cola Report for Hierarchical Partitioning - 'MessmerESC'

Date: 2021-07-26 11:03:27 CEST, cola version: 1.9.4

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Summary

First the variable is renamed to res_rh.

res_rh = rh

The partition hierarchy and all available functions which can be applied to res_rh object.

res_rh
#> A 'HierarchicalPartition' object with 'ATC:skmeans' method.
#>   On a matrix with 17869 rows and 1344 columns.
#>   Performed in total 6750 partitions.
#>   There are 30 groups under the following parameters:
#>     - min_samples: 13
#>     - mean_silhouette_cutoff: 0.9
#>     - min_n_signatures: 667 (signatures are selected based on:)
#>       - fdr_cutoff: 0.05
#>       - group_diff (scaled values): 0.5
#> 
#> Hierarchy of the partition:
#>   0, 1344 cols
#>   |-- 01, 491 cols, 12250 signatures
#>   |   |-- 011, 212 cols, 1764 signatures
#>   |   |   |-- 0111, 79 cols, 261 signatures (c)
#>   |   |   |-- 0112, 92 cols, 302 signatures (c)
#>   |   |   `-- 0113, 41 cols (a)
#>   |   |-- 012, 177 cols, 10635 signatures
#>   |   |   |-- 0121, 88 cols, 1435 signatures
#>   |   |   |   |-- 01211, 59 cols, 148 signatures (c)
#>   |   |   |   `-- 01212, 29 cols, 450 signatures (c)
#>   |   |   |-- 0122, 49 cols, 107 signatures (c)
#>   |   |   `-- 0123, 40 cols, 1878 signatures
#>   |   |       |-- 01231, 14 cols (b)
#>   |   |       |-- 01232, 12 cols (b)
#>   |   |       `-- 01233, 14 cols (b)
#>   |   |-- 013, 78 cols, 528 signatures (c)
#>   |   `-- 014, 24 cols (b)
#>   |-- 02, 403 cols, 10425 signatures
#>   |   |-- 021, 148 cols, 2688 signatures
#>   |   |   |-- 0211, 61 cols, 215 signatures (c)
#>   |   |   |-- 0212, 52 cols, 30 signatures (c)
#>   |   |   `-- 0213, 35 cols, 203 signatures (c)
#>   |   |-- 022, 127 cols, 5659 signatures
#>   |   |   |-- 0221, 74 cols, 159 signatures (c)
#>   |   |   |-- 0222, 44 cols, 910 signatures
#>   |   |   |   |-- 02221, 25 cols (b)
#>   |   |   |   `-- 02222, 19 cols (b)
#>   |   |   |-- 0223, 6 cols (b)
#>   |   |   `-- 0224, 3 cols (b)
#>   |   `-- 023, 128 cols, 1489 signatures
#>   |       |-- 0231, 72 cols, 150 signatures (c)
#>   |       `-- 0232, 56 cols, 569 signatures (c)
#>   `-- 03, 450 cols, 9665 signatures
#>       |-- 031, 146 cols, 1085 signatures
#>       |   |-- 0311, 65 cols, 121 signatures (c)
#>       |   |-- 0312, 47 cols, 105 signatures (c)
#>       |   `-- 0313, 34 cols (a)
#>       |-- 032, 98 cols, 607 signatures (c)
#>       |-- 033, 96 cols, 119 signatures (c)
#>       `-- 034, 110 cols, 5150 signatures
#>           |-- 0341, 80 cols, 313 signatures (c)
#>           `-- 0342, 30 cols, 981 signatures
#>               |-- 03421, 11 cols (b)
#>               |-- 03422, 8 cols (b)
#>               `-- 03423, 11 cols (b)
#> Stop reason:
#>   a) Mean silhouette score was too small
#>   b) Subgroup had too few columns.
#>   c) There were too few signatures.
#> 
#> Following methods can be applied to this 'HierarchicalPartition' object:
#>  [1] "all_leaves"            "all_nodes"             "cola_report"           "collect_classes"      
#>  [5] "colnames"              "compare_signatures"    "dimension_reduction"   "functional_enrichment"
#>  [9] "get_anno_col"          "get_anno"              "get_children_nodes"    "get_classes"          
#> [13] "get_matrix"            "get_signatures"        "is_leaf_node"          "max_depth"            
#> [17] "merge_node"            "ncol"                  "node_info"             "node_level"           
#> [21] "nrow"                  "rownames"              "show"                  "split_node"           
#> [25] "suggest_best_k"        "test_to_known_factors" "top_rows_heatmap"      "top_rows_overlap"     
#> 
#> You can get result for a single node by e.g. object["01"]

The call of hierarchical_partition() was:

#> hierarchical_partition(data = lt$mat, anno = lt$anno, subset = 500, cores = 4)

Dimension of the input matrix:

mat = get_matrix(res_rh)
dim(mat)
#> [1] 17869  1344

All the methods that were tried:

res_rh@param$combination_method
#> [[1]]
#> [1] "ATC"     "skmeans"

Density distribution

The density distribution for each sample is visualized as one column in the following heatmap. The clustering is based on the distance which is the Kolmogorov-Smirnov statistic between two distributions.

library(ComplexHeatmap)
densityHeatmap(mat, top_annotation = HeatmapAnnotation(df = get_anno(res_rh), 
    col = get_anno_col(res_rh)), ylab = "value", cluster_columns = TRUE, show_column_names = FALSE,
    mc.cores = 1)

plot of chunk density-heatmap

Some values about the hierarchy:

all_nodes(res_rh)
#>  [1] "0"     "01"    "011"   "0111"  "0112"  "0113"  "012"   "0121"  "01211" "01212" "0122"  "0123" 
#> [13] "01231" "01232" "01233" "013"   "014"   "02"    "021"   "0211"  "0212"  "0213"  "022"   "0221" 
#> [25] "0222"  "02221" "02222" "0223"  "0224"  "023"   "0231"  "0232"  "03"    "031"   "0311"  "0312" 
#> [37] "0313"  "032"   "033"   "034"   "0341"  "0342"  "03421" "03422" "03423"
all_leaves(res_rh)
#>  [1] "0111"  "0112"  "0113"  "01211" "01212" "0122"  "01231" "01232" "01233" "013"   "014"   "0211" 
#> [13] "0212"  "0213"  "0221"  "02221" "02222" "0223"  "0224"  "0231"  "0232"  "0311"  "0312"  "0313" 
#> [25] "032"   "033"   "0341"  "03421" "03422" "03423"
node_info(res_rh)
#>       id best_method depth best_k n_columns n_signatures p_signatures is_leaf
#> 1      0 ATC:skmeans     1      3      1344        13342      0.74666   FALSE
#> 2     01 ATC:skmeans     2      4       491        12250      0.68554   FALSE
#> 3    011 ATC:skmeans     3      3       212         1764      0.09872   FALSE
#> 4   0111 ATC:skmeans     4      2        79          261      0.01461    TRUE
#> 5   0112 ATC:skmeans     4      2        92          302      0.01690    TRUE
#> 6   0113 ATC:skmeans     4      2        41           NA           NA    TRUE
#> 7    012 ATC:skmeans     3      3       177        10635      0.59516   FALSE
#> 8   0121 ATC:skmeans     4      2        88         1435      0.08031   FALSE
#> 9  01211 ATC:skmeans     5      2        59          148      0.00828    TRUE
#> 10 01212 ATC:skmeans     5      2        29          450      0.02518    TRUE
#> 11  0122 ATC:skmeans     4      2        49          107      0.00599    TRUE
#> 12  0123 ATC:skmeans     4      3        40         1878      0.10510   FALSE
#> 13 01231 not applied     5     NA        14           NA           NA    TRUE
#> 14 01232 not applied     5     NA        12           NA           NA    TRUE
#> 15 01233 not applied     5     NA        14           NA           NA    TRUE
#> 16   013 ATC:skmeans     3      2        78          528      0.02955    TRUE
#> 17   014 not applied     3     NA        24           NA           NA    TRUE
#> 18    02 ATC:skmeans     2      3       403        10425      0.58341   FALSE
#> 19   021 ATC:skmeans     3      3       148         2688      0.15043   FALSE
#> 20  0211 ATC:skmeans     4      2        61          215      0.01203    TRUE
#> 21  0212 ATC:skmeans     4      2        52           30      0.00168    TRUE
#> 22  0213 ATC:skmeans     4      3        35          203      0.01136    TRUE
#> 23   022 ATC:skmeans     3      4       127         5659      0.31669   FALSE
#> 24  0221 ATC:skmeans     4      2        74          159      0.00890    TRUE
#> 25  0222 ATC:skmeans     4      2        44          910      0.05093   FALSE
#> 26 02221 not applied     5     NA        25           NA           NA    TRUE
#> 27 02222 not applied     5     NA        19           NA           NA    TRUE
#> 28  0223 not applied     4     NA         6           NA           NA    TRUE
#> 29  0224 not applied     4     NA         3           NA           NA    TRUE
#> 30   023 ATC:skmeans     3      2       128         1489      0.08333   FALSE
#> 31  0231 ATC:skmeans     4      2        72          150      0.00839    TRUE
#> 32  0232 ATC:skmeans     4      2        56          569      0.03184    TRUE
#> 33    03 ATC:skmeans     2      4       450         9665      0.54088   FALSE
#> 34   031 ATC:skmeans     3      3       146         1085      0.06072   FALSE
#> 35  0311 ATC:skmeans     4      2        65          121      0.00677    TRUE
#> 36  0312 ATC:skmeans     4      3        47          105      0.00588    TRUE
#> 37  0313 ATC:skmeans     4      2        34           NA           NA    TRUE
#> 38   032 ATC:skmeans     3      2        98          607      0.03397    TRUE
#> 39   033 ATC:skmeans     3      2        96          119      0.00666    TRUE
#> 40   034 ATC:skmeans     3      2       110         5150      0.28821   FALSE
#> 41  0341 ATC:skmeans     4      2        80          313      0.01752    TRUE
#> 42  0342 ATC:skmeans     4      3        30          981      0.05490   FALSE
#> 43 03421 not applied     5     NA        11           NA           NA    TRUE
#> 44 03422 not applied     5     NA         8           NA           NA    TRUE
#> 45 03423 not applied     5     NA        11           NA           NA    TRUE

In the output from node_info(), there are the following columns:

Labels of nodes are encoded in a special way. The number of digits correspond to the depth of the node in the hierarchy and the value of the digits correspond to the index of the subgroup in the current node, E.g. a label of “012” means the node is the second subgroup of the partition which is the first subgroup of the root node.

Suggest the best k

Following table shows the best k (number of partitions) for each node in the partition hierarchy. Clicking on the node name in the table goes to the corresponding section for the partitioning on that node.

The cola vignette explains the definition of the metrics used for determining the best number of partitions.

suggest_best_k(res_rh)
Node Best method Is leaf Best k 1-PAC Mean silhouette Concordance #samples
Node0 ATC:skmeans 4 1.00 0.99 1.00 1344 **
Node01 ATC:skmeans 4 1.00 0.99 0.99 491 **
Node011 ATC:skmeans 4 0.98 0.94 0.98 212 **
Node0111-leaf ATC:skmeans ✓ (c) 3 0.98 0.94 0.98 79 **
Node0112-leaf ATC:skmeans ✓ (c) 2 0.95 0.95 0.98 92 **
Node0113-leaf ATC:skmeans ✓ (a) 2 0.90 0.89 0.96 41
Node012 ATC:skmeans 3 0.92 0.97 0.97 177 *
Node0121 ATC:skmeans 3 0.98 0.93 0.97 88 **
Node01211-leaf ATC:skmeans ✓ (c) 2 0.93 0.94 0.98 59 *
Node01212-leaf ATC:skmeans ✓ (c) 2 1.00 1.00 1.00 29 **
Node0122-leaf ATC:skmeans ✓ (c) 3 0.91 0.89 0.95 49 *
Node0123 ATC:skmeans 3 1.00 0.98 0.99 40 **
Node01231-leaf not applied ✓ (b) 14
Node01232-leaf not applied ✓ (b) 12
Node01233-leaf not applied ✓ (b) 14
Node013-leaf ATC:skmeans ✓ (c) 3 0.94 0.90 0.94 78 *
Node014-leaf not applied ✓ (b) 24
Node02 ATC:skmeans 3 1.00 0.98 0.99 403 **
Node021 ATC:skmeans 4 0.93 0.93 0.96 148 *
Node0211-leaf ATC:skmeans ✓ (c) 2 1.00 0.99 1.00 61 **
Node0212-leaf ATC:skmeans ✓ (c) 2 1.00 1.00 1.00 52 **
Node0213-leaf ATC:skmeans ✓ (c) 3 0.99 0.97 0.98 35 **
Node022 ATC:skmeans 3 1.00 0.99 0.99 127 **
Node0221-leaf ATC:skmeans ✓ (c) 2 1.00 1.00 1.00 74 **
Node0222 ATC:skmeans 3 1.00 0.90 0.96 44 **
Node02221-leaf not applied ✓ (b) 25
Node02222-leaf not applied ✓ (b) 19
Node0223-leaf not applied ✓ (b) 6
Node0224-leaf not applied ✓ (b) 3
Node023 ATC:skmeans 3 0.94 0.91 0.96 128 *
Node0231-leaf ATC:skmeans ✓ (c) 2 1.00 1.00 1.00 72 **
Node0232-leaf ATC:skmeans ✓ (c) 2 1.00 0.98 0.99 56 **
Node03 ATC:skmeans 4 1.00 0.98 0.99 450 **
Node031 ATC:skmeans 4 0.94 0.93 0.96 146 *
Node0311-leaf ATC:skmeans ✓ (c) 2 1.00 1.00 1.00 65 **
Node0312-leaf ATC:skmeans ✓ (c) 3 0.92 0.92 0.96 47 *
Node0313-leaf ATC:skmeans ✓ (a) 2 0.76 0.90 0.96 34
Node032-leaf ATC:skmeans ✓ (c) 2 1.00 1.00 1.00 98 **
Node033-leaf ATC:skmeans ✓ (c) 2 1.00 0.98 0.99 96 **
Node034 ATC:skmeans 3 1.00 0.98 0.99 110 **
Node0341-leaf ATC:skmeans ✓ (c) 2 0.97 0.95 0.98 80 **
Node0342 ATC:skmeans 3 1.00 0.99 0.99 30 **
Node03421-leaf not applied ✓ (b) 11
Node03422-leaf not applied ✓ (b) 8
Node03423-leaf not applied ✓ (b) 11

Stop reason: a) Mean silhouette score was too small b) Subgroup had too few columns. c) There were too few signatures.

