.998 1.00 0.00 0.00
#> Prog_599 2 0.0000 0.971 0.00 1.00 0.00
#> Prog_618 2 0.0000 0.971 0.00 1.00 0.00
#> Prog_624 2 0.0000 0.971 0.00 1.00 0.00
#> Prog_600 2 0.0000 0.971 0.00 1.00 0.00
#> Prog_675 3 0.0000 0.971 0.00 0.00 1.00
#> Prog_646 3 0.6280 0.157 0.00 0.46 0.54
#> Prog_652 2 0.0000 0.971 0.00 1.00 0.00
#> Prog_679 3 0.0000 0.971 0.00 0.00 1.00
#> Prog_680 1 0.0000 0.998 1.00 0.00 0.00
#> Prog_693 1 0.0000 0.998 1.00 0.00 0.00
#> Prog_718 2 0.0000 0.971 0.00 1.00 0.00
#> LT-HSC_192 1 0.0000 0.998 1.00 0.00 0.00
#> Prog_760 2 0.0000 0.971 0.00 1.00 0.00
#> HSPC_766 1 0.0000 0.998 1.00 0.00 0.00
#> HSPC_767 1 0.0000 0.998 1.00 0.00 0.00
#> Prog_769 3 0.0000 0.971 0.00 0.00 1.00
#> Prog_781 3 0.0000 0.971 0.00 0.00 1.00
#> Prog_763 1 0.0000 0.998 1.00 0.00 0.00
#> Prog_782 1 0.0000 0.998 1.00 0.00 0.00
#> Prog_794 2 0.0000 0.971 0.00 1.00 0.00
#> Prog_800 3 0.0000 0.971 0.00 0.00 1.00
#> Prog_764 3 0.0000 0.971 0.00 0.00 1.00
#> Prog_772 3 0.0000 0.971 0.00 0.00 1.00
#> Prog_768 1 0.0000 0.998 1.00 0.00 0.00
#> HSPC_812 1 0.0000 0.998 1.00 0.00 0.00
#> HSPC_813 1 0.0000 0.998 1.00 0.00 0.00
#> HSPC_820 1 0.0000 0.998 1.00 0.00 0.00
#> HSPC_808 1 0.0000 0.998 1.00 0.00 0.00
#> HSPC_833 1 0.0000 0.998 1.00 0.00 0.00
#> Prog_847 3 0.0000 0.971 0.00 0.00 1.00
#> Prog_824 3 0.0000 0.971 0.00 0.00 1.00
#> Prog_833 1 0.0000 0.998 1.00 0.00 0.00
#> Prog_816 3 0.0000 0.971 0.00 0.00 1.00
cbind(get_classes(res, k = 4), get_membership(res, k = 4))
#> class entropy silhouette p1 p2 p3 p4
#> HSPC_001 1 0.0000 0.9757 1.00 0.00 0.00 0.00
#> HSPC_016 1 0.0000 0.9757 1.00 0.00 0.00 0.00
#> Prog_007 4 0.4134 0.4803 0.00 0.00 0.26 0.74
#> Prog_027 2 0.7004 0.4457 0.00 0.58 0.20 0.22
#> Prog_003 2 0.4277 0.6060 0.00 0.72 0.00 0.28
#> Prog_023 2 0.0707 0.8539 0.00 0.98 0.00 0.02
#> Prog_056 4 0.3611 0.6072 0.00 0.08 0.06 0.86
#> Prog_069 4 0.5151 0.5548 0.00 0.14 0.10 0.76
#> Prog_059 2 0.2011 0.8257 0.00 0.92 0.00 0.08
#> Prog_071 3 0.7148 0.4115 0.00 0.22 0.56 0.22
#> Prog_077 4 0.3801 0.6765 0.00 0.22 0.00 0.78
#> HSPC_094 3 0.6941 0.3082 0.36 0.00 0.52 0.12
#> HSPC_090 1 0.1211 0.9418 0.96 0.00 0.04 0.00
#> Prog_103 3 0.6370 0.4028 0.28 0.00 0.62 0.10
#> Prog_085 4 0.4907 0.5389 0.00 0.42 0.00 0.58
#> Prog_116 1 0.0000 0.9757 1.00 0.00 0.00 0.00
#> Prog_093 4 0.7913 -0.1542 0.00 0.32 0.32 0.36
#> Prog_099 2 0.0000 0.8602 0.00 1.00 0.00 0.00
#> Prog_113 3 0.3400 0.5907 0.00 0.00 0.82 0.18
#> HSPC_138 1 0.0000 0.9757 1.00 0.00 0.00 0.00
#> HSPC_156 1 0.0000 0.9757 1.00 0.00 0.00 0.00
#> Prog_157 4 0.6840 0.2680 0.00 0.18 0.22 0.60
#> Prog_153 2 0.0000 0.8602 0.00 1.00 0.00 0.00
#> Prog_137 4 0.4642 0.6694 0.00 0.24 0.02 0.74
#> HSPC_206 3 0.0000 0.6338 0.00 0.00 1.00 0.00
#> LT-HSC_052 1 0.0000 0.9757 1.00 0.00 0.00 0.00
#> HSPC_172 1 0.0000 0.9757 1.00 0.00 0.00 0.00
#> HSPC_179 1 0.0000 0.9757 1.00 0.00 0.00 0.00
#> Prog_176 1 0.0000 0.9757 1.00 0.00 0.00 0.00
#> Prog_206 2 0.0000 0.8602 0.00 1.00 0.00 0.00
#> Prog_189 2 0.1637 0.8371 0.00 0.94 0.00 0.06
#> Prog_186 3 0.3801 0.6014 0.00 0.00 0.78 0.22
#> Prog_218 4 0.4907 0.5389 0.00 0.42 0.00 0.58
#> LT-HSC_068 1 0.0000 0.9757 1.00 0.00 0.00 0.00
#> Prog_233 2 0.0000 0.8602 0.00 1.00 0.00 0.00
#> Prog_240 1 0.0000 0.9757 1.00 0.00 0.00 0.00
#> HSPC_258 4 0.4284 0.6789 0.00 0.20 0.02 0.78
#> Prog_260 4 0.4406 0.4261 0.00 0.00 0.30 0.70
#> Prog_266 1 0.0000 0.9757 1.00 0.00 0.00 0.00
#> Prog_272 3 0.7654 0.1756 0.00 0.34 0.44 0.22
#> LT-HSC_081 1 0.0000 0.9757 1.00 0.00 0.00 0.00
#> Prog_262 4 0.4277 0.4554 0.00 0.00 0.28 0.72
#> Prog_268 3 0.3610 0.6241 0.00 0.00 0.80 0.20
#> Prog_292 2 0.6104 0.5520 0.00 0.68 0.18 0.14
#> Prog_275 4 0.4713 -0.0338 0.00 0.00 0.36 0.64
#> Prog_294 2 0.2647 0.7952 0.00 0.88 0.00 0.12
#> HSPC_303 1 0.0000 0.9757 1.00 0.00 0.00 0.00
#> HSPC_300 1 0.0000 0.9757 1.00 0.00 0.00 0.00
#> Prog_308 3 0.3801 0.6017 0.00 0.00 0.78 0.22
#> Prog_320 1 0.2706 0.8790 0.90 0.08 0.00 0.02
#> Prog_332 4 0.4713 0.5948 0.00 0.36 0.00 0.64
#> Prog_296 4 0.4907 0.5389 0.00 0.42 0.00 0.58
#> HSPC_341 1 0.0000 0.9757 1.00 0.00 0.00 0.00
#> Prog_338 1 0.3172 0.8063 0.84 0.00 0.16 0.00
#> HSPC_417 1 0.0000 0.9757 1.00 0.00 0.00 0.00
#> HSPC_423 1 0.0000 0.9757 1.00 0.00 0.00 0.00
#> HSPC_388 1 0.0000 0.9757 1.00 0.00 0.00 0.00
#> HSPC_382 1 0.0707 0.9596 0.98 0.00 0.02 0.00
#> HSPC_420 1 0.0000 0.9757 1.00 0.00 0.00 0.00
#> Prog_392 2 0.7004 0.4457 0.00 0.58 0.20 0.22
#> Prog_399 3 0.3801 0.5709 0.00 0.00 0.78 0.22
#> Prog_405 4 0.4907 -0.0941 0.00 0.00 0.42 0.58
#> HSPC_442 1 0.0000 0.9757 1.00 0.00 0.00 0.00
#> HSPC_456 1 0.0000 0.9757 1.00 0.00 0.00 0.00
#> LT-HSC_115 1 0.0000 0.9757 1.00 0.00 0.00 0.00
#> Prog_428 1 0.0000 0.9757 1.00 0.00 0.00 0.00
#> Prog_447 3 0.7654 0.1715 0.00 0.34 0.44 0.22
#> Prog_436 1 0.1637 0.9196 0.94 0.06 0.00 0.00
#> Prog_450 4 0.4907 0.5389 0.00 0.42 0.00 0.58
#> Prog_456 3 0.7610 0.2223 0.00 0.32 0.46 0.22
#> HSPC_477 1 0.0000 0.9757 1.00 0.00 0.00 0.00
#> Prog_493 4 0.4284 0.6789 0.00 0.20 0.02 0.78
#> Prog_482 2 0.0000 0.8602 0.00 1.00 0.00 0.00
#> Prog_501 3 0.2011 0.6237 0.00 0.00 0.92 0.08
#> Prog_471 4 0.4284 0.6789 0.00 0.20 0.02 0.78
#> Prog_484 3 0.3610 0.6241 0.00 0.00 0.80 0.20
#> Prog_479 2 0.0000 0.8602 0.00 1.00 0.00 0.00
#> Prog_473 3 0.7198 0.3960 0.00 0.18 0.54 0.28
#> HSPC_527 1 0.0000 0.9757 1.00 0.00 0.00 0.00
#> Prog_514 3 0.3610 0.6241 0.00 0.00 0.80 0.20
#> Prog_559 4 0.4907 0.5389 0.00 0.42 0.00 0.58
#> Prog_571 3 0.7382 0.3451 0.00 0.26 0.52 0.22
#> Prog_590 1 0.6262 0.2164 0.54 0.00 0.40 0.06
#> Prog_579 3 0.3610 0.6241 0.00 0.00 0.80 0.20
#> Prog_581 2 0.0000 0.8602 0.00 1.00 0.00 0.00
#> Prog_593 2 0.0000 0.8602 0.00 1.00 0.00 0.00
#> Prog_557 2 0.2647 0.7952 0.00 0.88 0.00 0.12
#> Prog_582 3 0.3610 0.6241 0.00 0.00 0.80 0.20
#> LT-HSC_156 2 0.0000 0.8602 0.00 1.00 0.00 0.00
#> Prog_632 4 0.5256 0.5546 0.00 0.26 0.04 0.70
#> Prog_629 1 0.0000 0.9757 1.00 0.00 0.00 0.00
#> Prog_599 2 0.2345 0.8117 0.00 0.90 0.00 0.10
#> Prog_618 2 0.0000 0.8602 0.00 1.00 0.00 0.00
#> Prog_624 2 0.0000 0.8602 0.00 1.00 0.00 0.00
#> Prog_600 2 0.0000 0.8602 0.00 1.00 0.00 0.00
#> Prog_675 3 0.3610 0.6241 0.00 0.00 0.80 0.20
#> Prog_646 4 0.2011 0.6351 0.00 0.08 0.00 0.92
#> Prog_652 2 0.0000 0.8602 0.00 1.00 0.00 0.00
#> Prog_679 3 0.3975 0.6267 0.00 0.00 0.76 0.24
#> Prog_680 1 0.0000 0.9757 1.00 0.00 0.00 0.00
#> Prog_693 1 0.0000 0.9757 1.00 0.00 0.00 0.00
#> Prog_718 4 0.3801 0.6765 0.00 0.22 0.00 0.78
#> LT-HSC_192 1 0.0000 0.9757 1.00 0.00 0.00 0.00
#> Prog_760 2 0.7004 0.4457 0.00 0.58 0.20 0.22
#> HSPC_766 1 0.1637 0.9247 0.94 0.00 0.06 0.00
#> HSPC_767 1 0.0000 0.9757 1.00 0.00 0.00 0.00
#> Prog_769 4 0.3801 0.5201 0.00 0.00 0.22 0.78
#> Prog_781 3 0.3801 0.5709 0.00 0.00 0.78 0.22
#> Prog_763 1 0.0000 0.9757 1.00 0.00 0.00 0.00
#> Prog_782 1 0.0000 0.9757 1.00 0.00 0.00 0.00
#> Prog_794 4 0.4907 0.5389 0.00 0.42 0.00 0.58
#> Prog_800 3 0.3610 0.6241 0.00 0.00 0.80 0.20
#> Prog_764 3 0.2345 0.6184 0.00 0.00 0.90 0.10
#> Prog_772 3 0.3610 0.6241 0.00 0.00 0.80 0.20
#> Prog_768 1 0.0000 0.9757 1.00 0.00 0.00 0.00
#> HSPC_812 1 0.4088 0.7779 0.82 0.00 0.14 0.04
#> HSPC_813 1 0.0000 0.9757 1.00 0.00 0.00 0.00
#> HSPC_820 1 0.0000 0.9757 1.00 0.00 0.00 0.00
#> HSPC_808 1 0.0000 0.9757 1.00 0.00 0.00 0.00
#> HSPC_833 1 0.0000 0.9757 1.00 0.00 0.00 0.00
#> Prog_847 3 0.0707 0.6360 0.00 0.00 0.98 0.02
#> Prog_824 3 0.3610 0.6241 0.00 0.00 0.80 0.20
#> Prog_833 1 0.0000 0.9757 1.00 0.00 0.00 0.00
#> Prog_816 4 0.4277 0.0982 0.00 0.00 0.28 0.72
Heatmaps for the consensus matrix. It visualizes the probability of two samples to be in a same group.
consensus_heatmap(res, k = 2)
consensus_heatmap(res, k = 3)
consensus_heatmap(res, k = 4)
Heatmaps for the membership of samples in all partitions to see how consistent they are:
membership_heatmap(res, k = 2)
membership_heatmap(res, k = 3)
membership_heatmap(res, k = 4)
As soon as the classes for columns are determined, the signatures that are significantly different between subgroups can be looked for. Following are the heatmaps for signatures.
Signature heatmaps where rows are scaled:
Signature heatmaps where rows are not scaled:
get_signatures(res, k = 2, scale_rows = FALSE)
get_signatures(res, k = 3, scale_rows = FALSE)
get_signatures(res, k = 4, scale_rows = FALSE)
Compare the overlap of signatures from different k:
compare_signatures(res)
get_signature() returns a data frame invisibly. To get the list of signatures, the function
call should be assigned to a variable explicitly. In following code, if plot argument is set
to FALSE, no heatmap is plotted while only the differential analysis is performed.
# code only for demonstration
tb = get_signature(res, k = ..., plot = FALSE)
An example of the output of tb is:
#> which_row fdr mean_1 mean_2 scaled_mean_1 scaled_mean_2 km
#> 1 38 0.042760348 8.373488 9.131774 -0.5533452 0.5164555 1
#> 2 40 0.018707592 7.106213 8.469186 -0.6173731 0.5762149 1
#> 3 55 0.019134737 10.221463 11.207825 -0.6159697 0.5749050 1
#> 4 59 0.006059896 5.921854 7.869574 -0.6899429 0.6439467 1
#> 5 60 0.018055526 8.928898 10.211722 -0.6204761 0.5791110 1
#> 6 98 0.009384629 15.714769 14.887706 0.6635654 -0.6193277 2
...
The columns in tb are:
which_row: row indices corresponding to the input matrix.fdr: FDR for the differential test. mean_x: The mean value in group x.scaled_mean_x: The mean value in group x after rows are scaled.km: Row groups if k-means clustering is applied to rows (which is done by automatically selecting number of clusters).If there are too many signatures, top_signatures = ... can be set to only show the
signatures with the highest FDRs:
# code only for demonstration
# e.g. to show the top 500 most significant rows
tb = get_signature(res, k = ..., top_signatures = 500)
If the signatures are defined as these which are uniquely high in current group, diff_method argument
can be set to "uniquely_high_in_one_group":
# code only for demonstration
tb = get_signature(res, k = ..., diff_method = "uniquely_high_in_one_group")
UMAP plot which shows how samples are separated.
dimension_reduction(res, k = 2, method = "UMAP")
dimension_reduction(res, k = 3, method = "UMAP")
dimension_reduction(res, k = 4, method = "UMAP")
Following heatmap shows how subgroups are split when increasing k:
collect_classes(res)
If matrix rows can be associated to genes, consider to use functional_enrichment(res,
...) to perform function enrichment for the signature genes. See this vignette for more detailed explanations.
Parent node: Node01. Child nodes: Node0111 , Node0112 , Node0121 , Node0122 , Node0131 , Node0132-leaf , Node0141-leaf , Node0142-leaf , Node0211 , Node0212 , Node0213-leaf , Node0311-leaf , Node0312-leaf , Node0321-leaf , Node0322-leaf , Node0331-leaf , Node0332-leaf , Node0411-leaf , Node0412-leaf , Node0413-leaf , Node0421-leaf , Node0422-leaf , Node0423-leaf .
The object with results only for a single top-value method and a single partitioning method can be extracted as:
res = res_rh["013"]
A summary of res and all the functions that can be applied to it:
res
#> A 'ConsensusPartition' object with k = 2, 3, 4.
#> On a matrix with 16862 rows and 115 columns.
#> Top rows (1686) are extracted by 'ATC' method.
#> Subgroups are detected by 'skmeans' method.
#> Performed in total 150 partitions by row resampling.
#> Best k for subgroups seems to be 2.
#>
#> Following methods can be applied to this 'ConsensusPartition' object:
#> [1] "cola_report" "collect_classes" "collect_plots"
#> [4] "collect_stats" "colnames" "compare_partitions"
#> [7] "compare_signatures" "consensus_heatmap" "dimension_reduction"
#> [10] "functional_enrichment" "get_anno_col" "get_anno"
#> [13] "get_classes" "get_consensus" "get_matrix"
#> [16] "get_membership" "get_param" "get_signatures"
#> [19] "get_stats" "is_best_k" "is_stable_k"
#> [22] "membership_heatmap" "ncol" "nrow"
#> [25] "plot_ecdf" "predict_classes" "rownames"
#> [28] "select_partition_number" "show" "suggest_best_k"
#> [31] "test_to_known_factors" "top_rows_heatmap"
collect_plots() function collects all the plots made from res for all k (number of subgroups)
into one single page to provide an easy and fast comparison between different k.
collect_plots(res)
The plots are:
k and the heatmap of
predicted classes for each k.k.k.k.All the plots in panels can be made by individual functions and they are plotted later in this section.
select_partition_number() produces several plots showing different
statistics for choosing “optimized” k. There are following statistics:
k;k, the area increased is defined as \(A_k - A_{k-1}\).The detailed explanations of these statistics can be found in the cola vignette.
Generally speaking, higher 1-PAC score, higher mean silhouette score or higher
concordance corresponds to better partition. Rand index and Jaccard index
measure how similar the current partition is compared to partition with k-1.
If they are too similar, we won't accept k is better than k-1.
select_partition_number(res)
The numeric values for all these statistics can be obtained by get_stats().
get_stats(res)
#> k 1-PAC mean_silhouette concordance area_increased Rand Jaccard
#> 2 2 0.999 0.973 0.989 0.490 0.512 0.512
#> 3 3 0.844 0.879 0.948 0.369 0.743 0.533
#> 4 4 0.616 0.604 0.773 0.105 0.902 0.720
suggest_best_k() suggests the best \(k\) based on these statistics. The rules are as follows:
suggest_best_k(res)
#> [1] 2
Following is the table of the partitions (You need to click the show/hide
code output link to see it). The membership matrix (columns with name p*)
is inferred by
clue::cl_consensus()
function with the SE method. Basically the value in the membership matrix
represents the probability to belong to a certain group. The finall subgroup
label for an item is determined with the group with highest probability it
belongs to.
In get_classes() function, the entropy is calculated from the membership
matrix and the silhouette score is calculated from the consensus matrix.
cbind(get_classes(res, k = 2), get_membership(res, k = 2))
#> class entropy silhouette p1 p2
#> Prog_019 1 0.000 0.98669 1.00 0.00
#> Prog_043 2 0.000 0.99118 0.00 1.00
#> Prog_057 1 0.000 0.98669 1.00 0.00
#> Prog_045 2 0.000 0.99118 0.00 1.00
#> Prog_065 1 0.000 0.98669 1.00 0.00
#> Prog_117 2 0.000 0.99118 0.00 1.00
#> Prog_101 1 0.000 0.98669 1.00 0.00
#> HSPC_132 2 0.000 0.99118 0.00 1.00
#> LT-HSC_043 2 0.000 0.99118 0.00 1.00
#> Prog_141 2 0.000 0.99118 0.00 1.00
#> Prog_129 1 0.000 0.98669 1.00 0.00
#> Prog_136 2 0.529 0.86398 0.12 0.88
#> Prog_130 1 0.000 0.98669 1.00 0.00
#> Prog_143 1 0.000 0.98669 1.00 0.00
#> Prog_150 1 0.402 0.90798 0.92 0.08
#> Prog_168 1 0.000 0.98669 1.00 0.00
#> Prog_132 1 1.000 -0.00455 0.50 0.50
#> LT-HSC_055 2 0.000 0.99118 0.00 1.00
#> LT-HSC_056 1 0.000 0.98669 1.00 0.00
#> Prog_183 2 0.000 0.99118 0.00 1.00
#> Prog_184 1 0.000 0.98669 1.00 0.00
#> Prog_179 1 0.000 0.98669 1.00 0.00
#> Prog_197 1 0.000 0.98669 1.00 0.00
#> Prog_203 2 0.000 0.99118 0.00 1.00
#> Prog_209 1 0.529 0.86263 0.88 0.12
#> LT-HSC_060 1 0.000 0.98669 1.00 0.00
#> Prog_224 2 0.000 0.99118 0.00 1.00
#> Prog_231 2 0.000 0.99118 0.00 1.00
#> Prog_243 1 0.000 0.98669 1.00 0.00
#> Prog_227 2 0.000 0.99118 0.00 1.00
#> Prog_228 1 0.000 0.98669 1.00 0.00
#> HSPC_261 2 0.000 0.99118 0.00 1.00
#> HSPC_269 2 0.141 0.97303 0.02 0.98
#> HSPC_275 1 0.000 0.98669 1.00 0.00
#> Prog_267 1 0.000 0.98669 1.00 0.00
#> Prog_273 1 0.000 0.98669 1.00 0.00
#> Prog_263 1 0.000 0.98669 1.00 0.00
#> Prog_287 1 0.000 0.98669 1.00 0.00
#> Prog_270 1 0.000 0.98669 1.00 0.00
#> Prog_258 2 0.760 0.72143 0.22 0.78
#> Prog_319 2 0.000 0.99118 0.00 1.00
#> Prog_330 2 0.000 0.99118 0.00 1.00
#> Prog_336 2 0.000 0.99118 0.00 1.00
#> Prog_300 1 0.000 0.98669 1.00 0.00
#> HSPC_343 2 0.242 0.95380 0.04 0.96
#> HSPC_370 1 0.000 0.98669 1.00 0.00
#> HSPC_342 1 0.000 0.98669 1.00 0.00
#> Prog_343 2 0.000 0.99118 0.00 1.00
#> Prog_367 1 0.000 0.98669 1.00 0.00
#> LT-HSC_103 2 0.000 0.99118 0.00 1.00
#> Prog_353 2 0.000 0.99118 0.00 1.00
#> HSPC_412 1 0.000 0.98669 1.00 0.00
#> HSPC_407 1 0.000 0.98669 1.00 0.00
#> HSPC_419 1 0.000 0.98669 1.00 0.00
#> Prog_387 1 0.000 0.98669 1.00 0.00
#> Prog_389 2 0.000 0.99118 0.00 1.00
#> Prog_401 2 0.000 0.99118 0.00 1.00
#> Prog_414 1 0.000 0.98669 1.00 0.00
#> HSPC_436 2 0.000 0.99118 0.00 1.00
#> HSPC_454 2 0.000 0.99118 0.00 1.00
#> Prog_451 1 0.402 0.90798 0.92 0.08
#> Prog_437 2 0.000 0.99118 0.00 1.00
#> Prog_443 1 0.000 0.98669 1.00 0.00
#> HSPC_508 1 0.469 0.88588 0.90 0.10
#> Prog_475 1 0.000 0.98669 1.00 0.00
#> Prog_487 1 0.000 0.98669 1.00 0.00
#> Prog_505 1 0.000 0.98669 1.00 0.00
#> Prog_488 1 0.000 0.98669 1.00 0.00
#> Prog_500 1 0.000 0.98669 1.00 0.00
#> LT-HSC_130 2 0.000 0.99118 0.00 1.00
#> Prog_485 2 0.000 0.99118 0.00 1.00
#> Prog_491 1 0.000 0.98669 1.00 0.00
#> Prog_529 1 0.000 0.98669 1.00 0.00
#> Prog_541 1 0.000 0.98669 1.00 0.00
#> Prog_547 2 0.000 0.99118 0.00 1.00
#> Prog_531 1 0.000 0.98669 1.00 0.00
#> Prog_520 1 0.000 0.98669 1.00 0.00
#> LT-HSC_143 2 0.000 0.99118 0.00 1.00
#> HSPC_553 1 0.000 0.98669 1.00 0.00
#> Prog_569 1 0.000 0.98669 1.00 0.00
#> Prog_587 2 0.000 0.99118 0.00 1.00
#> Prog_602 2 0.000 0.99118 0.00 1.00
#> Prog_614 2 0.000 0.99118 0.00 1.00
#> Prog_623 2 0.000 0.99118 0.00 1.00
#> Prog_612 1 0.000 0.98669 1.00 0.00
#> Prog_630 1 0.000 0.98669 1.00 0.00
#> LT-HSC_168 1 0.000 0.98669 1.00 0.00
#> HSPC_644 2 0.000 0.99118 0.00 1.00
#> HSPC_638 2 0.000 0.99118 0.00 1.00
#> Prog_661 1 0.000 0.98669 1.00 0.00
#> Prog_654 2 0.000 0.99118 0.00 1.00
#> HSPC_695 2 0.000 0.99118 0.00 1.00
#> Prog_698 1 0.000 0.98669 1.00 0.00
#> Prog_681 1 0.000 0.98669 1.00 0.00
#> Prog_706 1 0.000 0.98669 1.00 0.00
#> Prog_712 2 0.000 0.99118 0.00 1.00
#> Prog_682 2 0.000 0.99118 0.00 1.00
#> Prog_713 1 0.000 0.98669 1.00 0.00
#> Prog_753 1 0.000 0.98669 1.00 0.00
#> Prog_736 1 0.000 0.98669 1.00 0.00
#> Prog_754 1 0.000 0.98669 1.00 0.00
#> Prog_793 2 0.000 0.99118 0.00 1.00
#> Prog_801 2 0.000 0.99118 0.00 1.00
#> Prog_765 1 0.000 0.98669 1.00 0.00
#> Prog_779 1 0.000 0.98669 1.00 0.00
#> Prog_792 1 0.000 0.98669 1.00 0.00
#> Prog_798 1 0.000 0.98669 1.00 0.00
#> Prog_817 2 0.000 0.99118 0.00 1.00
#> Prog_836 1 0.000 0.98669 1.00 0.00
#> Prog_843 1 0.000 0.98669 1.00 0.00
#> Prog_820 2 0.000 0.99118 0.00 1.00
#> Prog_839 1 0.000 0.98669 1.00 0.00
#> Prog_845 1 0.000 0.98669 1.00 0.00
#> Prog_809 2 0.000 0.99118 0.00 1.00
#> Prog_810 1 0.000 0.98669 1.00 0.00
cbind(get_classes(res, k = 3), get_membership(res, k = 3))
#> class entropy silhouette p1 p2 p3
#> Prog_019 1 0.0000 0.917 1.00 0.00 0.00
#> Prog_043 2 0.0000 0.970 0.00 1.00 0.00
#> Prog_057 1 0.0892 0.907 0.98 0.00 0.02
#> Prog_045 2 0.0000 0.970 0.00 1.00 0.00
#> Prog_065 1 0.0000 0.917 1.00 0.00 0.00
#> Prog_117 2 0.0000 0.970 0.00 1.00 0.00
#> Prog_101 1 0.0000 0.917 1.00 0.00 0.00
#> HSPC_132 2 0.2537 0.898 0.00 0.92 0.08
#> LT-HSC_043 2 0.6280 0.135 0.00 0.54 0.46
#> Prog_141 2 0.0000 0.970 0.00 1.00 0.00
#> Prog_129 3 0.0000 0.941 0.00 0.00 1.00
#> Prog_136 1 0.3686 0.803 0.86 0.14 0.00
#> Prog_130 1 0.0000 0.917 1.00 0.00 0.00
#> Prog_143 3 0.1529 0.909 0.04 0.00 0.96
#> Prog_150 1 0.0000 0.917 1.00 0.00 0.00
#> Prog_168 1 0.0000 0.917 1.00 0.00 0.00
#> Prog_132 1 0.8538 0.159 0.52 0.10 0.38
#> LT-HSC_055 2 0.0000 0.970 0.00 1.00 0.00
#> LT-HSC_056 1 0.0000 0.917 1.00 0.00 0.00
#> Prog_183 2 0.0000 0.970 0.00 1.00 0.00
#> Prog_184 1 0.0000 0.917 1.00 0.00 0.00
#> Prog_179 3 0.0000 0.941 0.00 0.00 1.00
#> Prog_197 1 0.0000 0.917 1.00 0.00 0.00
#> Prog_203 2 0.0000 0.970 0.00 1.00 0.00
#> Prog_209 3 0.0000 0.941 0.00 0.00 1.00
#> LT-HSC_060 3 0.0000 0.941 0.00 0.00 1.00
#> Prog_224 2 0.0892 0.953 0.00 0.98 0.02
#> Prog_231 2 0.0000 0.970 0.00 1.00 0.00
#> Prog_243 3 0.5948 0.467 0.36 0.00 0.64
#> Prog_227 2 0.0000 0.970 0.00 1.00 0.00
#> Prog_228 3 0.0000 0.941 0.00 0.00 1.00
#> HSPC_261 2 0.0000 0.970 0.00 1.00 0.00
#> HSPC_269 3 0.7683 0.529 0.08 0.28 0.64
#> HSPC_275 3 0.2066 0.892 0.06 0.00 0.94
#> Prog_267 3 0.0000 0.941 0.00 0.00 1.00
#> Prog_273 1 0.0000 0.917 1.00 0.00 0.00
#> Prog_263 3 0.0000 0.941 0.00 0.00 1.00
#> Prog_287 1 0.0000 0.917 1.00 0.00 0.00
#> Prog_270 3 0.0000 0.941 0.00 0.00 1.00
#> Prog_258 1 0.2959 0.841 0.90 0.10 0.00
#> Prog_319 2 0.0000 0.970 0.00 1.00 0.00
#> Prog_330 2 0.0000 0.970 0.00 1.00 0.00
#> Prog_336 2 0.1529 0.937 0.00 0.96 0.04
#> Prog_300 3 0.0000 0.941 0.00 0.00 1.00
#> HSPC_343 1 0.0000 0.917 1.00 0.00 0.00
#> HSPC_370 1 0.0000 0.917 1.00 0.00 0.00
#> HSPC_342 3 0.0000 0.941 0.00 0.00 1.00
#> Prog_343 2 0.0000 0.970 0.00 1.00 0.00
#> Prog_367 3 0.0000 0.941 0.00 0.00 1.00
#> LT-HSC_103 2 0.0000 0.970 0.00 1.00 0.00
#> Prog_353 2 0.0000 0.970 0.00 1.00 0.00
#> HSPC_412 1 0.0000 0.917 1.00 0.00 0.00
#> HSPC_407 3 0.2066 0.892 0.06 0.00 0.94
#> HSPC_419 1 0.0000 0.917 1.00 0.00 0.00
#> Prog_387 3 0.5706 0.490 0.32 0.00 0.68
#> Prog_389 2 0.0000 0.970 0.00 1.00 0.00
#> Prog_401 1 0.2959 0.838 0.90 0.10 0.00
#> Prog_414 1 0.0000 0.917 1.00 0.00 0.00
#> HSPC_436 2 0.0000 0.970 0.00 1.00 0.00
#> HSPC_454 2 0.0000 0.970 0.00 1.00 0.00
#> Prog_451 1 0.0000 0.917 1.00 0.00 0.00
#> Prog_437 2 0.0000 0.970 0.00 1.00 0.00
#> Prog_443 3 0.0000 0.941 0.00 0.00 1.00
#> HSPC_508 3 0.0000 0.941 0.00 0.00 1.00
#> Prog_475 1 0.0000 0.917 1.00 0.00 0.00
#> Prog_487 1 0.4796 0.727 0.78 0.00 0.22
#> Prog_505 1 0.0000 0.917 1.00 0.00 0.00
#> Prog_488 3 0.0000 0.941 0.00 0.00 1.00
#> Prog_500 1 0.0000 0.917 1.00 0.00 0.00
#> LT-HSC_130 2 0.0000 0.970 0.00 1.00 0.00
#> Prog_485 2 0.0000 0.970 0.00 1.00 0.00
#> Prog_491 1 0.4796 0.727 0.78 0.00 0.22
#> Prog_529 3 0.0000 0.941 0.00 0.00 1.00
#> Prog_541 3 0.0000 0.941 0.00 0.00 1.00
#> Prog_547 3 0.4796 0.687 0.00 0.22 0.78
#> Prog_531 1 0.0000 0.917 1.00 0.00 0.00
#> Prog_520 1 0.5016 0.700 0.76 0.00 0.24
#> LT-HSC_143 2 0.0000 0.970 0.00 1.00 0.00
#> HSPC_553 1 0.0000 0.917 1.00 0.00 0.00
#> Prog_569 3 0.0000 0.941 0.00 0.00 1.00
#> Prog_587 2 0.0000 0.970 0.00 1.00 0.00
#> Prog_602 2 0.0000 0.970 0.00 1.00 0.00
#> Prog_614 2 0.0000 0.970 0.00 1.00 0.00
#> Prog_623 2 0.0000 0.970 0.00 1.00 0.00
#> Prog_612 3 0.0000 0.941 0.00 0.00 1.00
#> Prog_630 3 0.5948 0.451 0.36 0.00 0.64
#> LT-HSC_168 3 0.0000 0.941 0.00 0.00 1.00
#> HSPC_644 2 0.0000 0.970 0.00 1.00 0.00
#> HSPC_638 2 0.0000 0.970 0.00 1.00 0.00
#> Prog_661 1 0.0892 0.906 0.98 0.00 0.02
#> Prog_654 2 0.4796 0.708 0.22 0.78 0.00
#> HSPC_695 2 0.0000 0.970 0.00 1.00 0.00
#> Prog_698 1 0.0000 0.917 1.00 0.00 0.00
#> Prog_681 1 0.0000 0.917 1.00 0.00 0.00
#> Prog_706 1 0.4796 0.727 0.78 0.00 0.22
#> Prog_712 2 0.0000 0.970 0.00 1.00 0.00
#> Prog_682 2 0.2537 0.900 0.00 0.92 0.08
#> Prog_713 3 0.0000 0.941 0.00 0.00 1.00
#> Prog_753 3 0.0000 0.941 0.00 0.00 1.00
#> Prog_736 3 0.0000 0.941 0.00 0.00 1.00
#> Prog_754 1 0.0000 0.917 1.00 0.00 0.00
#> Prog_793 2 0.0000 0.970 0.00 1.00 0.00
#> Prog_801 2 0.0000 0.970 0.00 1.00 0.00
#> Prog_765 1 0.6045 0.452 0.62 0.00 0.38
#> Prog_779 3 0.0000 0.941 0.00 0.00 1.00
#> Prog_792 1 0.0000 0.917 1.00 0.00 0.00
#> Prog_798 1 0.4796 0.727 0.78 0.00 0.22
#> Prog_817 2 0.0000 0.970 0.00 1.00 0.00
#> Prog_836 3 0.0000 0.941 0.00 0.00 1.00
#> Prog_843 1 0.0000 0.917 1.00 0.00 0.00
#> Prog_820 2 0.4796 0.705 0.22 0.78 0.00
#> Prog_839 3 0.0000 0.941 0.00 0.00 1.00
#> Prog_845 1 0.4796 0.727 0.78 0.00 0.22
#> Prog_809 1 0.6280 0.124 0.54 0.46 0.00
#> Prog_810 1 0.1529 0.893 0.96 0.00 0.04
cbind(get_classes(res, k = 4), get_membership(res, k = 4))
#> class entropy silhouette p1 p2 p3 p4
#> Prog_019 1 0.4713 0.4085 0.64 0.00 0.00 0.36
#> Prog_043 2 0.4522 0.6784 0.00 0.68 0.00 0.32
#> Prog_057 1 0.4406 0.3932 0.70 0.00 0.00 0.30
#> Prog_045 2 0.3172 0.8171 0.00 0.84 0.00 0.16
#> Prog_065 1 0.4134 0.4779 0.74 0.00 0.00 0.26
#> Prog_117 2 0.3610 0.7616 0.00 0.80 0.00 0.20
#> Prog_101 4 0.4790 0.1604 0.38 0.00 0.00 0.62
#> HSPC_132 2 0.4797 0.6746 0.00 0.72 0.26 0.02
#> LT-HSC_043 2 0.5535 0.4349 0.00 0.56 0.42 0.02
#> Prog_141 2 0.1637 0.8480 0.00 0.94 0.00 0.06
#> Prog_129 3 0.4277 0.8162 0.28 0.00 0.72 0.00
#> Prog_136 4 0.5657 0.4889 0.12 0.16 0.00 0.72
#> Prog_130 1 0.4977 0.2438 0.54 0.00 0.00 0.46
#> Prog_143 3 0.6104 0.7305 0.18 0.00 0.68 0.14
#> Prog_150 4 0.2921 0.5307 0.14 0.00 0.00 0.86
#> Prog_168 1 0.0707 0.5470 0.98 0.00 0.00 0.02
#> Prog_132 4 0.7446 0.3432 0.12 0.04 0.24 0.60
#> LT-HSC_055 2 0.0000 0.8604 0.00 1.00 0.00 0.00
#> LT-HSC_056 4 0.5957 0.0101 0.42 0.00 0.04 0.54
#> Prog_183 2 0.4994 0.2913 0.00 0.52 0.00 0.48
#> Prog_184 1 0.3172 0.5299 0.84 0.00 0.00 0.16
#> Prog_179 3 0.4277 0.8162 0.28 0.00 0.72 0.00
#> Prog_197 1 0.4522 0.4452 0.68 0.00 0.00 0.32
#> Prog_203 2 0.1211 0.8547 0.00 0.96 0.00 0.04
#> Prog_209 3 0.0000 0.7763 0.00 0.00 1.00 0.00
#> LT-HSC_060 3 0.4277 0.8162 0.28 0.00 0.72 0.00
#> Prog_224 2 0.4553 0.7379 0.00 0.78 0.18 0.04
#> Prog_231 2 0.1637 0.8502 0.00 0.94 0.00 0.06
#> Prog_243 1 0.7745 0.1370 0.42 0.00 0.34 0.24
#> Prog_227 2 0.2647 0.8358 0.00 0.88 0.00 0.12
#> Prog_228 3 0.0000 0.7763 0.00 0.00 1.00 0.00
#> HSPC_261 2 0.0000 0.8604 0.00 1.00 0.00 0.00
#> HSPC_269 3 0.7845 -0.0391 0.00 0.28 0.40 0.32
#> HSPC_275 3 0.5487 0.6234 0.40 0.00 0.58 0.02
#> Prog_267 3 0.4277 0.8162 0.28 0.00 0.72 0.00
#> Prog_273 1 0.4624 0.4050 0.66 0.00 0.00 0.34
#> Prog_263 3 0.1637 0.8036 0.06 0.00 0.94 0.00
#> Prog_287 1 0.4977 0.2097 0.54 0.00 0.00 0.46
#> Prog_270 3 0.4277 0.8162 0.28 0.00 0.72 0.00
#> Prog_258 4 0.6449 0.4245 0.22 0.14 0.00 0.64
#> Prog_319 2 0.1211 0.8496 0.00 0.96 0.00 0.04
#> Prog_330 2 0.2011 0.8387 0.00 0.92 0.00 0.08
#> Prog_336 2 0.5489 0.6738 0.00 0.70 0.24 0.06
#> Prog_300 3 0.0000 0.7763 0.00 0.00 1.00 0.00
#> HSPC_343 4 0.2345 0.5388 0.10 0.00 0.00 0.90
#> HSPC_370 1 0.4624 0.4311 0.66 0.00 0.00 0.34
#> HSPC_342 3 0.3801 0.8225 0.22 0.00 0.78 0.00
#> Prog_343 2 0.1637 0.8502 0.00 0.94 0.00 0.06
#> Prog_367 3 0.3335 0.8169 0.12 0.00 0.86 0.02
#> LT-HSC_103 2 0.1637 0.8539 0.00 0.94 0.00 0.06
#> Prog_353 2 0.4907 0.5282 0.00 0.58 0.00 0.42
#> HSPC_412 1 0.4855 0.3528 0.60 0.00 0.00 0.40
#> HSPC_407 3 0.5271 0.7172 0.34 0.00 0.64 0.02
#> HSPC_419 1 0.4855 0.3528 0.60 0.00 0.00 0.40
#> Prog_387 1 0.6262 -0.2244 0.54 0.00 0.40 0.06
#> Prog_389 2 0.4522 0.6784 0.00 0.68 0.00 0.32
#> Prog_401 4 0.4332 0.4709 0.16 0.04 0.00 0.80
#> Prog_414 4 0.4790 0.2726 0.38 0.00 0.00 0.62
#> HSPC_436 2 0.0000 0.8604 0.00 1.00 0.00 0.00
#> HSPC_454 2 0.4277 0.6740 0.00 0.72 0.00 0.28
#> Prog_451 4 0.4790 0.2681 0.38 0.00 0.00 0.62
#> Prog_437 2 0.0000 0.8604 0.00 1.00 0.00 0.00
#> Prog_443 3 0.4277 0.8162 0.28 0.00 0.72 0.00
#> HSPC_508 3 0.0000 0.7763 0.00 0.00 1.00 0.00
#> Prog_475 1 0.4624 0.4311 0.66 0.00 0.00 0.34
#> Prog_487 1 0.0000 0.5461 1.00 0.00 0.00 0.00
#> Prog_505 1 0.4790 0.3831 0.62 0.00 0.00 0.38
#> Prog_488 3 0.4277 0.8162 0.28 0.00 0.72 0.00
#> Prog_500 1 0.4713 0.4085 0.64 0.00 0.00 0.36
#> LT-HSC_130 2 0.0000 0.8604 0.00 1.00 0.00 0.00
#> Prog_485 2 0.0707 0.8577 0.00 0.98 0.02 0.00
#> Prog_491 1 0.0000 0.5461 1.00 0.00 0.00 0.00
#> Prog_529 3 0.0000 0.7763 0.00 0.00 1.00 0.00
#> Prog_541 3 0.4277 0.8162 0.28 0.00 0.72 0.00
#> Prog_547 3 0.4491 0.5798 0.00 0.14 0.80 0.06
#> Prog_531 4 0.3975 0.4667 0.24 0.00 0.00 0.76
#> Prog_520 1 0.4292 0.4054 0.82 0.00 0.10 0.08
#> LT-HSC_143 2 0.0000 0.8604 0.00 1.00 0.00 0.00
#> HSPC_553 1 0.4907 0.3235 0.58 0.00 0.00 0.42
#> Prog_569 3 0.7028 0.6885 0.28 0.00 0.56 0.16
#> Prog_587 2 0.6320 0.6916 0.00 0.66 0.16 0.18
#> Prog_602 2 0.0000 0.8604 0.00 1.00 0.00 0.00
#> Prog_614 2 0.3975 0.7622 0.00 0.76 0.00 0.24
#> Prog_623 2 0.1211 0.8496 0.00 0.96 0.00 0.04
#> Prog_612 3 0.2647 0.8184 0.12 0.00 0.88 0.00
#> Prog_630 1 0.5327 0.3653 0.72 0.00 0.22 0.06
#> LT-HSC_168 3 0.3172 0.8237 0.16 0.00 0.84 0.00
#> HSPC_644 2 0.0000 0.8604 0.00 1.00 0.00 0.00
#> HSPC_638 2 0.0000 0.8604 0.00 1.00 0.00 0.00
#> Prog_661 1 0.4797 0.2997 0.72 0.00 0.02 0.26
#> Prog_654 4 0.4277 0.3545 0.00 0.28 0.00 0.72
#> HSPC_695 2 0.1411 0.8565 0.00 0.96 0.02 0.02
#> Prog_698 1 0.3801 0.5009 0.78 0.00 0.00 0.22
#> Prog_681 4 0.4406 0.3762 0.30 0.00 0.00 0.70
#> Prog_706 1 0.0000 0.5461 1.00 0.00 0.00 0.00
#> Prog_712 2 0.2830 0.8380 0.00 0.90 0.04 0.06
#> Prog_682 2 0.6382 0.5370 0.00 0.58 0.34 0.08
#> Prog_713 3 0.0707 0.7646 0.00 0.00 0.98 0.02
#> Prog_753 3 0.4277 0.8162 0.28 0.00 0.72 0.00
#> Prog_736 3 0.1637 0.8035 0.06 0.00 0.94 0.00
#> Prog_754 1 0.4624 0.3257 0.66 0.00 0.00 0.34
#> Prog_793 2 0.0707 0.8598 0.00 0.98 0.00 0.02
#> Prog_801 2 0.0707 0.8589 0.00 0.98 0.00 0.02
#> Prog_765 1 0.6594 0.1807 0.62 0.00 0.14 0.24
#> Prog_779 3 0.4277 0.8162 0.28 0.00 0.72 0.00
#> Prog_792 1 0.0000 0.5461 1.00 0.00 0.00 0.00
#> Prog_798 1 0.0000 0.5461 1.00 0.00 0.00 0.00
#> Prog_817 2 0.1211 0.8548 0.00 0.96 0.00 0.04
#> Prog_836 3 0.3975 0.8232 0.24 0.00 0.76 0.00
#> Prog_843 1 0.3975 0.4934 0.76 0.00 0.00 0.24
#> Prog_820 4 0.6201 0.2645 0.08 0.30 0.00 0.62
#> Prog_839 3 0.0000 0.7763 0.00 0.00 1.00 0.00
#> Prog_845 1 0.0000 0.5461 1.00 0.00 0.00 0.00
#> Prog_809 1 0.7456 -0.1396 0.46 0.36 0.00 0.18
#> Prog_810 1 0.0000 0.5461 1.00 0.00 0.00 0.00
Heatmaps for the consensus matrix. It visualizes the probability of two samples to be in a same group.
consensus_heatmap(res, k = 2)
consensus_heatmap(res, k = 3)
consensus_heatmap(res, k = 4)
Heatmaps for the membership of samples in all partitions to see how consistent they are:
membership_heatmap(res, k = 2)
membership_heatmap(res, k = 3)
membership_heatmap(res, k = 4)
As soon as the classes for columns are determined, the signatures that are significantly different between subgroups can be looked for. Following are the heatmaps for signatures.
Signature heatmaps where rows are scaled:
Signature heatmaps where rows are not scaled:
get_signatures(res, k = 2, scale_rows = FALSE)
get_signatures(res, k = 3, scale_rows = FALSE)
get_signatures(res, k = 4, scale_rows = FALSE)
Compare the overlap of signatures from different k:
compare_signatures(res)
get_signature() returns a data frame invisibly. To get the list of signatures, the function
call should be assigned to a variable explicitly. In following code, if plot argument is set
to FALSE, no heatmap is plotted while only the differential analysis is performed.
# code only for demonstration
tb = get_signature(res, k = ..., plot = FALSE)
An example of the output of tb is:
#> which_row fdr mean_1 mean_2 scaled_mean_1 scaled_mean_2 km
#> 1 38 0.042760348 8.373488 9.131774 -0.5533452 0.5164555 1
#> 2 40 0.018707592 7.106213 8.469186 -0.6173731 0.5762149 1
#> 3 55 0.019134737 10.221463 11.207825 -0.6159697 0.5749050 1
#> 4 59 0.006059896 5.921854 7.869574 -0.6899429 0.6439467 1
#> 5 60 0.018055526 8.928898 10.211722 -0.6204761 0.5791110 1
#> 6 98 0.009384629 15.714769 14.887706 0.6635654 -0.6193277 2
...
The columns in tb are:
which_row: row indices corresponding to the input matrix.fdr: FDR for the differential test. mean_x: The mean value in group x.scaled_mean_x: The mean value in group x after rows are scaled.km: Row groups if k-means clustering is applied to rows (which is done by automatically selecting number of clusters).If there are too many signatures, top_signatures = ... can be set to only show the
signatures with the highest FDRs:
# code only for demonstration
# e.g. to show the top 500 most significant rows
tb = get_signature(res, k = ..., top_signatures = 500)
If the signatures are defined as these which are uniquely high in current group, diff_method argument
can be set to "uniquely_high_in_one_group":
# code only for demonstration
tb = get_signature(res, k = ..., diff_method = "uniquely_high_in_one_group")
UMAP plot which shows how samples are separated.
dimension_reduction(res, k = 2, method = "UMAP")
dimension_reduction(res, k = 3, method = "UMAP")
dimension_reduction(res, k = 4, method = "UMAP")
Following heatmap shows how subgroups are split when increasing k:
collect_classes(res)
If matrix rows can be associated to genes, consider to use functional_enrichment(res,
...) to perform function enrichment for the signature genes. See this vignette for more detailed explanations.
Parent node: Node013. Child nodes: Node01111-leaf , Node01112-leaf , Node01113-leaf , Node01121-leaf , Node01122-leaf , Node01211-leaf , Node01212-leaf , Node01213-leaf , Node01221-leaf , Node01222-leaf , Node01223-leaf , Node01311-leaf , Node01312-leaf , Node02111-leaf , Node02112-leaf , Node02121-leaf , Node02122-leaf .
The object with results only for a single top-value method and a single partitioning method can be extracted as:
res = res_rh["0131"]
A summary of res and all the functions that can be applied to it:
res
#> A 'ConsensusPartition' object with k = 2, 3, 4.
#> On a matrix with 16730 rows and 68 columns.
#> Top rows (1673) are extracted by 'ATC' method.
#> Subgroups are detected by 'skmeans' method.
#> Performed in total 150 partitions by row resampling.
#> Best k for subgroups seems to be 2.
#>
#> Following methods can be applied to this 'ConsensusPartition' object:
#> [1] "cola_report" "collect_classes" "collect_plots"
#> [4] "collect_stats" "colnames" "compare_partitions"
#> [7] "compare_signatures" "consensus_heatmap" "dimension_reduction"
#> [10] "functional_enrichment" "get_anno_col" "get_anno"
#> [13] "get_classes" "get_consensus" "get_matrix"
#> [16] "get_membership" "get_param" "get_signatures"
#> [19] "get_stats" "is_best_k" "is_stable_k"
#> [22] "membership_heatmap" "ncol" "nrow"
#> [25] "plot_ecdf" "predict_classes" "rownames"
#> [28] "select_partition_number" "show" "suggest_best_k"
#> [31] "test_to_known_factors" "top_rows_heatmap"
collect_plots() function collects all the plots made from res for all k (number of subgroups)
into one single page to provide an easy and fast comparison between different k.
collect_plots(res)
The plots are:
k and the heatmap of
predicted classes for each k.k.k.k.All the plots in panels can be made by individual functions and they are plotted later in this section.
select_partition_number() produces several plots showing different
statistics for choosing “optimized” k. There are following statistics:
k;k, the area increased is defined as \(A_k - A_{k-1}\).The detailed explanations of these statistics can be found in the cola vignette.
Generally speaking, higher 1-PAC score, higher mean silhouette score or higher
concordance corresponds to better partition. Rand index and Jaccard index
measure how similar the current partition is compared to partition with k-1.
If they are too similar, we won't accept k is better than k-1.
select_partition_number(res)
The numeric values for all these statistics can be obtained by get_stats().
get_stats(res)
#> k 1-PAC mean_silhouette concordance area_increased Rand Jaccard
#> 2 2 1.000 0.954 0.981 0.508 0.493 0.493
#> 3 3 0.769 0.810 0.899 0.273 0.815 0.644
#> 4 4 0.682 0.723 0.855 0.105 0.932 0.815
suggest_best_k() suggests the best \(k\) based on these statistics. The rules are as follows:
suggest_best_k(res)
#> [1] 2
Following is the table of the partitions (You need to click the show/hide
code output link to see it). The membership matrix (columns with name p*)
is inferred by
clue::cl_consensus()
function with the SE method. Basically the value in the membership matrix
represents the probability to belong to a certain group. The finall subgroup
label for an item is determined with the group with highest probability it
belongs to.
In get_classes() function, the entropy is calculated from the membership
matrix and the silhouette score is calculated from the consensus matrix.
cbind(get_classes(res, k = 2), get_membership(res, k = 2))
#> class entropy silhouette p1 p2
#> Prog_019 2 0.000 0.964 0.00 1.00
#> Prog_057 2 0.000 0.964 0.00 1.00
#> Prog_065 2 0.000 0.964 0.00 1.00
#> Prog_101 2 0.000 0.964 0.00 1.00
#> Prog_129 1 0.000 0.999 1.00 0.00
#> Prog_130 2 0.000 0.964 0.00 1.00
#> Prog_143 2 0.000 0.964 0.00 1.00
#> Prog_150 2 0.000 0.964 0.00 1.00
#> Prog_168 2 0.000 0.964 0.00 1.00
#> Prog_132 2 0.000 0.964 0.00 1.00
#> LT-HSC_056 2 0.000 0.964 0.00 1.00
#> Prog_184 2 0.000 0.964 0.00 1.00
#> Prog_179 1 0.000 0.999 1.00 0.00
#> Prog_197 2 0.000 0.964 0.00 1.00
#> Prog_209 1 0.000 0.999 1.00 0.00
#> LT-HSC_060 1 0.000 0.999 1.00 0.00
#> Prog_243 2 0.000 0.964 0.00 1.00
#> Prog_228 1 0.000 0.999 1.00 0.00
#> HSPC_275 2 0.327 0.910 0.06 0.94
#> Prog_267 1 0.000 0.999 1.00 0.00
#> Prog_273 2 0.000 0.964 0.00 1.00
#> Prog_263 1 0.000 0.999 1.00 0.00
#> Prog_287 2 0.000 0.964 0.00 1.00
#> Prog_270 1 0.000 0.999 1.00 0.00
#> Prog_300 1 0.000 0.999 1.00 0.00
#> HSPC_370 2 0.000 0.964 0.00 1.00
#> HSPC_342 1 0.000 0.999 1.00 0.00
#> Prog_367 2 0.958 0.406 0.38 0.62
#> HSPC_412 2 0.000 0.964 0.00 1.00
#> HSPC_407 1 0.242 0.956 0.96 0.04
#> HSPC_419 2 0.000 0.964 0.00 1.00
#> Prog_387 1 0.000 0.999 1.00 0.00
#> Prog_414 2 0.000 0.964 0.00 1.00
#> Prog_451 2 0.000 0.964 0.00 1.00
#> Prog_443 1 0.000 0.999 1.00 0.00
#> HSPC_508 1 0.000 0.999 1.00 0.00
#> Prog_475 2 0.000 0.964 0.00 1.00
#> Prog_487 2 0.958 0.415 0.38 0.62
#> Prog_505 2 0.000 0.964 0.00 1.00
#> Prog_488 1 0.000 0.999 1.00 0.00
#> Prog_500 2 0.000 0.964 0.00 1.00
#> Prog_491 1 0.000 0.999 1.00 0.00
#> Prog_529 1 0.000 0.999 1.00 0.00
#> Prog_541 1 0.000 0.999 1.00 0.00
#> Prog_531 2 0.000 0.964 0.00 1.00
#> Prog_520 1 0.000 0.999 1.00 0.00
#> HSPC_553 2 0.000 0.964 0.00 1.00
#> Prog_569 1 0.000 0.999 1.00 0.00
#> Prog_612 1 0.000 0.999 1.00 0.00
#> Prog_630 2 0.000 0.964 0.00 1.00
#> LT-HSC_168 1 0.000 0.999 1.00 0.00
#> Prog_661 2 0.000 0.964 0.00 1.00
#> Prog_698 2 0.000 0.964 0.00 1.00
#> Prog_681 2 0.000 0.964 0.00 1.00
#> Prog_706 1 0.000 0.999 1.00 0.00
#> Prog_713 1 0.000 0.999 1.00 0.00
#> Prog_753 1 0.000 0.999 1.00 0.00
#> Prog_736 1 0.000 0.999 1.00 0.00
#> Prog_754 2 0.971 0.365 0.40 0.60
#> Prog_765 1 0.000 0.999 1.00 0.00
#> Prog_779 1 0.000 0.999 1.00 0.00
#> Prog_792 2 0.000 0.964 0.00 1.00
#> Prog_798 1 0.000 0.999 1.00 0.00
#> Prog_836 1 0.000 0.999 1.00 0.00
#> Prog_843 2 0.000 0.964 0.00 1.00
#> Prog_839 1 0.000 0.999 1.00 0.00
#> Prog_845 1 0.000 0.999 1.00 0.00
#> Prog_810 1 0.000 0.999 1.00 0.00
cbind(get_classes(res, k = 3), get_membership(res, k = 3))
#> class entropy silhouette p1 p2 p3
#> Prog_019 2 0.0000 0.9493 0.00 1.00 0.00
#> Prog_057 2 0.0892 0.9307 0.00 0.98 0.02
#> Prog_065 2 0.0892 0.9304 0.00 0.98 0.02
#> Prog_101 2 0.0000 0.9493 0.00 1.00 0.00
#> Prog_129 1 0.0000 0.7491 1.00 0.00 0.00
#> Prog_130 2 0.0000 0.9493 0.00 1.00 0.00
#> Prog_143 2 0.5706 0.5425 0.00 0.68 0.32
#> Prog_150 2 0.0000 0.9493 0.00 1.00 0.00
#> Prog_168 2 0.5397 0.5434 0.00 0.72 0.28
#> Prog_132 2 0.0000 0.9493 0.00 1.00 0.00
#> LT-HSC_056 2 0.0000 0.9493 0.00 1.00 0.00
#> Prog_184 2 0.0000 0.9493 0.00 1.00 0.00
#> Prog_179 1 0.0000 0.7491 1.00 0.00 0.00
#> Prog_197 2 0.0000 0.9493 0.00 1.00 0.00
#> Prog_209 1 0.5706 0.7927 0.68 0.00 0.32
#> LT-HSC_060 1 0.0000 0.7491 1.00 0.00 0.00
#> Prog_243 2 0.0000 0.9493 0.00 1.00 0.00
#> Prog_228 1 0.5706 0.7927 0.68 0.00 0.32
#> HSPC_275 2 0.9593 -0.0428 0.20 0.42 0.38
#> Prog_267 1 0.2959 0.7700 0.90 0.00 0.10
#> Prog_273 2 0.0000 0.9493 0.00 1.00 0.00
#> Prog_263 1 0.5706 0.7927 0.68 0.00 0.32
#> Prog_287 2 0.0000 0.9493 0.00 1.00 0.00
#> Prog_270 1 0.0000 0.7491 1.00 0.00 0.00
#> Prog_300 1 0.5706 0.7927 0.68 0.00 0.32
#> HSPC_370 2 0.0000 0.9493 0.00 1.00 0.00
#> HSPC_342 1 0.5706 0.7927 0.68 0.00 0.32
#> Prog_367 1 0.9083 0.6298 0.52 0.16 0.32
#> HSPC_412 2 0.0000 0.9493 0.00 1.00 0.00
#> HSPC_407 1 0.8587 0.6384 0.50 0.10 0.40
#> HSPC_419 2 0.0000 0.9493 0.00 1.00 0.00
#> Prog_387 1 0.6045 0.7570 0.62 0.00 0.38
#> Prog_414 2 0.0000 0.9493 0.00 1.00 0.00
#> Prog_451 2 0.0000 0.9493 0.00 1.00 0.00
#> Prog_443 1 0.0000 0.7491 1.00 0.00 0.00
#> HSPC_508 1 0.5706 0.7927 0.68 0.00 0.32
#> Prog_475 2 0.0000 0.9493 0.00 1.00 0.00
#> Prog_487 3 0.5706 0.8429 0.32 0.00 0.68
#> Prog_505 2 0.0000 0.9493 0.00 1.00 0.00
#> Prog_488 1 0.0000 0.7491 1.00 0.00 0.00
#> Prog_500 2 0.0000 0.9493 0.00 1.00 0.00
#> Prog_491 3 0.5706 0.8429 0.32 0.00 0.68
#> Prog_529 1 0.5706 0.7927 0.68 0.00 0.32
#> Prog_541 1 0.0000 0.7491 1.00 0.00 0.00
#> Prog_531 2 0.0000 0.9493 0.00 1.00 0.00
#> Prog_520 3 0.5835 0.8246 0.34 0.00 0.66
#> HSPC_553 2 0.0000 0.9493 0.00 1.00 0.00
#> Prog_569 1 0.0000 0.7491 1.00 0.00 0.00
#> Prog_612 1 0.0000 0.7491 1.00 0.00 0.00
#> Prog_630 2 0.0000 0.9493 0.00 1.00 0.00
#> LT-HSC_168 1 0.5560 0.7931 0.70 0.00 0.30
#> Prog_661 2 0.0000 0.9493 0.00 1.00 0.00
#> Prog_698 3 0.5835 0.4966 0.00 0.34 0.66
#> Prog_681 2 0.0000 0.9493 0.00 1.00 0.00
#> Prog_706 3 0.5706 0.8429 0.32 0.00 0.68
#> Prog_713 1 0.5706 0.7927 0.68 0.00 0.32
#> Prog_753 1 0.0000 0.7491 1.00 0.00 0.00
#> Prog_736 1 0.5706 0.7927 0.68 0.00 0.32
#> Prog_754 3 0.5706 0.8429 0.32 0.00 0.68
#> Prog_765 3 0.5706 0.8429 0.32 0.00 0.68
#> Prog_779 1 0.0000 0.7491 1.00 0.00 0.00
#> Prog_792 3 0.5835 0.5007 0.00 0.34 0.66
#> Prog_798 3 0.6045 0.7744 0.38 0.00 0.62
#> Prog_836 1 0.0000 0.7491 1.00 0.00 0.00
#> Prog_843 3 0.6045 0.4181 0.00 0.38 0.62
#> Prog_839 1 0.5706 0.7927 0.68 0.00 0.32
#> Prog_845 3 0.5706 0.8429 0.32 0.00 0.68
#> Prog_810 3 0.5706 0.8429 0.32 0.00 0.68
cbind(get_classes(res, k = 4), get_membership(res, k = 4))
#> class entropy silhouette p1 p2 p3 p4
#> Prog_019 2 0.0000 0.900 0.00 1.00 0.00 0.00
#> Prog_057 2 0.4894 0.783 0.00 0.78 0.12 0.10
#> Prog_065 2 0.0707 0.902 0.00 0.98 0.00 0.02
#> Prog_101 2 0.2830 0.878 0.00 0.90 0.06 0.04
#> Prog_129 1 0.0000 0.796 1.00 0.00 0.00 0.00
#> Prog_130 2 0.1913 0.898 0.00 0.94 0.04 0.02
#> Prog_143 4 0.3606 0.629 0.00 0.14 0.02 0.84
#> Prog_150 2 0.0707 0.900 0.00 0.98 0.02 0.00
#> Prog_168 2 0.4642 0.601 0.00 0.74 0.24 0.02
#> Prog_132 2 0.5512 0.664 0.00 0.66 0.04 0.30
#> LT-HSC_056 2 0.2830 0.888 0.00 0.90 0.04 0.06
#> Prog_184 2 0.0000 0.900 0.00 1.00 0.00 0.00
#> Prog_179 1 0.0000 0.796 1.00 0.00 0.00 0.00
#> Prog_197 2 0.1211 0.902 0.00 0.96 0.00 0.04
#> Prog_209 1 0.4713 0.505 0.64 0.00 0.00 0.36
#> LT-HSC_060 1 0.0707 0.792 0.98 0.00 0.00 0.02
#> Prog_243 2 0.4755 0.782 0.00 0.76 0.04 0.20
#> Prog_228 1 0.4522 0.565 0.68 0.00 0.00 0.32
#> HSPC_275 4 0.4011 0.711 0.04 0.06 0.04 0.86
#> Prog_267 1 0.2011 0.769 0.92 0.00 0.00 0.08
#> Prog_273 2 0.0000 0.900 0.00 1.00 0.00 0.00
#> Prog_263 1 0.4406 0.590 0.70 0.00 0.00 0.30
#> Prog_287 2 0.0000 0.900 0.00 1.00 0.00 0.00
#> Prog_270 1 0.1211 0.767 0.96 0.00 0.00 0.04
#> Prog_300 4 0.5000 -0.299 0.50 0.00 0.00 0.50
#> HSPC_370 2 0.1211 0.902 0.00 0.96 0.00 0.04
#> HSPC_342 1 0.4994 0.195 0.52 0.00 0.00 0.48
#> Prog_367 4 0.2706 0.738 0.08 0.02 0.00 0.90
#> HSPC_412 2 0.1211 0.902 0.00 0.96 0.00 0.04
#> HSPC_407 4 0.3522 0.734 0.06 0.04 0.02 0.88
#> HSPC_419 2 0.1637 0.896 0.00 0.94 0.00 0.06
#> Prog_387 4 0.4553 0.616 0.18 0.00 0.04 0.78
#> Prog_414 2 0.1211 0.902 0.00 0.96 0.00 0.04
#> Prog_451 2 0.4088 0.838 0.00 0.82 0.04 0.14
#> Prog_443 1 0.0000 0.796 1.00 0.00 0.00 0.00
#> HSPC_508 1 0.3172 0.726 0.84 0.00 0.00 0.16
#> Prog_475 2 0.1211 0.902 0.00 0.96 0.00 0.04
#> Prog_487 3 0.1411 0.754 0.02 0.02 0.96 0.00
#> Prog_505 2 0.0707 0.902 0.00 0.98 0.00 0.02
#> Prog_488 1 0.0000 0.796 1.00 0.00 0.00 0.00
#> Prog_500 2 0.0000 0.900 0.00 1.00 0.00 0.00
#> Prog_491 3 0.2921 0.752 0.14 0.00 0.86 0.00
#> Prog_529 1 0.3801 0.677 0.78 0.00 0.00 0.22
#> Prog_541 1 0.0000 0.796 1.00 0.00 0.00 0.00
#> Prog_531 2 0.1913 0.898 0.00 0.94 0.04 0.02
#> Prog_520 3 0.6477 0.547 0.30 0.00 0.60 0.10
#> HSPC_553 2 0.5256 0.725 0.00 0.70 0.04 0.26
#> Prog_569 1 0.1637 0.747 0.94 0.00 0.00 0.06
#> Prog_612 1 0.0000 0.796 1.00 0.00 0.00 0.00
#> Prog_630 2 0.5512 0.669 0.00 0.66 0.04 0.30
#> LT-HSC_168 1 0.2647 0.748 0.88 0.00 0.00 0.12
#> Prog_661 2 0.5077 0.759 0.00 0.76 0.08 0.16
#> Prog_698 3 0.6262 0.354 0.00 0.40 0.54 0.06
#> Prog_681 2 0.0707 0.900 0.00 0.98 0.02 0.00
#> Prog_706 3 0.1211 0.758 0.04 0.00 0.96 0.00
#> Prog_713 1 0.4994 0.195 0.52 0.00 0.00 0.48
#> Prog_753 1 0.0000 0.796 1.00 0.00 0.00 0.00
#> Prog_736 1 0.4790 0.468 0.62 0.00 0.00 0.38
#> Prog_754 3 0.4211 0.720 0.02 0.04 0.84 0.10
#> Prog_765 3 0.6477 0.527 0.30 0.00 0.60 0.10
#> Prog_779 1 0.0000 0.796 1.00 0.00 0.00 0.00
#> Prog_792 3 0.2647 0.717 0.00 0.12 0.88 0.00
#> Prog_798 3 0.3400 0.720 0.18 0.00 0.82 0.00
#> Prog_836 1 0.0000 0.796 1.00 0.00 0.00 0.00
#> Prog_843 3 0.4790 0.430 0.00 0.38 0.62 0.00
#> Prog_839 1 0.4855 0.412 0.60 0.00 0.00 0.40
#> Prog_845 3 0.2647 0.759 0.12 0.00 0.88 0.00
#> Prog_810 3 0.2011 0.762 0.08 0.00 0.92 0.00
Heatmaps for the consensus matrix. It visualizes the probability of two samples to be in a same group.
consensus_heatmap(res, k = 2)
consensus_heatmap(res, k = 3)
consensus_heatmap(res, k = 4)
Heatmaps for the membership of samples in all partitions to see how consistent they are:
membership_heatmap(res, k = 2)
membership_heatmap(res, k = 3)
membership_heatmap(res, k = 4)
As soon as the classes for columns are determined, the signatures that are significantly different between subgroups can be looked for. Following are the heatmaps for signatures.
Signature heatmaps where rows are scaled:
Signature heatmaps where rows are not scaled:
get_signatures(res, k = 2, scale_rows = FALSE)
get_signatures(res, k = 3, scale_rows = FALSE)
get_signatures(res, k = 4, scale_rows = FALSE)
Compare the overlap of signatures from different k:
compare_signatures(res)
get_signature() returns a data frame invisibly. To get the list of signatures, the function
call should be assigned to a variable explicitly. In following code, if plot argument is set
to FALSE, no heatmap is plotted while only the differential analysis is performed.
# code only for demonstration
tb = get_signature(res, k = ..., plot = FALSE)
An example of the output of tb is:
#> which_row fdr mean_1 mean_2 scaled_mean_1 scaled_mean_2 km
#> 1 38 0.042760348 8.373488 9.131774 -0.5533452 0.5164555 1
#> 2 40 0.018707592 7.106213 8.469186 -0.6173731 0.5762149 1
#> 3 55 0.019134737 10.221463 11.207825 -0.6159697 0.5749050 1
#> 4 59 0.006059896 5.921854 7.869574 -0.6899429 0.6439467 1
#> 5 60 0.018055526 8.928898 10.211722 -0.6204761 0.5791110 1
#> 6 98 0.009384629 15.714769 14.887706 0.6635654 -0.6193277 2
...
The columns in tb are:
which_row: row indices corresponding to the input matrix.fdr: FDR for the differential test. mean_x: The mean value in group x.scaled_mean_x: The mean value in group x after rows are scaled.km: Row groups if k-means clustering is applied to rows (which is done by automatically selecting number of clusters).If there are too many signatures, top_signatures = ... can be set to only show the
signatures with the highest FDRs:
# code only for demonstration
# e.g. to show the top 500 most significant rows
tb = get_signature(res, k = ..., top_signatures = 500)
If the signatures are defined as these which are uniquely high in current group, diff_method argument
can be set to "uniquely_high_in_one_group":
# code only for demonstration
tb = get_signature(res, k = ..., diff_method = "uniquely_high_in_one_group")
UMAP plot which shows how samples are separated.
dimension_reduction(res, k = 2, method = "UMAP")
dimension_reduction(res, k = 3, method = "UMAP")
dimension_reduction(res, k = 4, method = "UMAP")
Following heatmap shows how subgroups are split when increasing k:
collect_classes(res)
If matrix rows can be associated to genes, consider to use functional_enrichment(res,
...) to perform function enrichment for the signature genes. See this vignette for more detailed explanations.
Parent node: Node01. Child nodes: Node0111 , Node0112 , Node0121 , Node0122 , Node0131 , Node0132-leaf , Node0141-leaf , Node0142-leaf , Node0211 , Node0212 , Node0213-leaf , Node0311-leaf , Node0312-leaf , Node0321-leaf , Node0322-leaf , Node0331-leaf , Node0332-leaf , Node0411-leaf , Node0412-leaf , Node0413-leaf , Node0421-leaf , Node0422-leaf , Node0423-leaf .
The object with results only for a single top-value method and a single partitioning method can be extracted as:
res = res_rh["014"]
A summary of res and all the functions that can be applied to it:
res
#> A 'ConsensusPartition' object with k = 2, 3, 4.
#> On a matrix with 16323 rows and 81 columns.
#> Top rows (1632) are extracted by 'ATC' method.
#> Subgroups are detected by 'skmeans' method.
#> Performed in total 150 partitions by row resampling.
#> Best k for subgroups seems to be 3.
#>
#> Following methods can be applied to this 'ConsensusPartition' object:
#> [1] "cola_report" "collect_classes" "collect_plots"
#> [4] "collect_stats" "colnames" "compare_partitions"
#> [7] "compare_signatures" "consensus_heatmap" "dimension_reduction"
#> [10] "functional_enrichment" "get_anno_col" "get_anno"
#> [13] "get_classes" "get_consensus" "get_matrix"
#> [16] "get_membership" "get_param" "get_signatures"
#> [19] "get_stats" "is_best_k" "is_stable_k"
#> [22] "membership_heatmap" "ncol" "nrow"
#> [25] "plot_ecdf" "predict_classes" "rownames"
#> [28] "select_partition_number" "show" "suggest_best_k"
#> [31] "test_to_known_factors" "top_rows_heatmap"
collect_plots() function collects all the plots made from res for all k (number of subgroups)
into one single page to provide an easy and fast comparison between different k.
collect_plots(res)
The plots are:
k and the heatmap of
predicted classes for each k.k.k.k.All the plots in panels can be made by individual functions and they are plotted later in this section.
select_partition_number() produces several plots showing different
statistics for choosing “optimized” k. There are following statistics:
k;k, the area increased is defined as \(A_k - A_{k-1}\).The detailed explanations of these statistics can be found in the cola vignette.
Generally speaking, higher 1-PAC score, higher mean silhouette score or higher
concordance corresponds to better partition. Rand index and Jaccard index
measure how similar the current partition is compared to partition with k-1.