**: 1-PAC > 0.95, *: 1-PAC > 0.9

Partition hierarchy

The nodes of the hierarchy can be merged by setting the merge_node parameters. Here we control the hierarchy with the min_n_signatures parameter. The value of min_n_signatures is from node_info().

collect_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 910))
#> Error in dimnames(x) <- dn: length of 'dimnames' [2] not equal to array extent
collect_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 981))
#> Error in dimnames(x) <- dn: length of 'dimnames' [2] not equal to array extent
collect_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 1085))
#> Error in dimnames(x) <- dn: length of 'dimnames' [2] not equal to array extent
collect_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 1435))
#> Error in dimnames(x) <- dn: length of 'dimnames' [2] not equal to array extent
collect_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 1489))
#> Error in dimnames(x) <- dn: length of 'dimnames' [2] not equal to array extent
collect_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 1764))
#> Error in dimnames(x) <- dn: length of 'dimnames' [2] not equal to array extent
collect_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 1878))
#> Error in dimnames(x) <- dn: length of 'dimnames' [2] not equal to array extent
collect_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 2688))
#> Error in dimnames(x) <- dn: length of 'dimnames' [2] not equal to array extent
collect_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 5150))
#> Error in dimnames(x) <- dn: length of 'dimnames' [2] not equal to array extent
collect_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 5659))
#> Error in dimnames(x) <- dn: length of 'dimnames' [2] not equal to array extent
collect_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 9665))
#> Error in dimnames(x) <- dn: length of 'dimnames' [2] not equal to array extent
collect_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 10425))
#> Error in dimnames(x) <- dn: length of 'dimnames' [2] not equal to array extent
collect_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 10635))
#> Error in dimnames(x) <- dn: length of 'dimnames' [2] not equal to array extent
collect_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 12250))
#> Error in dimnames(x) <- dn: length of 'dimnames' [2] not equal to array extent
collect_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 13342))
#> Error in dimnames(x) <- dn: length of 'dimnames' [2] not equal to array extent

Following shows the table of the partitions (You need to click the show/hide code output link to see it).

show/hide code output

get_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 910))
#> lane1_3600STDY6077864_ATCACGTT_L001_15986_1 lane1_3600STDY6077865_CGATGTTT_L001_15986_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6077866_TTAGGCAT_L001_15986_1 lane1_3600STDY6077867_TGACCACT_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077868_ACAGTGGT_L001_15986_1 lane1_3600STDY6077869_GCCAATGT_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077870_CAGATCTG_L001_15986_1 lane1_3600STDY6077871_ACTTGATG_L001_15986_1 
#>                                     "01212"                                     "01211" 
#> lane1_3600STDY6077872_GATCAGCG_L001_15986_1 lane1_3600STDY6077873_TAGCTTGT_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077874_GGCTACAG_L001_15986_1 lane1_3600STDY6077875_CTTGTACT_L001_15986_1 
#>                                     "01211"                                     "01212" 
#> lane1_3600STDY6077876_TGGTTGTT_L001_15986_1 lane1_3600STDY6077877_TCTCGGTT_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077878_TAAGCGTT_L001_15986_1 lane1_3600STDY6077879_TCCGTCTT_L001_15986_1 
#>                                     "01211"                                     "01212" 
#> lane1_3600STDY6077880_TGTACCTT_L001_15986_1 lane1_3600STDY6077881_TTCTGTGT_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077882_TCTGCTGT_L001_15986_1 lane1_3600STDY6077883_TTGGAGGT_L001_15986_1 
#>                                     "01211"                                      "0221" 
#> lane1_3600STDY6077884_TCGAGCGT_L001_15986_1 lane1_3600STDY6077885_TGATACGT_L001_15986_1 
#>                                     "01212"                                     "01212" 
#> lane1_3600STDY6077886_TGCATAGT_L001_15986_1 lane1_3600STDY6077887_TTGACTCT_L001_15986_1 
#>                                     "01212"                                     "01212" 
#> lane1_3600STDY6077888_TGCGATCT_L001_15986_1 lane1_3600STDY6077889_TTCCTGCT_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077890_TAGTGACT_L001_15986_1 lane1_3600STDY6077891_TACAGGAT_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077892_TCCTCAAT_L001_15986_1 lane1_3600STDY6077893_TGTGGTTG_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077894_TAGTCTTG_L001_15986_1 lane1_3600STDY6077895_TTCCATTG_L001_15986_1 
#>                                     "01211"                                     "01212" 
#> lane1_3600STDY6077896_TCGAAGTG_L001_15986_1 lane1_3600STDY6077897_TAACGCTG_L001_15986_1 
#>                                     "01212"                                     "01212" 
#> lane1_3600STDY6077898_TTGGTATG_L001_15986_1 lane1_3600STDY6077899_TGAACTGG_L001_15986_1 
#>                                     "01211"                                      "0221" 
#> lane1_3600STDY6077900_TACTTCGG_L001_15986_1 lane1_3600STDY6077901_TCTCACGG_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077902_TCAGGAGG_L001_15986_1 lane1_3600STDY6077903_TAAGTTCG_L001_15986_1 
#>                                     "01212"                                     "01211" 
#> lane1_3600STDY6077904_TCCAGTCG_L001_15986_1 lane1_3600STDY6077905_TGTATGCG_L001_15986_1 
#>                                      "0221"                                     "01211" 
#> lane1_3600STDY6077906_TCATTGAG_L001_15986_1 lane1_3600STDY6077907_TGGCTCAG_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077908_TATGCCAG_L001_15986_1 lane1_3600STDY6077909_TCAGATTC_L001_15986_1 
#>                                     "01212"                                     "01212" 
#> lane1_3600STDY6077910_TACTAGTC_L001_15986_1 lane1_3600STDY6077911_TTCAGCTC_L001_15986_1 
#>                                     "01211"                                      "0221" 
#> lane1_3600STDY6077912_TGTCTATC_L001_15986_1 lane1_3600STDY6077913_TATGTGGC_L001_15986_1 
#>                                     "01212"                                     "01211" 
#> lane1_3600STDY6077914_TTACTCGC_L001_15986_1 lane1_3600STDY6077915_TCGTTAGC_L001_15986_1 
#>                                      "0221"                                     "01212" 
#> lane1_3600STDY6077916_TACCGAGC_L001_15986_1 lane1_3600STDY6077917_TGTTCTCC_L001_15986_1 
#>                                     "01212"                                     "01212" 
#> lane1_3600STDY6077918_TTCGCACC_L001_15986_1 lane1_3600STDY6077919_TTGCGTAC_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077920_TCTACGAC_L001_15986_1 lane1_3600STDY6077921_TGACAGAC_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077922_TAGAACAC_L001_15986_1 lane1_3600STDY6077923_TCATCCTA_L001_15986_1 
#>                                     "01211"                                     "01212" 
#> lane1_3600STDY6077924_TGCTGATA_L001_15986_1 lane1_3600STDY6077925_TAGACGGA_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077926_TGTGAAGA_L001_15986_1 lane1_3600STDY6077927_TCTCTTCA_L001_15986_1 
#>                                     "01211"                                     "01212" 
#> lane1_3600STDY6077928_TTGTTCCA_L001_15986_1 lane1_3600STDY6077929_TGAAGCCA_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077930_TACCACCA_L001_15986_1 lane1_3600STDY6077931_TGCGTGAA_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077932_GGTGAGTT_L001_15986_1 lane1_3600STDY6077933_GATCTCTT_L001_15986_1 
#>                                     "01211"                                      "0221" 
#> lane1_3600STDY6077934_GTGTCCTT_L001_15986_1 lane1_3600STDY6077935_GACGGATT_L001_15986_1 
#>                                      "0221"                                     "01211" 
#> lane1_3600STDY6077936_GCAACATT_L001_15986_1 lane1_3600STDY6077937_GGTCGTGT_L001_15986_1 
#>                                     "01212"                                     "01212" 
#> lane1_3600STDY6077938_GAATCTGT_L001_15986_1 lane1_3600STDY6077939_GTACATCT_L001_15986_1 
#>                                     "01212"                                     "01211" 
#> lane1_3600STDY6077940_GAGGTGCT_L001_15986_1 lane1_3600STDY6077941_GCATGGCT_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077942_GTTAGCCT_L001_15986_1 lane1_3600STDY6077943_GTCGCTAT_L001_15986_1 
#>                                     "01211"                                     "01212" 
#> lane1_3600STDY6077944_GGAATGAT_L001_15986_1 lane1_3600STDY6077945_GAGCCAAT_L001_15986_1 
#>                                     "01211"                                     "01212" 
#> lane1_3600STDY6077946_GCTCCTTG_L001_15986_1 lane1_3600STDY6077947_GTAAGGTG_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077948_GAGGATGG_L001_15986_1 lane1_3600STDY6077949_GTTGTCGG_L001_15986_1 
#>                                     "01212"                                     "01211" 
#> lane1_3600STDY6077950_GGATTAGG_L001_15986_1 lane1_3600STDY6077951_GATAGAGG_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077952_GTGTGTCG_L001_15986_1 lane1_3600STDY6077953_GCAATCCG_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077954_GACCTTAG_L001_15986_1 lane1_3600STDY6077955_GCCTGTTC_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077956_GCACTGTC_L001_15986_1 lane1_3600STDY6077957_GCTAACTC_L001_15986_1 
#>                                     "01211"                                     "01212" 
#> lane1_3600STDY6077958_GATTCATC_L001_15986_1 lane1_3600STDY6077959_GTCTTGGC_L001_15986_1 
#>                                     "01212"                                     "01212" 
#> lane3_3600STDY6077960_ATCACGTT_L003_15987_1 lane3_3600STDY6077961_CGATGTTT_L003_15987_1 
#>                                      "0221"                                      "0221" 
#> lane3_3600STDY6077962_TTAGGCAT_L003_15987_1 lane3_3600STDY6077963_TGACCACT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077964_ACAGTGGT_L003_15987_1 lane3_3600STDY6077965_GCCAATGT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077966_CAGATCTG_L003_15987_1 lane3_3600STDY6077967_ACTTGATG_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077968_GATCAGCG_L003_15987_1 lane3_3600STDY6077969_TAGCTTGT_L003_15987_1 
#>                                      "0122"                                     "01233" 
#> lane3_3600STDY6077970_GGCTACAG_L003_15987_1 lane3_3600STDY6077971_CTTGTACT_L003_15987_1 
#>                                     "01232"                                     "01232" 
#> lane3_3600STDY6077972_TGGTTGTT_L003_15987_1 lane3_3600STDY6077973_TCTCGGTT_L003_15987_1 
#>                                     "01233"                                      "0122" 
#> lane3_3600STDY6077974_TAAGCGTT_L003_15987_1 lane3_3600STDY6077975_TCCGTCTT_L003_15987_1 
#>                                     "01231"                                     "01231" 
#> lane3_3600STDY6077976_TGTACCTT_L003_15987_1 lane3_3600STDY6077977_TTCTGTGT_L003_15987_1 
#>                                     "01232"                                      "0122" 
#> lane3_3600STDY6077978_TCTGCTGT_L003_15987_1 lane3_3600STDY6077979_TTGGAGGT_L003_15987_1 
#>                                      "0224"                                      "0122" 
#> lane3_3600STDY6077980_TCGAGCGT_L003_15987_1 lane3_3600STDY6077981_TGATACGT_L003_15987_1 
#>                                      "0122"                                     "01233" 
#> lane3_3600STDY6077982_TGCATAGT_L003_15987_1 lane3_3600STDY6077983_TTGACTCT_L003_15987_1 
#>                                      "0122"                                     "01233" 
#> lane3_3600STDY6077984_TGCGATCT_L003_15987_1 lane3_3600STDY6077985_TTCCTGCT_L003_15987_1 
#>                                     "01233"                                      "0122" 
#> lane3_3600STDY6077986_TAGTGACT_L003_15987_1 lane3_3600STDY6077987_TACAGGAT_L003_15987_1 
#>                                     "01233"                                     "01231" 
#> lane3_3600STDY6077988_TCCTCAAT_L003_15987_1 lane3_3600STDY6077989_TGTGGTTG_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077990_TAGTCTTG_L003_15987_1 lane3_3600STDY6077991_TTCCATTG_L003_15987_1 
#>                                      "0122"                                     "01233" 
#> lane3_3600STDY6077992_TCGAAGTG_L003_15987_1 lane3_3600STDY6077993_TAACGCTG_L003_15987_1 
#>                                      "0122"                                     "01231" 
#> lane3_3600STDY6077994_TTGGTATG_L003_15987_1 lane3_3600STDY6077995_TGAACTGG_L003_15987_1 
#>                                     "01231"                                     "01231" 
#> lane3_3600STDY6077996_TACTTCGG_L003_15987_1 lane3_3600STDY6077997_TCTCACGG_L003_15987_1 
#>                                      "0122"                                      "0224" 
#> lane3_3600STDY6077998_TCAGGAGG_L003_15987_1 lane3_3600STDY6077999_TAAGTTCG_L003_15987_1 
#>                                     "01231"                                     "01231" 
#> lane3_3600STDY6078000_TCCAGTCG_L003_15987_1 lane3_3600STDY6078001_TGTATGCG_L003_15987_1 
#>                                      "0122"                                      "0221" 
#> lane3_3600STDY6078002_TCATTGAG_L003_15987_1 lane3_3600STDY6078003_TGGCTCAG_L003_15987_1 
#>                                     "03422"                                      "0122" 
#> lane3_3600STDY6078004_TATGCCAG_L003_15987_1 lane3_3600STDY6078005_TCAGATTC_L003_15987_1 
#>                                      "0122"                                     "01231" 
#> lane3_3600STDY6078006_TACTAGTC_L003_15987_1 lane3_3600STDY6078007_TTCAGCTC_L003_15987_1 
#>                                     "01231"                                      "0122" 
#> lane3_3600STDY6078008_TGTCTATC_L003_15987_1 lane3_3600STDY6078009_TATGTGGC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078010_TTACTCGC_L003_15987_1 lane3_3600STDY6078011_TCGTTAGC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078012_TACCGAGC_L003_15987_1 lane3_3600STDY6078013_TGTTCTCC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078014_TTCGCACC_L003_15987_1 lane3_3600STDY6078015_TTGCGTAC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078016_TCTACGAC_L003_15987_1 lane3_3600STDY6078017_TGACAGAC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078018_TAGAACAC_L003_15987_1 lane3_3600STDY6078019_TCATCCTA_L003_15987_1 
#>                                     "01233"                                     "01233" 
#> lane3_3600STDY6078020_TGCTGATA_L003_15987_1 lane3_3600STDY6078021_TAGACGGA_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078022_TGTGAAGA_L003_15987_1 lane3_3600STDY6078023_TCTCTTCA_L003_15987_1 
#>                                     "01231"                                     "01233" 
#> lane3_3600STDY6078024_TTGTTCCA_L003_15987_1 lane3_3600STDY6078025_TGAAGCCA_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078026_TACCACCA_L003_15987_1 lane3_3600STDY6078027_TGCGTGAA_L003_15987_1 
#>                                     "01233"                                      "0221" 
#> lane3_3600STDY6078028_GGTGAGTT_L003_15987_1 lane3_3600STDY6078029_GATCTCTT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078030_GTGTCCTT_L003_15987_1 lane3_3600STDY6078031_GACGGATT_L003_15987_1 
#>                                     "01231"                                     "01232" 
#> lane3_3600STDY6078032_GCAACATT_L003_15987_1 lane3_3600STDY6078033_GGTCGTGT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078034_GAATCTGT_L003_15987_1 lane3_3600STDY6078035_GTACATCT_L003_15987_1 
#>                                      "0122"                                     "01233" 
#> lane3_3600STDY6078036_GAGGTGCT_L003_15987_1 lane3_3600STDY6078037_GCATGGCT_L003_15987_1 
#>                                     "01231"                                      "0122" 
#> lane3_3600STDY6078038_GTTAGCCT_L003_15987_1 lane3_3600STDY6078039_GTCGCTAT_L003_15987_1 
#>                                     "01233"                                     "01233" 
#> lane3_3600STDY6078040_GGAATGAT_L003_15987_1 lane3_3600STDY6078041_GAGCCAAT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078042_GCTCCTTG_L003_15987_1 lane3_3600STDY6078043_GTAAGGTG_L003_15987_1 
#>                                     "01231"                                     "01232" 
#> lane3_3600STDY6078044_GAGGATGG_L003_15987_1 lane3_3600STDY6078045_GTTGTCGG_L003_15987_1 
#>                                     "01232"                                     "01232" 
#> lane3_3600STDY6078046_GGATTAGG_L003_15987_1 lane3_3600STDY6078047_GATAGAGG_L003_15987_1 