If they are too similar, we won't accept k is better than k-1.
select_partition_number(res)
The numeric values for all these statistics can be obtained by get_stats().
get_stats(res)
#> k 1-PAC mean_silhouette concordance area_increased Rand Jaccard
#> 2 2 1.000 0.988 0.995 0.499 0.500 0.500
#> 3 3 0.904 0.939 0.969 0.258 0.836 0.684
#> 4 4 0.683 0.658 0.841 0.108 0.923 0.804
suggest_best_k() suggests the best \(k\) based on these statistics. The rules are as follows:
suggest_best_k(res)
#> [1] 3
#> attr(,"optional")
#> [1] 2
There is also optional best \(k\) = 2 that is worth to check.
Following is the table of the partitions (You need to click the show/hide
code output link to see it). The membership matrix (columns with name p*)
is inferred by
clue::cl_consensus()
function with the SE method. Basically the value in the membership matrix
represents the probability to belong to a certain group. The finall subgroup
label for an item is determined with the group with highest probability it
belongs to.
In get_classes() function, the entropy is calculated from the membership
matrix and the silhouette score is calculated from the consensus matrix.
cbind(get_classes(res, k = 2), get_membership(res, k = 2))
#> class entropy silhouette p1 p2
#> Prog_020 2 0.000 0.989 0.00 1.00
#> Prog_032 1 0.000 1.000 1.00 0.00
#> Prog_038 1 0.000 1.000 1.00 0.00
#> Prog_021 1 0.000 1.000 1.00 0.00
#> Prog_011 2 0.000 0.989 0.00 1.00
#> Prog_029 2 0.000 0.989 0.00 1.00
#> Prog_024 2 0.958 0.387 0.38 0.62
#> Prog_067 2 0.000 0.989 0.00 1.00
#> Prog_051 1 0.000 1.000 1.00 0.00
#> Prog_058 2 0.000 0.989 0.00 1.00
#> Prog_064 1 0.000 1.000 1.00 0.00
#> Prog_076 1 0.000 1.000 1.00 0.00
#> Prog_066 2 0.000 0.989 0.00 1.00
#> Prog_078 2 0.000 0.989 0.00 1.00
#> Prog_115 2 0.000 0.989 0.00 1.00
#> Prog_111 2 0.000 0.989 0.00 1.00
#> Prog_094 1 0.000 1.000 1.00 0.00
#> Prog_089 2 0.000 0.989 0.00 1.00
#> Prog_126 1 0.000 1.000 1.00 0.00
#> Prog_166 1 0.000 1.000 1.00 0.00
#> Prog_188 1 0.000 1.000 1.00 0.00
#> Prog_207 2 0.000 0.989 0.00 1.00
#> Prog_172 1 0.000 1.000 1.00 0.00
#> Prog_242 2 0.000 0.989 0.00 1.00
#> Prog_212 1 0.000 1.000 1.00 0.00
#> Prog_250 1 0.000 1.000 1.00 0.00
#> Prog_253 2 0.000 0.989 0.00 1.00
#> Prog_284 2 0.000 0.989 0.00 1.00
#> Prog_261 1 0.000 1.000 1.00 0.00
#> Prog_285 1 0.000 1.000 1.00 0.00
#> Prog_274 1 0.000 1.000 1.00 0.00
#> Prog_281 2 0.000 0.989 0.00 1.00
#> Prog_334 2 0.000 0.989 0.00 1.00
#> Prog_298 2 0.000 0.989 0.00 1.00
#> Prog_361 1 0.000 1.000 1.00 0.00
#> Prog_350 1 0.000 1.000 1.00 0.00
#> Prog_368 2 0.000 0.989 0.00 1.00
#> Prog_374 1 0.000 1.000 1.00 0.00
#> Prog_351 2 0.000 0.989 0.00 1.00
#> Prog_363 1 0.000 1.000 1.00 0.00
#> Prog_346 1 0.000 1.000 1.00 0.00
#> Prog_340 2 0.000 0.989 0.00 1.00
#> Prog_366 2 0.000 0.989 0.00 1.00
#> HSPC_389 1 0.000 1.000 1.00 0.00
#> Prog_418 1 0.000 1.000 1.00 0.00
#> Prog_425 2 0.000 0.989 0.00 1.00
#> Prog_396 1 0.000 1.000 1.00 0.00
#> Prog_408 1 0.000 1.000 1.00 0.00
#> Prog_457 1 0.000 1.000 1.00 0.00
#> Prog_453 2 0.000 0.989 0.00 1.00
#> LT-HSC_132 1 0.000 1.000 1.00 0.00
#> Prog_543 2 0.000 0.989 0.00 1.00
#> Prog_545 1 0.000 1.000 1.00 0.00
#> Prog_528 2 0.000 0.989 0.00 1.00
#> Prog_566 2 0.000 0.989 0.00 1.00
#> Prog_576 1 0.000 1.000 1.00 0.00
#> Prog_605 1 0.000 1.000 1.00 0.00
#> Prog_637 1 0.000 1.000 1.00 0.00
#> Prog_639 2 0.000 0.989 0.00 1.00
#> Prog_709 1 0.000 1.000 1.00 0.00
#> Prog_702 2 0.000 0.989 0.00 1.00
#> Prog_708 1 0.000 1.000 1.00 0.00
#> Prog_714 1 0.000 1.000 1.00 0.00
#> Prog_720 1 0.000 1.000 1.00 0.00
#> Prog_721 1 0.000 1.000 1.00 0.00
#> Prog_734 2 0.000 0.989 0.00 1.00
#> Prog_722 2 0.000 0.989 0.00 1.00
#> Prog_770 2 0.000 0.989 0.00 1.00
#> Prog_771 2 0.000 0.989 0.00 1.00
#> Prog_783 1 0.000 1.000 1.00 0.00
#> Prog_802 1 0.000 1.000 1.00 0.00
#> Prog_811 2 0.000 0.989 0.00 1.00
#> Prog_835 1 0.000 1.000 1.00 0.00
#> Prog_818 2 0.000 0.989 0.00 1.00
#> Prog_842 1 0.000 1.000 1.00 0.00
#> Prog_831 1 0.000 1.000 1.00 0.00
#> Prog_837 1 0.000 1.000 1.00 0.00
#> Prog_807 1 0.000 1.000 1.00 0.00
#> Prog_844 1 0.000 1.000 1.00 0.00
#> Prog_850 2 0.000 0.989 0.00 1.00
#> Prog_815 1 0.000 1.000 1.00 0.00
cbind(get_classes(res, k = 3), get_membership(res, k = 3))
#> class entropy silhouette p1 p2 p3
#> Prog_020 2 0.0000 0.977 0.00 1.00 0.00
#> Prog_032 3 0.5216 0.683 0.26 0.00 0.74
#> Prog_038 1 0.0000 0.983 1.00 0.00 0.00
#> Prog_021 1 0.5406 0.723 0.78 0.02 0.20
#> Prog_011 2 0.1529 0.953 0.00 0.96 0.04
#> Prog_029 3 0.1529 0.891 0.00 0.04 0.96
#> Prog_024 3 0.0000 0.901 0.00 0.00 1.00
#> Prog_067 3 0.5560 0.548 0.00 0.30 0.70
#> Prog_051 3 0.1529 0.890 0.04 0.00 0.96
#> Prog_058 2 0.0892 0.965 0.00 0.98 0.02
#> Prog_064 1 0.0000 0.983 1.00 0.00 0.00
#> Prog_076 1 0.0000 0.983 1.00 0.00 0.00
#> Prog_066 2 0.0000 0.977 0.00 1.00 0.00
#> Prog_078 2 0.0000 0.977 0.00 1.00 0.00
#> Prog_115 2 0.0000 0.977 0.00 1.00 0.00
#> Prog_111 2 0.1529 0.953 0.00 0.96 0.04
#> Prog_094 1 0.1529 0.948 0.96 0.00 0.04
#> Prog_089 2 0.2066 0.938 0.00 0.94 0.06
#> Prog_126 1 0.0000 0.983 1.00 0.00 0.00
#> Prog_166 1 0.0000 0.983 1.00 0.00 0.00
#> Prog_188 3 0.3340 0.840 0.12 0.00 0.88
#> Prog_207 3 0.2066 0.880 0.00 0.06 0.94
#> Prog_172 1 0.1529 0.948 0.96 0.00 0.04
#> Prog_242 2 0.0000 0.977 0.00 1.00 0.00
#> Prog_212 1 0.0000 0.983 1.00 0.00 0.00
#> Prog_250 1 0.0000 0.983 1.00 0.00 0.00
#> Prog_253 2 0.0000 0.977 0.00 1.00 0.00
#> Prog_284 3 0.0000 0.901 0.00 0.00 1.00
#> Prog_261 3 0.4555 0.768 0.20 0.00 0.80
#> Prog_285 1 0.0000 0.983 1.00 0.00 0.00
#> Prog_274 1 0.0000 0.983 1.00 0.00 0.00
#> Prog_281 2 0.2537 0.921 0.00 0.92 0.08
#> Prog_334 2 0.3686 0.858 0.00 0.86 0.14
#> Prog_298 2 0.0000 0.977 0.00 1.00 0.00
#> Prog_361 1 0.0000 0.983 1.00 0.00 0.00
#> Prog_350 1 0.0000 0.983 1.00 0.00 0.00
#> Prog_368 2 0.4291 0.802 0.00 0.82 0.18
#> Prog_374 1 0.0000 0.983 1.00 0.00 0.00
#> Prog_351 3 0.0000 0.901 0.00 0.00 1.00
#> Prog_363 1 0.0000 0.983 1.00 0.00 0.00
#> Prog_346 1 0.0000 0.983 1.00 0.00 0.00
#> Prog_340 2 0.0000 0.977 0.00 1.00 0.00
#> Prog_366 2 0.0000 0.977 0.00 1.00 0.00
#> HSPC_389 1 0.0000 0.983 1.00 0.00 0.00
#> Prog_418 1 0.0000 0.983 1.00 0.00 0.00
#> Prog_425 3 0.0000 0.901 0.00 0.00 1.00
#> Prog_396 1 0.0000 0.983 1.00 0.00 0.00
#> Prog_408 1 0.0000 0.983 1.00 0.00 0.00
#> Prog_457 3 0.4002 0.808 0.16 0.00 0.84
#> Prog_453 3 0.1529 0.891 0.00 0.04 0.96
#> LT-HSC_132 1 0.0000 0.983 1.00 0.00 0.00
#> Prog_543 2 0.0000 0.977 0.00 1.00 0.00
#> Prog_545 1 0.0000 0.983 1.00 0.00 0.00
#> Prog_528 2 0.0000 0.977 0.00 1.00 0.00
#> Prog_566 2 0.0000 0.977 0.00 1.00 0.00
#> Prog_576 1 0.0000 0.983 1.00 0.00 0.00
#> Prog_605 1 0.0000 0.983 1.00 0.00 0.00
#> Prog_637 1 0.0000 0.983 1.00 0.00 0.00
#> Prog_639 2 0.0000 0.977 0.00 1.00 0.00
#> Prog_709 1 0.0892 0.964 0.98 0.02 0.00
#> Prog_702 3 0.0000 0.901 0.00 0.00 1.00
#> Prog_708 1 0.0000 0.983 1.00 0.00 0.00
#> Prog_714 1 0.0000 0.983 1.00 0.00 0.00
#> Prog_720 1 0.0000 0.983 1.00 0.00 0.00
#> Prog_721 1 0.0000 0.983 1.00 0.00 0.00
#> Prog_734 2 0.0000 0.977 0.00 1.00 0.00
#> Prog_722 2 0.0000 0.977 0.00 1.00 0.00
#> Prog_770 2 0.0000 0.977 0.00 1.00 0.00
#> Prog_771 2 0.0000 0.977 0.00 1.00 0.00
#> Prog_783 1 0.4002 0.813 0.84 0.00 0.16
#> Prog_802 1 0.0000 0.983 1.00 0.00 0.00
#> Prog_811 3 0.2066 0.880 0.00 0.06 0.94
#> Prog_835 1 0.4002 0.804 0.84 0.00 0.16
#> Prog_818 2 0.0000 0.977 0.00 1.00 0.00
#> Prog_842 1 0.0000 0.983 1.00 0.00 0.00
#> Prog_831 1 0.0000 0.983 1.00 0.00 0.00
#> Prog_837 1 0.0000 0.983 1.00 0.00 0.00
#> Prog_807 1 0.0000 0.983 1.00 0.00 0.00
#> Prog_844 1 0.0000 0.983 1.00 0.00 0.00
#> Prog_850 3 0.0000 0.901 0.00 0.00 1.00
#> Prog_815 1 0.0000 0.983 1.00 0.00 0.00
cbind(get_classes(res, k = 4), get_membership(res, k = 4))
#> class entropy silhouette p1 p2 p3 p4
#> Prog_020 2 0.3400 0.746 0.00 0.82 0.00 0.18
#> Prog_032 4 0.7179 0.552 0.38 0.00 0.14 0.48
#> Prog_038 1 0.4277 0.588 0.72 0.00 0.00 0.28
#> Prog_021 4 0.7706 0.267 0.32 0.08 0.06 0.54
#> Prog_011 2 0.4277 0.570 0.00 0.72 0.28 0.00
#> Prog_029 3 0.2830 0.740 0.00 0.06 0.90 0.04
#> Prog_024 3 0.4277 0.410 0.00 0.00 0.72 0.28
#> Prog_067 3 0.7394 0.454 0.00 0.24 0.52 0.24
#> Prog_051 4 0.7220 0.330 0.14 0.00 0.42 0.44
#> Prog_058 2 0.7394 0.266 0.00 0.52 0.24 0.24
#> Prog_064 1 0.0000 0.813 1.00 0.00 0.00 0.00
#> Prog_076 1 0.0707 0.803 0.98 0.00 0.00 0.02
#> Prog_066 2 0.0000 0.873 0.00 1.00 0.00 0.00
#> Prog_078 2 0.0707 0.867 0.00 0.98 0.02 0.00
#> Prog_115 2 0.0000 0.873 0.00 1.00 0.00 0.00
#> Prog_111 2 0.3172 0.750 0.00 0.84 0.16 0.00
#> Prog_094 1 0.3975 0.520 0.76 0.00 0.00 0.24
#> Prog_089 3 0.7365 0.114 0.00 0.40 0.44 0.16
#> Prog_126 1 0.1637 0.806 0.94 0.00 0.00 0.06
#> Prog_166 1 0.2011 0.798 0.92 0.00 0.00 0.08
#> Prog_188 4 0.7653 0.542 0.24 0.00 0.30 0.46
#> Prog_207 3 0.0707 0.762 0.00 0.02 0.98 0.00
#> Prog_172 1 0.4855 0.032 0.60 0.00 0.00 0.40
#> Prog_242 2 0.0707 0.867 0.00 0.98 0.00 0.02
#> Prog_212 1 0.0000 0.813 1.00 0.00 0.00 0.00
#> Prog_250 1 0.4406 0.363 0.70 0.00 0.00 0.30
#> Prog_253 2 0.0000 0.873 0.00 1.00 0.00 0.00
#> Prog_284 3 0.0707 0.757 0.00 0.00 0.98 0.02
#> Prog_261 4 0.6248 0.253 0.10 0.00 0.26 0.64
#> Prog_285 1 0.0000 0.813 1.00 0.00 0.00 0.00
#> Prog_274 1 0.0000 0.813 1.00 0.00 0.00 0.00
#> Prog_281 2 0.5535 0.199 0.00 0.56 0.42 0.02
#> Prog_334 3 0.6074 0.389 0.00 0.34 0.60 0.06
#> Prog_298 2 0.0707 0.867 0.00 0.98 0.00 0.02
#> Prog_361 1 0.1211 0.811 0.96 0.00 0.00 0.04
#> Prog_350 1 0.1211 0.811 0.96 0.00 0.00 0.04
#> Prog_368 2 0.7699 -0.139 0.00 0.40 0.38 0.22
#> Prog_374 1 0.1211 0.811 0.96 0.00 0.00 0.04
#> Prog_351 3 0.2345 0.729 0.00 0.00 0.90 0.10
#> Prog_363 1 0.0000 0.813 1.00 0.00 0.00 0.00
#> Prog_346 1 0.2647 0.771 0.88 0.00 0.00 0.12
#> Prog_340 2 0.0000 0.873 0.00 1.00 0.00 0.00
#> Prog_366 2 0.4292 0.748 0.00 0.82 0.08 0.10
#> HSPC_389 1 0.1637 0.807 0.94 0.00 0.00 0.06
#> Prog_418 1 0.0000 0.813 1.00 0.00 0.00 0.00
#> Prog_425 3 0.1913 0.747 0.00 0.02 0.94 0.04
#> Prog_396 1 0.2345 0.785 0.90 0.00 0.00 0.10
#> Prog_408 1 0.0707 0.813 0.98 0.00 0.00 0.02
#> Prog_457 1 0.7869 -0.556 0.38 0.00 0.28 0.34
#> Prog_453 3 0.1913 0.751 0.00 0.02 0.94 0.04
#> LT-HSC_132 1 0.0000 0.813 1.00 0.00 0.00 0.00
#> Prog_543 2 0.1637 0.844 0.00 0.94 0.00 0.06
#> Prog_545 1 0.0000 0.813 1.00 0.00 0.00 0.00
#> Prog_528 2 0.0707 0.867 0.00 0.98 0.02 0.00
#> Prog_566 2 0.0000 0.873 0.00 1.00 0.00 0.00
#> Prog_576 1 0.3400 0.628 0.82 0.00 0.00 0.18
#> Prog_605 1 0.1211 0.811 0.96 0.00 0.00 0.04
#> Prog_637 1 0.4522 0.532 0.68 0.00 0.00 0.32
#> Prog_639 2 0.0000 0.873 0.00 1.00 0.00 0.00
#> Prog_709 1 0.5271 0.464 0.64 0.02 0.00 0.34
#> Prog_702 3 0.2345 0.726 0.00 0.00 0.90 0.10
#> Prog_708 1 0.2647 0.711 0.88 0.00 0.00 0.12
#> Prog_714 1 0.0000 0.813 1.00 0.00 0.00 0.00
#> Prog_720 1 0.1637 0.805 0.94 0.00 0.00 0.06
#> Prog_721 1 0.4134 0.636 0.74 0.00 0.00 0.26
#> Prog_734 2 0.0000 0.873 0.00 1.00 0.00 0.00
#> Prog_722 2 0.1637 0.844 0.00 0.94 0.00 0.06
#> Prog_770 2 0.0000 0.873 0.00 1.00 0.00 0.00
#> Prog_771 2 0.0707 0.866 0.00 0.98 0.02 0.00
#> Prog_783 4 0.6323 0.424 0.44 0.00 0.06 0.50
#> Prog_802 1 0.4522 0.310 0.68 0.00 0.00 0.32
#> Prog_811 3 0.0000 0.759 0.00 0.00 1.00 0.00
#> Prog_835 1 0.5713 0.176 0.62 0.00 0.04 0.34
#> Prog_818 2 0.0000 0.873 0.00 1.00 0.00 0.00
#> Prog_842 1 0.1211 0.811 0.96 0.00 0.00 0.04
#> Prog_831 1 0.4624 0.500 0.66 0.00 0.00 0.34
#> Prog_837 1 0.0707 0.803 0.98 0.00 0.00 0.02
#> Prog_807 1 0.2345 0.783 0.90 0.00 0.00 0.10
#> Prog_844 1 0.3400 0.715 0.82 0.00 0.00 0.18
#> Prog_850 3 0.1211 0.756 0.00 0.00 0.96 0.04
#> Prog_815 1 0.0000 0.813 1.00 0.00 0.00 0.00
Heatmaps for the consensus matrix. It visualizes the probability of two samples to be in a same group.
consensus_heatmap(res, k = 2)
consensus_heatmap(res, k = 3)
consensus_heatmap(res, k = 4)
Heatmaps for the membership of samples in all partitions to see how consistent they are:
membership_heatmap(res, k = 2)
membership_heatmap(res, k = 3)
membership_heatmap(res, k = 4)
As soon as the classes for columns are determined, the signatures that are significantly different between subgroups can be looked for. Following are the heatmaps for signatures.
Signature heatmaps where rows are scaled:
Signature heatmaps where rows are not scaled:
get_signatures(res, k = 2, scale_rows = FALSE)
get_signatures(res, k = 3, scale_rows = FALSE)
get_signatures(res, k = 4, scale_rows = FALSE)
Compare the overlap of signatures from different k:
compare_signatures(res)
get_signature() returns a data frame invisibly. To get the list of signatures, the function
call should be assigned to a variable explicitly. In following code, if plot argument is set
to FALSE, no heatmap is plotted while only the differential analysis is performed.
# code only for demonstration
tb = get_signature(res, k = ..., plot = FALSE)
An example of the output of tb is:
#> which_row fdr mean_1 mean_2 scaled_mean_1 scaled_mean_2 km
#> 1 38 0.042760348 8.373488 9.131774 -0.5533452 0.5164555 1
#> 2 40 0.018707592 7.106213 8.469186 -0.6173731 0.5762149 1
#> 3 55 0.019134737 10.221463 11.207825 -0.6159697 0.5749050 1
#> 4 59 0.006059896 5.921854 7.869574 -0.6899429 0.6439467 1
#> 5 60 0.018055526 8.928898 10.211722 -0.6204761 0.5791110 1
#> 6 98 0.009384629 15.714769 14.887706 0.6635654 -0.6193277 2
...
The columns in tb are:
which_row: row indices corresponding to the input matrix.fdr: FDR for the differential test. mean_x: The mean value in group x.scaled_mean_x: The mean value in group x after rows are scaled.km: Row groups if k-means clustering is applied to rows (which is done by automatically selecting number of clusters).If there are too many signatures, top_signatures = ... can be set to only show the
signatures with the highest FDRs:
# code only for demonstration
# e.g. to show the top 500 most significant rows
tb = get_signature(res, k = ..., top_signatures = 500)
If the signatures are defined as these which are uniquely high in current group, diff_method argument
can be set to "uniquely_high_in_one_group":
# code only for demonstration
tb = get_signature(res, k = ..., diff_method = "uniquely_high_in_one_group")
UMAP plot which shows how samples are separated.
dimension_reduction(res, k = 2, method = "UMAP")
dimension_reduction(res, k = 3, method = "UMAP")
dimension_reduction(res, k = 4, method = "UMAP")
Following heatmap shows how subgroups are split when increasing k:
collect_classes(res)
If matrix rows can be associated to genes, consider to use functional_enrichment(res,
...) to perform function enrichment for the signature genes. See this vignette for more detailed explanations.
Parent node: Node0. Child nodes: Node011 , Node012 , Node013 , Node014 , Node021 , Node022-leaf , Node023-leaf , Node031 , Node032 , Node033 , Node041 , Node042 , Node043-leaf .
The object with results only for a single top-value method and a single partitioning method can be extracted as:
res = res_rh["02"]
A summary of res and all the functions that can be applied to it:
res
#> A 'DownSamplingConsensusPartition' object with k = 2, 3, 4.
#> On a matrix with 22269 rows and 500 columns, randomly sampled from 584 columns.
#> Top rows (2030) are extracted by 'ATC' method.
#> Subgroups are detected by 'skmeans' method.
#> Performed in total 150 partitions by row resampling.
#> Best k for subgroups seems to be 4.
#>
#> Following methods can be applied to this 'DownSamplingConsensusPartition' object:
#> [1] "cola_report" "collect_classes" "collect_plots"
#> [4] "collect_stats" "colnames" "compare_partitions"
#> [7] "compare_signatures" "consensus_heatmap" "dimension_reduction"
#> [10] "functional_enrichment" "get_anno_col" "get_anno"
#> [13] "get_classes" "get_consensus" "get_matrix"
#> [16] "get_membership" "get_param" "get_signatures"
#> [19] "get_stats" "is_best_k" "is_stable_k"
#> [22] "membership_heatmap" "ncol" "nrow"
#> [25] "plot_ecdf" "predict_classes" "rownames"
#> [28] "select_partition_number" "show" "suggest_best_k"
#> [31] "test_to_known_factors" "top_rows_heatmap"
collect_plots() function collects all the plots made from res for all k (number of subgroups)
into one single page to provide an easy and fast comparison between different k.
collect_plots(res)
The plots are:
k and the heatmap of
predicted classes for each k.k.k.k.All the plots in panels can be made by individual functions and they are plotted later in this section.
select_partition_number() produces several plots showing different
statistics for choosing “optimized” k. There are following statistics:
k;k, the area increased is defined as \(A_k - A_{k-1}\).The detailed explanations of these statistics can be found in the cola vignette.
Generally speaking, higher 1-PAC score, higher mean silhouette score or higher
concordance corresponds to better partition. Rand index and Jaccard index
measure how similar the current partition is compared to partition with k-1.
If they are too similar, we won't accept k is better than k-1.
select_partition_number(res)
The numeric values for all these statistics can be obtained by get_stats().
get_stats(res)
#> k 1-PAC mean_silhouette concordance area_increased Rand Jaccard
#> 2 2 1.000 0.995 0.998 0.4765 0.523 0.523
#> 3 3 0.977 0.951 0.978 0.2332 0.881 0.774
#> 4 4 0.923 0.923 0.969 0.0377 0.940 0.859
suggest_best_k() suggests the best \(k\) based on these statistics. The rules are as follows:
suggest_best_k(res)
#> [1] 4
#> attr(,"optional")
#> [1] 2 3
There is also optional best \(k\) = 2 3 that is worth to check.
Following is the table of the partitions (You need to click the show/hide
code output link to see it). The membership matrix (columns with name p*)
is inferred by
clue::cl_consensus()
function with the SE method. Basically the value in the membership matrix
represents the probability to belong to a certain group. The finall subgroup
label for an item is determined with the group with highest probability it
belongs to.
In get_classes() function, the entropy is calculated from the membership
matrix and the silhouette score is calculated from the consensus matrix.
get_classes(res, k = 2)
#> class p
#> HSPC_007 1 0.000
#> HSPC_013 2 0.000
#> HSPC_019 1 0.000
#> LT-HSC_001 2 0.751
#> HSPC_014 2 0.249
#> HSPC_032 1 0.000
#> HSPC_038 2 0.000
#> HSPC_002 2 0.000
#> HSPC_009 2 0.000
#> HSPC_015 2 0.000
#> HSPC_021 2 1.000
#> HSPC_039 1 0.000
#> LT-HSC_003 2 0.498
#> HSPC_010 1 0.000
#> LT-HSC_004 2 0.000
#> HSPC_017 2 0.000
#> HSPC_029 1 0.000
#> HSPC_035 2 0.000
#> LT-HSC_005 1 0.000
#> HSPC_005 1 0.000
#> HSPC_024 2 0.000
#> LT-HSC_006 2 0.000
#> LT-HSC_009 2 0.000
#> Prog_034 1 0.000
#> Prog_041 1 0.000
#> LT-HSC_011 1 0.000
#> Prog_005 1 0.000
#> Prog_012 2 0.000
#> Prog_018 2 1.000
#> HSPC_073 2 0.000
#> LT-HSC_013 2 0.000
#> HSPC_056 2 1.000
#> HSPC_068 2 0.751
#> HSPC_074 2 0.751
#> LT-HSC_014 2 0.000
#> HSPC_057 2 0.000
#> HSPC_075 2 0.000
#> LT-HSC_015 2 0.000
#> LT-HSC_016 2 0.000
#> HSPC_059 1 0.000
#> HSPC_083 2 0.000
#> LT-HSC_017 2 0.000
#> HSPC_047 2 0.000
#> LT-HSC_018 2 0.000
#> LT-HSC_019 1 0.000
#> LT-HSC_022 2 0.000
#> LT-HSC_023 2 0.000
#> Prog_060 1 0.000
#> HSPC_091 1 0.000
#> HSPC_097 2 0.000
#> HSPC_103 2 0.000
#> HSPC_115 2 0.000
#> HSPC_121 2 0.000
#> LT-HSC_025 1 0.000
#> HSPC_092 1 1.000
#> HSPC_104 2 0.000
#> HSPC_116 1 0.000
#> LT-HSC_026 2 0.498
#> HSPC_086 1 0.000
#> HSPC_093 1 0.000
#> HSPC_105 2 0.000
#> HSPC_111 2 0.000
#> HSPC_123 2 0.498
#> LT-HSC_027 2 1.000
#> HSPC_087 2 0.000
#> HSPC_106 2 0.253
#> HSPC_112 1 0.000
#> HSPC_124 1 0.000
#> HSPC_095 2 0.000
#> HSPC_113 1 0.000
#> HSPC_119 2 0.253
#> LT-HSC_029 1 0.000
#> LT-HSC_030 1 0.000
#> Prog_121 1 0.000
#> Prog_104 1 0.000
#> Prog_086 1 0.000
#> LT-HSC_035 1 0.000
#> Prog_120 2 0.249
#> HSPC_133 2 1.000
#> HSPC_139 2 0.000
#> HSPC_145 2 0.249
#> HSPC_163 1 0.747
#> LT-HSC_037 2 0.747
#> HSPC_134 2 0.751
#> HSPC_140 2 1.000
#> HSPC_152 2 0.000
#> HSPC_164 2 0.000
#> LT-HSC_038 2 0.000
#> HSPC_128 2 0.000
#> HSPC_141 2 0.000
#> HSPC_147 2 0.253
#> HSPC_153 2 0.000
#> LT-HSC_039 2 1.000
#> HSPC_129 1 0.000
#> HSPC_160 1 0.000
#> LT-HSC_040 2 1.000
#> HSPC_137 1 0.000
#> HSPC_143 2 1.000
#> HSPC_149 2 1.000
#> HSPC_155 2 0.249
#> HSPC_167 2 0.249
#> LT-HSC_041 2 0.502
#> HSPC_131 2 0.249
#> HSPC_150 1 0.000
#> LT-HSC_042 2 0.000
#> Prog_164 1 0.000
#> Prog_147 1 0.000
#> Prog_148 2 0.000
#> Prog_160 2 0.000
#> LT-HSC_047 1 0.000
#> Prog_138 1 0.000
#> Prog_156 1 1.000
#> LT-HSC_048 2 0.000
#> HSPC_181 2 0.751
#> HSPC_187 2 1.000
#> HSPC_205 2 1.000
#> LT-HSC_049 2 0.249
#> HSPC_176 2 0.000
#> HSPC_182 2 0.498
#> HSPC_188 1 0.000
#> HSPC_194 1 0.000
#> HSPC_200 2 0.000
#> LT-HSC_050 2 0.502
#> HSPC_170 2 0.000
#> HSPC_177 2 0.000
#> HSPC_201 1 0.000
#> LT-HSC_051 2 0.000
#> HSPC_171 2 0.000
#> HSPC_184 1 0.000
#> HSPC_208 2 0.249
#> HSPC_185 2 0.253
#> HSPC_191 2 0.000
#> HSPC_197 1 0.000
#> HSPC_209 1 0.000
#> LT-HSC_053 1 0.000
#> HSPC_173 2 0.000
#> HSPC_192 2 0.000
#> LT-HSC_054 2 0.253
#> Prog_181 1 0.000
#> Prog_169 1 0.000
#> Prog_194 2 0.249
#> Prog_202 1 0.000
#> LT-HSC_059 1 0.000
#> Prog_198 1 0.000
#> Prog_204 2 1.000
#> Prog_174 1 0.000
#> HSPC_217 1 0.000
#> HSPC_223 2 1.000
#> HSPC_229 2 0.000
#> HSPC_235 2 0.000
#> HSPC_241 1 0.000
#> HSPC_247 2 0.000
#> LT-HSC_061 1 0.000
#> HSPC_218 2 0.253
#> HSPC_224 2 0.249
#> HSPC_242 1 0.000
#> HSPC_248 2 0.502
#> LT-HSC_062 2 0.000
#> HSPC_212 2 0.249
#> HSPC_225 2 1.000
#> HSPC_231 2 1.000
#> HSPC_237 2 1.000
#> HSPC_249 2 0.000
#> HSPC_220 2 1.000
#> HSPC_226 1 0.000
#> HSPC_232 2 1.000
#> HSPC_238 1 0.000
#> HSPC_227 2 0.249
#> HSPC_239 2 1.000
#> HSPC_245 2 0.000
#> HSPC_228 2 0.249
#> HSPC_234 1 0.000
#> HSPC_246 2 0.000
#> HSPC_252 1 0.000
#> Prog_235 2 0.249
#> Prog_241 2 0.000
#> LT-HSC_067 1 0.000
#> Prog_219 1 0.000
#> Prog_220 1 0.000
#> Prog_251 1 0.000
#> HSPC_259 2 0.000
#> HSPC_265 2 0.253
#> HSPC_277 2 0.502
#> HSPC_283 2 0.502
#> HSPC_289 2 0.249
#> LT-HSC_073 2 0.249
#> HSPC_260 1 0.000
#> HSPC_266 2 1.000
#> HSPC_272 1 0.000
#> HSPC_284 1 0.000
#> LT-HSC_074 2 0.000
#> HSPC_254 2 0.000
#> HSPC_273 1 0.000
#> HSPC_262 1 0.000
#> HSPC_274 2 0.000
#> HSPC_281 2 0.249
#> LT-HSC_077 2 0.000
#> HSPC_264 2 0.000
#> LT-HSC_078 2 0.000
#> LT-HSC_079 1 0.000
#> LT-HSC_083 1 0.000
#> Prog_257 1 0.000
#> Prog_264 2 0.249
#> HSPC_301 2 0.249
#> HSPC_307 2 1.000
#> HSPC_319 1 0.000
#> HSPC_325 2 0.249
#> HSPC_331 2 0.000
#> LT-HSC_085 2 0.000
#> HSPC_302 2 1.000
#> HSPC_326 2 0.000
#> HSPC_296 2 1.000
#> HSPC_309 2 0.000
#> HSPC_315 2 1.000
#> LT-HSC_087 1 0.000
#> HSPC_297 2 1.000
#> HSPC_310 2 0.751
#> HSPC_316 2 0.000
#> HSPC_334 2 0.000
#> HSPC_311 1 0.000
#> HSPC_317 2 0.000
#> HSPC_335 2 0.000
#> LT-HSC_089 2 0.498
#> HSPC_318 2 0.000
#> HSPC_336 2 0.249
#> Prog_302 1 0.000
#> LT-HSC_092 1 0.000
#> Prog_303 2 1.000
#> Prog_309 2 0.000
#> Prog_317 1 0.000
#> Prog_306 2 0.751
#> HSPC_355 1 0.000
#> HSPC_361 2 0.000
#> HSPC_367 2 0.000
#> HSPC_373 2 0.000
#> LT-HSC_097 1 1.000
#> HSPC_337 2 0.498
#> HSPC_350 2 0.000
#> HSPC_357 1 0.000
#> HSPC_363 2 0.000
#> HSPC_369 1 0.000
#> HSPC_375 1 0.000
#> LT-HSC_099 2 0.000
#> HSPC_340 1 0.000
#> HSPC_347 1 0.000
#> HSPC_365 2 1.000
#> HSPC_354 2 0.000
#> HSPC_366 1 0.000
#> HSPC_378 1 0.000
#> Prog_344 1 0.000
#> LT-HSC_104 1 1.000
#> Prog_347 1 0.000
#> Prog_365 1 0.000
#> LT-HSC_107 2 0.000
#> Prog_348 1 0.000
#> HSPC_385 1 0.000
#> HSPC_397 1 0.000
#> HSPC_409 2 0.249
#> HSPC_415 1 0.751
#> HSPC_379 1 1.000
#> HSPC_381 1 0.000
#> HSPC_394 1 0.000
#> HSPC_401 1 0.000
#> HSPC_383 2 0.000
#> HSPC_414 1 0.000
#> HSPC_384 1 0.000
#> Prog_391 1 0.000
#> Prog_400 1 0.000
#> HSPC_433 1 0.000
#> HSPC_439 1 1.000
#> HSPC_445 1 0.000
#> HSPC_451 2 0.000
#> HSPC_457 2 0.000
#> LT-HSC_109 2 0.000
#> HSPC_427 2 1.000
#> HSPC_434 1 0.000
#> HSPC_446 2 0.000
#> HSPC_452 1 0.000
#> HSPC_458 1 0.000
#> HSPC_464 1 0.000
#> HSPC_428 1 1.000
#> LT-HSC_111 2 0.000
#> HSPC_429 1 0.000
#> HSPC_437 1 0.000
#> HSPC_455 2 0.249
#> HSPC_438 1 0.000
#> HSPC_444 2 0.000
#> HSPC_450 2 0.000
#> LT-HSC_114 2 0.000
#> HSPC_432 2 0.000
#> Prog_427 2 0.000
#> Prog_452 1 0.000
#> Prog_442 1 0.000
#> LT-HSC_118 1 0.249
#> Prog_461 2 0.000
#> LT-HSC_119 1 0.000
#> Prog_438 2 0.498
#> HSPC_475 2 0.000
#> HSPC_481 2 0.000
#> HSPC_487 1 0.498
#> HSPC_493 2 0.000
#> HSPC_499 2 0.000
#> LT-HSC_121 1 0.000
#> HSPC_469 2 0.000
#> HSPC_476 1 0.000
#> HSPC_482 2 1.000
#> HSPC_488 2 0.000
#> HSPC_494 2 0.000
#> HSPC_500 2 0.498
#> HSPC_506 2 0.502
#> HSPC_470 2 0.000
#> HSPC_483 2 0.000
#> HSPC_501 2 1.000
#> HSPC_507 2 0.000
#> LT-HSC_123 2 0.000
#> HSPC_471 2 0.000
#> HSPC_478 2 0.000
#> HSPC_484 1 0.000
#> HSPC_497 2 0.000
#> HSPC_504 2 0.000
#> LT-HSC_127 1 0.000
#> LT-HSC_129 1 0.000
#> Prog_480 2 0.000
#> Prog_498 1 0.000
#> HSPC_517 2 0.000
#> HSPC_529 1 0.000
#> HSPC_535 2 1.000
#> HSPC_541 2 0.000
#> LT-HSC_133 1 0.502
#> HSPC_511 2 0.000
#> HSPC_518 2 0.000
#> HSPC_524 2 0.000
#> HSPC_530 2 0.000
#> HSPC_536 1 0.000
#> HSPC_542 1 0.000
#> HSPC_548 2 0.000
#> LT-HSC_134 2 0.498
#> HSPC_519 1 0.000
#> HSPC_525 2 0.751
#> HSPC_531 2 0.000
#> HSPC_549 2 0.000
#> LT-HSC_135 2 0.000
#> HSPC_513 1 1.000
#> LT-HSC_136 2 0.000
#> HSPC_521 2 0.000
#> HSPC_539 2 0.253
#> HSPC_545 2 0.000
#> LT-HSC_137 2 0.000
#> HSPC_522 2 1.000
#> HSPC_546 2 0.000
#> LT-HSC_138 2 0.000
#> LT-HSC_140 2 0.502
#> Prog_537 2 0.000
#> LT-HSC_141 1 1.000
#> Prog_526 2 0.502
#> Prog_532 2 0.000
#> Prog_538 1 1.000
#> Prog_544 2 0.498
#> Prog_533 2 0.000
#> Prog_522 2 0.498
#> Prog_540 2 0.000
#> Prog_546 2 1.000
#> HSPC_559 2 0.000
#> HSPC_565 2 0.000
#> HSPC_577 2 0.253
#> HSPC_583 1 0.000
#> HSPC_589 2 0.000
#> LT-HSC_145 2 0.000
#> HSPC_560 2 0.000
#> HSPC_566 2 0.000
#> HSPC_572 2 0.000
#> HSPC_578 2 0.000
#> HSPC_584 2 0.000
#> HSPC_554 2 0.000
#> HSPC_561 1 0.000
#> HSPC_573 2 0.000
#> HSPC_585 2 0.000
#> HSPC_591 1 1.000
#> LT-HSC_147 2 0.000
#> HSPC_555 2 0.000
#> HSPC_562 2 0.249
#> HSPC_568 2 0.000
#> HSPC_581 1 0.000
#> HSPC_587 1 0.000
#> HSPC_593 2 0.498
#> LT-HSC_149 2 0.502
#> HSPC_564 1 0.000
#> HSPC_570 1 0.000
#> HSPC_576 2 0.000
#> HSPC_582 2 0.000
#> HSPC_588 1 0.000
#> HSPC_594 2 0.000
#> LT-HSC_150 2 0.000
#> HSPC_558 1 0.000
#> Prog_583 2 0.498
#> Prog_589 2 0.000
#> LT-HSC_152 2 0.000
#> Prog_573 2 0.000
#> Prog_591 2 0.000
#> LT-HSC_153 2 0.000
#> LT-HSC_154 1 0.000
#> Prog_563 1 0.000
#> LT-HSC_155 1 0.000
#> HSPC_607 2 0.000
#> HSPC_619 1 0.000
#> HSPC_625 2 0.000
#> LT-HSC_157 2 0.000
#> HSPC_602 2 0.000
#> HSPC_608 2 0.000
#> HSPC_620 2 0.000
#> HSPC_626 2 0.000
#> HSPC_632 1 0.000
#> LT-HSC_158 2 0.000
#> HSPC_609 2 0.000
#> HSPC_615 2 0.502
#> HSPC_621 1 0.000
#> HSPC_633 2 0.000
#> HSPC_604 2 0.000
#> HSPC_610 2 0.000
#> HSPC_616 1 0.000
#> HSPC_622 1 0.000
#> LT-HSC_160 2 0.000
#> HSPC_605 1 0.000
#> HSPC_611 1 0.000
#> LT-HSC_161 2 0.000
#> HSPC_599 2 0.000
#> HSPC_618 2 0.000
#> HSPC_630 2 0.751
#> LT-HSC_162 1 1.000
#> HSPC_600 2 0.000
#> Prog_601 1 0.000
#> Prog_619 2 0.249
#> LT-HSC_163 2 0.000
#> Prog_595 2 0.000
#> LT-HSC_165 2 0.000
#> LT-HSC_167 2 0.000
#> Prog_636 1 0.000
#> HSPC_655 1 0.000
#> HSPC_667 2 0.000
#> HSPC_673 2 0.000
#> LT-HSC_169 2 0.000
#> HSPC_650 1 0.000
#> HSPC_656 2 0.000
#> HSPC_662 2 0.000
#> HSPC_657 1 1.000
#> HSPC_669 2 0.000
#> HSPC_675 1 0.502
#> HSPC_670 2 0.751
#> HSPC_676 2 0.000
#> LT-HSC_172 2 0.000
#> HSPC_647 2 0.000
#> HSPC_653 1 0.000
#> HSPC_659 1 0.000
#> HSPC_677 2 0.498
#> LT-HSC_173 2 0.000
#> HSPC_648 2 0.000
#> HSPC_678 2 0.000
#> HSPC_642 1 0.000
#> LT-HSC_175 1 0.000
#> Prog_668 2 0.502
#> LT-HSC_176 2 0.000
#> Prog_669 2 0.000
#> LT-HSC_177 2 0.000
#> Prog_664 2 0.249
#> LT-HSC_178 1 0.000
#> Prog_641 2 0.000
#> HSPC_685 1 0.000
#> HSPC_691 1 0.000
#> HSPC_703 2 0.000
#> HSPC_709 2 1.000
#> HSPC_715 1 0.000
#> LT-HSC_181 1 1.000
#> HSPC_686 1 0.000
#> HSPC_692 2 0.000
#> HSPC_698 2 0.751
#> HSPC_704 2 0.000
#> HSPC_710 1 0.000
#> HSPC_716 2 0.000
#> LT-HSC_182 1 0.000
#> HSPC_680 2 0.000
#> HSPC_687 2 0.000
#> HSPC_693 2 0.498
#> HSPC_699 2 1.000
#> HSPC_711 1 0.000
#> HSPC_688 1 0.000
#> HSPC_694 1 0.000
#> HSPC_712 1 0.000
#> HSPC_718 1 0.000
#> HSPC_689 2 0.000
#> HSPC_713 1 0.000
#> HSPC_719 2 0.000
#> LT-HSC_185 2 0.498
#> HSPC_690 2 1.000
#> HSPC_702 2 0.000
#> HSPC_714 2 0.000
#> LT-HSC_186 1 0.000
#> HSPC_684 2 0.000
#> Prog_691 1 0.000
#> LT-HSC_189 1 0.000
#> LT-HSC_190 1 0.751
#> Prog_683 2 0.249
#> HSPC_727 2 0.000
#> HSPC_733 2 0.000
#> HSPC_739 2 0.498
#> HSPC_745 2 0.000
#> HSPC_751 2 0.000
#> HSPC_757 2 0.000
#> LT-HSC_193 2 0.249
#> HSPC_721 2 0.000
#> HSPC_728 1 0.000
#> HSPC_740 2 0.000
#> HSPC_746 2 0.751
#> HSPC_752 2 0.000
#> LT-HSC_194 2 0.249
#> HSPC_741 1 0.000
#> HSPC_747 2 1.000
#> HSPC_748 2 0.000
#> HSPC_754 1 0.000
#> LT-HSC_196 1 0.000
#> HSPC_749 2 0.000
#> LT-HSC_197 2 0.000
#> HSPC_725 2 0.000
#> HSPC_738 2 0.000
#> HSPC_756 2 0.000
#> LT-HSC_198 2 0.502
#> HSPC_726 1 0.000
#> LT-HSC_199 1 0.000
#> LT-HSC_200 2 0.000
#> Prog_729 2 0.498
#> Prog_741 1 0.000
#> LT-HSC_201 2 0.000
#> Prog_742 1 0.000
#> Prog_755 1 0.000
#> LT-HSC_203 1 0.000
#> HSPC_769 2 0.253
#> HSPC_775 2 0.000
#> HSPC_781 2 0.000
#> HSPC_787 2 0.000
#> HSPC_793 1 0.751
#> HSPC_799 2 0.000
#> LT-HSC_205 2 0.000
#> HSPC_763 1 1.000
#> HSPC_776 2 0.000
#> HSPC_782 2 0.000
#> HSPC_788 2 0.253
#> LT-HSC_206 2 0.000
#> HSPC_764 2 0.000
#> HSPC_783 2 0.000
#> HSPC_765 2 0.000
#> HSPC_802 2 0.249
#> LT-HSC_208 2 0.751
#> HSPC_803 2 1.000
#> LT-HSC_209 1 0.000
#> HSPC_792 1 0.000
#> HSPC_798 2 0.249
#> HSPC_804 2 0.751
#> LT-HSC_210 2 0.000
#> HSPC_768 2 0.000
#> LT-HSC_213 2 0.000
#> Prog_778 2 0.751
#> Prog_766 1 0.751
#> Prog_773 1 0.000
#> HSPC_811 1 1.000
#> HSPC_817 1 0.000
#> HSPC_823 1 1.000
#> HSPC_829 1 0.000
#> HSPC_847 2 0.253
#> HSPC_805 1 0.249
#> HSPC_830 1 1.000
#> HSPC_836 2 0.000
#> HSPC_842 2 0.000
#> HSPC_848 2 0.000
#> HSPC_806 2 0.000
#> HSPC_849 2 0.253
#> HSPC_844 2 0.000
#> HSPC_850 1 0.000
#> HSPC_827 2 0.000
#> HSPC_851 2 0.000
#> HSPC_809 2 0.498
#> HSPC_840 2 0.751
#> HSPC_852 2 0.751
#> HSPC_810 2 1.000
#> Prog_812 2 1.000
#> Prog_848 2 0.000
get_classes(res, k = 3)
#> class p
#> HSPC_007 1 0.000
#> HSPC_013 3 0.000
#> HSPC_019 1 0.000
#> LT-HSC_001 3 1.000
#> HSPC_014 2 0.000
#> HSPC_032 1 0.000
#> HSPC_038 2 0.000
#> HSPC_002 2 1.000
#> HSPC_009 2 0.000
#> HSPC_015 3 1.000
#> HSPC_021 2 0.249
#> HSPC_039 1 0.000
#> LT-HSC_003 3 1.000
#> HSPC_010 1 0.000
#> LT-HSC_004 2 1.000
#> HSPC_017 2 0.000
#> HSPC_029 1 0.000
#> HSPC_035 2 1.000
#> LT-HSC_005 1 0.000
#> HSPC_005 1 0.000
#> HSPC_024 2 0.000
#> LT-HSC_006 2 0.751
#> LT-HSC_009 2 0.249
#> Prog_034 1 0.000
#> Prog_041 1 0.000
#> LT-HSC_011 1 0.000
#> Prog_005 1 0.000
#> Prog_012 2 0.000
#> Prog_018 2 0.000
#> HSPC_073 2 0.000
#> LT-HSC_013 2 0.249
#> HSPC_056 2 0.000
#> HSPC_068 2 1.000
#> HSPC_074 2 0.000
#> LT-HSC_014 2 0.000
#> HSPC_057 2 0.249
#> HSPC_075 2 0.502
#> LT-HSC_015 2 0.000
#> LT-HSC_016 2 0.000
#> HSPC_059 1 0.000
#> HSPC_083 2 0.000
#> LT-HSC_017 2 0.000
#> HSPC_047 3 0.000
#> LT-HSC_018 2 0.000
#> LT-HSC_019 1 0.000
#> LT-HSC_022 2 0.000
#> LT-HSC_023 2 0.000
#> Prog_060 1 0.000
#> HSPC_091 1 1.000
#> HSPC_097 3 0.000
#> HSPC_103 2 0.000
#> HSPC_115 2 0.000
#> HSPC_121 3 1.000
#> LT-HSC_025 1 1.000
#> HSPC_092 1 1.000
#> HSPC_104 3 1.000
#> HSPC_116 1 0.000
#> LT-HSC_026 2 1.000
#> HSPC_086 1 0.000
#> HSPC_093 1 0.000
#> HSPC_105 2 0.253
#> HSPC_111 2 0.000
#> HSPC_123 2 0.747
#> LT-HSC_027 3 1.000
#> HSPC_087 2 0.000
#> HSPC_106 2 1.000
#> HSPC_112 1 0.000
#> HSPC_124 1 0.000
#> HSPC_095 2 0.498
#> HSPC_113 3 0.000
#> HSPC_119 3 1.000
#> LT-HSC_029 1 0.000
#> LT-HSC_030 1 0.000
#> Prog_121 1 0.000
#> Prog_104 1 0.000
#> Prog_086 1 0.000
#> LT-HSC_035 1 0.498
#> Prog_120 3 0.000
#> HSPC_133 2 1.000
#> HSPC_139 2 0.000
#> HSPC_145 3 0.498
#> HSPC_163 3 0.000
#> LT-HSC_037 3 1.000
#> HSPC_134 3 0.502
#> HSPC_140 3 0.000
#> HSPC_152 2 0.000
#> HSPC_164 2 0.000
#> LT-HSC_038 3 1.000
#> HSPC_128 3 0.000
#> HSPC_141 2 1.000
#> HSPC_147 3 1.000
#> HSPC_153 2 0.751
#> LT-HSC_039 2 1.000
#> HSPC_129 1 0.000
#> HSPC_160 1 0.000
#> LT-HSC_040 2 1.000
#> HSPC_137 1 0.000
#> HSPC_143 2 1.000
#> HSPC_149 2 0.000
#> HSPC_155 3 1.000
#> HSPC_167 3 1.000
#> LT-HSC_041 2 0.000
#> HSPC_131 2 1.000
#> HSPC_150 1 0.000
#> LT-HSC_042 2 1.000
#> Prog_164 1 0.000
#> Prog_147 1 0.000
#> Prog_148 3 0.000
#> Prog_160 2 1.000
#> LT-HSC_047 1 0.000
#> Prog_138 1 0.000
#> Prog_156 1 1.000
#> LT-HSC_048 3 0.502
#> HSPC_181 2 0.000
#> HSPC_187 2 0.000
#> HSPC_205 2 1.000
#> LT-HSC_049 2 1.000
#> HSPC_176 2 0.000
#> HSPC_182 3 1.000
#> HSPC_188 1 0.000
#> HSPC_194 1 0.000
#> HSPC_200 2 0.000
#> LT-HSC_050 2 0.000
#> HSPC_170 3 0.751
#> HSPC_177 2 0.249
#> HSPC_201 1 0.000
#> LT-HSC_051 2 0.000
#> HSPC_171 2 0.000
#> HSPC_184 1 0.000
#> HSPC_208 2 0.751
#> HSPC_185 3 1.000
#> HSPC_191 2 0.000
#> HSPC_197 1 0.000
#> HSPC_209 1 0.000
#> LT-HSC_053 1 0.000
#> HSPC_173 3 0.000
#> HSPC_192 2 1.000
#> LT-HSC_054 2 0.000
#> Prog_181 1 0.000
#> Prog_169 1 0.000
#> Prog_194 3 0.000
#> Prog_202 1 0.000
#> LT-HSC_059 1 0.000
#> Prog_198 1 0.000
#> Prog_204 3 0.000
#> Prog_174 1 0.000
#> HSPC_217 1 0.000
#> HSPC_223 2 0.000
#> HSPC_229 3 0.000
#> HSPC_235 2 0.747
#> HSPC_241 1 0.000
#> HSPC_247 3 0.000
#> LT-HSC_061 1 0.000
#> HSPC_218 2 1.000
#> HSPC_224 2 0.000
#> HSPC_242 3 1.000
#> HSPC_248 2 0.000
#> LT-HSC_062 3 1.000
#> HSPC_212 3 1.000
#> HSPC_225 2 0.000
#> HSPC_231 3 0.000
#> HSPC_237 2 0.502
#> HSPC_249 2 0.249
#> HSPC_220 2 0.000
#> HSPC_226 1 0.000
#> HSPC_232 3 0.249
#> HSPC_238 1 0.000
#> HSPC_227 2 0.000
#> HSPC_239 2 1.000
#> HSPC_245 2 0.249
#> HSPC_228 3 0.000
#> HSPC_234 1 0.000
#> HSPC_246 2 0.000
#> HSPC_252 1 0.000
#> Prog_235 3 0.000
#> Prog_241 2 0.000
#> LT-HSC_067 1 0.000
#> Prog_219 1 0.000
#> Prog_220 1 0.000
#> Prog_251 1 0.000
#> HSPC_259 3 0.000
#> HSPC_265 2 0.000
#> HSPC_277 3 1.000
#> HSPC_283 2 0.751
#> HSPC_289 2 1.000
#> LT-HSC_073 3 1.000
#> HSPC_260 1 0.000
#> HSPC_266 2 1.000
#> HSPC_272 1 0.000
#> HSPC_284 1 0.000
#> LT-HSC_074 2 0.000
#> HSPC_254 2 1.000
#> HSPC_273 1 0.000
#> HSPC_262 1 0.000
#> HSPC_274 2 0.000
#> HSPC_281 3 0.000
#> LT-HSC_077 3 1.000
#> HSPC_264 2 0.249
#> LT-HSC_078 2 0.000
#> LT-HSC_079 1 0.000
#> LT-HSC_083 1 0.000
#> Prog_257 1 0.000
#> Prog_264 3 0.000
#> HSPC_301 3 0.000
#> HSPC_307 2 0.000
#> HSPC_319 1 0.000
#> HSPC_325 2 0.000
#> HSPC_331 2 0.000
#> LT-HSC_085 2 0.000
#> HSPC_302 3 0.498
#> HSPC_326 2 0.000
#> HSPC_296 2 0.000
#> HSPC_309 2 0.000
#> HSPC_315 2 0.000
#> LT-HSC_087 1 0.000
#> HSPC_297 2 0.000
#> HSPC_310 2 0.000
#> HSPC_316 3 1.000
#> HSPC_334 2 0.000
#> HSPC_311 1 0.000
#> HSPC_317 3 1.000
#> HSPC_335 2 0.000
#> LT-HSC_089 2 0.000
#> HSPC_318 2 0.000
#> HSPC_336 2 1.000
#> Prog_302 1 0.498
#> LT-HSC_092 1 0.000
#> Prog_303 2 1.000
#> Prog_309 2 0.498
#> Prog_317 1 0.000
#> Prog_306 2 0.000
#> HSPC_355 1 0.747
#> HSPC_361 3 0.000
#> HSPC_367 2 0.498
#> HSPC_373 3 1.000
#> LT-HSC_097 1 1.000
#> HSPC_337 2 0.000
#> HSPC_350 2 0.000
#> HSPC_357 1 0.000
#> HSPC_363 2 1.000
#> HSPC_369 1 0.000
#> HSPC_375 1 0.000
#> LT-HSC_099 3 0.000
#> HSPC_340 1 0.000
#> HSPC_347 1 0.000
#> HSPC_365 3 1.000
#> HSPC_354 2 0.000
#> HSPC_366 1 0.000
#> HSPC_378 1 0.000
#> Prog_344 1 0.000
#> LT-HSC_104 1 1.000
#> Prog_347 1 0.000
#> Prog_365 1 0.000
#> LT-HSC_107 3 0.000
#> Prog_348 1 0.000
#> HSPC_385 1 0.000
#> HSPC_397 1 0.000
#> HSPC_409 3 0.000
#> HSPC_415 3 1.000
#> HSPC_379 1 1.000
#> HSPC_381 1 0.000
#> HSPC_394 1 0.000
#> HSPC_401 1 0.000
#> HSPC_383 2 1.000
#> HSPC_414 1 0.000
#> HSPC_384 1 0.000
#> Prog_391 1 0.000
#> Prog_400 1 0.000
#> HSPC_433 1 0.000
#> HSPC_439 1 1.000
#> HSPC_445 1 0.000
#> HSPC_451 3 0.000
#> HSPC_457 2 0.751
#> LT-HSC_109 2 0.751
#> HSPC_427 3 0.000
#> HSPC_434 1 0.000
#> HSPC_446 2 1.000
#> HSPC_452 1 0.000
#> HSPC_458 1 0.000
#> HSPC_464 1 0.000
#> HSPC_428 1 1.000
#> LT-HSC_111 2 0.751
#> HSPC_429 1 0.000
#> HSPC_437 1 0.000
#> HSPC_455 2 0.000
#> HSPC_438 1 0.000
#> HSPC_444 2 0.751
#> HSPC_450 2 0.000
#> LT-HSC_114 3 1.000
#> HSPC_432 2 1.000
#> Prog_427 2 0.000
#> Prog_452 1 1.000
#> Prog_442 1 0.000
#> LT-HSC_118 1 1.000
#> Prog_461 2 0.751
#> LT-HSC_119 1 0.000
#> Prog_438 2 0.000
#> HSPC_475 2 0.000
#> HSPC_481 3 0.000
#> HSPC_487 1 1.000
#> HSPC_493 2 0.000
#> HSPC_499 2 0.253
#> LT-HSC_121 1 0.000
#> HSPC_469 3 0.000
#> HSPC_476 1 0.000
#> HSPC_482 2 1.000
#> HSPC_488 2 0.751
#> HSPC_494 2 1.000
#> HSPC_500 2 0.000
#> HSPC_506 2 1.000
#> HSPC_470 2 0.498
#> HSPC_483 2 1.000
#> HSPC_501 3 0.000
#> HSPC_507 2 0.249
#> LT-HSC_123 2 0.000
#> HSPC_471 2 1.000
#> HSPC_478 2 0.000
#> HSPC_484 1 0.000
#> HSPC_497 2 1.000
#> HSPC_504 2 0.253
#> LT-HSC_127 1 0.249
#> LT-HSC_129 1 0.000
#> Prog_480 3 0.000
#> Prog_498 1 0.000
#> HSPC_517 3 0.498
#> HSPC_529 1 0.000
#> HSPC_535 2 0.249
#> HSPC_541 2 0.000
#> LT-HSC_133 1 0.249
#> HSPC_511 3 0.000
#> HSPC_518 2 0.000
#> HSPC_524 2 0.000
#> HSPC_530 2 1.000
#> HSPC_536 1 0.000
#> HSPC_542 1 0.000
#> HSPC_548 2 0.000
#> LT-HSC_134 3 0.000
#> HSPC_519 1 0.000
#> HSPC_525 3 1.000
#> HSPC_531 2 1.000
#> HSPC_549 2 0.000
#> LT-HSC_135 2 0.751
#> HSPC_513 1 1.000
#> LT-HSC_136 3 1.000
#> HSPC_521 2 0.000
#> HSPC_539 2 0.000
#> HSPC_545 2 0.000
#> LT-HSC_137 2 0.249
#> HSPC_522 2 1.000
#> HSPC_546 2 0.498
#> LT-HSC_138 2 0.000
#> LT-HSC_140 2 0.000
#> Prog_537 2 1.000
#> LT-HSC_141 1 0.751
#> Prog_526 3 0.747
#> Prog_532 2 1.000
#> Prog_538 1 1.000
#> Prog_544 3 0.000
#> Prog_533 2 1.000
#> Prog_522 2 0.000
#> Prog_540 3 1.000
#> Prog_546 3 0.000
#> HSPC_559 2 0.253
#> HSPC_565 3 0.000
#> HSPC_577 2 0.249
#> HSPC_583 1 0.000
#> HSPC_589 2 0.000
#> LT-HSC_145 2 0.498
#> HSPC_560 2 1.000
#> HSPC_566 2 1.000
#> HSPC_572 3 0.502
#> HSPC_578 2 0.000
#> HSPC_584 2 0.000
#> HSPC_554 2 0.000
#> HSPC_561 1 0.000
#> HSPC_573 2 0.000
#> HSPC_585 2 0.000
#> HSPC_591 3 1.000
#> LT-HSC_147 2 1.000
#> HSPC_555 2 0.000
#> HSPC_562 3 1.000
#> HSPC_568 2 0.000
#> HSPC_581 1 0.000
#> HSPC_587 1 0.000
#> HSPC_593 2 0.253
#> LT-HSC_149 2 0.000
#> HSPC_564 1 0.000
#> HSPC_570 1 0.000
#> HSPC_576 2 0.000
#> HSPC_582 2 0.747
#> HSPC_588 1 0.000
#> HSPC_594 2 0.000
#> LT-HSC_150 2 0.000
#> HSPC_558 1 0.000
#> Prog_583 3 0.498
#> Prog_589 3 0.000
#> LT-HSC_152 2 0.000
#> Prog_573 3 0.498
#> Prog_591 3 0.000
#> LT-HSC_153 2 1.000
#> LT-HSC_154 1 0.000
#> Prog_563 1 0.000
#> LT-HSC_155 1 0.000
#> HSPC_607 3 0.000
#> HSPC_619 1 0.253
#> HSPC_625 2 0.000
#> LT-HSC_157 3 1.000
#> HSPC_602 2 1.000
#> HSPC_608 2 1.000
#> HSPC_620 2 0.000
#> HSPC_626 3 1.000
#> HSPC_632 1 0.000
#> LT-HSC_158 2 0.000
#> HSPC_609 3 1.000
#> HSPC_615 3 1.000
#> HSPC_621 1 0.000
#> HSPC_633 3 1.000
#> HSPC_604 2 0.000
#> HSPC_610 2 0.000
#> HSPC_616 1 0.000
#> HSPC_622 1 0.000
#> LT-HSC_160 3 1.000
#> HSPC_605 1 0.000
#> HSPC_611 1 0.000
#> LT-HSC_161 3 1.000
#> HSPC_599 2 1.000
#> HSPC_618 2 0.000
#> HSPC_630 2 0.000
#> LT-HSC_162 3 1.000
#> HSPC_600 3 1.000
#> Prog_601 1 0.000
#> Prog_619 2 0.000
#> LT-HSC_163 2 0.000
#> Prog_595 2 1.000
#> LT-HSC_165 2 0.000
#> LT-HSC_167 2 0.000
#> Prog_636 1 0.000
#> HSPC_655 1 0.000
#> HSPC_667 2 0.000
#> HSPC_673 2 0.000
#> LT-HSC_169 3 1.000
#> HSPC_650 1 0.000
#> HSPC_656 2 1.000
#> HSPC_662 2 0.000
#> HSPC_657 3 0.000
#> HSPC_669 2 0.000
#> HSPC_675 1 0.000
#> HSPC_670 3 1.000
#> HSPC_676 2 0.000
#> LT-HSC_172 2 1.000
#> HSPC_647 2 1.000
#> HSPC_653 1 0.000
#> HSPC_659 1 0.000
#> HSPC_677 3 0.000
#> LT-HSC_173 2 0.000
#> HSPC_648 2 0.502
#> HSPC_678 2 0.000
#> HSPC_642 1 0.000
#> LT-HSC_175 1 0.000
#> Prog_668 3 1.000
#> LT-HSC_176 2 0.747
#> Prog_669 3 0.000
#> LT-HSC_177 2 1.000
#> Prog_664 3 0.000
#> LT-HSC_178 1 0.000
#> Prog_641 3 0.000
#> HSPC_685 1 0.000
#> HSPC_691 1 0.000
#> HSPC_703 2 0.498
#> HSPC_709 3 0.000
#> HSPC_715 1 1.000
#> LT-HSC_181 1 0.000
#> HSPC_686 1 0.000
#> HSPC_692 3 0.000
#> HSPC_698 2 0.000
#> HSPC_704 2 0.000
#> HSPC_710 1 0.000
#> HSPC_716 2 0.000
#> LT-HSC_182 1 0.000
#> HSPC_680 2 0.000
#> HSPC_687 3 0.000
#> HSPC_693 3 0.249
#> HSPC_699 2 1.000
#> HSPC_711 1 0.000
#> HSPC_688 1 0.000
#> HSPC_694 1 0.000
#> HSPC_712 1 0.000
#> HSPC_718 1 0.000
#> HSPC_689 2 1.000
#> HSPC_713 1 1.000
#> HSPC_719 2 0.000
#> LT-HSC_185 3 1.000
#> HSPC_690 2 0.000
#> HSPC_702 2 0.000
#> HSPC_714 2 0.000
#> LT-HSC_186 1 0.000
#> HSPC_684 3 0.000
#> Prog_691 1 0.000
#> LT-HSC_189 1 0.000
#> LT-HSC_190 3 1.000
#> Prog_683 3 0.000
#> HSPC_727 2 0.000
#> HSPC_733 2 0.000
#> HSPC_739 3 0.249
#> HSPC_745 3 1.000
#> HSPC_751 2 1.000
#> HSPC_757 2 0.000
#> LT-HSC_193 2 0.000
#> HSPC_721 3 0.000
#> HSPC_728 1 0.000
#> HSPC_740 2 0.253
#> HSPC_746 3 1.000
#> HSPC_752 3 0.000
#> LT-HSC_194 2 0.000
#> HSPC_741 1 0.000
#> HSPC_747 2 0.000
#> HSPC_748 2 0.000
#> HSPC_754 1 0.000
#> LT-HSC_196 1 0.000
#> HSPC_749 2 0.000
#> LT-HSC_197 2 1.000
#> HSPC_725 3 0.000
#> HSPC_738 2 0.000
#> HSPC_756 2 0.000
#> LT-HSC_198 2 0.249
#> HSPC_726 1 0.000
#> LT-HSC_199 1 0.000
#> LT-HSC_200 2 0.000
#> Prog_729 3 0.000
#> Prog_741 1 0.000
#> LT-HSC_201 2 0.000
#> Prog_742 1 0.000
#> Prog_755 1 0.000
#> LT-HSC_203 1 0.000
#> HSPC_769 3 1.000
#> HSPC_775 3 0.000
#> HSPC_781 2 1.000
#> HSPC_787 3 0.000
#> HSPC_793 1 1.000
#> HSPC_799 3 0.498
#> LT-HSC_205 3 1.000
#> HSPC_763 1 1.000
#> HSPC_776 3 0.249
#> HSPC_782 2 1.000
#> HSPC_788 3 0.751
#> LT-HSC_206 2 0.000
#> HSPC_764 2 1.000
#> HSPC_783 2 0.000
#> HSPC_765 3 0.000
#> HSPC_802 2 0.000
#> LT-HSC_208 2 0.000
#> HSPC_803 2 1.000
#> LT-HSC_209 1 0.000
#> HSPC_792 1 0.000
#> HSPC_798 2 0.000
#> HSPC_804 2 0.000
#> LT-HSC_210 2 0.000
#> HSPC_768 3 1.000
#> LT-HSC_213 2 0.000
#> Prog_778 3 0.000
#> Prog_766 1 1.000
#> Prog_773 1 0.000
#> HSPC_811 1 1.000
#> HSPC_817 1 0.000
#> HSPC_823 1 1.000
#> HSPC_829 1 0.000
#> HSPC_847 3 1.000
#> HSPC_805 1 1.000
#> HSPC_830 1 1.000
#> HSPC_836 3 0.249
#> HSPC_842 3 1.000
#> HSPC_848 2 0.253
#> HSPC_806 3 0.000
#> HSPC_849 2 0.498
#> HSPC_844 2 1.000
#> HSPC_850 1 0.000
#> HSPC_827 2 0.000
#> HSPC_851 3 0.000
#> HSPC_809 2 0.000
#> HSPC_840 2 0.000
#> HSPC_852 2 0.253
#> HSPC_810 2 1.000
#> Prog_812 3 0.000
#> Prog_848 2 1.000
get_classes(res, k = 4)
#> class p
#> HSPC_007 1 0.000
#> HSPC_013 3 0.000
#> HSPC_019 1 0.000
#> LT-HSC_001 4 0.000
#> HSPC_014 2 0.000
#> HSPC_032 1 0.000
#> HSPC_038 2 0.000
#> HSPC_002 4 0.000
#> HSPC_009 2 0.253
#> HSPC_015 4 0.000
#> HSPC_021 2 0.249
#> HSPC_039 1 0.000
#> LT-HSC_003 4 0.000
#> HSPC_010 1 0.000
#> LT-HSC_004 2 1.000
#> HSPC_017 2 0.000
#> HSPC_029 1 0.000
#> HSPC_035 2 1.000
#> LT-HSC_005 1 0.000
#> HSPC_005 1 0.000
#> HSPC_024 2 0.000
#> LT-HSC_006 2 0.498
#> LT-HSC_009 2 0.000
#> Prog_034 1 0.000
#> Prog_041 1 0.000
#> LT-HSC_011 1 0.000
#> Prog_005 1 0.000
#> Prog_012 2 0.000
#> Prog_018 2 0.000
#> HSPC_073 2 0.000
#> LT-HSC_013 2 0.253
#> HSPC_056 2 0.000
#> HSPC_068 2 1.000
#> HSPC_074 2 0.000
#> LT-HSC_014 2 0.000
#> HSPC_057 2 0.751
#> HSPC_075 2 0.498
#> LT-HSC_015 2 0.000
#> LT-HSC_016 2 0.000
#> HSPC_059 1 0.000
#> HSPC_083 2 0.000
#> LT-HSC_017 2 0.000
#> HSPC_047 4 0.751
#> LT-HSC_018 2 0.000
#> LT-HSC_019 1 0.000
#> LT-HSC_022 2 0.000
#> LT-HSC_023 2 0.000
#> Prog_060 1 0.000
#> HSPC_091 1 0.000
#> HSPC_097 3 0.000
#> HSPC_103 2 0.000
#> HSPC_115 2 0.000
#> HSPC_121 4 0.249
#> LT-HSC_025 1 0.000
#> HSPC_092 4 1.000
#> HSPC_104 4 0.000
#> HSPC_116 1 0.000
#> LT-HSC_026 2 0.747
#> HSPC_086 1 0.000
#> HSPC_093 1 0.000
#> HSPC_105 2 1.000
#> HSPC_111 2 0.000
#> HSPC_123 2 1.000
#> LT-HSC_027 4 0.000
#> HSPC_087 2 0.000
#> HSPC_106 2 1.000
#> HSPC_112 1 0.000
#> HSPC_124 1 0.000
#> HSPC_095 2 0.498
#> HSPC_113 4 1.000
#> HSPC_119 4 0.000
#> LT-HSC_029 1 0.000
#> LT-HSC_030 1 0.000
#> Prog_121 1 0.000
#> Prog_104 1 0.000
#> Prog_086 1 0.000
#> LT-HSC_035 1 0.000
#> Prog_120 3 0.000
#> HSPC_133 2 1.000
#> HSPC_139 2 0.249
#> HSPC_145 4 0.000
#> HSPC_163 4 0.751
#> LT-HSC_037 4 0.000
#> HSPC_134 3 1.000
#> HSPC_140 3 1.000
#> HSPC_152 2 0.000
#> HSPC_164 2 0.000
#> LT-HSC_038 4 0.000
#> HSPC_128 3 0.000
#> HSPC_141 4 0.000
#> HSPC_147 4 0.000
#> HSPC_153 2 1.000
#> LT-HSC_039 4 1.000
#> HSPC_129 1 0.000
#> HSPC_160 1 0.000
#> LT-HSC_040 2 1.000
#> HSPC_137 1 0.000
#> HSPC_143 2 1.000
#> HSPC_149 2 0.000
#> HSPC_155 4 0.000
#> HSPC_167 4 0.000
#> LT-HSC_041 2 0.000
#> HSPC_131 2 1.000
#> HSPC_150 1 0.000
#> LT-HSC_042 2 1.000
#> Prog_164 1 0.000
#> Prog_147 1 0.000
#> Prog_148 3 0.000
#> Prog_160 2 1.000
#> LT-HSC_047 1 0.000
#> Prog_138 1 0.000
#> Prog_156 1 0.000
#> LT-HSC_048 3 0.502
#> HSPC_181 2 0.000
#> HSPC_187 2 0.249
#> HSPC_205 2 1.000
#> LT-HSC_049 2 1.000
#> HSPC_176 2 0.000
#> HSPC_182 4 0.000
#> HSPC_188 1 0.000
#> HSPC_194 1 0.000
#> HSPC_200 2 0.000
#> LT-HSC_050 2 0.000
#> HSPC_170 4 0.000
#> HSPC_177 2 0.747
#> HSPC_201 1 0.000
#> LT-HSC_051 2 0.000
#> HSPC_171 2 0.000
#> HSPC_184 1 0.000
#> HSPC_208 2 0.000
#> HSPC_185 4 0.000
#> HSPC_191 2 0.000
#> HSPC_197 1 0.000
#> HSPC_209 1 0.000
#> LT-HSC_053 1 0.000
#> HSPC_173 3 0.000
#> HSPC_192 2 0.751
#> LT-HSC_054 4 0.000
#> Prog_181 1 0.000
#> Prog_169 1 0.000
#> Prog_194 3 0.751
#> Prog_202 1 0.000
#> LT-HSC_059 1 0.000
#> Prog_198 1 0.000
#> Prog_204 3 1.000
#> Prog_174 1 0.000
#> HSPC_217 1 0.000
#> HSPC_223 2 0.000
#> HSPC_229 3 0.000
#> HSPC_235 2 0.249
#> HSPC_241 1 0.000
#> HSPC_247 3 0.000
#> LT-HSC_061 1 1.000
#> HSPC_218 2 0.502
#> HSPC_224 2 0.000
#> HSPC_242 4 0.000
#> HSPC_248 2 0.000
#> LT-HSC_062 4 0.000
#> HSPC_212 4 0.000
#> HSPC_225 2 0.000
#> HSPC_231 3 0.000
#> HSPC_237 2 0.747
#> HSPC_249 2 0.498
#> HSPC_220 2 0.000
#> HSPC_226 1 0.000
#> HSPC_232 4 0.000
#> HSPC_238 1 0.000
#> HSPC_227 2 0.000
#> HSPC_239 2 1.000
#> HSPC_245 2 0.498
#> HSPC_228 3 0.000
#> HSPC_234 1 0.000
#> HSPC_246 2 0.000
#> HSPC_252 1 0.000
#> Prog_235 3 0.000
#> Prog_241 2 0.751
#> LT-HSC_067 1 0.000
#> Prog_219 1 0.000
#> Prog_220 1 0.000
#> Prog_251 1 0.000
#> HSPC_259 4 1.000
#> HSPC_265 2 0.000
#> HSPC_277 4 0.000
#> HSPC_283 2 1.000
#> HSPC_289 2 1.000
#> LT-HSC_073 4 0.000
#> HSPC_260 1 0.000
#> HSPC_266 2 1.000
#> HSPC_272 1 0.000
#> HSPC_284 1 0.000
#> LT-HSC_074 2 0.000
#> HSPC_254 2 1.000
#> HSPC_273 1 0.000
#> HSPC_262 1 0.000
#> HSPC_274 2 0.000
#> HSPC_281 3 0.000
#> LT-HSC_077 2 0.502
#> HSPC_264 2 0.000
#> LT-HSC_078 2 0.000
#> LT-HSC_079 1 0.000
#> LT-HSC_083 1 0.000
#> Prog_257 1 0.000
#> Prog_264 3 0.000
#> HSPC_301 3 0.000
#> HSPC_307 2 0.000
#> HSPC_319 1 1.000
#> HSPC_325 2 0.000
#> HSPC_331 2 0.000
#> LT-HSC_085 2 0.000
#> HSPC_302 3 1.000
#> HSPC_326 2 0.000
#> HSPC_296 2 0.000
#> HSPC_309 2 0.000
#> HSPC_315 4 1.000
#> LT-HSC_087 1 0.000
#> HSPC_297 2 0.000
#> HSPC_310 2 0.000
#> HSPC_316 2 0.751
#> HSPC_334 2 0.000
#> HSPC_311 1 0.000
#> HSPC_317 4 0.000
#> HSPC_335 2 0.000
#> LT-HSC_089 2 0.000
#> HSPC_318 2 0.000
#> HSPC_336 4 0.000
#> Prog_302 4 1.000
#> LT-HSC_092 4 1.000
#> Prog_303 2 1.000
#> Prog_309 2 1.000
#> Prog_317 1 0.000
#> Prog_306 2 0.000
#> HSPC_355 1 0.000
#> HSPC_361 3 0.000
#> HSPC_367 2 1.000
#> HSPC_373 4 0.000
#> LT-HSC_097 4 1.000
#> HSPC_337 2 0.000
#> HSPC_350 2 0.000
#> HSPC_357 1 0.000
#> HSPC_363 2 1.000
#> HSPC_369 1 0.000
#> HSPC_375 1 0.000
#> LT-HSC_099 3 1.000
#> HSPC_340 1 0.000
#> HSPC_347 1 0.000
#> HSPC_365 4 0.000
#> HSPC_354 2 0.000
#> HSPC_366 1 0.000
#> HSPC_378 1 0.000
#> Prog_344 1 0.000
#> LT-HSC_104 1 0.000
#> Prog_347 1 0.000
#> Prog_365 1 0.000
#> LT-HSC_107 3 0.249
#> Prog_348 1 0.000
#> HSPC_385 1 0.000
#> HSPC_397 1 0.000
#> HSPC_409 3 0.000
#> HSPC_415 4 0.000
#> HSPC_379 1 0.000
#> HSPC_381 1 0.000
#> HSPC_394 1 0.000
#> HSPC_401 1 0.000
#> HSPC_383 2 1.000
#> HSPC_414 1 0.000
#> HSPC_384 1 0.000
#> Prog_391 1 0.000
#> Prog_400 1 0.000
#> HSPC_433 1 0.000
#> HSPC_439 1 1.000
#> HSPC_445 1 0.000
#> HSPC_451 3 0.000
#> HSPC_457 2 0.253
#> LT-HSC_109 2 0.502
#> HSPC_427 3 0.000
#> HSPC_434 1 0.000
#> HSPC_446 2 1.000
#> HSPC_452 1 0.000
#> HSPC_458 1 0.000
#> HSPC_464 1 0.000
#> HSPC_428 1 0.000
#> LT-HSC_111 2 0.249
#> HSPC_429 1 0.000
#> HSPC_437 1 0.000
#> HSPC_455 2 0.000
#> HSPC_438 1 0.000
#> HSPC_444 2 0.000
#> HSPC_450 2 0.000
#> LT-HSC_114 4 0.000
#> HSPC_432 2 1.000
#> Prog_427 2 0.000
#> Prog_452 1 0.000
#> Prog_442 1 0.000
#> LT-HSC_118 1 0.000
#> Prog_461 3 0.751
#> LT-HSC_119 1 0.000
#> Prog_438 2 0.000
#> HSPC_475 2 0.000
#> HSPC_481 3 1.000
#> HSPC_487 1 0.000
#> HSPC_493 2 0.000
#> HSPC_499 2 0.502
#> LT-HSC_121 1 0.000
#> HSPC_469 4 1.000
#> HSPC_476 1 0.000
#> HSPC_482 4 0.000
#> HSPC_488 2 1.000
#> HSPC_494 2 0.502
#> HSPC_500 2 0.000
#> HSPC_506 2 1.000
#> HSPC_470 2 0.751
#> HSPC_483 2 1.000
#> HSPC_501 3 0.000
#> HSPC_507 2 0.000
#> LT-HSC_123 2 0.000
#> HSPC_471 2 1.000
#> HSPC_478 2 0.253
#> HSPC_484 1 0.000
#> HSPC_497 2 0.502
#> HSPC_504 2 0.000
#> LT-HSC_127 1 0.000
#> LT-HSC_129 1 0.000
#> Prog_480 3 0.000
#> Prog_498 1 0.000
#> HSPC_517 4 0.000
#> HSPC_529 1 0.000
#> HSPC_535 2 0.498
#> HSPC_541 2 0.000
#> LT-HSC_133 1 1.000
#> HSPC_511 3 0.000
#> HSPC_518 2 0.000
#> HSPC_524 2 0.000
#> HSPC_530 2 1.000
#> HSPC_536 1 0.000
#> HSPC_542 1 0.000
#> HSPC_548 2 0.000
#> LT-HSC_134 4 0.000
#> HSPC_519 1 0.000
#> HSPC_525 4 0.000
#> HSPC_531 2 1.000
#> HSPC_549 2 0.000
#> LT-HSC_135 2 0.000
#> HSPC_513 1 1.000
#> LT-HSC_136 2 1.000
#> HSPC_521 2 0.249
#> HSPC_539 2 0.000
#> HSPC_545 2 0.000
#> LT-HSC_137 2 0.000
#> HSPC_522 2 1.000
#> HSPC_546 4 0.000
#> LT-HSC_138 2 0.000
#> LT-HSC_140 4 1.000
#> Prog_537 2 1.000
#> LT-HSC_141 1 1.000
#> Prog_526 3 1.000
#> Prog_532 2 1.000
#> Prog_538 4 0.751
#> Prog_544 3 1.000
#> Prog_533 2 1.000
#> Prog_522 2 0.000
#> Prog_540 4 0.000
#> Prog_546 3 0.000
#> HSPC_559 2 0.502
#> HSPC_565 3 1.000
#> HSPC_577 2 0.747
#> HSPC_583 1 0.000
#> HSPC_589 2 0.000
#> LT-HSC_145 2 0.502
#> HSPC_560 2 1.000
#> HSPC_566 4 0.000
#> HSPC_572 2 1.000
#> HSPC_578 2 0.249
#> HSPC_584 2 0.000
#> HSPC_554 2 0.000
#> HSPC_561 1 0.000
#> HSPC_573 2 0.000
#> HSPC_585 2 0.000
#> HSPC_591 4 0.000
#> LT-HSC_147 4 0.000
#> HSPC_555 2 0.000
#> HSPC_562 4 0.000
#> HSPC_568 2 0.000
#> HSPC_581 1 0.000
#> HSPC_587 1 0.000
#> HSPC_593 2 0.253
#> LT-HSC_149 2 0.000
#> HSPC_564 1 0.000
#> HSPC_570 1 0.000
#> HSPC_576 2 0.000
#> HSPC_582 2 0.747
#> HSPC_588 1 1.000
#> HSPC_594 2 0.000
#> LT-HSC_150 2 0.000
#> HSPC_558 1 0.000
#> Prog_583 3 1.000
#> Prog_589 3 0.000
#> LT-HSC_152 2 0.000
#> Prog_573 3 1.000
#> Prog_591 4 1.000
#> LT-HSC_153 2 1.000
#> LT-HSC_154 1 0.000
#> Prog_563 1 0.000
#> LT-HSC_155 1 0.000
#> HSPC_607 3 0.000
#> HSPC_619 1 0.000
#> HSPC_625 2 0.000
#> LT-HSC_157 4 0.000
#> HSPC_602 2 1.000
#> HSPC_608 2 1.000
#> HSPC_620 2 0.000
#> HSPC_626 4 0.000
#> HSPC_632 1 0.000
#> LT-HSC_158 2 0.000
#> HSPC_609 4 0.000
#> HSPC_615 4 0.000
#> HSPC_621 1 0.000
#> HSPC_633 4 0.000
#> HSPC_604 2 0.000
#> HSPC_610 2 0.000
#> HSPC_616 1 0.000
#> HSPC_622 1 0.000
#> LT-HSC_160 4 0.000
#> HSPC_605 1 0.000
#> HSPC_611 1 0.000
#> LT-HSC_161 4 0.000
#> HSPC_599 2 1.000
#> HSPC_618 2 0.000
#> HSPC_630 2 0.249
#> LT-HSC_162 4 0.000
#> HSPC_600 3 1.000
#> Prog_601 1 0.000
#> Prog_619 2 0.000
#> LT-HSC_163 2 0.000
#> Prog_595 2 1.000
#> LT-HSC_165 2 0.000
#> LT-HSC_167 2 0.000
#> Prog_636 1 0.000
#> HSPC_655 1 0.000
#> HSPC_667 2 0.000
#> HSPC_673 2 0.000
#> LT-HSC_169 4 0.000
#> HSPC_650 1 0.000
#> HSPC_656 2 1.000
#> HSPC_662 2 0.000
#> HSPC_657 4 1.000
#> HSPC_669 2 0.000
#> HSPC_675 1 1.000
#> HSPC_670 4 0.000
#> HSPC_676 2 0.000
#> LT-HSC_172 4 0.000
#> HSPC_647 2 1.000
#> HSPC_653 1 0.000
#> HSPC_659 1 0.000
#> HSPC_677 4 0.000
#> LT-HSC_173 2 0.000
#> HSPC_648 2 0.000
#> HSPC_678 2 0.000
#> HSPC_642 1 0.000
#> LT-HSC_175 1 0.000
#> Prog_668 3 1.000
#> LT-HSC_176 4 0.000
#> Prog_669 3 0.253
#> LT-HSC_177 2 1.000
#> Prog_664 3 0.000
#> LT-HSC_178 1 0.000
#> Prog_641 3 0.000
#> HSPC_685 1 0.000
#> HSPC_691 1 0.000
#> HSPC_703 2 1.000
#> HSPC_709 3 0.000
#> HSPC_715 1 0.502
#> LT-HSC_181 4 0.000
#> HSPC_686 1 0.000
#> HSPC_692 3 0.000
#> HSPC_698 2 0.000
#> HSPC_704 2 0.000
#> HSPC_710 1 0.000
#> HSPC_716 2 0.000
#> LT-HSC_182 1 0.000
#> HSPC_680 2 0.000
#> HSPC_687 3 0.000
#> HSPC_693 4 0.751
#> HSPC_699 2 1.000
#> HSPC_711 1 0.000
#> HSPC_688 1 0.000
#> HSPC_694 1 0.000
#> HSPC_712 1 0.000
#> HSPC_718 1 0.000
#> HSPC_689 2 1.000
#> HSPC_713 4 0.498
#> HSPC_719 2 0.000
#> LT-HSC_185 4 0.000
#> HSPC_690 2 0.751
#> HSPC_702 2 0.000
#> HSPC_714 2 0.249
#> LT-HSC_186 1 0.000
#> HSPC_684 3 1.000
#> Prog_691 1 0.000
#> LT-HSC_189 1 0.000
#> LT-HSC_190 4 1.000
#> Prog_683 3 0.000
#> HSPC_727 2 0.000
#> HSPC_733 2 0.000
#> HSPC_739 2 1.000
#> HSPC_745 4 0.000
#> HSPC_751 2 1.000
#> HSPC_757 2 0.000
#> LT-HSC_193 2 0.000
#> HSPC_721 3 0.000
#> HSPC_728 1 0.000
#> HSPC_740 2 0.000
#> HSPC_746 3 1.000
#> HSPC_752 3 0.000
#> LT-HSC_194 2 0.249
#> HSPC_741 1 0.000
#> HSPC_747 2 0.502
#> HSPC_748 2 0.000
#> HSPC_754 1 0.000
#> LT-HSC_196 1 0.000
#> HSPC_749 2 0.000
#> LT-HSC_197 4 0.000
#> HSPC_725 3 0.000
#> HSPC_738 2 0.000
#> HSPC_756 2 0.000
#> LT-HSC_198 2 0.000
#> HSPC_726 1 0.000
#> LT-HSC_199 1 0.000
#> LT-HSC_200 2 0.000
#> Prog_729 3 0.000
#> Prog_741 1 0.000
#> LT-HSC_201 2 0.000
#> Prog_742 1 0.000
#> Prog_755 1 0.000
#> LT-HSC_203 1 0.000
#> HSPC_769 2 1.000
#> HSPC_775 4 1.000
#> HSPC_781 2 1.000
#> HSPC_787 3 0.000
#> HSPC_793 4 1.000
#> HSPC_799 4 0.249
#> LT-HSC_205 4 0.000
#> HSPC_763 1 0.000
#> HSPC_776 3 0.249
#> HSPC_782 2 1.000
#> HSPC_788 3 1.000
#> LT-HSC_206 2 0.000
#> HSPC_764 2 1.000
#> HSPC_783 2 0.249
#> HSPC_765 3 0.498
#> HSPC_802 2 0.249
#> LT-HSC_208 2 0.000
#> HSPC_803 2 1.000
#> LT-HSC_209 1 0.000
#> HSPC_792 1 0.000
#> HSPC_798 2 0.000
#> HSPC_804 2 0.000
#> LT-HSC_210 2 0.000
#> HSPC_768 3 1.000
#> LT-HSC_213 2 0.000
#> Prog_778 3 0.000
#> Prog_766 1 0.000
#> Prog_773 1 0.000
#> HSPC_811 4 0.502
#> HSPC_817 1 0.000
#> HSPC_823 1 0.000
#> HSPC_829 1 0.000
#> HSPC_847 4 0.000
#> HSPC_805 1 0.000
#> HSPC_830 1 0.000
#> HSPC_836 3 0.253
#> HSPC_842 2 1.000
#> HSPC_848 2 0.000
#> HSPC_806 3 0.000
#> HSPC_849 2 1.000
#> HSPC_844 2 1.000
#> HSPC_850 1 0.000
#> HSPC_827 2 0.000
#> HSPC_851 3 0.249
#> HSPC_809 2 0.000
#> HSPC_840 2 0.000
#> HSPC_852 2 0.000
#> HSPC_810 2 1.000
#> Prog_812 3 0.249
#> Prog_848 2 1.000
Heatmaps for the consensus matrix. It visualizes the probability of two samples to be in a same group.