#>                                     "01232"                                     "01232" 
#> lane3_3600STDY6078048_GTGTGTCG_L003_15987_1 lane3_3600STDY6078049_GCAATCCG_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078050_GACCTTAG_L003_15987_1 lane3_3600STDY6078051_GCCTGTTC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078052_GCACTGTC_L003_15987_1 lane3_3600STDY6078053_GCTAACTC_L003_15987_1 
#>                                      "0122"                                     "01232" 
#> lane3_3600STDY6078054_GATTCATC_L003_15987_1 lane3_3600STDY6078055_GTCTTGGC_L003_15987_1 
#>                                     "01232"                                     "01232" 
#> lane1_3600STDY6167693_ATCACGTT_L001_17236_1 lane1_3600STDY6167694_CGATGTTT_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167695_TTAGGCAT_L001_17236_1 lane1_3600STDY6167696_TGACCACT_L001_17236_1 
#>                                     "03421"                                      "0112" 
#> lane1_3600STDY6167697_ACAGTGGT_L001_17236_1 lane1_3600STDY6167698_GCCAATGT_L001_17236_1 
#>                                      "0224"                                      "0113" 
#> lane1_3600STDY6167699_CAGATCTG_L001_17236_1 lane1_3600STDY6167700_ACTTGATG_L001_17236_1 
#>                                      "0113"                                      "0221" 
#> lane1_3600STDY6167701_GATCAGCG_L001_17236_1 lane1_3600STDY6167702_TAGCTTGT_L001_17236_1 
#>                                      "0113"                                       "014" 
#> lane1_3600STDY6167703_GGCTACAG_L001_17236_1 lane1_3600STDY6167704_CTTGTACT_L001_17236_1 
#>                                       "014"                                     "03421" 
#> lane1_3600STDY6167705_TGGTTGTT_L001_17236_1 lane1_3600STDY6167706_TCTCGGTT_L001_17236_1 
#>                                       "014"                                      "0221" 
#> lane1_3600STDY6167707_TAAGCGTT_L001_17236_1 lane1_3600STDY6167708_TCCGTCTT_L001_17236_1 
#>                                      "0221"                                       "013" 
#> lane1_3600STDY6167709_TGTACCTT_L001_17236_1 lane1_3600STDY6167710_TTCTGTGT_L001_17236_1 
#>                                      "0113"                                      "0221" 
#> lane1_3600STDY6167711_TCTGCTGT_L001_17236_1 lane1_3600STDY6167712_TTGGAGGT_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167713_TCGAGCGT_L001_17236_1 lane1_3600STDY6167714_TGATACGT_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167715_TGCATAGT_L001_17236_1 lane1_3600STDY6167716_TTGACTCT_L001_17236_1 
#>                                      "0113"                                       "013" 
#> lane1_3600STDY6167717_TGCGATCT_L001_17236_1 lane1_3600STDY6167718_TTCCTGCT_L001_17236_1 
#>                                       "013"                                      "0221" 
#> lane1_3600STDY6167719_TAGTGACT_L001_17236_1 lane1_3600STDY6167720_TACAGGAT_L001_17236_1 
#>                                     "03423"                                     "03422" 
#> lane1_3600STDY6167721_TCCTCAAT_L001_17236_1 lane1_3600STDY6167722_TGTGGTTG_L001_17236_1 
#>                                     "03423"                                      "0113" 
#> lane1_3600STDY6167723_TAGTCTTG_L001_17236_1 lane1_3600STDY6167724_TTCCATTG_L001_17236_1 
#>                                      "0113"                                      "0221" 
#> lane1_3600STDY6167725_TCGAAGTG_L001_17236_1 lane1_3600STDY6167726_TAACGCTG_L001_17236_1 
#>                                      "0113"                                       "014" 
#> lane1_3600STDY6167727_TTGGTATG_L001_17236_1 lane1_3600STDY6167728_TGAACTGG_L001_17236_1 
#>                                       "013"                                     "01212" 
#> lane1_3600STDY6167729_TACTTCGG_L001_17236_1 lane1_3600STDY6167730_TCTCACGG_L001_17236_1 
#>                                      "0111"                                       "014" 
#> lane1_3600STDY6167731_TCAGGAGG_L001_17236_1 lane1_3600STDY6167732_TAAGTTCG_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6167733_TCCAGTCG_L001_17236_1 lane1_3600STDY6167734_TGTATGCG_L001_17236_1 
#>                                      "0113"                                      "0221" 
#> lane1_3600STDY6167735_TCATTGAG_L001_17236_1 lane1_3600STDY6167736_TGGCTCAG_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167737_TATGCCAG_L001_17236_1 lane1_3600STDY6167738_TCAGATTC_L001_17236_1 
#>                                      "0113"                                       "013" 
#> lane1_3600STDY6167739_TACTAGTC_L001_17236_1 lane1_3600STDY6167740_TTCAGCTC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167741_TGTCTATC_L001_17236_1 lane1_3600STDY6167742_TATGTGGC_L001_17236_1 
#>                                      "0113"                                       "013" 
#> lane1_3600STDY6167743_TTACTCGC_L001_17236_1 lane1_3600STDY6167744_TCGTTAGC_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167745_TACCGAGC_L001_17236_1 lane1_3600STDY6167746_TGTTCTCC_L001_17236_1 
#>                                     "03421"                                      "0111" 
#> lane1_3600STDY6167747_TTCGCACC_L001_17236_1 lane1_3600STDY6167748_TTGCGTAC_L001_17236_1 
#>                                     "03421"                                      "0111" 
#> lane1_3600STDY6167749_TCTACGAC_L001_17236_1 lane1_3600STDY6167750_TGACAGAC_L001_17236_1 
#>                                      "0111"                                      "0113" 
#> lane1_3600STDY6167751_TAGAACAC_L001_17236_1 lane1_3600STDY6167752_TCATCCTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167753_TGCTGATA_L001_17236_1 lane1_3600STDY6167754_TAGACGGA_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167755_TGTGAAGA_L001_17236_1 lane1_3600STDY6167756_TCTCTTCA_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6167757_TTGTTCCA_L001_17236_1 lane1_3600STDY6167758_TGAAGCCA_L001_17236_1 
#>                                      "0111"                                      "0221" 
#> lane1_3600STDY6167759_TACCACCA_L001_17236_1 lane1_3600STDY6167760_TGCGTGAA_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6167761_GGTGAGTT_L001_17236_1 lane1_3600STDY6167762_GATCTCTT_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167763_GTGTCCTT_L001_17236_1 lane1_3600STDY6167764_GACGGATT_L001_17236_1 
#>                                      "0112"                                       "013" 
#> lane1_3600STDY6167765_GCAACATT_L001_17236_1 lane1_3600STDY6167766_GGTCGTGT_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6167767_GAATCTGT_L001_17236_1 lane1_3600STDY6167768_GTACATCT_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167769_GAGGTGCT_L001_17236_1 lane1_3600STDY6167770_GCATGGCT_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167771_GTTAGCCT_L001_17236_1 lane1_3600STDY6167772_GTCGCTAT_L001_17236_1 
#>                                      "0112"                                      "0111" 
#> lane1_3600STDY6167773_GGAATGAT_L001_17236_1 lane1_3600STDY6167774_GAGCCAAT_L001_17236_1 
#>                                      "0112"                                      "0113" 
#> lane1_3600STDY6167775_GCTCCTTG_L001_17236_1 lane1_3600STDY6167776_GTAAGGTG_L001_17236_1 
#>                                      "0111"                                      "0221" 
#> lane1_3600STDY6167777_GAGGATGG_L001_17236_1 lane1_3600STDY6167778_GTTGTCGG_L001_17236_1 
#>                                      "0112"                                      "0221" 
#> lane1_3600STDY6167779_GGATTAGG_L001_17236_1 lane1_3600STDY6167780_GATAGAGG_L001_17236_1 
#>                                      "0113"                                      "0112" 
#> lane1_3600STDY6167781_GTGTGTCG_L001_17236_1 lane1_3600STDY6167782_GCAATCCG_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167783_GACCTTAG_L001_17236_1 lane1_3600STDY6167784_GCCTGTTC_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167785_GCACTGTC_L001_17236_1 lane1_3600STDY6167786_GCTAACTC_L001_17236_1 
#>                                      "0112"                                      "0111" 
#> lane1_3600STDY6167787_GATTCATC_L001_17236_1 lane1_3600STDY6167788_GTCTTGGC_L001_17236_1 
#>                                      "0112"                                      "0221" 
#> lane1_3600STDY6167789_GTAGAAGC_L001_17236_1 lane1_3600STDY6167790_GATGGTCC_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6167791_GTGCTACC_L001_17236_1 lane1_3600STDY6167792_GCGATTAC_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167793_GGTTGGAC_L001_17236_1 lane1_3600STDY6167794_GGCACAAC_L001_17236_1 
#>                                      "0112"                                      "0111" 
#> lane1_3600STDY6167795_GACACTTA_L001_17236_1 lane1_3600STDY6167796_GTGCAGTA_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167797_GGAGTCTA_L001_17236_1 lane1_3600STDY6167798_GCTATGGA_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6167799_GAGTGCGA_L001_17236_1 lane1_3600STDY6167800_GTAACCGA_L001_17236_1 
#>                                     "03422"                                      "0111" 
#> lane1_3600STDY6167801_GGCAAGCA_L001_17236_1 lane1_3600STDY6167802_GCCTTACA_L001_17236_1 
#>                                      "0112"                                       "013" 
#> lane1_3600STDY6167803_GAACGACA_L001_17236_1 lane1_3600STDY6167804_GCAGGTAA_L001_17236_1 
#>                                       "013"                                      "0111" 
#> lane1_3600STDY6167805_GCGTCGAA_L001_17236_1 lane1_3600STDY6167806_CGTTCGGT_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6167807_CACCAGGT_L001_17236_1 lane1_3600STDY6167808_CTGCGAGT_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6167809_CCGTATCT_L001_17236_1 lane1_3600STDY6167810_CGCTTCCT_L001_17236_1 
#>                                      "0111"                                     "02222" 
#> lane1_3600STDY6167811_CAAGACCT_L001_17236_1 lane1_3600STDY6167812_CACACACT_L001_17236_1 
#>                                      "0111"                                       "014" 
#> lane1_3600STDY6167813_CCTAGTAT_L001_17236_1 lane1_3600STDY6167814_CCACCGAT_L001_17236_1 
#>                                      "0221"                                      "0112" 
#> lane1_3600STDY6167815_CTTCACAT_L001_17236_1 lane1_3600STDY6167816_CTATCATG_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167817_CATGAATG_L001_17236_1 lane1_3600STDY6167818_CCACTTGG_L001_17236_1 
#>                                     "03421"                                      "0111" 
#> lane1_3600STDY6167819_CTGTACGG_L001_17236_1 lane1_3600STDY6167820_CTAGATAG_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167821_CACTCGAG_L001_17236_1 lane1_3600STDY6167822_CCGACAAG_L001_17236_1 
#>                                     "03421"                                       "013" 
#> lane1_3600STDY6167823_CTTGCTTC_L001_17236_1 lane1_3600STDY6167824_CATAGGTC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167825_CACATTGC_L001_17236_1 lane1_3600STDY6167826_CGCTAAGC_L001_17236_1 
#>                                      "0111"                                       "014" 
#> lane1_3600STDY6167827_CAACCTCC_L001_17236_1 lane1_3600STDY6167828_CAGCTGAC_L001_17236_1 
#>                                       "013"                                      "0111" 
#> lane1_3600STDY6167829_CTCAAGAC_L001_17236_1 lane1_3600STDY6167830_CGTGTCAC_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167831_CCATGCAC_L001_17236_1 lane1_3600STDY6167832_CGTTACTA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167833_CAAGTAGA_L001_17236_1 lane1_3600STDY6167834_CTCTCTCA_L001_17236_1 
#>                                      "0111"                                      "0113" 
#> lane1_3600STDY6167835_CGACTGCA_L001_17236_1 lane1_3600STDY6167836_CCTGAGCA_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6167837_CAGGCTAA_L001_17236_1 lane1_3600STDY6167838_CGGAGGAA_L001_17236_1 
#>                                       "014"                                      "0113" 
#> lane1_3600STDY6167839_AGGAGATT_L001_17236_1 lane1_3600STDY6167840_AGGCAGCT_L001_17236_1 
#>                                       "013"                                      "0111" 
#> lane1_3600STDY6167841_ACGTTCAT_L001_17236_1 lane1_3600STDY6167842_AACGTGTG_L001_17236_1 
#>                                     "03423"                                       "013" 
#> lane1_3600STDY6167843_AGACCGTG_L001_17236_1 lane1_3600STDY6167844_ACCTCTGG_L001_17236_1 
#>                                     "03423"                                      "0221" 
#> lane1_3600STDY6167845_ATCCTAGG_L001_17236_1 lane1_3600STDY6167846_ATCAACCG_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167847_AGGTCACG_L001_17236_1 lane1_3600STDY6167848_ACTGTTAG_L001_17236_1 
#>                                      "0221"                                       "013" 
#> lane1_3600STDY6167849_AAGAGTAG_L001_17236_1 lane1_3600STDY6167850_ATTCGGAG_L001_17236_1 
#>                                       "013"                                       "014" 
#> lane1_3600STDY6167851_ACGCAATC_L001_17236_1 lane1_3600STDY6167852_ACAAGTGC_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167853_ATGGATCC_L001_17236_1 lane1_3600STDY6167854_AGAGGACC_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167855_ATCTCCAC_L001_17236_1 lane1_3600STDY6167856_ATTGGCTA_L001_17236_1 
#>                                      "0111"                                      "0113" 
#> lane1_3600STDY6167857_AATCCTGA_L001_17236_1 lane1_3600STDY6167858_AGGATTCA_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6167859_AACTGGCA_L001_17236_1 lane1_3600STDY6167860_ACAACGCA_L001_17236_1 
#>                                       "013"                                      "0112" 
#> lane1_3600STDY6167861_CGGAAACA_L001_17236_1 lane1_3600STDY6167862_AATGAATT_L001_17236_1 
#>                                      "0221"                                       "014" 
#> lane1_3600STDY6167863_TAGGACCC_L001_17236_1 lane1_3600STDY6167864_TCTCAGTG_L001_17236_1 
#>                                      "0113"                                      "0111" 
#> lane1_3600STDY6167865_CATGGGAA_L001_17236_1 lane1_3600STDY6167866_CCTAAGAT_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167867_CTCAGATA_L001_17236_1 lane1_3600STDY6167868_CCCATAGG_L001_17236_1 
#>                                      "0111"                                       "014" 
#> lane1_3600STDY6167869_GCTATGAC_L001_17236_1 lane1_3600STDY6167870_GCTGTGAA_L001_17236_1 
#>                                      "0111"                                      "0221" 
#> lane1_3600STDY6167871_ACCTTCAA_L001_17236_1 lane1_3600STDY6167872_ACAAAGCC_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6167873_CAAAACCG_L001_17236_1 lane1_3600STDY6167874_GCTGGACA_L001_17236_1 
#>                                      "0221"                                       "014" 
#> lane1_3600STDY6167875_AAGTCGTA_L001_17236_1 lane1_3600STDY6167876_CATCCGTA_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6167877_TTGTGTCT_L001_17236_1 lane1_3600STDY6167878_TGCTCTAG_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6167879_ACCCAACA_L001_17236_1 lane1_3600STDY6167880_CGATCTGA_L001_17236_1 
#>                                      "0221"                                      "0112" 
#> lane1_3600STDY6167881_GTTCCACG_L001_17236_1 lane1_3600STDY6167882_ACTCTTTC_L001_17236_1 
#>                                      "0111"                                       "013" 
#> lane1_3600STDY6167883_TATTGGAG_L001_17236_1 lane1_3600STDY6167884_TAAACATA_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6167885_GTAAGATA_L001_17236_1 lane1_3600STDY6167886_TACCGCAA_L001_17236_1 
#>                                     "03423"                                       "013" 
#> lane1_3600STDY6167887_TATCTCCT_L001_17236_1 lane1_3600STDY6167888_TGTCATCT_L001_17236_1 
#>                                     "03422"                                      "0111" 
#> lane1_3600STDY6167889_ATAGCTCT_L001_17236_1 lane1_3600STDY6167890_AGTCCAAC_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167891_TTTGGGCA_L001_17236_1 lane1_3600STDY6167892_TCTGACGC_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167893_TGTCGACT_L001_17236_1 lane1_3600STDY6167894_GTCACGTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167895_TTGAGCGA_L001_17236_1 lane1_3600STDY6167896_GAGACATA_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167897_GTCAAGCT_L001_17236_1 lane1_3600STDY6167898_AGCAAGTT_L001_17236_1 
#>                                      "0232"                                     "03423" 
#> lane1_3600STDY6167899_GACGCTCA_L001_17236_1 lane1_3600STDY6167900_ACGGCAGC_L001_17236_1 
#>                                      "0112"                                     "03421" 
#> lane1_3600STDY6167901_AGAACTGA_L001_17236_1 lane1_3600STDY6167902_CGCCTTTG_L001_17236_1 
#>                                     "03421"                                      "0112" 
#> lane1_3600STDY6167903_TAAGGTCA_L001_17236_1 lane1_3600STDY6167904_ACGTTGGC_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167905_CCAGCTTA_L001_17236_1 lane1_3600STDY6167906_GAATCCTA_L001_17236_1 
#>                                      "0113"                                      "0111" 
#> lane1_3600STDY6167907_ACTTCGTA_L001_17236_1 lane1_3600STDY6167908_TAGTCGGT_L001_17236_1 
#>                                       "013"                                      "0221" 
#> lane1_3600STDY6167909_CGCACGAG_L001_17236_1 lane1_3600STDY6167910_ACGTACTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167911_AGCGCCAA_L001_17236_1 lane1_3600STDY6167912_GCCTGCCC_L001_17236_1 
#>                                      "0113"                                      "0113" 
#> lane1_3600STDY6167913_AGGACGAT_L001_17236_1 lane1_3600STDY6167914_CTTGACCG_L001_17236_1 
#>                                      "0111"                                      "0113" 
#> lane1_3600STDY6167915_AGGTCTAA_L001_17236_1 lane1_3600STDY6167916_CGAGATCC_L001_17236_1 
#>                                       "013"                                      "0111" 
#> lane1_3600STDY6167917_ATTAGCGG_L001_17236_1 lane1_3600STDY6167918_GCGCTGAT_L001_17236_1 
#>                                      "0111"                                      "0221" 
#> lane1_3600STDY6167919_TGCTGAAC_L001_17236_1 lane1_3600STDY6167920_GAGGGCAG_L001_17236_1 
#>                                       "014"                                      "0221" 
#> lane1_3600STDY6167921_GTTTTCAC_L001_17236_1 lane1_3600STDY6167922_GAGATGCC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167923_TTGAGAAG_L001_17236_1 lane1_3600STDY6167924_GCATCCGG_L001_17236_1 
#>                                       "013"                                      "0112" 
#> lane1_3600STDY6167925_GTCACCAG_L001_17236_1 lane1_3600STDY6167926_GAGGTCGC_L001_17236_1 
#>                                      "0112"                                     "03421" 
#> lane1_3600STDY6167927_AAGGGGTA_L001_17236_1 lane1_3600STDY6167928_TTTTACGT_L001_17236_1 
#>                                      "0113"                                      "0112" 
#> lane1_3600STDY6167929_TTCCTACA_L001_17236_1 lane1_3600STDY6167930_AGTGTAGT_L001_17236_1 
#>                                      "0111"                                       "013" 
#> lane1_3600STDY6167931_GTGGCCAA_L001_17236_1 lane1_3600STDY6167932_AAATACTC_L001_17236_1 
#>                                       "013"                                       "014" 
#> lane1_3600STDY6167933_CACCCGTC_L001_17236_1 lane1_3600STDY6167934_TCGTGGTT_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6167935_ACTTGGGG_L001_17236_1 lane1_3600STDY6167936_GGCTGCTT_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6167937_CAGGGTCG_L001_17236_1 lane1_3600STDY6167938_CTCGTCGA_L001_17236_1 
#>                                      "0112"                                      "0111" 
#> lane1_3600STDY6167939_TCTACAGT_L001_17236_1 lane1_3600STDY6167940_CTTCTAGA_L001_17236_1 
#>                                      "0112"                                     "03421" 
#> lane1_3600STDY6167941_AACGGCTT_L001_17236_1 lane1_3600STDY6167942_ATAAGACT_L001_17236_1 
#>                                      "0111"                                       "013" 
#> lane1_3600STDY6167943_GTTTTTCG_L001_17236_1 lane1_3600STDY6167944_ATTGGTAT_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167945_CGCCAGTA_L001_17236_1 lane1_3600STDY6167946_AAGCCGAA_L001_17236_1 
#>                                      "0113"                                      "0113" 
#> lane1_3600STDY6167947_TGACCCAC_L001_17236_1 lane1_3600STDY6167948_ATTGCACA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167949_CTTTTGAT_L001_17236_1 lane1_3600STDY6167950_TAGCGAGA_L001_17236_1 
#>                                      "0112"                                      "0221" 
#> lane1_3600STDY6167951_TTCGCAGG_L001_17236_1 lane1_3600STDY6167952_TAGTTATT_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167953_TCCTCCGA_L001_17236_1 lane1_3600STDY6167954_GCGGGTCT_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167955_GATTCTAT_L001_17236_1 lane1_3600STDY6167956_ATGCAAAG_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167957_GTCTGAGG_L001_17236_1 lane1_3600STDY6167958_TCTGGCGA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167959_AATTTGCG_L001_17236_1 lane1_3600STDY6167960_TGGGTTGG_L001_17236_1 
#>                                      "0111"                                     "03422" 
#> lane1_3600STDY6167961_AGTTGAAA_L001_17236_1 lane1_3600STDY6167962_GACCGGAA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167963_GATCGAAC_L001_17236_1 lane1_3600STDY6167964_GTATAGGG_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167965_GGTAAGAG_L001_17236_1 lane1_3600STDY6167966_AGTCCGAT_L001_17236_1 
#>                                      "0221"                                      "0112" 
#> lane1_3600STDY6167967_ATACAGGC_L001_17236_1 lane1_3600STDY6167968_TGAGACTC_L001_17236_1 
#>                                      "0111"                                      "0113" 
#> lane1_3600STDY6167969_ACTCAGGA_L001_17236_1 lane1_3600STDY6167970_GTGTCTGA_L001_17236_1 
#>                                      "0113"                                     "03421" 
#> lane1_3600STDY6167971_CTTGAATC_L001_17236_1 lane1_3600STDY6167972_CCGCATGA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167973_AAGTAACA_L001_17236_1 lane1_3600STDY6167974_GTGGTACT_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167975_AGCTGTGC_L001_17236_1 lane1_3600STDY6167976_TTACCTTC_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167977_TCCGGGTA_L001_17236_1 lane1_3600STDY6167978_CTACGTAA_L001_17236_1 
#>                                      "0112"                                      "0111" 
#> lane1_3600STDY6167979_TCGGACCG_L001_17236_1 lane1_3600STDY6167980_ATGCGTCG_L001_17236_1 
#>                                      "0111"                                       "013" 
#> lane1_3600STDY6167981_TTCTTAGC_L001_17236_1 lane1_3600STDY6167982_TGAGTAAG_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6167983_AAGTGATA_L001_17236_1 lane1_3600STDY6167984_TCGATGCG_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167985_TATTCTGG_L001_17236_1 lane1_3600STDY6167986_AGCCGTGA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167987_AAGCCTTC_L001_17236_1 lane1_3600STDY6167988_AGGTATCC_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167989_AGGATCTC_L001_17236_1 lane1_3600STDY6167990_CTGTTTGA_L001_17236_1 
#>                                      "0221"                                      "0111" 
#> lane1_3600STDY6167991_GGAATTTC_L001_17236_1 lane1_3600STDY6167992_TTGGAGCA_L001_17236_1 
#>                                       "013"                                     "03423" 
#> lane1_3600STDY6167993_AAGGTCTG_L001_17236_1 lane1_3600STDY6167994_AATTAGGC_L001_17236_1 
#>                                     "03422"                                      "0113" 
#> lane1_3600STDY6167995_AATCGGGT_L001_17236_1 lane1_3600STDY6167996_AGGTAGAC_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167997_CTTATTCC_L001_17236_1 lane1_3600STDY6167998_CAGGCTCT_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167999_AAAGCACG_L001_17236_1 lane1_3600STDY6168000_GTATACAC_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6168001_GGACATAT_L001_17236_1 lane1_3600STDY6168002_CGGTTGGG_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6168003_GTCCGTGA_L001_17236_1 lane1_3600STDY6168004_GCCGAACC_L001_17236_1 
#>                                      "0111"                                       "013" 
#> lane1_3600STDY6168005_ACTTTACT_L001_17236_1 lane1_3600STDY6168006_GGGTCCAT_L001_17236_1 
#>                                     "03423"                                       "013" 
#> lane1_3600STDY6168007_ATAACTAG_L001_17236_1 lane1_3600STDY6168008_AATAGAGA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6168009_TCACCATT_L001_17236_1 lane1_3600STDY6168010_CGCCTGAT_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6168011_GCGTGAAC_L001_17236_1 lane1_3600STDY6168012_TAAGGGTG_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6168013_GGTGTCGA_L001_17236_1 lane1_3600STDY6168014_CCGTTAGG_L001_17236_1 
#>                                      "0112"                                       "013" 
#> lane1_3600STDY6168015_TGGCAAAA_L001_17236_1 lane1_3600STDY6168016_CCTACCCG_L001_17236_1 
#>                                      "0111"                                     "02222" 
#> lane1_3600STDY6168017_AACAGCGC_L001_17236_1 lane1_3600STDY6168018_TATACATC_L001_17236_1 
#>                                       "013"                                      "0221" 
#> lane1_3600STDY6168019_AAGCGACT_L001_17236_1 lane1_3600STDY6168020_GAAGCGCA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6168021_ACCTCTAC_L001_17236_1 lane1_3600STDY6168022_GATTGCGT_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6168023_GCTGGTTG_L001_17236_1 lane1_3600STDY6168024_ATCGTCCT_L001_17236_1 
#>                                      "0221"                                      "0112" 
#> lane1_3600STDY6168025_GGACACGG_L001_17236_1 lane1_3600STDY6168026_CGCACCTA_L001_17236_1 
#>                                      "0112"                                      "0111" 
#> lane1_3600STDY6168027_CTTCGGCT_L001_17236_1 lane1_3600STDY6168028_CGAATCGA_L001_17236_1 
#>                                      "0111"                                       "014" 
#> lane1_3600STDY6168029_TAACAACT_L001_17236_1 lane1_3600STDY6168030_AGCTCTTT_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168031_TAATCCCT_L001_17236_1 lane1_3600STDY6168032_AGGACACT_L001_17236_1 
#>                                      "0113"                                     "03423" 
#> lane1_3600STDY6168033_TTACACTA_L001_17236_1 lane1_3600STDY6168034_AAACATCA_L001_17236_1 
#>                                      "0111"                                      "0113" 
#> lane1_3600STDY6168035_CCATAGCT_L001_17236_1 lane1_3600STDY6168036_GTTATGGC_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6168037_ATCCCCTA_L001_17236_1 lane1_3600STDY6168038_CATACTAC_L001_17236_1 
#>                                      "0111"                                       "014" 
#> lane1_3600STDY6168039_CAATTGTT_L001_17236_1 lane1_3600STDY6168040_AAACCCGT_L001_17236_1 
#>                                       "014"                                      "0221" 
#> lane1_3600STDY6168041_CAGATTTC_L001_17236_1 lane1_3600STDY6168042_GCGTAGGT_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6168043_GGCATTCG_L001_17236_1 lane1_3600STDY6168044_TGGGGCTT_L001_17236_1 
#>                                      "0113"                                      "0112" 
#> lane1_3600STDY6168045_CTGACTAC_L001_17236_1 lane1_3600STDY6168046_AACTTTTA_L001_17236_1 
#>                                      "0112"                                     "03423" 
#> lane1_3600STDY6168047_AGGGATTC_L001_17236_1 lane1_3600STDY6168048_CCGAGTAG_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6168049_GGGGACTA_L001_17236_1 lane1_3600STDY6168050_GGAGTTGA_L001_17236_1 
#>                                      "0113"                                      "0111" 
#> lane1_3600STDY6168051_AGCTCATC_L001_17236_1 lane1_3600STDY6168052_TAATCAAC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168053_ACTGGTCG_L001_17236_1 lane1_3600STDY6168054_GACGATTG_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168055_AGCGATGA_L001_17236_1 lane1_3600STDY6168056_GAAGAGAT_L001_17236_1 
#>                                      "0113"                                     "03423" 
#> lane1_3600STDY6168057_CGTATGCA_L001_17236_1 lane1_3600STDY6168058_CACGTGCG_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6168059_GCTTAAAC_L001_17236_1 lane1_3600STDY6168060_GTTCCGCA_L001_17236_1 
#>                                       "013"                                      "0111" 