consensus_heatmap(res, k = 2)
consensus_heatmap(res, k = 3)
consensus_heatmap(res, k = 4)
Heatmaps for the membership of samples in all partitions to see how consistent they are:
membership_heatmap(res, k = 2)
membership_heatmap(res, k = 3)
membership_heatmap(res, k = 4)
As soon as the classes for columns are determined, the signatures that are significantly different between subgroups can be looked for. Following are the heatmaps for signatures.
Signature heatmaps where rows are scaled:
Signature heatmaps where rows are not scaled:
get_signatures(res, k = 2, scale_rows = FALSE)
get_signatures(res, k = 3, scale_rows = FALSE)
get_signatures(res, k = 4, scale_rows = FALSE)
Compare the overlap of signatures from different k:
compare_signatures(res)
get_signature() returns a data frame invisibly. To get the list of signatures, the function
call should be assigned to a variable explicitly. In following code, if plot argument is set
to FALSE, no heatmap is plotted while only the differential analysis is performed.
# code only for demonstration
tb = get_signature(res, k = ..., plot = FALSE)
An example of the output of tb is:
#> which_row fdr mean_1 mean_2 scaled_mean_1 scaled_mean_2 km
#> 1 38 0.042760348 8.373488 9.131774 -0.5533452 0.5164555 1
#> 2 40 0.018707592 7.106213 8.469186 -0.6173731 0.5762149 1
#> 3 55 0.019134737 10.221463 11.207825 -0.6159697 0.5749050 1
#> 4 59 0.006059896 5.921854 7.869574 -0.6899429 0.6439467 1
#> 5 60 0.018055526 8.928898 10.211722 -0.6204761 0.5791110 1
#> 6 98 0.009384629 15.714769 14.887706 0.6635654 -0.6193277 2
...
The columns in tb are:
which_row: row indices corresponding to the input matrix.fdr: FDR for the differential test. mean_x: The mean value in group x.scaled_mean_x: The mean value in group x after rows are scaled.km: Row groups if k-means clustering is applied to rows (which is done by automatically selecting number of clusters).If there are too many signatures, top_signatures = ... can be set to only show the
signatures with the highest FDRs:
# code only for demonstration
# e.g. to show the top 500 most significant rows
tb = get_signature(res, k = ..., top_signatures = 500)
If the signatures are defined as these which are uniquely high in current group, diff_method argument
can be set to "uniquely_high_in_one_group":
# code only for demonstration
tb = get_signature(res, k = ..., diff_method = "uniquely_high_in_one_group")
UMAP plot which shows how samples are separated.
dimension_reduction(res, k = 2, method = "UMAP")
dimension_reduction(res, k = 3, method = "UMAP")
dimension_reduction(res, k = 4, method = "UMAP")
Following heatmap shows how subgroups are split when increasing k:
collect_classes(res)
If matrix rows can be associated to genes, consider to use functional_enrichment(res,
...) to perform function enrichment for the signature genes. See this vignette for more detailed explanations.
Parent node: Node02. Child nodes: Node0111 , Node0112 , Node0121 , Node0122 , Node0131 , Node0132-leaf , Node0141-leaf , Node0142-leaf , Node0211 , Node0212 , Node0213-leaf , Node0311-leaf , Node0312-leaf , Node0321-leaf , Node0322-leaf , Node0331-leaf , Node0332-leaf , Node0411-leaf , Node0412-leaf , Node0413-leaf , Node0421-leaf , Node0422-leaf , Node0423-leaf .
The object with results only for a single top-value method and a single partitioning method can be extracted as:
res = res_rh["021"]
A summary of res and all the functions that can be applied to it:
res
#> A 'ConsensusPartition' object with k = 2, 3, 4.
#> On a matrix with 17718 rows and 197 columns.
#> Top rows (1772) are extracted by 'ATC' method.
#> Subgroups are detected by 'skmeans' method.
#> Performed in total 150 partitions by row resampling.
#> Best k for subgroups seems to be 4.
#>
#> Following methods can be applied to this 'ConsensusPartition' object:
#> [1] "cola_report" "collect_classes" "collect_plots"
#> [4] "collect_stats" "colnames" "compare_partitions"
#> [7] "compare_signatures" "consensus_heatmap" "dimension_reduction"
#> [10] "functional_enrichment" "get_anno_col" "get_anno"
#> [13] "get_classes" "get_consensus" "get_matrix"
#> [16] "get_membership" "get_param" "get_signatures"
#> [19] "get_stats" "is_best_k" "is_stable_k"
#> [22] "membership_heatmap" "ncol" "nrow"
#> [25] "plot_ecdf" "predict_classes" "rownames"
#> [28] "select_partition_number" "show" "suggest_best_k"
#> [31] "test_to_known_factors" "top_rows_heatmap"
collect_plots() function collects all the plots made from res for all k (number of subgroups)
into one single page to provide an easy and fast comparison between different k.
collect_plots(res)
The plots are:
k and the heatmap of
predicted classes for each k.k.k.k.All the plots in panels can be made by individual functions and they are plotted later in this section.
select_partition_number() produces several plots showing different
statistics for choosing “optimized” k. There are following statistics:
k;k, the area increased is defined as \(A_k - A_{k-1}\).The detailed explanations of these statistics can be found in the cola vignette.
Generally speaking, higher 1-PAC score, higher mean silhouette score or higher
concordance corresponds to better partition. Rand index and Jaccard index
measure how similar the current partition is compared to partition with k-1.
If they are too similar, we won't accept k is better than k-1.
select_partition_number(res)
The numeric values for all these statistics can be obtained by get_stats().
get_stats(res)
#> k 1-PAC mean_silhouette concordance area_increased Rand Jaccard
#> 2 2 1.000 0.997 0.998 0.492 0.508 0.508
#> 3 3 1.000 0.966 0.983 0.260 0.836 0.689
#> 4 4 0.948 0.930 0.971 0.206 0.813 0.546
suggest_best_k() suggests the best \(k\) based on these statistics. The rules are as follows:
suggest_best_k(res)
#> [1] 4
#> attr(,"optional")
#> [1] 2 3
There is also optional best \(k\) = 2 3 that is worth to check.
Following is the table of the partitions (You need to click the show/hide
code output link to see it). The membership matrix (columns with name p*)
is inferred by
clue::cl_consensus()
function with the SE method. Basically the value in the membership matrix
represents the probability to belong to a certain group. The finall subgroup
label for an item is determined with the group with highest probability it
belongs to.
In get_classes() function, the entropy is calculated from the membership
matrix and the silhouette score is calculated from the consensus matrix.
cbind(get_classes(res, k = 2), get_membership(res, k = 2))
#> class entropy silhouette p1 p2
#> HSPC_007 2 0.000 0.997 0.00 1.00
#> HSPC_019 1 0.000 0.999 1.00 0.00
#> HSPC_032 1 0.000 0.999 1.00 0.00
#> HSPC_039 1 0.000 0.999 1.00 0.00
#> HSPC_010 1 0.000 0.999 1.00 0.00
#> HSPC_029 1 0.000 0.999 1.00 0.00
#> LT-HSC_005 1 0.000 0.999 1.00 0.00
#> HSPC_005 1 0.000 0.999 1.00 0.00
#> Prog_034 1 0.000 0.999 1.00 0.00
#> Prog_041 2 0.000 0.997 0.00 1.00
#> LT-HSC_011 2 0.000 0.997 0.00 1.00
#> Prog_005 2 0.000 0.997 0.00 1.00
#> HSPC_059 1 0.000 0.999 1.00 0.00
#> LT-HSC_019 1 0.000 0.999 1.00 0.00
#> Prog_060 2 0.000 0.997 0.00 1.00
#> HSPC_091 2 0.000 0.997 0.00 1.00
#> LT-HSC_025 2 0.000 0.997 0.00 1.00
#> HSPC_092 2 0.000 0.997 0.00 1.00
#> HSPC_116 1 0.000 0.999 1.00 0.00
#> HSPC_086 1 0.000 0.999 1.00 0.00
#> HSPC_093 1 0.000 0.999 1.00 0.00
#> HSPC_112 1 0.000 0.999 1.00 0.00
#> HSPC_124 1 0.000 0.999 1.00 0.00
#> LT-HSC_029 2 0.000 0.997 0.00 1.00
#> LT-HSC_030 2 0.000 0.997 0.00 1.00
#> Prog_121 2 0.000 0.997 0.00 1.00
#> Prog_104 1 0.000 0.999 1.00 0.00
#> Prog_086 2 0.000 0.997 0.00 1.00
#> LT-HSC_035 2 0.000 0.997 0.00 1.00
#> HSPC_129 1 0.000 0.999 1.00 0.00
#> HSPC_160 1 0.000 0.999 1.00 0.00
#> HSPC_137 1 0.000 0.999 1.00 0.00
#> HSPC_150 1 0.000 0.999 1.00 0.00
#> Prog_164 2 0.000 0.997 0.00 1.00
#> Prog_147 1 0.000 0.999 1.00 0.00
#> LT-HSC_047 2 0.000 0.997 0.00 1.00
#> Prog_138 1 0.000 0.999 1.00 0.00
#> Prog_156 2 0.000 0.997 0.00 1.00
#> HSPC_188 1 0.000 0.999 1.00 0.00
#> HSPC_194 1 0.000 0.999 1.00 0.00
#> HSPC_201 1 0.000 0.999 1.00 0.00
#> HSPC_184 2 0.000 0.997 0.00 1.00
#> HSPC_197 1 0.000 0.999 1.00 0.00
#> HSPC_209 1 0.000 0.999 1.00 0.00
#> LT-HSC_053 1 0.000 0.999 1.00 0.00
#> Prog_181 1 0.000 0.999 1.00 0.00
#> Prog_169 1 0.000 0.999 1.00 0.00
#> Prog_202 2 0.000 0.997 0.00 1.00
#> LT-HSC_059 2 0.000 0.997 0.00 1.00
#> Prog_198 1 0.000 0.999 1.00 0.00
#> Prog_174 2 0.000 0.997 0.00 1.00
#> HSPC_217 2 0.000 0.997 0.00 1.00
#> HSPC_241 1 0.000 0.999 1.00 0.00
#> LT-HSC_061 2 0.000 0.997 0.00 1.00
#> HSPC_226 1 0.000 0.999 1.00 0.00
#> HSPC_238 2 0.000 0.997 0.00 1.00
#> HSPC_234 1 0.000 0.999 1.00 0.00
#> HSPC_252 1 0.000 0.999 1.00 0.00
#> LT-HSC_067 2 0.000 0.997 0.00 1.00
#> Prog_219 2 0.000 0.997 0.00 1.00
#> Prog_220 2 0.000 0.997 0.00 1.00
#> Prog_251 2 0.000 0.997 0.00 1.00
#> HSPC_260 1 0.000 0.999 1.00 0.00
#> HSPC_272 1 0.000 0.999 1.00 0.00
#> HSPC_284 1 0.000 0.999 1.00 0.00
#> HSPC_273 1 0.000 0.999 1.00 0.00
#> HSPC_262 2 0.000 0.997 0.00 1.00
#> LT-HSC_079 1 0.000 0.999 1.00 0.00
#> LT-HSC_083 1 0.242 0.958 0.96 0.04
#> Prog_257 2 0.000 0.997 0.00 1.00
#> HSPC_319 2 0.000 0.997 0.00 1.00
#> LT-HSC_087 2 0.000 0.997 0.00 1.00
#> HSPC_311 2 0.000 0.997 0.00 1.00
#> Prog_302 2 0.000 0.997 0.00 1.00
#> LT-HSC_092 2 0.000 0.997 0.00 1.00
#> Prog_317 2 0.000 0.997 0.00 1.00
#> HSPC_355 2 0.000 0.997 0.00 1.00
#> LT-HSC_097 2 0.000 0.997 0.00 1.00
#> HSPC_357 1 0.000 0.999 1.00 0.00
#> HSPC_369 1 0.000 0.999 1.00 0.00
#> HSPC_375 1 0.000 0.999 1.00 0.00
#> HSPC_340 2 0.000 0.997 0.00 1.00
#> HSPC_347 1 0.000 0.999 1.00 0.00
#> HSPC_366 2 0.000 0.997 0.00 1.00
#> HSPC_378 2 0.000 0.997 0.00 1.00
#> Prog_344 1 0.000 0.999 1.00 0.00
#> LT-HSC_104 2 0.000 0.997 0.00 1.00
#> Prog_347 2 0.000 0.997 0.00 1.00
#> Prog_365 2 0.000 0.997 0.00 1.00
#> Prog_348 2 0.000 0.997 0.00 1.00
#> HSPC_385 1 0.000 0.999 1.00 0.00
#> HSPC_397 1 0.000 0.999 1.00 0.00
#> HSPC_379 2 0.469 0.890 0.10 0.90
#> HSPC_381 1 0.000 0.999 1.00 0.00
#> HSPC_394 1 0.000 0.999 1.00 0.00
#> HSPC_401 1 0.000 0.999 1.00 0.00
#> HSPC_414 1 0.000 0.999 1.00 0.00
#> HSPC_384 1 0.000 0.999 1.00 0.00
#> Prog_391 1 0.141 0.979 0.98 0.02
#> Prog_400 1 0.000 0.999 1.00 0.00
#> HSPC_433 2 0.000 0.997 0.00 1.00
#> HSPC_439 2 0.000 0.997 0.00 1.00
#> HSPC_445 2 0.000 0.997 0.00 1.00
#> HSPC_434 1 0.000 0.999 1.00 0.00
#> HSPC_452 1 0.000 0.999 1.00 0.00
#> HSPC_458 1 0.000 0.999 1.00 0.00
#> HSPC_464 1 0.000 0.999 1.00 0.00
#> HSPC_428 2 0.000 0.997 0.00 1.00
#> HSPC_429 1 0.000 0.999 1.00 0.00
#> HSPC_437 1 0.000 0.999 1.00 0.00
#> HSPC_438 2 0.000 0.997 0.00 1.00
#> Prog_452 2 0.000 0.997 0.00 1.00
#> Prog_442 1 0.000 0.999 1.00 0.00
#> LT-HSC_118 1 0.000 0.999 1.00 0.00
#> LT-HSC_119 2 0.000 0.997 0.00 1.00
#> HSPC_487 2 0.000 0.997 0.00 1.00
#> LT-HSC_121 1 0.000 0.999 1.00 0.00
#> HSPC_476 1 0.000 0.999 1.00 0.00
#> HSPC_484 1 0.000 0.999 1.00 0.00
#> LT-HSC_127 2 0.000 0.997 0.00 1.00
#> LT-HSC_129 1 0.000 0.999 1.00 0.00
#> Prog_498 2 0.000 0.997 0.00 1.00
#> HSPC_529 1 0.000 0.999 1.00 0.00
#> LT-HSC_133 2 0.000 0.997 0.00 1.00
#> HSPC_536 1 0.000 0.999 1.00 0.00
#> HSPC_542 1 0.000 0.999 1.00 0.00
#> HSPC_519 1 0.000 0.999 1.00 0.00
#> HSPC_513 2 0.000 0.997 0.00 1.00
#> LT-HSC_141 1 0.000 0.999 1.00 0.00
#> Prog_538 2 0.000 0.997 0.00 1.00
#> HSPC_583 1 0.000 0.999 1.00 0.00
#> HSPC_561 1 0.000 0.999 1.00 0.00
#> HSPC_581 1 0.000 0.999 1.00 0.00
#> HSPC_587 1 0.000 0.999 1.00 0.00
#> HSPC_564 1 0.000 0.999 1.00 0.00
#> HSPC_570 1 0.000 0.999 1.00 0.00
#> HSPC_588 2 0.000 0.997 0.00 1.00
#> HSPC_558 1 0.000 0.999 1.00 0.00
#> LT-HSC_154 1 0.000 0.999 1.00 0.00
#> Prog_563 2 0.000 0.997 0.00 1.00
#> LT-HSC_155 1 0.000 0.999 1.00 0.00
#> HSPC_619 1 0.000 0.999 1.00 0.00
#> HSPC_632 1 0.000 0.999 1.00 0.00
#> HSPC_621 1 0.000 0.999 1.00 0.00
#> HSPC_616 1 0.000 0.999 1.00 0.00
#> HSPC_622 1 0.000 0.999 1.00 0.00
#> HSPC_605 1 0.000 0.999 1.00 0.00
#> HSPC_611 1 0.000 0.999 1.00 0.00
#> Prog_601 1 0.000 0.999 1.00 0.00
#> Prog_636 1 0.000 0.999 1.00 0.00
#> HSPC_655 2 0.000 0.997 0.00 1.00
#> HSPC_650 1 0.000 0.999 1.00 0.00
#> HSPC_675 2 0.000 0.997 0.00 1.00
#> HSPC_653 1 0.000 0.999 1.00 0.00
#> HSPC_659 1 0.000 0.999 1.00 0.00
#> HSPC_642 1 0.000 0.999 1.00 0.00
#> LT-HSC_175 1 0.000 0.999 1.00 0.00
#> LT-HSC_178 1 0.000 0.999 1.00 0.00
#> HSPC_685 2 0.584 0.838 0.14 0.86
#> HSPC_691 2 0.000 0.997 0.00 1.00
#> HSPC_715 2 0.000 0.997 0.00 1.00
#> LT-HSC_181 2 0.000 0.997 0.00 1.00
#> HSPC_686 1 0.000 0.999 1.00 0.00
#> HSPC_710 1 0.000 0.999 1.00 0.00
#> LT-HSC_182 1 0.000 0.999 1.00 0.00
#> HSPC_711 1 0.000 0.999 1.00 0.00
#> HSPC_688 1 0.000 0.999 1.00 0.00
#> HSPC_694 1 0.000 0.999 1.00 0.00
#> HSPC_712 1 0.000 0.999 1.00 0.00
#> HSPC_718 1 0.000 0.999 1.00 0.00
#> HSPC_713 2 0.000 0.997 0.00 1.00
#> LT-HSC_186 1 0.000 0.999 1.00 0.00
#> Prog_691 2 0.000 0.997 0.00 1.00
#> LT-HSC_189 1 0.000 0.999 1.00 0.00
#> HSPC_728 2 0.000 0.997 0.00 1.00
#> HSPC_741 1 0.000 0.999 1.00 0.00
#> HSPC_754 2 0.000 0.997 0.00 1.00
#> LT-HSC_196 1 0.000 0.999 1.00 0.00
#> HSPC_726 2 0.000 0.997 0.00 1.00
#> LT-HSC_199 1 0.000 0.999 1.00 0.00
#> Prog_741 1 0.000 0.999 1.00 0.00
#> Prog_742 1 0.000 0.999 1.00 0.00
#> Prog_755 2 0.000 0.997 0.00 1.00
#> LT-HSC_203 2 0.000 0.997 0.00 1.00
#> HSPC_793 2 0.000 0.997 0.00 1.00
#> HSPC_763 2 0.000 0.997 0.00 1.00
#> LT-HSC_209 1 0.000 0.999 1.00 0.00
#> HSPC_792 2 0.000 0.997 0.00 1.00
#> Prog_766 2 0.000 0.997 0.00 1.00
#> Prog_773 2 0.000 0.997 0.00 1.00
#> HSPC_811 2 0.000 0.997 0.00 1.00
#> HSPC_817 2 0.000 0.997 0.00 1.00
#> HSPC_823 2 0.000 0.997 0.00 1.00
#> HSPC_829 2 0.000 0.997 0.00 1.00
#> HSPC_805 2 0.000 0.997 0.00 1.00
#> HSPC_830 2 0.000 0.997 0.00 1.00
#> HSPC_850 1 0.000 0.999 1.00 0.00
cbind(get_classes(res, k = 3), get_membership(res, k = 3))
#> class entropy silhouette p1 p2 p3
#> HSPC_007 3 0.0000 0.960 0.00 0.00 1.00
#> HSPC_019 1 0.0000 0.988 1.00 0.00 0.00
#> HSPC_032 1 0.0000 0.988 1.00 0.00 0.00
#> HSPC_039 1 0.0892 0.983 0.98 0.00 0.02
#> HSPC_010 3 0.0000 0.960 0.00 0.00 1.00
#> HSPC_029 1 0.0892 0.983 0.98 0.00 0.02
#> LT-HSC_005 1 0.0892 0.983 0.98 0.00 0.02
#> HSPC_005 1 0.0892 0.983 0.98 0.00 0.02
#> Prog_034 1 0.0000 0.988 1.00 0.00 0.00
#> Prog_041 3 0.0892 0.964 0.00 0.02 0.98
#> LT-HSC_011 3 0.0000 0.960 0.00 0.00 1.00
#> Prog_005 3 0.0892 0.964 0.00 0.02 0.98
#> HSPC_059 1 0.0892 0.983 0.98 0.00 0.02
#> LT-HSC_019 1 0.0000 0.988 1.00 0.00 0.00
#> Prog_060 3 0.0892 0.964 0.00 0.02 0.98
#> HSPC_091 2 0.0000 0.988 0.00 1.00 0.00
#> LT-HSC_025 2 0.0000 0.988 0.00 1.00 0.00
#> HSPC_092 2 0.0000 0.988 0.00 1.00 0.00
#> HSPC_116 1 0.0000 0.988 1.00 0.00 0.00
#> HSPC_086 1 0.0892 0.983 0.98 0.00 0.02
#> HSPC_093 1 0.0000 0.988 1.00 0.00 0.00
#> HSPC_112 1 0.0000 0.988 1.00 0.00 0.00
#> HSPC_124 1 0.0000 0.988 1.00 0.00 0.00
#> LT-HSC_029 2 0.0000 0.988 0.00 1.00 0.00
#> LT-HSC_030 2 0.0000 0.988 0.00 1.00 0.00
#> Prog_121 3 0.0892 0.964 0.00 0.02 0.98
#> Prog_104 1 0.0000 0.988 1.00 0.00 0.00
#> Prog_086 2 0.0000 0.988 0.00 1.00 0.00
#> LT-HSC_035 2 0.0000 0.988 0.00 1.00 0.00
#> HSPC_129 1 0.0000 0.988 1.00 0.00 0.00
#> HSPC_160 1 0.0892 0.983 0.98 0.00 0.02
#> HSPC_137 1 0.0000 0.988 1.00 0.00 0.00
#> HSPC_150 1 0.0000 0.988 1.00 0.00 0.00
#> Prog_164 3 0.3340 0.872 0.00 0.12 0.88
#> Prog_147 1 0.0892 0.983 0.98 0.00 0.02
#> LT-HSC_047 3 0.0892 0.964 0.00 0.02 0.98
#> Prog_138 1 0.0000 0.988 1.00 0.00 0.00
#> Prog_156 2 0.0000 0.988 0.00 1.00 0.00
#> HSPC_188 1 0.0000 0.988 1.00 0.00 0.00
#> HSPC_194 1 0.0000 0.988 1.00 0.00 0.00
#> HSPC_201 1 0.0000 0.988 1.00 0.00 0.00
#> HSPC_184 2 0.0000 0.988 0.00 1.00 0.00
#> HSPC_197 1 0.0000 0.988 1.00 0.00 0.00
#> HSPC_209 1 0.0000 0.988 1.00 0.00 0.00
#> LT-HSC_053 1 0.0892 0.983 0.98 0.00 0.02
#> Prog_181 1 0.0000 0.988 1.00 0.00 0.00
#> Prog_169 1 0.0892 0.983 0.98 0.00 0.02
#> Prog_202 3 0.0892 0.964 0.00 0.02 0.98
#> LT-HSC_059 2 0.0000 0.988 0.00 1.00 0.00
#> Prog_198 1 0.0892 0.983 0.98 0.00 0.02
#> Prog_174 3 0.0892 0.964 0.00 0.02 0.98
#> HSPC_217 2 0.0000 0.988 0.00 1.00 0.00
#> HSPC_241 1 0.0000 0.988 1.00 0.00 0.00
#> LT-HSC_061 2 0.0000 0.988 0.00 1.00 0.00
#> HSPC_226 1 0.0892 0.983 0.98 0.00 0.02
#> HSPC_238 2 0.0000 0.988 0.00 1.00 0.00
#> HSPC_234 1 0.0000 0.988 1.00 0.00 0.00
#> HSPC_252 3 0.0000 0.960 0.00 0.00 1.00
#> LT-HSC_067 3 0.0892 0.964 0.00 0.02 0.98
#> Prog_219 3 0.0892 0.964 0.00 0.02 0.98
#> Prog_220 3 0.0892 0.964 0.00 0.02 0.98
#> Prog_251 2 0.0000 0.988 0.00 1.00 0.00
#> HSPC_260 1 0.0892 0.983 0.98 0.00 0.02
#> HSPC_272 1 0.0000 0.988 1.00 0.00 0.00
#> HSPC_284 1 0.0000 0.988 1.00 0.00 0.00
#> HSPC_273 1 0.0000 0.988 1.00 0.00 0.00
#> HSPC_262 2 0.0000 0.988 0.00 1.00 0.00
#> LT-HSC_079 1 0.0892 0.983 0.98 0.00 0.02
#> LT-HSC_083 2 0.0892 0.965 0.02 0.98 0.00
#> Prog_257 3 0.0892 0.964 0.00 0.02 0.98
#> HSPC_319 2 0.0000 0.988 0.00 1.00 0.00
#> LT-HSC_087 2 0.0000 0.988 0.00 1.00 0.00
#> HSPC_311 2 0.0000 0.988 0.00 1.00 0.00
#> Prog_302 2 0.0000 0.988 0.00 1.00 0.00
#> LT-HSC_092 2 0.0000 0.988 0.00 1.00 0.00
#> Prog_317 2 0.0000 0.988 0.00 1.00 0.00
#> HSPC_355 3 0.0892 0.964 0.00 0.02 0.98
#> LT-HSC_097 2 0.0000 0.988 0.00 1.00 0.00
#> HSPC_357 1 0.0000 0.988 1.00 0.00 0.00
#> HSPC_369 1 0.0000 0.988 1.00 0.00 0.00
#> HSPC_375 1 0.0000 0.988 1.00 0.00 0.00
#> HSPC_340 3 0.4291 0.798 0.00 0.18 0.82
#> HSPC_347 1 0.0892 0.983 0.98 0.00 0.02
#> HSPC_366 3 0.0000 0.960 0.00 0.00 1.00
#> HSPC_378 2 0.5216 0.632 0.00 0.74 0.26
#> Prog_344 1 0.0892 0.983 0.98 0.00 0.02
#> LT-HSC_104 2 0.0000 0.988 0.00 1.00 0.00
#> Prog_347 3 0.0892 0.964 0.00 0.02 0.98
#> Prog_365 3 0.0892 0.964 0.00 0.02 0.98
#> Prog_348 2 0.0892 0.965 0.02 0.98 0.00
#> HSPC_385 1 0.0000 0.988 1.00 0.00 0.00
#> HSPC_397 1 0.0000 0.988 1.00 0.00 0.00
#> HSPC_379 2 0.0892 0.965 0.02 0.98 0.00
#> HSPC_381 1 0.0892 0.983 0.98 0.00 0.02
#> HSPC_394 1 0.0000 0.988 1.00 0.00 0.00
#> HSPC_401 1 0.0000 0.988 1.00 0.00 0.00
#> HSPC_414 1 0.0000 0.988 1.00 0.00 0.00
#> HSPC_384 1 0.0892 0.983 0.98 0.00 0.02
#> Prog_391 3 0.0000 0.960 0.00 0.00 1.00
#> Prog_400 1 0.0000 0.988 1.00 0.00 0.00
#> HSPC_433 2 0.0000 0.988 0.00 1.00 0.00
#> HSPC_439 2 0.0000 0.988 0.00 1.00 0.00
#> HSPC_445 2 0.0000 0.988 0.00 1.00 0.00
#> HSPC_434 3 0.0000 0.960 0.00 0.00 1.00
#> HSPC_452 1 0.0000 0.988 1.00 0.00 0.00
#> HSPC_458 1 0.0000 0.988 1.00 0.00 0.00
#> HSPC_464 1 0.0000 0.988 1.00 0.00 0.00
#> HSPC_428 2 0.0000 0.988 0.00 1.00 0.00
#> HSPC_429 1 0.0000 0.988 1.00 0.00 0.00
#> HSPC_437 1 0.4002 0.807 0.84 0.16 0.00
#> HSPC_438 3 0.0000 0.960 0.00 0.00 1.00
#> Prog_452 2 0.0000 0.988 0.00 1.00 0.00
#> Prog_442 1 0.0892 0.983 0.98 0.00 0.02
#> LT-HSC_118 1 0.0892 0.983 0.98 0.00 0.02
#> LT-HSC_119 3 0.0892 0.964 0.00 0.02 0.98
#> HSPC_487 2 0.0000 0.988 0.00 1.00 0.00
#> LT-HSC_121 3 0.0000 0.960 0.00 0.00 1.00
#> HSPC_476 1 0.0000 0.988 1.00 0.00 0.00
#> HSPC_484 1 0.0000 0.988 1.00 0.00 0.00
#> LT-HSC_127 2 0.0000 0.988 0.00 1.00 0.00
#> LT-HSC_129 1 0.0892 0.983 0.98 0.00 0.02
#> Prog_498 3 0.5216 0.675 0.00 0.26 0.74
#> HSPC_529 1 0.0000 0.988 1.00 0.00 0.00
#> LT-HSC_133 2 0.0000 0.988 0.00 1.00 0.00
#> HSPC_536 1 0.0000 0.988 1.00 0.00 0.00
#> HSPC_542 1 0.0000 0.988 1.00 0.00 0.00
#> HSPC_519 1 0.0892 0.983 0.98 0.00 0.02
#> HSPC_513 2 0.0000 0.988 0.00 1.00 0.00
#> LT-HSC_141 1 0.0000 0.988 1.00 0.00 0.00
#> Prog_538 2 0.0000 0.988 0.00 1.00 0.00
#> HSPC_583 1 0.0000 0.988 1.00 0.00 0.00
#> HSPC_561 1 0.0000 0.988 1.00 0.00 0.00
#> HSPC_581 1 0.0892 0.983 0.98 0.00 0.02
#> HSPC_587 1 0.0892 0.983 0.98 0.00 0.02
#> HSPC_564 1 0.0892 0.983 0.98 0.00 0.02
#> HSPC_570 1 0.0892 0.983 0.98 0.00 0.02
#> HSPC_588 2 0.0000 0.988 0.00 1.00 0.00
#> HSPC_558 1 0.0892 0.983 0.98 0.00 0.02
#> LT-HSC_154 1 0.0892 0.983 0.98 0.00 0.02
#> Prog_563 3 0.0892 0.964 0.00 0.02 0.98
#> LT-HSC_155 1 0.0000 0.988 1.00 0.00 0.00
#> HSPC_619 1 0.0892 0.983 0.98 0.00 0.02
#> HSPC_632 1 0.0892 0.983 0.98 0.00 0.02
#> HSPC_621 1 0.0000 0.988 1.00 0.00 0.00
#> HSPC_616 1 0.0000 0.988 1.00 0.00 0.00
#> HSPC_622 1 0.0000 0.988 1.00 0.00 0.00
#> HSPC_605 3 0.0000 0.960 0.00 0.00 1.00
#> HSPC_611 1 0.0892 0.983 0.98 0.00 0.02
#> Prog_601 1 0.0892 0.983 0.98 0.00 0.02
#> Prog_636 3 0.0000 0.960 0.00 0.00 1.00
#> HSPC_655 2 0.1529 0.948 0.00 0.96 0.04
#> HSPC_650 1 0.0892 0.983 0.98 0.00 0.02
#> HSPC_675 2 0.0000 0.988 0.00 1.00 0.00
#> HSPC_653 1 0.0000 0.988 1.00 0.00 0.00
#> HSPC_659 1 0.0892 0.983 0.98 0.00 0.02
#> HSPC_642 1 0.6045 0.418 0.62 0.00 0.38
#> LT-HSC_175 1 0.0000 0.988 1.00 0.00 0.00
#> LT-HSC_178 1 0.0892 0.983 0.98 0.00 0.02
#> HSPC_685 3 0.2414 0.929 0.04 0.02 0.94
#> HSPC_691 2 0.0000 0.988 0.00 1.00 0.00
#> HSPC_715 2 0.5016 0.668 0.00 0.76 0.24
#> LT-HSC_181 2 0.0000 0.988 0.00 1.00 0.00
#> HSPC_686 1 0.0000 0.988 1.00 0.00 0.00
#> HSPC_710 1 0.0000 0.988 1.00 0.00 0.00
#> LT-HSC_182 3 0.0000 0.960 0.00 0.00 1.00
#> HSPC_711 1 0.0000 0.988 1.00 0.00 0.00
#> HSPC_688 1 0.0000 0.988 1.00 0.00 0.00
#> HSPC_694 1 0.0000 0.988 1.00 0.00 0.00
#> HSPC_712 1 0.0000 0.988 1.00 0.00 0.00
#> HSPC_718 1 0.0000 0.988 1.00 0.00 0.00
#> HSPC_713 2 0.0000 0.988 0.00 1.00 0.00
#> LT-HSC_186 1 0.0000 0.988 1.00 0.00 0.00
#> Prog_691 3 0.2066 0.933 0.00 0.06 0.94
#> LT-HSC_189 1 0.0000 0.988 1.00 0.00 0.00
#> HSPC_728 3 0.0892 0.964 0.00 0.02 0.98
#> HSPC_741 1 0.0000 0.988 1.00 0.00 0.00
#> HSPC_754 3 0.6302 0.121 0.00 0.48 0.52
#> LT-HSC_196 1 0.0000 0.988 1.00 0.00 0.00
#> HSPC_726 3 0.0000 0.960 0.00 0.00 1.00
#> LT-HSC_199 1 0.0892 0.983 0.98 0.00 0.02
#> Prog_741 3 0.0000 0.960 0.00 0.00 1.00
#> Prog_742 3 0.0000 0.960 0.00 0.00 1.00
#> Prog_755 3 0.0892 0.964 0.00 0.02 0.98
#> LT-HSC_203 3 0.0892 0.964 0.00 0.02 0.98
#> HSPC_793 2 0.0000 0.988 0.00 1.00 0.00
#> HSPC_763 2 0.0000 0.988 0.00 1.00 0.00
#> LT-HSC_209 1 0.0892 0.983 0.98 0.00 0.02
#> HSPC_792 3 0.0000 0.960 0.00 0.00 1.00
#> Prog_766 2 0.0000 0.988 0.00 1.00 0.00
#> Prog_773 2 0.0000 0.988 0.00 1.00 0.00
#> HSPC_811 2 0.0000 0.988 0.00 1.00 0.00
#> HSPC_817 2 0.0000 0.988 0.00 1.00 0.00
#> HSPC_823 2 0.0000 0.988 0.00 1.00 0.00
#> HSPC_829 3 0.0892 0.964 0.00 0.02 0.98
#> HSPC_805 2 0.0000 0.988 0.00 1.00 0.00
#> HSPC_830 2 0.0000 0.988 0.00 1.00 0.00
#> HSPC_850 1 0.0000 0.988 1.00 0.00 0.00
cbind(get_classes(res, k = 4), get_membership(res, k = 4))
#> class entropy silhouette p1 p2 p3 p4
#> HSPC_007 3 0.0000 0.973 0.00 0.00 1.00 0.00
#> HSPC_019 4 0.4907 0.321 0.42 0.00 0.00 0.58
#> HSPC_032 1 0.0000 0.980 1.00 0.00 0.00 0.00
#> HSPC_039 4 0.0000 0.949 0.00 0.00 0.00 1.00
#> HSPC_010 4 0.0000 0.949 0.00 0.00 0.00 1.00
#> HSPC_029 4 0.0000 0.949 0.00 0.00 0.00 1.00
#> LT-HSC_005 4 0.0000 0.949 0.00 0.00 0.00 1.00
#> HSPC_005 4 0.0000 0.949 0.00 0.00 0.00 1.00
#> Prog_034 1 0.0000 0.980 1.00 0.00 0.00 0.00
#> Prog_041 3 0.0000 0.973 0.00 0.00 1.00 0.00
#> LT-HSC_011 3 0.0000 0.973 0.00 0.00 1.00 0.00
#> Prog_005 3 0.0000 0.973 0.00 0.00 1.00 0.00
#> HSPC_059 4 0.0000 0.949 0.00 0.00 0.00 1.00
#> LT-HSC_019 1 0.0000 0.980 1.00 0.00 0.00 0.00
#> Prog_060 3 0.0000 0.973 0.00 0.00 1.00 0.00
#> HSPC_091 2 0.0000 0.971 0.00 1.00 0.00 0.00
#> LT-HSC_025 2 0.0000 0.971 0.00 1.00 0.00 0.00
#> HSPC_092 2 0.0000 0.971 0.00 1.00 0.00 0.00
#> HSPC_116 1 0.0000 0.980 1.00 0.00 0.00 0.00
#> HSPC_086 4 0.0000 0.949 0.00 0.00 0.00 1.00
#> HSPC_093 1 0.0707 0.962 0.98 0.00 0.00 0.02
#> HSPC_112 1 0.0000 0.980 1.00 0.00 0.00 0.00
#> HSPC_124 1 0.0000 0.980 1.00 0.00 0.00 0.00
#> LT-HSC_029 2 0.0000 0.971 0.00 1.00 0.00 0.00
#> LT-HSC_030 2 0.0000 0.971 0.00 1.00 0.00 0.00
#> Prog_121 3 0.0000 0.973 0.00 0.00 1.00 0.00
#> Prog_104 1 0.0000 0.980 1.00 0.00 0.00 0.00
#> Prog_086 2 0.0000 0.971 0.00 1.00 0.00 0.00
#> LT-HSC_035 2 0.0000 0.971 0.00 1.00 0.00 0.00
#> HSPC_129 1 0.0000 0.980 1.00 0.00 0.00 0.00
#> HSPC_160 4 0.0000 0.949 0.00 0.00 0.00 1.00
#> HSPC_137 1 0.0000 0.980 1.00 0.00 0.00 0.00
#> HSPC_150 1 0.0000 0.980 1.00 0.00 0.00 0.00
#> Prog_164 3 0.0000 0.973 0.00 0.00 1.00 0.00
#> Prog_147 4 0.0000 0.949 0.00 0.00 0.00 1.00
#> LT-HSC_047 3 0.0000 0.973 0.00 0.00 1.00 0.00
#> Prog_138 1 0.0000 0.980 1.00 0.00 0.00 0.00
#> Prog_156 2 0.0000 0.971 0.00 1.00 0.00 0.00
#> HSPC_188 1 0.3400 0.769 0.82 0.00 0.00 0.18
#> HSPC_194 1 0.0000 0.980 1.00 0.00 0.00 0.00
#> HSPC_201 4 0.2011 0.887 0.08 0.00 0.00 0.92
#> HSPC_184 2 0.0000 0.971 0.00 1.00 0.00 0.00
#> HSPC_197 1 0.0000 0.980 1.00 0.00 0.00 0.00
#> HSPC_209 4 0.4134 0.667 0.26 0.00 0.00 0.74
#> LT-HSC_053 4 0.0000 0.949 0.00 0.00 0.00 1.00
#> Prog_181 1 0.3801 0.713 0.78 0.00 0.00 0.22
#> Prog_169 4 0.0000 0.949 0.00 0.00 0.00 1.00
#> Prog_202 3 0.0000 0.973 0.00 0.00 1.00 0.00
#> LT-HSC_059 2 0.3801 0.722 0.00 0.78 0.22 0.00
#> Prog_198 4 0.0000 0.949 0.00 0.00 0.00 1.00
#> Prog_174 3 0.0000 0.973 0.00 0.00 1.00 0.00
#> HSPC_217 2 0.0000 0.971 0.00 1.00 0.00 0.00
#> HSPC_241 1 0.0000 0.980 1.00 0.00 0.00 0.00
#> LT-HSC_061 2 0.0000 0.971 0.00 1.00 0.00 0.00
#> HSPC_226 4 0.0000 0.949 0.00 0.00 0.00 1.00
#> HSPC_238 2 0.4277 0.613 0.00 0.72 0.28 0.00
#> HSPC_234 4 0.2345 0.869 0.10 0.00 0.00 0.90
#> HSPC_252 4 0.0000 0.949 0.00 0.00 0.00 1.00
#> LT-HSC_067 3 0.0000 0.973 0.00 0.00 1.00 0.00
#> Prog_219 3 0.0000 0.973 0.00 0.00 1.00 0.00
#> Prog_220 3 0.0000 0.973 0.00 0.00 1.00 0.00
#> Prog_251 3 0.0000 0.973 0.00 0.00 1.00 0.00
#> HSPC_260 4 0.0000 0.949 0.00 0.00 0.00 1.00
#> HSPC_272 4 0.1211 0.919 0.04 0.00 0.00 0.96
#> HSPC_284 1 0.0000 0.980 1.00 0.00 0.00 0.00
#> HSPC_273 1 0.4522 0.502 0.68 0.00 0.00 0.32
#> HSPC_262 2 0.0000 0.971 0.00 1.00 0.00 0.00
#> LT-HSC_079 4 0.0000 0.949 0.00 0.00 0.00 1.00
#> LT-HSC_083 1 0.2921 0.825 0.86 0.14 0.00 0.00
#> Prog_257 3 0.0000 0.973 0.00 0.00 1.00 0.00
#> HSPC_319 2 0.0000 0.971 0.00 1.00 0.00 0.00
#> LT-HSC_087 2 0.0000 0.971 0.00 1.00 0.00 0.00
#> HSPC_311 2 0.0000 0.971 0.00 1.00 0.00 0.00
#> Prog_302 2 0.0000 0.971 0.00 1.00 0.00 0.00
#> LT-HSC_092 2 0.0000 0.971 0.00 1.00 0.00 0.00
#> Prog_317 2 0.0000 0.971 0.00 1.00 0.00 0.00
#> HSPC_355 3 0.0000 0.973 0.00 0.00 1.00 0.00
#> LT-HSC_097 2 0.0000 0.971 0.00 1.00 0.00 0.00
#> HSPC_357 1 0.0000 0.980 1.00 0.00 0.00 0.00
#> HSPC_369 1 0.1211 0.944 0.96 0.00 0.00 0.04
#> HSPC_375 1 0.0000 0.980 1.00 0.00 0.00 0.00
#> HSPC_340 3 0.0000 0.973 0.00 0.00 1.00 0.00
#> HSPC_347 4 0.0000 0.949 0.00 0.00 0.00 1.00
#> HSPC_366 3 0.0000 0.973 0.00 0.00 1.00 0.00
#> HSPC_378 3 0.2011 0.899 0.00 0.08 0.92 0.00
#> Prog_344 4 0.0000 0.949 0.00 0.00 0.00 1.00
#> LT-HSC_104 2 0.0000 0.971 0.00 1.00 0.00 0.00
#> Prog_347 3 0.0000 0.973 0.00 0.00 1.00 0.00
#> Prog_365 3 0.0000 0.973 0.00 0.00 1.00 0.00
#> Prog_348 2 0.4948 0.210 0.44 0.56 0.00 0.00
#> HSPC_385 1 0.0000 0.980 1.00 0.00 0.00 0.00
#> HSPC_397 1 0.0000 0.980 1.00 0.00 0.00 0.00
#> HSPC_379 2 0.0000 0.971 0.00 1.00 0.00 0.00
#> HSPC_381 4 0.0000 0.949 0.00 0.00 0.00 1.00
#> HSPC_394 1 0.0000 0.980 1.00 0.00 0.00 0.00
#> HSPC_401 1 0.0000 0.980 1.00 0.00 0.00 0.00
#> HSPC_414 4 0.4994 0.118 0.48 0.00 0.00 0.52
#> HSPC_384 4 0.0000 0.949 0.00 0.00 0.00 1.00
#> Prog_391 3 0.0707 0.956 0.00 0.00 0.98 0.02
#> Prog_400 1 0.0000 0.980 1.00 0.00 0.00 0.00
#> HSPC_433 2 0.0000 0.971 0.00 1.00 0.00 0.00
#> HSPC_439 2 0.0000 0.971 0.00 1.00 0.00 0.00
#> HSPC_445 2 0.0000 0.971 0.00 1.00 0.00 0.00
#> HSPC_434 4 0.0000 0.949 0.00 0.00 0.00 1.00
#> HSPC_452 1 0.0000 0.980 1.00 0.00 0.00 0.00
#> HSPC_458 4 0.3172 0.807 0.16 0.00 0.00 0.84
#> HSPC_464 4 0.3975 0.701 0.24 0.00 0.00 0.76
#> HSPC_428 2 0.0000 0.971 0.00 1.00 0.00 0.00
#> HSPC_429 1 0.0000 0.980 1.00 0.00 0.00 0.00
#> HSPC_437 1 0.0000 0.980 1.00 0.00 0.00 0.00
#> HSPC_438 3 0.0000 0.973 0.00 0.00 1.00 0.00
#> Prog_452 2 0.2647 0.855 0.00 0.88 0.12 0.00
#> Prog_442 4 0.0000 0.949 0.00 0.00 0.00 1.00
#> LT-HSC_118 4 0.0000 0.949 0.00 0.00 0.00 1.00
#> LT-HSC_119 3 0.0000 0.973 0.00 0.00 1.00 0.00
#> HSPC_487 2 0.0000 0.971 0.00 1.00 0.00 0.00
#> LT-HSC_121 4 0.0000 0.949 0.00 0.00 0.00 1.00
#> HSPC_476 1 0.0000 0.980 1.00 0.00 0.00 0.00
#> HSPC_484 1 0.1637 0.922 0.94 0.00 0.00 0.06
#> LT-HSC_127 2 0.0000 0.971 0.00 1.00 0.00 0.00
#> LT-HSC_129 4 0.0000 0.949 0.00 0.00 0.00 1.00
#> Prog_498 3 0.3400 0.773 0.00 0.18 0.82 0.00
#> HSPC_529 1 0.0000 0.980 1.00 0.00 0.00 0.00
#> LT-HSC_133 2 0.0000 0.971 0.00 1.00 0.00 0.00
#> HSPC_536 1 0.0000 0.980 1.00 0.00 0.00 0.00
#> HSPC_542 1 0.0000 0.980 1.00 0.00 0.00 0.00
#> HSPC_519 4 0.0000 0.949 0.00 0.00 0.00 1.00
#> HSPC_513 2 0.0000 0.971 0.00 1.00 0.00 0.00
#> LT-HSC_141 1 0.0000 0.980 1.00 0.00 0.00 0.00
#> Prog_538 2 0.0000 0.971 0.00 1.00 0.00 0.00
#> HSPC_583 1 0.0000 0.980 1.00 0.00 0.00 0.00
#> HSPC_561 4 0.4277 0.637 0.28 0.00 0.00 0.72
#> HSPC_581 4 0.0000 0.949 0.00 0.00 0.00 1.00
#> HSPC_587 4 0.0000 0.949 0.00 0.00 0.00 1.00
#> HSPC_564 4 0.0000 0.949 0.00 0.00 0.00 1.00
#> HSPC_570 4 0.0000 0.949 0.00 0.00 0.00 1.00
#> HSPC_588 2 0.0000 0.971 0.00 1.00 0.00 0.00
#> HSPC_558 4 0.0000 0.949 0.00 0.00 0.00 1.00
#> LT-HSC_154 4 0.0000 0.949 0.00 0.00 0.00 1.00
#> Prog_563 3 0.0000 0.973 0.00 0.00 1.00 0.00
#> LT-HSC_155 1 0.0000 0.980 1.00 0.00 0.00 0.00
#> HSPC_619 4 0.0000 0.949 0.00 0.00 0.00 1.00
#> HSPC_632 4 0.0000 0.949 0.00 0.00 0.00 1.00
#> HSPC_621 1 0.0000 0.980 1.00 0.00 0.00 0.00
#> HSPC_616 1 0.0000 0.980 1.00 0.00 0.00 0.00
#> HSPC_622 1 0.0000 0.980 1.00 0.00 0.00 0.00
#> HSPC_605 4 0.0000 0.949 0.00 0.00 0.00 1.00
#> HSPC_611 4 0.0000 0.949 0.00 0.00 0.00 1.00
#> Prog_601 4 0.0000 0.949 0.00 0.00 0.00 1.00
#> Prog_636 3 0.4977 0.156 0.00 0.00 0.54 0.46
#> HSPC_655 2 0.3400 0.781 0.00 0.82 0.18 0.00
#> HSPC_650 4 0.0000 0.949 0.00 0.00 0.00 1.00
#> HSPC_675 2 0.0000 0.971 0.00 1.00 0.00 0.00
#> HSPC_653 1 0.0000 0.980 1.00 0.00 0.00 0.00
#> HSPC_659 4 0.0000 0.949 0.00 0.00 0.00 1.00
#> HSPC_642 4 0.0000 0.949 0.00 0.00 0.00 1.00
#> LT-HSC_175 1 0.0000 0.980 1.00 0.00 0.00 0.00
#> LT-HSC_178 4 0.0000 0.949 0.00 0.00 0.00 1.00
#> HSPC_685 3 0.1411 0.943 0.02 0.02 0.96 0.00
#> HSPC_691 2 0.0000 0.971 0.00 1.00 0.00 0.00
#> HSPC_715 3 0.0000 0.973 0.00 0.00 1.00 0.00
#> LT-HSC_181 2 0.0000 0.971 0.00 1.00 0.00 0.00
#> HSPC_686 1 0.0000 0.980 1.00 0.00 0.00 0.00
#> HSPC_710 1 0.0000 0.980 1.00 0.00 0.00 0.00
#> LT-HSC_182 4 0.0000 0.949 0.00 0.00 0.00 1.00
#> HSPC_711 1 0.0000 0.980 1.00 0.00 0.00 0.00
#> HSPC_688 1 0.0000 0.980 1.00 0.00 0.00 0.00
#> HSPC_694 1 0.0000 0.980 1.00 0.00 0.00 0.00
#> HSPC_712 1 0.0000 0.980 1.00 0.00 0.00 0.00
#> HSPC_718 1 0.0000 0.980 1.00 0.00 0.00 0.00
#> HSPC_713 2 0.0000 0.971 0.00 1.00 0.00 0.00
#> LT-HSC_186 1 0.0000 0.980 1.00 0.00 0.00 0.00
#> Prog_691 3 0.0000 0.973 0.00 0.00 1.00 0.00
#> LT-HSC_189 1 0.0000 0.980 1.00 0.00 0.00 0.00
#> HSPC_728 3 0.0000 0.973 0.00 0.00 1.00 0.00
#> HSPC_741 4 0.4855 0.382 0.40 0.00 0.00 0.60
#> HSPC_754 3 0.3172 0.801 0.00 0.16 0.84 0.00
#> LT-HSC_196 1 0.0000 0.980 1.00 0.00 0.00 0.00
#> HSPC_726 3 0.0000 0.973 0.00 0.00 1.00 0.00
#> LT-HSC_199 4 0.0707 0.935 0.02 0.00 0.00 0.98
#> Prog_741 4 0.0707 0.933 0.00 0.00 0.02 0.98
#> Prog_742 4 0.0707 0.933 0.00 0.00 0.02 0.98
#> Prog_755 3 0.0000 0.973 0.00 0.00 1.00 0.00
#> LT-HSC_203 3 0.0000 0.973 0.00 0.00 1.00 0.00
#> HSPC_793 2 0.0000 0.971 0.00 1.00 0.00 0.00
#> HSPC_763 2 0.0000 0.971 0.00 1.00 0.00 0.00
#> LT-HSC_209 4 0.0000 0.949 0.00 0.00 0.00 1.00
#> HSPC_792 3 0.0000 0.973 0.00 0.00 1.00 0.00
#> Prog_766 2 0.0000 0.971 0.00 1.00 0.00 0.00
#> Prog_773 2 0.2011 0.897 0.00 0.92 0.08 0.00
#> HSPC_811 2 0.0000 0.971 0.00 1.00 0.00 0.00
#> HSPC_817 2 0.0000 0.971 0.00 1.00 0.00 0.00
#> HSPC_823 2 0.0000 0.971 0.00 1.00 0.00 0.00
#> HSPC_829 3 0.0000 0.973 0.00 0.00 1.00 0.00
#> HSPC_805 2 0.0000 0.971 0.00 1.00 0.00 0.00
#> HSPC_830 2 0.0000 0.971 0.00 1.00 0.00 0.00
#> HSPC_850 1 0.0000 0.980 1.00 0.00 0.00 0.00
Heatmaps for the consensus matrix. It visualizes the probability of two samples to be in a same group.
consensus_heatmap(res, k = 2)
consensus_heatmap(res, k = 3)
consensus_heatmap(res, k = 4)
Heatmaps for the membership of samples in all partitions to see how consistent they are:
membership_heatmap(res, k = 2)
membership_heatmap(res, k = 3)
membership_heatmap(res, k = 4)
As soon as the classes for columns are determined, the signatures that are significantly different between subgroups can be looked for. Following are the heatmaps for signatures.
Signature heatmaps where rows are scaled:
Signature heatmaps where rows are not scaled:
get_signatures(res, k = 2, scale_rows = FALSE)
get_signatures(res, k = 3, scale_rows = FALSE)
get_signatures(res, k = 4, scale_rows = FALSE)
Compare the overlap of signatures from different k:
compare_signatures(res)
get_signature() returns a data frame invisibly. To get the list of signatures, the function
call should be assigned to a variable explicitly. In following code, if plot argument is set
to FALSE, no heatmap is plotted while only the differential analysis is performed.
# code only for demonstration
tb = get_signature(res, k = ..., plot = FALSE)
An example of the output of tb is:
#> which_row fdr mean_1 mean_2 scaled_mean_1 scaled_mean_2 km
#> 1 38 0.042760348 8.373488 9.131774 -0.5533452 0.5164555 1
#> 2 40 0.018707592 7.106213 8.469186 -0.6173731 0.5762149 1
#> 3 55 0.019134737 10.221463 11.207825 -0.6159697 0.5749050 1
#> 4 59 0.006059896 5.921854 7.869574 -0.6899429 0.6439467 1
#> 5 60 0.018055526 8.928898 10.211722 -0.6204761 0.5791110 1
#> 6 98 0.009384629 15.714769 14.887706 0.6635654 -0.6193277 2
...
The columns in tb are:
which_row: row indices corresponding to the input matrix.fdr: FDR for the differential test. mean_x: The mean value in group x.scaled_mean_x: The mean value in group x after rows are scaled.km: Row groups if k-means clustering is applied to rows (which is done by automatically selecting number of clusters).If there are too many signatures, top_signatures = ... can be set to only show the
signatures with the highest FDRs:
# code only for demonstration
# e.g. to show the top 500 most significant rows
tb = get_signature(res, k = ..., top_signatures = 500)
If the signatures are defined as these which are uniquely high in current group, diff_method argument
can be set to "uniquely_high_in_one_group":
# code only for demonstration
tb = get_signature(res, k = ..., diff_method = "uniquely_high_in_one_group")
UMAP plot which shows how samples are separated.
dimension_reduction(res, k = 2, method = "UMAP")
dimension_reduction(res, k = 3, method = "UMAP")
dimension_reduction(res, k = 4, method = "UMAP")
Following heatmap shows how subgroups are split when increasing k:
collect_classes(res)
If matrix rows can be associated to genes, consider to use functional_enrichment(res,
...) to perform function enrichment for the signature genes. See this vignette for more detailed explanations.
Parent node: Node021. Child nodes: Node01111-leaf , Node01112-leaf , Node01113-leaf , Node01121-leaf , Node01122-leaf , Node01211-leaf , Node01212-leaf , Node01213-leaf , Node01221-leaf , Node01222-leaf , Node01223-leaf , Node01311-leaf , Node01312-leaf , Node02111-leaf , Node02112-leaf , Node02121-leaf , Node02122-leaf .
The object with results only for a single top-value method and a single partitioning method can be extracted as:
res = res_rh["0211"]
A summary of res and all the functions that can be applied to it:
res
#> A 'ConsensusPartition' object with k = 2, 3, 4.
#> On a matrix with 15416 rows and 102 columns.
#> Top rows (1542) are extracted by 'ATC' method.
#> Subgroups are detected by 'skmeans' method.
#> Performed in total 150 partitions by row resampling.
#> Best k for subgroups seems to be 3.
#>
#> Following methods can be applied to this 'ConsensusPartition' object:
#> [1] "cola_report" "collect_classes" "collect_plots"
#> [4] "collect_stats" "colnames" "compare_partitions"
#> [7] "compare_signatures" "consensus_heatmap" "dimension_reduction"
#> [10] "functional_enrichment" "get_anno_col" "get_anno"
#> [13] "get_classes" "get_consensus" "get_matrix"
#> [16] "get_membership" "get_param" "get_signatures"
#> [19] "get_stats" "is_best_k" "is_stable_k"
#> [22] "membership_heatmap" "ncol" "nrow"
#> [25] "plot_ecdf" "predict_classes" "rownames"
#> [28] "select_partition_number" "show" "suggest_best_k"
#> [31] "test_to_known_factors" "top_rows_heatmap"
collect_plots() function collects all the plots made from res for all k (number of subgroups)
into one single page to provide an easy and fast comparison between different k.
collect_plots(res)
The plots are:
k and the heatmap of
predicted classes for each k.k.k.k.All the plots in panels can be made by individual functions and they are plotted later in this section.
select_partition_number() produces several plots showing different
statistics for choosing “optimized” k. There are following statistics:
k;k, the area increased is defined as \(A_k - A_{k-1}\).The detailed explanations of these statistics can be found in the cola vignette.
Generally speaking, higher 1-PAC score, higher mean silhouette score or higher
concordance corresponds to better partition. Rand index and Jaccard index
measure how similar the current partition is compared to partition with k-1.
If they are too similar, we won't accept k is better than k-1.
select_partition_number(res)
The numeric values for all these statistics can be obtained by get_stats().
get_stats(res)
#> k 1-PAC mean_silhouette concordance area_increased Rand Jaccard
#> 2 2 1.000 0.983 0.993 0.4918 0.507 0.507
#> 3 3 0.922 0.934 0.970 0.3018 0.814 0.646
#> 4 4 0.782 0.775 0.905 0.0613 0.908 0.763
suggest_best_k() suggests the best \(k\) based on these statistics. The rules are as follows:
suggest_best_k(res)
#> [1] 3
#> attr(,"optional")
#> [1] 2
There is also optional best \(k\) = 2 that is worth to check.
Following is the table of the partitions (You need to click the show/hide
code output link to see it). The membership matrix (columns with name p*)
is inferred by
clue::cl_consensus()
function with the SE method. Basically the value in the membership matrix
represents the probability to belong to a certain group. The finall subgroup
label for an item is determined with the group with highest probability it
belongs to.
In get_classes() function, the entropy is calculated from the membership
matrix and the silhouette score is calculated from the consensus matrix.
cbind(get_classes(res, k = 2), get_membership(res, k = 2))
#> class entropy silhouette p1 p2
#> HSPC_019 2 0.141 0.977 0.02 0.98
#> HSPC_032 1 0.000 0.987 1.00 0.00
#> HSPC_039 2 0.000 0.996 0.00 1.00
#> HSPC_029 2 0.000 0.996 0.00 1.00
#> LT-HSC_005 2 0.000 0.996 0.00 1.00
#> HSPC_005 2 0.000 0.996 0.00 1.00
#> Prog_034 2 0.000 0.996 0.00 1.00
#> HSPC_059 2 0.000 0.996 0.00 1.00
#> LT-HSC_019 2 0.000 0.996 0.00 1.00
#> HSPC_116 1 0.000 0.987 1.00 0.00
#> HSPC_086 2 0.000 0.996 0.00 1.00
#> HSPC_093 2 0.000 0.996 0.00 1.00
#> HSPC_112 1 0.000 0.987 1.00 0.00
#> HSPC_124 1 0.000 0.987 1.00 0.00
#> Prog_104 1 0.000 0.987 1.00 0.00
#> HSPC_129 1 0.000 0.987 1.00 0.00
#> HSPC_160 2 0.000 0.996 0.00 1.00
#> HSPC_137 1 0.000 0.987 1.00 0.00
#> HSPC_150 1 0.000 0.987 1.00 0.00
#> Prog_147 2 0.000 0.996 0.00 1.00
#> Prog_138 1 0.000 0.987 1.00 0.00
#> HSPC_188 1 0.722 0.750 0.80 0.20
#> HSPC_194 2 0.327 0.935 0.06 0.94
#> HSPC_201 2 0.000 0.996 0.00 1.00
#> HSPC_197 2 0.000 0.996 0.00 1.00
#> HSPC_209 2 0.000 0.996 0.00 1.00
#> LT-HSC_053 2 0.000 0.996 0.00 1.00
#> Prog_181 2 0.000 0.996 0.00 1.00
#> Prog_169 2 0.000 0.996 0.00 1.00
#> Prog_198 2 0.000 0.996 0.00 1.00
#> HSPC_241 2 0.000 0.996 0.00 1.00
#> HSPC_226 2 0.000 0.996 0.00 1.00
#> HSPC_234 2 0.000 0.996 0.00 1.00
#> HSPC_260 2 0.000 0.996 0.00 1.00
#> HSPC_272 2 0.000 0.996 0.00 1.00
#> HSPC_284 2 0.000 0.996 0.00 1.00
#> HSPC_273 2 0.000 0.996 0.00 1.00
#> LT-HSC_079 2 0.000 0.996 0.00 1.00
#> HSPC_357 1 0.000 0.987 1.00 0.00
#> HSPC_369 1 0.000 0.987 1.00 0.00
#> HSPC_375 1 0.000 0.987 1.00 0.00
#> HSPC_347 2 0.000 0.996 0.00 1.00
#> Prog_344 2 0.000 0.996 0.00 1.00
#> HSPC_385 1 0.000 0.987 1.00 0.00
#> HSPC_397 1 0.000 0.987 1.00 0.00
#> HSPC_381 2 0.000 0.996 0.00 1.00
#> HSPC_394 1 0.000 0.987 1.00 0.00
#> HSPC_401 1 0.000 0.987 1.00 0.00
#> HSPC_414 2 0.000 0.996 0.00 1.00
#> HSPC_384 2 0.000 0.996 0.00 1.00
#> Prog_400 1 0.000 0.987 1.00 0.00
#> HSPC_452 1 0.000 0.987 1.00 0.00
#> HSPC_458 2 0.000 0.996 0.00 1.00
#> HSPC_464 2 0.000 0.996 0.00 1.00
#> HSPC_429 1 0.000 0.987 1.00 0.00
#> HSPC_437 2 0.000 0.996 0.00 1.00
#> Prog_442 2 0.000 0.996 0.00 1.00
#> LT-HSC_118 2 0.000 0.996 0.00 1.00
#> HSPC_476 1 0.000 0.987 1.00 0.00
#> HSPC_484 2 0.000 0.996 0.00 1.00
#> LT-HSC_129 2 0.000 0.996 0.00 1.00
#> HSPC_529 1 0.000 0.987 1.00 0.00
#> HSPC_536 1 0.000 0.987 1.00 0.00
#> HSPC_542 1 0.000 0.987 1.00 0.00
#> HSPC_519 2 0.000 0.996 0.00 1.00
#> LT-HSC_141 1 0.000 0.987 1.00 0.00
#> HSPC_583 1 0.000 0.987 1.00 0.00
#> HSPC_561 1 0.925 0.490 0.66 0.34
#> HSPC_581 2 0.000 0.996 0.00 1.00
#> HSPC_587 2 0.000 0.996 0.00 1.00
#> HSPC_564 2 0.000 0.996 0.00 1.00
#> HSPC_570 2 0.000 0.996 0.00 1.00
#> HSPC_558 2 0.000 0.996 0.00 1.00
#> LT-HSC_154 2 0.000 0.996 0.00 1.00
#> LT-HSC_155 1 0.000 0.987 1.00 0.00
#> HSPC_619 2 0.000 0.996 0.00 1.00
#> HSPC_632 2 0.000 0.996 0.00 1.00
#> HSPC_621 1 0.000 0.987 1.00 0.00
#> HSPC_616 1 0.000 0.987 1.00 0.00
#> HSPC_622 1 0.000 0.987 1.00 0.00
#> HSPC_611 2 0.000 0.996 0.00 1.00
#> Prog_601 2 0.000 0.996 0.00 1.00
#> HSPC_650 2 0.000 0.996 0.00 1.00
#> HSPC_653 1 0.000 0.987 1.00 0.00
#> HSPC_659 2 0.000 0.996 0.00 1.00
#> HSPC_642 2 0.000 0.996 0.00 1.00
#> LT-HSC_175 1 0.000 0.987 1.00 0.00
#> LT-HSC_178 2 0.000 0.996 0.00 1.00
#> HSPC_686 2 0.000 0.996 0.00 1.00
#> HSPC_710 1 0.000 0.987 1.00 0.00
#> HSPC_711 1 0.000 0.987 1.00 0.00
#> HSPC_688 1 0.000 0.987 1.00 0.00
#> HSPC_694 1 0.000 0.987 1.00 0.00
#> HSPC_712 1 0.000 0.987 1.00 0.00
#> HSPC_718 1 0.000 0.987 1.00 0.00
#> LT-HSC_186 1 0.000 0.987 1.00 0.00
#> LT-HSC_189 1 0.000 0.987 1.00 0.00
#> HSPC_741 2 0.529 0.862 0.12 0.88
#> LT-HSC_196 1 0.000 0.987 1.00 0.00
#> LT-HSC_199 2 0.000 0.996 0.00 1.00
#> LT-HSC_209 2 0.000 0.996 0.00 1.00
#> HSPC_850 1 0.000 0.987 1.00 0.00
cbind(get_classes(res, k = 3), get_membership(res, k = 3))
#> class entropy silhouette p1 p2 p3
#> HSPC_019 2 0.6302 0.00981 0.00 0.52 0.48
#> HSPC_032 1 0.0000 0.99370 1.00 0.00 0.00
#> HSPC_039 2 0.0000 0.96247 0.00 1.00 0.00
#> HSPC_029 2 0.0000 0.96247 0.00 1.00 0.00
#> LT-HSC_005 2 0.0000 0.96247 0.00 1.00 0.00
#> HSPC_005 2 0.0000 0.96247 0.00 1.00 0.00
#> Prog_034 3 0.2066 0.90043 0.00 0.06 0.94
#> HSPC_059 3 0.1529 0.91015 0.00 0.04 0.96
#> LT-HSC_019 3 0.0000 0.92086 0.00 0.00 1.00
#> HSPC_116 1 0.0000 0.99370 1.00 0.00 0.00
#> HSPC_086 2 0.0000 0.96247 0.00 1.00 0.00
#> HSPC_093 2 0.5016 0.67452 0.00 0.76 0.24
#> HSPC_112 1 0.0000 0.99370 1.00 0.00 0.00
#> HSPC_124 1 0.0000 0.99370 1.00 0.00 0.00
#> Prog_104 1 0.0000 0.99370 1.00 0.00 0.00
#> HSPC_129 1 0.0000 0.99370 1.00 0.00 0.00
#> HSPC_160 3 0.4796 0.75437 0.00 0.22 0.78
#> HSPC_137 1 0.0000 0.99370 1.00 0.00 0.00
#> HSPC_150 1 0.0000 0.99370 1.00 0.00 0.00
#> Prog_147 2 0.0000 0.96247 0.00 1.00 0.00
#> Prog_138 1 0.0000 0.99370 1.00 0.00 0.00
#> HSPC_188 2 0.2959 0.85031 0.10 0.90 0.00
#> HSPC_194 3 0.0000 0.92086 0.00 0.00 1.00
#> HSPC_201 2 0.2537 0.89461 0.00 0.92 0.08
#> HSPC_197 3 0.0000 0.92086 0.00 0.00 1.00
#> HSPC_209 3 0.0000 0.92086 0.00 0.00 1.00
#> LT-HSC_053 2 0.0000 0.96247 0.00 1.00 0.00
#> Prog_181 3 0.0000 0.92086 0.00 0.00 1.00
#> Prog_169 2 0.0000 0.96247 0.00 1.00 0.00
#> Prog_198 2 0.0000 0.96247 0.00 1.00 0.00
#> HSPC_241 3 0.0000 0.92086 0.00 0.00 1.00
#> HSPC_226 3 0.1529 0.90987 0.00 0.04 0.96
#> HSPC_234 2 0.0000 0.96247 0.00 1.00 0.00
#> HSPC_260 3 0.2537 0.88974 0.00 0.08 0.92
#> HSPC_272 2 0.0000 0.96247 0.00 1.00 0.00
#> HSPC_284 3 0.0000 0.92086 0.00 0.00 1.00
#> HSPC_273 2 0.4291 0.76894 0.00 0.82 0.18
#> LT-HSC_079 3 0.5560 0.62775 0.00 0.30 0.70
#> HSPC_357 1 0.0000 0.99370 1.00 0.00 0.00
#> HSPC_369 1 0.0000 0.99370 1.00 0.00 0.00
#> HSPC_375 1 0.0000 0.99370 1.00 0.00 0.00
#> HSPC_347 2 0.0000 0.96247 0.00 1.00 0.00
#> Prog_344 2 0.0000 0.96247 0.00 1.00 0.00
#> HSPC_385 1 0.4555 0.74570 0.80 0.00 0.20
#> HSPC_397 1 0.0000 0.99370 1.00 0.00 0.00
#> HSPC_381 2 0.0000 0.96247 0.00 1.00 0.00
#> HSPC_394 1 0.0000 0.99370 1.00 0.00 0.00
#> HSPC_401 1 0.0000 0.99370 1.00 0.00 0.00
#> HSPC_414 3 0.4796 0.75799 0.00 0.22 0.78
#> HSPC_384 2 0.0000 0.96247 0.00 1.00 0.00
#> Prog_400 1 0.0000 0.99370 1.00 0.00 0.00
#> HSPC_452 1 0.0000 0.99370 1.00 0.00 0.00
#> HSPC_458 2 0.0000 0.96247 0.00 1.00 0.00
#> HSPC_464 2 0.0000 0.96247 0.00 1.00 0.00
#> HSPC_429 1 0.0000 0.99370 1.00 0.00 0.00
#> HSPC_437 3 0.0000 0.92086 0.00 0.00 1.00
#> Prog_442 2 0.0000 0.96247 0.00 1.00 0.00
#> LT-HSC_118 2 0.0000 0.96247 0.00 1.00 0.00
#> HSPC_476 1 0.1529 0.95455 0.96 0.00 0.04
#> HSPC_484 3 0.0000 0.92086 0.00 0.00 1.00
#> LT-HSC_129 2 0.0000 0.96247 0.00 1.00 0.00
#> HSPC_529 1 0.0000 0.99370 1.00 0.00 0.00
#> HSPC_536 1 0.0000 0.99370 1.00 0.00 0.00
#> HSPC_542 1 0.0000 0.99370 1.00 0.00 0.00
#> HSPC_519 2 0.0000 0.96247 0.00 1.00 0.00
#> LT-HSC_141 1 0.0000 0.99370 1.00 0.00 0.00
#> HSPC_583 1 0.0000 0.99370 1.00 0.00 0.00
#> HSPC_561 2 0.1529 0.92262 0.04 0.96 0.00
#> HSPC_581 2 0.0000 0.96247 0.00 1.00 0.00
#> HSPC_587 2 0.0000 0.96247 0.00 1.00 0.00
#> HSPC_564 2 0.0000 0.96247 0.00 1.00 0.00
#> HSPC_570 2 0.0000 0.96247 0.00 1.00 0.00
#> HSPC_558 2 0.0000 0.96247 0.00 1.00 0.00
#> LT-HSC_154 2 0.0000 0.96247 0.00 1.00 0.00
#> LT-HSC_155 1 0.0000 0.99370 1.00 0.00 0.00
#> HSPC_619 2 0.0000 0.96247 0.00 1.00 0.00
#> HSPC_632 2 0.0000 0.96247 0.00 1.00 0.00
#> HSPC_621 1 0.0000 0.99370 1.00 0.00 0.00
#> HSPC_616 1 0.0000 0.99370 1.00 0.00 0.00
#> HSPC_622 1 0.0000 0.99370 1.00 0.00 0.00
#> HSPC_611 2 0.0000 0.96247 0.00 1.00 0.00
#> Prog_601 2 0.0892 0.94656 0.00 0.98 0.02
#> HSPC_650 2 0.0000 0.96247 0.00 1.00 0.00
#> HSPC_653 1 0.0000 0.99370 1.00 0.00 0.00
#> HSPC_659 2 0.0000 0.96247 0.00 1.00 0.00
#> HSPC_642 2 0.0000 0.96247 0.00 1.00 0.00
#> LT-HSC_175 1 0.0000 0.99370 1.00 0.00 0.00
#> LT-HSC_178 2 0.0000 0.96247 0.00 1.00 0.00
#> HSPC_686 3 0.0000 0.92086 0.00 0.00 1.00
#> HSPC_710 1 0.0000 0.99370 1.00 0.00 0.00
#> HSPC_711 1 0.0000 0.99370 1.00 0.00 0.00
#> HSPC_688 1 0.0000 0.99370 1.00 0.00 0.00
#> HSPC_694 1 0.0000 0.99370 1.00 0.00 0.00
#> HSPC_712 1 0.0000 0.99370 1.00 0.00 0.00
#> HSPC_718 1 0.0000 0.99370 1.00 0.00 0.00
#> LT-HSC_186 1 0.0000 0.99370 1.00 0.00 0.00
#> LT-HSC_189 3 0.3686 0.80075 0.14 0.00 0.86
#> HSPC_741 2 0.5334 0.78557 0.06 0.82 0.12
#> LT-HSC_196 1 0.0000 0.99370 1.00 0.00 0.00
#> LT-HSC_199 3 0.5397 0.66375 0.00 0.28 0.72
#> LT-HSC_209 2 0.3340 0.84762 0.00 0.88 0.12
#> HSPC_850 1 0.0000 0.99370 1.00 0.00 0.00
cbind(get_classes(res, k = 4), get_membership(res, k = 4))
#> class entropy silhouette p1 p2 p3 p4
#> HSPC_019 4 0.7473 0.4807 0.02 0.22 0.18 0.58
#> HSPC_032 1 0.0000 0.9630 1.00 0.00 0.00 0.00
#> HSPC_039 2 0.0000 0.8825 0.00 1.00 0.00 0.00
#> HSPC_029 2 0.0707 0.8715 0.00 0.98 0.00 0.02
#> LT-HSC_005 2 0.0000 0.8825 0.00 1.00 0.00 0.00
#> HSPC_005 2 0.0000 0.8825 0.00 1.00 0.00 0.00
#> Prog_034 3 0.6477 0.4094 0.00 0.30 0.60 0.10
#> HSPC_059 3 0.4713 0.4529 0.00 0.36 0.64 0.00
#> LT-HSC_019 3 0.0707 0.7021 0.00 0.02 0.98 0.00
#> HSPC_116 1 0.0000 0.9630 1.00 0.00 0.00 0.00
#> HSPC_086 2 0.0707 0.8703 0.00 0.98 0.00 0.02
#> HSPC_093 4 0.6286 0.5820 0.00 0.20 0.14 0.66
#> HSPC_112 1 0.0000 0.9630 1.00 0.00 0.00 0.00
#> HSPC_124 1 0.0000 0.9630 1.00 0.00 0.00 0.00
#> Prog_104 1 0.0000 0.9630 1.00 0.00 0.00 0.00
#> HSPC_129 1 0.0000 0.9630 1.00 0.00 0.00 0.00
#> HSPC_160 3 0.4994 0.1109 0.00 0.48 0.52 0.00
#> HSPC_137 1 0.0000 0.9630 1.00 0.00 0.00 0.00
#> HSPC_150 1 0.0000 0.9630 1.00 0.00 0.00 0.00
#> Prog_147 2 0.0000 0.8825 0.00 1.00 0.00 0.00
#> Prog_138 1 0.0000 0.9630 1.00 0.00 0.00 0.00
#> HSPC_188 4 0.2706 0.6824 0.02 0.08 0.00 0.90
#> HSPC_194 3 0.4079 0.5757 0.02 0.00 0.80 0.18
#> HSPC_201 2 0.6366 0.4242 0.00 0.64 0.12 0.24
#> HSPC_197 3 0.0707 0.6930 0.00 0.00 0.98 0.02
#> HSPC_209 3 0.3525 0.6883 0.00 0.10 0.86 0.04
#> LT-HSC_053 2 0.1637 0.8488 0.00 0.94 0.06 0.00
#> Prog_181 3 0.3172 0.6508 0.00 0.16 0.84 0.00
#> Prog_169 2 0.1211 0.8625 0.00 0.96 0.04 0.00
#> Prog_198 2 0.2830 0.8209 0.00 0.90 0.04 0.06
#> HSPC_241 3 0.1637 0.6756 0.00 0.00 0.94 0.06
#> HSPC_226 3 0.4790 0.4263 0.00 0.38 0.62 0.00
#> HSPC_234 2 0.3975 0.5926 0.00 0.76 0.00 0.24
#> HSPC_260 2 0.4994 -0.0409 0.00 0.52 0.48 0.00
#> HSPC_272 2 0.2335 0.8377 0.00 0.92 0.06 0.02
#> HSPC_284 3 0.3037 0.6924 0.00 0.10 0.88 0.02
#> HSPC_273 2 0.6554 -0.0332 0.00 0.52 0.08 0.40
#> LT-HSC_079 2 0.4713 0.3759 0.00 0.64 0.36 0.00
#> HSPC_357 1 0.0707 0.9491 0.98 0.00 0.00 0.02
#> HSPC_369 4 0.4277 0.4471 0.28 0.00 0.00 0.72
#> HSPC_375 1 0.0000 0.9630 1.00 0.00 0.00 0.00
#> HSPC_347 2 0.0707 0.8731 0.00 0.98 0.02 0.00
#> Prog_344 2 0.0000 0.8825 0.00 1.00 0.00 0.00
#> HSPC_385 1 0.6797 0.3929 0.60 0.00 0.24 0.16
#> HSPC_397 1 0.0000 0.9630 1.00 0.00 0.00 0.00
#> HSPC_381 2 0.0000 0.8825 0.00 1.00 0.00 0.00
#> HSPC_394 1 0.0000 0.9630 1.00 0.00 0.00 0.00
#> HSPC_401 1 0.0000 0.9630 1.00 0.00 0.00 0.00
#> HSPC_414 2 0.4977 0.0299 0.00 0.54 0.46 0.00
#> HSPC_384 2 0.0000 0.8825 0.00 1.00 0.00 0.00
#> Prog_400 1 0.0000 0.9630 1.00 0.00 0.00 0.00
#> HSPC_452 1 0.3975 0.6927 0.76 0.00 0.00 0.24
#> HSPC_458 4 0.4790 0.4811 0.00 0.38 0.00 0.62
#> HSPC_464 2 0.4790 0.2549 0.00 0.62 0.00 0.38
#> HSPC_429 1 0.0000 0.9630 1.00 0.00 0.00 0.00
#> HSPC_437 3 0.0000 0.6964 0.00 0.00 1.00 0.00
#> Prog_442 2 0.0000 0.8825 0.00 1.00 0.00 0.00
#> LT-HSC_118 2 0.1211 0.8635 0.00 0.96 0.04 0.00
#> HSPC_476 1 0.4610 0.7606 0.80 0.00 0.10 0.10
#> HSPC_484 3 0.0707 0.6935 0.00 0.00 0.98 0.02
#> LT-HSC_129 2 0.0000 0.8825 0.00 1.00 0.00 0.00
#> HSPC_529 1 0.0000 0.9630 1.00 0.00 0.00 0.00
#> HSPC_536 1 0.0000 0.9630 1.00 0.00 0.00 0.00
#> HSPC_542 1 0.0000 0.9630 1.00 0.00 0.00 0.00
#> HSPC_519 2 0.0000 0.8825 0.00 1.00 0.00 0.00
#> LT-HSC_141 1 0.0707 0.9491 0.98 0.00 0.00 0.02
#> HSPC_583 1 0.0000 0.9630 1.00 0.00 0.00 0.00
#> HSPC_561 4 0.1637 0.6674 0.00 0.06 0.00 0.94
#> HSPC_581 2 0.0000 0.8825 0.00 1.00 0.00 0.00
#> HSPC_587 2 0.0000 0.8825 0.00 1.00 0.00 0.00
#> HSPC_564 2 0.0000 0.8825 0.00 1.00 0.00 0.00
#> HSPC_570 2 0.1211 0.8538 0.00 0.96 0.00 0.04
#> HSPC_558 2 0.0000 0.8825 0.00 1.00 0.00 0.00
#> LT-HSC_154 2 0.0000 0.8825 0.00 1.00 0.00 0.00
#> LT-HSC_155 1 0.0000 0.9630 1.00 0.00 0.00 0.00
#> HSPC_619 2 0.0000 0.8825 0.00 1.00 0.00 0.00
#> HSPC_632 2 0.0000 0.8825 0.00 1.00 0.00 0.00
#> HSPC_621 1 0.0707 0.9491 0.98 0.00 0.00 0.02
#> HSPC_616 1 0.2921 0.8331 0.86 0.00 0.00 0.14
#> HSPC_622 1 0.0000 0.9630 1.00 0.00 0.00 0.00
#> HSPC_611 2 0.0000 0.8825 0.00 1.00 0.00 0.00
#> Prog_601 2 0.1637 0.8488 0.00 0.94 0.06 0.00
#> HSPC_650 2 0.0000 0.8825 0.00 1.00 0.00 0.00
#> HSPC_653 1 0.0000 0.9630 1.00 0.00 0.00 0.00
#> HSPC_659 2 0.0000 0.8825 0.00 1.00 0.00 0.00
#> HSPC_642 2 0.0000 0.8825 0.00 1.00 0.00 0.00
#> LT-HSC_175 1 0.0000 0.9630 1.00 0.00 0.00 0.00
#> LT-HSC_178 2 0.0000 0.8825 0.00 1.00 0.00 0.00
#> HSPC_686 3 0.1211 0.6880 0.00 0.00 0.96 0.04
#> HSPC_710 1 0.0000 0.9630 1.00 0.00 0.00 0.00
#> HSPC_711 1 0.0000 0.9630 1.00 0.00 0.00 0.00
#> HSPC_688 1 0.0000 0.9630 1.00 0.00 0.00 0.00
#> HSPC_694 1 0.0707 0.9485 0.98 0.00 0.00 0.02
#> HSPC_712 1 0.0000 0.9630 1.00 0.00 0.00 0.00
#> HSPC_718 1 0.0000 0.9630 1.00 0.00 0.00 0.00
#> LT-HSC_186 1 0.0000 0.9630 1.00 0.00 0.00 0.00
#> LT-HSC_189 3 0.5661 0.3564 0.22 0.00 0.70 0.08
#> HSPC_741 4 0.4841 0.6522 0.00 0.14 0.08 0.78
#> LT-HSC_196 1 0.5594 0.6462 0.72 0.00 0.10 0.18
#> LT-HSC_199 2 0.4907 0.2087 0.00 0.58 0.42 0.00
#> LT-HSC_209 2 0.3172 0.7517 0.00 0.84 0.16 0.00
#> HSPC_850 1 0.0707 0.9491 0.98 0.00 0.00 0.02
Heatmaps for the consensus matrix. It visualizes the probability of two samples to be in a same group.
consensus_heatmap(res, k = 2)
consensus_heatmap(res, k = 3)
consensus_heatmap(res, k = 4)
Heatmaps for the membership of samples in all partitions to see how consistent they are:
membership_heatmap(res, k = 2)
membership_heatmap(res, k = 3)
membership_heatmap(res, k = 4)
As soon as the classes for columns are determined, the signatures that are significantly different between subgroups can be looked for. Following are the heatmaps for signatures.
Signature heatmaps where rows are scaled:
Signature heatmaps where rows are not scaled:
get_signatures(res, k = 2, scale_rows = FALSE)
get_signatures(res, k = 3, scale_rows = FALSE)
get_signatures(res, k = 4, scale_rows = FALSE)
Compare the overlap of signatures from different k:
compare_signatures(res)
get_signature() returns a data frame invisibly. To get the list of signatures, the function
call should be assigned to a variable explicitly. In following code, if plot argument is set
to FALSE, no heatmap is plotted while only the differential analysis is performed.
# code only for demonstration
tb = get_signature(res, k = ..., plot = FALSE)
An example of the output of tb is:
#> which_row fdr mean_1 mean_2 scaled_mean_1 scaled_mean_2 km
#> 1 38 0.042760348 8.373488 9.131774 -0.5533452 0.5164555 1
#> 2 40 0.018707592 7.106213 8.469186 -0.6173731 0.5762149 1
#> 3 55 0.019134737 10.221463 11.207825 -0.6159697 0.5749050 1
#> 4 59 0.006059896 5.921854 7.869574 -0.6899429 0.6439467 1
#> 5 60 0.018055526 8.928898 10.211722 -0.6204761 0.5791110 1
#> 6 98 0.009384629 15.714769 14.887706 0.6635654 -0.6193277 2
...
The columns in tb are:
which_row: row indices corresponding to the input matrix.fdr: FDR for the differential test. mean_x: The mean value in group x.scaled_mean_x: The mean value in group x after rows are scaled.km: Row groups if k-means clustering is applied to rows (which is done by automatically selecting number of clusters).If there are too many signatures, top_signatures = ... can be set to only show the
signatures with the highest FDRs:
# code only for demonstration
# e.g. to show the top 500 most significant rows
tb = get_signature(res, k = ..., top_signatures = 500)
If the signatures are defined as these which are uniquely high in current group, diff_method argument
can be set to "uniquely_high_in_one_group":
# code only for demonstration
tb = get_signature(res, k = ..., diff_method = "uniquely_high_in_one_group")
UMAP plot which shows how samples are separated.
dimension_reduction(res, k = 2, method = "UMAP")
dimension_reduction(res, k = 3, method = "UMAP")
dimension_reduction(res, k = 4, method = "UMAP")
Following heatmap shows how subgroups are split when increasing k:
collect_classes(res)
If matrix rows can be associated to genes, consider to use functional_enrichment(res,
...) to perform function enrichment for the signature genes. See this vignette for more detailed explanations.
Parent node: Node021. Child nodes: Node01111-leaf , Node01112-leaf , Node01113-leaf , Node01121-leaf , Node01122-leaf , Node01211-leaf , Node01212-leaf , Node01213-leaf , Node01221-leaf , Node01222-leaf , Node01223-leaf , Node01311-leaf , Node01312-leaf , Node02111-leaf , Node02112-leaf , Node02121-leaf , Node02122-leaf .
The object with results only for a single top-value method and a single partitioning method can be extracted as:
res = res_rh["0212"]
A summary of res and all the functions that can be applied to it:
res
#> A 'ConsensusPartition' object with k = 2, 3, 4.
#> On a matrix with 13512 rows and 53 columns.
#> Top rows (1351) are extracted by 'ATC' method.
#> Subgroups are detected by 'skmeans' method.
#> Performed in total 150 partitions by row resampling.
#> Best k for subgroups seems to be 2.
#>
#> Following methods can be applied to this 'ConsensusPartition' object:
#> [1] "cola_report" "collect_classes" "collect_plots"
#> [4] "collect_stats" "colnames" "compare_partitions"
#> [7] "compare_signatures" "consensus_heatmap" "dimension_reduction"
#> [10] "functional_enrichment" "get_anno_col" "get_anno"
#> [13] "get_classes" "get_consensus" "get_matrix"
#> [16] "get_membership" "get_param" "get_signatures"
#> [19] "get_stats" "is_best_k" "is_stable_k"
#> [22] "membership_heatmap" "ncol" "nrow"
#> [25] "plot_ecdf" "predict_classes" "rownames"
#> [28] "select_partition_number" "show" "suggest_best_k"
#> [31] "test_to_known_factors" "top_rows_heatmap"
collect_plots() function collects all the plots made from res for all k (number of subgroups)
into one single page to provide an easy and fast comparison between different k.
collect_plots(res)
The plots are:
k and the heatmap of
predicted classes for each k.k.k.k.All the plots in panels can be made by individual functions and they are plotted later in this section.
select_partition_number() produces several plots showing different
statistics for choosing “optimized” k. There are following statistics:
k;k, the area increased is defined as \(A_k - A_{k-1}\).The detailed explanations of these statistics can be found in the cola vignette.
Generally speaking, higher 1-PAC score, higher mean silhouette score or higher
concordance corresponds to better partition. Rand index and Jaccard index
measure how similar the current partition is compared to partition with k-1.
If they are too similar, we won't accept k is better than k-1.
select_partition_number(res)
The numeric values for all these statistics can be obtained by get_stats().
get_stats(res)
#> k 1-PAC mean_silhouette concordance area_increased Rand Jaccard
#> 2 2 0.999 0.965 0.985 0.501 0.499 0.499
#> 3 3 0.713 0.900 0.936 0.303 0.808 0.632
#> 4 4 0.647 0.721 0.837 0.116 0.901 0.723
suggest_best_k() suggests the best \(k\) based on these statistics. The rules are as follows:
suggest_best_k(res)
#> [1] 2
Following is the table of the partitions (You need to click the show/hide
code output link to see it). The membership matrix (columns with name p*)
is inferred by
clue::cl_consensus()
function with the SE method. Basically the value in the membership matrix
represents the probability to belong to a certain group. The finall subgroup
label for an item is determined with the group with highest probability it
belongs to.
In get_classes() function, the entropy is calculated from the membership
matrix and the silhouette score is calculated from the consensus matrix.
cbind(get_classes(res, k = 2), get_membership(res, k = 2))
#> class entropy silhouette p1 p2
#> HSPC_091 2 0.000 0.981 0.00 1.00
#> LT-HSC_025 1 0.000 0.986 1.00 0.00
#> HSPC_092 1 0.000 0.986 1.00 0.00
#> LT-HSC_029 2 0.000 0.981 0.00 1.00
#> LT-HSC_030 1 0.000 0.986 1.00 0.00
#> Prog_086 2 0.000 0.981 0.00 1.00
#> LT-HSC_035 2 0.000 0.981 0.00 1.00
#> Prog_156 2 0.000 0.981 0.00 1.00
#> HSPC_184 1 0.000 0.986 1.00 0.00
#> LT-HSC_059 2 0.000 0.981 0.00 1.00
#> HSPC_217 2 0.000 0.981 0.00 1.00
#> LT-HSC_061 1 0.000 0.986 1.00 0.00
#> HSPC_238 2 0.680 0.787 0.18 0.82
#> Prog_251 2 0.000 0.981 0.00 1.00
#> HSPC_262 1 0.000 0.986 1.00 0.00
#> LT-HSC_083 1 0.000 0.986 1.00 0.00
#> HSPC_319 2 0.000 0.981 0.00 1.00
#> LT-HSC_087 2 0.000 0.981 0.00 1.00
#> HSPC_311 2 0.000 0.981 0.00 1.00
#> Prog_302 2 0.000 0.981 0.00 1.00
#> LT-HSC_092 2 0.000 0.981 0.00 1.00
#> Prog_317 2 0.000 0.981 0.00 1.00
#> LT-HSC_097 1 0.000 0.986 1.00 0.00
#> HSPC_378 1 0.000 0.986 1.00 0.00
#> LT-HSC_104 2 0.000 0.981 0.00 1.00
#> Prog_348 1 0.000 0.986 1.00 0.00
#> HSPC_379 1 0.000 0.986 1.00 0.00
#> HSPC_433 1 0.000 0.986 1.00 0.00
#> HSPC_439 1 0.402 0.903 0.92 0.08
#> HSPC_445 1 0.000 0.986 1.00 0.00
#> HSPC_428 1 0.000 0.986 1.00 0.00
#> Prog_452 1 0.000 0.986 1.00 0.00
#> HSPC_487 1 0.000 0.986 1.00 0.00
#> LT-HSC_127 2 0.000 0.981 0.00 1.00
#> LT-HSC_133 1 0.000 0.986 1.00 0.00
#> HSPC_513 1 0.000 0.986 1.00 0.00
#> Prog_538 1 0.000 0.986 1.00 0.00
#> HSPC_588 1 0.000 0.986 1.00 0.00
#> HSPC_655 1 0.000 0.986 1.00 0.00
#> HSPC_675 1 0.000 0.986 1.00 0.00
#> HSPC_691 1 0.000 0.986 1.00 0.00
#> HSPC_715 2 0.000 0.981 0.00 1.00
#> LT-HSC_181 1 0.000 0.986 1.00 0.00
#> HSPC_713 1 0.904 0.527 0.68 0.32
#> HSPC_793 1 0.000 0.986 1.00 0.00
#> HSPC_763 1 0.000 0.986 1.00 0.00
#> Prog_766 2 0.000 0.981 0.00 1.00
#> Prog_773 2 0.000 0.981 0.00 1.00
#> HSPC_811 2 0.327 0.929 0.06 0.94
#> HSPC_817 2 0.000 0.981 0.00 1.00
#> HSPC_823 1 0.000 0.986 1.00 0.00
#> HSPC_805 2 0.680 0.788 0.18 0.82
#> HSPC_830 1 0.000 0.986 1.00 0.00
cbind(get_classes(res, k = 3), get_membership(res, k = 3))
#> class entropy silhouette p1 p2 p3
#> HSPC_091 2 0.0000 0.9789 0.00 1.00 0.00
#> LT-HSC_025 1 0.2959 0.8894 0.90 0.00 0.10
#> HSPC_092 1 0.2959 0.8873 0.90 0.00 0.10
#> LT-HSC_029 2 0.0000 0.9789 0.00 1.00 0.00
#> LT-HSC_030 1 0.2959 0.8894 0.90 0.00 0.10
#> Prog_086 2 0.3686 0.8264 0.00 0.86 0.14
#> LT-HSC_035 2 0.0000 0.9789 0.00 1.00 0.00
#> Prog_156 3 0.2959 0.8532 0.00 0.10 0.90
#> HSPC_184 1 0.0892 0.9216 0.98 0.00 0.02
#> LT-HSC_059 2 0.0000 0.9789 0.00 1.00 0.00
#> HSPC_217 2 0.2959 0.8946 0.00 0.90 0.10
#> LT-HSC_061 1 0.2959 0.8894 0.90 0.00 0.10
#> HSPC_238 3 0.2959 0.9233 0.10 0.00 0.90
#> Prog_251 2 0.0000 0.9789 0.00 1.00 0.00
#> HSPC_262 3 0.3686 0.8994 0.14 0.00 0.86
#> LT-HSC_083 1 0.0000 0.9258 1.00 0.00 0.00
#> HSPC_319 2 0.0000 0.9789 0.00 1.00 0.00
#> LT-HSC_087 2 0.0000 0.9789 0.00 1.00 0.00
#> HSPC_311 2 0.0000 0.9789 0.00 1.00 0.00
#> Prog_302 2 0.0000 0.9789 0.00 1.00 0.00
#> LT-HSC_092 2 0.0000 0.9789 0.00 1.00 0.00
#> Prog_317 2 0.2959 0.8946 0.00 0.90 0.10
#> LT-HSC_097 1 0.2959 0.8894 0.90 0.00 0.10
#> HSPC_378 3 0.3340 0.9133 0.12 0.00 0.88
#> LT-HSC_104 2 0.0000 0.9789 0.00 1.00 0.00
#> Prog_348 1 0.2066 0.8889 0.94 0.00 0.06
#> HSPC_379 1 0.0000 0.9258 1.00 0.00 0.00
#> HSPC_433 1 0.2537 0.8995 0.92 0.00 0.08
#> HSPC_439 3 0.2959 0.9233 0.10 0.00 0.90
#> HSPC_445 1 0.0000 0.9258 1.00 0.00 0.00
#> HSPC_428 1 0.3340 0.8193 0.88 0.00 0.12
#> Prog_452 3 0.5016 0.7777 0.24 0.00 0.76
#> HSPC_487 1 0.0000 0.9258 1.00 0.00 0.00
#> LT-HSC_127 2 0.0000 0.9789 0.00 1.00 0.00
#> LT-HSC_133 1 0.0000 0.9258 1.00 0.00 0.00
#> HSPC_513 1 0.0000 0.9258 1.00 0.00 0.00
#> Prog_538 1 0.0000 0.9258 1.00 0.00 0.00
#> HSPC_588 1 0.0000 0.9258 1.00 0.00 0.00
#> HSPC_655 3 0.2959 0.9233 0.10 0.00 0.90
#> HSPC_675 1 0.0000 0.9258 1.00 0.00 0.00
#> HSPC_691 1 0.3686 0.8713 0.86 0.00 0.14
#> HSPC_715 2 0.0000 0.9789 0.00 1.00 0.00
#> LT-HSC_181 1 0.0000 0.9258 1.00 0.00 0.00
#> HSPC_713 1 0.4449 0.8623 0.86 0.04 0.10
#> HSPC_793 1 0.1529 0.9041 0.96 0.00 0.04
#> HSPC_763 3 0.2959 0.9233 0.10 0.00 0.90
#> Prog_766 3 0.4555 0.7532 0.00 0.20 0.80
#> Prog_773 2 0.0000 0.9789 0.00 1.00 0.00
#> HSPC_811 3 0.4209 0.8223 0.02 0.12 0.86
#> HSPC_817 2 0.0000 0.9789 0.00 1.00 0.00
#> HSPC_823 1 0.0000 0.9258 1.00 0.00 0.00
#> HSPC_805 3 0.2959 0.9233 0.10 0.00 0.90
#> HSPC_830 1 0.6280 -0.0445 0.54 0.00 0.46
cbind(get_classes(res, k = 4), get_membership(res, k = 4))
#> class entropy silhouette p1 p2 p3 p4
#> HSPC_091 2 0.0000 0.931 0.00 1.00 0.00 0.00
#> LT-HSC_025 4 0.4713 0.735 0.36 0.00 0.00 0.64
#> HSPC_092 1 0.6513 0.399 0.64 0.00 0.18 0.18
#> LT-HSC_029 2 0.6104 0.595 0.00 0.68 0.14 0.18
#> LT-HSC_030 4 0.4713 0.735 0.36 0.00 0.00 0.64
#> Prog_086 2 0.7653 0.168 0.00 0.46 0.24 0.30
#> LT-HSC_035 2 0.0000 0.931 0.00 1.00 0.00 0.00
#> Prog_156 3 0.5284 0.697 0.02 0.10 0.78 0.10
#> HSPC_184 1 0.1211 0.814 0.96 0.00 0.00 0.04
#> LT-HSC_059 2 0.0000 0.931 0.00 1.00 0.00 0.00
#> HSPC_217 4 0.5306 0.468 0.02 0.24 0.02 0.72
#> LT-HSC_061 4 0.4713 0.735 0.36 0.00 0.00 0.64
#> HSPC_238 3 0.5106 0.638 0.00 0.04 0.72 0.24
#> Prog_251 2 0.0000 0.931 0.00 1.00 0.00 0.00
#> HSPC_262 3 0.6497 0.658 0.20 0.00 0.64 0.16
#> LT-HSC_083 1 0.0707 0.828 0.98 0.00 0.00 0.02
#> HSPC_319 2 0.0000 0.931 0.00 1.00 0.00 0.00
#> LT-HSC_087 2 0.0000 0.931 0.00 1.00 0.00 0.00
#> HSPC_311 2 0.0000 0.931 0.00 1.00 0.00 0.00
#> Prog_302 2 0.0000 0.931 0.00 1.00 0.00 0.00
#> LT-HSC_092 2 0.0000 0.931 0.00 1.00 0.00 0.00
#> Prog_317 4 0.5173 0.443 0.02 0.32 0.00 0.66
#> LT-HSC_097 4 0.4713 0.735 0.36 0.00 0.00 0.64
#> HSPC_378 3 0.7148 0.567 0.22 0.00 0.56 0.22
#> LT-HSC_104 2 0.1913 0.890 0.00 0.94 0.04 0.02
#> Prog_348 1 0.4292 0.734 0.82 0.00 0.10 0.08
#> HSPC_379 1 0.1211 0.825 0.96 0.00 0.04 0.00
#> HSPC_433 1 0.2345 0.743 0.90 0.00 0.00 0.10
#> HSPC_439 3 0.1913 0.735 0.04 0.00 0.94 0.02
#> HSPC_445 1 0.0707 0.828 0.98 0.00 0.00 0.02
#> HSPC_428 1 0.3400 0.713 0.82 0.00 0.18 0.00
#> Prog_452 3 0.6262 0.317 0.40 0.00 0.54 0.06
#> HSPC_487 1 0.1211 0.825 0.96 0.00 0.04 0.00
#> LT-HSC_127 2 0.0000 0.931 0.00 1.00 0.00 0.00
#> LT-HSC_133 1 0.0000 0.834 1.00 0.00 0.00 0.00
#> HSPC_513 1 0.1211 0.825 0.96 0.00 0.04 0.00
#> Prog_538 1 0.0000 0.834 1.00 0.00 0.00 0.00
#> HSPC_588 1 0.0000 0.834 1.00 0.00 0.00 0.00
#> HSPC_655 3 0.2345 0.732 0.10 0.00 0.90 0.00
#> HSPC_675 1 0.0000 0.834 1.00 0.00 0.00 0.00
#> HSPC_691 1 0.6611 -0.155 0.46 0.00 0.08 0.46
#> HSPC_715 2 0.0000 0.931 0.00 1.00 0.00 0.00
#> LT-HSC_181 1 0.0000 0.834 1.00 0.00 0.00 0.00
#> HSPC_713 4 0.5139 0.684 0.22 0.02 0.02 0.74
#> HSPC_793 1 0.5147 0.605 0.74 0.00 0.20 0.06
#> HSPC_763 3 0.2830 0.733 0.06 0.00 0.90 0.04
#> Prog_766 3 0.7008 0.548 0.02 0.24 0.62 0.12
#> Prog_773 2 0.0000 0.931 0.00 1.00 0.00 0.00
#> HSPC_811 3 0.8204 0.526 0.06 0.16 0.54 0.24
#> HSPC_817 2 0.3525 0.829 0.00 0.86 0.04 0.10
#> HSPC_823 1 0.0707 0.828 0.98 0.00 0.00 0.02
#> HSPC_805 3 0.3198 0.728 0.04 0.00 0.88 0.08
#> HSPC_830 1 0.5915 0.174 0.56 0.00 0.40 0.04
Heatmaps for the consensus matrix. It visualizes the probability of two samples to be in a same group.
consensus_heatmap(res, k = 2)
consensus_heatmap(res, k = 3)
consensus_heatmap(res, k = 4)
Heatmaps for the membership of samples in all partitions to see how consistent they are:
membership_heatmap(res, k = 2)
membership_heatmap(res, k = 3)
membership_heatmap(res, k = 4)
As soon as the classes for columns are determined, the signatures that are significantly different between subgroups can be looked for. Following are the heatmaps for signatures.
Signature heatmaps where rows are scaled:
Signature heatmaps where rows are not scaled:
get_signatures(res, k = 2, scale_rows = FALSE)
get_signatures(res, k = 3, scale_rows = FALSE)
get_signatures(res, k = 4, scale_rows = FALSE)
Compare the overlap of signatures from different k:
compare_signatures(res)
get_signature() returns a data frame invisibly. To get the list of signatures, the function
call should be assigned to a variable explicitly. In following code, if plot argument is set
to FALSE, no heatmap is plotted while only the differential analysis is performed.
# code only for demonstration
tb = get_signature(res, k = ..., plot = FALSE)
An example of the output of tb is:
#> which_row fdr mean_1 mean_2 scaled_mean_1 scaled_mean_2 km
#> 1 38 0.042760348 8.373488 9.131774 -0.5533452 0.5164555 1
#> 2 40 0.018707592 7.106213 8.469186 -0.6173731 0.5762149 1
#> 3 55 0.019134737 10.221463 11.207825 -0.6159697 0.5749050 1
#> 4 59 0.006059896 5.921854 7.869574 -0.6899429 0.6439467 1
#> 5 60 0.018055526 8.928898 10.211722 -0.6204761 0.5791110 1
#> 6 98 0.009384629 15.714769 14.887706 0.6635654 -0.6193277 2
...
The columns in tb are:
which_row: row indices corresponding to the input matrix.fdr: FDR for the differential test. mean_x: The mean value in group x.scaled_mean_x: The mean value in group x after rows are scaled.km: Row groups if k-means clustering is applied to rows (which is done by automatically selecting number of clusters).If there are too many signatures, top_signatures = ... can be set to only show the
signatures with the highest FDRs:
# code only for demonstration
# e.g. to show the top 500 most significant rows
tb = get_signature(res, k = ..., top_signatures = 500)
If the signatures are defined as these which are uniquely high in current group, diff_method argument
can be set to "uniquely_high_in_one_group":
# code only for demonstration
tb = get_signature(res, k = ..., diff_method = "uniquely_high_in_one_group")
UMAP plot which shows how samples are separated.
dimension_reduction(res, k = 2, method = "UMAP")
dimension_reduction(res, k = 3, method = "UMAP")
dimension_reduction(res, k = 4, method = "UMAP")
Following heatmap shows how subgroups are split when increasing k:
collect_classes(res)
If matrix rows can be associated to genes, consider to use functional_enrichment(res,
...) to perform function enrichment for the signature genes. See this vignette for more detailed explanations.
Parent node: Node0. Child nodes: Node011 , Node012 , Node013 , Node014 , Node021 , Node022-leaf , Node023-leaf , Node031 , Node032 , Node033 , Node041 , Node042 , Node043-leaf .
The object with results only for a single top-value method and a single partitioning method can be extracted as:
res = res_rh["03"]
A summary of res and all the functions that can be applied to it:
res
#> A 'ConsensusPartition' object with k = 2, 3, 4.
#> On a matrix with 18187 rows and 373 columns.
#> Top rows (1819) are extracted by 'ATC' method.
#> Subgroups are detected by 'skmeans' method.
#> Performed in total 150 partitions by row resampling.
#> Best k for subgroups seems to be 3.
#>
#> Following methods can be applied to this 'ConsensusPartition' object:
#> [1] "cola_report" "collect_classes" "collect_plots"
#> [4] "collect_stats" "colnames" "compare_partitions"
#> [7] "compare_signatures" "consensus_heatmap" "dimension_reduction"
#> [10] "functional_enrichment" "get_anno_col" "get_anno"
#> [13] "get_classes" "get_consensus" "get_matrix"
#> [16] "get_membership" "get_param" "get_signatures"
#> [19] "get_stats" "is_best_k" "is_stable_k"
#> [22] "membership_heatmap" "ncol" "nrow"
#> [25] "plot_ecdf" "predict_classes" "rownames"
#> [28] "select_partition_number" "show" "suggest_best_k"
#> [31] "test_to_known_factors" "top_rows_heatmap"
collect_plots() function collects all the plots made from res for all k (number of subgroups)
into one single page to provide an easy and fast comparison between different k.
collect_plots(res)
The plots are:
k and the heatmap of
predicted classes for each k.k.k.k.All the plots in panels can be made by individual functions and they are plotted later in this section.
select_partition_number() produces several plots showing different
statistics for choosing “optimized” k. There are following statistics:
k;k, the area increased is defined as \(A_k - A_{k-1}\).The detailed explanations of these statistics can be found in the cola vignette.
Generally speaking, higher 1-PAC score, higher mean silhouette score or higher
concordance corresponds to better partition. Rand index and Jaccard index
measure how similar the current partition is compared to partition with k-1.
If they are too similar, we won't accept k is better than k-1.
select_partition_number(res)
The numeric values for all these statistics can be obtained by get_stats().
get_stats(res)
#> k 1-PAC mean_silhouette concordance area_increased Rand Jaccard
#> 2 2 1.000 0.981 0.992 0.501 0.500 0.500
#> 3 3 0.993 0.968 0.987 0.302 0.796 0.613
#> 4 4 0.764 0.827 0.887 0.101 0.910 0.754
suggest_best_k() suggests the best \(k\) based on these statistics. The rules are as follows:
suggest_best_k(res)
#> [1] 3
#> attr(,"optional")
#> [1] 2
There is also optional best \(k\) = 2 that is worth to check.
Following is the table of the partitions (You need to click the show/hide
code output link to see it). The membership matrix (columns with name p*)
is inferred by
clue::cl_consensus()
function with the SE method. Basically the value in the membership matrix
represents the probability to belong to a certain group. The finall subgroup
label for an item is determined with the group with highest probability it
belongs to.
In get_classes() function, the entropy is calculated from the membership
matrix and the silhouette score is calculated from the consensus matrix.
cbind(get_classes(res, k = 2), get_membership(res, k = 2))
#> class entropy silhouette p1 p2
#> HSPC_031 2 0.000 0.9900 0.00 1.00
#> HSPC_027 2 0.000 0.9900 0.00 1.00
#> HSPC_033 1 0.000 0.9951 1.00 0.00
#> HSPC_028 1 0.000 0.9951 1.00 0.00
#> HSPC_040 2 0.000 0.9900 0.00 1.00
#> HSPC_004 1 0.000 0.9951 1.00 0.00
#> HSPC_030 1 0.000 0.9951 1.00 0.00
#> HSPC_042 2 0.000 0.9900 0.00 1.00
#> Prog_031 2 0.000 0.9900 0.00 1.00
#> Prog_037 2 0.000 0.9900 0.00 1.00
#> Prog_026 2 0.995 0.1524 0.46 0.54
#> LT-HSC_008 1 0.000 0.9951 1.00 0.00
#> Prog_004 2 0.000 0.9900 0.00 1.00
#> HSPC_049 1 0.469 0.8871 0.90 0.10
#> HSPC_080 2 0.000 0.9900 0.00 1.00
#> HSPC_051 2 0.000 0.9900 0.00 1.00
#> HSPC_069 1 0.000 0.9951 1.00 0.00
#> HSPC_081 2 0.000 0.9900 0.00 1.00
#> HSPC_058 1 0.000 0.9951 1.00 0.00
#> HSPC_070 2 0.000 0.9900 0.00 1.00
#> HSPC_076 2 0.000 0.9900 0.00 1.00
#> HSPC_046 2 0.000 0.9900 0.00 1.00
#> HSPC_065 2 0.000 0.9900 0.00 1.00
#> HSPC_054 1 0.000 0.9951 1.00 0.00
#> HSPC_060 1 0.000 0.9951 1.00 0.00
#> HSPC_066 1 0.000 0.9951 1.00 0.00
#> HSPC_048 2 0.000 0.9900 0.00 1.00
#> Prog_073 2 0.000 0.9900 0.00 1.00
#> Prog_068 2 0.000 0.9900 0.00 1.00
#> LT-HSC_020 1 0.000 0.9951 1.00 0.00
#> Prog_044 2 0.000 0.9900 0.00 1.00
#> Prog_072 2 0.000 0.9900 0.00 1.00
#> LT-HSC_024 2 0.000 0.9900 0.00 1.00
#> Prog_048 2 0.000 0.9900 0.00 1.00
#> HSPC_122 1 0.000 0.9951 1.00 0.00
#> HSPC_100 2 0.000 0.9900 0.00 1.00
#> HSPC_118 1 0.000 0.9951 1.00 0.00
#> LT-HSC_028 2 0.000 0.9900 0.00 1.00
#> HSPC_088 2 0.000 0.9900 0.00 1.00
#> HSPC_125 1 0.000 0.9951 1.00 0.00
#> HSPC_089 2 0.000 0.9900 0.00 1.00
#> HSPC_108 1 0.000 0.9951 1.00 0.00
#> HSPC_114 2 0.000 0.9900 0.00 1.00
#> HSPC_120 1 0.000 0.9951 1.00 0.00
#> HSPC_126 2 0.000 0.9900 0.00 1.00
#> LT-HSC_031 2 0.000 0.9900 0.00 1.00
#> Prog_092 2 0.000 0.9900 0.00 1.00
#> Prog_122 2 0.000 0.9900 0.00 1.00
#> LT-HSC_033 1 0.000 0.9951 1.00 0.00
#> Prog_106 1 0.000 0.9951 1.00 0.00
#> Prog_124 2 0.000 0.9900 0.00 1.00
#> LT-HSC_034 1 0.000 0.9951 1.00 0.00
#> Prog_125 1 0.000 0.9951 1.00 0.00
#> Prog_096 2 0.000 0.9900 0.00 1.00
#> Prog_102 1 0.000 0.9951 1.00 0.00
#> LT-HSC_036 2 0.000 0.9900 0.00 1.00
#> HSPC_135 1 0.000 0.9951 1.00 0.00
#> HSPC_144 1 0.000 0.9951 1.00 0.00
#> HSPC_162 2 0.000 0.9900 0.00 1.00
#> Prog_151 2 0.000 0.9900 0.00 1.00
#> Prog_127 2 0.000 0.9900 0.00 1.00
#> Prog_135 2 0.000 0.9900 0.00 1.00
#> Prog_142 2 0.000 0.9900 0.00 1.00
#> Prog_154 2 0.000 0.9900 0.00 1.00
#> LT-HSC_046 1 0.000 0.9951 1.00 0.00
#> Prog_161 2 0.000 0.9900 0.00 1.00
#> Prog_131 2 0.000 0.9900 0.00 1.00
#> HSPC_193 2 0.000 0.9900 0.00 1.00
#> HSPC_199 1 0.000 0.9951 1.00 0.00
#> HSPC_183 2 0.000 0.9900 0.00 1.00
#> HSPC_189 1 0.000 0.9951 1.00 0.00
#> HSPC_207 2 0.000 0.9900 0.00 1.00
#> HSPC_178 1 0.000 0.9951 1.00 0.00
#> HSPC_202 2 0.000 0.9900 0.00 1.00
#> HSPC_186 2 0.000 0.9900 0.00 1.00
#> HSPC_198 1 0.000 0.9951 1.00 0.00
#> HSPC_174 1 0.000 0.9951 1.00 0.00
#> Prog_187 2 0.000 0.9900 0.00 1.00
#> Prog_199 2 0.000 0.9900 0.00 1.00
#> LT-HSC_057 1 0.000 0.9951 1.00 0.00
#> Prog_208 2 0.000 0.9900 0.00 1.00
#> LT-HSC_058 1 0.000 0.9951 1.00 0.00
#> Prog_191 2 0.000 0.9900 0.00 1.00
#> Prog_180 2 0.000 0.9900 0.00 1.00
#> Prog_210 2 0.000 0.9900 0.00 1.00
#> LT-HSC_063 2 0.000 0.9900 0.00 1.00
#> HSPC_244 2 0.000 0.9900 0.00 1.00
#> HSPC_221 1 0.000 0.9951 1.00 0.00
#> LT-HSC_065 1 0.000 0.9951 1.00 0.00
#> HSPC_240 1 0.000 0.9951 1.00 0.00
#> LT-HSC_066 1 0.000 0.9951 1.00 0.00
#> Prog_247 1 0.000 0.9951 1.00 0.00
#> Prog_225 2 0.000 0.9900 0.00 1.00
#> LT-HSC_069 2 0.000 0.9900 0.00 1.00
#> Prog_226 1 0.000 0.9951 1.00 0.00
#> Prog_232 2 0.000 0.9900 0.00 1.00
#> Prog_244 2 0.000 0.9900 0.00 1.00
#> LT-HSC_071 2 0.000 0.9900 0.00 1.00
#> Prog_222 2 0.000 0.9900 0.00 1.00
#> Prog_246 2 0.000 0.9900 0.00 1.00
#> Prog_252 2 0.000 0.9900 0.00 1.00
#> HSPC_267 1 0.000 0.9951 1.00 0.00
#> HSPC_291 2 0.141 0.9706 0.02 0.98
#> LT-HSC_075 1 0.000 0.9951 1.00 0.00
#> HSPC_255 1 0.000 0.9951 1.00 0.00
#> HSPC_270 2 0.000 0.9900 0.00 1.00
#> HSPC_276 2 0.000 0.9900 0.00 1.00
#> Prog_259 1 0.000 0.9951 1.00 0.00
#> Prog_271 2 0.000 0.9900 0.00 1.00
#> Prog_277 1 0.000 0.9951 1.00 0.00
#> LT-HSC_080 2 0.000 0.9900 0.00 1.00
#> Prog_280 1 0.000 0.9951 1.00 0.00
#> LT-HSC_082 2 0.000 0.9900 0.00 1.00
#> Prog_293 2 0.000 0.9900 0.00 1.00
#> LT-HSC_084 2 0.000 0.9900 0.00 1.00
#> HSPC_304 2 0.000 0.9900 0.00 1.00
#> HSPC_322 1 0.000 0.9951 1.00 0.00
#> HSPC_298 2 0.000 0.9900 0.00 1.00
#> HSPC_323 1 0.000 0.9951 1.00 0.00
#> HSPC_299 2 0.000 0.9900 0.00 1.00
#> HSPC_306 2 0.000 0.9900 0.00 1.00
#> HSPC_324 1 0.000 0.9951 1.00 0.00
#> HSPC_330 1 0.000 0.9951 1.00 0.00
#> LT-HSC_090 2 0.000 0.9900 0.00 1.00
#> Prog_314 2 0.000 0.9900 0.00 1.00
#> HSPC_349 1 0.000 0.9951 1.00 0.00
#> HSPC_374 2 0.000 0.9900 0.00 1.00
#> HSPC_339 2 0.000 0.9900 0.00 1.00
#> HSPC_359 2 0.000 0.9900 0.00 1.00
#> HSPC_348 2 0.000 0.9900 0.00 1.00
#> Prog_358 1 0.000 0.9951 1.00 0.00
#> Prog_378 2 0.000 0.9900 0.00 1.00
#> HSPC_391 1 0.000 0.9951 1.00 0.00
#> HSPC_392 2 0.000 0.9900 0.00 1.00
#> HSPC_398 2 0.000 0.9900 0.00 1.00
#> HSPC_416 1 0.000 0.9951 1.00 0.00
#> HSPC_422 2 0.000 0.9900 0.00 1.00
#> HSPC_380 2 0.469 0.8834 0.10 0.90
#> HSPC_399 1 0.000 0.9951 1.00 0.00
#> HSPC_405 2 0.000 0.9900 0.00 1.00
#> HSPC_418 1 0.000 0.9951 1.00 0.00
#> HSPC_396 2 0.000 0.9900 0.00 1.00
#> HSPC_402 2 0.000 0.9900 0.00 1.00
#> Prog_394 2 0.000 0.9900 0.00 1.00
#> Prog_382 1 0.000 0.9951 1.00 0.00
#> Prog_407 2 0.000 0.9900 0.00 1.00
#> HSPC_463 2 0.000 0.9900 0.00 1.00
#> LT-HSC_110 1 0.000 0.9951 1.00 0.00
#> HSPC_435 1 0.000 0.9951 1.00 0.00
#> HSPC_441 1 0.000 0.9951 1.00 0.00
#> HSPC_447 2 0.000 0.9900 0.00 1.00
#> HSPC_453 2 0.000 0.9900 0.00 1.00
#> HSPC_459 1 0.000 0.9951 1.00 0.00
#> HSPC_465 1 0.000 0.9951 1.00 0.00
#> HSPC_448 1 0.000 0.9951 1.00 0.00
#> HSPC_460 1 0.000 0.9951 1.00 0.00
#> LT-HSC_112 2 0.000 0.9900 0.00 1.00
#> HSPC_430 1 0.000 0.9951 1.00 0.00
#> HSPC_443 1 0.000 0.9951 1.00 0.00
#> HSPC_449 1 0.000 0.9951 1.00 0.00
#> HSPC_467 1 0.000 0.9951 1.00 0.00
#> LT-HSC_113 2 0.000 0.9900 0.00 1.00
#> HSPC_431 1 0.000 0.9951 1.00 0.00
#> HSPC_462 1 0.000 0.9951 1.00 0.00
#> HSPC_468 1 0.000 0.9951 1.00 0.00
#> Prog_433 1 0.000 0.9951 1.00 0.00
#> Prog_439 2 0.000 0.9900 0.00 1.00
#> Prog_445 2 0.000 0.9900 0.00 1.00
#> Prog_463 2 0.795 0.6842 0.24 0.76
#> Prog_446 2 0.000 0.9900 0.00 1.00
#> Prog_464 2 0.141 0.9706 0.02 0.98
#> LT-HSC_116 1 0.000 0.9951 1.00 0.00
#> Prog_459 1 0.141 0.9754 0.98 0.02
#> LT-HSC_117 1 0.000 0.9951 1.00 0.00
#> Prog_448 2 0.000 0.9900 0.00 1.00
#> Prog_455 1 0.000 0.9951 1.00 0.00
#> Prog_467 2 0.000 0.9900 0.00 1.00
#> Prog_431 2 0.000 0.9900 0.00 1.00
#> HSPC_490 1 0.000 0.9951 1.00 0.00
#> HSPC_496 1 0.000 0.9951 1.00 0.00
#> HSPC_502 2 0.000 0.9900 0.00 1.00
#> LT-HSC_124 1 0.000 0.9951 1.00 0.00
#> HSPC_472 1 0.000 0.9951 1.00 0.00
#> HSPC_479 1 0.000 0.9951 1.00 0.00
#> LT-HSC_125 1 0.000 0.9951 1.00 0.00
#> HSPC_473 1 0.000 0.9951 1.00 0.00
#> HSPC_480 2 0.000 0.9900 0.00 1.00
#> HSPC_492 2 0.000 0.9900 0.00 1.00
#> HSPC_498 1 0.000 0.9951 1.00 0.00
#> LT-HSC_126 1 0.000 0.9951 1.00 0.00
#> HSPC_474 2 0.000 0.9900 0.00 1.00
#> Prog_481 2 0.000 0.9900 0.00 1.00
#> LT-HSC_128 1 0.000 0.9951 1.00 0.00
#> Prog_495 2 0.000 0.9900 0.00 1.00
#> Prog_496 2 0.000 0.9900 0.00 1.00
#> Prog_509 1 0.000 0.9951 1.00 0.00
#> LT-HSC_131 1 0.000 0.9951 1.00 0.00
#> Prog_492 1 0.000 0.9951 1.00 0.00
#> Prog_474 2 0.000 0.9900 0.00 1.00
#> HSPC_523 2 0.000 0.9900 0.00 1.00
#> HSPC_547 2 0.000 0.9900 0.00 1.00
#> HSPC_512 2 0.000 0.9900 0.00 1.00
#> HSPC_526 1 0.000 0.9951 1.00 0.00
#> HSPC_538 1 0.000 0.9951 1.00 0.00
#> HSPC_514 1 0.000 0.9951 1.00 0.00
#> HSPC_533 2 0.000 0.9900 0.00 1.00
#> HSPC_515 1 0.000 0.9951 1.00 0.00
#> HSPC_534 1 0.000 0.9951 1.00 0.00
#> HSPC_540 2 0.000 0.9900 0.00 1.00
#> HSPC_516 2 0.000 0.9900 0.00 1.00
#> Prog_517 2 0.000 0.9900 0.00 1.00
#> LT-HSC_139 1 0.000 0.9951 1.00 0.00
#> Prog_511 1 0.000 0.9951 1.00 0.00
#> Prog_513 1 0.634 0.8088 0.84 0.16
#> HSPC_571 1 0.000 0.9951 1.00 0.00
#> LT-HSC_146 1 0.000 0.9951 1.00 0.00
#> HSPC_567 1 0.000 0.9951 1.00 0.00
#> HSPC_579 1 0.000 0.9951 1.00 0.00
#> HSPC_580 2 0.000 0.9900 0.00 1.00
#> HSPC_586 2 0.999 0.0822 0.48 0.52
#> HSPC_592 1 0.000 0.9951 1.00 0.00
#> HSPC_556 1 0.795 0.6834 0.76 0.24
#> HSPC_563 1 0.000 0.9951 1.00 0.00
#> HSPC_575 1 0.000 0.9951 1.00 0.00
#> HSPC_557 2 0.000 0.9900 0.00 1.00
#> LT-HSC_151 2 0.000 0.9900 0.00 1.00
#> Prog_572 2 0.000 0.9900 0.00 1.00
#> Prog_554 1 0.000 0.9951 1.00 0.00
#> Prog_585 2 0.000 0.9900 0.00 1.00
#> Prog_555 1 0.000 0.9951 1.00 0.00
#> Prog_568 2 0.000 0.9900 0.00 1.00
#> Prog_580 1 0.000 0.9951 1.00 0.00
#> Prog_556 2 0.000 0.9900 0.00 1.00
#> Prog_564 1 0.000 0.9951 1.00 0.00
#> Prog_588 1 0.000 0.9951 1.00 0.00
#> Prog_594 2 0.000 0.9900 0.00 1.00
#> Prog_558 1 0.000 0.9951 1.00 0.00
#> HSPC_595 1 0.000 0.9951 1.00 0.00
#> HSPC_603 2 0.000 0.9900 0.00 1.00
#> HSPC_617 2 0.000 0.9900 0.00 1.00
#> HSPC_606 1 0.000 0.9951 1.00 0.00
#> HSPC_612 1 0.000 0.9951 1.00 0.00
#> HSPC_624 2 0.000 0.9900 0.00 1.00
#> HSPC_636 1 0.000 0.9951 1.00 0.00
#> Prog_613 2 0.000 0.9900 0.00 1.00
#> Prog_631 2 0.000 0.9900 0.00 1.00
#> LT-HSC_164 1 0.000 0.9951 1.00 0.00
#> Prog_596 2 0.000 0.9900 0.00 1.00
#> Prog_627 1 0.000 0.9951 1.00 0.00
#> Prog_597 1 0.855 0.6100 0.72 0.28
#> Prog_604 1 0.000 0.9951 1.00 0.00
#> Prog_610 2 0.000 0.9900 0.00 1.00
#> Prog_611 1 0.000 0.9951 1.00 0.00
#> Prog_617 1 0.000 0.9951 1.00 0.00
#> Prog_635 2 0.000 0.9900 0.00 1.00
#> Prog_606 1 0.000 0.9951 1.00 0.00
#> HSPC_649 2 0.000 0.9900 0.00 1.00
#> HSPC_637 1 0.000 0.9951 1.00 0.00
#> HSPC_668 2 0.000 0.9900 0.00 1.00
#> HSPC_674 1 0.000 0.9951 1.00 0.00
#> HSPC_645 2 0.000 0.9900 0.00 1.00
#> HSPC_639 1 0.000 0.9951 1.00 0.00
#> HSPC_646 1 0.000 0.9951 1.00 0.00
#> HSPC_664 2 0.000 0.9900 0.00 1.00
#> HSPC_640 1 0.000 0.9951 1.00 0.00
#> HSPC_671 2 0.000 0.9900 0.00 1.00
#> HSPC_641 1 0.000 0.9951 1.00 0.00
#> HSPC_672 2 0.000 0.9900 0.00 1.00
#> LT-HSC_174 1 0.000 0.9951 1.00 0.00
#> Prog_644 2 0.000 0.9900 0.00 1.00
#> Prog_656 2 0.000 0.9900 0.00 1.00
#> Prog_662 2 0.000 0.9900 0.00 1.00
#> Prog_674 2 0.000 0.9900 0.00 1.00
#> Prog_651 1 0.000 0.9951 1.00 0.00
#> Prog_676 2 0.000 0.9900 0.00 1.00
#> Prog_659 2 0.000 0.9900 0.00 1.00
#> Prog_665 1 0.000 0.9951 1.00 0.00
#> Prog_671 1 0.000 0.9951 1.00 0.00
#> LT-HSC_179 1 0.000 0.9951 1.00 0.00
#> Prog_660 1 0.000 0.9951 1.00 0.00
#> Prog_666 2 0.000 0.9900 0.00 1.00
#> Prog_672 1 0.000 0.9951 1.00 0.00
#> Prog_642 2 0.000 0.9900 0.00 1.00
#> HSPC_679 1 0.000 0.9951 1.00 0.00
#> LT-HSC_183 1 0.000 0.9951 1.00 0.00
#> HSPC_706 2 0.000 0.9900 0.00 1.00
#> LT-HSC_184 1 0.000 0.9951 1.00 0.00
#> HSPC_708 1 0.000 0.9951 1.00 0.00
#> LT-HSC_187 1 0.000 0.9951 1.00 0.00
#> Prog_692 2 0.000 0.9900 0.00 1.00
#> Prog_704 1 0.000 0.9951 1.00 0.00
#> Prog_710 1 0.000 0.9951 1.00 0.00
#> Prog_716 2 0.000 0.9900 0.00 1.00
#> LT-HSC_188 1 0.000 0.9951 1.00 0.00
#> Prog_711 2 0.000 0.9900 0.00 1.00
#> Prog_694 2 0.000 0.9900 0.00 1.00
#> Prog_689 2 0.000 0.9900 0.00 1.00
#> Prog_707 2 0.000 0.9900 0.00 1.00
#> LT-HSC_191 1 0.000 0.9951 1.00 0.00
#> Prog_690 2 0.000 0.9900 0.00 1.00
#> Prog_684 2 0.000 0.9900 0.00 1.00
#> HSPC_758 2 0.000 0.9900 0.00 1.00
#> HSPC_722 1 0.000 0.9951 1.00 0.00
#> HSPC_729 1 0.000 0.9951 1.00 0.00
#> HSPC_753 1 0.000 0.9951 1.00 0.00
#> HSPC_759 1 0.000 0.9951 1.00 0.00
#> LT-HSC_195 1 0.000 0.9951 1.00 0.00
#> HSPC_723 2 0.000 0.9900 0.00 1.00
#> HSPC_730 1 0.000 0.9951 1.00 0.00
#> HSPC_736 2 0.000 0.9900 0.00 1.00
#> HSPC_742 1 0.000 0.9951 1.00 0.00
#> HSPC_724 2 0.000 0.9900 0.00 1.00
#> HSPC_743 1 0.000 0.9951 1.00 0.00
#> HSPC_755 1 0.000 0.9951 1.00 0.00
#> HSPC_761 2 0.000 0.9900 0.00 1.00
#> HSPC_732 2 0.000 0.9900 0.00 1.00
#> HSPC_750 1 0.000 0.9951 1.00 0.00
#> Prog_733 2 0.000 0.9900 0.00 1.00
#> Prog_745 2 0.000 0.9900 0.00 1.00
#> Prog_751 2 0.000 0.9900 0.00 1.00
#> Prog_728 2 0.990 0.2195 0.44 0.56
#> Prog_740 2 0.000 0.9900 0.00 1.00
#> Prog_752 2 0.000 0.9900 0.00 1.00
#> Prog_758 2 0.000 0.9900 0.00 1.00
#> Prog_747 2 0.000 0.9900 0.00 1.00
#> LT-HSC_202 1 0.000 0.9951 1.00 0.00
#> Prog_724 2 0.000 0.9900 0.00 1.00
#> Prog_737 1 0.000 0.9951 1.00 0.00
#> Prog_725 1 0.000 0.9951 1.00 0.00
#> Prog_738 2 0.000 0.9900 0.00 1.00
#> Prog_744 2 0.000 0.9900 0.00 1.00
#> Prog_762 1 0.000 0.9951 1.00 0.00
#> LT-HSC_204 2 0.000 0.9900 0.00 1.00
#> Prog_726 1 0.000 0.9951 1.00 0.00
#> HSPC_794 2 0.680 0.7785 0.18 0.82
#> HSPC_771 2 0.000 0.9900 0.00 1.00
#> HSPC_777 2 0.000 0.9900 0.00 1.00
#> HSPC_795 2 0.000 0.9900 0.00 1.00
#> HSPC_801 1 0.000 0.9951 1.00 0.00
#> HSPC_778 1 0.000 0.9951 1.00 0.00
#> HSPC_784 1 0.000 0.9951 1.00 0.00
#> HSPC_773 1 0.327 0.9335 0.94 0.06
#> HSPC_785 1 0.000 0.9951 1.00 0.00
#> HSPC_797 2 0.000 0.9900 0.00 1.00
#> HSPC_774 2 0.000 0.9900 0.00 1.00
#> HSPC_780 1 0.000 0.9951 1.00 0.00
#> HSPC_786 1 0.000 0.9951 1.00 0.00
#> Prog_775 2 0.000 0.9900 0.00 1.00
#> Prog_799 2 0.000 0.9900 0.00 1.00
#> LT-HSC_212 1 0.000 0.9951 1.00 0.00
#> Prog_784 2 0.000 0.9900 0.00 1.00
#> LT-HSC_214 1 0.000 0.9951 1.00 0.00
#> Prog_785 2 0.000 0.9900 0.00 1.00
#> Prog_797 1 0.000 0.9951 1.00 0.00
#> LT-HSC_215 2 0.000 0.9900 0.00 1.00
#> HSPC_835 2 0.000 0.9900 0.00 1.00
#> HSPC_818 1 0.000 0.9951 1.00 0.00
#> HSPC_824 1 0.000 0.9951 1.00 0.00
#> HSPC_825 1 0.000 0.9951 1.00 0.00
#> HSPC_831 1 0.000 0.9951 1.00 0.00
#> HSPC_843 1 0.000 0.9951 1.00 0.00
#> HSPC_826 1 0.000 0.9951 1.00 0.00
#> HSPC_832 2 0.000 0.9900 0.00 1.00
#> HSPC_838 2 0.000 0.9900 0.00 1.00
#> HSPC_815 2 0.000 0.9900 0.00 1.00
#> HSPC_845 1 0.000 0.9951 1.00 0.00
#> HSPC_822 1 0.000 0.9951 1.00 0.00
#> HSPC_828 2 0.000 0.9900 0.00 1.00
#> HSPC_834 1 0.000 0.9951 1.00 0.00
#> Prog_823 1 0.000 0.9951 1.00 0.00
#> Prog_806 2 0.000 0.9900 0.00 1.00
#> Prog_827 2 0.000 0.9900 0.00 1.00
#> Prog_851 2 0.000 0.9900 0.00 1.00
cbind(get_classes(res, k = 3), get_membership(res, k = 3))
#> class entropy silhouette p1 p2 p3
#> HSPC_031 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_027 3 0.0000 0.9877 0.00 0.00 1.00
#> HSPC_033 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_028 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_040 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_004 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_030 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_042 2 0.0000 0.9748 0.00 1.00 0.00
#> Prog_031 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_037 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_026 3 0.0000 0.9877 0.00 0.00 1.00
#> LT-HSC_008 1 0.0000 0.9930 1.00 0.00 0.00
#> Prog_004 3 0.0000 0.9877 0.00 0.00 1.00
#> HSPC_049 1 0.5858 0.6589 0.74 0.24 0.02
#> HSPC_080 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_051 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_069 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_081 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_058 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_070 3 0.0000 0.9877 0.00 0.00 1.00
#> HSPC_076 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_046 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_065 2 0.1529 0.9393 0.00 0.96 0.04
#> HSPC_054 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_060 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_066 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_048 2 0.0000 0.9748 0.00 1.00 0.00
#> Prog_073 2 0.0000 0.9748 0.00 1.00 0.00
#> Prog_068 2 0.3340 0.8544 0.00 0.88 0.12
#> LT-HSC_020 1 0.0000 0.9930 1.00 0.00 0.00
#> Prog_044 2 0.0000 0.9748 0.00 1.00 0.00
#> Prog_072 3 0.0000 0.9877 0.00 0.00 1.00
#> LT-HSC_024 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_048 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_122 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_100 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_118 1 0.0000 0.9930 1.00 0.00 0.00
#> LT-HSC_028 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_088 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_125 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_089 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_108 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_114 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_120 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_126 2 0.0000 0.9748 0.00 1.00 0.00
#> LT-HSC_031 2 0.0000 0.9748 0.00 1.00 0.00
#> Prog_092 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_122 3 0.0000 0.9877 0.00 0.00 1.00
#> LT-HSC_033 1 0.0000 0.9930 1.00 0.00 0.00
#> Prog_106 1 0.0000 0.9930 1.00 0.00 0.00
#> Prog_124 3 0.0000 0.9877 0.00 0.00 1.00
#> LT-HSC_034 1 0.0000 0.9930 1.00 0.00 0.00
#> Prog_125 1 0.0000 0.9930 1.00 0.00 0.00
#> Prog_096 2 0.0000 0.9748 0.00 1.00 0.00
#> Prog_102 1 0.0000 0.9930 1.00 0.00 0.00
#> LT-HSC_036 3 0.0000 0.9877 0.00 0.00 1.00
#> HSPC_135 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_144 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_162 2 0.0000 0.9748 0.00 1.00 0.00
#> Prog_151 2 0.0000 0.9748 0.00 1.00 0.00
#> Prog_127 2 0.0000 0.9748 0.00 1.00 0.00
#> Prog_135 2 0.0000 0.9748 0.00 1.00 0.00
#> Prog_142 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_154 3 0.0000 0.9877 0.00 0.00 1.00
#> LT-HSC_046 1 0.0000 0.9930 1.00 0.00 0.00
#> Prog_161 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_131 3 0.0000 0.9877 0.00 0.00 1.00
#> HSPC_193 3 0.0000 0.9877 0.00 0.00 1.00
#> HSPC_199 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_183 3 0.4555 0.7449 0.00 0.20 0.80
#> HSPC_189 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_207 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_178 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_202 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_186 3 0.0000 0.9877 0.00 0.00 1.00
#> HSPC_198 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_174 1 0.0000 0.9930 1.00 0.00 0.00
#> Prog_187 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_199 2 0.0000 0.9748 0.00 1.00 0.00
#> LT-HSC_057 1 0.0000 0.9930 1.00 0.00 0.00
#> Prog_208 3 0.0000 0.9877 0.00 0.00 1.00
#> LT-HSC_058 2 0.1529 0.9353 0.04 0.96 0.00
#> Prog_191 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_180 2 0.0000 0.9748 0.00 1.00 0.00
#> Prog_210 2 0.0000 0.9748 0.00 1.00 0.00
#> LT-HSC_063 3 0.0000 0.9877 0.00 0.00 1.00
#> HSPC_244 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_221 1 0.0000 0.9930 1.00 0.00 0.00
#> LT-HSC_065 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_240 1 0.0000 0.9930 1.00 0.00 0.00
#> LT-HSC_066 1 0.0000 0.9930 1.00 0.00 0.00
#> Prog_247 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_225 3 0.0000 0.9877 0.00 0.00 1.00
#> LT-HSC_069 2 0.0000 0.9748 0.00 1.00 0.00
#> Prog_226 1 0.0000 0.9930 1.00 0.00 0.00
#> Prog_232 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_244 2 0.6126 0.3451 0.00 0.60 0.40
#> LT-HSC_071 2 0.0000 0.9748 0.00 1.00 0.00
#> Prog_222 2 0.0000 0.9748 0.00 1.00 0.00
#> Prog_246 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_252 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_267 1 0.0892 0.9730 0.98 0.02 0.00
#> HSPC_291 3 0.0000 0.9877 0.00 0.00 1.00
#> LT-HSC_075 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_255 2 0.4002 0.7958 0.16 0.84 0.00
#> HSPC_270 2 0.4796 0.7183 0.00 0.78 0.22
#> HSPC_276 2 0.0000 0.9748 0.00 1.00 0.00
#> Prog_259 1 0.0000 0.9930 1.00 0.00 0.00
#> Prog_271 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_277 1 0.0000 0.9930 1.00 0.00 0.00
#> LT-HSC_080 2 0.0000 0.9748 0.00 1.00 0.00
#> Prog_280 3 0.0000 0.9877 0.00 0.00 1.00
#> LT-HSC_082 2 0.0000 0.9748 0.00 1.00 0.00
#> Prog_293 3 0.0000 0.9877 0.00 0.00 1.00
#> LT-HSC_084 3 0.0000 0.9877 0.00 0.00 1.00
#> HSPC_304 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_322 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_298 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_323 1 0.0892 0.9731 0.98 0.02 0.00
#> HSPC_299 3 0.0000 0.9877 0.00 0.00 1.00
#> HSPC_306 3 0.0892 0.9684 0.00 0.02 0.98
#> HSPC_324 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_330 1 0.0000 0.9930 1.00 0.00 0.00
#> LT-HSC_090 2 0.0000 0.9748 0.00 1.00 0.00
#> Prog_314 3 0.4002 0.8044 0.00 0.16 0.84
#> HSPC_349 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_374 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_339 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_359 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_348 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_358 1 0.0000 0.9930 1.00 0.00 0.00
#> Prog_378 2 0.6045 0.3928 0.00 0.62 0.38
#> HSPC_391 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_392 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_398 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_416 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_422 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_380 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_399 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_405 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_418 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_396 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_402 2 0.0000 0.9748 0.00 1.00 0.00
#> Prog_394 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_382 1 0.4002 0.8121 0.84 0.00 0.16
#> Prog_407 3 0.0000 0.9877 0.00 0.00 1.00
#> HSPC_463 2 0.0000 0.9748 0.00 1.00 0.00
#> LT-HSC_110 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_435 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_441 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_447 3 0.0000 0.9877 0.00 0.00 1.00
#> HSPC_453 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_459 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_465 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_448 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_460 1 0.0000 0.9930 1.00 0.00 0.00
#> LT-HSC_112 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_430 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_443 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_449 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_467 1 0.0000 0.9930 1.00 0.00 0.00
#> LT-HSC_113 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_431 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_462 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_468 1 0.0000 0.9930 1.00 0.00 0.00
#> Prog_433 1 0.0000 0.9930 1.00 0.00 0.00
#> Prog_439 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_445 2 0.0000 0.9748 0.00 1.00 0.00
#> Prog_463 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_446 2 0.0000 0.9748 0.00 1.00 0.00
#> Prog_464 2 0.0000 0.9748 0.00 1.00 0.00
#> LT-HSC_116 1 0.0000 0.9930 1.00 0.00 0.00
#> Prog_459 3 0.0000 0.9877 0.00 0.00 1.00
#> LT-HSC_117 1 0.0000 0.9930 1.00 0.00 0.00
#> Prog_448 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_455 1 0.3340 0.8650 0.88 0.00 0.12
#> Prog_467 3 0.6302 0.0647 0.00 0.48 0.52
#> Prog_431 3 0.0000 0.9877 0.00 0.00 1.00
#> HSPC_490 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_496 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_502 2 0.0000 0.9748 0.00 1.00 0.00