#> lane1_3600STDY6168061_GTATCGTC_L001_17236_1 lane1_3600STDY6168062_GTCCTCAC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168063_GTACGGAC_L001_17236_1 lane1_3600STDY6168064_CATTTTGC_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6168065_TCCTCTCT_L001_17236_1 lane1_3600STDY6168066_AGCAACGA_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6168067_ACAGAAGA_L001_17236_1 lane1_3600STDY6168068_CGACCCTT_L001_17236_1 
#>                                       "013"                                      "0111" 
#> lane1_3600STDY6168069_CTGCCTAG_L001_17236_1 lane1_3600STDY6168070_GAGCGCAT_L001_17236_1 
#>                                      "0221"                                       "013" 
#> lane1_3600STDY6168071_AACTTATC_L001_17236_1 lane1_3600STDY6168072_CCGATGTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168073_TTACTACC_L001_17236_1 lane1_3600STDY6168074_CAAGGAGC_L001_17236_1 
#>                                       "013"                                       "014" 
#> lane1_3600STDY6168075_TGGTTGAC_L001_17236_1 lane1_3600STDY6168076_ACCTGCTG_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane4_3600STDY6184181_ATCACGTT_L004_17480_1 lane4_3600STDY6184182_CGATGTTT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184183_TTAGGCAT_L004_17480_1 lane4_3600STDY6184184_TGACCACT_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184185_ACAGTGGT_L004_17480_1 lane4_3600STDY6184186_GCCAATGT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184187_CAGATCTG_L004_17480_1 lane4_3600STDY6184188_ACTTGATG_L004_17480_1 
#>                                       "032"                                      "0211" 
#> lane4_3600STDY6184189_GATCAGCG_L004_17480_1 lane4_3600STDY6184190_TAGCTTGT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184191_GGCTACAG_L004_17480_1 lane4_3600STDY6184192_CTTGTACT_L004_17480_1 
#>                                       "032"                                      "0211" 
#> lane4_3600STDY6184193_TGGTTGTT_L004_17480_1 lane4_3600STDY6184194_TCTCGGTT_L004_17480_1 
#>                                       "032"                                      "0312" 
#> lane4_3600STDY6184195_TAAGCGTT_L004_17480_1 lane4_3600STDY6184196_TCCGTCTT_L004_17480_1 
#>                                      "0312"                                      "0341" 
#> lane4_3600STDY6184197_TGTACCTT_L004_17480_1 lane4_3600STDY6184198_TTCTGTGT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184199_TCTGCTGT_L004_17480_1 lane4_3600STDY6184200_TTGGAGGT_L004_17480_1 
#>                                      "0212"                                      "0212" 
#> lane4_3600STDY6184201_TCGAGCGT_L004_17480_1 lane4_3600STDY6184202_TGATACGT_L004_17480_1 
#>                                      "0313"                                       "032" 
#> lane4_3600STDY6184203_TGCATAGT_L004_17480_1 lane4_3600STDY6184204_TTGACTCT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184205_TGCGATCT_L004_17480_1 lane4_3600STDY6184206_TTCCTGCT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184207_TAGTGACT_L004_17480_1 lane4_3600STDY6184208_TACAGGAT_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184209_TCCTCAAT_L004_17480_1 lane4_3600STDY6184210_TGTGGTTG_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184211_TAGTCTTG_L004_17480_1 lane4_3600STDY6184212_TTCCATTG_L004_17480_1 
#>                                      "0212"                                      "0211" 
#> lane4_3600STDY6184213_TCGAAGTG_L004_17480_1 lane4_3600STDY6184214_TAACGCTG_L004_17480_1 
#>                                      "0221"                                      "0341" 
#> lane4_3600STDY6184215_TTGGTATG_L004_17480_1 lane4_3600STDY6184216_TGAACTGG_L004_17480_1 
#>                                      "0213"                                     "02221" 
#> lane4_3600STDY6184217_TACTTCGG_L004_17480_1 lane4_3600STDY6184218_TCTCACGG_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184219_TCAGGAGG_L004_17480_1 lane4_3600STDY6184220_TAAGTTCG_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184221_TCCAGTCG_L004_17480_1 lane4_3600STDY6184222_TGTATGCG_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184223_TCATTGAG_L004_17480_1 lane4_3600STDY6184224_TGGCTCAG_L004_17480_1 
#>                                      "0212"                                      "0213" 
#> lane4_3600STDY6184225_TATGCCAG_L004_17480_1 lane4_3600STDY6184226_TCAGATTC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184227_TACTAGTC_L004_17480_1 lane4_3600STDY6184228_TTCAGCTC_L004_17480_1 
#>                                      "0212"                                       "032" 
#> lane4_3600STDY6184229_TGTCTATC_L004_17480_1 lane4_3600STDY6184230_TATGTGGC_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184231_TTACTCGC_L004_17480_1 lane4_3600STDY6184232_TCGTTAGC_L004_17480_1 
#>                                      "0213"                                      "0341" 
#> lane4_3600STDY6184233_TACCGAGC_L004_17480_1 lane4_3600STDY6184234_TGTTCTCC_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184235_TTCGCACC_L004_17480_1 lane4_3600STDY6184236_TTGCGTAC_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184237_TCTACGAC_L004_17480_1 lane4_3600STDY6184238_TGACAGAC_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184239_TAGAACAC_L004_17480_1 lane4_3600STDY6184240_TCATCCTA_L004_17480_1 
#>                                      "0212"                                      "0212" 
#> lane4_3600STDY6184241_TGCTGATA_L004_17480_1 lane4_3600STDY6184242_TAGACGGA_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184243_TGTGAAGA_L004_17480_1 lane4_3600STDY6184244_TCTCTTCA_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184245_TTGTTCCA_L004_17480_1 lane4_3600STDY6184246_TGAAGCCA_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184247_TACCACCA_L004_17480_1 lane4_3600STDY6184248_TGCGTGAA_L004_17480_1 
#>                                     "02221"                                      "0212" 
#> lane4_3600STDY6184249_GGTGAGTT_L004_17480_1 lane4_3600STDY6184250_GATCTCTT_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184251_GTGTCCTT_L004_17480_1 lane4_3600STDY6184252_GACGGATT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184253_GCAACATT_L004_17480_1 lane4_3600STDY6184254_GGTCGTGT_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184255_GAATCTGT_L004_17480_1 lane4_3600STDY6184256_GTACATCT_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184257_GAGGTGCT_L004_17480_1 lane4_3600STDY6184258_GCATGGCT_L004_17480_1 
#>                                      "0232"                                      "0211" 
#> lane4_3600STDY6184259_GTTAGCCT_L004_17480_1 lane4_3600STDY6184260_GTCGCTAT_L004_17480_1 
#>                                      "0211"                                     "02221" 
#> lane4_3600STDY6184261_GGAATGAT_L004_17480_1 lane4_3600STDY6184262_GAGCCAAT_L004_17480_1 
#>                                      "0232"                                      "0212" 
#> lane4_3600STDY6184263_GCTCCTTG_L004_17480_1 lane4_3600STDY6184264_GTAAGGTG_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184265_GAGGATGG_L004_17480_1 lane4_3600STDY6184266_GTTGTCGG_L004_17480_1 
#>                                      "0211"                                       "032" 
#> lane4_3600STDY6184267_GGATTAGG_L004_17480_1 lane4_3600STDY6184268_GATAGAGG_L004_17480_1 
#>                                      "0213"                                      "0211" 
#> lane4_3600STDY6184269_GTGTGTCG_L004_17480_1 lane4_3600STDY6184270_GCAATCCG_L004_17480_1 
#>                                      "0341"                                      "0232" 
#> lane4_3600STDY6184271_GACCTTAG_L004_17480_1 lane4_3600STDY6184272_GCCTGTTC_L004_17480_1 
#>                                     "02221"                                      "0211" 
#> lane4_3600STDY6184273_GCACTGTC_L004_17480_1 lane4_3600STDY6184274_GCTAACTC_L004_17480_1 
#>                                      "0211"                                      "0341" 
#> lane4_3600STDY6184275_GATTCATC_L004_17480_1 lane4_3600STDY6184276_GTCTTGGC_L004_17480_1 
#>                                      "0213"                                       "032" 
#> lane4_3600STDY6184277_GTAGAAGC_L004_17480_1 lane4_3600STDY6184278_GATGGTCC_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184279_GTGCTACC_L004_17480_1 lane4_3600STDY6184280_GCGATTAC_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184281_GGTTGGAC_L004_17480_1 lane4_3600STDY6184282_GGCACAAC_L004_17480_1 
#>                                      "0341"                                     "02221" 
#> lane4_3600STDY6184283_GACACTTA_L004_17480_1 lane4_3600STDY6184284_GTGCAGTA_L004_17480_1 
#>                                      "0211"                                      "0341" 
#> lane4_3600STDY6184285_GGAGTCTA_L004_17480_1 lane4_3600STDY6184286_GCTATGGA_L004_17480_1 
#>                                      "0212"                                      "0211" 
#> lane4_3600STDY6184287_GAGTGCGA_L004_17480_1 lane4_3600STDY6184288_GTAACCGA_L004_17480_1 
#>                                      "0212"                                      "0212" 
#> lane4_3600STDY6184289_GGCAAGCA_L004_17480_1 lane4_3600STDY6184290_GCCTTACA_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184291_GAACGACA_L004_17480_1 lane4_3600STDY6184292_GCAGGTAA_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184293_GCGTCGAA_L004_17480_1 lane4_3600STDY6184294_CGTTCGGT_L004_17480_1 
#>                                      "0341"                                     "02221" 
#> lane4_3600STDY6184295_CACCAGGT_L004_17480_1 lane4_3600STDY6184296_CTGCGAGT_L004_17480_1 
#>                                      "0211"                                      "0341" 
#> lane4_3600STDY6184297_CCGTATCT_L004_17480_1 lane4_3600STDY6184298_CGCTTCCT_L004_17480_1 
#>                                      "0211"                                      "0341" 
#> lane4_3600STDY6184299_CAAGACCT_L004_17480_1 lane4_3600STDY6184300_CACACACT_L004_17480_1 
#>                                      "0211"                                       "032" 
#> lane4_3600STDY6184301_CCTAGTAT_L004_17480_1 lane4_3600STDY6184302_CCACCGAT_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184303_CTTCACAT_L004_17480_1 lane4_3600STDY6184304_CTATCATG_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184305_CATGAATG_L004_17480_1 lane4_3600STDY6184306_CCACTTGG_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184307_CTGTACGG_L004_17480_1 lane4_3600STDY6184308_CTAGATAG_L004_17480_1 
#>                                      "0211"                                      "0341" 
#> lane4_3600STDY6184309_CACTCGAG_L004_17480_1 lane4_3600STDY6184310_CCGACAAG_L004_17480_1 
#>                                     "02221"                                       "032" 
#> lane4_3600STDY6184311_CTTGCTTC_L004_17480_1 lane4_3600STDY6184312_CATAGGTC_L004_17480_1 
#>                                      "0212"                                     "02222" 
#> lane4_3600STDY6184313_CACATTGC_L004_17480_1 lane4_3600STDY6184314_CGCTAAGC_L004_17480_1 
#>                                      "0213"                                      "0212" 
#> lane4_3600STDY6184315_CAACCTCC_L004_17480_1 lane4_3600STDY6184316_CAGCTGAC_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184317_CTCAAGAC_L004_17480_1 lane4_3600STDY6184318_CGTGTCAC_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184319_CCATGCAC_L004_17480_1 lane4_3600STDY6184320_CGTTACTA_L004_17480_1 
#>                                     "02221"                                      "0341" 
#> lane4_3600STDY6184321_CAAGTAGA_L004_17480_1 lane4_3600STDY6184322_CTCTCTCA_L004_17480_1 
#>                                      "0213"                                      "0211" 
#> lane4_3600STDY6184323_CGACTGCA_L004_17480_1 lane4_3600STDY6184324_CCTGAGCA_L004_17480_1 
#>                                      "0212"                                     "02222" 
#> lane4_3600STDY6184325_CAGGCTAA_L004_17480_1 lane4_3600STDY6184326_CGGAGGAA_L004_17480_1 
#>                                       "032"                                      "0211" 
#> lane4_3600STDY6184327_AGGAGATT_L004_17480_1 lane4_3600STDY6184328_AGGCAGCT_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184329_ACGTTCAT_L004_17480_1 lane4_3600STDY6184330_AACGTGTG_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184331_AGACCGTG_L004_17480_1 lane4_3600STDY6184332_ACCTCTGG_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184333_ATCCTAGG_L004_17480_1 lane4_3600STDY6184334_ATCAACCG_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184335_AGGTCACG_L004_17480_1 lane4_3600STDY6184336_ACTGTTAG_L004_17480_1 
#>                                       "032"                                      "0211" 
#> lane4_3600STDY6184337_AAGAGTAG_L004_17480_1 lane4_3600STDY6184338_ATTCGGAG_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184339_ACGCAATC_L004_17480_1 lane4_3600STDY6184340_ACAAGTGC_L004_17480_1 
#>                                      "0213"                                      "0211" 
#> lane4_3600STDY6184341_ATGGATCC_L004_17480_1 lane4_3600STDY6184342_AGAGGACC_L004_17480_1 
#>                                      "0212"                                     "02222" 
#> lane4_3600STDY6184343_ATCTCCAC_L004_17480_1 lane4_3600STDY6184344_ATTGGCTA_L004_17480_1 
#>                                      "0213"                                      "0212" 
#> lane4_3600STDY6184345_AATCCTGA_L004_17480_1 lane4_3600STDY6184346_AGGATTCA_L004_17480_1 
#>                                       "032"                                     "02221" 
#> lane4_3600STDY6184347_AACTGGCA_L004_17480_1 lane4_3600STDY6184348_ACAACGCA_L004_17480_1 
#>                                      "0221"                                     "02222" 
#> lane4_3600STDY6184349_CGGAAACA_L004_17480_1 lane4_3600STDY6184350_AATGAATT_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184351_TAGGACCC_L004_17480_1 lane4_3600STDY6184352_TCTCAGTG_L004_17480_1 
#>                                      "0341"                                     "02221" 
#> lane4_3600STDY6184353_CATGGGAA_L004_17480_1 lane4_3600STDY6184354_CCTAAGAT_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184355_CTCAGATA_L004_17480_1 lane4_3600STDY6184356_CCCATAGG_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184357_GCTATGAC_L004_17480_1 lane4_3600STDY6184358_GCTGTGAA_L004_17480_1 