#> LT-HSC_124 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_472 2 0.1529 0.9353 0.04 0.96 0.00
#> HSPC_479 1 0.0000 0.9930 1.00 0.00 0.00
#> LT-HSC_125 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_473 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_480 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_492 2 0.5948 0.4477 0.00 0.64 0.36
#> HSPC_498 1 0.0000 0.9930 1.00 0.00 0.00
#> LT-HSC_126 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_474 2 0.0000 0.9748 0.00 1.00 0.00
#> Prog_481 3 0.0000 0.9877 0.00 0.00 1.00
#> LT-HSC_128 1 0.0000 0.9930 1.00 0.00 0.00
#> Prog_495 2 0.0000 0.9748 0.00 1.00 0.00
#> Prog_496 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_509 1 0.0000 0.9930 1.00 0.00 0.00
#> LT-HSC_131 1 0.0000 0.9930 1.00 0.00 0.00
#> Prog_492 1 0.0000 0.9930 1.00 0.00 0.00
#> Prog_474 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_523 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_547 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_512 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_526 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_538 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_514 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_533 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_515 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_534 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_540 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_516 2 0.0000 0.9748 0.00 1.00 0.00
#> Prog_517 3 0.0000 0.9877 0.00 0.00 1.00
#> LT-HSC_139 1 0.0000 0.9930 1.00 0.00 0.00
#> Prog_511 1 0.0000 0.9930 1.00 0.00 0.00
#> Prog_513 3 0.0000 0.9877 0.00 0.00 1.00
#> HSPC_571 1 0.0000 0.9930 1.00 0.00 0.00
#> LT-HSC_146 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_567 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_579 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_580 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_586 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_592 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_556 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_563 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_575 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_557 2 0.0000 0.9748 0.00 1.00 0.00
#> LT-HSC_151 2 0.0000 0.9748 0.00 1.00 0.00
#> Prog_572 2 0.0000 0.9748 0.00 1.00 0.00
#> Prog_554 1 0.0000 0.9930 1.00 0.00 0.00
#> Prog_585 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_555 1 0.0000 0.9930 1.00 0.00 0.00
#> Prog_568 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_580 1 0.0000 0.9930 1.00 0.00 0.00
#> Prog_556 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_564 1 0.0000 0.9930 1.00 0.00 0.00
#> Prog_588 1 0.0000 0.9930 1.00 0.00 0.00
#> Prog_594 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_558 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_595 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_603 2 0.2066 0.9199 0.00 0.94 0.06
#> HSPC_617 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_606 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_612 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_624 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_636 1 0.0000 0.9930 1.00 0.00 0.00
#> Prog_613 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_631 2 0.0000 0.9748 0.00 1.00 0.00
#> LT-HSC_164 1 0.0000 0.9930 1.00 0.00 0.00
#> Prog_596 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_627 1 0.0000 0.9930 1.00 0.00 0.00
#> Prog_597 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_604 3 0.2959 0.8769 0.10 0.00 0.90
#> Prog_610 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_611 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_617 1 0.0000 0.9930 1.00 0.00 0.00
#> Prog_635 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_606 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_649 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_637 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_668 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_674 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_645 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_639 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_646 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_664 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_640 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_671 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_641 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_672 2 0.0000 0.9748 0.00 1.00 0.00
#> LT-HSC_174 1 0.3340 0.8616 0.88 0.12 0.00
#> Prog_644 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_656 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_662 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_674 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_651 1 0.0000 0.9930 1.00 0.00 0.00
#> Prog_676 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_659 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_665 1 0.0000 0.9930 1.00 0.00 0.00
#> Prog_671 1 0.0000 0.9930 1.00 0.00 0.00
#> LT-HSC_179 1 0.0000 0.9930 1.00 0.00 0.00
#> Prog_660 1 0.0000 0.9930 1.00 0.00 0.00
#> Prog_666 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_672 1 0.0000 0.9930 1.00 0.00 0.00
#> Prog_642 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_679 1 0.0000 0.9930 1.00 0.00 0.00
#> LT-HSC_183 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_706 3 0.0000 0.9877 0.00 0.00 1.00
#> LT-HSC_184 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_708 1 0.0000 0.9930 1.00 0.00 0.00
#> LT-HSC_187 1 0.0000 0.9930 1.00 0.00 0.00
#> Prog_692 2 0.0000 0.9748 0.00 1.00 0.00
#> Prog_704 1 0.0000 0.9930 1.00 0.00 0.00
#> Prog_710 1 0.4796 0.7226 0.78 0.00 0.22
#> Prog_716 3 0.0000 0.9877 0.00 0.00 1.00
#> LT-HSC_188 1 0.0000 0.9930 1.00 0.00 0.00
#> Prog_711 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_694 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_689 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_707 3 0.0000 0.9877 0.00 0.00 1.00
#> LT-HSC_191 1 0.0000 0.9930 1.00 0.00 0.00
#> Prog_690 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_684 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_758 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_722 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_729 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_753 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_759 2 0.3340 0.8448 0.12 0.88 0.00
#> LT-HSC_195 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_723 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_730 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_736 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_742 2 0.6244 0.2230 0.44 0.56 0.00
#> HSPC_724 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_743 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_755 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_761 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_732 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_750 1 0.1529 0.9525 0.96 0.04 0.00
#> Prog_733 3 0.2959 0.8831 0.00 0.10 0.90
#> Prog_745 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_751 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_728 2 0.0000 0.9748 0.00 1.00 0.00
#> Prog_740 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_752 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_758 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_747 3 0.0000 0.9877 0.00 0.00 1.00
#> LT-HSC_202 1 0.0000 0.9930 1.00 0.00 0.00
#> Prog_724 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_737 1 0.0000 0.9930 1.00 0.00 0.00
#> Prog_725 1 0.0000 0.9930 1.00 0.00 0.00
#> Prog_738 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_744 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_762 1 0.0000 0.9930 1.00 0.00 0.00
#> LT-HSC_204 2 0.0000 0.9748 0.00 1.00 0.00
#> Prog_726 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_794 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_771 2 0.0892 0.9577 0.00 0.98 0.02
#> HSPC_777 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_795 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_801 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_778 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_784 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_773 2 0.4555 0.7434 0.20 0.80 0.00
#> HSPC_785 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_797 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_774 2 0.4555 0.7489 0.00 0.80 0.20
#> HSPC_780 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_786 1 0.0000 0.9930 1.00 0.00 0.00
#> Prog_775 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_799 3 0.0000 0.9877 0.00 0.00 1.00
#> LT-HSC_212 1 0.0000 0.9930 1.00 0.00 0.00
#> Prog_784 2 0.0000 0.9748 0.00 1.00 0.00
#> LT-HSC_214 1 0.0000 0.9930 1.00 0.00 0.00
#> Prog_785 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_797 1 0.0000 0.9930 1.00 0.00 0.00
#> LT-HSC_215 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_835 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_818 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_824 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_825 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_831 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_843 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_826 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_832 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_838 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_815 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_845 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_822 1 0.0000 0.9930 1.00 0.00 0.00
#> HSPC_828 2 0.0000 0.9748 0.00 1.00 0.00
#> HSPC_834 2 0.2537 0.8911 0.08 0.92 0.00
#> Prog_823 1 0.3340 0.8648 0.88 0.00 0.12
#> Prog_806 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_827 3 0.0000 0.9877 0.00 0.00 1.00
#> Prog_851 3 0.0000 0.9877 0.00 0.00 1.00
cbind(get_classes(res, k = 4), get_membership(res, k = 4))
#> class entropy silhouette p1 p2 p3 p4
#> HSPC_031 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> HSPC_027 3 0.1637 0.84599 0.00 0.00 0.94 0.06
#> HSPC_033 1 0.1637 0.90361 0.94 0.00 0.00 0.06
#> HSPC_028 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> HSPC_040 2 0.0707 0.90907 0.00 0.98 0.00 0.02
#> HSPC_004 1 0.1637 0.90361 0.94 0.00 0.00 0.06
#> HSPC_030 1 0.3400 0.84834 0.82 0.00 0.00 0.18
#> HSPC_042 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> Prog_031 4 0.4624 0.76097 0.00 0.00 0.34 0.66
#> Prog_037 3 0.0000 0.86049 0.00 0.00 1.00 0.00
#> Prog_026 4 0.3975 0.69990 0.00 0.00 0.24 0.76
#> LT-HSC_008 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> Prog_004 4 0.4624 0.76097 0.00 0.00 0.34 0.66
#> HSPC_049 3 0.7414 0.33690 0.18 0.00 0.48 0.34
#> HSPC_080 2 0.7139 0.22097 0.00 0.50 0.36 0.14
#> HSPC_051 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> HSPC_069 2 0.6382 0.57663 0.08 0.58 0.00 0.34
#> HSPC_081 2 0.0707 0.90907 0.00 0.98 0.00 0.02
#> HSPC_058 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> HSPC_070 3 0.1637 0.84599 0.00 0.00 0.94 0.06
#> HSPC_076 2 0.7707 0.17585 0.00 0.44 0.32 0.24
#> HSPC_046 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> HSPC_065 3 0.6104 0.61237 0.00 0.18 0.68 0.14
#> HSPC_054 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> HSPC_060 1 0.2011 0.89688 0.92 0.00 0.00 0.08
#> HSPC_066 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> HSPC_048 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> Prog_073 2 0.2921 0.85836 0.00 0.86 0.00 0.14
#> Prog_068 2 0.7016 0.34006 0.00 0.54 0.32 0.14
#> LT-HSC_020 1 0.3610 0.83631 0.80 0.00 0.00 0.20
#> Prog_044 2 0.0707 0.90907 0.00 0.98 0.00 0.02
#> Prog_072 4 0.4624 0.76097 0.00 0.00 0.34 0.66
#> LT-HSC_024 4 0.4624 0.76097 0.00 0.00 0.34 0.66
#> Prog_048 2 0.0707 0.90907 0.00 0.98 0.00 0.02
#> HSPC_122 1 0.1211 0.90914 0.96 0.00 0.00 0.04
#> HSPC_100 2 0.4277 0.75156 0.00 0.72 0.00 0.28
#> HSPC_118 1 0.3610 0.83631 0.80 0.00 0.00 0.20
#> LT-HSC_028 2 0.2921 0.86176 0.00 0.86 0.00 0.14
#> HSPC_088 2 0.0707 0.90907 0.00 0.98 0.00 0.02
#> HSPC_125 1 0.3172 0.85948 0.84 0.00 0.00 0.16
#> HSPC_089 2 0.1637 0.89702 0.00 0.94 0.00 0.06
#> HSPC_108 1 0.3610 0.83631 0.80 0.00 0.00 0.20
#> HSPC_114 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> HSPC_120 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> HSPC_126 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> LT-HSC_031 2 0.2647 0.87015 0.00 0.88 0.00 0.12
#> Prog_092 3 0.0000 0.86049 0.00 0.00 1.00 0.00
#> Prog_122 4 0.6370 0.69037 0.00 0.10 0.28 0.62
#> LT-HSC_033 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> Prog_106 1 0.3610 0.83631 0.80 0.00 0.00 0.20
#> Prog_124 3 0.0000 0.86049 0.00 0.00 1.00 0.00
#> LT-HSC_034 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> Prog_125 4 0.5489 0.65716 0.24 0.00 0.06 0.70
#> Prog_096 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> Prog_102 1 0.3610 0.83631 0.80 0.00 0.00 0.20
#> LT-HSC_036 4 0.4624 0.76097 0.00 0.00 0.34 0.66
#> HSPC_135 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> HSPC_144 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> HSPC_162 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> Prog_151 2 0.5151 0.76459 0.00 0.76 0.10 0.14
#> Prog_127 2 0.2647 0.87015 0.00 0.88 0.00 0.12
#> Prog_135 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> Prog_142 3 0.2921 0.74795 0.00 0.00 0.86 0.14
#> Prog_154 4 0.4790 0.72811 0.00 0.00 0.38 0.62
#> LT-HSC_046 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> Prog_161 3 0.0000 0.86049 0.00 0.00 1.00 0.00
#> Prog_131 4 0.6201 0.70761 0.00 0.08 0.30 0.62
#> HSPC_193 3 0.0000 0.86049 0.00 0.00 1.00 0.00
#> HSPC_199 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> HSPC_183 3 0.4088 0.77175 0.00 0.04 0.82 0.14
#> HSPC_189 1 0.1637 0.90447 0.94 0.00 0.00 0.06
#> HSPC_207 2 0.2921 0.85836 0.00 0.86 0.00 0.14
#> HSPC_178 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> HSPC_202 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> HSPC_186 3 0.1211 0.81929 0.00 0.00 0.96 0.04
#> HSPC_198 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> HSPC_174 1 0.3610 0.83631 0.80 0.00 0.00 0.20
#> Prog_187 4 0.4948 0.63570 0.00 0.00 0.44 0.56
#> Prog_199 2 0.5677 0.71044 0.00 0.72 0.14 0.14
#> LT-HSC_057 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> Prog_208 4 0.4790 0.72811 0.00 0.00 0.38 0.62
#> LT-HSC_058 2 0.3801 0.67804 0.22 0.78 0.00 0.00
#> Prog_191 4 0.5355 0.72962 0.00 0.02 0.36 0.62
#> Prog_180 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> Prog_210 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> LT-HSC_063 3 0.0000 0.86049 0.00 0.00 1.00 0.00
#> HSPC_244 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> HSPC_221 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> LT-HSC_065 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> HSPC_240 1 0.0707 0.90555 0.98 0.02 0.00 0.00
#> LT-HSC_066 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> Prog_247 4 0.4624 0.76097 0.00 0.00 0.34 0.66
#> Prog_225 4 0.4790 0.72811 0.00 0.00 0.38 0.62
#> LT-HSC_069 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> Prog_226 4 0.4522 0.58021 0.32 0.00 0.00 0.68
#> Prog_232 3 0.1637 0.84599 0.00 0.00 0.94 0.06
#> Prog_244 3 0.5902 0.63720 0.00 0.16 0.70 0.14
#> LT-HSC_071 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> Prog_222 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> Prog_246 3 0.0000 0.86049 0.00 0.00 1.00 0.00
#> Prog_252 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> HSPC_267 1 0.3975 0.80284 0.76 0.00 0.00 0.24
#> HSPC_291 3 0.4406 0.65069 0.00 0.00 0.70 0.30
#> LT-HSC_075 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> HSPC_255 2 0.4277 0.58499 0.28 0.72 0.00 0.00
#> HSPC_270 3 0.5677 0.66288 0.00 0.14 0.72 0.14
#> HSPC_276 2 0.4277 0.75156 0.00 0.72 0.00 0.28
#> Prog_259 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> Prog_271 3 0.0000 0.86049 0.00 0.00 1.00 0.00
#> Prog_277 1 0.1211 0.89142 0.96 0.00 0.00 0.04
#> LT-HSC_080 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> Prog_280 3 0.4522 0.61698 0.00 0.00 0.68 0.32
#> LT-HSC_082 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> Prog_293 3 0.0000 0.86049 0.00 0.00 1.00 0.00
#> LT-HSC_084 3 0.0000 0.86049 0.00 0.00 1.00 0.00
#> HSPC_304 2 0.1637 0.89575 0.00 0.94 0.00 0.06
#> HSPC_322 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> HSPC_298 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> HSPC_323 1 0.3335 0.86246 0.86 0.02 0.00 0.12
#> HSPC_299 3 0.2921 0.80240 0.00 0.00 0.86 0.14
#> HSPC_306 3 0.3606 0.78895 0.00 0.02 0.84 0.14
#> HSPC_324 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> HSPC_330 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> LT-HSC_090 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> Prog_314 3 0.3611 0.79001 0.00 0.08 0.86 0.06
#> HSPC_349 1 0.1637 0.90361 0.94 0.00 0.00 0.06
#> HSPC_374 2 0.2647 0.87047 0.00 0.88 0.00 0.12
#> HSPC_339 2 0.2647 0.87015 0.00 0.88 0.00 0.12
#> HSPC_359 2 0.0707 0.90907 0.00 0.98 0.00 0.02
#> HSPC_348 3 0.1411 0.85010 0.00 0.02 0.96 0.02
#> Prog_358 1 0.2345 0.87514 0.90 0.00 0.00 0.10
#> Prog_378 2 0.3821 0.79377 0.00 0.84 0.12 0.04
#> HSPC_391 1 0.4277 0.76256 0.72 0.00 0.00 0.28
#> HSPC_392 2 0.2921 0.85836 0.00 0.86 0.00 0.14
#> HSPC_398 2 0.2647 0.87015 0.00 0.88 0.00 0.12
#> HSPC_416 1 0.4624 0.68933 0.66 0.00 0.00 0.34
#> HSPC_422 2 0.2921 0.85836 0.00 0.86 0.00 0.14
#> HSPC_380 2 0.4624 0.68450 0.00 0.66 0.00 0.34
#> HSPC_399 1 0.1211 0.90914 0.96 0.00 0.00 0.04
#> HSPC_405 2 0.2921 0.85836 0.00 0.86 0.00 0.14
#> HSPC_418 1 0.4522 0.71515 0.68 0.00 0.00 0.32
#> HSPC_396 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> HSPC_402 2 0.2647 0.87015 0.00 0.88 0.00 0.12
#> Prog_394 4 0.5000 0.50893 0.00 0.00 0.50 0.50
#> Prog_382 4 0.3335 0.59720 0.12 0.00 0.02 0.86
#> Prog_407 3 0.0000 0.86049 0.00 0.00 1.00 0.00
#> HSPC_463 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> LT-HSC_110 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> HSPC_435 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> HSPC_441 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> HSPC_447 3 0.2921 0.80240 0.00 0.00 0.86 0.14
#> HSPC_453 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> HSPC_459 1 0.3610 0.83631 0.80 0.00 0.00 0.20
#> HSPC_465 1 0.1211 0.90914 0.96 0.00 0.00 0.04
#> HSPC_448 1 0.3610 0.83631 0.80 0.00 0.00 0.20
#> HSPC_460 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> LT-HSC_112 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> HSPC_430 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> HSPC_443 1 0.1211 0.90914 0.96 0.00 0.00 0.04
#> HSPC_449 1 0.1211 0.90914 0.96 0.00 0.00 0.04
#> HSPC_467 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> LT-HSC_113 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> HSPC_431 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> HSPC_462 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> HSPC_468 1 0.3400 0.84834 0.82 0.00 0.00 0.18
#> Prog_433 1 0.1211 0.90914 0.96 0.00 0.00 0.04
#> Prog_439 4 0.4790 0.72811 0.00 0.00 0.38 0.62
#> Prog_445 2 0.2647 0.87015 0.00 0.88 0.00 0.12
#> Prog_463 4 0.4624 0.76097 0.00 0.00 0.34 0.66
#> Prog_446 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> Prog_464 2 0.2921 0.81726 0.00 0.86 0.00 0.14
#> LT-HSC_116 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> Prog_459 4 0.5173 0.75809 0.02 0.00 0.32 0.66
#> LT-HSC_117 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> Prog_448 3 0.0000 0.86049 0.00 0.00 1.00 0.00
#> Prog_455 4 0.5820 0.66657 0.24 0.00 0.08 0.68
#> Prog_467 4 0.5173 0.49289 0.00 0.32 0.02 0.66
#> Prog_431 3 0.0000 0.86049 0.00 0.00 1.00 0.00
#> HSPC_490 1 0.3400 0.84878 0.82 0.00 0.00 0.18
#> HSPC_496 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> HSPC_502 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> LT-HSC_124 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> HSPC_472 2 0.6933 0.51222 0.14 0.56 0.00 0.30
#> HSPC_479 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> LT-HSC_125 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> HSPC_473 1 0.2345 0.88904 0.90 0.00 0.00 0.10
#> HSPC_480 2 0.2921 0.85836 0.00 0.86 0.00 0.14
#> HSPC_492 3 0.5428 0.68648 0.00 0.12 0.74 0.14
#> HSPC_498 1 0.3610 0.83631 0.80 0.00 0.00 0.20
#> LT-HSC_126 2 0.1211 0.88624 0.04 0.96 0.00 0.00
#> HSPC_474 2 0.0707 0.90907 0.00 0.98 0.00 0.02
#> Prog_481 3 0.0000 0.86049 0.00 0.00 1.00 0.00
#> LT-HSC_128 1 0.2921 0.78520 0.86 0.14 0.00 0.00
#> Prog_495 2 0.3801 0.78284 0.00 0.78 0.00 0.22
#> Prog_496 4 0.4624 0.76097 0.00 0.00 0.34 0.66
#> Prog_509 4 0.4522 0.58021 0.32 0.00 0.00 0.68
#> LT-HSC_131 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> Prog_492 4 0.4522 0.58021 0.32 0.00 0.00 0.68
#> Prog_474 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> HSPC_523 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> HSPC_547 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> HSPC_512 2 0.2011 0.88835 0.00 0.92 0.00 0.08
#> HSPC_526 1 0.3610 0.83631 0.80 0.00 0.00 0.20
#> HSPC_538 1 0.3610 0.83631 0.80 0.00 0.00 0.20
#> HSPC_514 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> HSPC_533 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> HSPC_515 1 0.1211 0.90914 0.96 0.00 0.00 0.04
#> HSPC_534 1 0.3400 0.84834 0.82 0.00 0.00 0.18
#> HSPC_540 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> HSPC_516 2 0.0707 0.90907 0.00 0.98 0.00 0.02
#> Prog_517 3 0.0000 0.86049 0.00 0.00 1.00 0.00
#> LT-HSC_139 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> Prog_511 4 0.4624 0.60139 0.34 0.00 0.00 0.66
#> Prog_513 4 0.4624 0.76097 0.00 0.00 0.34 0.66
#> HSPC_571 1 0.0707 0.91379 0.98 0.00 0.00 0.02
#> LT-HSC_146 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> HSPC_567 1 0.3610 0.83631 0.80 0.00 0.00 0.20
#> HSPC_579 1 0.0707 0.91372 0.98 0.00 0.00 0.02
#> HSPC_580 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> HSPC_586 2 0.0707 0.90434 0.00 0.98 0.00 0.02
#> HSPC_592 1 0.3610 0.83631 0.80 0.00 0.00 0.20
#> HSPC_556 2 0.0707 0.90872 0.00 0.98 0.00 0.02
#> HSPC_563 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> HSPC_575 1 0.3610 0.83631 0.80 0.00 0.00 0.20
#> HSPC_557 2 0.1211 0.90345 0.00 0.96 0.00 0.04
#> LT-HSC_151 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> Prog_572 2 0.4134 0.77132 0.00 0.74 0.00 0.26
#> Prog_554 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> Prog_585 4 0.4624 0.76097 0.00 0.00 0.34 0.66
#> Prog_555 4 0.4624 0.60139 0.34 0.00 0.00 0.66
#> Prog_568 3 0.3172 0.62166 0.00 0.00 0.84 0.16
#> Prog_580 4 0.5489 0.65716 0.24 0.00 0.06 0.70
#> Prog_556 4 0.4790 0.72811 0.00 0.00 0.38 0.62
#> Prog_564 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> Prog_588 4 0.4624 0.60139 0.34 0.00 0.00 0.66
#> Prog_594 4 0.4907 0.67198 0.00 0.00 0.42 0.58
#> Prog_558 1 0.1211 0.90914 0.96 0.00 0.00 0.04
#> HSPC_595 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> HSPC_603 3 0.6104 0.61237 0.00 0.18 0.68 0.14
#> HSPC_617 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> HSPC_606 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> HSPC_612 1 0.1211 0.90914 0.96 0.00 0.00 0.04
#> HSPC_624 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> HSPC_636 1 0.4522 0.71557 0.68 0.00 0.00 0.32
#> Prog_613 4 0.4624 0.76097 0.00 0.00 0.34 0.66
#> Prog_631 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> LT-HSC_164 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> Prog_596 3 0.0000 0.86049 0.00 0.00 1.00 0.00
#> Prog_627 1 0.2647 0.87983 0.88 0.00 0.00 0.12
#> Prog_597 4 0.4624 0.76097 0.00 0.00 0.34 0.66
#> Prog_604 4 0.6216 0.72363 0.12 0.00 0.22 0.66
#> Prog_610 3 0.3400 0.57800 0.00 0.00 0.82 0.18
#> Prog_611 4 0.4624 0.76097 0.00 0.00 0.34 0.66
#> Prog_617 1 0.3610 0.83631 0.80 0.00 0.00 0.20
#> Prog_635 4 0.4624 0.76097 0.00 0.00 0.34 0.66
#> Prog_606 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> HSPC_649 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> HSPC_637 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> HSPC_668 2 0.2921 0.85836 0.00 0.86 0.00 0.14
#> HSPC_674 1 0.2011 0.89697 0.92 0.00 0.00 0.08
#> HSPC_645 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> HSPC_639 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> HSPC_646 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> HSPC_664 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> HSPC_640 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> HSPC_671 2 0.2647 0.87047 0.00 0.88 0.00 0.12
#> HSPC_641 1 0.1637 0.87376 0.94 0.06 0.00 0.00
#> HSPC_672 2 0.2921 0.85836 0.00 0.86 0.00 0.14
#> LT-HSC_174 1 0.3801 0.66668 0.78 0.22 0.00 0.00
#> Prog_644 3 0.0000 0.86049 0.00 0.00 1.00 0.00
#> Prog_656 3 0.0000 0.86049 0.00 0.00 1.00 0.00
#> Prog_662 3 0.0000 0.86049 0.00 0.00 1.00 0.00
#> Prog_674 3 0.0000 0.86049 0.00 0.00 1.00 0.00
#> Prog_651 4 0.5767 0.64851 0.28 0.00 0.06 0.66
#> Prog_676 4 0.4790 0.72811 0.00 0.00 0.38 0.62
#> Prog_659 3 0.1637 0.84599 0.00 0.00 0.94 0.06
#> Prog_665 1 0.4522 0.71628 0.68 0.00 0.00 0.32
#> Prog_671 4 0.4713 0.56650 0.36 0.00 0.00 0.64
#> LT-HSC_179 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> Prog_660 4 0.5767 0.64851 0.28 0.00 0.06 0.66
#> Prog_666 3 0.0000 0.86049 0.00 0.00 1.00 0.00
#> Prog_672 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> Prog_642 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> HSPC_679 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> LT-HSC_183 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> HSPC_706 3 0.3172 0.78944 0.00 0.00 0.84 0.16
#> LT-HSC_184 1 0.1211 0.90914 0.96 0.00 0.00 0.04
#> HSPC_708 1 0.1211 0.90914 0.96 0.00 0.00 0.04
#> LT-HSC_187 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> Prog_692 2 0.1211 0.90374 0.00 0.96 0.00 0.04
#> Prog_704 1 0.3610 0.83631 0.80 0.00 0.00 0.20
#> Prog_710 4 0.5594 0.68163 0.18 0.00 0.10 0.72
#> Prog_716 4 0.4624 0.76097 0.00 0.00 0.34 0.66
#> LT-HSC_188 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> Prog_711 4 0.4907 0.67356 0.00 0.00 0.42 0.58
#> Prog_694 3 0.0000 0.86049 0.00 0.00 1.00 0.00
#> Prog_689 3 0.0000 0.86049 0.00 0.00 1.00 0.00
#> Prog_707 3 0.0000 0.86049 0.00 0.00 1.00 0.00
#> LT-HSC_191 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> Prog_690 3 0.1637 0.84599 0.00 0.00 0.94 0.06
#> Prog_684 2 0.1637 0.89706 0.00 0.94 0.00 0.06
#> HSPC_758 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> HSPC_722 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> HSPC_729 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> HSPC_753 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> HSPC_759 2 0.7922 0.05622 0.32 0.34 0.00 0.34
#> LT-HSC_195 2 0.0707 0.90113 0.02 0.98 0.00 0.00
#> HSPC_723 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> HSPC_730 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> HSPC_736 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> HSPC_742 2 0.5000 0.03934 0.50 0.50 0.00 0.00
#> HSPC_724 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> HSPC_743 1 0.3610 0.83631 0.80 0.00 0.00 0.20
#> HSPC_755 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> HSPC_761 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> HSPC_732 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> HSPC_750 1 0.4624 0.68933 0.66 0.00 0.00 0.34
#> Prog_733 3 0.4406 0.53491 0.00 0.30 0.70 0.00
#> Prog_745 3 0.2921 0.80240 0.00 0.00 0.86 0.14
#> Prog_751 3 0.0000 0.86049 0.00 0.00 1.00 0.00
#> Prog_728 2 0.5713 0.63411 0.04 0.62 0.00 0.34
#> Prog_740 3 0.0000 0.86049 0.00 0.00 1.00 0.00
#> Prog_752 3 0.0707 0.84206 0.00 0.00 0.98 0.02
#> Prog_758 3 0.0707 0.84206 0.00 0.00 0.98 0.02
#> Prog_747 3 0.2921 0.80240 0.00 0.00 0.86 0.14
#> LT-HSC_202 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> Prog_724 3 0.2921 0.80240 0.00 0.00 0.86 0.14
#> Prog_737 1 0.2345 0.83216 0.90 0.00 0.00 0.10
#> Prog_725 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> Prog_738 3 0.1637 0.84599 0.00 0.00 0.94 0.06
#> Prog_744 3 0.2921 0.80240 0.00 0.00 0.86 0.14
#> Prog_762 1 0.4277 0.76187 0.72 0.00 0.00 0.28
#> LT-HSC_204 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> Prog_726 1 0.0707 0.91358 0.98 0.00 0.00 0.02
#> HSPC_794 2 0.3610 0.80153 0.00 0.80 0.00 0.20
#> HSPC_771 3 0.5271 0.58651 0.00 0.02 0.64 0.34
#> HSPC_777 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> HSPC_795 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> HSPC_801 1 0.3610 0.83631 0.80 0.00 0.00 0.20
#> HSPC_778 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> HSPC_784 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> HSPC_773 1 0.8426 0.00717 0.46 0.34 0.06 0.14
#> HSPC_785 1 0.3172 0.85948 0.84 0.00 0.00 0.16
#> HSPC_797 2 0.0707 0.90907 0.00 0.98 0.00 0.02
#> HSPC_774 3 0.5677 0.66288 0.00 0.14 0.72 0.14
#> HSPC_780 1 0.3610 0.83631 0.80 0.00 0.00 0.20
#> HSPC_786 1 0.3610 0.83631 0.80 0.00 0.00 0.20
#> Prog_775 3 0.0000 0.86049 0.00 0.00 1.00 0.00
#> Prog_799 3 0.0000 0.86049 0.00 0.00 1.00 0.00
#> LT-HSC_212 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> Prog_784 2 0.2647 0.87015 0.00 0.88 0.00 0.12
#> LT-HSC_214 1 0.3610 0.83631 0.80 0.00 0.00 0.20
#> Prog_785 3 0.0000 0.86049 0.00 0.00 1.00 0.00
#> Prog_797 1 0.3610 0.83631 0.80 0.00 0.00 0.20
#> LT-HSC_215 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> HSPC_835 2 0.2647 0.87015 0.00 0.88 0.00 0.12
#> HSPC_818 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> HSPC_824 1 0.3610 0.83631 0.80 0.00 0.00 0.20
#> HSPC_825 1 0.2011 0.89697 0.92 0.00 0.00 0.08
#> HSPC_831 1 0.4522 0.71515 0.68 0.00 0.00 0.32
#> HSPC_843 1 0.3610 0.83631 0.80 0.00 0.00 0.20
#> HSPC_826 1 0.1211 0.90914 0.96 0.00 0.00 0.04
#> HSPC_832 2 0.2921 0.85513 0.00 0.86 0.00 0.14
#> HSPC_838 2 0.0707 0.90907 0.00 0.98 0.00 0.02
#> HSPC_815 2 0.0707 0.90907 0.00 0.98 0.00 0.02
#> HSPC_845 1 0.3610 0.83631 0.80 0.00 0.00 0.20
#> HSPC_822 1 0.0000 0.91719 1.00 0.00 0.00 0.00
#> HSPC_828 2 0.0000 0.91216 0.00 1.00 0.00 0.00
#> HSPC_834 2 0.3801 0.67844 0.22 0.78 0.00 0.00
#> Prog_823 4 0.5863 0.68862 0.18 0.00 0.12 0.70
#> Prog_806 3 0.0000 0.86049 0.00 0.00 1.00 0.00
#> Prog_827 4 0.4624 0.76097 0.00 0.00 0.34 0.66
#> Prog_851 3 0.0000 0.86049 0.00 0.00 1.00 0.00
Heatmaps for the consensus matrix. It visualizes the probability of two samples to be in a same group.
consensus_heatmap(res, k = 2)
consensus_heatmap(res, k = 3)
consensus_heatmap(res, k = 4)
Heatmaps for the membership of samples in all partitions to see how consistent they are:
membership_heatmap(res, k = 2)
membership_heatmap(res, k = 3)
membership_heatmap(res, k = 4)
As soon as the classes for columns are determined, the signatures that are significantly different between subgroups can be looked for. Following are the heatmaps for signatures.
Signature heatmaps where rows are scaled:
Signature heatmaps where rows are not scaled:
get_signatures(res, k = 2, scale_rows = FALSE)
get_signatures(res, k = 3, scale_rows = FALSE)
get_signatures(res, k = 4, scale_rows = FALSE)
Compare the overlap of signatures from different k:
compare_signatures(res)
get_signature() returns a data frame invisibly. To get the list of signatures, the function
call should be assigned to a variable explicitly. In following code, if plot argument is set
to FALSE, no heatmap is plotted while only the differential analysis is performed.
# code only for demonstration
tb = get_signature(res, k = ..., plot = FALSE)
An example of the output of tb is:
#> which_row fdr mean_1 mean_2 scaled_mean_1 scaled_mean_2 km
#> 1 38 0.042760348 8.373488 9.131774 -0.5533452 0.5164555 1
#> 2 40 0.018707592 7.106213 8.469186 -0.6173731 0.5762149 1
#> 3 55 0.019134737 10.221463 11.207825 -0.6159697 0.5749050 1
#> 4 59 0.006059896 5.921854 7.869574 -0.6899429 0.6439467 1
#> 5 60 0.018055526 8.928898 10.211722 -0.6204761 0.5791110 1
#> 6 98 0.009384629 15.714769 14.887706 0.6635654 -0.6193277 2
...
The columns in tb are:
which_row: row indices corresponding to the input matrix.fdr: FDR for the differential test. mean_x: The mean value in group x.scaled_mean_x: The mean value in group x after rows are scaled.km: Row groups if k-means clustering is applied to rows (which is done by automatically selecting number of clusters).If there are too many signatures, top_signatures = ... can be set to only show the
signatures with the highest FDRs:
# code only for demonstration
# e.g. to show the top 500 most significant rows
tb = get_signature(res, k = ..., top_signatures = 500)
If the signatures are defined as these which are uniquely high in current group, diff_method argument
can be set to "uniquely_high_in_one_group":
# code only for demonstration
tb = get_signature(res, k = ..., diff_method = "uniquely_high_in_one_group")
UMAP plot which shows how samples are separated.
dimension_reduction(res, k = 2, method = "UMAP")
dimension_reduction(res, k = 3, method = "UMAP")
dimension_reduction(res, k = 4, method = "UMAP")
Following heatmap shows how subgroups are split when increasing k:
collect_classes(res)
If matrix rows can be associated to genes, consider to use functional_enrichment(res,
...) to perform function enrichment for the signature genes. See this vignette for more detailed explanations.
Parent node: Node03. Child nodes: Node0111 , Node0112 , Node0121 , Node0122 , Node0131 , Node0132-leaf , Node0141-leaf , Node0142-leaf , Node0211 , Node0212 , Node0213-leaf , Node0311-leaf , Node0312-leaf , Node0321-leaf , Node0322-leaf , Node0331-leaf , Node0332-leaf , Node0411-leaf , Node0412-leaf , Node0413-leaf , Node0421-leaf , Node0422-leaf , Node0423-leaf .
The object with results only for a single top-value method and a single partitioning method can be extracted as:
res = res_rh["031"]
A summary of res and all the functions that can be applied to it:
res
#> A 'ConsensusPartition' object with k = 2, 3, 4.
#> On a matrix with 17257 rows and 159 columns.
#> Top rows (1526) are extracted by 'ATC' method.
#> Subgroups are detected by 'skmeans' method.
#> Performed in total 150 partitions by row resampling.
#> Best k for subgroups seems to be 2.
#>
#> Following methods can be applied to this 'ConsensusPartition' object:
#> [1] "cola_report" "collect_classes" "collect_plots"
#> [4] "collect_stats" "colnames" "compare_partitions"
#> [7] "compare_signatures" "consensus_heatmap" "dimension_reduction"
#> [10] "functional_enrichment" "get_anno_col" "get_anno"
#> [13] "get_classes" "get_consensus" "get_matrix"
#> [16] "get_membership" "get_param" "get_signatures"
#> [19] "get_stats" "is_best_k" "is_stable_k"
#> [22] "membership_heatmap" "ncol" "nrow"
#> [25] "plot_ecdf" "predict_classes" "rownames"
#> [28] "select_partition_number" "show" "suggest_best_k"
#> [31] "test_to_known_factors" "top_rows_heatmap"
collect_plots() function collects all the plots made from res for all k (number of subgroups)
into one single page to provide an easy and fast comparison between different k.
collect_plots(res)
The plots are:
k and the heatmap of
predicted classes for each k.k.k.k.All the plots in panels can be made by individual functions and they are plotted later in this section.
select_partition_number() produces several plots showing different
statistics for choosing “optimized” k. There are following statistics:
k;k, the area increased is defined as \(A_k - A_{k-1}\).The detailed explanations of these statistics can be found in the cola vignette.
Generally speaking, higher 1-PAC score, higher mean silhouette score or higher
concordance corresponds to better partition. Rand index and Jaccard index
measure how similar the current partition is compared to partition with k-1.
If they are too similar, we won't accept k is better than k-1.
select_partition_number(res)
The numeric values for all these statistics can be obtained by get_stats().
get_stats(res)
#> k 1-PAC mean_silhouette concordance area_increased Rand Jaccard
#> 2 2 0.947 0.939 0.974 0.503 0.497 0.497
#> 3 3 0.640 0.829 0.901 0.326 0.747 0.533
#> 4 4 0.753 0.804 0.897 0.111 0.692 0.313
suggest_best_k() suggests the best \(k\) based on these statistics. The rules are as follows:
suggest_best_k(res)
#> [1] 2
Following is the table of the partitions (You need to click the show/hide
code output link to see it). The membership matrix (columns with name p*)
is inferred by
clue::cl_consensus()
function with the SE method. Basically the value in the membership matrix
represents the probability to belong to a certain group. The finall subgroup
label for an item is determined with the group with highest probability it
belongs to.
In get_classes() function, the entropy is calculated from the membership
matrix and the silhouette score is calculated from the consensus matrix.
cbind(get_classes(res, k = 2), get_membership(res, k = 2))
#> class entropy silhouette p1 p2
#> HSPC_033 1 0.000 0.9759 1.00 0.00
#> HSPC_028 2 0.000 0.9705 0.00 1.00
#> HSPC_004 1 0.000 0.9759 1.00 0.00
#> HSPC_030 1 0.141 0.9618 0.98 0.02
#> LT-HSC_008 2 0.000 0.9705 0.00 1.00
#> HSPC_049 1 0.141 0.9618 0.98 0.02
#> HSPC_058 1 0.242 0.9457 0.96 0.04
#> HSPC_054 2 0.000 0.9705 0.00 1.00
#> HSPC_060 1 0.958 0.3746 0.62 0.38
#> HSPC_066 1 0.999 0.0408 0.52 0.48
#> LT-HSC_020 1 0.000 0.9759 1.00 0.00
#> HSPC_122 1 0.000 0.9759 1.00 0.00
#> HSPC_118 1 0.000 0.9759 1.00 0.00
#> HSPC_125 1 0.000 0.9759 1.00 0.00
#> HSPC_108 1 0.000 0.9759 1.00 0.00
#> HSPC_120 2 0.000 0.9705 0.00 1.00
#> LT-HSC_033 2 0.000 0.9705 0.00 1.00
#> Prog_106 1 0.000 0.9759 1.00 0.00
#> LT-HSC_034 2 0.000 0.9705 0.00 1.00
#> Prog_125 1 0.242 0.9431 0.96 0.04
#> Prog_102 1 0.000 0.9759 1.00 0.00
#> HSPC_135 2 0.141 0.9556 0.02 0.98
#> HSPC_144 2 0.000 0.9705 0.00 1.00
#> LT-HSC_046 2 0.000 0.9705 0.00 1.00
#> HSPC_199 2 0.000 0.9705 0.00 1.00
#> HSPC_189 1 0.000 0.9759 1.00 0.00
#> HSPC_178 1 0.827 0.6544 0.74 0.26
#> HSPC_198 2 0.000 0.9705 0.00 1.00
#> HSPC_174 1 0.000 0.9759 1.00 0.00
#> LT-HSC_057 2 0.000 0.9705 0.00 1.00
#> HSPC_221 2 0.000 0.9705 0.00 1.00
#> LT-HSC_065 2 0.000 0.9705 0.00 1.00
#> HSPC_240 2 0.000 0.9705 0.00 1.00
#> LT-HSC_066 2 0.141 0.9556 0.02 0.98
#> Prog_226 1 0.000 0.9759 1.00 0.00
#> HSPC_267 1 0.141 0.9618 0.98 0.02
#> LT-HSC_075 2 0.000 0.9705 0.00 1.00
#> Prog_259 2 0.000 0.9705 0.00 1.00
#> Prog_277 2 0.000 0.9705 0.00 1.00
#> HSPC_322 2 0.000 0.9705 0.00 1.00
#> HSPC_323 1 0.242 0.9457 0.96 0.04
#> HSPC_324 2 0.855 0.6147 0.28 0.72
#> HSPC_330 1 0.327 0.9267 0.94 0.06
#> HSPC_349 1 0.000 0.9759 1.00 0.00
#> Prog_358 1 0.000 0.9759 1.00 0.00
#> HSPC_391 1 0.000 0.9759 1.00 0.00
#> HSPC_416 1 0.000 0.9759 1.00 0.00
#> HSPC_399 1 0.000 0.9759 1.00 0.00
#> HSPC_418 1 0.000 0.9759 1.00 0.00
#> Prog_382 1 0.000 0.9759 1.00 0.00
#> LT-HSC_110 2 0.141 0.9556 0.02 0.98
#> HSPC_435 2 0.000 0.9705 0.00 1.00
#> HSPC_441 2 0.000 0.9705 0.00 1.00
#> HSPC_459 1 0.000 0.9759 1.00 0.00
#> HSPC_465 1 0.000 0.9759 1.00 0.00
#> HSPC_448 1 0.000 0.9759 1.00 0.00
#> HSPC_460 2 0.000 0.9705 0.00 1.00
#> HSPC_430 2 0.000 0.9705 0.00 1.00
#> HSPC_443 1 0.000 0.9759 1.00 0.00
#> HSPC_449 1 0.000 0.9759 1.00 0.00
#> HSPC_467 2 0.000 0.9705 0.00 1.00
#> HSPC_431 2 0.000 0.9705 0.00 1.00
#> HSPC_462 2 0.469 0.8805 0.10 0.90
#> HSPC_468 1 0.000 0.9759 1.00 0.00
#> Prog_433 1 0.000 0.9759 1.00 0.00
#> LT-HSC_116 2 0.000 0.9705 0.00 1.00
#> LT-HSC_117 2 0.141 0.9556 0.02 0.98
#> Prog_455 2 0.855 0.6223 0.28 0.72
#> HSPC_490 1 0.000 0.9759 1.00 0.00
#> HSPC_496 2 0.000 0.9705 0.00 1.00
#> LT-HSC_124 2 0.000 0.9705 0.00 1.00
#> HSPC_479 2 0.000 0.9705 0.00 1.00
#> LT-HSC_125 2 0.000 0.9705 0.00 1.00
#> HSPC_473 1 0.141 0.9610 0.98 0.02
#> HSPC_498 1 0.000 0.9759 1.00 0.00
#> LT-HSC_128 2 0.000 0.9705 0.00 1.00
#> Prog_509 1 0.000 0.9759 1.00 0.00
#> LT-HSC_131 2 0.000 0.9705 0.00 1.00
#> Prog_492 1 0.000 0.9759 1.00 0.00
#> HSPC_526 1 0.000 0.9759 1.00 0.00
#> HSPC_538 1 0.000 0.9759 1.00 0.00
#> HSPC_514 2 0.141 0.9556 0.02 0.98
#> HSPC_515 1 0.000 0.9759 1.00 0.00
#> HSPC_534 1 0.000 0.9759 1.00 0.00
#> LT-HSC_139 2 0.000 0.9705 0.00 1.00
#> Prog_511 2 0.000 0.9705 0.00 1.00
#> HSPC_571 1 0.000 0.9759 1.00 0.00
#> LT-HSC_146 2 0.000 0.9705 0.00 1.00
#> HSPC_567 1 0.000 0.9759 1.00 0.00
#> HSPC_579 1 0.141 0.9618 0.98 0.02
#> HSPC_592 1 0.000 0.9759 1.00 0.00
#> HSPC_563 2 0.000 0.9705 0.00 1.00
#> HSPC_575 1 0.000 0.9759 1.00 0.00
#> Prog_554 1 0.402 0.9024 0.92 0.08
#> Prog_555 2 0.402 0.9016 0.08 0.92
#> Prog_580 1 0.722 0.7451 0.80 0.20
#> Prog_564 2 0.000 0.9705 0.00 1.00
#> Prog_588 2 0.000 0.9705 0.00 1.00
#> Prog_558 1 0.000 0.9759 1.00 0.00
#> HSPC_595 2 0.000 0.9705 0.00 1.00
#> HSPC_606 2 0.680 0.7761 0.18 0.82
#> HSPC_612 1 0.000 0.9759 1.00 0.00
#> HSPC_636 1 0.141 0.9618 0.98 0.02
#> LT-HSC_164 2 0.000 0.9705 0.00 1.00
#> Prog_627 1 0.000 0.9759 1.00 0.00
#> Prog_617 1 0.000 0.9759 1.00 0.00
#> Prog_606 2 0.000 0.9705 0.00 1.00
#> HSPC_637 2 0.000 0.9705 0.00 1.00
#> HSPC_674 1 0.000 0.9759 1.00 0.00
#> HSPC_639 2 0.000 0.9705 0.00 1.00
#> HSPC_646 2 0.000 0.9705 0.00 1.00
#> HSPC_640 2 0.000 0.9705 0.00 1.00
#> HSPC_641 2 0.000 0.9705 0.00 1.00
#> LT-HSC_174 2 0.000 0.9705 0.00 1.00
#> Prog_651 2 0.000 0.9705 0.00 1.00
#> Prog_665 1 0.000 0.9759 1.00 0.00
#> Prog_671 2 0.000 0.9705 0.00 1.00
#> LT-HSC_179 2 0.000 0.9705 0.00 1.00
#> Prog_660 2 0.000 0.9705 0.00 1.00
#> Prog_672 2 0.000 0.9705 0.00 1.00
#> HSPC_679 2 0.000 0.9705 0.00 1.00
#> LT-HSC_183 2 0.000 0.9705 0.00 1.00
#> LT-HSC_184 1 0.000 0.9759 1.00 0.00
#> HSPC_708 1 0.000 0.9759 1.00 0.00
#> LT-HSC_187 2 0.000 0.9705 0.00 1.00
#> Prog_704 1 0.000 0.9759 1.00 0.00
#> Prog_710 1 0.000 0.9759 1.00 0.00
#> LT-HSC_188 2 0.990 0.2332 0.44 0.56
#> LT-HSC_191 2 0.000 0.9705 0.00 1.00
#> HSPC_722 2 0.000 0.9705 0.00 1.00
#> HSPC_729 2 0.000 0.9705 0.00 1.00
#> HSPC_753 2 0.981 0.2722 0.42 0.58
#> HSPC_730 1 0.141 0.9618 0.98 0.02
#> HSPC_743 1 0.000 0.9759 1.00 0.00
#> HSPC_755 2 0.000 0.9705 0.00 1.00
#> HSPC_750 1 0.000 0.9759 1.00 0.00
#> LT-HSC_202 2 0.000 0.9705 0.00 1.00
#> Prog_737 2 0.141 0.9556 0.02 0.98
#> Prog_725 1 0.634 0.8097 0.84 0.16
#> Prog_762 1 0.000 0.9759 1.00 0.00
#> Prog_726 1 0.000 0.9759 1.00 0.00
#> HSPC_801 1 0.000 0.9759 1.00 0.00
#> HSPC_778 2 0.000 0.9705 0.00 1.00
#> HSPC_784 2 0.855 0.6269 0.28 0.72
#> HSPC_785 1 0.000 0.9759 1.00 0.00
#> HSPC_780 1 0.000 0.9759 1.00 0.00
#> HSPC_786 1 0.000 0.9759 1.00 0.00
#> LT-HSC_212 2 0.000 0.9705 0.00 1.00
#> LT-HSC_214 1 0.000 0.9759 1.00 0.00
#> Prog_797 1 0.000 0.9759 1.00 0.00
#> HSPC_818 2 0.000 0.9705 0.00 1.00
#> HSPC_824 1 0.000 0.9759 1.00 0.00
#> HSPC_825 1 0.000 0.9759 1.00 0.00
#> HSPC_831 1 0.000 0.9759 1.00 0.00
#> HSPC_843 1 0.000 0.9759 1.00 0.00
#> HSPC_826 1 0.000 0.9759 1.00 0.00
#> HSPC_845 1 0.000 0.9759 1.00 0.00
#> HSPC_822 2 0.000 0.9705 0.00 1.00
#> Prog_823 1 0.000 0.9759 1.00 0.00
cbind(get_classes(res, k = 3), get_membership(res, k = 3))
#> class entropy silhouette p1 p2 p3
#> HSPC_033 1 0.0000 0.8916 1.00 0.00 0.00
#> HSPC_028 2 0.0892 0.9080 0.00 0.98 0.02
#> HSPC_004 1 0.1529 0.8788 0.96 0.04 0.00
#> HSPC_030 1 0.3340 0.8440 0.88 0.12 0.00
#> LT-HSC_008 2 0.3686 0.9041 0.00 0.86 0.14
#> HSPC_049 1 0.3340 0.8440 0.88 0.12 0.00
#> HSPC_058 1 0.5416 0.8059 0.82 0.08 0.10
#> HSPC_054 2 0.0000 0.9126 0.00 1.00 0.00
#> HSPC_060 1 0.8310 0.0973 0.50 0.42 0.08
#> HSPC_066 3 0.1781 0.8763 0.02 0.02 0.96
#> LT-HSC_020 1 0.0000 0.8916 1.00 0.00 0.00
#> HSPC_122 3 0.5216 0.7437 0.26 0.00 0.74
#> HSPC_118 1 0.0000 0.8916 1.00 0.00 0.00
#> HSPC_125 1 0.0000 0.8916 1.00 0.00 0.00
#> HSPC_108 1 0.0000 0.8916 1.00 0.00 0.00
#> HSPC_120 2 0.3340 0.9093 0.00 0.88 0.12
#> LT-HSC_033 2 0.3340 0.9093 0.00 0.88 0.12
#> Prog_106 1 0.3340 0.7857 0.88 0.00 0.12
#> LT-HSC_034 3 0.0892 0.8735 0.00 0.02 0.98
#> Prog_125 3 0.3415 0.8764 0.08 0.02 0.90
#> Prog_102 1 0.0000 0.8916 1.00 0.00 0.00
#> HSPC_135 3 0.0892 0.8735 0.00 0.02 0.98
#> HSPC_144 2 0.0892 0.9080 0.00 0.98 0.02
#> LT-HSC_046 2 0.2959 0.9176 0.00 0.90 0.10
#> HSPC_199 2 0.2537 0.9213 0.00 0.92 0.08
#> HSPC_189 3 0.6302 0.2517 0.48 0.00 0.52
#> HSPC_178 1 0.3686 0.8300 0.86 0.14 0.00
#> HSPC_198 2 0.0000 0.9126 0.00 1.00 0.00
#> HSPC_174 1 0.0000 0.8916 1.00 0.00 0.00
#> LT-HSC_057 2 0.3340 0.9093 0.00 0.88 0.12
#> HSPC_221 2 0.3340 0.9093 0.00 0.88 0.12
#> LT-HSC_065 2 0.2537 0.9213 0.00 0.92 0.08
#> HSPC_240 2 0.0000 0.9126 0.00 1.00 0.00
#> LT-HSC_066 3 0.0892 0.8735 0.00 0.02 0.98
#> Prog_226 3 0.3415 0.8764 0.08 0.02 0.90
#> HSPC_267 1 0.3340 0.8440 0.88 0.12 0.00
#> LT-HSC_075 2 0.2959 0.9143 0.00 0.90 0.10
#> Prog_259 2 0.0892 0.9080 0.00 0.98 0.02
#> Prog_277 2 0.1529 0.9098 0.00 0.96 0.04
#> HSPC_322 2 0.2537 0.9213 0.00 0.92 0.08
#> HSPC_323 1 0.3340 0.8440 0.88 0.12 0.00
#> HSPC_324 1 0.6309 0.1532 0.50 0.50 0.00
#> HSPC_330 1 0.3340 0.8440 0.88 0.12 0.00
#> HSPC_349 3 0.3340 0.8701 0.12 0.00 0.88
#> Prog_358 3 0.2959 0.8759 0.10 0.00 0.90
#> HSPC_391 1 0.0000 0.8916 1.00 0.00 0.00
#> HSPC_416 1 0.0000 0.8916 1.00 0.00 0.00
#> HSPC_399 3 0.3415 0.8795 0.08 0.02 0.90
#> HSPC_418 1 0.0000 0.8916 1.00 0.00 0.00
#> Prog_382 3 0.5835 0.6125 0.34 0.00 0.66
#> LT-HSC_110 3 0.0892 0.8735 0.00 0.02 0.98
#> HSPC_435 2 0.0892 0.9080 0.00 0.98 0.02
#> HSPC_441 2 0.2537 0.9213 0.00 0.92 0.08
#> HSPC_459 1 0.0000 0.8916 1.00 0.00 0.00
#> HSPC_465 3 0.3340 0.8713 0.12 0.00 0.88
#> HSPC_448 1 0.0000 0.8916 1.00 0.00 0.00
#> HSPC_460 2 0.3340 0.9093 0.00 0.88 0.12
#> HSPC_430 2 0.1529 0.9098 0.00 0.96 0.04
#> HSPC_443 1 0.6309 -0.2091 0.50 0.00 0.50
#> HSPC_449 3 0.5706 0.6505 0.32 0.00 0.68
#> HSPC_467 2 0.0892 0.9080 0.00 0.98 0.02
#> HSPC_431 2 0.2537 0.9223 0.00 0.92 0.08
#> HSPC_462 2 0.6793 0.7693 0.16 0.74 0.10
#> HSPC_468 1 0.0000 0.8916 1.00 0.00 0.00
#> Prog_433 3 0.3340 0.8701 0.12 0.00 0.88
#> LT-HSC_116 3 0.0000 0.8736 0.00 0.00 1.00
#> LT-HSC_117 3 0.0892 0.8735 0.00 0.02 0.98
#> Prog_455 3 0.3572 0.8732 0.06 0.04 0.90
#> HSPC_490 1 0.6045 0.2419 0.62 0.00 0.38
#> HSPC_496 2 0.6126 0.5467 0.00 0.60 0.40
#> LT-HSC_124 2 0.3340 0.9093 0.00 0.88 0.12
#> HSPC_479 2 0.0892 0.9080 0.00 0.98 0.02
#> LT-HSC_125 2 0.2959 0.9143 0.00 0.90 0.10
#> HSPC_473 1 0.7029 0.0631 0.54 0.02 0.44
#> HSPC_498 1 0.0000 0.8916 1.00 0.00 0.00
#> LT-HSC_128 2 0.1529 0.9213 0.00 0.96 0.04
#> Prog_509 3 0.3340 0.8701 0.12 0.00 0.88
#> LT-HSC_131 2 0.3340 0.9093 0.00 0.88 0.12
#> Prog_492 3 0.3340 0.8701 0.12 0.00 0.88
#> HSPC_526 1 0.0000 0.8916 1.00 0.00 0.00
#> HSPC_538 1 0.2537 0.8297 0.92 0.00 0.08
#> HSPC_514 3 0.0892 0.8735 0.00 0.02 0.98
#> HSPC_515 1 0.0000 0.8916 1.00 0.00 0.00
#> HSPC_534 1 0.0000 0.8916 1.00 0.00 0.00
#> LT-HSC_139 2 0.2537 0.9223 0.00 0.92 0.08
#> Prog_511 2 0.0892 0.9080 0.00 0.98 0.02
#> HSPC_571 1 0.3340 0.8440 0.88 0.12 0.00
#> LT-HSC_146 2 0.4796 0.8195 0.00 0.78 0.22
#> HSPC_567 1 0.2537 0.8636 0.92 0.08 0.00
#> HSPC_579 1 0.3340 0.8440 0.88 0.12 0.00
#> HSPC_592 1 0.0000 0.8916 1.00 0.00 0.00
#> HSPC_563 2 0.1529 0.9098 0.00 0.96 0.04
#> HSPC_575 1 0.0000 0.8916 1.00 0.00 0.00
#> Prog_554 1 0.4555 0.7765 0.80 0.20 0.00
#> Prog_555 3 0.5397 0.6385 0.00 0.28 0.72
#> Prog_580 3 0.3572 0.8655 0.04 0.06 0.90
#> Prog_564 2 0.2537 0.9213 0.00 0.92 0.08
#> Prog_588 2 0.1529 0.9098 0.00 0.96 0.04
#> Prog_558 3 0.5016 0.7716 0.24 0.00 0.76
#> HSPC_595 2 0.2959 0.9192 0.00 0.90 0.10
#> HSPC_606 2 0.3340 0.8076 0.12 0.88 0.00
#> HSPC_612 1 0.2959 0.8112 0.90 0.00 0.10
#> HSPC_636 1 0.3340 0.8440 0.88 0.12 0.00
#> LT-HSC_164 2 0.3340 0.9093 0.00 0.88 0.12
#> Prog_627 1 0.1529 0.8648 0.96 0.00 0.04
#> Prog_617 1 0.0000 0.8916 1.00 0.00 0.00
#> Prog_606 2 0.3686 0.9041 0.00 0.86 0.14
#> HSPC_637 2 0.0000 0.9126 0.00 1.00 0.00
#> HSPC_674 1 0.0000 0.8916 1.00 0.00 0.00
#> HSPC_639 2 0.2537 0.9223 0.00 0.92 0.08
#> HSPC_646 2 0.0000 0.9126 0.00 1.00 0.00
#> HSPC_640 2 0.2537 0.9213 0.00 0.92 0.08
#> HSPC_641 2 0.2066 0.9226 0.00 0.94 0.06
#> LT-HSC_174 2 0.2537 0.9213 0.00 0.92 0.08
#> Prog_651 2 0.1529 0.9098 0.00 0.96 0.04
#> Prog_665 1 0.2959 0.8540 0.90 0.10 0.00
#> Prog_671 2 0.5016 0.6932 0.00 0.76 0.24
#> LT-HSC_179 2 0.2537 0.9213 0.00 0.92 0.08
#> Prog_660 2 0.1529 0.9098 0.00 0.96 0.04
#> Prog_672 2 0.0000 0.9126 0.00 1.00 0.00
#> HSPC_679 3 0.2066 0.8620 0.00 0.06 0.94
#> LT-HSC_183 3 0.0892 0.8735 0.00 0.02 0.98
#> LT-HSC_184 3 0.2959 0.8770 0.10 0.00 0.90
#> HSPC_708 3 0.3340 0.8713 0.12 0.00 0.88
#> LT-HSC_187 3 0.0892 0.8735 0.00 0.02 0.98
#> Prog_704 1 0.0000 0.8916 1.00 0.00 0.00
#> Prog_710 3 0.3340 0.8701 0.12 0.00 0.88
#> LT-HSC_188 3 0.1781 0.8763 0.02 0.02 0.96
#> LT-HSC_191 3 0.0892 0.8735 0.00 0.02 0.98
#> HSPC_722 2 0.3340 0.9143 0.00 0.88 0.12
#> HSPC_729 2 0.2537 0.9213 0.00 0.92 0.08
#> HSPC_753 2 0.6302 -0.1046 0.48 0.52 0.00
#> HSPC_730 1 0.3340 0.8440 0.88 0.12 0.00
#> HSPC_743 1 0.0000 0.8916 1.00 0.00 0.00
#> HSPC_755 2 0.0000 0.9126 0.00 1.00 0.00
#> HSPC_750 1 0.0892 0.8852 0.98 0.02 0.00
#> LT-HSC_202 3 0.4291 0.6659 0.00 0.18 0.82
#> Prog_737 3 0.2959 0.8431 0.00 0.10 0.90
#> Prog_725 1 0.4796 0.7537 0.78 0.22 0.00
#> Prog_762 1 0.2537 0.8636 0.92 0.08 0.00
#> Prog_726 3 0.2959 0.8759 0.10 0.00 0.90
#> HSPC_801 1 0.0000 0.8916 1.00 0.00 0.00
#> HSPC_778 3 0.0892 0.8722 0.00 0.02 0.98
#> HSPC_784 3 0.2414 0.8797 0.04 0.02 0.94
#> HSPC_785 1 0.6045 0.2436 0.62 0.00 0.38
#> HSPC_780 1 0.0000 0.8916 1.00 0.00 0.00
#> HSPC_786 1 0.3686 0.7601 0.86 0.00 0.14
#> LT-HSC_212 3 0.2959 0.8089 0.00 0.10 0.90
#> LT-HSC_214 3 0.6229 0.6321 0.28 0.02 0.70
#> Prog_797 1 0.0000 0.8916 1.00 0.00 0.00
#> HSPC_818 2 0.2537 0.9213 0.00 0.92 0.08
#> HSPC_824 3 0.5016 0.7734 0.24 0.00 0.76
#> HSPC_825 3 0.4796 0.7930 0.22 0.00 0.78
#> HSPC_831 1 0.0000 0.8916 1.00 0.00 0.00
#> HSPC_843 1 0.0000 0.8916 1.00 0.00 0.00
#> HSPC_826 3 0.3340 0.8713 0.12 0.00 0.88
#> HSPC_845 1 0.0000 0.8916 1.00 0.00 0.00
#> HSPC_822 3 0.0892 0.8735 0.00 0.02 0.98
#> Prog_823 3 0.3340 0.8701 0.12 0.00 0.88
cbind(get_classes(res, k = 4), get_membership(res, k = 4))
#> class entropy silhouette p1 p2 p3 p4
#> HSPC_033 1 0.0000 0.9279 1.00 0.00 0.00 0.00
#> HSPC_028 4 0.0000 0.8619 0.00 0.00 0.00 1.00
#> HSPC_004 1 0.6831 -0.0968 0.48 0.00 0.10 0.42
#> HSPC_030 4 0.2345 0.8573 0.10 0.00 0.00 0.90
#> LT-HSC_008 3 0.4284 0.7452 0.00 0.20 0.78 0.02
#> HSPC_049 4 0.2345 0.8573 0.10 0.00 0.00 0.90
#> HSPC_058 4 0.6317 0.6730 0.22 0.02 0.08 0.68
#> HSPC_054 4 0.0000 0.8619 0.00 0.00 0.00 1.00
#> HSPC_060 2 0.6089 0.6553 0.08 0.64 0.00 0.28
#> HSPC_066 2 0.0000 0.8132 0.00 1.00 0.00 0.00
#> LT-HSC_020 1 0.0000 0.9279 1.00 0.00 0.00 0.00
#> HSPC_122 1 0.2011 0.8880 0.92 0.08 0.00 0.00
#> HSPC_118 1 0.0000 0.9279 1.00 0.00 0.00 0.00
#> HSPC_125 1 0.0000 0.9279 1.00 0.00 0.00 0.00
#> HSPC_108 1 0.0000 0.9279 1.00 0.00 0.00 0.00
#> HSPC_120 2 0.2011 0.8210 0.00 0.92 0.00 0.08
#> LT-HSC_033 2 0.2011 0.8210 0.00 0.92 0.00 0.08
#> Prog_106 1 0.0000 0.9279 1.00 0.00 0.00 0.00
#> LT-HSC_034 2 0.0000 0.8132 0.00 1.00 0.00 0.00
#> Prog_125 3 0.0000 0.9199 0.00 0.00 1.00 0.00
#> Prog_102 1 0.0000 0.9279 1.00 0.00 0.00 0.00
#> HSPC_135 2 0.0000 0.8132 0.00 1.00 0.00 0.00
#> HSPC_144 4 0.0000 0.8619 0.00 0.00 0.00 1.00
#> LT-HSC_046 2 0.4713 0.6564 0.00 0.64 0.00 0.36
#> HSPC_199 4 0.4907 -0.1502 0.00 0.42 0.00 0.58
#> HSPC_189 1 0.1211 0.9112 0.96 0.04 0.00 0.00
#> HSPC_178 4 0.2011 0.8618 0.08 0.00 0.00 0.92
#> HSPC_198 4 0.0000 0.8619 0.00 0.00 0.00 1.00
#> HSPC_174 1 0.1637 0.8778 0.94 0.00 0.00 0.06
#> LT-HSC_057 2 0.2345 0.8190 0.00 0.90 0.00 0.10
#> HSPC_221 2 0.1637 0.8216 0.00 0.94 0.00 0.06
#> LT-HSC_065 2 0.4713 0.6564 0.00 0.64 0.00 0.36
#> HSPC_240 4 0.0000 0.8619 0.00 0.00 0.00 1.00
#> LT-HSC_066 2 0.0000 0.8132 0.00 1.00 0.00 0.00
#> Prog_226 3 0.0000 0.9199 0.00 0.00 1.00 0.00
#> HSPC_267 4 0.2647 0.8455 0.12 0.00 0.00 0.88
#> LT-HSC_075 2 0.3172 0.7997 0.00 0.84 0.00 0.16
#> Prog_259 4 0.0707 0.8551 0.00 0.00 0.02 0.98
#> Prog_277 3 0.0000 0.9199 0.00 0.00 1.00 0.00
#> HSPC_322 2 0.4790 0.6321 0.00 0.62 0.00 0.38
#> HSPC_323 4 0.2345 0.8573 0.10 0.00 0.00 0.90
#> HSPC_324 4 0.0707 0.8642 0.02 0.00 0.00 0.98
#> HSPC_330 4 0.2345 0.8573 0.10 0.00 0.00 0.90
#> HSPC_349 3 0.0000 0.9199 0.00 0.00 1.00 0.00
#> Prog_358 3 0.0000 0.9199 0.00 0.00 1.00 0.00
#> HSPC_391 1 0.0000 0.9279 1.00 0.00 0.00 0.00
#> HSPC_416 1 0.0000 0.9279 1.00 0.00 0.00 0.00
#> HSPC_399 2 0.4522 0.3671 0.32 0.68 0.00 0.00
#> HSPC_418 1 0.0000 0.9279 1.00 0.00 0.00 0.00
#> Prog_382 1 0.2647 0.8428 0.88 0.00 0.12 0.00
#> LT-HSC_110 2 0.0000 0.8132 0.00 1.00 0.00 0.00
#> HSPC_435 4 0.0000 0.8619 0.00 0.00 0.00 1.00
#> HSPC_441 2 0.4790 0.6321 0.00 0.62 0.00 0.38
#> HSPC_459 1 0.0000 0.9279 1.00 0.00 0.00 0.00
#> HSPC_465 1 0.4713 0.5458 0.64 0.36 0.00 0.00
#> HSPC_448 1 0.0000 0.9279 1.00 0.00 0.00 0.00
#> HSPC_460 2 0.2011 0.8210 0.00 0.92 0.00 0.08
#> HSPC_430 3 0.6366 0.5848 0.00 0.12 0.64 0.24
#> HSPC_443 1 0.2011 0.8872 0.92 0.08 0.00 0.00
#> HSPC_449 1 0.1637 0.9008 0.94 0.06 0.00 0.00
#> HSPC_467 4 0.0000 0.8619 0.00 0.00 0.00 1.00
#> HSPC_431 2 0.4713 0.6564 0.00 0.64 0.00 0.36
#> HSPC_462 2 0.2647 0.8157 0.00 0.88 0.00 0.12
#> HSPC_468 1 0.0000 0.9279 1.00 0.00 0.00 0.00
#> Prog_433 3 0.0000 0.9199 0.00 0.00 1.00 0.00
#> LT-HSC_116 3 0.2921 0.8323 0.00 0.14 0.86 0.00
#> LT-HSC_117 2 0.0000 0.8132 0.00 1.00 0.00 0.00
#> Prog_455 3 0.0000 0.9199 0.00 0.00 1.00 0.00
#> HSPC_490 1 0.1637 0.9008 0.94 0.06 0.00 0.00
#> HSPC_496 2 0.1913 0.8154 0.00 0.94 0.02 0.04
#> LT-HSC_124 2 0.1211 0.8192 0.00 0.96 0.00 0.04
#> HSPC_479 4 0.0000 0.8619 0.00 0.00 0.00 1.00
#> LT-HSC_125 2 0.2921 0.8075 0.00 0.86 0.00 0.14
#> HSPC_473 2 0.4948 0.0413 0.44 0.56 0.00 0.00
#> HSPC_498 1 0.0000 0.9279 1.00 0.00 0.00 0.00
#> LT-HSC_128 4 0.2921 0.6833 0.00 0.14 0.00 0.86
#> Prog_509 3 0.0000 0.9199 0.00 0.00 1.00 0.00
#> LT-HSC_131 2 0.2011 0.8215 0.00 0.92 0.00 0.08
#> Prog_492 3 0.0000 0.9199 0.00 0.00 1.00 0.00
#> HSPC_526 1 0.0000 0.9279 1.00 0.00 0.00 0.00
#> HSPC_538 1 0.1637 0.9008 0.94 0.06 0.00 0.00
#> HSPC_514 2 0.0000 0.8132 0.00 1.00 0.00 0.00
#> HSPC_515 1 0.4134 0.5745 0.74 0.00 0.00 0.26
#> HSPC_534 1 0.0000 0.9279 1.00 0.00 0.00 0.00
#> LT-HSC_139 2 0.4713 0.6564 0.00 0.64 0.00 0.36
#> Prog_511 3 0.0000 0.9199 0.00 0.00 1.00 0.00
#> HSPC_571 4 0.3172 0.8169 0.16 0.00 0.00 0.84
#> LT-HSC_146 2 0.0707 0.8171 0.00 0.98 0.00 0.02
#> HSPC_567 4 0.4713 0.5231 0.36 0.00 0.00 0.64
#> HSPC_579 4 0.3975 0.7295 0.24 0.00 0.00 0.76
#> HSPC_592 1 0.0000 0.9279 1.00 0.00 0.00 0.00
#> HSPC_563 4 0.0000 0.8619 0.00 0.00 0.00 1.00
#> HSPC_575 1 0.0000 0.9279 1.00 0.00 0.00 0.00
#> Prog_554 4 0.3853 0.8026 0.16 0.00 0.02 0.82
#> Prog_555 3 0.0000 0.9199 0.00 0.00 1.00 0.00
#> Prog_580 3 0.0000 0.9199 0.00 0.00 1.00 0.00
#> Prog_564 2 0.4790 0.6321 0.00 0.62 0.00 0.38
#> Prog_588 3 0.0707 0.9093 0.00 0.00 0.98 0.02
#> Prog_558 1 0.3335 0.8353 0.86 0.02 0.12 0.00
#> HSPC_595 3 0.5077 0.7302 0.00 0.16 0.76 0.08
#> HSPC_606 4 0.0707 0.8586 0.00 0.00 0.02 0.98
#> HSPC_612 1 0.0000 0.9279 1.00 0.00 0.00 0.00
#> HSPC_636 4 0.2345 0.8573 0.10 0.00 0.00 0.90
#> LT-HSC_164 2 0.2345 0.8190 0.00 0.90 0.00 0.10
#> Prog_627 1 0.0000 0.9279 1.00 0.00 0.00 0.00
#> Prog_617 1 0.0000 0.9279 1.00 0.00 0.00 0.00
#> Prog_606 3 0.5392 0.6349 0.00 0.28 0.68 0.04
#> HSPC_637 4 0.0000 0.8619 0.00 0.00 0.00 1.00
#> HSPC_674 1 0.0000 0.9279 1.00 0.00 0.00 0.00
#> HSPC_639 2 0.4713 0.6564 0.00 0.64 0.00 0.36
#> HSPC_646 4 0.0000 0.8619 0.00 0.00 0.00 1.00
#> HSPC_640 2 0.4790 0.6321 0.00 0.62 0.00 0.38
#> HSPC_641 2 0.4790 0.6321 0.00 0.62 0.00 0.38
#> LT-HSC_174 2 0.4713 0.6564 0.00 0.64 0.00 0.36
#> Prog_651 3 0.0000 0.9199 0.00 0.00 1.00 0.00
#> Prog_665 4 0.6074 0.5125 0.34 0.00 0.06 0.60
#> Prog_671 3 0.0000 0.9199 0.00 0.00 1.00 0.00
#> LT-HSC_179 2 0.4790 0.6321 0.00 0.62 0.00 0.38
#> Prog_660 3 0.1211 0.8963 0.00 0.00 0.96 0.04
#> Prog_672 4 0.0000 0.8619 0.00 0.00 0.00 1.00
#> HSPC_679 3 0.0707 0.9113 0.00 0.02 0.98 0.00
#> LT-HSC_183 2 0.0000 0.8132 0.00 1.00 0.00 0.00
#> LT-HSC_184 1 0.4713 0.5458 0.64 0.36 0.00 0.00
#> HSPC_708 1 0.4713 0.5458 0.64 0.36 0.00 0.00
#> LT-HSC_187 2 0.0000 0.8132 0.00 1.00 0.00 0.00
#> Prog_704 1 0.0000 0.9279 1.00 0.00 0.00 0.00
#> Prog_710 3 0.0000 0.9199 0.00 0.00 1.00 0.00
#> LT-HSC_188 2 0.0000 0.8132 0.00 1.00 0.00 0.00
#> LT-HSC_191 2 0.0000 0.8132 0.00 1.00 0.00 0.00
#> HSPC_722 3 0.6605 0.1145 0.00 0.44 0.48 0.08
#> HSPC_729 2 0.4277 0.7257 0.00 0.72 0.00 0.28
#> HSPC_753 4 0.2011 0.8616 0.08 0.00 0.00 0.92
#> HSPC_730 4 0.2345 0.8573 0.10 0.00 0.00 0.90
#> HSPC_743 1 0.0000 0.9279 1.00 0.00 0.00 0.00
#> HSPC_755 4 0.0000 0.8619 0.00 0.00 0.00 1.00
#> HSPC_750 1 0.1637 0.8779 0.94 0.00 0.00 0.06
#> LT-HSC_202 3 0.4406 0.6560 0.00 0.30 0.70 0.00
#> Prog_737 3 0.0000 0.9199 0.00 0.00 1.00 0.00
#> Prog_725 4 0.1637 0.8636 0.06 0.00 0.00 0.94
#> Prog_762 4 0.4713 0.5231 0.36 0.00 0.00 0.64
#> Prog_726 3 0.0000 0.9199 0.00 0.00 1.00 0.00
#> HSPC_801 1 0.0000 0.9279 1.00 0.00 0.00 0.00
#> HSPC_778 3 0.1637 0.8921 0.00 0.06 0.94 0.00
#> HSPC_784 2 0.0000 0.8132 0.00 1.00 0.00 0.00
#> HSPC_785 1 0.1211 0.9112 0.96 0.04 0.00 0.00
#> HSPC_780 1 0.0000 0.9279 1.00 0.00 0.00 0.00
#> HSPC_786 1 0.1637 0.9008 0.94 0.06 0.00 0.00
#> LT-HSC_212 2 0.0000 0.8132 0.00 1.00 0.00 0.00
#> LT-HSC_214 2 0.2345 0.7445 0.10 0.90 0.00 0.00
#> Prog_797 1 0.0000 0.9279 1.00 0.00 0.00 0.00
#> HSPC_818 2 0.3610 0.7790 0.00 0.80 0.00 0.20
#> HSPC_824 1 0.2345 0.8721 0.90 0.10 0.00 0.00
#> HSPC_825 1 0.1637 0.9008 0.94 0.06 0.00 0.00
#> HSPC_831 1 0.0000 0.9279 1.00 0.00 0.00 0.00
#> HSPC_843 1 0.0000 0.9279 1.00 0.00 0.00 0.00
#> HSPC_826 1 0.4713 0.5458 0.64 0.36 0.00 0.00
#> HSPC_845 1 0.0000 0.9279 1.00 0.00 0.00 0.00
#> HSPC_822 2 0.0000 0.8132 0.00 1.00 0.00 0.00
#> Prog_823 3 0.0000 0.9199 0.00 0.00 1.00 0.00
Heatmaps for the consensus matrix. It visualizes the probability of two samples to be in a same group.
consensus_heatmap(res, k = 2)
consensus_heatmap(res, k = 3)
consensus_heatmap(res, k = 4)
Heatmaps for the membership of samples in all partitions to see how consistent they are:
membership_heatmap(res, k = 2)
membership_heatmap(res, k = 3)
membership_heatmap(res, k = 4)
As soon as the classes for columns are determined, the signatures that are significantly different between subgroups can be looked for. Following are the heatmaps for signatures.
Signature heatmaps where rows are scaled:
Signature heatmaps where rows are not scaled:
get_signatures(res, k = 2, scale_rows = FALSE)
get_signatures(res, k = 3, scale_rows = FALSE)
get_signatures(res, k = 4, scale_rows = FALSE)
Compare the overlap of signatures from different k:
compare_signatures(res)
get_signature() returns a data frame invisibly. To get the list of signatures, the function
call should be assigned to a variable explicitly. In following code, if plot argument is set
to FALSE, no heatmap is plotted while only the differential analysis is performed.
# code only for demonstration
tb = get_signature(res, k = ..., plot = FALSE)
An example of the output of tb is:
#> which_row fdr mean_1 mean_2 scaled_mean_1 scaled_mean_2 km
#> 1 38 0.042760348 8.373488 9.131774 -0.5533452 0.5164555 1
#> 2 40 0.018707592 7.106213 8.469186 -0.6173731 0.5762149 1
#> 3 55 0.019134737 10.221463 11.207825 -0.6159697 0.5749050 1
#> 4 59 0.006059896 5.921854 7.869574 -0.6899429 0.6439467 1
#> 5 60 0.018055526 8.928898 10.211722 -0.6204761 0.5791110 1
#> 6 98 0.009384629 15.714769 14.887706 0.6635654 -0.6193277 2
...
The columns in tb are:
which_row: row indices corresponding to the input matrix.fdr: FDR for the differential test. mean_x: The mean value in group x.scaled_mean_x: The mean value in group x after rows are scaled.km: Row groups if k-means clustering is applied to rows (which is done by automatically selecting number of clusters).If there are too many signatures, top_signatures = ... can be set to only show the
signatures with the highest FDRs:
# code only for demonstration
# e.g. to show the top 500 most significant rows
tb = get_signature(res, k = ..., top_signatures = 500)
If the signatures are defined as these which are uniquely high in current group, diff_method argument
can be set to "uniquely_high_in_one_group":
# code only for demonstration
tb = get_signature(res, k = ..., diff_method = "uniquely_high_in_one_group")
UMAP plot which shows how samples are separated.
dimension_reduction(res, k = 2, method = "UMAP")
dimension_reduction(res, k = 3, method = "UMAP")
dimension_reduction(res, k = 4, method = "UMAP")
Following heatmap shows how subgroups are split when increasing k:
collect_classes(res)
If matrix rows can be associated to genes, consider to use functional_enrichment(res,
...) to perform function enrichment for the signature genes. See this vignette for more detailed explanations.
Parent node: Node03. Child nodes: Node0111 , Node0112 , Node0121 , Node0122 , Node0131 , Node0132-leaf , Node0141-leaf , Node0142-leaf , Node0211 , Node0212 , Node0213-leaf , Node0311-leaf , Node0312-leaf , Node0321-leaf , Node0322-leaf , Node0331-leaf , Node0332-leaf , Node0411-leaf , Node0412-leaf , Node0413-leaf , Node0421-leaf , Node0422-leaf , Node0423-leaf .
The object with results only for a single top-value method and a single partitioning method can be extracted as:
res = res_rh["032"]
A summary of res and all the functions that can be applied to it:
res
#> A 'ConsensusPartition' object with k = 2, 3, 4.
#> On a matrix with 16870 rows and 124 columns.
#> Top rows (1353) are extracted by 'ATC' method.
#> Subgroups are detected by 'skmeans' method.
#> Performed in total 150 partitions by row resampling.
#> Best k for subgroups seems to be 2.
#>
#> Following methods can be applied to this 'ConsensusPartition' object:
#> [1] "cola_report" "collect_classes" "collect_plots"
#> [4] "collect_stats" "colnames" "compare_partitions"
#> [7] "compare_signatures" "consensus_heatmap" "dimension_reduction"
#> [10] "functional_enrichment" "get_anno_col" "get_anno"
#> [13] "get_classes" "get_consensus" "get_matrix"
#> [16] "get_membership" "get_param" "get_signatures"
#> [19] "get_stats" "is_best_k" "is_stable_k"
#> [22] "membership_heatmap" "ncol" "nrow"
#> [25] "plot_ecdf" "predict_classes" "rownames"
#> [28] "select_partition_number" "show" "suggest_best_k"
#> [31] "test_to_known_factors" "top_rows_heatmap"
collect_plots() function collects all the plots made from res for all k (number of subgroups)
into one single page to provide an easy and fast comparison between different k.
collect_plots(res)
The plots are:
k and the heatmap of
predicted classes for each k.k.k.k.All the plots in panels can be made by individual functions and they are plotted later in this section.
select_partition_number() produces several plots showing different
statistics for choosing “optimized” k. There are following statistics:
k;k, the area increased is defined as \(A_k - A_{k-1}\).The detailed explanations of these statistics can be found in the cola vignette.
Generally speaking, higher 1-PAC score, higher mean silhouette score or higher
concordance corresponds to better partition. Rand index and Jaccard index
measure how similar the current partition is compared to partition with k-1.
If they are too similar, we won't accept k is better than k-1.
select_partition_number(res)
The numeric values for all these statistics can be obtained by get_stats().
get_stats(res)
#> k 1-PAC mean_silhouette concordance area_increased Rand Jaccard
#> 2 2 1.000 0.990 0.995 0.499 0.501 0.501
#> 3 3 0.787 0.834 0.928 0.323 0.785 0.592
#> 4 4 0.526 0.462 0.707 0.111 0.919 0.768
suggest_best_k() suggests the best \(k\) based on these statistics. The rules are as follows:
suggest_best_k(res)
#> [1] 2
Following is the table of the partitions (You need to click the show/hide
code output link to see it). The membership matrix (columns with name p*)
is inferred by
clue::cl_consensus()
function with the SE method. Basically the value in the membership matrix
represents the probability to belong to a certain group. The finall subgroup
label for an item is determined with the group with highest probability it
belongs to.
In get_classes() function, the entropy is calculated from the membership
matrix and the silhouette score is calculated from the consensus matrix.
cbind(get_classes(res, k = 2), get_membership(res, k = 2))
#> class entropy silhouette p1 p2
#> HSPC_031 2 0.000 0.991 0.00 1.00
#> HSPC_040 1 0.000 0.999 1.00 0.00
#> HSPC_042 2 0.000 0.991 0.00 1.00
#> HSPC_080 1 0.000 0.999 1.00 0.00
#> HSPC_051 2 0.000 0.991 0.00 1.00
#> HSPC_069 1 0.000 0.999 1.00 0.00
#> HSPC_081 1 0.327 0.936 0.94 0.06
#> HSPC_076 1 0.000 0.999 1.00 0.00
#> HSPC_046 2 0.000 0.991 0.00 1.00
#> HSPC_065 1 0.000 0.999 1.00 0.00
#> HSPC_048 2 0.000 0.991 0.00 1.00
#> Prog_073 1 0.000 0.999 1.00 0.00
#> Prog_068 1 0.000 0.999 1.00 0.00
#> Prog_044 1 0.000 0.999 1.00 0.00
#> Prog_048 1 0.000 0.999 1.00 0.00
#> HSPC_100 1 0.000 0.999 1.00 0.00
#> LT-HSC_028 1 0.000 0.999 1.00 0.00
#> HSPC_088 1 0.000 0.999 1.00 0.00
#> HSPC_089 1 0.000 0.999 1.00 0.00
#> HSPC_114 2 0.000 0.991 0.00 1.00
#> HSPC_126 2 0.242 0.952 0.04 0.96
#> LT-HSC_031 1 0.000 0.999 1.00 0.00
#> Prog_096 2 0.000 0.991 0.00 1.00
#> HSPC_162 2 0.000 0.991 0.00 1.00
#> Prog_151 1 0.000 0.999 1.00 0.00
#> Prog_127 1 0.000 0.999 1.00 0.00
#> Prog_135 2 0.000 0.991 0.00 1.00
#> HSPC_207 1 0.000 0.999 1.00 0.00
#> HSPC_202 2 0.000 0.991 0.00 1.00
#> Prog_199 1 0.000 0.999 1.00 0.00
#> LT-HSC_058 2 0.000 0.991 0.00 1.00
#> Prog_180 2 0.000 0.991 0.00 1.00
#> Prog_210 2 0.000 0.991 0.00 1.00
#> HSPC_244 2 0.000 0.991 0.00 1.00
#> LT-HSC_069 2 0.000 0.991 0.00 1.00
#> Prog_244 1 0.000 0.999 1.00 0.00
#> LT-HSC_071 2 0.000 0.991 0.00 1.00
#> Prog_222 2 0.000 0.991 0.00 1.00
#> Prog_252 2 0.000 0.991 0.00 1.00
#> HSPC_255 2 0.000 0.991 0.00 1.00
#> HSPC_270 1 0.000 0.999 1.00 0.00
#> HSPC_276 1 0.000 0.999 1.00 0.00
#> LT-HSC_080 1 0.000 0.999 1.00 0.00
#> LT-HSC_082 2 0.000 0.991 0.00 1.00
#> HSPC_304 2 0.000 0.991 0.00 1.00
#> HSPC_298 2 0.000 0.991 0.00 1.00
#> LT-HSC_090 2 0.000 0.991 0.00 1.00
#> HSPC_374 1 0.000 0.999 1.00 0.00
#> HSPC_339 1 0.000 0.999 1.00 0.00
#> HSPC_359 1 0.000 0.999 1.00 0.00
#> Prog_378 2 0.000 0.991 0.00 1.00
#> HSPC_392 1 0.000 0.999 1.00 0.00
#> HSPC_398 1 0.000 0.999 1.00 0.00
#> HSPC_422 1 0.000 0.999 1.00 0.00
#> HSPC_380 1 0.000 0.999 1.00 0.00
#> HSPC_405 1 0.000 0.999 1.00 0.00
#> HSPC_396 1 0.000 0.999 1.00 0.00
#> HSPC_402 1 0.000 0.999 1.00 0.00
#> HSPC_463 2 0.000 0.991 0.00 1.00
#> HSPC_453 2 0.000 0.991 0.00 1.00
#> LT-HSC_112 2 0.000 0.991 0.00 1.00
#> LT-HSC_113 2 0.000 0.991 0.00 1.00
#> Prog_445 1 0.000 0.999 1.00 0.00
#> Prog_446 1 0.000 0.999 1.00 0.00
#> Prog_464 1 0.000 0.999 1.00 0.00
#> HSPC_502 1 0.000 0.999 1.00 0.00
#> HSPC_472 1 0.000 0.999 1.00 0.00
#> HSPC_480 1 0.000 0.999 1.00 0.00
#> HSPC_492 1 0.000 0.999 1.00 0.00
#> LT-HSC_126 2 0.000 0.991 0.00 1.00
#> HSPC_474 1 0.000 0.999 1.00 0.00
#> Prog_495 1 0.000 0.999 1.00 0.00
#> Prog_474 2 0.000 0.991 0.00 1.00
#> HSPC_523 2 0.000 0.991 0.00 1.00
#> HSPC_547 2 0.000 0.991 0.00 1.00
#> HSPC_512 1 0.000 0.999 1.00 0.00
#> HSPC_533 2 0.000 0.991 0.00 1.00
#> HSPC_540 1 0.000 0.999 1.00 0.00
#> HSPC_516 1 0.000 0.999 1.00 0.00
#> HSPC_580 2 0.722 0.753 0.20 0.80
#> HSPC_586 1 0.000 0.999 1.00 0.00
#> HSPC_556 1 0.000 0.999 1.00 0.00
#> HSPC_557 1 0.000 0.999 1.00 0.00
#> LT-HSC_151 2 0.000 0.991 0.00 1.00
#> Prog_572 1 0.000 0.999 1.00 0.00
#> HSPC_603 1 0.000 0.999 1.00 0.00
#> HSPC_617 2 0.000 0.991 0.00 1.00
#> HSPC_624 2 0.000 0.991 0.00 1.00
#> Prog_631 2 0.000 0.991 0.00 1.00
#> HSPC_649 2 0.000 0.991 0.00 1.00
#> HSPC_668 1 0.000 0.999 1.00 0.00
#> HSPC_645 2 0.000 0.991 0.00 1.00
#> HSPC_664 2 0.000 0.991 0.00 1.00
#> HSPC_671 1 0.000 0.999 1.00 0.00
#> HSPC_672 1 0.000 0.999 1.00 0.00
#> Prog_642 2 0.000 0.991 0.00 1.00
#> Prog_692 1 0.000 0.999 1.00 0.00
#> Prog_684 1 0.000 0.999 1.00 0.00
#> HSPC_758 2 0.000 0.991 0.00 1.00
#> HSPC_759 1 0.000 0.999 1.00 0.00
#> LT-HSC_195 2 0.000 0.991 0.00 1.00
#> HSPC_723 2 0.000 0.991 0.00 1.00
#> HSPC_736 2 0.000 0.991 0.00 1.00
#> HSPC_742 2 0.000 0.991 0.00 1.00
#> HSPC_724 2 0.000 0.991 0.00 1.00
#> HSPC_761 2 0.000 0.991 0.00 1.00
#> HSPC_732 2 0.000 0.991 0.00 1.00
#> Prog_728 1 0.000 0.999 1.00 0.00
#> LT-HSC_204 2 0.000 0.991 0.00 1.00
#> HSPC_794 1 0.000 0.999 1.00 0.00
#> HSPC_771 1 0.000 0.999 1.00 0.00
#> HSPC_777 1 0.000 0.999 1.00 0.00
#> HSPC_795 2 0.827 0.653 0.26 0.74
#> HSPC_773 2 0.000 0.991 0.00 1.00
#> HSPC_797 1 0.000 0.999 1.00 0.00
#> HSPC_774 1 0.000 0.999 1.00 0.00
#> Prog_784 1 0.000 0.999 1.00 0.00
#> LT-HSC_215 2 0.000 0.991 0.00 1.00
#> HSPC_835 1 0.000 0.999 1.00 0.00
#> HSPC_832 1 0.000 0.999 1.00 0.00
#> HSPC_838 1 0.000 0.999 1.00 0.00
#> HSPC_815 1 0.000 0.999 1.00 0.00
#> HSPC_828 1 0.000 0.999 1.00 0.00
#> HSPC_834 2 0.000 0.991 0.00 1.00
cbind(get_classes(res, k = 3), get_membership(res, k = 3))
#> class entropy silhouette p1 p2 p3
#> HSPC_031 2 0.0000 0.9548 0.00 1.00 0.00
#> HSPC_040 1 0.0000 0.9142 1.00 0.00 0.00
#> HSPC_042 2 0.0000 0.9548 0.00 1.00 0.00
#> HSPC_080 1 0.0000 0.9142 1.00 0.00 0.00
#> HSPC_051 2 0.0000 0.9548 0.00 1.00 0.00
#> HSPC_069 3 0.2066 0.8540 0.06 0.00 0.94
#> HSPC_081 1 0.2959 0.8158 0.90 0.10 0.00
#> HSPC_076 1 0.6302 -0.0253 0.52 0.00 0.48
#> HSPC_046 2 0.0000 0.9548 0.00 1.00 0.00
#> HSPC_065 1 0.0000 0.9142 1.00 0.00 0.00
#> HSPC_048 2 0.3340 0.8379 0.12 0.88 0.00
#> Prog_073 1 0.0000 0.9142 1.00 0.00 0.00
#> Prog_068 1 0.0000 0.9142 1.00 0.00 0.00
#> Prog_044 1 0.0892 0.9056 0.98 0.00 0.02
#> Prog_048 1 0.2947 0.8751 0.92 0.02 0.06
#> HSPC_100 1 0.0000 0.9142 1.00 0.00 0.00
#> LT-HSC_028 3 0.2066 0.8540 0.06 0.00 0.94
#> HSPC_088 1 0.5560 0.5418 0.70 0.00 0.30
#> HSPC_089 1 0.0000 0.9142 1.00 0.00 0.00
#> HSPC_114 2 0.0000 0.9548 0.00 1.00 0.00
#> HSPC_126 2 0.6302 0.0887 0.48 0.52 0.00
#> LT-HSC_031 1 0.2959 0.8444 0.90 0.00 0.10
#> Prog_096 2 0.0000 0.9548 0.00 1.00 0.00
#> HSPC_162 2 0.0000 0.9548 0.00 1.00 0.00
#> Prog_151 1 0.0000 0.9142 1.00 0.00 0.00
#> Prog_127 1 0.0000 0.9142 1.00 0.00 0.00
#> Prog_135 2 0.0000 0.9548 0.00 1.00 0.00
#> HSPC_207 1 0.0000 0.9142 1.00 0.00 0.00
#> HSPC_202 2 0.0000 0.9548 0.00 1.00 0.00
#> Prog_199 1 0.0000 0.9142 1.00 0.00 0.00
#> LT-HSC_058 2 0.0000 0.9548 0.00 1.00 0.00
#> Prog_180 2 0.0000 0.9548 0.00 1.00 0.00
#> Prog_210 2 0.0000 0.9548 0.00 1.00 0.00
#> HSPC_244 2 0.0000 0.9548 0.00 1.00 0.00
#> LT-HSC_069 2 0.0000 0.9548 0.00 1.00 0.00
#> Prog_244 1 0.0000 0.9142 1.00 0.00 0.00
#> LT-HSC_071 2 0.0000 0.9548 0.00 1.00 0.00
#> Prog_222 2 0.0000 0.9548 0.00 1.00 0.00
#> Prog_252 2 0.0000 0.9548 0.00 1.00 0.00
#> HSPC_255 2 0.0000 0.9548 0.00 1.00 0.00
#> HSPC_270 1 0.0000 0.9142 1.00 0.00 0.00
#> HSPC_276 1 0.0000 0.9142 1.00 0.00 0.00
#> LT-HSC_080 3 0.0000 0.8611 0.00 0.00 1.00
#> LT-HSC_082 2 0.0000 0.9548 0.00 1.00 0.00
#> HSPC_304 2 0.0892 0.9407 0.00 0.98 0.02
#> HSPC_298 2 0.0000 0.9548 0.00 1.00 0.00
#> LT-HSC_090 2 0.0000 0.9548 0.00 1.00 0.00
#> HSPC_374 3 0.0000 0.8611 0.00 0.00 1.00
#> HSPC_339 1 0.0000 0.9142 1.00 0.00 0.00
#> HSPC_359 3 0.0000 0.8611 0.00 0.00 1.00
#> Prog_378 2 0.0892 0.9380 0.02 0.98 0.00
#> HSPC_392 1 0.0000 0.9142 1.00 0.00 0.00
#> HSPC_398 1 0.5016 0.6568 0.76 0.00 0.24
#> HSPC_422 1 0.5948 0.3959 0.64 0.00 0.36
#> HSPC_380 3 0.5016 0.6945 0.24 0.00 0.76
#> HSPC_405 1 0.3340 0.8231 0.88 0.00 0.12
#> HSPC_396 1 0.0000 0.9142 1.00 0.00 0.00
#> HSPC_402 3 0.6244 0.2766 0.44 0.00 0.56
#> HSPC_463 2 0.0000 0.9548 0.00 1.00 0.00
#> HSPC_453 3 0.0000 0.8611 0.00 0.00 1.00
#> LT-HSC_112 2 0.6126 0.4108 0.00 0.60 0.40
#> LT-HSC_113 2 0.0000 0.9548 0.00 1.00 0.00
#> Prog_445 1 0.0892 0.9044 0.98 0.00 0.02
#> Prog_446 1 0.2066 0.8834 0.94 0.00 0.06
#> Prog_464 1 0.6045 0.3439 0.62 0.00 0.38
#> HSPC_502 3 0.0000 0.8611 0.00 0.00 1.00
#> HSPC_472 3 0.1529 0.8583 0.04 0.00 0.96
#> HSPC_480 3 0.4002 0.7815 0.16 0.00 0.84
#> HSPC_492 1 0.0000 0.9142 1.00 0.00 0.00
#> LT-HSC_126 2 0.5835 0.5419 0.00 0.66 0.34
#> HSPC_474 1 0.0000 0.9142 1.00 0.00 0.00
#> Prog_495 3 0.6302 0.1428 0.48 0.00 0.52
#> Prog_474 2 0.0000 0.9548 0.00 1.00 0.00
#> HSPC_523 2 0.5016 0.6998 0.00 0.76 0.24
#> HSPC_547 2 0.4291 0.7814 0.00 0.82 0.18
#> HSPC_512 3 0.0892 0.8606 0.02 0.00 0.98
#> HSPC_533 2 0.0000 0.9548 0.00 1.00 0.00
#> HSPC_540 1 0.1529 0.8968 0.96 0.00 0.04
#> HSPC_516 1 0.0000 0.9142 1.00 0.00 0.00
#> HSPC_580 1 0.5835 0.4586 0.66 0.34 0.00
#> HSPC_586 1 0.2066 0.8817 0.94 0.00 0.06
#> HSPC_556 3 0.0000 0.8611 0.00 0.00 1.00
#> HSPC_557 1 0.1529 0.8961 0.96 0.00 0.04
#> LT-HSC_151 2 0.0000 0.9548 0.00 1.00 0.00
#> Prog_572 3 0.5835 0.5286 0.34 0.00 0.66
#> HSPC_603 1 0.0000 0.9142 1.00 0.00 0.00
#> HSPC_617 2 0.0000 0.9548 0.00 1.00 0.00
#> HSPC_624 2 0.0000 0.9548 0.00 1.00 0.00
#> Prog_631 2 0.0000 0.9548 0.00 1.00 0.00
#> HSPC_649 2 0.0000 0.9548 0.00 1.00 0.00
#> HSPC_668 1 0.0000 0.9142 1.00 0.00 0.00
#> HSPC_645 2 0.0000 0.9548 0.00 1.00 0.00
#> HSPC_664 2 0.0000 0.9548 0.00 1.00 0.00
#> HSPC_671 1 0.1529 0.8945 0.96 0.00 0.04
#> HSPC_672 1 0.0000 0.9142 1.00 0.00 0.00
#> Prog_642 2 0.0000 0.9548 0.00 1.00 0.00
#> Prog_692 3 0.4002 0.7843 0.16 0.00 0.84
#> Prog_684 1 0.2066 0.8817 0.94 0.00 0.06
#> HSPC_758 2 0.0000 0.9548 0.00 1.00 0.00
#> HSPC_759 3 0.0000 0.8611 0.00 0.00 1.00
#> LT-HSC_195 3 0.0000 0.8611 0.00 0.00 1.00
#> HSPC_723 2 0.0892 0.9409 0.00 0.98 0.02
#> HSPC_736 2 0.0892 0.9409 0.00 0.98 0.02
#> HSPC_742 3 0.0000 0.8611 0.00 0.00 1.00
#> HSPC_724 2 0.0000 0.9548 0.00 1.00 0.00
#> HSPC_761 2 0.0000 0.9548 0.00 1.00 0.00
#> HSPC_732 2 0.0000 0.9548 0.00 1.00 0.00
#> Prog_728 3 0.2537 0.8424 0.08 0.00 0.92
#> LT-HSC_204 2 0.0000 0.9548 0.00 1.00 0.00
#> HSPC_794 3 0.4555 0.7444 0.20 0.00 0.80
#> HSPC_771 3 0.2066 0.8540 0.06 0.00 0.94
#> HSPC_777 3 0.4291 0.7641 0.18 0.00 0.82
#> HSPC_795 3 0.0000 0.8611 0.00 0.00 1.00
#> HSPC_773 3 0.6192 0.1457 0.00 0.42 0.58
#> HSPC_797 1 0.4002 0.7808 0.84 0.00 0.16
#> HSPC_774 1 0.0000 0.9142 1.00 0.00 0.00
#> Prog_784 3 0.2066 0.8540 0.06 0.00 0.94
#> LT-HSC_215 3 0.0000 0.8611 0.00 0.00 1.00
#> HSPC_835 3 0.0000 0.8611 0.00 0.00 1.00
#> HSPC_832 3 0.6244 0.2780 0.44 0.00 0.56
#> HSPC_838 3 0.0892 0.8612 0.02 0.00 0.98
#> HSPC_815 3 0.5706 0.5763 0.32 0.00 0.68
#> HSPC_828 3 0.0892 0.8610 0.02 0.00 0.98
#> HSPC_834 2 0.5216 0.6739 0.00 0.74 0.26
cbind(get_classes(res, k = 4), get_membership(res, k = 4))
#> class entropy silhouette p1 p2 p3 p4
#> HSPC_031 4 0.5570 0.0899 0.00 0.44 0.02 0.54
#> HSPC_040 1 0.4713 0.3886 0.64 0.00 0.00 0.36
#> HSPC_042 4 0.4994 -0.3467 0.00 0.48 0.00 0.52
#> HSPC_080 1 0.0000 0.7359 1.00 0.00 0.00 0.00
#> HSPC_051 2 0.4907 0.4645 0.00 0.58 0.00 0.42
#> HSPC_069 3 0.3610 0.6390 0.20 0.00 0.80 0.00
#> HSPC_081 4 0.6611 -0.1340 0.46 0.02 0.04 0.48
#> HSPC_076 3 0.4977 0.3064 0.46 0.00 0.54 0.00
#> HSPC_046 2 0.2345 0.6133 0.00 0.90 0.00 0.10
#> HSPC_065 1 0.0000 0.7359 1.00 0.00 0.00 0.00
#> HSPC_048 2 0.6212 0.3859 0.06 0.56 0.00 0.38
#> Prog_073 1 0.3172 0.6631 0.84 0.00 0.00 0.16
#> Prog_068 1 0.3525 0.7330 0.86 0.00 0.04 0.10
#> Prog_044 1 0.5392 0.4814 0.68 0.00 0.28 0.04
#> Prog_048 1 0.7310 0.3084 0.48 0.00 0.16 0.36
#> HSPC_100 1 0.2345 0.7078 0.90 0.00 0.00 0.10
#> LT-HSC_028 3 0.3801 0.6338 0.22 0.00 0.78 0.00
#> HSPC_088 1 0.5594 -0.0680 0.52 0.00 0.46 0.02
#> HSPC_089 1 0.3172 0.6605 0.84 0.00 0.00 0.16
#> HSPC_114 2 0.4406 0.5785 0.00 0.70 0.00 0.30
#> HSPC_126 4 0.7544 0.2021 0.20 0.34 0.00 0.46
#> LT-HSC_031 1 0.5383 0.6140 0.74 0.00 0.16 0.10
#> Prog_096 2 0.0707 0.6018 0.00 0.98 0.00 0.02
#> HSPC_162 2 0.4994 0.3349 0.00 0.52 0.00 0.48
#> Prog_151 1 0.1913 0.7336 0.94 0.00 0.04 0.02
#> Prog_127 1 0.3801 0.5894 0.78 0.00 0.00 0.22
#> Prog_135 2 0.3610 0.6110 0.00 0.80 0.00 0.20
#> HSPC_207 1 0.1637 0.7268 0.94 0.00 0.00 0.06
#> HSPC_202 2 0.1211 0.6060 0.00 0.96 0.00 0.04
#> Prog_199 1 0.3400 0.6277 0.82 0.00 0.00 0.18
#> LT-HSC_058 2 0.3198 0.5034 0.00 0.88 0.08 0.04
#> Prog_180 2 0.0000 0.6081 0.00 1.00 0.00 0.00
#> Prog_210 2 0.4948 0.4072 0.00 0.56 0.00 0.44
#> HSPC_244 2 0.0000 0.6081 0.00 1.00 0.00 0.00
#> LT-HSC_069 2 0.0000 0.6081 0.00 1.00 0.00 0.00
#> Prog_244 1 0.2335 0.7350 0.92 0.00 0.02 0.06
#> LT-HSC_071 2 0.0000 0.6081 0.00 1.00 0.00 0.00
#> Prog_222 2 0.4936 0.2690 0.00 0.70 0.02 0.28
#> Prog_252 2 0.4624 0.5481 0.00 0.66 0.00 0.34
#> HSPC_255 2 0.3610 0.6126 0.00 0.80 0.00 0.20
#> HSPC_270 1 0.3172 0.6496 0.84 0.00 0.00 0.16
#> HSPC_276 1 0.3821 0.6856 0.84 0.00 0.12 0.04
#> LT-HSC_080 3 0.3198 0.6106 0.04 0.00 0.88 0.08
#> LT-HSC_082 2 0.4907 0.4644 0.00 0.58 0.00 0.42
#> HSPC_304 2 0.3400 0.5409 0.00 0.82 0.00 0.18
#> HSPC_298 2 0.3975 0.6022 0.00 0.76 0.00 0.24
#> LT-HSC_090 2 0.0000 0.6081 0.00 1.00 0.00 0.00
#> HSPC_374 3 0.3821 0.6405 0.12 0.00 0.84 0.04
#> HSPC_339 1 0.2011 0.7141 0.92 0.00 0.08 0.00
#> HSPC_359 3 0.3935 0.6333 0.10 0.00 0.84 0.06
#> Prog_378 4 0.4713 -0.0575 0.00 0.36 0.00 0.64
#> HSPC_392 1 0.1211 0.7261 0.96 0.00 0.04 0.00
#> HSPC_398 1 0.4907 0.1005 0.58 0.00 0.42 0.00
#> HSPC_422 1 0.4977 -0.0899 0.54 0.00 0.46 0.00
#> HSPC_380 3 0.4713 0.5032 0.36 0.00 0.64 0.00
#> HSPC_405 1 0.4522 0.3788 0.68 0.00 0.32 0.00
#> HSPC_396 1 0.6074 0.4478 0.60 0.00 0.06 0.34
#> HSPC_402 3 0.4948 0.3328 0.44 0.00 0.56 0.00
#> HSPC_463 2 0.4977 0.3709 0.00 0.54 0.00 0.46
#> HSPC_453 3 0.6686 0.2855 0.00 0.18 0.62 0.20
#> LT-HSC_112 2 0.7845 -0.1152 0.00 0.40 0.32 0.28
#> LT-HSC_113 2 0.0000 0.6081 0.00 1.00 0.00 0.00
#> Prog_445 1 0.1913 0.7323 0.94 0.00 0.04 0.02
#> Prog_446 4 0.7016 -0.0227 0.32 0.00 0.14 0.54
#> Prog_464 1 0.6005 -0.0667 0.50 0.00 0.46 0.04
#> HSPC_502 3 0.4731 0.4702 0.00 0.06 0.78 0.16
#> HSPC_472 3 0.4755 0.6394 0.20 0.00 0.76 0.04
#> HSPC_480 3 0.6011 0.1457 0.48 0.00 0.48 0.04
#> HSPC_492 1 0.3853 0.6414 0.82 0.00 0.16 0.02
#> LT-HSC_126 2 0.7493 -0.0272 0.00 0.48 0.32 0.20
#> HSPC_474 1 0.4731 0.6628 0.78 0.00 0.16 0.06
#> Prog_495 3 0.5535 0.3624 0.42 0.00 0.56 0.02
#> Prog_474 2 0.4713 0.5379 0.00 0.64 0.00 0.36
#> HSPC_523 4 0.6836 0.2700 0.00 0.28 0.14 0.58
#> HSPC_547 4 0.7261 0.1620 0.00 0.34 0.16 0.50
#> HSPC_512 3 0.4553 0.6430 0.18 0.00 0.78 0.04
#> HSPC_533 2 0.3975 0.4314 0.00 0.76 0.00 0.24
#> HSPC_540 1 0.7261 0.4305 0.50 0.00 0.16 0.34
#> HSPC_516 4 0.4948 -0.0380 0.44 0.00 0.00 0.56
#> HSPC_580 4 0.6855 0.2862 0.20 0.20 0.00 0.60
#> HSPC_586 1 0.7357 0.4370 0.50 0.00 0.18 0.32
#> HSPC_556 3 0.3172 0.5296 0.00 0.00 0.84 0.16
#> HSPC_557 1 0.3611 0.7121 0.86 0.00 0.08 0.06
#> LT-HSC_151 2 0.4522 0.5682 0.00 0.68 0.00 0.32
#> Prog_572 3 0.5793 0.4320 0.36 0.00 0.60 0.04
#> HSPC_603 1 0.2011 0.7293 0.92 0.00 0.00 0.08
#> HSPC_617 4 0.4977 -0.2730 0.00 0.46 0.00 0.54
#> HSPC_624 2 0.4713 0.5352 0.00 0.64 0.00 0.36
#> Prog_631 2 0.4406 0.5785 0.00 0.70 0.00 0.30
#> HSPC_649 2 0.4406 0.5772 0.00 0.70 0.00 0.30
#> HSPC_668 1 0.0000 0.7359 1.00 0.00 0.00 0.00
#> HSPC_645 2 0.4406 0.5772 0.00 0.70 0.00 0.30
#> HSPC_664 2 0.4790 0.5170 0.00 0.62 0.00 0.38
#> HSPC_671 1 0.3935 0.7079 0.84 0.00 0.10 0.06
#> HSPC_672 1 0.0707 0.7360 0.98 0.00 0.00 0.02
#> Prog_642 2 0.4277 0.5862 0.00 0.72 0.00 0.28
#> Prog_692 3 0.4855 0.4431 0.40 0.00 0.60 0.00
#> Prog_684 1 0.5106 0.5344 0.72 0.00 0.24 0.04
#> HSPC_758 2 0.4522 0.5680 0.00 0.68 0.00 0.32
#> HSPC_759 3 0.2921 0.5465 0.00 0.00 0.86 0.14
#> LT-HSC_195 3 0.6686 0.2723 0.00 0.20 0.62 0.18
#> HSPC_723 2 0.6005 0.2295 0.00 0.50 0.04 0.46
#> HSPC_736 2 0.3198 0.5014 0.00 0.88 0.04 0.08
#> HSPC_742 3 0.6686 0.2723 0.00 0.20 0.62 0.18
#> HSPC_724 2 0.0707 0.5954 0.00 0.98 0.00 0.02
#> HSPC_761 2 0.0707 0.6143 0.00 0.98 0.00 0.02
#> HSPC_732 2 0.0707 0.6143 0.00 0.98 0.00 0.02
#> Prog_728 3 0.4642 0.6139 0.24 0.00 0.74 0.02
#> LT-HSC_204 2 0.4624 0.4907 0.00 0.66 0.00 0.34
#> HSPC_794 3 0.5062 0.5670 0.30 0.00 0.68 0.02
#> HSPC_771 3 0.4406 0.5800 0.30 0.00 0.70 0.00
#> HSPC_777 3 0.5512 0.5389 0.30 0.00 0.66 0.04
#> HSPC_795 3 0.7347 0.2467 0.02 0.12 0.56 0.30
#> HSPC_773 2 0.7249 0.0947 0.00 0.54 0.26 0.20
#> HSPC_797 1 0.6370 0.4412 0.62 0.00 0.28 0.10
#> HSPC_774 1 0.0000 0.7359 1.00 0.00 0.00 0.00
#> Prog_784 3 0.3801 0.6338 0.22 0.00 0.78 0.00
#> LT-HSC_215 3 0.7497 0.0913 0.00 0.26 0.50 0.24
#> HSPC_835 3 0.2335 0.6108 0.02 0.00 0.92 0.06
#> HSPC_832 3 0.5271 0.5174 0.34 0.00 0.64 0.02
#> HSPC_838 3 0.3606 0.6453 0.14 0.00 0.84 0.02
#> HSPC_815 3 0.6336 0.2071 0.46 0.00 0.48 0.06
#> HSPC_828 3 0.4079 0.6348 0.18 0.00 0.80 0.02
#> HSPC_834 2 0.6797 0.1213 0.00 0.60 0.24 0.16
Heatmaps for the consensus matrix. It visualizes the probability of two samples to be in a same group.
consensus_heatmap(res, k = 2)
consensus_heatmap(res, k = 3)
consensus_heatmap(res, k = 4)
Heatmaps for the membership of samples in all partitions to see how consistent they are:
membership_heatmap(res, k = 2)
membership_heatmap(res, k = 3)
membership_heatmap(res, k = 4)
As soon as the classes for columns are determined, the signatures that are significantly different between subgroups can be looked for. Following are the heatmaps for signatures.
Signature heatmaps where rows are scaled:
Signature heatmaps where rows are not scaled:
get_signatures(res, k = 2, scale_rows = FALSE)
get_signatures(res, k = 3, scale_rows = FALSE)
get_signatures(res, k = 4, scale_rows = FALSE)
Compare the overlap of signatures from different k:
compare_signatures(res)
get_signature() returns a data frame invisibly. To get the list of signatures, the function
call should be assigned to a variable explicitly. In following code, if plot argument is set
to FALSE, no heatmap is plotted while only the differential analysis is performed.
# code only for demonstration
tb = get_signature(res, k = ..., plot = FALSE)
An example of the output of tb is:
#> which_row fdr mean_1 mean_2 scaled_mean_1 scaled_mean_2 km
#> 1 38 0.042760348 8.373488 9.131774 -0.5533452 0.5164555 1
#> 2 40 0.018707592 7.106213 8.469186 -0.6173731 0.5762149 1
#> 3 55 0.019134737 10.221463 11.207825 -0.6159697 0.5749050 1
#> 4 59 0.006059896 5.921854 7.869574 -0.6899429 0.6439467 1
#> 5 60 0.018055526 8.928898 10.211722 -0.6204761 0.5791110 1
#> 6 98 0.009384629 15.714769 14.887706 0.6635654 -0.6193277 2
...
The columns in tb are:
which_row: row indices corresponding to the input matrix.fdr: FDR for the differential test. mean_x: The mean value in group x.scaled_mean_x: The mean value in group x after rows are scaled.km: Row groups if k-means clustering is applied to rows (which is done by automatically selecting number of clusters).If there are too many signatures, top_signatures = ... can be set to only show the
signatures with the highest FDRs:
# code only for demonstration
# e.g. to show the top 500 most significant rows
tb = get_signature(res, k = ..., top_signatures = 500)
If the signatures are defined as these which are uniquely high in current group, diff_method argument
can be set to "uniquely_high_in_one_group":
# code only for demonstration
tb = get_signature(res, k = ..., diff_method = "uniquely_high_in_one_group")
UMAP plot which shows how samples are separated.
dimension_reduction(res, k = 2, method = "UMAP")
dimension_reduction(res, k = 3, method = "UMAP")
dimension_reduction(res, k = 4, method = "UMAP")
Following heatmap shows how subgroups are split when increasing k:
collect_classes(res)
If matrix rows can be associated to genes, consider to use functional_enrichment(res,
...) to perform function enrichment for the signature genes. See this vignette for more detailed explanations.
Parent node: Node03. Child nodes: Node0111 , Node0112 , Node0121 , Node0122 , Node0131 , Node0132-leaf , Node0141-leaf , Node0142-leaf , Node0211 , Node0212 , Node0213-leaf , Node0311-leaf , Node0312-leaf , Node0321-leaf , Node0322-leaf , Node0331-leaf , Node0332-leaf , Node0411-leaf , Node0412-leaf , Node0413-leaf , Node0421-leaf , Node0422-leaf , Node0423-leaf .
The object with results only for a single top-value method and a single partitioning method can be extracted as:
res = res_rh["033"]
A summary of res and all the functions that can be applied to it:
res
#> A 'ConsensusPartition' object with k = 2, 3, 4.
#> On a matrix with 16563 rows and 90 columns.
#> Top rows (1656) are extracted by 'ATC' method.
#> Subgroups are detected by 'skmeans' method.
#> Performed in total 150 partitions by row resampling.
#> Best k for subgroups seems to be 3.
#>
#> Following methods can be applied to this 'ConsensusPartition' object:
#> [1] "cola_report" "collect_classes" "collect_plots"
#> [4] "collect_stats" "colnames" "compare_partitions"
#> [7] "compare_signatures" "consensus_heatmap" "dimension_reduction"
#> [10] "functional_enrichment" "get_anno_col" "get_anno"
#> [13] "get_classes" "get_consensus" "get_matrix"
#> [16] "get_membership" "get_param" "get_signatures"
#> [19] "get_stats" "is_best_k" "is_stable_k"
#> [22] "membership_heatmap" "ncol" "nrow"
#> [25] "plot_ecdf" "predict_classes" "rownames"
#> [28] "select_partition_number" "show" "suggest_best_k"
#> [31] "test_to_known_factors" "top_rows_heatmap"
collect_plots() function collects all the plots made from res for all k (number of subgroups)
into one single page to provide an easy and fast comparison between different k.
collect_plots(res)
The plots are:
k and the heatmap of
predicted classes for each k.k.k.k.All the plots in panels can be made by individual functions and they are plotted later in this section.
select_partition_number() produces several plots showing different
statistics for choosing “optimized” k. There are following statistics:
k;k, the area increased is defined as \(A_k - A_{k-1}\).The detailed explanations of these statistics can be found in the cola vignette.
Generally speaking, higher 1-PAC score, higher mean silhouette score or higher
concordance corresponds to better partition. Rand index and Jaccard index
measure how similar the current partition is compared to partition with k-1.
If they are too similar, we won't accept k is better than k-1.
select_partition_number(res)
The numeric values for all these statistics can be obtained by get_stats().
get_stats(res)
#> k 1-PAC mean_silhouette concordance area_increased Rand Jaccard
#> 2 2 0.889 0.949 0.976 0.505 0.495 0.495
#> 3 3 0.906 0.942 0.974 0.305 0.799 0.613
#> 4 4 0.731 0.746 0.880 0.121 0.845 0.590
suggest_best_k() suggests the best \(k\) based on these statistics. The rules are as follows:
suggest_best_k(res)
#> [1] 3
Following is the table of the partitions (You need to click the show/hide
code output link to see it). The membership matrix (columns with name p*)
is inferred by
clue::cl_consensus()
function with the SE method. Basically the value in the membership matrix
represents the probability to belong to a certain group. The finall subgroup
label for an item is determined with the group with highest probability it
belongs to.
In get_classes() function, the entropy is calculated from the membership
matrix and the silhouette score is calculated from the consensus matrix.
cbind(get_classes(res, k = 2), get_membership(res, k = 2))
#> class entropy silhouette p1 p2
#> HSPC_027 2 0.000 0.961 0.00 1.00
#> Prog_031 1 0.000 0.990 1.00 0.00
#> Prog_037 2 0.795 0.716 0.24 0.76
#> Prog_026 1 0.000 0.990 1.00 0.00
#> Prog_004 1 0.000 0.990 1.00 0.00
#> HSPC_070 2 0.000 0.961 0.00 1.00
#> Prog_072 1 0.000 0.990 1.00 0.00
#> LT-HSC_024 1 0.000 0.990 1.00 0.00
#> Prog_092 1 0.000 0.990 1.00 0.00
#> Prog_122 1 0.000 0.990 1.00 0.00
#> Prog_124 2 0.000 0.961 0.00 1.00
#> LT-HSC_036 1 0.000 0.990 1.00 0.00
#> Prog_142 2 0.000 0.961 0.00 1.00
#> Prog_154 1 0.000 0.990 1.00 0.00
#> Prog_161 2 0.925 0.538 0.34 0.66
#> Prog_131 1 0.000 0.990 1.00 0.00
#> HSPC_193 2 0.000 0.961 0.00 1.00
#> HSPC_183 2 0.000 0.961 0.00 1.00
#> HSPC_186 1 0.000 0.990 1.00 0.00
#> Prog_187 1 0.000 0.990 1.00 0.00
#> Prog_208 1 0.000 0.990 1.00 0.00
#> Prog_191 1 0.000 0.990 1.00 0.00
#> LT-HSC_063 2 0.000 0.961 0.00 1.00
#> Prog_247 1 0.000 0.990 1.00 0.00
#> Prog_225 1 0.000 0.990 1.00 0.00
#> Prog_232 2 0.000 0.961 0.00 1.00
#> Prog_246 2 0.760 0.744 0.22 0.78
#> HSPC_291 2 0.000 0.961 0.00 1.00
#> Prog_271 2 0.000 0.961 0.00 1.00
#> Prog_280 2 0.000 0.961 0.00 1.00
#> Prog_293 2 0.000 0.961 0.00 1.00
#> LT-HSC_084 2 0.000 0.961 0.00 1.00
#> HSPC_299 2 0.000 0.961 0.00 1.00
#> HSPC_306 2 0.000 0.961 0.00 1.00
#> Prog_314 1 0.000 0.990 1.00 0.00
#> HSPC_348 1 0.634 0.805 0.84 0.16
#> Prog_394 1 0.000 0.990 1.00 0.00
#> Prog_407 1 0.000 0.990 1.00 0.00
#> HSPC_447 2 0.000 0.961 0.00 1.00
#> Prog_439 1 0.000 0.990 1.00 0.00
#> Prog_463 1 0.000 0.990 1.00 0.00
#> Prog_459 1 0.000 0.990 1.00 0.00
#> Prog_448 2 0.000 0.961 0.00 1.00
#> Prog_467 1 0.000 0.990 1.00 0.00
#> Prog_431 1 0.141 0.971 0.98 0.02
#> Prog_481 2 0.000 0.961 0.00 1.00
#> Prog_496 1 0.000 0.990 1.00 0.00
#> Prog_517 2 0.000 0.961 0.00 1.00
#> Prog_513 1 0.000 0.990 1.00 0.00
#> Prog_585 1 0.000 0.990 1.00 0.00
#> Prog_568 1 0.000 0.990 1.00 0.00
#> Prog_556 1 0.000 0.990 1.00 0.00
#> Prog_594 1 0.000 0.990 1.00 0.00
#> Prog_613 1 0.000 0.990 1.00 0.00
#> Prog_596 2 0.000 0.961 0.00 1.00
#> Prog_597 1 0.000 0.990 1.00 0.00
#> Prog_604 1 0.000 0.990 1.00 0.00
#> Prog_610 1 0.000 0.990 1.00 0.00
#> Prog_611 1 0.000 0.990 1.00 0.00
#> Prog_635 1 0.000 0.990 1.00 0.00
#> Prog_644 2 0.327 0.913 0.06 0.94
#> Prog_656 2 0.000 0.961 0.00 1.00
#> Prog_662 2 0.000 0.961 0.00 1.00
#> Prog_674 2 0.000 0.961 0.00 1.00
#> Prog_676 1 0.000 0.990 1.00 0.00
#> Prog_659 2 0.000 0.961 0.00 1.00
#> Prog_666 2 0.971 0.399 0.40 0.60
#> HSPC_706 2 0.000 0.961 0.00 1.00
#> Prog_716 1 0.000 0.990 1.00 0.00
#> Prog_711 1 0.000 0.990 1.00 0.00
#> Prog_694 2 0.529 0.860 0.12 0.88
#> Prog_689 2 0.000 0.961 0.00 1.00
#> Prog_707 2 0.000 0.961 0.00 1.00
#> Prog_690 2 0.000 0.961 0.00 1.00
#> Prog_733 1 0.760 0.716 0.78 0.22
#> Prog_745 2 0.000 0.961 0.00 1.00
#> Prog_751 2 0.760 0.744 0.22 0.78
#> Prog_740 2 0.000 0.961 0.00 1.00
#> Prog_752 1 0.000 0.990 1.00 0.00
#> Prog_758 1 0.000 0.990 1.00 0.00
#> Prog_747 2 0.000 0.961 0.00 1.00
#> Prog_724 2 0.000 0.961 0.00 1.00
#> Prog_738 2 0.000 0.961 0.00 1.00
#> Prog_744 2 0.000 0.961 0.00 1.00
#> Prog_775 2 0.000 0.961 0.00 1.00
#> Prog_799 2 0.242 0.932 0.04 0.96
#> Prog_785 2 0.469 0.880 0.10 0.90
#> Prog_806 2 0.000 0.961 0.00 1.00
#> Prog_827 1 0.000 0.990 1.00 0.00
#> Prog_851 2 0.000 0.961 0.00 1.00
cbind(get_classes(res, k = 3), get_membership(res, k = 3))
#> class entropy silhouette p1 p2 p3
#> HSPC_027 2 0.000 1.0000 0.00 1.00 0.00
#> Prog_031 1 0.000 0.9502 1.00 0.00 0.00
#> Prog_037 3 0.000 0.9661 0.00 0.00 1.00
#> Prog_026 1 0.000 0.9502 1.00 0.00 0.00
#> Prog_004 1 0.000 0.9502 1.00 0.00 0.00
#> HSPC_070 2 0.000 1.0000 0.00 1.00 0.00
#> Prog_072 1 0.000 0.9502 1.00 0.00 0.00
#> LT-HSC_024 1 0.000 0.9502 1.00 0.00 0.00
#> Prog_092 3 0.296 0.8783 0.10 0.00 0.90
#> Prog_122 1 0.000 0.9502 1.00 0.00 0.00
#> Prog_124 2 0.000 1.0000 0.00 1.00 0.00
#> LT-HSC_036 1 0.000 0.9502 1.00 0.00 0.00
#> Prog_142 2 0.000 1.0000 0.00 1.00 0.00
#> Prog_154 1 0.000 0.9502 1.00 0.00 0.00
#> Prog_161 3 0.000 0.9661 0.00 0.00 1.00
#> Prog_131 1 0.000 0.9502 1.00 0.00 0.00
#> HSPC_193 2 0.000 1.0000 0.00 1.00 0.00
#> HSPC_183 2 0.000 1.0000 0.00 1.00 0.00
#> HSPC_186 3 0.000 0.9661 0.00 0.00 1.00
#> Prog_187 1 0.000 0.9502 1.00 0.00 0.00
#> Prog_208 1 0.000 0.9502 1.00 0.00 0.00
#> Prog_191 1 0.000 0.9502 1.00 0.00 0.00
#> LT-HSC_063 2 0.000 1.0000 0.00 1.00 0.00
#> Prog_247 1 0.334 0.8548 0.88 0.00 0.12
#> Prog_225 1 0.000 0.9502 1.00 0.00 0.00
#> Prog_232 2 0.000 1.0000 0.00 1.00 0.00
#> Prog_246 3 0.000 0.9661 0.00 0.00 1.00
#> HSPC_291 2 0.000 1.0000 0.00 1.00 0.00
#> Prog_271 2 0.000 1.0000 0.00 1.00 0.00
#> Prog_280 2 0.000 1.0000 0.00 1.00 0.00
#> Prog_293 3 0.296 0.8861 0.00 0.10 0.90
#> LT-HSC_084 3 0.254 0.9057 0.00 0.08 0.92
#> HSPC_299 2 0.000 1.0000 0.00 1.00 0.00
#> HSPC_306 2 0.000 1.0000 0.00 1.00 0.00
#> Prog_314 1 0.482 0.8160 0.84 0.04 0.12
#> HSPC_348 1 0.429 0.7667 0.82 0.18 0.00
#> Prog_394 3 0.000 0.9661 0.00 0.00 1.00
#> Prog_407 3 0.000 0.9661 0.00 0.00 1.00
#> HSPC_447 2 0.000 1.0000 0.00 1.00 0.00
#> Prog_439 1 0.000 0.9502 1.00 0.00 0.00
#> Prog_463 1 0.000 0.9502 1.00 0.00 0.00
#> Prog_459 1 0.000 0.9502 1.00 0.00 0.00
#> Prog_448 3 0.296 0.8861 0.00 0.10 0.90
#> Prog_467 1 0.000 0.9502 1.00 0.00 0.00
#> Prog_431 1 0.000 0.9502 1.00 0.00 0.00
#> Prog_481 2 0.000 1.0000 0.00 1.00 0.00
#> Prog_496 1 0.000 0.9502 1.00 0.00 0.00
#> Prog_517 2 0.000 1.0000 0.00 1.00 0.00
#> Prog_513 1 0.000 0.9502 1.00 0.00 0.00
#> Prog_585 1 0.000 0.9502 1.00 0.00 0.00
#> Prog_568 3 0.522 0.6303 0.26 0.00 0.74
#> Prog_556 1 0.000 0.9502 1.00 0.00 0.00
#> Prog_594 1 0.153 0.9235 0.96 0.00 0.04
#> Prog_613 1 0.000 0.9502 1.00 0.00 0.00
#> Prog_596 2 0.000 1.0000 0.00 1.00 0.00
#> Prog_597 1 0.000 0.9502 1.00 0.00 0.00
#> Prog_604 1 0.000 0.9502 1.00 0.00 0.00
#> Prog_610 1 0.296 0.8721 0.90 0.00 0.10
#> Prog_611 1 0.296 0.8739 0.90 0.00 0.10
#> Prog_635 1 0.000 0.9502 1.00 0.00 0.00
#> Prog_644 2 0.000 1.0000 0.00 1.00 0.00
#> Prog_656 2 0.000 1.0000 0.00 1.00 0.00
#> Prog_662 2 0.000 1.0000 0.00 1.00 0.00
#> Prog_674 2 0.000 1.0000 0.00 1.00 0.00
#> Prog_676 1 0.000 0.9502 1.00 0.00 0.00
#> Prog_659 2 0.000 1.0000 0.00 1.00 0.00
#> Prog_666 3 0.000 0.9661 0.00 0.00 1.00
#> HSPC_706 2 0.000 1.0000 0.00 1.00 0.00
#> Prog_716 1 0.000 0.9502 1.00 0.00 0.00
#> Prog_711 1 0.480 0.7327 0.78 0.00 0.22
#> Prog_694 3 0.000 0.9661 0.00 0.00 1.00
#> Prog_689 2 0.000 1.0000 0.00 1.00 0.00
#> Prog_707 3 0.000 0.9661 0.00 0.00 1.00
#> Prog_690 2 0.000 1.0000 0.00 1.00 0.00
#> Prog_733 1 0.630 0.0955 0.52 0.48 0.00
#> Prog_745 2 0.000 1.0000 0.00 1.00 0.00
#> Prog_751 3 0.000 0.9661 0.00 0.00 1.00
#> Prog_740 3 0.000 0.9661 0.00 0.00 1.00
#> Prog_752 3 0.000 0.9661 0.00 0.00 1.00
#> Prog_758 3 0.000 0.9661 0.00 0.00 1.00
#> Prog_747 2 0.000 1.0000 0.00 1.00 0.00
#> Prog_724 2 0.000 1.0000 0.00 1.00 0.00
#> Prog_738 2 0.000 1.0000 0.00 1.00 0.00
#> Prog_744 2 0.000 1.0000 0.00 1.00 0.00
#> Prog_775 2 0.000 1.0000 0.00 1.00 0.00
#> Prog_799 3 0.000 0.9661 0.00 0.00 1.00
#> Prog_785 3 0.000 0.9661 0.00 0.00 1.00
#> Prog_806 2 0.000 1.0000 0.00 1.00 0.00
#> Prog_827 1 0.540 0.6368 0.72 0.00 0.28
#> Prog_851 3 0.000 0.9661 0.00 0.00 1.00
cbind(get_classes(res, k = 4), get_membership(res, k = 4))
#> class entropy silhouette p1 p2 p3 p4
#> HSPC_027 2 0.1637 0.8637 0.00 0.94 0.00 0.06
#> Prog_031 1 0.0707 0.9140 0.98 0.00 0.00 0.02
#> Prog_037 3 0.2921 0.7308 0.00 0.00 0.86 0.14
#> Prog_026 1 0.0707 0.9140 0.98 0.00 0.00 0.02
#> Prog_004 1 0.0000 0.9166 1.00 0.00 0.00 0.00
#> HSPC_070 2 0.1637 0.8637 0.00 0.94 0.00 0.06
#> Prog_072 1 0.0707 0.9140 0.98 0.00 0.00 0.02
#> LT-HSC_024 1 0.0000 0.9166 1.00 0.00 0.00 0.00
#> Prog_092 3 0.0707 0.7763 0.00 0.00 0.98 0.02
#> Prog_122 1 0.0000 0.9166 1.00 0.00 0.00 0.00
#> Prog_124 4 0.2345 0.7916 0.00 0.10 0.00 0.90
#> LT-HSC_036 1 0.0000 0.9166 1.00 0.00 0.00 0.00
#> Prog_142 2 0.0000 0.9032 0.00 1.00 0.00 0.00
#> Prog_154 1 0.0707 0.9140 0.98 0.00 0.00 0.02
#> Prog_161 3 0.1211 0.7740 0.00 0.00 0.96 0.04
#> Prog_131 1 0.0707 0.9140 0.98 0.00 0.00 0.02
#> HSPC_193 4 0.1411 0.7537 0.00 0.02 0.02 0.96
#> HSPC_183 2 0.0000 0.9032 0.00 1.00 0.00 0.00
#> HSPC_186 3 0.2647 0.7336 0.00 0.00 0.88 0.12
#> Prog_187 1 0.0000 0.9166 1.00 0.00 0.00 0.00
#> Prog_208 1 0.0000 0.9166 1.00 0.00 0.00 0.00
#> Prog_191 1 0.0707 0.9140 0.98 0.00 0.00 0.02
#> LT-HSC_063 4 0.2345 0.7916 0.00 0.10 0.00 0.90
#> Prog_247 1 0.5606 -0.0357 0.50 0.00 0.48 0.02
#> Prog_225 1 0.0000 0.9166 1.00 0.00 0.00 0.00
#> Prog_232 2 0.0707 0.8904 0.00 0.98 0.00 0.02
#> Prog_246 4 0.3975 0.6017 0.00 0.00 0.24 0.76
#> HSPC_291 2 0.0000 0.9032 0.00 1.00 0.00 0.00
#> Prog_271 4 0.3610 0.7560 0.00 0.20 0.00 0.80
#> Prog_280 2 0.0000 0.9032 0.00 1.00 0.00 0.00
#> Prog_293 3 0.7261 0.2433 0.00 0.16 0.50 0.34
#> LT-HSC_084 3 0.4491 0.6657 0.00 0.14 0.80 0.06
#> HSPC_299 2 0.0000 0.9032 0.00 1.00 0.00 0.00
#> HSPC_306 2 0.0000 0.9032 0.00 1.00 0.00 0.00
#> Prog_314 2 0.6611 -0.0254 0.04 0.48 0.46 0.02
#> HSPC_348 1 0.6323 0.0803 0.50 0.44 0.00 0.06
#> Prog_394 3 0.1637 0.7602 0.06 0.00 0.94 0.00
#> Prog_407 3 0.0707 0.7763 0.00 0.00 0.98 0.02
#> HSPC_447 2 0.0000 0.9032 0.00 1.00 0.00 0.00
#> Prog_439 1 0.0000 0.9166 1.00 0.00 0.00 0.00
#> Prog_463 1 0.0000 0.9166 1.00 0.00 0.00 0.00
#> Prog_459 1 0.0707 0.9140 0.98 0.00 0.00 0.02
#> Prog_448 3 0.7206 0.1058 0.00 0.14 0.46 0.40
#> Prog_467 1 0.0707 0.9140 0.98 0.00 0.00 0.02
#> Prog_431 1 0.3935 0.8278 0.86 0.02 0.06 0.06
#> Prog_481 2 0.2345 0.8115 0.00 0.90 0.00 0.10
#> Prog_496 1 0.0000 0.9166 1.00 0.00 0.00 0.00
#> Prog_517 4 0.4522 0.6111 0.00 0.32 0.00 0.68
#> Prog_513 1 0.0707 0.9050 0.98 0.00 0.02 0.00
#> Prog_585 1 0.0000 0.9166 1.00 0.00 0.00 0.00
#> Prog_568 3 0.7904 0.0970 0.30 0.00 0.36 0.34
#> Prog_556 1 0.2647 0.8130 0.88 0.00 0.12 0.00
#> Prog_594 3 0.4713 0.4281 0.36 0.00 0.64 0.00
#> Prog_613 1 0.0000 0.9166 1.00 0.00 0.00 0.00
#> Prog_596 4 0.2345 0.7916 0.00 0.10 0.00 0.90
#> Prog_597 1 0.3172 0.7957 0.84 0.00 0.00 0.16
#> Prog_604 1 0.0000 0.9166 1.00 0.00 0.00 0.00
#> Prog_610 3 0.4277 0.5839 0.28 0.00 0.72 0.00
#> Prog_611 1 0.4894 0.7052 0.78 0.00 0.10 0.12
#> Prog_635 1 0.0707 0.9140 0.98 0.00 0.00 0.02
#> Prog_644 2 0.6570 0.2897 0.10 0.58 0.00 0.32
#> Prog_656 4 0.2345 0.7916 0.00 0.10 0.00 0.90
#> Prog_662 4 0.4907 0.4140 0.00 0.42 0.00 0.58
#> Prog_674 4 0.4855 0.4098 0.00 0.40 0.00 0.60
#> Prog_676 1 0.0707 0.9140 0.98 0.00 0.00 0.02
#> Prog_659 2 0.2011 0.8376 0.00 0.92 0.00 0.08
#> Prog_666 4 0.3975 0.6017 0.00 0.00 0.24 0.76
#> HSPC_706 2 0.0000 0.9032 0.00 1.00 0.00 0.00
#> Prog_716 1 0.0707 0.9055 0.98 0.00 0.02 0.00
#> Prog_711 1 0.7179 0.1381 0.48 0.00 0.14 0.38
#> Prog_694 3 0.1637 0.7714 0.00 0.00 0.94 0.06
#> Prog_689 2 0.0000 0.9032 0.00 1.00 0.00 0.00
#> Prog_707 4 0.3801 0.5838 0.00 0.00 0.22 0.78
#> Prog_690 2 0.0707 0.8904 0.00 0.98 0.00 0.02
#> Prog_733 2 0.5535 0.2114 0.42 0.56 0.00 0.02
#> Prog_745 2 0.0000 0.9032 0.00 1.00 0.00 0.00
#> Prog_751 3 0.2647 0.7336 0.00 0.00 0.88 0.12
#> Prog_740 4 0.2921 0.6758 0.00 0.00 0.14 0.86
#> Prog_752 3 0.1411 0.7721 0.02 0.00 0.96 0.02
#> Prog_758 3 0.1411 0.7721 0.02 0.00 0.96 0.02
#> Prog_747 2 0.0000 0.9032 0.00 1.00 0.00 0.00
#> Prog_724 2 0.0000 0.9032 0.00 1.00 0.00 0.00
#> Prog_738 2 0.0000 0.9032 0.00 1.00 0.00 0.00
#> Prog_744 2 0.0000 0.9032 0.00 1.00 0.00 0.00
#> Prog_775 4 0.3400 0.7705 0.00 0.18 0.00 0.82
#> Prog_799 3 0.3400 0.6952 0.00 0.00 0.82 0.18
#> Prog_785 3 0.1211 0.7740 0.00 0.00 0.96 0.04
#> Prog_806 4 0.3172 0.7719 0.00 0.16 0.00 0.84
#> Prog_827 3 0.3172 0.6950 0.16 0.00 0.84 0.00
#> Prog_851 4 0.2647 0.6914 0.00 0.00 0.12 0.88
Heatmaps for the consensus matrix. It visualizes the probability of two samples to be in a same group.
consensus_heatmap(res, k = 2)
consensus_heatmap(res, k = 3)
consensus_heatmap(res, k = 4)
Heatmaps for the membership of samples in all partitions to see how consistent they are:
membership_heatmap(res, k = 2)
membership_heatmap(res, k = 3)
membership_heatmap(res, k = 4)
As soon as the classes for columns are determined, the signatures that are significantly different between subgroups can be looked for. Following are the heatmaps for signatures.