#>                                     "02222"                                     "02222" 
#> lane4_3600STDY6184359_ACCTTCAA_L004_17480_1 lane4_3600STDY6184360_ACAAAGCC_L004_17480_1 
#>                                      "0223"                                      "0221" 
#> lane4_3600STDY6184361_CAAAACCG_L004_17480_1 lane4_3600STDY6184362_GCTGGACA_L004_17480_1 
#>                                      "0211"                                       "032" 
#> lane4_3600STDY6184363_AAGTCGTA_L004_17480_1 lane4_3600STDY6184364_CATCCGTA_L004_17480_1 
#>                                      "0211"                                      "0232" 
#> lane4_3600STDY6184365_TTGTGTCT_L004_17480_1 lane4_3600STDY6184366_TGCTCTAG_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184367_ACCCAACA_L004_17480_1 lane4_3600STDY6184368_CGATCTGA_L004_17480_1 
#>                                     "02222"                                      "0211" 
#> lane4_3600STDY6184369_GTTCCACG_L004_17480_1 lane4_3600STDY6184370_ACTCTTTC_L004_17480_1 
#>                                      "0212"                                      "0213" 
#> lane4_3600STDY6184371_TATTGGAG_L004_17480_1 lane4_3600STDY6184372_TAAACATA_L004_17480_1 
#>                                      "0221"                                      "0221" 
#> lane4_3600STDY6184373_GTAAGATA_L004_17480_1 lane4_3600STDY6184374_TACCGCAA_L004_17480_1 
#>                                      "0223"                                       "032" 
#> lane4_3600STDY6184375_TATCTCCT_L004_17480_1 lane4_3600STDY6184376_TGTCATCT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184377_ATAGCTCT_L004_17480_1 lane4_3600STDY6184378_AGTCCAAC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184379_TTTGGGCA_L004_17480_1 lane4_3600STDY6184380_TCTGACGC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184381_TGTCGACT_L004_17480_1 lane4_3600STDY6184382_GTCACGTA_L004_17480_1 
#>                                       "032"                                      "0313" 
#> lane4_3600STDY6184383_TTGAGCGA_L004_17480_1 lane4_3600STDY6184384_GAGACATA_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184385_GTCAAGCT_L004_17480_1 lane4_3600STDY6184386_AGCAAGTT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184387_GACGCTCA_L004_17480_1 lane4_3600STDY6184388_ACGGCAGC_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184389_AGAACTGA_L004_17480_1 lane4_3600STDY6184390_CGCCTTTG_L004_17480_1 
#>                                      "0212"                                     "02221" 
#> lane4_3600STDY6184391_TAAGGTCA_L004_17480_1 lane4_3600STDY6184392_ACGTTGGC_L004_17480_1 
#>                                     "02222"                                      "0212" 
#> lane4_3600STDY6184393_CCAGCTTA_L004_17480_1 lane4_3600STDY6184394_GAATCCTA_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184395_ACTTCGTA_L004_17480_1 lane4_3600STDY6184396_TAGTCGGT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184397_CGCACGAG_L004_17480_1 lane4_3600STDY6184398_ACGTACTA_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184399_AGCGCCAA_L004_17480_1 lane4_3600STDY6184400_GCCTGCCC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184401_AGGACGAT_L004_17480_1 lane4_3600STDY6184402_CTTGACCG_L004_17480_1 
#>                                      "0213"                                       "032" 
#> lane4_3600STDY6184403_AGGTCTAA_L004_17480_1 lane4_3600STDY6184404_CGAGATCC_L004_17480_1 
#>                                      "0213"                                       "032" 
#> lane4_3600STDY6184405_ATTAGCGG_L004_17480_1 lane4_3600STDY6184406_GCGCTGAT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184407_TGCTGAAC_L004_17480_1 lane4_3600STDY6184408_GAGGGCAG_L004_17480_1 
#>                                       "032"                                      "0213" 
#> lane4_3600STDY6184409_GTTTTCAC_L004_17480_1 lane4_3600STDY6184410_GAGATGCC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184411_TTGAGAAG_L004_17480_1 lane4_3600STDY6184412_GCATCCGG_L004_17480_1 
#>                                       "032"                                      "0232" 
#> lane4_3600STDY6184413_GTCACCAG_L004_17480_1 lane4_3600STDY6184414_GAGGTCGC_L004_17480_1 
#>                                      "0211"                                     "02221" 
#> lane4_3600STDY6184415_AAGGGGTA_L004_17480_1 lane4_3600STDY6184416_TTTTACGT_L004_17480_1 
#>                                      "0212"                                      "0211" 
#> lane4_3600STDY6184417_TTCCTACA_L004_17480_1 lane4_3600STDY6184418_AGTGTAGT_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184419_GTGGCCAA_L004_17480_1 lane4_3600STDY6184420_AAATACTC_L004_17480_1 
#>                                      "0212"                                       "032" 
#> lane4_3600STDY6184421_CACCCGTC_L004_17480_1 lane4_3600STDY6184422_TCGTGGTT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184423_ACTTGGGG_L004_17480_1 lane4_3600STDY6184424_GGCTGCTT_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184425_CAGGGTCG_L004_17480_1 lane4_3600STDY6184426_CTCGTCGA_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184427_TCTACAGT_L004_17480_1 lane4_3600STDY6184428_CTTCTAGA_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184429_AACGGCTT_L004_17480_1 lane4_3600STDY6184430_ATAAGACT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184431_GTTTTTCG_L004_17480_1 lane4_3600STDY6184432_ATTGGTAT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184433_CGCCAGTA_L004_17480_1 lane4_3600STDY6184434_AAGCCGAA_L004_17480_1 
#>                                      "0223"                                       "032" 
#> lane4_3600STDY6184435_TGACCCAC_L004_17480_1 lane4_3600STDY6184436_ATTGCACA_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184437_CTTTTGAT_L004_17480_1 lane4_3600STDY6184438_TAGCGAGA_L004_17480_1 
#>                                      "0213"                                     "02222" 
#> lane4_3600STDY6184439_TTCGCAGG_L004_17480_1 lane4_3600STDY6184440_TAGTTATT_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184441_TCCTCCGA_L004_17480_1 lane4_3600STDY6184442_GCGGGTCT_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184443_GATTCTAT_L004_17480_1 lane4_3600STDY6184444_ATGCAAAG_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184445_GTCTGAGG_L004_17480_1 lane4_3600STDY6184446_TCTGGCGA_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184447_AATTTGCG_L004_17480_1 lane4_3600STDY6184448_TGGGTTGG_L004_17480_1 
#>                                     "02221"                                      "0232" 
#> lane4_3600STDY6184449_AGTTGAAA_L004_17480_1 lane4_3600STDY6184450_GACCGGAA_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184451_GATCGAAC_L004_17480_1 lane4_3600STDY6184452_GTATAGGG_L004_17480_1 
#>                                     "03422"                                      "0341" 
#> lane4_3600STDY6184453_GGTAAGAG_L004_17480_1 lane4_3600STDY6184454_AGTCCGAT_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184455_ATACAGGC_L004_17480_1 lane4_3600STDY6184456_TGAGACTC_L004_17480_1 
#>                                      "0213"                                     "02222" 
#> lane4_3600STDY6184457_ACTCAGGA_L004_17480_1 lane4_3600STDY6184458_GTGTCTGA_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184459_CTTGAATC_L004_17480_1 lane4_3600STDY6184460_CCGCATGA_L004_17480_1 
#>                                      "0211"                                     "02221" 
#> lane4_3600STDY6184461_AAGTAACA_L004_17480_1 lane4_3600STDY6184462_GTGGTACT_L004_17480_1 
#>                                     "02222"                                     "02221" 
#> lane4_3600STDY6184463_AGCTGTGC_L004_17480_1 lane4_3600STDY6184464_TTACCTTC_L004_17480_1 
#>                                     "02221"                                     "02221" 
#> lane4_3600STDY6184465_TCCGGGTA_L004_17480_1 lane4_3600STDY6184466_CTACGTAA_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184467_TCGGACCG_L004_17480_1 lane4_3600STDY6184468_ATGCGTCG_L004_17480_1 
#>                                      "0211"                                       "032" 
#> lane4_3600STDY6184469_TTCTTAGC_L004_17480_1 lane4_3600STDY6184470_TGAGTAAG_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184471_AAGTGATA_L004_17480_1 lane4_3600STDY6184472_TCGATGCG_L004_17480_1 
#>                                      "0213"                                      "0341" 
#> lane4_3600STDY6184473_TATTCTGG_L004_17480_1 lane4_3600STDY6184474_AGCCGTGA_L004_17480_1 
#>                                      "0213"                                      "0211" 
#> lane4_3600STDY6184475_AAGCCTTC_L004_17480_1 lane4_3600STDY6184476_AGGTATCC_L004_17480_1 
#>                                      "0213"                                      "0341" 
#> lane4_3600STDY6184477_AGGATCTC_L004_17480_1 lane4_3600STDY6184478_CTGTTTGA_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184479_GGAATTTC_L004_17480_1 lane4_3600STDY6184480_TTGGAGCA_L004_17480_1 
#>                                      "0341"                                      "0213" 
#> lane4_3600STDY6184481_AAGGTCTG_L004_17480_1 lane4_3600STDY6184482_AATTAGGC_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184483_AATCGGGT_L004_17480_1 lane4_3600STDY6184484_AGGTAGAC_L004_17480_1 
#>                                      "0212"                                      "0212" 
#> lane4_3600STDY6184485_CTTATTCC_L004_17480_1 lane4_3600STDY6184486_CAGGCTCT_L004_17480_1 
#>                                      "0341"                                     "02222" 
#> lane4_3600STDY6184487_AAAGCACG_L004_17480_1 lane4_3600STDY6184488_GTATACAC_L004_17480_1 
#>                                     "02222"                                      "0211" 
#> lane4_3600STDY6184489_GGACATAT_L004_17480_1 lane4_3600STDY6184490_CGGTTGGG_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184491_GTCCGTGA_L004_17480_1 lane4_3600STDY6184492_GCCGAACC_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184493_ACTTTACT_L004_17480_1 lane4_3600STDY6184494_GGGTCCAT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184495_ATAACTAG_L004_17480_1 lane4_3600STDY6184496_AATAGAGA_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184497_TCACCATT_L004_17480_1 lane4_3600STDY6184498_CGCCTGAT_L004_17480_1 
#>                                      "0341"                                     "02222" 
#> lane4_3600STDY6184499_GCGTGAAC_L004_17480_1 lane4_3600STDY6184500_TAAGGGTG_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184501_GGTGTCGA_L004_17480_1 lane4_3600STDY6184502_CCGTTAGG_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184503_TGGCAAAA_L004_17480_1 lane4_3600STDY6184504_CCTACCCG_L004_17480_1 
#>                                      "0213"                                     "02222" 
#> lane4_3600STDY6184505_AACAGCGC_L004_17480_1 lane4_3600STDY6184506_TATACATC_L004_17480_1 
#>                                      "0213"                                      "0341" 
#> lane4_3600STDY6184507_AAGCGACT_L004_17480_1 lane4_3600STDY6184508_GAAGCGCA_L004_17480_1 
#>                                      "0211"                                     "02221" 
#> lane4_3600STDY6184509_ACCTCTAC_L004_17480_1 lane4_3600STDY6184510_GATTGCGT_L004_17480_1 
#>                                     "02221"                                      "0232" 
#> lane4_3600STDY6184511_GCTGGTTG_L004_17480_1 lane4_3600STDY6184512_ATCGTCCT_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184513_GGACACGG_L004_17480_1 lane4_3600STDY6184514_CGCACCTA_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184515_CTTCGGCT_L004_17480_1 lane4_3600STDY6184516_CGAATCGA_L004_17480_1 
#>                                      "0212"                                       "032" 
#> lane4_3600STDY6184517_TAACAACT_L004_17480_1 lane4_3600STDY6184518_AGCTCTTT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184519_TAATCCCT_L004_17480_1 lane4_3600STDY6184520_AGGACACT_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184521_TTACACTA_L004_17480_1 lane4_3600STDY6184522_AAACATCA_L004_17480_1 
#>                                      "0341"                                      "0213" 
#> lane4_3600STDY6184523_CCATAGCT_L004_17480_1 lane4_3600STDY6184524_GTTATGGC_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184525_ATCCCCTA_L004_17480_1 lane4_3600STDY6184526_CATACTAC_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184527_CAATTGTT_L004_17480_1 lane4_3600STDY6184528_AAACCCGT_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184529_CAGATTTC_L004_17480_1 lane4_3600STDY6184530_GCGTAGGT_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184531_GGCATTCG_L004_17480_1 lane4_3600STDY6184532_TGGGGCTT_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184533_CTGACTAC_L004_17480_1 lane4_3600STDY6184534_AACTTTTA_L004_17480_1 
#>                                      "0212"                                      "0211" 
#> lane4_3600STDY6184535_AGGGATTC_L004_17480_1 lane4_3600STDY6184536_CCGAGTAG_L004_17480_1 
#>                                      "0221"                                      "0212" 
#> lane4_3600STDY6184537_GGGGACTA_L004_17480_1 lane4_3600STDY6184538_GGAGTTGA_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184539_AGCTCATC_L004_17480_1 lane4_3600STDY6184540_TAATCAAC_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184541_ACTGGTCG_L004_17480_1 lane4_3600STDY6184542_GACGATTG_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184543_AGCGATGA_L004_17480_1 lane4_3600STDY6184544_GAAGAGAT_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184545_CGTATGCA_L004_17480_1 lane4_3600STDY6184546_CACGTGCG_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184547_GCTTAAAC_L004_17480_1 lane4_3600STDY6184548_GTTCCGCA_L004_17480_1 
#>                                       "032"                                      "0221" 
#> lane4_3600STDY6184549_GTATCGTC_L004_17480_1 lane4_3600STDY6184550_GTCCTCAC_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184551_GTACGGAC_L004_17480_1 lane4_3600STDY6184552_CATTTTGC_L004_17480_1 
#>                                      "0221"                                      "0221" 
#> lane4_3600STDY6184553_TCCTCTCT_L004_17480_1 lane4_3600STDY6184554_AGCAACGA_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184555_ACAGAAGA_L004_17480_1 lane4_3600STDY6184556_CGACCCTT_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184557_CTGCCTAG_L004_17480_1 lane4_3600STDY6184558_GAGCGCAT_L004_17480_1 