Signature heatmaps where rows are scaled:
Signature heatmaps where rows are not scaled:
get_signatures(res, k = 2, scale_rows = FALSE)
get_signatures(res, k = 3, scale_rows = FALSE)
get_signatures(res, k = 4, scale_rows = FALSE)
Compare the overlap of signatures from different k:
compare_signatures(res)
get_signature() returns a data frame invisibly. To get the list of signatures, the function
call should be assigned to a variable explicitly. In following code, if plot argument is set
to FALSE, no heatmap is plotted while only the differential analysis is performed.
# code only for demonstration
tb = get_signature(res, k = ..., plot = FALSE)
An example of the output of tb is:
#> which_row fdr mean_1 mean_2 scaled_mean_1 scaled_mean_2 km
#> 1 38 0.042760348 8.373488 9.131774 -0.5533452 0.5164555 1
#> 2 40 0.018707592 7.106213 8.469186 -0.6173731 0.5762149 1
#> 3 55 0.019134737 10.221463 11.207825 -0.6159697 0.5749050 1
#> 4 59 0.006059896 5.921854 7.869574 -0.6899429 0.6439467 1
#> 5 60 0.018055526 8.928898 10.211722 -0.6204761 0.5791110 1
#> 6 98 0.009384629 15.714769 14.887706 0.6635654 -0.6193277 2
...
The columns in tb are:
which_row: row indices corresponding to the input matrix.fdr: FDR for the differential test. mean_x: The mean value in group x.scaled_mean_x: The mean value in group x after rows are scaled.km: Row groups if k-means clustering is applied to rows (which is done by automatically selecting number of clusters).If there are too many signatures, top_signatures = ... can be set to only show the
signatures with the highest FDRs:
# code only for demonstration
# e.g. to show the top 500 most significant rows
tb = get_signature(res, k = ..., top_signatures = 500)
If the signatures are defined as these which are uniquely high in current group, diff_method argument
can be set to "uniquely_high_in_one_group":
# code only for demonstration
tb = get_signature(res, k = ..., diff_method = "uniquely_high_in_one_group")
UMAP plot which shows how samples are separated.
dimension_reduction(res, k = 2, method = "UMAP")
dimension_reduction(res, k = 3, method = "UMAP")
dimension_reduction(res, k = 4, method = "UMAP")
Following heatmap shows how subgroups are split when increasing k:
collect_classes(res)
If matrix rows can be associated to genes, consider to use functional_enrichment(res,
...) to perform function enrichment for the signature genes. See this vignette for more detailed explanations.
Parent node: Node0. Child nodes: Node011 , Node012 , Node013 , Node014 , Node021 , Node022-leaf , Node023-leaf , Node031 , Node032 , Node033 , Node041 , Node042 , Node043-leaf .
The object with results only for a single top-value method and a single partitioning method can be extracted as:
res = res_rh["04"]
A summary of res and all the functions that can be applied to it:
res
#> A 'ConsensusPartition' object with k = 2, 3, 4.
#> On a matrix with 17778 rows and 365 columns.
#> Top rows (1778) are extracted by 'ATC' method.
#> Subgroups are detected by 'skmeans' method.
#> Performed in total 150 partitions by row resampling.
#> Best k for subgroups seems to be 3.
#>
#> Following methods can be applied to this 'ConsensusPartition' object:
#> [1] "cola_report" "collect_classes" "collect_plots"
#> [4] "collect_stats" "colnames" "compare_partitions"
#> [7] "compare_signatures" "consensus_heatmap" "dimension_reduction"
#> [10] "functional_enrichment" "get_anno_col" "get_anno"
#> [13] "get_classes" "get_consensus" "get_matrix"
#> [16] "get_membership" "get_param" "get_signatures"
#> [19] "get_stats" "is_best_k" "is_stable_k"
#> [22] "membership_heatmap" "ncol" "nrow"
#> [25] "plot_ecdf" "predict_classes" "rownames"
#> [28] "select_partition_number" "show" "suggest_best_k"
#> [31] "test_to_known_factors" "top_rows_heatmap"
collect_plots() function collects all the plots made from res for all k (number of subgroups)
into one single page to provide an easy and fast comparison between different k.
collect_plots(res)
The plots are:
k and the heatmap of
predicted classes for each k.k.k.k.All the plots in panels can be made by individual functions and they are plotted later in this section.
select_partition_number() produces several plots showing different
statistics for choosing “optimized” k. There are following statistics:
k;k, the area increased is defined as \(A_k - A_{k-1}\).The detailed explanations of these statistics can be found in the cola vignette.
Generally speaking, higher 1-PAC score, higher mean silhouette score or higher
concordance corresponds to better partition. Rand index and Jaccard index
measure how similar the current partition is compared to partition with k-1.
If they are too similar, we won't accept k is better than k-1.
select_partition_number(res)
The numeric values for all these statistics can be obtained by get_stats().
get_stats(res)
#> k 1-PAC mean_silhouette concordance area_increased Rand Jaccard
#> 2 2 1.000 0.986 0.994 0.492 0.508 0.508
#> 3 3 1.000 0.970 0.988 0.312 0.809 0.638
#> 4 4 0.863 0.921 0.942 0.119 0.893 0.712
suggest_best_k() suggests the best \(k\) based on these statistics. The rules are as follows:
suggest_best_k(res)
#> [1] 3
#> attr(,"optional")
#> [1] 2
There is also optional best \(k\) = 2 that is worth to check.
Following is the table of the partitions (You need to click the show/hide
code output link to see it). The membership matrix (columns with name p*)
is inferred by
clue::cl_consensus()
function with the SE method. Basically the value in the membership matrix
represents the probability to belong to a certain group. The finall subgroup
label for an item is determined with the group with highest probability it
belongs to.
In get_classes() function, the entropy is calculated from the membership
matrix and the silhouette score is calculated from the consensus matrix.
cbind(get_classes(res, k = 2), get_membership(res, k = 2))
#> class entropy silhouette p1 p2
#> HSPC_025 2 0.000 0.99358 0.00 1.00
#> HSPC_037 2 0.000 0.99358 0.00 1.00
#> HSPC_008 2 0.000 0.99358 0.00 1.00
#> HSPC_020 2 0.000 0.99358 0.00 1.00
#> HSPC_026 1 0.000 0.99457 1.00 0.00
#> LT-HSC_002 2 0.000 0.99358 0.00 1.00
#> HSPC_022 1 0.000 0.99457 1.00 0.00
#> HSPC_011 2 0.000 0.99358 0.00 1.00
#> HSPC_023 2 0.000 0.99358 0.00 1.00
#> HSPC_041 2 0.000 0.99358 0.00 1.00
#> HSPC_012 2 0.000 0.99358 0.00 1.00
#> HSPC_018 2 0.000 0.99358 0.00 1.00
#> HSPC_006 1 0.000 0.99457 1.00 0.00
#> Prog_025 1 0.000 0.99457 1.00 0.00
#> LT-HSC_007 2 0.000 0.99358 0.00 1.00
#> Prog_001 2 0.000 0.99358 0.00 1.00
#> Prog_010 1 0.000 0.99457 1.00 0.00
#> Prog_016 1 0.000 0.99457 1.00 0.00
#> Prog_022 1 0.000 0.99457 1.00 0.00
#> Prog_040 1 0.000 0.99457 1.00 0.00
#> LT-HSC_010 1 0.000 0.99457 1.00 0.00
#> Prog_030 1 0.000 0.99457 1.00 0.00
#> Prog_036 1 0.000 0.99457 1.00 0.00
#> Prog_042 1 0.000 0.99457 1.00 0.00
#> LT-HSC_012 1 0.000 0.99457 1.00 0.00
#> HSPC_055 2 0.000 0.99358 0.00 1.00
#> HSPC_061 2 0.000 0.99358 0.00 1.00
#> HSPC_067 2 0.000 0.99358 0.00 1.00
#> HSPC_079 1 0.000 0.99457 1.00 0.00
#> HSPC_043 2 0.000 0.99358 0.00 1.00
#> HSPC_050 2 0.000 0.99358 0.00 1.00
#> HSPC_062 1 0.000 0.99457 1.00 0.00
#> HSPC_044 2 0.000 0.99358 0.00 1.00
#> HSPC_063 1 0.000 0.99457 1.00 0.00
#> HSPC_045 2 0.000 0.99358 0.00 1.00
#> HSPC_052 2 0.000 0.99358 0.00 1.00
#> HSPC_064 1 0.000 0.99457 1.00 0.00
#> HSPC_082 2 0.000 0.99358 0.00 1.00
#> HSPC_071 1 0.000 0.99457 1.00 0.00
#> HSPC_072 1 0.000 0.99457 1.00 0.00
#> HSPC_078 2 0.000 0.99358 0.00 1.00
#> HSPC_084 2 0.000 0.99358 0.00 1.00
#> Prog_062 2 0.000 0.99358 0.00 1.00
#> Prog_074 1 0.000 0.99457 1.00 0.00
#> Prog_080 2 0.000 0.99358 0.00 1.00
#> Prog_063 2 0.000 0.99358 0.00 1.00
#> LT-HSC_021 1 0.000 0.99457 1.00 0.00
#> Prog_052 2 0.000 0.99358 0.00 1.00
#> Prog_070 1 0.000 0.99457 1.00 0.00
#> Prog_054 1 0.000 0.99457 1.00 0.00
#> HSPC_109 2 0.584 0.83871 0.14 0.86
#> HSPC_085 2 0.000 0.99358 0.00 1.00
#> HSPC_098 2 0.000 0.99358 0.00 1.00
#> HSPC_110 2 0.000 0.99358 0.00 1.00
#> HSPC_099 2 0.000 0.99358 0.00 1.00
#> HSPC_117 2 0.000 0.99358 0.00 1.00
#> HSPC_107 2 0.000 0.99358 0.00 1.00
#> HSPC_096 2 0.000 0.99358 0.00 1.00
#> Prog_109 1 0.000 0.99457 1.00 0.00
#> Prog_118 1 0.000 0.99457 1.00 0.00
#> Prog_088 2 0.000 0.99358 0.00 1.00
#> Prog_108 1 0.000 0.99457 1.00 0.00
#> Prog_114 1 0.000 0.99457 1.00 0.00
#> HSPC_151 2 0.000 0.99358 0.00 1.00
#> HSPC_157 2 0.000 0.99358 0.00 1.00
#> HSPC_127 1 0.000 0.99457 1.00 0.00
#> HSPC_146 1 0.000 0.99457 1.00 0.00
#> HSPC_158 2 0.000 0.99358 0.00 1.00
#> HSPC_159 2 0.000 0.99358 0.00 1.00
#> HSPC_165 2 0.000 0.99358 0.00 1.00
#> HSPC_136 2 0.000 0.99358 0.00 1.00
#> HSPC_142 1 0.000 0.99457 1.00 0.00
#> HSPC_148 2 0.000 0.99358 0.00 1.00
#> HSPC_154 2 0.000 0.99358 0.00 1.00
#> HSPC_166 2 0.000 0.99358 0.00 1.00
#> HSPC_130 2 0.000 0.99358 0.00 1.00
#> HSPC_161 2 0.000 0.99358 0.00 1.00
#> HSPC_168 1 0.000 0.99457 1.00 0.00
#> Prog_134 2 0.000 0.99358 0.00 1.00
#> Prog_152 2 0.000 0.99358 0.00 1.00
#> LT-HSC_044 2 0.000 0.99358 0.00 1.00
#> Prog_159 1 0.000 0.99457 1.00 0.00
#> Prog_165 2 0.000 0.99358 0.00 1.00
#> LT-HSC_045 1 0.000 0.99457 1.00 0.00
#> Prog_149 1 0.000 0.99457 1.00 0.00
#> Prog_144 2 0.000 0.99358 0.00 1.00
#> Prog_162 1 0.000 0.99457 1.00 0.00
#> HSPC_175 2 0.141 0.97460 0.02 0.98
#> HSPC_169 2 0.000 0.99358 0.00 1.00
#> HSPC_190 1 0.000 0.99457 1.00 0.00
#> HSPC_196 2 0.000 0.99358 0.00 1.00
#> HSPC_203 2 0.000 0.99358 0.00 1.00
#> HSPC_180 2 0.000 0.99358 0.00 1.00
#> HSPC_204 1 0.000 0.99457 1.00 0.00
#> HSPC_210 2 0.000 0.99358 0.00 1.00
#> Prog_175 1 0.000 0.99457 1.00 0.00
#> Prog_193 2 0.000 0.99358 0.00 1.00
#> Prog_205 1 0.000 0.99457 1.00 0.00
#> Prog_182 2 0.000 0.99358 0.00 1.00
#> Prog_200 2 0.000 0.99358 0.00 1.00
#> Prog_177 2 0.000 0.99358 0.00 1.00
#> Prog_195 2 0.000 0.99358 0.00 1.00
#> Prog_201 1 0.000 0.99457 1.00 0.00
#> Prog_171 2 0.000 0.99358 0.00 1.00
#> Prog_173 2 0.000 0.99358 0.00 1.00
#> HSPC_211 2 0.000 0.99358 0.00 1.00
#> HSPC_230 2 0.000 0.99358 0.00 1.00
#> HSPC_236 2 0.000 0.99358 0.00 1.00
#> HSPC_219 1 1.000 -0.00963 0.50 0.50
#> HSPC_243 1 0.000 0.99457 1.00 0.00
#> HSPC_213 1 0.000 0.99457 1.00 0.00
#> HSPC_250 1 0.000 0.99457 1.00 0.00
#> HSPC_233 2 0.000 0.99358 0.00 1.00
#> HSPC_251 1 0.000 0.99457 1.00 0.00
#> HSPC_215 1 0.000 0.99457 1.00 0.00
#> HSPC_222 2 0.000 0.99358 0.00 1.00
#> Prog_223 2 0.000 0.99358 0.00 1.00
#> Prog_230 1 0.000 0.99457 1.00 0.00
#> Prog_248 2 0.000 0.99358 0.00 1.00
#> Prog_237 2 0.000 0.99358 0.00 1.00
#> Prog_213 2 0.795 0.68902 0.24 0.76
#> LT-HSC_070 2 0.000 0.99358 0.00 1.00
#> Prog_214 1 0.000 0.99457 1.00 0.00
#> HSPC_271 1 0.000 0.99457 1.00 0.00
#> HSPC_253 1 0.000 0.99457 1.00 0.00
#> HSPC_278 2 0.000 0.99358 0.00 1.00
#> HSPC_290 1 0.000 0.99457 1.00 0.00
#> HSPC_279 2 0.000 0.99358 0.00 1.00
#> HSPC_280 1 0.000 0.99457 1.00 0.00
#> HSPC_286 2 0.000 0.99358 0.00 1.00
#> HSPC_292 1 0.000 0.99457 1.00 0.00
#> LT-HSC_076 2 0.000 0.99358 0.00 1.00
#> HSPC_263 1 0.000 0.99457 1.00 0.00
#> HSPC_287 1 0.000 0.99457 1.00 0.00
#> HSPC_293 1 0.000 0.99457 1.00 0.00
#> HSPC_257 1 0.000 0.99457 1.00 0.00
#> HSPC_294 1 0.000 0.99457 1.00 0.00
#> Prog_283 2 0.000 0.99358 0.00 1.00
#> Prog_289 1 0.000 0.99457 1.00 0.00
#> Prog_291 1 0.000 0.99457 1.00 0.00
#> Prog_256 2 0.000 0.99358 0.00 1.00
#> HSPC_313 2 0.000 0.99358 0.00 1.00
#> HSPC_295 1 0.000 0.99457 1.00 0.00
#> HSPC_308 2 0.000 0.99358 0.00 1.00
#> HSPC_314 2 0.000 0.99358 0.00 1.00
#> HSPC_320 2 0.000 0.99358 0.00 1.00
#> LT-HSC_086 2 0.000 0.99358 0.00 1.00
#> HSPC_321 2 0.242 0.95464 0.04 0.96
#> HSPC_328 2 0.000 0.99358 0.00 1.00
#> LT-HSC_088 2 0.000 0.99358 0.00 1.00
#> HSPC_305 1 0.000 0.99457 1.00 0.00
#> HSPC_329 2 0.000 0.99358 0.00 1.00
#> HSPC_312 1 0.000 0.99457 1.00 0.00
#> Prog_301 1 0.000 0.99457 1.00 0.00
#> Prog_307 1 0.000 0.99457 1.00 0.00
#> Prog_313 1 0.000 0.99457 1.00 0.00
#> Prog_295 1 0.000 0.99457 1.00 0.00
#> Prog_315 1 0.000 0.99457 1.00 0.00
#> Prog_321 1 0.000 0.99457 1.00 0.00
#> Prog_333 2 0.000 0.99358 0.00 1.00
#> LT-HSC_093 2 0.000 0.99358 0.00 1.00
#> Prog_297 2 0.000 0.99358 0.00 1.00
#> Prog_310 1 0.000 0.99457 1.00 0.00
#> Prog_316 1 0.000 0.99457 1.00 0.00
#> Prog_322 2 0.000 0.99358 0.00 1.00
#> Prog_328 1 0.000 0.99457 1.00 0.00
#> LT-HSC_094 2 0.000 0.99358 0.00 1.00
#> Prog_305 1 0.000 0.99457 1.00 0.00
#> Prog_311 1 0.000 0.99457 1.00 0.00
#> Prog_323 1 0.000 0.99457 1.00 0.00
#> Prog_329 1 0.000 0.99457 1.00 0.00
#> Prog_335 1 0.000 0.99457 1.00 0.00
#> HSPC_344 1 0.000 0.99457 1.00 0.00
#> HSPC_356 2 0.000 0.99358 0.00 1.00
#> HSPC_362 1 0.000 0.99457 1.00 0.00
#> HSPC_368 1 0.000 0.99457 1.00 0.00
#> HSPC_345 2 0.000 0.99358 0.00 1.00
#> HSPC_351 2 0.000 0.99358 0.00 1.00
#> HSPC_352 1 0.000 0.99457 1.00 0.00
#> HSPC_358 1 0.000 0.99457 1.00 0.00
#> HSPC_364 2 0.000 0.99358 0.00 1.00
#> HSPC_376 2 0.680 0.78423 0.18 0.82
#> HSPC_377 1 0.000 0.99457 1.00 0.00
#> LT-HSC_101 1 0.000 0.99457 1.00 0.00
#> HSPC_360 2 0.000 0.99358 0.00 1.00
#> HSPC_372 2 0.000 0.99358 0.00 1.00
#> Prog_349 1 0.000 0.99457 1.00 0.00
#> Prog_355 1 0.000 0.99457 1.00 0.00
#> Prog_362 1 0.000 0.99457 1.00 0.00
#> Prog_345 1 0.000 0.99457 1.00 0.00
#> Prog_369 1 0.000 0.99457 1.00 0.00
#> LT-HSC_105 1 0.000 0.99457 1.00 0.00
#> Prog_370 1 0.000 0.99457 1.00 0.00
#> LT-HSC_106 1 0.000 0.99457 1.00 0.00
#> Prog_354 1 0.000 0.99457 1.00 0.00
#> HSPC_403 2 0.680 0.78349 0.18 0.82
#> HSPC_421 2 0.402 0.91167 0.08 0.92
#> HSPC_386 2 0.000 0.99358 0.00 1.00
#> HSPC_387 1 0.000 0.99457 1.00 0.00
#> HSPC_393 1 0.000 0.99457 1.00 0.00
#> HSPC_400 1 0.000 0.99457 1.00 0.00
#> HSPC_406 2 0.000 0.99358 0.00 1.00
#> HSPC_424 1 0.000 0.99457 1.00 0.00
#> HSPC_395 2 0.000 0.99358 0.00 1.00
#> HSPC_413 2 0.000 0.99358 0.00 1.00
#> HSPC_425 1 0.000 0.99457 1.00 0.00
#> HSPC_390 2 0.000 0.99358 0.00 1.00
#> HSPC_426 2 0.000 0.99358 0.00 1.00
#> Prog_422 1 0.000 0.99457 1.00 0.00
#> Prog_411 2 0.000 0.99358 0.00 1.00
#> Prog_417 1 0.000 0.99457 1.00 0.00
#> Prog_423 1 0.000 0.99457 1.00 0.00
#> Prog_390 2 0.000 0.99358 0.00 1.00
#> Prog_402 1 0.000 0.99457 1.00 0.00
#> Prog_384 1 0.000 0.99457 1.00 0.00
#> HSPC_440 2 0.000 0.99358 0.00 1.00
#> HSPC_466 2 0.000 0.99358 0.00 1.00
#> HSPC_461 2 0.000 0.99358 0.00 1.00
#> Prog_440 2 0.000 0.99358 0.00 1.00
#> Prog_458 2 0.000 0.99358 0.00 1.00
#> Prog_435 1 0.000 0.99457 1.00 0.00
#> Prog_465 2 0.000 0.99358 0.00 1.00
#> Prog_454 1 0.000 0.99457 1.00 0.00
#> Prog_460 2 0.795 0.68844 0.24 0.76
#> Prog_466 1 0.000 0.99457 1.00 0.00
#> Prog_462 2 0.000 0.99358 0.00 1.00
#> Prog_468 1 0.000 0.99457 1.00 0.00
#> LT-HSC_120 1 0.000 0.99457 1.00 0.00
#> Prog_432 2 0.000 0.99358 0.00 1.00
#> HSPC_505 2 0.000 0.99358 0.00 1.00
#> LT-HSC_122 2 0.000 0.99358 0.00 1.00
#> HSPC_489 2 0.000 0.99358 0.00 1.00
#> HSPC_495 2 0.000 0.99358 0.00 1.00
#> HSPC_491 1 0.000 0.99457 1.00 0.00
#> HSPC_509 2 0.000 0.99358 0.00 1.00
#> HSPC_486 2 0.000 0.99358 0.00 1.00
#> HSPC_510 1 0.000 0.99457 1.00 0.00
#> Prog_469 2 0.000 0.99358 0.00 1.00
#> Prog_494 2 0.000 0.99358 0.00 1.00
#> Prog_483 2 0.000 0.99358 0.00 1.00
#> Prog_507 1 0.000 0.99457 1.00 0.00
#> Prog_490 2 0.000 0.99358 0.00 1.00
#> Prog_472 2 0.000 0.99358 0.00 1.00
#> Prog_497 1 0.000 0.99457 1.00 0.00
#> Prog_503 2 0.000 0.99358 0.00 1.00
#> Prog_510 2 0.000 0.99358 0.00 1.00
#> HSPC_537 2 0.000 0.99358 0.00 1.00
#> HSPC_543 2 0.000 0.99358 0.00 1.00
#> HSPC_520 2 0.000 0.99358 0.00 1.00
#> HSPC_532 1 0.000 0.99457 1.00 0.00
#> HSPC_550 2 0.000 0.99358 0.00 1.00
#> HSPC_551 2 0.000 0.99358 0.00 1.00
#> HSPC_528 1 0.000 0.99457 1.00 0.00
#> HSPC_552 2 0.000 0.99358 0.00 1.00
#> Prog_518 1 0.000 0.99457 1.00 0.00
#> Prog_524 2 0.000 0.99358 0.00 1.00
#> Prog_542 1 0.000 0.99457 1.00 0.00
#> Prog_512 1 0.000 0.99457 1.00 0.00
#> Prog_519 2 0.000 0.99358 0.00 1.00
#> Prog_525 2 0.000 0.99358 0.00 1.00
#> Prog_549 1 0.000 0.99457 1.00 0.00
#> Prog_539 1 0.000 0.99457 1.00 0.00
#> Prog_515 2 0.000 0.99358 0.00 1.00
#> Prog_534 1 0.000 0.99457 1.00 0.00
#> Prog_552 1 0.000 0.99457 1.00 0.00
#> LT-HSC_144 2 0.680 0.78359 0.18 0.82
#> HSPC_590 2 0.000 0.99358 0.00 1.00
#> LT-HSC_148 2 0.000 0.99358 0.00 1.00
#> HSPC_569 1 0.000 0.99457 1.00 0.00
#> Prog_553 2 0.000 0.99358 0.00 1.00
#> Prog_578 1 0.000 0.99457 1.00 0.00
#> Prog_561 2 0.000 0.99358 0.00 1.00
#> Prog_586 2 0.000 0.99358 0.00 1.00
#> Prog_570 1 0.000 0.99457 1.00 0.00
#> HSPC_601 2 0.000 0.99358 0.00 1.00
#> HSPC_613 2 0.000 0.99358 0.00 1.00
#> HSPC_631 1 0.000 0.99457 1.00 0.00
#> HSPC_614 2 0.000 0.99358 0.00 1.00
#> HSPC_596 2 0.000 0.99358 0.00 1.00
#> HSPC_627 2 0.000 0.99358 0.00 1.00
#> LT-HSC_159 1 0.000 0.99457 1.00 0.00
#> HSPC_597 2 0.000 0.99358 0.00 1.00
#> HSPC_628 2 0.000 0.99358 0.00 1.00
#> HSPC_634 2 0.000 0.99358 0.00 1.00
#> HSPC_598 2 0.000 0.99358 0.00 1.00
#> HSPC_623 2 0.000 0.99358 0.00 1.00
#> HSPC_629 2 0.000 0.99358 0.00 1.00
#> HSPC_635 2 0.000 0.99358 0.00 1.00
#> Prog_625 1 0.000 0.99457 1.00 0.00
#> Prog_620 2 0.000 0.99358 0.00 1.00
#> Prog_615 1 0.000 0.99457 1.00 0.00
#> Prog_633 2 0.000 0.99358 0.00 1.00
#> Prog_634 2 0.000 0.99358 0.00 1.00
#> LT-HSC_166 1 0.327 0.93171 0.94 0.06
#> HSPC_643 2 0.000 0.99358 0.00 1.00
#> HSPC_661 2 0.000 0.99358 0.00 1.00
#> LT-HSC_170 2 0.000 0.99358 0.00 1.00
#> HSPC_651 1 0.000 0.99457 1.00 0.00
#> HSPC_663 1 0.000 0.99457 1.00 0.00
#> LT-HSC_171 2 0.000 0.99358 0.00 1.00
#> HSPC_652 2 0.000 0.99358 0.00 1.00
#> HSPC_658 1 0.000 0.99457 1.00 0.00
#> HSPC_665 2 0.000 0.99358 0.00 1.00
#> HSPC_654 2 0.000 0.99358 0.00 1.00
#> HSPC_660 2 0.000 0.99358 0.00 1.00
#> HSPC_666 1 0.000 0.99457 1.00 0.00
#> Prog_643 1 0.000 0.99457 1.00 0.00
#> Prog_667 2 0.000 0.99358 0.00 1.00
#> Prog_673 2 0.000 0.99358 0.00 1.00
#> Prog_645 2 0.000 0.99358 0.00 1.00
#> Prog_647 2 0.000 0.99358 0.00 1.00
#> Prog_653 2 0.000 0.99358 0.00 1.00
#> Prog_648 2 0.000 0.99358 0.00 1.00
#> Prog_678 1 0.000 0.99457 1.00 0.00
#> LT-HSC_180 2 0.000 0.99358 0.00 1.00
#> HSPC_697 1 0.000 0.99457 1.00 0.00
#> HSPC_717 1 0.000 0.99457 1.00 0.00
#> HSPC_681 2 0.000 0.99358 0.00 1.00
#> HSPC_700 1 0.000 0.99457 1.00 0.00
#> HSPC_701 2 0.000 0.99358 0.00 1.00
#> HSPC_707 1 0.855 0.60798 0.72 0.28
#> HSPC_683 1 0.000 0.99457 1.00 0.00
#> HSPC_696 2 0.000 0.99358 0.00 1.00
#> Prog_703 2 0.000 0.99358 0.00 1.00
#> Prog_686 1 0.000 0.99457 1.00 0.00
#> Prog_696 1 0.000 0.99457 1.00 0.00
#> HSPC_735 2 0.000 0.99358 0.00 1.00
#> HSPC_760 2 0.141 0.97460 0.02 0.98
#> HSPC_731 1 0.000 0.99457 1.00 0.00
#> HSPC_744 2 0.000 0.99358 0.00 1.00
#> HSPC_762 2 0.000 0.99358 0.00 1.00
#> Prog_739 1 0.000 0.99457 1.00 0.00
#> Prog_757 1 0.000 0.99457 1.00 0.00
#> Prog_746 1 0.000 0.99457 1.00 0.00
#> Prog_748 1 0.000 0.99457 1.00 0.00
#> Prog_749 2 0.000 0.99358 0.00 1.00
#> Prog_761 1 0.000 0.99457 1.00 0.00
#> Prog_732 2 0.000 0.99358 0.00 1.00
#> Prog_750 1 0.000 0.99457 1.00 0.00
#> Prog_756 2 0.000 0.99358 0.00 1.00
#> HSPC_770 2 0.000 0.99358 0.00 1.00
#> HSPC_800 1 0.000 0.99457 1.00 0.00
#> HSPC_789 2 0.000 0.99358 0.00 1.00
#> LT-HSC_207 2 0.000 0.99358 0.00 1.00
#> HSPC_772 2 0.000 0.99358 0.00 1.00
#> HSPC_790 2 0.000 0.99358 0.00 1.00
#> HSPC_779 2 0.000 0.99358 0.00 1.00
#> HSPC_791 2 0.000 0.99358 0.00 1.00
#> Prog_787 2 0.000 0.99358 0.00 1.00
#> LT-HSC_211 2 0.000 0.99358 0.00 1.00
#> Prog_796 1 0.000 0.99457 1.00 0.00
#> Prog_803 2 0.000 0.99358 0.00 1.00
#> LT-HSC_216 1 0.000 0.99457 1.00 0.00
#> HSPC_841 2 0.000 0.99358 0.00 1.00
#> HSPC_819 2 0.000 0.99358 0.00 1.00
#> HSPC_837 1 0.000 0.99457 1.00 0.00
#> HSPC_814 1 0.000 0.99457 1.00 0.00
#> HSPC_821 2 0.000 0.99358 0.00 1.00
#> HSPC_839 1 0.000 0.99457 1.00 0.00
#> HSPC_816 2 0.000 0.99358 0.00 1.00
#> HSPC_846 2 0.000 0.99358 0.00 1.00
#> Prog_841 1 0.000 0.99457 1.00 0.00
#> Prog_805 2 0.000 0.99358 0.00 1.00
#> Prog_849 2 0.000 0.99358 0.00 1.00
#> Prog_852 1 0.000 0.99457 1.00 0.00
cbind(get_classes(res, k = 3), get_membership(res, k = 3))
#> class entropy silhouette p1 p2 p3
#> HSPC_025 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_037 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_008 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_020 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_026 1 0.0000 0.98965 1.00 0.00 0.00
#> LT-HSC_002 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_022 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_011 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_023 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_041 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_012 2 0.5397 0.60819 0.00 0.72 0.28
#> HSPC_018 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_006 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_025 1 0.0000 0.98965 1.00 0.00 0.00
#> LT-HSC_007 2 0.0000 0.98830 0.00 1.00 0.00
#> Prog_001 3 0.0000 0.98077 0.00 0.00 1.00
#> Prog_010 1 0.2959 0.88341 0.90 0.00 0.10
#> Prog_016 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_022 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_040 2 0.0892 0.96708 0.02 0.98 0.00
#> LT-HSC_010 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_030 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_036 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_042 1 0.0000 0.98965 1.00 0.00 0.00
#> LT-HSC_012 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_055 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_061 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_067 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_079 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_043 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_050 3 0.0000 0.98077 0.00 0.00 1.00
#> HSPC_062 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_044 3 0.0000 0.98077 0.00 0.00 1.00
#> HSPC_063 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_045 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_052 3 0.0000 0.98077 0.00 0.00 1.00
#> HSPC_064 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_082 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_071 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_072 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_078 3 0.0000 0.98077 0.00 0.00 1.00
#> HSPC_084 2 0.0000 0.98830 0.00 1.00 0.00
#> Prog_062 2 0.0000 0.98830 0.00 1.00 0.00
#> Prog_074 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_080 3 0.0000 0.98077 0.00 0.00 1.00
#> Prog_063 3 0.0000 0.98077 0.00 0.00 1.00
#> LT-HSC_021 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_052 3 0.0000 0.98077 0.00 0.00 1.00
#> Prog_070 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_054 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_109 3 0.0000 0.98077 0.00 0.00 1.00
#> HSPC_085 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_098 3 0.0000 0.98077 0.00 0.00 1.00
#> HSPC_110 3 0.0000 0.98077 0.00 0.00 1.00
#> HSPC_099 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_117 2 0.2066 0.92933 0.00 0.94 0.06
#> HSPC_107 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_096 3 0.0000 0.98077 0.00 0.00 1.00
#> Prog_109 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_118 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_088 3 0.0000 0.98077 0.00 0.00 1.00
#> Prog_108 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_114 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_151 2 0.0892 0.96998 0.00 0.98 0.02
#> HSPC_157 3 0.0000 0.98077 0.00 0.00 1.00
#> HSPC_127 1 0.1529 0.94632 0.96 0.04 0.00
#> HSPC_146 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_158 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_159 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_165 3 0.0000 0.98077 0.00 0.00 1.00
#> HSPC_136 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_142 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_148 3 0.0000 0.98077 0.00 0.00 1.00
#> HSPC_154 3 0.0000 0.98077 0.00 0.00 1.00
#> HSPC_166 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_130 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_161 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_168 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_134 3 0.0000 0.98077 0.00 0.00 1.00
#> Prog_152 3 0.4555 0.74862 0.00 0.20 0.80
#> LT-HSC_044 3 0.0000 0.98077 0.00 0.00 1.00
#> Prog_159 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_165 3 0.0000 0.98077 0.00 0.00 1.00
#> LT-HSC_045 1 0.1529 0.95056 0.96 0.00 0.04
#> Prog_149 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_144 3 0.2959 0.88162 0.00 0.10 0.90
#> Prog_162 1 0.5560 0.57272 0.70 0.00 0.30
#> HSPC_175 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_169 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_190 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_196 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_203 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_180 3 0.0000 0.98077 0.00 0.00 1.00
#> HSPC_204 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_210 3 0.0000 0.98077 0.00 0.00 1.00
#> Prog_175 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_193 2 0.0000 0.98830 0.00 1.00 0.00
#> Prog_205 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_182 3 0.0000 0.98077 0.00 0.00 1.00
#> Prog_200 3 0.0000 0.98077 0.00 0.00 1.00
#> Prog_177 2 0.0000 0.98830 0.00 1.00 0.00
#> Prog_195 2 0.0000 0.98830 0.00 1.00 0.00
#> Prog_201 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_171 2 0.0000 0.98830 0.00 1.00 0.00
#> Prog_173 3 0.0000 0.98077 0.00 0.00 1.00
#> HSPC_211 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_230 2 0.0892 0.97012 0.00 0.98 0.02
#> HSPC_236 3 0.0000 0.98077 0.00 0.00 1.00
#> HSPC_219 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_243 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_213 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_250 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_233 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_251 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_215 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_222 2 0.0000 0.98830 0.00 1.00 0.00
#> Prog_223 2 0.0000 0.98830 0.00 1.00 0.00
#> Prog_230 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_248 3 0.0000 0.98077 0.00 0.00 1.00
#> Prog_237 2 0.0000 0.98830 0.00 1.00 0.00
#> Prog_213 3 0.0000 0.98077 0.00 0.00 1.00
#> LT-HSC_070 3 0.0000 0.98077 0.00 0.00 1.00
#> Prog_214 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_271 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_253 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_278 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_290 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_279 3 0.0000 0.98077 0.00 0.00 1.00
#> HSPC_280 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_286 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_292 1 0.0000 0.98965 1.00 0.00 0.00
#> LT-HSC_076 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_263 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_287 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_293 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_257 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_294 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_283 2 0.0000 0.98830 0.00 1.00 0.00
#> Prog_289 1 0.0892 0.97065 0.98 0.00 0.02
#> Prog_291 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_256 2 0.0892 0.97014 0.00 0.98 0.02
#> HSPC_313 2 0.5397 0.60674 0.00 0.72 0.28
#> HSPC_295 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_308 3 0.0000 0.98077 0.00 0.00 1.00
#> HSPC_314 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_320 3 0.0000 0.98077 0.00 0.00 1.00
#> LT-HSC_086 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_321 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_328 2 0.0000 0.98830 0.00 1.00 0.00
#> LT-HSC_088 3 0.0000 0.98077 0.00 0.00 1.00
#> HSPC_305 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_329 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_312 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_301 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_307 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_313 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_295 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_315 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_321 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_333 3 0.0000 0.98077 0.00 0.00 1.00
#> LT-HSC_093 2 0.0000 0.98830 0.00 1.00 0.00
#> Prog_297 3 0.0000 0.98077 0.00 0.00 1.00
#> Prog_310 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_316 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_322 3 0.0000 0.98077 0.00 0.00 1.00
#> Prog_328 1 0.0000 0.98965 1.00 0.00 0.00
#> LT-HSC_094 2 0.0000 0.98830 0.00 1.00 0.00
#> Prog_305 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_311 3 0.0000 0.98077 0.00 0.00 1.00
#> Prog_323 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_329 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_335 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_344 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_356 3 0.0000 0.98077 0.00 0.00 1.00
#> HSPC_362 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_368 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_345 3 0.0000 0.98077 0.00 0.00 1.00
#> HSPC_351 3 0.0000 0.98077 0.00 0.00 1.00
#> HSPC_352 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_358 2 0.0892 0.96708 0.02 0.98 0.00
#> HSPC_364 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_376 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_377 1 0.0000 0.98965 1.00 0.00 0.00
#> LT-HSC_101 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_360 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_372 2 0.0000 0.98830 0.00 1.00 0.00
#> Prog_349 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_355 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_362 1 0.6045 0.38496 0.62 0.38 0.00
#> Prog_345 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_369 1 0.0000 0.98965 1.00 0.00 0.00
#> LT-HSC_105 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_370 1 0.0000 0.98965 1.00 0.00 0.00
#> LT-HSC_106 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_354 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_403 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_421 3 0.0000 0.98077 0.00 0.00 1.00
#> HSPC_386 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_387 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_393 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_400 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_406 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_424 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_395 3 0.0000 0.98077 0.00 0.00 1.00
#> HSPC_413 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_425 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_390 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_426 2 0.0000 0.98830 0.00 1.00 0.00
#> Prog_422 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_411 2 0.0000 0.98830 0.00 1.00 0.00
#> Prog_417 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_423 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_390 3 0.0000 0.98077 0.00 0.00 1.00
#> Prog_402 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_384 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_440 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_466 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_461 2 0.0000 0.98830 0.00 1.00 0.00
#> Prog_440 3 0.0000 0.98077 0.00 0.00 1.00
#> Prog_458 3 0.0000 0.98077 0.00 0.00 1.00
#> Prog_435 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_465 3 0.0000 0.98077 0.00 0.00 1.00
#> Prog_454 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_460 2 0.2066 0.92094 0.06 0.94 0.00
#> Prog_466 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_462 2 0.0000 0.98830 0.00 1.00 0.00
#> Prog_468 1 0.0000 0.98965 1.00 0.00 0.00
#> LT-HSC_120 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_432 3 0.6280 0.15425 0.00 0.46 0.54
#> HSPC_505 2 0.0000 0.98830 0.00 1.00 0.00
#> LT-HSC_122 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_489 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_495 3 0.0000 0.98077 0.00 0.00 1.00
#> HSPC_491 1 0.6244 0.21420 0.56 0.44 0.00
#> HSPC_509 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_486 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_510 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_469 2 0.2959 0.88443 0.00 0.90 0.10
#> Prog_494 3 0.0000 0.98077 0.00 0.00 1.00
#> Prog_483 3 0.0000 0.98077 0.00 0.00 1.00
#> Prog_507 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_490 3 0.0000 0.98077 0.00 0.00 1.00
#> Prog_472 3 0.2537 0.90330 0.00 0.08 0.92
#> Prog_497 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_503 3 0.0000 0.98077 0.00 0.00 1.00
#> Prog_510 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_537 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_543 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_520 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_532 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_550 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_551 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_528 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_552 2 0.0000 0.98830 0.00 1.00 0.00
#> Prog_518 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_524 2 0.0000 0.98830 0.00 1.00 0.00
#> Prog_542 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_512 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_519 2 0.0000 0.98830 0.00 1.00 0.00
#> Prog_525 3 0.0000 0.98077 0.00 0.00 1.00
#> Prog_549 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_539 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_515 3 0.0000 0.98077 0.00 0.00 1.00
#> Prog_534 3 0.0000 0.98077 0.00 0.00 1.00
#> Prog_552 1 0.0000 0.98965 1.00 0.00 0.00
#> LT-HSC_144 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_590 2 0.0000 0.98830 0.00 1.00 0.00
#> LT-HSC_148 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_569 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_553 3 0.0000 0.98077 0.00 0.00 1.00
#> Prog_578 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_561 2 0.0000 0.98830 0.00 1.00 0.00
#> Prog_586 3 0.2959 0.88080 0.00 0.10 0.90
#> Prog_570 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_601 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_613 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_631 1 0.2066 0.92334 0.94 0.06 0.00
#> HSPC_614 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_596 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_627 2 0.0000 0.98830 0.00 1.00 0.00
#> LT-HSC_159 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_597 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_628 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_634 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_598 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_623 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_629 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_635 2 0.0000 0.98830 0.00 1.00 0.00
#> Prog_625 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_620 2 0.0000 0.98830 0.00 1.00 0.00
#> Prog_615 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_633 3 0.0000 0.98077 0.00 0.00 1.00
#> Prog_634 3 0.0000 0.98077 0.00 0.00 1.00
#> LT-HSC_166 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_643 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_661 2 0.0000 0.98830 0.00 1.00 0.00
#> LT-HSC_170 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_651 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_663 1 0.0000 0.98965 1.00 0.00 0.00
#> LT-HSC_171 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_652 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_658 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_665 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_654 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_660 3 0.0000 0.98077 0.00 0.00 1.00
#> HSPC_666 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_643 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_667 3 0.0000 0.98077 0.00 0.00 1.00
#> Prog_673 2 0.0000 0.98830 0.00 1.00 0.00
#> Prog_645 3 0.0000 0.98077 0.00 0.00 1.00
#> Prog_647 3 0.0000 0.98077 0.00 0.00 1.00
#> Prog_653 3 0.0000 0.98077 0.00 0.00 1.00
#> Prog_648 2 0.0000 0.98830 0.00 1.00 0.00
#> Prog_678 1 0.0000 0.98965 1.00 0.00 0.00
#> LT-HSC_180 3 0.0000 0.98077 0.00 0.00 1.00
#> HSPC_697 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_717 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_681 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_700 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_701 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_707 2 0.6126 0.32586 0.40 0.60 0.00
#> HSPC_683 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_696 3 0.0000 0.98077 0.00 0.00 1.00
#> Prog_703 3 0.0000 0.98077 0.00 0.00 1.00
#> Prog_686 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_696 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_735 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_760 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_731 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_744 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_762 2 0.0000 0.98830 0.00 1.00 0.00
#> Prog_739 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_757 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_746 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_748 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_749 3 0.0000 0.98077 0.00 0.00 1.00
#> Prog_761 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_732 3 0.0000 0.98077 0.00 0.00 1.00
#> Prog_750 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_756 3 0.0000 0.98077 0.00 0.00 1.00
#> HSPC_770 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_800 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_789 2 0.0000 0.98830 0.00 1.00 0.00
#> LT-HSC_207 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_772 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_790 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_779 2 0.2066 0.92947 0.00 0.94 0.06
#> HSPC_791 3 0.6309 0.00462 0.00 0.50 0.50
#> Prog_787 3 0.0000 0.98077 0.00 0.00 1.00
#> LT-HSC_211 2 0.0000 0.98830 0.00 1.00 0.00
#> Prog_796 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_803 3 0.0000 0.98077 0.00 0.00 1.00
#> LT-HSC_216 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_841 3 0.0000 0.98077 0.00 0.00 1.00
#> HSPC_819 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_837 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_814 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_821 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_839 1 0.0000 0.98965 1.00 0.00 0.00
#> HSPC_816 2 0.0000 0.98830 0.00 1.00 0.00
#> HSPC_846 2 0.0000 0.98830 0.00 1.00 0.00
#> Prog_841 1 0.0000 0.98965 1.00 0.00 0.00
#> Prog_805 2 0.0000 0.98830 0.00 1.00 0.00
#> Prog_849 2 0.4291 0.77793 0.00 0.82 0.18
#> Prog_852 1 0.0000 0.98965 1.00 0.00 0.00
cbind(get_classes(res, k = 4), get_membership(res, k = 4))
#> class entropy silhouette p1 p2 p3 p4
#> HSPC_025 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_037 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_008 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_020 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_026 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> LT-HSC_002 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_022 1 0.2345 0.8702 0.90 0.00 0.00 0.10
#> HSPC_011 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_023 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_041 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_012 2 0.2647 0.8513 0.00 0.88 0.12 0.00
#> HSPC_018 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_006 1 0.2921 0.8471 0.86 0.00 0.00 0.14
#> Prog_025 4 0.3172 0.9920 0.16 0.00 0.00 0.84
#> LT-HSC_007 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> Prog_001 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> Prog_010 1 0.2647 0.8003 0.88 0.00 0.12 0.00
#> Prog_016 4 0.3172 0.9920 0.16 0.00 0.00 0.84
#> Prog_022 4 0.3172 0.9920 0.16 0.00 0.00 0.84
#> Prog_040 1 0.3172 0.8350 0.84 0.00 0.00 0.16
#> LT-HSC_010 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> Prog_030 4 0.3172 0.9920 0.16 0.00 0.00 0.84
#> Prog_036 1 0.2011 0.8378 0.92 0.00 0.00 0.08
#> Prog_042 4 0.3172 0.9920 0.16 0.00 0.00 0.84
#> LT-HSC_012 4 0.3172 0.9920 0.16 0.00 0.00 0.84
#> HSPC_055 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_061 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_067 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_079 1 0.2647 0.8588 0.88 0.00 0.00 0.12
#> HSPC_043 2 0.3172 0.8576 0.00 0.84 0.00 0.16
#> HSPC_050 3 0.0707 0.9607 0.00 0.02 0.98 0.00
#> HSPC_062 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> HSPC_044 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> HSPC_063 1 0.4522 0.3755 0.68 0.00 0.00 0.32
#> HSPC_045 2 0.3172 0.8576 0.00 0.84 0.00 0.16
#> HSPC_052 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> HSPC_064 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> HSPC_082 2 0.2921 0.8727 0.00 0.86 0.00 0.14
#> HSPC_071 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> HSPC_072 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> HSPC_078 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> HSPC_084 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> Prog_062 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> Prog_074 4 0.4277 0.8274 0.28 0.00 0.00 0.72
#> Prog_080 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> Prog_063 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> LT-HSC_021 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> Prog_052 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> Prog_070 1 0.3172 0.8350 0.84 0.00 0.00 0.16
#> Prog_054 4 0.3172 0.9920 0.16 0.00 0.00 0.84
#> HSPC_109 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> HSPC_085 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_098 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> HSPC_110 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> HSPC_099 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_117 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_107 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_096 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> Prog_109 4 0.3400 0.9686 0.18 0.00 0.00 0.82
#> Prog_118 1 0.3172 0.8350 0.84 0.00 0.00 0.16
#> Prog_088 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> Prog_108 4 0.3172 0.9920 0.16 0.00 0.00 0.84
#> Prog_114 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> HSPC_151 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_157 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> HSPC_127 1 0.3172 0.8350 0.84 0.00 0.00 0.16
#> HSPC_146 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> HSPC_158 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_159 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_165 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> HSPC_136 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_142 1 0.6497 0.5860 0.64 0.20 0.00 0.16
#> HSPC_148 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> HSPC_154 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> HSPC_166 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_130 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_161 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_168 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> Prog_134 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> Prog_152 3 0.3975 0.6799 0.00 0.24 0.76 0.00
#> LT-HSC_044 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> Prog_159 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> Prog_165 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> LT-HSC_045 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> Prog_149 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> Prog_144 3 0.4855 0.3531 0.00 0.40 0.60 0.00
#> Prog_162 1 0.6382 0.3626 0.58 0.00 0.34 0.08
#> HSPC_175 2 0.4581 0.8093 0.08 0.80 0.00 0.12
#> HSPC_169 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_190 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> HSPC_196 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_203 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_180 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> HSPC_204 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> HSPC_210 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> Prog_175 4 0.3172 0.9920 0.16 0.00 0.00 0.84
#> Prog_193 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> Prog_205 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> Prog_182 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> Prog_200 3 0.0707 0.9607 0.00 0.02 0.98 0.00
#> Prog_177 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> Prog_195 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> Prog_201 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> Prog_171 2 0.3172 0.8576 0.00 0.84 0.00 0.16
#> Prog_173 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> HSPC_211 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_230 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_236 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> HSPC_219 2 0.3172 0.8576 0.00 0.84 0.00 0.16
#> HSPC_243 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> HSPC_213 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> HSPC_250 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> HSPC_233 2 0.2011 0.9139 0.00 0.92 0.00 0.08
#> HSPC_251 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> HSPC_215 1 0.4277 0.4834 0.72 0.00 0.00 0.28
#> HSPC_222 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> Prog_223 2 0.3172 0.8576 0.00 0.84 0.00 0.16
#> Prog_230 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> Prog_248 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> Prog_237 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> Prog_213 3 0.0707 0.9626 0.00 0.00 0.98 0.02
#> LT-HSC_070 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> Prog_214 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> HSPC_271 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> HSPC_253 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> HSPC_278 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_290 1 0.2011 0.8805 0.92 0.00 0.00 0.08
#> HSPC_279 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> HSPC_280 1 0.3172 0.8350 0.84 0.00 0.00 0.16
#> HSPC_286 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_292 1 0.3172 0.8350 0.84 0.00 0.00 0.16
#> LT-HSC_076 2 0.1211 0.9384 0.00 0.96 0.00 0.04
#> HSPC_263 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> HSPC_287 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> HSPC_293 1 0.3172 0.8350 0.84 0.00 0.00 0.16
#> HSPC_257 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> HSPC_294 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> Prog_283 2 0.0707 0.9499 0.00 0.98 0.00 0.02
#> Prog_289 1 0.7310 -0.1666 0.48 0.00 0.16 0.36
#> Prog_291 4 0.3172 0.9920 0.16 0.00 0.00 0.84
#> Prog_256 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_313 2 0.2345 0.8747 0.00 0.90 0.10 0.00
#> HSPC_295 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> HSPC_308 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> HSPC_314 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_320 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> LT-HSC_086 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_321 2 0.3172 0.8576 0.00 0.84 0.00 0.16
#> HSPC_328 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> LT-HSC_088 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> HSPC_305 1 0.1211 0.8986 0.96 0.00 0.00 0.04
#> HSPC_329 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_312 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> Prog_301 4 0.3172 0.9920 0.16 0.00 0.00 0.84
#> Prog_307 4 0.3172 0.9920 0.16 0.00 0.00 0.84
#> Prog_313 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> Prog_295 4 0.3172 0.9920 0.16 0.00 0.00 0.84
#> Prog_315 4 0.3172 0.9920 0.16 0.00 0.00 0.84
#> Prog_321 4 0.3172 0.9920 0.16 0.00 0.00 0.84
#> Prog_333 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> LT-HSC_093 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> Prog_297 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> Prog_310 4 0.3172 0.9920 0.16 0.00 0.00 0.84
#> Prog_316 4 0.3172 0.9920 0.16 0.00 0.00 0.84
#> Prog_322 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> Prog_328 4 0.3172 0.9920 0.16 0.00 0.00 0.84
#> LT-HSC_094 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> Prog_305 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> Prog_311 3 0.2011 0.8996 0.00 0.00 0.92 0.08
#> Prog_323 4 0.3172 0.9920 0.16 0.00 0.00 0.84
#> Prog_329 4 0.3172 0.9920 0.16 0.00 0.00 0.84
#> Prog_335 1 0.0707 0.8994 0.98 0.00 0.00 0.02
#> HSPC_344 1 0.3172 0.8350 0.84 0.00 0.00 0.16
#> HSPC_356 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> HSPC_362 4 0.3172 0.9920 0.16 0.00 0.00 0.84
#> HSPC_368 1 0.3172 0.8350 0.84 0.00 0.00 0.16
#> HSPC_345 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> HSPC_351 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> HSPC_352 1 0.3172 0.8350 0.84 0.00 0.00 0.16
#> HSPC_358 1 0.3172 0.8350 0.84 0.00 0.00 0.16
#> HSPC_364 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_376 2 0.3853 0.8397 0.02 0.82 0.00 0.16
#> HSPC_377 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> LT-HSC_101 4 0.3172 0.9920 0.16 0.00 0.00 0.84
#> HSPC_360 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_372 2 0.3172 0.8576 0.00 0.84 0.00 0.16
#> Prog_349 4 0.3172 0.9920 0.16 0.00 0.00 0.84
#> Prog_355 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> Prog_362 4 0.0707 0.7786 0.00 0.02 0.00 0.98
#> Prog_345 4 0.3172 0.9920 0.16 0.00 0.00 0.84
#> Prog_369 4 0.3172 0.9920 0.16 0.00 0.00 0.84
#> LT-HSC_105 4 0.3172 0.9920 0.16 0.00 0.00 0.84
#> Prog_370 4 0.3172 0.9920 0.16 0.00 0.00 0.84
#> LT-HSC_106 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> Prog_354 1 0.3172 0.8350 0.84 0.00 0.00 0.16
#> HSPC_403 2 0.3172 0.8576 0.00 0.84 0.00 0.16
#> HSPC_421 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> HSPC_386 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_387 1 0.3172 0.8350 0.84 0.00 0.00 0.16
#> HSPC_393 1 0.1211 0.8819 0.96 0.00 0.00 0.04
#> HSPC_400 1 0.3172 0.8350 0.84 0.00 0.00 0.16
#> HSPC_406 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_424 1 0.3172 0.8350 0.84 0.00 0.00 0.16
#> HSPC_395 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> HSPC_413 2 0.3172 0.8576 0.00 0.84 0.00 0.16
#> HSPC_425 1 0.2011 0.8805 0.92 0.00 0.00 0.08
#> HSPC_390 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_426 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> Prog_422 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> Prog_411 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> Prog_417 4 0.3172 0.9920 0.16 0.00 0.00 0.84
#> Prog_423 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> Prog_390 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> Prog_402 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> Prog_384 4 0.3172 0.9920 0.16 0.00 0.00 0.84
#> HSPC_440 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_466 2 0.1637 0.9264 0.00 0.94 0.00 0.06
#> HSPC_461 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> Prog_440 3 0.1637 0.9171 0.00 0.06 0.94 0.00
#> Prog_458 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> Prog_435 4 0.3172 0.9920 0.16 0.00 0.00 0.84
#> Prog_465 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> Prog_454 1 0.1637 0.8615 0.94 0.00 0.00 0.06
#> Prog_460 1 0.6656 0.5559 0.62 0.22 0.00 0.16
#> Prog_466 4 0.3172 0.9920 0.16 0.00 0.00 0.84
#> Prog_462 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> Prog_468 4 0.3172 0.9920 0.16 0.00 0.00 0.84
#> LT-HSC_120 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> Prog_432 2 0.4522 0.5208 0.00 0.68 0.32 0.00
#> HSPC_505 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> LT-HSC_122 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_489 2 0.2647 0.8870 0.00 0.88 0.00 0.12
#> HSPC_495 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> HSPC_491 1 0.3172 0.8350 0.84 0.00 0.00 0.16
#> HSPC_509 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_486 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_510 1 0.3172 0.8350 0.84 0.00 0.00 0.16
#> Prog_469 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> Prog_494 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> Prog_483 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> Prog_507 4 0.3172 0.9920 0.16 0.00 0.00 0.84
#> Prog_490 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> Prog_472 2 0.4994 0.0452 0.00 0.52 0.48 0.00
#> Prog_497 4 0.3172 0.9920 0.16 0.00 0.00 0.84
#> Prog_503 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> Prog_510 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_537 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_543 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_520 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_532 1 0.3172 0.8350 0.84 0.00 0.00 0.16
#> HSPC_550 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_551 2 0.3172 0.8576 0.00 0.84 0.00 0.16
#> HSPC_528 1 0.2011 0.8805 0.92 0.00 0.00 0.08
#> HSPC_552 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> Prog_518 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> Prog_524 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> Prog_542 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> Prog_512 4 0.3172 0.9920 0.16 0.00 0.00 0.84
#> Prog_519 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> Prog_525 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> Prog_549 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> Prog_539 4 0.3172 0.9920 0.16 0.00 0.00 0.84
#> Prog_515 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> Prog_534 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> Prog_552 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> LT-HSC_144 2 0.3172 0.8576 0.00 0.84 0.00 0.16
#> HSPC_590 2 0.3172 0.8576 0.00 0.84 0.00 0.16
#> LT-HSC_148 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_569 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> Prog_553 3 0.1211 0.9398 0.00 0.04 0.96 0.00
#> Prog_578 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> Prog_561 2 0.3172 0.8576 0.00 0.84 0.00 0.16
#> Prog_586 3 0.4277 0.6274 0.00 0.28 0.72 0.00
#> Prog_570 4 0.3172 0.9920 0.16 0.00 0.00 0.84
#> HSPC_601 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_613 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_631 1 0.3172 0.8350 0.84 0.00 0.00 0.16
#> HSPC_614 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_596 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_627 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> LT-HSC_159 4 0.3172 0.9920 0.16 0.00 0.00 0.84
#> HSPC_597 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_628 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_634 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_598 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_623 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_629 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_635 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> Prog_625 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> Prog_620 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> Prog_615 4 0.3172 0.9920 0.16 0.00 0.00 0.84
#> Prog_633 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> Prog_634 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> LT-HSC_166 2 0.6656 0.5403 0.22 0.62 0.00 0.16
#> HSPC_643 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_661 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> LT-HSC_170 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_651 4 0.3172 0.9920 0.16 0.00 0.00 0.84
#> HSPC_663 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> LT-HSC_171 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_652 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_658 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> HSPC_665 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_654 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_660 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> HSPC_666 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> Prog_643 1 0.3610 0.6559 0.80 0.00 0.00 0.20
#> Prog_667 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> Prog_673 2 0.2345 0.9007 0.00 0.90 0.00 0.10
#> Prog_645 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> Prog_647 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> Prog_653 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> Prog_648 2 0.3172 0.8576 0.00 0.84 0.00 0.16
#> Prog_678 4 0.3172 0.9920 0.16 0.00 0.00 0.84
#> LT-HSC_180 3 0.1211 0.9398 0.00 0.04 0.96 0.00
#> HSPC_697 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> HSPC_717 1 0.3172 0.8350 0.84 0.00 0.00 0.16
#> HSPC_681 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_700 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> HSPC_701 2 0.3172 0.8576 0.00 0.84 0.00 0.16
#> HSPC_707 1 0.3172 0.8350 0.84 0.00 0.00 0.16
#> HSPC_683 1 0.3172 0.8350 0.84 0.00 0.00 0.16
#> HSPC_696 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> Prog_703 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> Prog_686 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> Prog_696 4 0.3172 0.9920 0.16 0.00 0.00 0.84
#> HSPC_735 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_760 2 0.3172 0.8576 0.00 0.84 0.00 0.16
#> HSPC_731 1 0.2011 0.8806 0.92 0.00 0.00 0.08
#> HSPC_744 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_762 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> Prog_739 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> Prog_757 4 0.3172 0.9920 0.16 0.00 0.00 0.84
#> Prog_746 4 0.3172 0.9920 0.16 0.00 0.00 0.84
#> Prog_748 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> Prog_749 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> Prog_761 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> Prog_732 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> Prog_750 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> Prog_756 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> HSPC_770 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_800 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> HSPC_789 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> LT-HSC_207 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_772 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_790 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_779 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_791 2 0.3610 0.7452 0.00 0.80 0.20 0.00
#> Prog_787 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> LT-HSC_211 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> Prog_796 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> Prog_803 3 0.0000 0.9796 0.00 0.00 1.00 0.00
#> LT-HSC_216 4 0.3172 0.9920 0.16 0.00 0.00 0.84
#> HSPC_841 3 0.0707 0.9594 0.02 0.00 0.98 0.00
#> HSPC_819 2 0.3172 0.8576 0.00 0.84 0.00 0.16
#> HSPC_837 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> HSPC_814 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> HSPC_821 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> HSPC_839 1 0.0000 0.9152 1.00 0.00 0.00 0.00
#> HSPC_816 2 0.2921 0.8727 0.00 0.86 0.00 0.14
#> HSPC_846 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> Prog_841 4 0.3172 0.9920 0.16 0.00 0.00 0.84
#> Prog_805 2 0.0000 0.9609 0.00 1.00 0.00 0.00
#> Prog_849 2 0.1211 0.9303 0.00 0.96 0.04 0.00
#> Prog_852 4 0.3172 0.9920 0.16 0.00 0.00 0.84
Heatmaps for the consensus matrix. It visualizes the probability of two samples to be in a same group.
consensus_heatmap(res, k = 2)
consensus_heatmap(res, k = 3)
consensus_heatmap(res, k = 4)
Heatmaps for the membership of samples in all partitions to see how consistent they are:
membership_heatmap(res, k = 2)
membership_heatmap(res, k = 3)
membership_heatmap(res, k = 4)
As soon as the classes for columns are determined, the signatures that are significantly different between subgroups can be looked for. Following are the heatmaps for signatures.
Signature heatmaps where rows are scaled:
Signature heatmaps where rows are not scaled:
get_signatures(res, k = 2, scale_rows = FALSE)
get_signatures(res, k = 3, scale_rows = FALSE)
get_signatures(res, k = 4, scale_rows = FALSE)
Compare the overlap of signatures from different k:
compare_signatures(res)
get_signature() returns a data frame invisibly. To get the list of signatures, the function
call should be assigned to a variable explicitly. In following code, if plot argument is set
to FALSE, no heatmap is plotted while only the differential analysis is performed.
# code only for demonstration
tb = get_signature(res, k = ..., plot = FALSE)
An example of the output of tb is:
#> which_row fdr mean_1 mean_2 scaled_mean_1 scaled_mean_2 km
#> 1 38 0.042760348 8.373488 9.131774 -0.5533452 0.5164555 1
#> 2 40 0.018707592 7.106213 8.469186 -0.6173731 0.5762149 1
#> 3 55 0.019134737 10.221463 11.207825 -0.6159697 0.5749050 1
#> 4 59 0.006059896 5.921854 7.869574 -0.6899429 0.6439467 1
#> 5 60 0.018055526 8.928898 10.211722 -0.6204761 0.5791110 1
#> 6 98 0.009384629 15.714769 14.887706 0.6635654 -0.6193277 2
...
The columns in tb are:
which_row: row indices corresponding to the input matrix.fdr: FDR for the differential test. mean_x: The mean value in group x.scaled_mean_x: The mean value in group x after rows are scaled.km: Row groups if k-means clustering is applied to rows (which is done by automatically selecting number of clusters).If there are too many signatures, top_signatures = ... can be set to only show the
signatures with the highest FDRs:
# code only for demonstration
# e.g. to show the top 500 most significant rows
tb = get_signature(res, k = ..., top_signatures = 500)
If the signatures are defined as these which are uniquely high in current group, diff_method argument
can be set to "uniquely_high_in_one_group":
# code only for demonstration
tb = get_signature(res, k = ..., diff_method = "uniquely_high_in_one_group")
UMAP plot which shows how samples are separated.
dimension_reduction(res, k = 2, method = "UMAP")
dimension_reduction(res, k = 3, method = "UMAP")
dimension_reduction(res, k = 4, method = "UMAP")
Following heatmap shows how subgroups are split when increasing k:
collect_classes(res)
If matrix rows can be associated to genes, consider to use functional_enrichment(res,
...) to perform function enrichment for the signature genes. See this vignette for more detailed explanations.
Parent node: Node04. Child nodes: Node0111 , Node0112 , Node0121 , Node0122 , Node0131 , Node0132-leaf , Node0141-leaf , Node0142-leaf , Node0211 , Node0212 , Node0213-leaf , Node0311-leaf , Node0312-leaf , Node0321-leaf , Node0322-leaf , Node0331-leaf , Node0332-leaf , Node0411-leaf , Node0412-leaf , Node0413-leaf , Node0421-leaf , Node0422-leaf , Node0423-leaf .
The object with results only for a single top-value method and a single partitioning method can be extracted as:
res = res_rh["041"]
A summary of res and all the functions that can be applied to it:
res
#> A 'ConsensusPartition' object with k = 2, 3, 4.
#> On a matrix with 16765 rows and 147 columns.
#> Top rows (1676) are extracted by 'ATC' method.
#> Subgroups are detected by 'skmeans' method.
#> Performed in total 150 partitions by row resampling.
#> Best k for subgroups seems to be 3.
#>
#> Following methods can be applied to this 'ConsensusPartition' object:
#> [1] "cola_report" "collect_classes" "collect_plots"
#> [4] "collect_stats" "colnames" "compare_partitions"
#> [7] "compare_signatures" "consensus_heatmap" "dimension_reduction"
#> [10] "functional_enrichment" "get_anno_col" "get_anno"
#> [13] "get_classes" "get_consensus" "get_matrix"
#> [16] "get_membership" "get_param" "get_signatures"
#> [19] "get_stats" "is_best_k" "is_stable_k"
#> [22] "membership_heatmap" "ncol" "nrow"
#> [25] "plot_ecdf" "predict_classes" "rownames"
#> [28] "select_partition_number" "show" "suggest_best_k"
#> [31] "test_to_known_factors" "top_rows_heatmap"
collect_plots() function collects all the plots made from res for all k (number of subgroups)
into one single page to provide an easy and fast comparison between different k.
collect_plots(res)
The plots are:
k and the heatmap of
predicted classes for each k.k.k.k.All the plots in panels can be made by individual functions and they are plotted later in this section.
select_partition_number() produces several plots showing different
statistics for choosing “optimized” k. There are following statistics:
k;k, the area increased is defined as \(A_k - A_{k-1}\).The detailed explanations of these statistics can be found in the cola vignette.
Generally speaking, higher 1-PAC score, higher mean silhouette score or higher
concordance corresponds to better partition. Rand index and Jaccard index
measure how similar the current partition is compared to partition with k-1.
If they are too similar, we won't accept k is better than k-1.
select_partition_number(res)
The numeric values for all these statistics can be obtained by get_stats().
get_stats(res)
#> k 1-PAC mean_silhouette concordance area_increased Rand Jaccard
#> 2 2 1.000 0.990 0.996 0.441 0.562 0.562
#> 3 3 0.990 0.956 0.982 0.515 0.750 0.562
#> 4 4 0.856 0.798 0.904 0.112 0.892 0.691
suggest_best_k() suggests the best \(k\) based on these statistics. The rules are as follows:
suggest_best_k(res)
#> [1] 3
#> attr(,"optional")
#> [1] 2
There is also optional best \(k\) = 2 that is worth to check.
Following is the table of the partitions (You need to click the show/hide
code output link to see it). The membership matrix (columns with name p*)
is inferred by
clue::cl_consensus()
function with the SE method. Basically the value in the membership matrix
represents the probability to belong to a certain group. The finall subgroup
label for an item is determined with the group with highest probability it
belongs to.
In get_classes() function, the entropy is calculated from the membership
matrix and the silhouette score is calculated from the consensus matrix.
cbind(get_classes(res, k = 2), get_membership(res, k = 2))
#> class entropy silhouette p1 p2
#> HSPC_026 2 0.000 0.994 0.00 1.00
#> HSPC_022 2 0.000 0.994 0.00 1.00
#> HSPC_006 2 0.000 0.994 0.00 1.00
#> Prog_025 1 0.000 0.998 1.00 0.00
#> Prog_010 2 0.000 0.994 0.00 1.00
#> Prog_016 1 0.000 0.998 1.00 0.00
#> Prog_022 1 0.000 0.998 1.00 0.00
#> LT-HSC_010 2 0.000 0.994 0.00 1.00
#> Prog_030 1 0.000 0.998 1.00 0.00
#> Prog_036 2 0.584 0.838 0.14 0.86
#> Prog_042 1 0.000 0.998 1.00 0.00
#> LT-HSC_012 1 0.000 0.998 1.00 0.00
#> HSPC_079 2 0.000 0.994 0.00 1.00
#> HSPC_062 2 0.000 0.994 0.00 1.00
#> HSPC_063 2 0.000 0.994 0.00 1.00
#> HSPC_064 2 0.000 0.994 0.00 1.00
#> HSPC_071 2 0.000 0.994 0.00 1.00
#> HSPC_072 2 0.000 0.994 0.00 1.00
#> Prog_074 1 0.000 0.998 1.00 0.00
#> LT-HSC_021 2 0.000 0.994 0.00 1.00
#> Prog_070 2 0.000 0.994 0.00 1.00
#> Prog_054 1 0.000 0.998 1.00 0.00
#> Prog_109 2 0.000 0.994 0.00 1.00
#> Prog_118 2 0.000 0.994 0.00 1.00
#> Prog_108 1 0.000 0.998 1.00 0.00
#> Prog_114 2 0.000 0.994 0.00 1.00
#> HSPC_127 2 0.000 0.994 0.00 1.00
#> HSPC_146 2 0.000 0.994 0.00 1.00
#> HSPC_168 2 0.000 0.994 0.00 1.00
#> Prog_159 2 0.000 0.994 0.00 1.00
#> LT-HSC_045 2 0.000 0.994 0.00 1.00
#> Prog_149 2 0.000 0.994 0.00 1.00
#> Prog_162 2 0.000 0.994 0.00 1.00
#> HSPC_190 2 0.000 0.994 0.00 1.00
#> HSPC_204 2 0.000 0.994 0.00 1.00
#> Prog_175 1 0.000 0.998 1.00 0.00
#> Prog_205 2 0.000 0.994 0.00 1.00
#> Prog_201 2 0.000 0.994 0.00 1.00
#> HSPC_243 2 0.000 0.994 0.00 1.00
#> HSPC_213 2 0.000 0.994 0.00 1.00
#> HSPC_250 2 0.000 0.994 0.00 1.00
#> HSPC_251 2 0.000 0.994 0.00 1.00
#> HSPC_215 2 0.000 0.994 0.00 1.00
#> Prog_230 2 0.000 0.994 0.00 1.00
#> Prog_214 2 0.000 0.994 0.00 1.00
#> HSPC_271 2 0.000 0.994 0.00 1.00
#> HSPC_253 2 0.000 0.994 0.00 1.00
#> HSPC_290 2 0.000 0.994 0.00 1.00
#> HSPC_280 2 0.000 0.994 0.00 1.00
#> HSPC_292 2 0.000 0.994 0.00 1.00
#> HSPC_263 2 0.000 0.994 0.00 1.00
#> HSPC_287 2 0.000 0.994 0.00 1.00
#> HSPC_293 2 0.000 0.994 0.00 1.00
#> HSPC_257 2 0.000 0.994 0.00 1.00
#> HSPC_294 2 0.000 0.994 0.00 1.00
#> Prog_289 2 0.000 0.994 0.00 1.00
#> Prog_291 1 0.000 0.998 1.00 0.00
#> HSPC_295 2 0.000 0.994 0.00 1.00
#> HSPC_305 2 0.000 0.994 0.00 1.00
#> HSPC_312 2 0.000 0.994 0.00 1.00
#> Prog_301 1 0.000 0.998 1.00 0.00
#> Prog_307 2 0.000 0.994 0.00 1.00
#> Prog_313 2 0.000 0.994 0.00 1.00
#> Prog_295 2 0.000 0.994 0.00 1.00
#> Prog_315 1 0.000 0.998 1.00 0.00
#> Prog_321 1 0.000 0.998 1.00 0.00
#> Prog_310 2 0.000 0.994 0.00 1.00
#> Prog_316 1 0.000 0.998 1.00 0.00
#> Prog_328 1 0.000 0.998 1.00 0.00
#> Prog_305 2 0.000 0.994 0.00 1.00
#> Prog_323 1 0.000 0.998 1.00 0.00
#> Prog_329 1 0.000 0.998 1.00 0.00
#> Prog_335 2 0.000 0.994 0.00 1.00
#> HSPC_344 2 0.000 0.994 0.00 1.00
#> HSPC_362 1 0.000 0.998 1.00 0.00
#> HSPC_352 2 0.000 0.994 0.00 1.00
#> HSPC_377 2 0.000 0.994 0.00 1.00
#> LT-HSC_101 1 0.000 0.998 1.00 0.00
#> Prog_349 1 0.000 0.998 1.00 0.00
#> Prog_355 2 0.000 0.994 0.00 1.00
#> Prog_362 1 0.000 0.998 1.00 0.00
#> Prog_345 1 0.000 0.998 1.00 0.00
#> Prog_369 1 0.000 0.998 1.00 0.00
#> LT-HSC_105 1 0.000 0.998 1.00 0.00
#> Prog_370 1 0.000 0.998 1.00 0.00
#> LT-HSC_106 2 0.000 0.994 0.00 1.00
#> Prog_354 2 0.000 0.994 0.00 1.00
#> HSPC_387 2 0.000 0.994 0.00 1.00
#> HSPC_393 1 0.000 0.998 1.00 0.00
#> HSPC_400 2 0.000 0.994 0.00 1.00
#> HSPC_424 2 0.000 0.994 0.00 1.00
#> HSPC_425 2 0.000 0.994 0.00 1.00
#> Prog_422 2 0.795 0.687 0.24 0.76
#> Prog_417 1 0.000 0.998 1.00 0.00
#> Prog_423 2 0.000 0.994 0.00 1.00
#> Prog_402 2 0.000 0.994 0.00 1.00
#> Prog_384 1 0.000 0.998 1.00 0.00
#> Prog_435 1 0.000 0.998 1.00 0.00
#> Prog_454 2 0.722 0.752 0.20 0.80
#> Prog_466 1 0.000 0.998 1.00 0.00
#> Prog_468 1 0.000 0.998 1.00 0.00
#> LT-HSC_120 2 0.000 0.994 0.00 1.00
#> HSPC_491 2 0.000 0.994 0.00 1.00
#> HSPC_510 2 0.000 0.994 0.00 1.00
#> Prog_507 1 0.000 0.998 1.00 0.00
#> Prog_497 1 0.000 0.998 1.00 0.00
#> HSPC_528 2 0.000 0.994 0.00 1.00
#> Prog_518 2 0.000 0.994 0.00 1.00
#> Prog_542 2 0.000 0.994 0.00 1.00
#> Prog_512 1 0.000 0.998 1.00 0.00
#> Prog_549 2 0.000 0.994 0.00 1.00
#> Prog_539 1 0.000 0.998 1.00 0.00
#> Prog_552 2 0.000 0.994 0.00 1.00
#> HSPC_569 2 0.000 0.994 0.00 1.00
#> Prog_578 2 0.000 0.994 0.00 1.00
#> Prog_570 1 0.000 0.998 1.00 0.00
#> HSPC_631 2 0.000 0.994 0.00 1.00
#> LT-HSC_159 1 0.000 0.998 1.00 0.00
#> Prog_625 2 0.000 0.994 0.00 1.00
#> Prog_615 1 0.000 0.998 1.00 0.00
#> HSPC_651 1 0.000 0.998 1.00 0.00
#> HSPC_663 2 0.000 0.994 0.00 1.00
#> HSPC_658 2 0.000 0.994 0.00 1.00
#> HSPC_666 2 0.000 0.994 0.00 1.00
#> Prog_643 2 0.000 0.994 0.00 1.00
#> Prog_678 1 0.000 0.998 1.00 0.00
#> HSPC_697 2 0.000 0.994 0.00 1.00
#> HSPC_717 2 0.000 0.994 0.00 1.00
#> HSPC_700 2 0.000 0.994 0.00 1.00
#> HSPC_683 2 0.000 0.994 0.00 1.00
#> Prog_686 2 0.000 0.994 0.00 1.00
#> Prog_696 1 0.000 0.998 1.00 0.00
#> HSPC_731 2 0.000 0.994 0.00 1.00
#> Prog_739 2 0.000 0.994 0.00 1.00
#> Prog_757 1 0.402 0.912 0.92 0.08
#> Prog_746 1 0.000 0.998 1.00 0.00
#> Prog_748 2 0.000 0.994 0.00 1.00
#> Prog_761 2 0.000 0.994 0.00 1.00
#> Prog_750 2 0.000 0.994 0.00 1.00
#> HSPC_800 2 0.000 0.994 0.00 1.00
#> Prog_796 2 0.000 0.994 0.00 1.00
#> LT-HSC_216 1 0.000 0.998 1.00 0.00
#> HSPC_837 2 0.000 0.994 0.00 1.00
#> HSPC_814 2 0.000 0.994 0.00 1.00
#> HSPC_839 2 0.000 0.994 0.00 1.00
#> Prog_841 1 0.000 0.998 1.00 0.00
#> Prog_852 1 0.000 0.998 1.00 0.00
cbind(get_classes(res, k = 3), get_membership(res, k = 3))
#> class entropy silhouette p1 p2 p3
#> HSPC_026 2 0.0000 0.982 0.00 1.00 0.00
#> HSPC_022 2 0.0000 0.982 0.00 1.00 0.00
#> HSPC_006 2 0.0000 0.982 0.00 1.00 0.00
#> Prog_025 1 0.0000 0.995 1.00 0.00 0.00
#> Prog_010 2 0.0000 0.982 0.00 1.00 0.00
#> Prog_016 1 0.0000 0.995 1.00 0.00 0.00
#> Prog_022 1 0.0000 0.995 1.00 0.00 0.00
#> LT-HSC_010 2 0.0000 0.982 0.00 1.00 0.00
#> Prog_030 1 0.0000 0.995 1.00 0.00 0.00
#> Prog_036 2 0.0000 0.982 0.00 1.00 0.00
#> Prog_042 1 0.0000 0.995 1.00 0.00 0.00
#> LT-HSC_012 1 0.0000 0.995 1.00 0.00 0.00
#> HSPC_079 2 0.0000 0.982 0.00 1.00 0.00
#> HSPC_062 3 0.0000 0.967 0.00 0.00 1.00
#> HSPC_063 2 0.0000 0.982 0.00 1.00 0.00
#> HSPC_064 3 0.0000 0.967 0.00 0.00 1.00
#> HSPC_071 3 0.0000 0.967 0.00 0.00 1.00
#> HSPC_072 3 0.0000 0.967 0.00 0.00 1.00
#> Prog_074 1 0.0000 0.995 1.00 0.00 0.00
#> LT-HSC_021 3 0.4291 0.776 0.00 0.18 0.82
#> Prog_070 2 0.0000 0.982 0.00 1.00 0.00
#> Prog_054 1 0.0000 0.995 1.00 0.00 0.00
#> Prog_109 2 0.0000 0.982 0.00 1.00 0.00
#> Prog_118 2 0.0000 0.982 0.00 1.00 0.00
#> Prog_108 1 0.0000 0.995 1.00 0.00 0.00
#> Prog_114 3 0.0000 0.967 0.00 0.00 1.00
#> HSPC_127 2 0.0000 0.982 0.00 1.00 0.00
#> HSPC_146 2 0.0000 0.982 0.00 1.00 0.00
#> HSPC_168 3 0.5560 0.581 0.00 0.30 0.70
#> Prog_159 2 0.0000 0.982 0.00 1.00 0.00
#> LT-HSC_045 2 0.0000 0.982 0.00 1.00 0.00
#> Prog_149 3 0.0000 0.967 0.00 0.00 1.00
#> Prog_162 2 0.0000 0.982 0.00 1.00 0.00
#> HSPC_190 3 0.0000 0.967 0.00 0.00 1.00
#> HSPC_204 2 0.0000 0.982 0.00 1.00 0.00
#> Prog_175 1 0.0000 0.995 1.00 0.00 0.00
#> Prog_205 3 0.0000 0.967 0.00 0.00 1.00
#> Prog_201 2 0.0000 0.982 0.00 1.00 0.00
#> HSPC_243 2 0.0000 0.982 0.00 1.00 0.00
#> HSPC_213 3 0.0000 0.967 0.00 0.00 1.00
#> HSPC_250 3 0.5216 0.657 0.00 0.26 0.74
#> HSPC_251 3 0.0000 0.967 0.00 0.00 1.00
#> HSPC_215 2 0.0000 0.982 0.00 1.00 0.00
#> Prog_230 3 0.0000 0.967 0.00 0.00 1.00
#> Prog_214 3 0.0000 0.967 0.00 0.00 1.00
#> HSPC_271 2 0.0000 0.982 0.00 1.00 0.00
#> HSPC_253 3 0.0000 0.967 0.00 0.00 1.00
#> HSPC_290 3 0.0000 0.967 0.00 0.00 1.00
#> HSPC_280 2 0.0000 0.982 0.00 1.00 0.00
#> HSPC_292 2 0.0000 0.982 0.00 1.00 0.00
#> HSPC_263 2 0.0000 0.982 0.00 1.00 0.00
#> HSPC_287 3 0.0000 0.967 0.00 0.00 1.00
#> HSPC_293 2 0.0000 0.982 0.00 1.00 0.00
#> HSPC_257 3 0.0000 0.967 0.00 0.00 1.00
#> HSPC_294 3 0.0000 0.967 0.00 0.00 1.00
#> Prog_289 2 0.0000 0.982 0.00 1.00 0.00
#> Prog_291 1 0.0000 0.995 1.00 0.00 0.00
#> HSPC_295 3 0.0000 0.967 0.00 0.00 1.00
#> HSPC_305 2 0.0000 0.982 0.00 1.00 0.00
#> HSPC_312 3 0.0000 0.967 0.00 0.00 1.00
#> Prog_301 1 0.0000 0.995 1.00 0.00 0.00
#> Prog_307 2 0.0892 0.963 0.00 0.98 0.02
#> Prog_313 3 0.0000 0.967 0.00 0.00 1.00
#> Prog_295 2 0.0000 0.982 0.00 1.00 0.00
#> Prog_315 1 0.0000 0.995 1.00 0.00 0.00
#> Prog_321 1 0.0000 0.995 1.00 0.00 0.00
#> Prog_310 2 0.0000 0.982 0.00 1.00 0.00
#> Prog_316 1 0.0000 0.995 1.00 0.00 0.00
#> Prog_328 1 0.4291 0.780 0.82 0.18 0.00
#> Prog_305 3 0.0000 0.967 0.00 0.00 1.00
#> Prog_323 1 0.0000 0.995 1.00 0.00 0.00
#> Prog_329 1 0.0000 0.995 1.00 0.00 0.00
#> Prog_335 3 0.0000 0.967 0.00 0.00 1.00
#> HSPC_344 2 0.0000 0.982 0.00 1.00 0.00
#> HSPC_362 1 0.0000 0.995 1.00 0.00 0.00
#> HSPC_352 2 0.0000 0.982 0.00 1.00 0.00
#> HSPC_377 3 0.0000 0.967 0.00 0.00 1.00
#> LT-HSC_101 1 0.0000 0.995 1.00 0.00 0.00
#> Prog_349 1 0.0000 0.995 1.00 0.00 0.00
#> Prog_355 3 0.0000 0.967 0.00 0.00 1.00
#> Prog_362 2 0.0000 0.982 0.00 1.00 0.00
#> Prog_345 1 0.0000 0.995 1.00 0.00 0.00
#> Prog_369 1 0.0000 0.995 1.00 0.00 0.00
#> LT-HSC_105 1 0.0000 0.995 1.00 0.00 0.00
#> Prog_370 1 0.0000 0.995 1.00 0.00 0.00
#> LT-HSC_106 2 0.0000 0.982 0.00 1.00 0.00
#> Prog_354 2 0.0000 0.982 0.00 1.00 0.00
#> HSPC_387 2 0.0000 0.982 0.00 1.00 0.00
#> HSPC_393 1 0.0000 0.995 1.00 0.00 0.00
#> HSPC_400 2 0.0000 0.982 0.00 1.00 0.00
#> HSPC_424 3 0.6280 0.149 0.00 0.46 0.54
#> HSPC_425 3 0.0000 0.967 0.00 0.00 1.00
#> Prog_422 3 0.0000 0.967 0.00 0.00 1.00
#> Prog_417 1 0.0000 0.995 1.00 0.00 0.00
#> Prog_423 2 0.6192 0.255 0.00 0.58 0.42
#> Prog_402 2 0.0000 0.982 0.00 1.00 0.00
#> Prog_384 1 0.0000 0.995 1.00 0.00 0.00
#> Prog_435 1 0.1529 0.954 0.96 0.04 0.00
#> Prog_454 2 0.0000 0.982 0.00 1.00 0.00
#> Prog_466 1 0.0000 0.995 1.00 0.00 0.00
#> Prog_468 1 0.0000 0.995 1.00 0.00 0.00
#> LT-HSC_120 3 0.0000 0.967 0.00 0.00 1.00
#> HSPC_491 2 0.0000 0.982 0.00 1.00 0.00
#> HSPC_510 2 0.0000 0.982 0.00 1.00 0.00
#> Prog_507 1 0.0000 0.995 1.00 0.00 0.00
#> Prog_497 1 0.0000 0.995 1.00 0.00 0.00
#> HSPC_528 3 0.0000 0.967 0.00 0.00 1.00
#> Prog_518 3 0.0000 0.967 0.00 0.00 1.00
#> Prog_542 3 0.0000 0.967 0.00 0.00 1.00
#> Prog_512 1 0.0000 0.995 1.00 0.00 0.00
#> Prog_549 3 0.0000 0.967 0.00 0.00 1.00
#> Prog_539 1 0.0000 0.995 1.00 0.00 0.00
#> Prog_552 2 0.2537 0.902 0.00 0.92 0.08
#> HSPC_569 3 0.0000 0.967 0.00 0.00 1.00
#> Prog_578 3 0.0000 0.967 0.00 0.00 1.00
#> Prog_570 1 0.0000 0.995 1.00 0.00 0.00
#> HSPC_631 2 0.0000 0.982 0.00 1.00 0.00
#> LT-HSC_159 1 0.0000 0.995 1.00 0.00 0.00
#> Prog_625 3 0.0000 0.967 0.00 0.00 1.00
#> Prog_615 1 0.0000 0.995 1.00 0.00 0.00
#> HSPC_651 1 0.0000 0.995 1.00 0.00 0.00
#> HSPC_663 2 0.0000 0.982 0.00 1.00 0.00
#> HSPC_658 2 0.0000 0.982 0.00 1.00 0.00
#> HSPC_666 3 0.0000 0.967 0.00 0.00 1.00
#> Prog_643 2 0.0000 0.982 0.00 1.00 0.00
#> Prog_678 1 0.0000 0.995 1.00 0.00 0.00
#> HSPC_697 3 0.0000 0.967 0.00 0.00 1.00
#> HSPC_717 2 0.0000 0.982 0.00 1.00 0.00
#> HSPC_700 3 0.0000 0.967 0.00 0.00 1.00
#> HSPC_683 2 0.0000 0.982 0.00 1.00 0.00
#> Prog_686 3 0.0000 0.967 0.00 0.00 1.00
#> Prog_696 1 0.0000 0.995 1.00 0.00 0.00
#> HSPC_731 2 0.0000 0.982 0.00 1.00 0.00
#> Prog_739 2 0.0000 0.982 0.00 1.00 0.00
#> Prog_757 2 0.0000 0.982 0.00 1.00 0.00
#> Prog_746 1 0.0000 0.995 1.00 0.00 0.00
#> Prog_748 3 0.0000 0.967 0.00 0.00 1.00
#> Prog_761 2 0.5560 0.551 0.00 0.70 0.30
#> Prog_750 3 0.0000 0.967 0.00 0.00 1.00
#> HSPC_800 3 0.0000 0.967 0.00 0.00 1.00
#> Prog_796 2 0.0000 0.982 0.00 1.00 0.00
#> LT-HSC_216 1 0.0000 0.995 1.00 0.00 0.00
#> HSPC_837 2 0.3340 0.852 0.00 0.88 0.12
#> HSPC_814 3 0.5216 0.655 0.00 0.26 0.74
#> HSPC_839 3 0.0000 0.967 0.00 0.00 1.00
#> Prog_841 1 0.0000 0.995 1.00 0.00 0.00
#> Prog_852 1 0.0000 0.995 1.00 0.00 0.00
cbind(get_classes(res, k = 4), get_membership(res, k = 4))
#> class entropy silhouette p1 p2 p3 p4
#> HSPC_026 2 0.0000 0.8725 0.00 1.00 0.00 0.00
#> HSPC_022 2 0.0000 0.8725 0.00 1.00 0.00 0.00
#> HSPC_006 2 0.3975 0.7045 0.00 0.76 0.00 0.24
#> Prog_025 1 0.0000 0.9719 1.00 0.00 0.00 0.00
#> Prog_010 2 0.0000 0.8725 0.00 1.00 0.00 0.00
#> Prog_016 1 0.0000 0.9719 1.00 0.00 0.00 0.00
#> Prog_022 1 0.0000 0.9719 1.00 0.00 0.00 0.00
#> LT-HSC_010 2 0.4522 0.6224 0.00 0.68 0.00 0.32
#> Prog_030 1 0.2011 0.9120 0.92 0.00 0.00 0.08
#> Prog_036 2 0.4994 0.4271 0.00 0.52 0.00 0.48
#> Prog_042 1 0.0000 0.9719 1.00 0.00 0.00 0.00
#> LT-HSC_012 1 0.0707 0.9613 0.98 0.00 0.00 0.02
#> HSPC_079 2 0.0000 0.8725 0.00 1.00 0.00 0.00
#> HSPC_062 3 0.4855 0.4338 0.00 0.40 0.60 0.00
#> HSPC_063 4 0.1211 0.7783 0.00 0.04 0.00 0.96
#> HSPC_064 3 0.0707 0.8455 0.00 0.02 0.98 0.00
#> HSPC_071 3 0.0000 0.8580 0.00 0.00 1.00 0.00
#> HSPC_072 4 0.4907 0.5271 0.00 0.00 0.42 0.58
#> Prog_074 1 0.1211 0.9478 0.96 0.00 0.00 0.04
#> LT-HSC_021 2 0.4855 0.1591 0.00 0.60 0.40 0.00
#> Prog_070 2 0.0000 0.8725 0.00 1.00 0.00 0.00
#> Prog_054 1 0.0000 0.9719 1.00 0.00 0.00 0.00
#> Prog_109 4 0.1211 0.7783 0.00 0.04 0.00 0.96
#> Prog_118 4 0.1211 0.7783 0.00 0.04 0.00 0.96
#> Prog_108 1 0.0000 0.9719 1.00 0.00 0.00 0.00
#> Prog_114 4 0.4948 0.4869 0.00 0.00 0.44 0.56
#> HSPC_127 2 0.0000 0.8725 0.00 1.00 0.00 0.00
#> HSPC_146 2 0.0000 0.8725 0.00 1.00 0.00 0.00
#> HSPC_168 3 0.5487 0.2190 0.00 0.02 0.58 0.40
#> Prog_159 2 0.4948 0.4482 0.00 0.56 0.00 0.44
#> LT-HSC_045 2 0.4907 0.4891 0.00 0.58 0.00 0.42
#> Prog_149 3 0.0000 0.8580 0.00 0.00 1.00 0.00
#> Prog_162 4 0.1211 0.7783 0.00 0.04 0.00 0.96
#> HSPC_190 4 0.4907 0.5271 0.00 0.00 0.42 0.58
#> HSPC_204 2 0.0000 0.8725 0.00 1.00 0.00 0.00
#> Prog_175 1 0.0000 0.9719 1.00 0.00 0.00 0.00
#> Prog_205 4 0.4907 0.5271 0.00 0.00 0.42 0.58
#> Prog_201 2 0.4790 0.5493 0.00 0.62 0.00 0.38
#> HSPC_243 2 0.0000 0.8725 0.00 1.00 0.00 0.00
#> HSPC_213 3 0.4522 0.5690 0.00 0.32 0.68 0.00
#> HSPC_250 3 0.4977 0.2919 0.00 0.46 0.54 0.00
#> HSPC_251 3 0.0000 0.8580 0.00 0.00 1.00 0.00
#> HSPC_215 4 0.1211 0.7783 0.00 0.04 0.00 0.96
#> Prog_230 4 0.2345 0.7463 0.00 0.00 0.10 0.90
#> Prog_214 4 0.4907 0.5271 0.00 0.00 0.42 0.58
#> HSPC_271 2 0.0000 0.8725 0.00 1.00 0.00 0.00
#> HSPC_253 3 0.0707 0.8455 0.00 0.02 0.98 0.00
#> HSPC_290 3 0.0000 0.8580 0.00 0.00 1.00 0.00
#> HSPC_280 2 0.0000 0.8725 0.00 1.00 0.00 0.00
#> HSPC_292 2 0.0000 0.8725 0.00 1.00 0.00 0.00
#> HSPC_263 2 0.4855 0.5201 0.00 0.60 0.00 0.40
#> HSPC_287 3 0.0000 0.8580 0.00 0.00 1.00 0.00
#> HSPC_293 2 0.0000 0.8725 0.00 1.00 0.00 0.00
#> HSPC_257 3 0.4134 0.6319 0.00 0.26 0.74 0.00
#> HSPC_294 3 0.0000 0.8580 0.00 0.00 1.00 0.00
#> Prog_289 4 0.1211 0.7783 0.00 0.04 0.00 0.96
#> Prog_291 1 0.0000 0.9719 1.00 0.00 0.00 0.00
#> HSPC_295 3 0.0000 0.8580 0.00 0.00 1.00 0.00
#> HSPC_305 2 0.0000 0.8725 0.00 1.00 0.00 0.00
#> HSPC_312 3 0.0000 0.8580 0.00 0.00 1.00 0.00
#> Prog_301 1 0.0000 0.9719 1.00 0.00 0.00 0.00
#> Prog_307 4 0.1211 0.7783 0.00 0.04 0.00 0.96
#> Prog_313 4 0.4907 0.5271 0.00 0.00 0.42 0.58
#> Prog_295 4 0.1211 0.7783 0.00 0.04 0.00 0.96
#> Prog_315 1 0.0000 0.9719 1.00 0.00 0.00 0.00
#> Prog_321 1 0.0000 0.9719 1.00 0.00 0.00 0.00
#> Prog_310 2 0.4994 0.3568 0.00 0.52 0.00 0.48
#> Prog_316 1 0.0000 0.9719 1.00 0.00 0.00 0.00
#> Prog_328 1 0.6299 0.1428 0.52 0.42 0.00 0.06
#> Prog_305 3 0.0000 0.8580 0.00 0.00 1.00 0.00
#> Prog_323 1 0.0000 0.9719 1.00 0.00 0.00 0.00
#> Prog_329 1 0.0000 0.9719 1.00 0.00 0.00 0.00
#> Prog_335 4 0.4907 0.5271 0.00 0.00 0.42 0.58
#> HSPC_344 2 0.1211 0.8486 0.00 0.96 0.00 0.04
#> HSPC_362 1 0.0000 0.9719 1.00 0.00 0.00 0.00
#> HSPC_352 2 0.0000 0.8725 0.00 1.00 0.00 0.00
#> HSPC_377 3 0.0000 0.8580 0.00 0.00 1.00 0.00
#> LT-HSC_101 1 0.0000 0.9719 1.00 0.00 0.00 0.00
#> Prog_349 1 0.0000 0.9719 1.00 0.00 0.00 0.00
#> Prog_355 3 0.0000 0.8580 0.00 0.00 1.00 0.00
#> Prog_362 2 0.3172 0.7933 0.00 0.84 0.00 0.16
#> Prog_345 1 0.0707 0.9613 0.98 0.00 0.00 0.02
#> Prog_369 1 0.0000 0.9719 1.00 0.00 0.00 0.00
#> LT-HSC_105 1 0.0000 0.9719 1.00 0.00 0.00 0.00
#> Prog_370 1 0.1211 0.9478 0.96 0.00 0.00 0.04
#> LT-HSC_106 2 0.0000 0.8725 0.00 1.00 0.00 0.00
#> Prog_354 2 0.1211 0.8486 0.00 0.96 0.00 0.04
#> HSPC_387 2 0.0000 0.8725 0.00 1.00 0.00 0.00
#> HSPC_393 1 0.1211 0.9478 0.96 0.00 0.00 0.04
#> HSPC_400 2 0.2921 0.7900 0.00 0.86 0.00 0.14
#> HSPC_424 2 0.0707 0.8567 0.00 0.98 0.02 0.00
#> HSPC_425 3 0.0000 0.8580 0.00 0.00 1.00 0.00
#> Prog_422 3 0.0000 0.8580 0.00 0.00 1.00 0.00
#> Prog_417 1 0.0000 0.9719 1.00 0.00 0.00 0.00
#> Prog_423 2 0.1913 0.8394 0.00 0.94 0.02 0.04
#> Prog_402 4 0.1211 0.7783 0.00 0.04 0.00 0.96
#> Prog_384 1 0.0000 0.9719 1.00 0.00 0.00 0.00
#> Prog_435 1 0.4948 0.3200 0.56 0.00 0.00 0.44
#> Prog_454 2 0.2921 0.8067 0.00 0.86 0.00 0.14
#> Prog_466 1 0.0000 0.9719 1.00 0.00 0.00 0.00
#> Prog_468 1 0.0000 0.9719 1.00 0.00 0.00 0.00
#> LT-HSC_120 3 0.0000 0.8580 0.00 0.00 1.00 0.00
#> HSPC_491 2 0.0000 0.8725 0.00 1.00 0.00 0.00
#> HSPC_510 2 0.0000 0.8725 0.00 1.00 0.00 0.00
#> Prog_507 1 0.0000 0.9719 1.00 0.00 0.00 0.00
#> Prog_497 1 0.0707 0.9613 0.98 0.00 0.00 0.02
#> HSPC_528 3 0.0000 0.8580 0.00 0.00 1.00 0.00
#> Prog_518 3 0.0000 0.8580 0.00 0.00 1.00 0.00
#> Prog_542 3 0.4855 -0.0463 0.00 0.00 0.60 0.40
#> Prog_512 1 0.0707 0.9613 0.98 0.00 0.00 0.02
#> Prog_549 3 0.0000 0.8580 0.00 0.00 1.00 0.00
#> Prog_539 1 0.0707 0.9613 0.98 0.00 0.00 0.02
#> Prog_552 4 0.1211 0.7783 0.00 0.04 0.00 0.96
#> HSPC_569 3 0.0000 0.8580 0.00 0.00 1.00 0.00
#> Prog_578 3 0.2011 0.7679 0.00 0.00 0.92 0.08
#> Prog_570 1 0.0000 0.9719 1.00 0.00 0.00 0.00
#> HSPC_631 2 0.0000 0.8725 0.00 1.00 0.00 0.00
#> LT-HSC_159 1 0.0000 0.9719 1.00 0.00 0.00 0.00
#> Prog_625 4 0.4277 0.6461 0.00 0.00 0.28 0.72
#> Prog_615 1 0.0000 0.9719 1.00 0.00 0.00 0.00
#> HSPC_651 1 0.0000 0.9719 1.00 0.00 0.00 0.00
#> HSPC_663 2 0.0000 0.8725 0.00 1.00 0.00 0.00
#> HSPC_658 2 0.0000 0.8725 0.00 1.00 0.00 0.00
#> HSPC_666 3 0.1211 0.8308 0.00 0.04 0.96 0.00
#> Prog_643 2 0.4855 0.5201 0.00 0.60 0.00 0.40
#> Prog_678 1 0.0000 0.9719 1.00 0.00 0.00 0.00
#> HSPC_697 3 0.0000 0.8580 0.00 0.00 1.00 0.00
#> HSPC_717 2 0.0000 0.8725 0.00 1.00 0.00 0.00
#> HSPC_700 3 0.0000 0.8580 0.00 0.00 1.00 0.00
#> HSPC_683 2 0.0000 0.8725 0.00 1.00 0.00 0.00
#> Prog_686 4 0.4948 0.4869 0.00 0.00 0.44 0.56
#> Prog_696 1 0.0000 0.9719 1.00 0.00 0.00 0.00
#> HSPC_731 2 0.0000 0.8725 0.00 1.00 0.00 0.00
#> Prog_739 4 0.1211 0.7783 0.00 0.04 0.00 0.96
#> Prog_757 2 0.4948 0.4982 0.00 0.56 0.00 0.44
#> Prog_746 1 0.0000 0.9719 1.00 0.00 0.00 0.00
#> Prog_748 3 0.3975 0.6519 0.00 0.24 0.76 0.00
#> Prog_761 4 0.1211 0.7783 0.00 0.04 0.00 0.96
#> Prog_750 3 0.0000 0.8580 0.00 0.00 1.00 0.00
#> HSPC_800 3 0.4406 0.5915 0.00 0.30 0.70 0.00
#> Prog_796 2 0.3975 0.7083 0.00 0.76 0.00 0.24
#> LT-HSC_216 1 0.0000 0.9719 1.00 0.00 0.00 0.00
#> HSPC_837 2 0.0000 0.8725 0.00 1.00 0.00 0.00
#> HSPC_814 3 0.4855 0.4334 0.00 0.40 0.60 0.00
#> HSPC_839 3 0.0000 0.8580 0.00 0.00 1.00 0.00
#> Prog_841 1 0.0000 0.9719 1.00 0.00 0.00 0.00
#> Prog_852 1 0.0000 0.9719 1.00 0.00 0.00 0.00
Heatmaps for the consensus matrix. It visualizes the probability of two samples to be in a same group.
consensus_heatmap(res, k = 2)
consensus_heatmap(res, k = 3)
consensus_heatmap(res, k = 4)
Heatmaps for the membership of samples in all partitions to see how consistent they are:
membership_heatmap(res, k = 2)
membership_heatmap(res, k = 3)
membership_heatmap(res, k = 4)
As soon as the classes for columns are determined, the signatures that are significantly different between subgroups can be looked for. Following are the heatmaps for signatures.
Signature heatmaps where rows are scaled:
Signature heatmaps where rows are not scaled:
get_signatures(res, k = 2, scale_rows = FALSE)
get_signatures(res, k = 3, scale_rows = FALSE)
get_signatures(res, k = 4, scale_rows = FALSE)
Compare the overlap of signatures from different k:
compare_signatures(res)
get_signature() returns a data frame invisibly. To get the list of signatures, the function
call should be assigned to a variable explicitly. In following code, if plot argument is set
to FALSE, no heatmap is plotted while only the differential analysis is performed.
# code only for demonstration
tb = get_signature(res, k = ..., plot = FALSE)
An example of the output of tb is:
#> which_row fdr mean_1 mean_2 scaled_mean_1 scaled_mean_2 km
#> 1 38 0.042760348 8.373488 9.131774 -0.5533452 0.5164555 1
#> 2 40 0.018707592 7.106213 8.469186 -0.6173731 0.5762149 1
#> 3 55 0.019134737 10.221463 11.207825 -0.6159697 0.5749050 1
#> 4 59 0.006059896 5.921854 7.869574 -0.6899429 0.6439467 1
#> 5 60 0.018055526 8.928898 10.211722 -0.6204761 0.5791110 1
#> 6 98 0.009384629 15.714769 14.887706 0.6635654 -0.6193277 2
...
The columns in tb are:
which_row: row indices corresponding to the input matrix.fdr: FDR for the differential test. mean_x: The mean value in group x.scaled_mean_x: The mean value in group x after rows are scaled.km: Row groups if k-means clustering is applied to rows (which is done by automatically selecting number of clusters).If there are too many signatures, top_signatures = ... can be set to only show the
signatures with the highest FDRs:
# code only for demonstration
# e.g. to show the top 500 most significant rows
tb = get_signature(res, k = ..., top_signatures = 500)
If the signatures are defined as these which are uniquely high in current group, diff_method argument
can be set to "uniquely_high_in_one_group":
# code only for demonstration
tb = get_signature(res, k = ..., diff_method = "uniquely_high_in_one_group")
UMAP plot which shows how samples are separated.
dimension_reduction(res, k = 2, method = "UMAP")
dimension_reduction(res, k = 3, method = "UMAP")
dimension_reduction(res, k = 4, method = "UMAP")
Following heatmap shows how subgroups are split when increasing k:
collect_classes(res)
If matrix rows can be associated to genes, consider to use functional_enrichment(res,
...) to perform function enrichment for the signature genes. See this vignette for more detailed explanations.
Parent node: Node04. Child nodes: Node0111 , Node0112 , Node0121 , Node0122 , Node0131 , Node0132-leaf , Node0141-leaf , Node0142-leaf , Node0211 , Node0212 , Node0213-leaf , Node0311-leaf , Node0312-leaf , Node0321-leaf , Node0322-leaf , Node0331-leaf , Node0332-leaf , Node0411-leaf , Node0412-leaf , Node0413-leaf , Node0421-leaf , Node0422-leaf , Node0423-leaf .
The object with results only for a single top-value method and a single partitioning method can be extracted as:
res = res_rh["042"]
A summary of res and all the functions that can be applied to it:
res
#> A 'ConsensusPartition' object with k = 2, 3, 4.
#> On a matrix with 16911 rows and 141 columns.
#> Top rows (1476) are extracted by 'ATC' method.
#> Subgroups are detected by 'skmeans' method.
#> Performed in total 150 partitions by row resampling.
#> Best k for subgroups seems to be 3.
#>
#> Following methods can be applied to this 'ConsensusPartition' object:
#> [1] "cola_report" "collect_classes" "collect_plots"
#> [4] "collect_stats" "colnames" "compare_partitions"
#> [7] "compare_signatures" "consensus_heatmap" "dimension_reduction"
#> [10] "functional_enrichment" "get_anno_col" "get_anno"
#> [13] "get_classes" "get_consensus" "get_matrix"
#> [16] "get_membership" "get_param" "get_signatures"
#> [19] "get_stats" "is_best_k" "is_stable_k"
#> [22] "membership_heatmap" "ncol" "nrow"
#> [25] "plot_ecdf" "predict_classes" "rownames"
#> [28] "select_partition_number" "show" "suggest_best_k"
#> [31] "test_to_known_factors" "top_rows_heatmap"
collect_plots() function collects all the plots made from res for all k (number of subgroups)
into one single page to provide an easy and fast comparison between different k.
collect_plots(res)
The plots are:
k and the heatmap of
predicted classes for each k.k.k.k.All the plots in panels can be made by individual functions and they are plotted later in this section.
select_partition_number() produces several plots showing different
statistics for choosing “optimized” k. There are following statistics:
k;k, the area increased is defined as \(A_k - A_{k-1}\).The detailed explanations of these statistics can be found in the cola vignette.
Generally speaking, higher 1-PAC score, higher mean silhouette score or higher
concordance corresponds to better partition. Rand index and Jaccard index
measure how similar the current partition is compared to partition with k-1.
If they are too similar, we won't accept k is better than k-1.
select_partition_number(res)
The numeric values for all these statistics can be obtained by get_stats().
get_stats(res)
#> k 1-PAC mean_silhouette concordance area_increased Rand Jaccard
#> 2 2 0.941 0.931 0.971 0.501 0.501 0.501
#> 3 3 0.996 0.968 0.986 0.337 0.736 0.519
#> 4 4 0.675 0.630 0.823 0.114 0.887 0.680
suggest_best_k() suggests the best \(k\) based on these statistics. The rules are as follows:
suggest_best_k(res)
#> [1] 3
#> attr(,"optional")
#> [1] 2
There is also optional best \(k\) = 2 that is worth to check.
Following is the table of the partitions (You need to click the show/hide
code output link to see it). The membership matrix (columns with name p*)
is inferred by
clue::cl_consensus()
function with the SE method. Basically the value in the membership matrix
represents the probability to belong to a certain group. The finall subgroup
label for an item is determined with the group with highest probability it
belongs to.
In get_classes() function, the entropy is calculated from the membership
matrix and the silhouette score is calculated from the consensus matrix.
cbind(get_classes(res, k = 2), get_membership(res, k = 2))
#> class entropy silhouette p1 p2
#> HSPC_025 1 1.000 -0.0641 0.50 0.50
#> HSPC_037 2 0.000 0.9629 0.00 1.00
#> HSPC_008 2 0.000 0.9629 0.00 1.00
#> HSPC_020 2 0.722 0.7610 0.20 0.80
#> LT-HSC_002 2 0.242 0.9398 0.04 0.96
#> HSPC_011 1 0.141 0.9631 0.98 0.02
#> HSPC_023 2 0.242 0.9398 0.04 0.96
#> HSPC_041 1 0.141 0.9631 0.98 0.02
#> HSPC_012 2 0.000 0.9629 0.00 1.00
#> HSPC_018 1 0.000 0.9767 1.00 0.00
#> LT-HSC_007 2 0.000 0.9629 0.00 1.00
#> Prog_040 1 0.000 0.9767 1.00 0.00
#> HSPC_055 2 0.000 0.9629 0.00 1.00
#> HSPC_061 2 0.000 0.9629 0.00 1.00
#> HSPC_067 1 0.000 0.9767 1.00 0.00
#> HSPC_043 1 0.000 0.9767 1.00 0.00
#> HSPC_045 1 0.000 0.9767 1.00 0.00
#> HSPC_082 1 0.000 0.9767 1.00 0.00
#> HSPC_084 1 0.141 0.9631 0.98 0.02
#> Prog_062 2 0.000 0.9629 0.00 1.00
#> HSPC_085 1 0.000 0.9767 1.00 0.00
#> HSPC_099 2 0.000 0.9629 0.00 1.00
#> HSPC_117 2 0.000 0.9629 0.00 1.00
#> HSPC_107 2 0.402 0.9050 0.08 0.92
#> HSPC_151 2 0.000 0.9629 0.00 1.00
#> HSPC_158 2 0.000 0.9629 0.00 1.00
#> HSPC_159 2 0.141 0.9518 0.02 0.98
#> HSPC_136 2 0.141 0.9518 0.02 0.98
#> HSPC_142 1 0.000 0.9767 1.00 0.00
#> HSPC_166 1 0.000 0.9767 1.00 0.00
#> HSPC_130 2 0.000 0.9629 0.00 1.00
#> HSPC_161 2 0.000 0.9629 0.00 1.00
#> HSPC_175 1 0.000 0.9767 1.00 0.00
#> HSPC_169 1 0.141 0.9631 0.98 0.02
#> HSPC_196 1 0.000 0.9767 1.00 0.00
#> HSPC_203 2 0.000 0.9629 0.00 1.00
#> Prog_193 2 0.000 0.9629 0.00 1.00
#> Prog_177 2 0.760 0.7146 0.22 0.78
#> Prog_195 1 0.000 0.9767 1.00 0.00
#> Prog_171 1 0.141 0.9631 0.98 0.02
#> HSPC_211 2 0.000 0.9629 0.00 1.00
#> HSPC_230 2 0.141 0.9518 0.02 0.98
#> HSPC_219 1 0.000 0.9767 1.00 0.00
#> HSPC_233 1 0.000 0.9767 1.00 0.00
#> HSPC_222 2 0.000 0.9629 0.00 1.00
#> Prog_223 1 0.000 0.9767 1.00 0.00
#> Prog_237 2 0.000 0.9629 0.00 1.00
#> HSPC_278 2 0.000 0.9629 0.00 1.00
#> HSPC_286 2 0.000 0.9629 0.00 1.00
#> LT-HSC_076 1 0.000 0.9767 1.00 0.00
#> Prog_283 1 0.141 0.9631 0.98 0.02
#> Prog_256 2 0.000 0.9629 0.00 1.00
#> HSPC_313 2 0.469 0.8798 0.10 0.90
#> HSPC_314 2 0.000 0.9629 0.00 1.00
#> LT-HSC_086 2 0.855 0.6171 0.28 0.72
#> HSPC_321 1 0.000 0.9767 1.00 0.00
#> HSPC_328 1 0.242 0.9454 0.96 0.04
#> HSPC_329 2 0.000 0.9629 0.00 1.00
#> LT-HSC_093 1 0.141 0.9631 0.98 0.02
#> LT-HSC_094 2 0.000 0.9629 0.00 1.00
#> HSPC_368 1 0.000 0.9767 1.00 0.00
#> HSPC_358 1 0.000 0.9767 1.00 0.00
#> HSPC_364 2 0.000 0.9629 0.00 1.00
#> HSPC_376 1 0.000 0.9767 1.00 0.00
#> HSPC_360 2 0.242 0.9398 0.04 0.96
#> HSPC_372 1 0.000 0.9767 1.00 0.00
#> HSPC_403 1 0.000 0.9767 1.00 0.00
#> HSPC_386 1 0.000 0.9767 1.00 0.00
#> HSPC_406 1 0.000 0.9767 1.00 0.00
#> HSPC_413 1 0.000 0.9767 1.00 0.00
#> HSPC_390 2 0.000 0.9629 0.00 1.00
#> HSPC_426 2 0.000 0.9629 0.00 1.00
#> Prog_411 2 0.881 0.5994 0.30 0.70
#> HSPC_440 2 0.000 0.9629 0.00 1.00
#> HSPC_466 1 0.000 0.9767 1.00 0.00
#> HSPC_461 2 0.000 0.9629 0.00 1.00
#> Prog_460 1 0.000 0.9767 1.00 0.00
#> Prog_462 2 0.000 0.9629 0.00 1.00
#> HSPC_505 1 0.000 0.9767 1.00 0.00
#> LT-HSC_122 2 0.000 0.9629 0.00 1.00
#> HSPC_489 1 0.000 0.9767 1.00 0.00
#> HSPC_509 2 0.242 0.9398 0.04 0.96
#> HSPC_486 2 0.000 0.9629 0.00 1.00
#> Prog_469 2 0.000 0.9629 0.00 1.00
#> Prog_510 2 0.000 0.9629 0.00 1.00
#> HSPC_537 2 0.000 0.9629 0.00 1.00
#> HSPC_543 1 0.000 0.9767 1.00 0.00
#> HSPC_520 2 0.141 0.9518 0.02 0.98
#> HSPC_532 1 0.000 0.9767 1.00 0.00
#> HSPC_550 2 0.242 0.9398 0.04 0.96
#> HSPC_551 1 0.000 0.9767 1.00 0.00
#> HSPC_552 1 0.000 0.9767 1.00 0.00
#> Prog_524 2 0.981 0.3118 0.42 0.58
#> Prog_519 2 0.000 0.9629 0.00 1.00
#> LT-HSC_144 1 0.000 0.9767 1.00 0.00
#> HSPC_590 1 0.000 0.9767 1.00 0.00
#> LT-HSC_148 1 0.242 0.9454 0.96 0.04
#> Prog_561 1 0.000 0.9767 1.00 0.00
#> HSPC_601 1 0.000 0.9767 1.00 0.00
#> HSPC_613 1 0.000 0.9767 1.00 0.00
#> HSPC_614 1 0.000 0.9767 1.00 0.00
#> HSPC_596 2 0.000 0.9629 0.00 1.00
#> HSPC_627 2 0.242 0.9398 0.04 0.96
#> HSPC_597 2 0.000 0.9629 0.00 1.00
#> HSPC_628 2 0.242 0.9398 0.04 0.96
#> HSPC_634 2 0.000 0.9629 0.00 1.00
#> HSPC_598 2 0.000 0.9629 0.00 1.00
#> HSPC_623 1 0.881 0.5490 0.70 0.30
#> HSPC_629 1 0.000 0.9767 1.00 0.00
#> HSPC_635 1 0.000 0.9767 1.00 0.00
#> Prog_620 2 0.990 0.2517 0.44 0.56
#> LT-HSC_166 1 0.000 0.9767 1.00 0.00
#> HSPC_643 2 0.000 0.9629 0.00 1.00
#> HSPC_661 2 0.881 0.6004 0.30 0.70
#> LT-HSC_170 2 0.000 0.9629 0.00 1.00
#> LT-HSC_171 2 0.000 0.9629 0.00 1.00
#> HSPC_652 2 0.000 0.9629 0.00 1.00
#> HSPC_665 1 0.141 0.9615 0.98 0.02
#> HSPC_654 2 0.000 0.9629 0.00 1.00
#> Prog_673 1 0.141 0.9631 0.98 0.02
#> Prog_648 1 0.000 0.9767 1.00 0.00
#> HSPC_681 2 0.000 0.9629 0.00 1.00
#> HSPC_701 1 0.000 0.9767 1.00 0.00
#> HSPC_707 1 0.000 0.9767 1.00 0.00
#> HSPC_735 2 0.000 0.9629 0.00 1.00
#> HSPC_760 1 0.000 0.9767 1.00 0.00
#> HSPC_744 1 0.000 0.9767 1.00 0.00
#> HSPC_762 2 0.000 0.9629 0.00 1.00
#> HSPC_770 2 0.242 0.9398 0.04 0.96
#> HSPC_789 1 0.000 0.9767 1.00 0.00
#> LT-HSC_207 2 0.141 0.9518 0.02 0.98
#> HSPC_772 2 0.000 0.9629 0.00 1.00
#> HSPC_790 2 0.000 0.9629 0.00 1.00
#> HSPC_779 2 0.000 0.9629 0.00 1.00
#> LT-HSC_211 2 0.000 0.9629 0.00 1.00
#> HSPC_819 1 0.000 0.9767 1.00 0.00
#> HSPC_821 2 0.000 0.9629 0.00 1.00
#> HSPC_816 1 0.000 0.9767 1.00 0.00
#> HSPC_846 1 0.904 0.5072 0.68 0.32
#> Prog_805 2 0.000 0.9629 0.00 1.00
#> Prog_849 2 0.000 0.9629 0.00 1.00
cbind(get_classes(res, k = 3), get_membership(res, k = 3))
#> class entropy silhouette p1 p2 p3
#> HSPC_025 2 0.0000 0.995 0.00 1.00 0.00
#> HSPC_037 2 0.0000 0.995 0.00 1.00 0.00
#> HSPC_008 3 0.0892 0.961 0.00 0.02 0.98
#> HSPC_020 3 0.3572 0.897 0.06 0.04 0.90
#> LT-HSC_002 2 0.0000 0.995 0.00 1.00 0.00
#> HSPC_011 1 0.0000 0.984 1.00 0.00 0.00
#> HSPC_023 2 0.0000 0.995 0.00 1.00 0.00
#> HSPC_041 1 0.1781 0.954 0.96 0.02 0.02
#> HSPC_012 2 0.0000 0.995 0.00 1.00 0.00
#> HSPC_018 1 0.0000 0.984 1.00 0.00 0.00
#> LT-HSC_007 3 0.0000 0.978 0.00 0.00 1.00
#> Prog_040 1 0.0000 0.984 1.00 0.00 0.00
#> HSPC_055 2 0.0000 0.995 0.00 1.00 0.00
#> HSPC_061 2 0.0000 0.995 0.00 1.00 0.00
#> HSPC_067 1 0.4002 0.811 0.84 0.16 0.00
#> HSPC_043 1 0.0000 0.984 1.00 0.00 0.00
#> HSPC_045 1 0.0000 0.984 1.00 0.00 0.00
#> HSPC_082 1 0.0000 0.984 1.00 0.00 0.00
#> HSPC_084 1 0.5216 0.652 0.74 0.00 0.26
#> Prog_062 3 0.0000 0.978 0.00 0.00 1.00
#> HSPC_085 1 0.0000 0.984 1.00 0.00 0.00
#> HSPC_099 2 0.0000 0.995 0.00 1.00 0.00
#> HSPC_117 2 0.0000 0.995 0.00 1.00 0.00
#> HSPC_107 2 0.0000 0.995 0.00 1.00 0.00
#> HSPC_151 2 0.0000 0.995 0.00 1.00 0.00
#> HSPC_158 2 0.0000 0.995 0.00 1.00 0.00
#> HSPC_159 2 0.0000 0.995 0.00 1.00 0.00
#> HSPC_136 2 0.0000 0.995 0.00 1.00 0.00
#> HSPC_142 1 0.0000 0.984 1.00 0.00 0.00
#> HSPC_166 2 0.0000 0.995 0.00 1.00 0.00
#> HSPC_130 2 0.0000 0.995 0.00 1.00 0.00
#> HSPC_161 2 0.0000 0.995 0.00 1.00 0.00
#> HSPC_175 1 0.0000 0.984 1.00 0.00 0.00
#> HSPC_169 3 0.1529 0.943 0.04 0.00 0.96
#> HSPC_196 1 0.0000 0.984 1.00 0.00 0.00
#> HSPC_203 3 0.0000 0.978 0.00 0.00 1.00
#> Prog_193 2 0.0000 0.995 0.00 1.00 0.00
#> Prog_177 3 0.0000 0.978 0.00 0.00 1.00
#> Prog_195 1 0.2959 0.887 0.90 0.10 0.00
#> Prog_171 1 0.4002 0.810 0.84 0.00 0.16
#> HSPC_211 3 0.0000 0.978 0.00 0.00 1.00
#> HSPC_230 2 0.0000 0.995 0.00 1.00 0.00
#> HSPC_219 1 0.0000 0.984 1.00 0.00 0.00
#> HSPC_233 1 0.0000 0.984 1.00 0.00 0.00
#> HSPC_222 3 0.0000 0.978 0.00 0.00 1.00
#> Prog_223 1 0.0000 0.984 1.00 0.00 0.00
#> Prog_237 3 0.0000 0.978 0.00 0.00 1.00
#> HSPC_278 3 0.0000 0.978 0.00 0.00 1.00
#> HSPC_286 3 0.0000 0.978 0.00 0.00 1.00
#> LT-HSC_076 1 0.0000 0.984 1.00 0.00 0.00
#> Prog_283 1 0.0000 0.984 1.00 0.00 0.00
#> Prog_256 3 0.0000 0.978 0.00 0.00 1.00
#> HSPC_313 2 0.0000 0.995 0.00 1.00 0.00
#> HSPC_314 3 0.0000 0.978 0.00 0.00 1.00
#> LT-HSC_086 3 0.0000 0.978 0.00 0.00 1.00
#> HSPC_321 1 0.0000 0.984 1.00 0.00 0.00
#> HSPC_328 3 0.0000 0.978 0.00 0.00 1.00
#> HSPC_329 3 0.0000 0.978 0.00 0.00 1.00
#> LT-HSC_093 3 0.0000 0.978 0.00 0.00 1.00
#> LT-HSC_094 3 0.0000 0.978 0.00 0.00 1.00
#> HSPC_368 1 0.0000 0.984 1.00 0.00 0.00
#> HSPC_358 1 0.0000 0.984 1.00 0.00 0.00
#> HSPC_364 2 0.0000 0.995 0.00 1.00 0.00
#> HSPC_376 1 0.0000 0.984 1.00 0.00 0.00
#> HSPC_360 2 0.0000 0.995 0.00 1.00 0.00
#> HSPC_372 1 0.0000 0.984 1.00 0.00 0.00
#> HSPC_403 1 0.0000 0.984 1.00 0.00 0.00
#> HSPC_386 1 0.1529 0.949 0.96 0.00 0.04
#> HSPC_406 1 0.0892 0.967 0.98 0.00 0.02
#> HSPC_413 1 0.0000 0.984 1.00 0.00 0.00
#> HSPC_390 3 0.0000 0.978 0.00 0.00 1.00
#> HSPC_426 2 0.0000 0.995 0.00 1.00 0.00
#> Prog_411 2 0.0000 0.995 0.00 1.00 0.00
#> HSPC_440 3 0.0000 0.978 0.00 0.00 1.00
#> HSPC_466 1 0.0000 0.984 1.00 0.00 0.00
#> HSPC_461 3 0.0000 0.978 0.00 0.00 1.00
#> Prog_460 1 0.1529 0.949 0.96 0.04 0.00
#> Prog_462 3 0.0000 0.978 0.00 0.00 1.00
#> HSPC_505 1 0.0000 0.984 1.00 0.00 0.00
#> LT-HSC_122 3 0.0000 0.978 0.00 0.00 1.00
#> HSPC_489 1 0.0000 0.984 1.00 0.00 0.00
#> HSPC_509 2 0.0000 0.995 0.00 1.00 0.00
#> HSPC_486 3 0.0000 0.978 0.00 0.00 1.00
#> Prog_469 3 0.0000 0.978 0.00 0.00 1.00
#> Prog_510 2 0.0000 0.995 0.00 1.00 0.00
#> HSPC_537 2 0.0000 0.995 0.00 1.00 0.00
#> HSPC_543 2 0.1529 0.956 0.04 0.96 0.00
#> HSPC_520 2 0.0000 0.995 0.00 1.00 0.00
#> HSPC_532 1 0.0000 0.984 1.00 0.00 0.00
#> HSPC_550 2 0.0000 0.995 0.00 1.00 0.00
#> HSPC_551 1 0.0000 0.984 1.00 0.00 0.00
#> HSPC_552 1 0.0000 0.984 1.00 0.00 0.00
#> Prog_524 2 0.0000 0.995 0.00 1.00 0.00
#> Prog_519 2 0.0892 0.976 0.00 0.98 0.02
#> LT-HSC_144 1 0.0000 0.984 1.00 0.00 0.00
#> HSPC_590 1 0.0000 0.984 1.00 0.00 0.00
#> LT-HSC_148 3 0.0000 0.978 0.00 0.00 1.00
#> Prog_561 1 0.0000 0.984 1.00 0.00 0.00
#> HSPC_601 2 0.3340 0.864 0.12 0.88 0.00
#> HSPC_613 1 0.0000 0.984 1.00 0.00 0.00
#> HSPC_614 1 0.0000 0.984 1.00 0.00 0.00
#> HSPC_596 3 0.0000 0.978 0.00 0.00 1.00
#> HSPC_627 2 0.0000 0.995 0.00 1.00 0.00
#> HSPC_597 3 0.0892 0.961 0.00 0.02 0.98
#> HSPC_628 2 0.0000 0.995 0.00 1.00 0.00
#> HSPC_634 2 0.0000 0.995 0.00 1.00 0.00
#> HSPC_598 3 0.0000 0.978 0.00 0.00 1.00
#> HSPC_623 2 0.0000 0.995 0.00 1.00 0.00
#> HSPC_629 1 0.0000 0.984 1.00 0.00 0.00
#> HSPC_635 1 0.0000 0.984 1.00 0.00 0.00
#> Prog_620 2 0.0000 0.995 0.00 1.00 0.00
#> LT-HSC_166 1 0.0000 0.984 1.00 0.00 0.00
#> HSPC_643 2 0.0000 0.995 0.00 1.00 0.00
#> HSPC_661 2 0.0000 0.995 0.00 1.00 0.00
#> LT-HSC_170 3 0.0000 0.978 0.00 0.00 1.00
#> LT-HSC_171 3 0.0000 0.978 0.00 0.00 1.00
#> HSPC_652 3 0.0000 0.978 0.00 0.00 1.00
#> HSPC_665 3 0.0892 0.961 0.02 0.00 0.98
#> HSPC_654 3 0.0000 0.978 0.00 0.00 1.00
#> Prog_673 3 0.6280 0.130 0.46 0.00 0.54
#> Prog_648 1 0.0000 0.984 1.00 0.00 0.00
#> HSPC_681 3 0.0000 0.978 0.00 0.00 1.00
#> HSPC_701 1 0.0000 0.984 1.00 0.00 0.00
#> HSPC_707 1 0.0000 0.984 1.00 0.00 0.00
#> HSPC_735 3 0.0000 0.978 0.00 0.00 1.00
#> HSPC_760 1 0.0000 0.984 1.00 0.00 0.00
#> HSPC_744 1 0.0000 0.984 1.00 0.00 0.00
#> HSPC_762 3 0.0000 0.978 0.00 0.00 1.00
#> HSPC_770 2 0.0000 0.995 0.00 1.00 0.00
#> HSPC_789 1 0.0000 0.984 1.00 0.00 0.00
#> LT-HSC_207 2 0.0000 0.995 0.00 1.00 0.00
#> HSPC_772 3 0.0000 0.978 0.00 0.00 1.00
#> HSPC_790 3 0.5216 0.645 0.00 0.26 0.74
#> HSPC_779 2 0.0000 0.995 0.00 1.00 0.00
#> LT-HSC_211 3 0.0000 0.978 0.00 0.00 1.00
#> HSPC_819 1 0.0000 0.984 1.00 0.00 0.00
#> HSPC_821 3 0.0000 0.978 0.00 0.00 1.00
#> HSPC_816 1 0.0000 0.984 1.00 0.00 0.00
#> HSPC_846 2 0.0892 0.977 0.02 0.98 0.00
#> Prog_805 2 0.0000 0.995 0.00 1.00 0.00
#> Prog_849 2 0.0000 0.995 0.00 1.00 0.00
cbind(get_classes(res, k = 4), get_membership(res, k = 4))
#> class entropy silhouette p1 p2 p3 p4
#> HSPC_025 2 0.1637 0.8882 0.06 0.94 0.00 0.00
#> HSPC_037 2 0.1637 0.9033 0.00 0.94 0.06 0.00
#> HSPC_008 3 0.5986 0.4558 0.00 0.06 0.62 0.32
#> HSPC_020 4 0.0000 0.5367 0.00 0.00 0.00 1.00
#> LT-HSC_002 2 0.0000 0.9197 0.00 1.00 0.00 0.00
#> HSPC_011 1 0.4994 0.1426 0.52 0.00 0.48 0.00
#> HSPC_023 2 0.0000 0.9197 0.00 1.00 0.00 0.00
#> HSPC_041 1 0.4936 0.5349 0.70 0.02 0.28 0.00
#> HSPC_012 2 0.3172 0.8212 0.00 0.84 0.16 0.00
#> HSPC_018 1 0.3525 0.7219 0.86 0.00 0.10 0.04
#> LT-HSC_007 3 0.1211 0.6974 0.00 0.00 0.96 0.04
#> Prog_040 1 0.0000 0.7582 1.00 0.00 0.00 0.00
#> HSPC_055 2 0.1637 0.9006 0.00 0.94 0.06 0.00
#> HSPC_061 2 0.0707 0.9156 0.00 0.98 0.02 0.00
#> HSPC_067 1 0.4553 0.6381 0.78 0.04 0.18 0.00
#> HSPC_043 1 0.2345 0.7144 0.90 0.00 0.10 0.00
#> HSPC_045 1 0.0000 0.7582 1.00 0.00 0.00 0.00
#> HSPC_082 1 0.0000 0.7582 1.00 0.00 0.00 0.00
#> HSPC_084 3 0.7028 0.1981 0.28 0.00 0.56 0.16
#> Prog_062 3 0.1211 0.6976 0.00 0.00 0.96 0.04
#> HSPC_085 1 0.1211 0.7447 0.96 0.00 0.04 0.00
#> HSPC_099 2 0.1211 0.9119 0.00 0.96 0.04 0.00
#> HSPC_117 2 0.1637 0.9021 0.00 0.94 0.06 0.00
#> HSPC_107 2 0.0000 0.9197 0.00 1.00 0.00 0.00
#> HSPC_151 2 0.0000 0.9197 0.00 1.00 0.00 0.00
#> HSPC_158 2 0.2647 0.8595 0.00 0.88 0.12 0.00
#> HSPC_159 2 0.2345 0.8605 0.00 0.90 0.00 0.10
#> HSPC_136 2 0.0000 0.9197 0.00 1.00 0.00 0.00
#> HSPC_142 1 0.0000 0.7582 1.00 0.00 0.00 0.00
#> HSPC_166 2 0.4134 0.6595 0.26 0.74 0.00 0.00
#> HSPC_130 2 0.0000 0.9197 0.00 1.00 0.00 0.00
#> HSPC_161 2 0.0707 0.9156 0.00 0.98 0.02 0.00
#> HSPC_175 1 0.3610 0.6485 0.80 0.00 0.20 0.00
#> HSPC_169 3 0.4948 0.2328 0.00 0.00 0.56 0.44
#> HSPC_196 1 0.4406 0.5224 0.70 0.00 0.30 0.00
#> HSPC_203 3 0.0000 0.6821 0.00 0.00 1.00 0.00
#> Prog_193 2 0.1211 0.9103 0.00 0.96 0.04 0.00
#> Prog_177 3 0.0707 0.6923 0.00 0.00 0.98 0.02
#> Prog_195 1 0.6049 0.5369 0.68 0.12 0.20 0.00
#> Prog_171 3 0.6104 0.3617 0.14 0.00 0.68 0.18
#> HSPC_211 3 0.3975 0.6141 0.00 0.00 0.76 0.24
#> HSPC_230 2 0.0000 0.9197 0.00 1.00 0.00 0.00
#> HSPC_219 1 0.4948 0.4972 0.56 0.00 0.00 0.44
#> HSPC_233 1 0.4277 0.6457 0.72 0.00 0.00 0.28
#> HSPC_222 3 0.0000 0.6821 0.00 0.00 1.00 0.00
#> Prog_223 1 0.0707 0.7525 0.98 0.00 0.02 0.00
#> Prog_237 3 0.1211 0.6976 0.00 0.00 0.96 0.04
#> HSPC_278 3 0.4907 0.2949 0.00 0.00 0.58 0.42
#> HSPC_286 3 0.3610 0.6452 0.00 0.00 0.80 0.20
#> LT-HSC_076 4 0.3400 0.3796 0.18 0.00 0.00 0.82
#> Prog_283 3 0.5535 0.0573 0.42 0.00 0.56 0.02
#> Prog_256 3 0.0707 0.6923 0.00 0.00 0.98 0.02
#> HSPC_313 2 0.5147 0.6934 0.06 0.74 0.20 0.00
#> HSPC_314 3 0.5106 0.5940 0.00 0.04 0.72 0.24
#> LT-HSC_086 4 0.4522 0.4192 0.00 0.00 0.32 0.68
#> HSPC_321 1 0.4948 0.4972 0.56 0.00 0.00 0.44
#> HSPC_328 3 0.2921 0.6396 0.00 0.00 0.86 0.14
#> HSPC_329 3 0.1211 0.6904 0.00 0.00 0.96 0.04
#> LT-HSC_093 4 0.1211 0.5234 0.00 0.00 0.04 0.96
#> LT-HSC_094 4 0.4522 0.4192 0.00 0.00 0.32 0.68
#> HSPC_368 1 0.0000 0.7582 1.00 0.00 0.00 0.00
#> HSPC_358 1 0.0000 0.7582 1.00 0.00 0.00 0.00
#> HSPC_364 2 0.1211 0.9114 0.00 0.96 0.04 0.00
#> HSPC_376 1 0.0000 0.7582 1.00 0.00 0.00 0.00
#> HSPC_360 2 0.0000 0.9197 0.00 1.00 0.00 0.00
#> HSPC_372 1 0.0000 0.7582 1.00 0.00 0.00 0.00
#> HSPC_403 1 0.0000 0.7582 1.00 0.00 0.00 0.00
#> HSPC_386 4 0.2345 0.5045 0.10 0.00 0.00 0.90
#> HSPC_406 4 0.2345 0.5044 0.10 0.00 0.00 0.90
#> HSPC_413 1 0.0000 0.7582 1.00 0.00 0.00 0.00
#> HSPC_390 4 0.4406 0.4435 0.00 0.00 0.30 0.70
#> HSPC_426 2 0.0000 0.9197 0.00 1.00 0.00 0.00
#> Prog_411 2 0.0000 0.9197 0.00 1.00 0.00 0.00
#> HSPC_440 3 0.4277 0.5753 0.00 0.00 0.72 0.28
#> HSPC_466 1 0.1211 0.7513 0.96 0.00 0.00 0.04
#> HSPC_461 3 0.4277 0.5753 0.00 0.00 0.72 0.28
#> Prog_460 1 0.4284 0.6395 0.78 0.02 0.20 0.00
#> Prog_462 3 0.1211 0.6976 0.00 0.00 0.96 0.04
#> HSPC_505 1 0.2335 0.7412 0.92 0.02 0.00 0.06
#> LT-HSC_122 3 0.4491 0.6425 0.00 0.06 0.80 0.14
#> HSPC_489 1 0.0000 0.7582 1.00 0.00 0.00 0.00
#> HSPC_509 2 0.0000 0.9197 0.00 1.00 0.00 0.00
#> HSPC_486 3 0.4406 0.5425 0.00 0.00 0.70 0.30
#> Prog_469 3 0.2011 0.6912 0.00 0.00 0.92 0.08
#> Prog_510 2 0.3853 0.8011 0.00 0.82 0.16 0.02
#> HSPC_537 2 0.0707 0.9156 0.00 0.98 0.02 0.00
#> HSPC_543 2 0.4977 0.1985 0.46 0.54 0.00 0.00
#> HSPC_520 2 0.4994 0.2046 0.00 0.52 0.00 0.48
#> HSPC_532 1 0.4406 0.6314 0.70 0.00 0.00 0.30
#> HSPC_550 2 0.0000 0.9197 0.00 1.00 0.00 0.00
#> HSPC_551 1 0.0000 0.7582 1.00 0.00 0.00 0.00
#> HSPC_552 4 0.5487 -0.2037 0.40 0.00 0.02 0.58
#> Prog_524 2 0.0000 0.9197 0.00 1.00 0.00 0.00
#> Prog_519 2 0.4522 0.5816 0.00 0.68 0.32 0.00
#> LT-HSC_144 1 0.4277 0.6455 0.72 0.00 0.00 0.28
#> HSPC_590 4 0.4624 -0.0128 0.34 0.00 0.00 0.66
#> LT-HSC_148 4 0.0000 0.5367 0.00 0.00 0.00 1.00
#> Prog_561 1 0.4284 0.6841 0.78 0.00 0.02 0.20
#> HSPC_601 1 0.5713 0.3464 0.62 0.34 0.04 0.00
#> HSPC_613 1 0.5606 0.4119 0.50 0.02 0.00 0.48
#> HSPC_614 1 0.4472 0.6754 0.76 0.02 0.00 0.22
#> HSPC_596 3 0.4855 0.3606 0.00 0.00 0.60 0.40
#> HSPC_627 2 0.0000 0.9197 0.00 1.00 0.00 0.00
#> HSPC_597 4 0.5173 0.3977 0.00 0.02 0.32 0.66
#> HSPC_628 2 0.0000 0.9197 0.00 1.00 0.00 0.00
#> HSPC_634 2 0.2411 0.8930 0.04 0.92 0.04 0.00
#> HSPC_598 4 0.4624 0.3901 0.00 0.00 0.34 0.66
#> HSPC_623 2 0.0000 0.9197 0.00 1.00 0.00 0.00
#> HSPC_629 1 0.0707 0.7525 0.98 0.00 0.02 0.00
#> HSPC_635 1 0.4948 0.4972 0.56 0.00 0.00 0.44
#> Prog_620 2 0.0000 0.9197 0.00 1.00 0.00 0.00
#> LT-HSC_166 1 0.4948 0.4972 0.56 0.00 0.00 0.44
#> HSPC_643 2 0.0000 0.9197 0.00 1.00 0.00 0.00
#> HSPC_661 2 0.3610 0.7574 0.00 0.80 0.00 0.20
#> LT-HSC_170 4 0.4522 0.4208 0.00 0.00 0.32 0.68
#> LT-HSC_171 4 0.4406 0.4435 0.00 0.00 0.30 0.70
#> HSPC_652 4 0.4948 0.1406 0.00 0.00 0.44 0.56
#> HSPC_665 4 0.0000 0.5367 0.00 0.00 0.00 1.00
#> HSPC_654 3 0.4277 0.5753 0.00 0.00 0.72 0.28
#> Prog_673 3 0.2830 0.6132 0.04 0.00 0.90 0.06
#> Prog_648 1 0.4948 0.4972 0.56 0.00 0.00 0.44
#> HSPC_681 4 0.4713 0.3566 0.00 0.00 0.36 0.64
#> HSPC_701 1 0.4948 0.4972 0.56 0.00 0.00 0.44
#> HSPC_707 1 0.0000 0.7582 1.00 0.00 0.00 0.00
#> HSPC_735 4 0.4994 0.0130 0.00 0.00 0.48 0.52
#> HSPC_760 1 0.4948 0.4972 0.56 0.00 0.00 0.44
#> HSPC_744 4 0.4994 -0.3862 0.48 0.00 0.00 0.52
#> HSPC_762 4 0.4994 -0.0137 0.00 0.00 0.48 0.52
#> HSPC_770 2 0.0000 0.9197 0.00 1.00 0.00 0.00
#> HSPC_789 1 0.4855 0.5415 0.60 0.00 0.00 0.40
#> LT-HSC_207 2 0.1637 0.8910 0.00 0.94 0.00 0.06
#> HSPC_772 3 0.4790 0.3949 0.00 0.00 0.62 0.38
#> HSPC_790 3 0.7028 0.3444 0.00 0.28 0.56 0.16
#> HSPC_779 2 0.1211 0.9114 0.00 0.96 0.04 0.00
#> LT-HSC_211 4 0.4713 0.3484 0.00 0.00 0.36 0.64
#> HSPC_819 1 0.4948 0.4972 0.56 0.00 0.00 0.44
#> HSPC_821 4 0.2921 0.5136 0.00 0.00 0.14 0.86
#> HSPC_816 1 0.4948 0.4972 0.56 0.00 0.00 0.44
#> HSPC_846 2 0.4553 0.7198 0.18 0.78 0.00 0.04
#> Prog_805 2 0.1211 0.9114 0.00 0.96 0.04 0.00
#> Prog_849 2 0.1637 0.9021 0.00 0.94 0.06 0.00
Heatmaps for the consensus matrix. It visualizes the probability of two samples to be in a same group.
consensus_heatmap(res, k = 2)
consensus_heatmap(res, k = 3)
consensus_heatmap(res, k = 4)
Heatmaps for the membership of samples in all partitions to see how consistent they are:
membership_heatmap(res, k = 2)
membership_heatmap(res, k = 3)
membership_heatmap(res, k = 4)
As soon as the classes for columns are determined, the signatures that are significantly different between subgroups can be looked for. Following are the heatmaps for signatures.
Signature heatmaps where rows are scaled:
Signature heatmaps where rows are not scaled:
get_signatures(res, k = 2, scale_rows = FALSE)
get_signatures(res, k = 3, scale_rows = FALSE)
get_signatures(res, k = 4, scale_rows = FALSE)
Compare the overlap of signatures from different k:
compare_signatures(res)
get_signature() returns a data frame invisibly. To get the list of signatures, the function
call should be assigned to a variable explicitly. In following code, if plot argument is set
to FALSE, no heatmap is plotted while only the differential analysis is performed.
# code only for demonstration
tb = get_signature(res, k = ..., plot = FALSE)
An example of the output of tb is:
#> which_row fdr mean_1 mean_2 scaled_mean_1 scaled_mean_2 km
#> 1 38 0.042760348 8.373488 9.131774 -0.5533452 0.5164555 1
#> 2 40 0.018707592 7.106213 8.469186 -0.6173731 0.5762149 1
#> 3 55 0.019134737 10.221463 11.207825 -0.6159697 0.5749050 1
#> 4 59 0.006059896 5.921854 7.869574 -0.6899429 0.6439467 1
#> 5 60 0.018055526 8.928898 10.211722 -0.6204761 0.5791110 1
#> 6 98 0.009384629 15.714769 14.887706 0.6635654 -0.6193277 2
...
The columns in tb are:
which_row: row indices corresponding to the input matrix.fdr: FDR for the differential test. mean_x: The mean value in group x.scaled_mean_x: The mean value in group x after rows are scaled.km: Row groups if k-means clustering is applied to rows (which is done by automatically selecting number of clusters).If there are too many signatures, top_signatures = ... can be set to only show the
signatures with the highest FDRs:
# code only for demonstration
# e.g. to show the top 500 most significant rows
tb = get_signature(res, k = ..., top_signatures = 500)
If the signatures are defined as these which are uniquely high in current group, diff_method argument
can be set to "uniquely_high_in_one_group":
# code only for demonstration
tb = get_signature(res, k = ..., diff_method = "uniquely_high_in_one_group")
UMAP plot which shows how samples are separated.
dimension_reduction(res, k = 2, method = "UMAP")
dimension_reduction(res, k = 3, method = "UMAP")
dimension_reduction(res, k = 4, method = "UMAP")
Following heatmap shows how subgroups are split when increasing k:
collect_classes(res)
If matrix rows can be associated to genes, consider to use functional_enrichment(res,
...) to perform function enrichment for the signature genes. See this vignette for more detailed explanations.
sessionInfo()
#> R version 4.1.0 (2021-05-18)
#> Platform: x86_64-pc-linux-gnu (64-bit)
#> Running under: CentOS Linux 7 (Core)
#>
#> Matrix products: default
#> BLAS/LAPACK: /usr/lib64/libopenblas-r0.3.3.so
#>
#> locale:
#> [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C LC_TIME=en_US.UTF-8
#> [4] LC_COLLATE=en_US.UTF-8 LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8
#> [7] LC_PAPER=en_US.UTF-8 LC_NAME=C LC_ADDRESS=C
#> [10] LC_TELEPHONE=C LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C
#>
#> attached base packages:
#> [1] grid parallel stats4 stats graphics grDevices utils datasets methods
#> [10] base
#>
#> other attached packages:
#> [1] genefilter_1.74.0 ComplexHeatmap_2.8.0 markdown_1.1
#> [4] knitr_1.33 scRNAseq_2.6.1 SingleCellExperiment_1.14.1
#> [7] SummarizedExperiment_1.22.0 Biobase_2.52.0 GenomicRanges_1.44.0
#> [10] GenomeInfoDb_1.28.1 IRanges_2.26.0 S4Vectors_0.30.0
#> [13] BiocGenerics_0.38.0 MatrixGenerics_1.4.0 matrixStats_0.59.0
#> [16] cola_1.9.4
#>
#> loaded via a namespace (and not attached):
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#> [22] askpass_1.1 prettyunits_1.1.1 colorspace_2.0-2
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#> [31] microbenchmark_1.4-7 jsonlite_1.7.2 impute_1.66.0
#> [34] brew_1.0-6 survival_3.2-11 iterators_1.0.13
#> [37] glue_1.4.2 polyclip_1.10-0 gtable_0.3.0
#> [40] zlibbioc_1.38.0 XVector_0.32.0 GetoptLong_1.0.5
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