#>                                      "0212"                                     "02221" 
#> lane4_3600STDY6184559_AACTTATC_L004_17480_1 lane4_3600STDY6184560_CCGATGTA_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184561_TTACTACC_L004_17480_1 lane4_3600STDY6184562_CAAGGAGC_L004_17480_1 
#>                                      "0341"                                      "0221" 
#> lane4_3600STDY6184563_TGGTTGAC_L004_17480_1 lane4_3600STDY6184564_ACCTGCTG_L004_17480_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6183797_ATCACGTT_L001_17592_1 lane1_3600STDY6183798_CGATGTTT_L001_17592_1 
#>                                      "0221"                                      "0312" 
#> lane1_3600STDY6183799_TTAGGCAT_L001_17592_1 lane1_3600STDY6183800_TGACCACT_L001_17592_1 
#>                                      "0312"                                      "0312" 
#> lane1_3600STDY6183801_ACAGTGGT_L001_17592_1 lane1_3600STDY6183802_GCCAATGT_L001_17592_1 
#>                                      "0312"                                      "0312" 
#> lane1_3600STDY6183803_CAGATCTG_L001_17592_1 lane1_3600STDY6183804_ACTTGATG_L001_17592_1 
#>                                      "0312"                                      "0311" 
#> lane1_3600STDY6183805_GATCAGCG_L001_17592_1 lane1_3600STDY6183806_TAGCTTGT_L001_17592_1 
#>                                      "0312"                                      "0312" 
#> lane1_3600STDY6183807_GGCTACAG_L001_17592_1 lane1_3600STDY6183808_CTTGTACT_L001_17592_1 
#>                                      "0312"                                      "0223" 
#> lane1_3600STDY6183809_TGGTTGTT_L001_17592_1 lane1_3600STDY6183810_TCTCGGTT_L001_17592_1 
#>                                      "0311"                                      "0221" 
#> lane1_3600STDY6183811_TAAGCGTT_L001_17592_1 lane1_3600STDY6183812_TCCGTCTT_L001_17592_1 
#>                                      "0312"                                      "0313" 
#> lane1_3600STDY6183813_TGTACCTT_L001_17592_1 lane1_3600STDY6183814_TTCTGTGT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183815_TCTGCTGT_L001_17592_1 lane1_3600STDY6183816_TTGGAGGT_L001_17592_1 
#>                                       "033"                                      "0221" 
#> lane1_3600STDY6183817_TCGAGCGT_L001_17592_1 lane1_3600STDY6183818_TGATACGT_L001_17592_1 
#>                                      "0311"                                      "0311" 
#> lane1_3600STDY6183819_TGCATAGT_L001_17592_1 lane1_3600STDY6183820_TTGACTCT_L001_17592_1 
#>                                      "0313"                                      "0221" 
#> lane1_3600STDY6183821_TGCGATCT_L001_17592_1 lane1_3600STDY6183822_TTCCTGCT_L001_17592_1 
#>                                      "0312"                                       "033" 
#> lane1_3600STDY6183823_TAGTGACT_L001_17592_1 lane1_3600STDY6183824_TACAGGAT_L001_17592_1 
#>                                      "0312"                                      "0312" 
#> lane1_3600STDY6183825_TCCTCAAT_L001_17592_1 lane1_3600STDY6183826_TGTGGTTG_L001_17592_1 
#>                                      "0312"                                      "0312" 
#> lane1_3600STDY6183827_TAGTCTTG_L001_17592_1 lane1_3600STDY6183828_TTCCATTG_L001_17592_1 
#>                                      "0312"                                      "0312" 
#> lane1_3600STDY6183829_TCGAAGTG_L001_17592_1 lane1_3600STDY6183830_TAACGCTG_L001_17592_1 
#>                                      "0312"                                      "0312" 
#> lane1_3600STDY6183831_TTGGTATG_L001_17592_1 lane1_3600STDY6183832_TGAACTGG_L001_17592_1 
#>                                      "0312"                                      "0312" 
#> lane1_3600STDY6183833_TACTTCGG_L001_17592_1 lane1_3600STDY6183834_TCTCACGG_L001_17592_1 
#>                                      "0311"                                      "0312" 
#> lane1_3600STDY6183835_TCAGGAGG_L001_17592_1 lane1_3600STDY6183836_TAAGTTCG_L001_17592_1 
#>                                      "0313"                                      "0311" 
#> lane1_3600STDY6183837_TCCAGTCG_L001_17592_1 lane1_3600STDY6183838_TGTATGCG_L001_17592_1 
#>                                      "0311"                                       "033" 
#> lane1_3600STDY6183839_TCATTGAG_L001_17592_1 lane1_3600STDY6183840_TGGCTCAG_L001_17592_1 
#>                                      "0231"                                       "033" 
#> lane1_3600STDY6183841_TATGCCAG_L001_17592_1 lane1_3600STDY6183842_TCAGATTC_L001_17592_1 
#>                                      "0231"                                      "0311" 
#> lane1_3600STDY6183843_TACTAGTC_L001_17592_1 lane1_3600STDY6183844_TTCAGCTC_L001_17592_1 
#>                                      "0313"                                      "0313" 
#> lane1_3600STDY6183845_TGTCTATC_L001_17592_1 lane1_3600STDY6183846_TATGTGGC_L001_17592_1 
#>                                      "0312"                                      "0312" 
#> lane1_3600STDY6183847_TTACTCGC_L001_17592_1 lane1_3600STDY6183848_TCGTTAGC_L001_17592_1 
#>                                       "033"                                      "0311" 
#> lane1_3600STDY6183849_TACCGAGC_L001_17592_1 lane1_3600STDY6183850_TGTTCTCC_L001_17592_1 
#>                                      "0312"                                      "0311" 
#> lane1_3600STDY6183851_TTCGCACC_L001_17592_1 lane1_3600STDY6183852_TTGCGTAC_L001_17592_1 
#>                                      "0312"                                      "0312" 
#> lane1_3600STDY6183853_TCTACGAC_L001_17592_1 lane1_3600STDY6183854_TGACAGAC_L001_17592_1 
#>                                      "0311"                                      "0312" 
#> lane1_3600STDY6183855_TAGAACAC_L001_17592_1 lane1_3600STDY6183856_TCATCCTA_L001_17592_1 
#>                                      "0311"                                      "0312" 
#> lane1_3600STDY6183857_TGCTGATA_L001_17592_1 lane1_3600STDY6183858_TAGACGGA_L001_17592_1 
#>                                      "0232"                                       "033" 
#> lane1_3600STDY6183859_TGTGAAGA_L001_17592_1 lane1_3600STDY6183860_TCTCTTCA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183861_TTGTTCCA_L001_17592_1 lane1_3600STDY6183862_TGAAGCCA_L001_17592_1 
#>                                      "0311"                                       "033" 
#> lane1_3600STDY6183863_TACCACCA_L001_17592_1 lane1_3600STDY6183864_TGCGTGAA_L001_17592_1 
#>                                       "033"                                      "0232" 
#> lane1_3600STDY6183865_GGTGAGTT_L001_17592_1 lane1_3600STDY6183866_GATCTCTT_L001_17592_1 
#>                                      "0231"                                      "0311" 
#> lane1_3600STDY6183867_GTGTCCTT_L001_17592_1 lane1_3600STDY6183868_GACGGATT_L001_17592_1 
#>                                      "0313"                                       "033" 
#> lane1_3600STDY6183869_GCAACATT_L001_17592_1 lane1_3600STDY6183870_GGTCGTGT_L001_17592_1 
#>                                      "0312"                                      "0311" 
#> lane1_3600STDY6183871_GAATCTGT_L001_17592_1 lane1_3600STDY6183872_GTACATCT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183873_GAGGTGCT_L001_17592_1 lane1_3600STDY6183874_GCATGGCT_L001_17592_1 
#>                                      "0311"                                      "0231" 
#> lane1_3600STDY6183875_GTTAGCCT_L001_17592_1 lane1_3600STDY6183876_GTCGCTAT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183877_GGAATGAT_L001_17592_1 lane1_3600STDY6183878_GAGCCAAT_L001_17592_1 
#>                                      "0313"                                      "0312" 
#> lane1_3600STDY6183879_GCTCCTTG_L001_17592_1 lane1_3600STDY6183880_GTAAGGTG_L001_17592_1 
#>                                       "033"                                      "0311" 
#> lane1_3600STDY6183881_GAGGATGG_L001_17592_1 lane1_3600STDY6183882_GTTGTCGG_L001_17592_1 
#>                                      "0232"                                      "0231" 
#> lane1_3600STDY6183883_GGATTAGG_L001_17592_1 lane1_3600STDY6183884_GATAGAGG_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6183885_GTGTGTCG_L001_17592_1 lane1_3600STDY6183886_GCAATCCG_L001_17592_1 
#>                                      "0232"                                     "02221" 
#> lane1_3600STDY6183887_GACCTTAG_L001_17592_1 lane1_3600STDY6183888_GCCTGTTC_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6183889_GCACTGTC_L001_17592_1 lane1_3600STDY6183890_GCTAACTC_L001_17592_1 
#>                                      "0232"                                       "033" 
#> lane1_3600STDY6183891_GATTCATC_L001_17592_1 lane1_3600STDY6183892_GTCTTGGC_L001_17592_1 
#>                                      "0231"                                       "033" 
#> lane1_3600STDY6183893_GTAGAAGC_L001_17592_1 lane1_3600STDY6183894_GATGGTCC_L001_17592_1 
#>                                      "0312"                                      "0311" 
#> lane1_3600STDY6183895_GTGCTACC_L001_17592_1 lane1_3600STDY6183896_GCGATTAC_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183897_GGTTGGAC_L001_17592_1 lane1_3600STDY6183898_GGCACAAC_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6183899_GACACTTA_L001_17592_1 lane1_3600STDY6183900_GTGCAGTA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183901_GGAGTCTA_L001_17592_1 lane1_3600STDY6183902_GCTATGGA_L001_17592_1 
#>                                      "0311"                                      "0311" 
#> lane1_3600STDY6183903_GAGTGCGA_L001_17592_1 lane1_3600STDY6183904_GTAACCGA_L001_17592_1 
#>                                       "033"                                      "0311" 
#> lane1_3600STDY6183905_GGCAAGCA_L001_17592_1 lane1_3600STDY6183906_GCCTTACA_L001_17592_1 
#>                                      "0232"                                       "033" 
#> lane1_3600STDY6183907_GAACGACA_L001_17592_1 lane1_3600STDY6183908_GCAGGTAA_L001_17592_1 
#>                                       "033"                                      "0232" 
#> lane1_3600STDY6183909_GCGTCGAA_L001_17592_1 lane1_3600STDY6183910_CGTTCGGT_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6183911_CACCAGGT_L001_17592_1 lane1_3600STDY6183912_CTGCGAGT_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6183913_CCGTATCT_L001_17592_1 lane1_3600STDY6183914_CGCTTCCT_L001_17592_1 
#>                                      "0232"                                      "0231" 
#> lane1_3600STDY6183915_CAAGACCT_L001_17592_1 lane1_3600STDY6183916_CACACACT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183917_CCTAGTAT_L001_17592_1 lane1_3600STDY6183918_CCACCGAT_L001_17592_1 
#>                                      "0312"                                      "0312" 
#> lane1_3600STDY6183919_CTTCACAT_L001_17592_1 lane1_3600STDY6183920_CTATCATG_L001_17592_1 
#>                                       "033"                                      "0312" 
#> lane1_3600STDY6183921_CATGAATG_L001_17592_1 lane1_3600STDY6183922_CCACTTGG_L001_17592_1 
#>                                      "0311"                                       "033" 
#> lane1_3600STDY6183923_CTGTACGG_L001_17592_1 lane1_3600STDY6183924_CTAGATAG_L001_17592_1 
#>                                      "0311"                                       "033" 
#> lane1_3600STDY6183925_CACTCGAG_L001_17592_1 lane1_3600STDY6183926_CCGACAAG_L001_17592_1 
#>                                      "0311"                                      "0312" 
#> lane1_3600STDY6183927_CTTGCTTC_L001_17592_1 lane1_3600STDY6183928_CATAGGTC_L001_17592_1 
#>                                      "0232"                                      "0212" 
#> lane1_3600STDY6183929_CACATTGC_L001_17592_1 lane1_3600STDY6183930_CGCTAAGC_L001_17592_1 
#>                                      "0232"                                       "033" 
#> lane1_3600STDY6183931_CAACCTCC_L001_17592_1 lane1_3600STDY6183932_CAGCTGAC_L001_17592_1 
#>                                       "033"                                      "0232" 
#> lane1_3600STDY6183933_CTCAAGAC_L001_17592_1 lane1_3600STDY6183934_CGTGTCAC_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6183935_CCATGCAC_L001_17592_1 lane1_3600STDY6183936_CGTTACTA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183937_CAAGTAGA_L001_17592_1 lane1_3600STDY6183938_CTCTCTCA_L001_17592_1 
#>                                       "033"                                      "0313" 
#> lane1_3600STDY6183939_CGACTGCA_L001_17592_1 lane1_3600STDY6183940_CCTGAGCA_L001_17592_1 
#>                                       "033"                                      "0313" 
#> lane1_3600STDY6183941_CAGGCTAA_L001_17592_1 lane1_3600STDY6183942_CGGAGGAA_L001_17592_1 
#>                                      "0312"                                       "033" 
#> lane1_3600STDY6183943_AGGAGATT_L001_17592_1 lane1_3600STDY6183944_AGGCAGCT_L001_17592_1 
#>                                      "0311"                                      "0213" 
#> lane1_3600STDY6183945_ACGTTCAT_L001_17592_1 lane1_3600STDY6183946_AACGTGTG_L001_17592_1 
#>                                       "033"                                      "0312" 
#> lane1_3600STDY6183947_AGACCGTG_L001_17592_1 lane1_3600STDY6183948_ACCTCTGG_L001_17592_1 
#>                                      "0312"                                      "0311" 
#> lane1_3600STDY6183949_ATCCTAGG_L001_17592_1 lane1_3600STDY6183950_ATCAACCG_L001_17592_1 
#>                                      "0313"                                      "0312" 
#> lane1_3600STDY6183951_AGGTCACG_L001_17592_1 lane1_3600STDY6183952_ACTGTTAG_L001_17592_1 
#>                                      "0311"                                      "0221" 
#> lane1_3600STDY6183953_AAGAGTAG_L001_17592_1 lane1_3600STDY6183954_ATTCGGAG_L001_17592_1 
#>                                      "0231"                                      "0313" 
#> lane1_3600STDY6183955_ACGCAATC_L001_17592_1 lane1_3600STDY6183956_ACAAGTGC_L001_17592_1 
#>                                       "033"                                      "0232" 
#> lane1_3600STDY6183957_ATGGATCC_L001_17592_1 lane1_3600STDY6183958_AGAGGACC_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6183959_ATCTCCAC_L001_17592_1 lane1_3600STDY6183960_ATTGGCTA_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6183961_AATCCTGA_L001_17592_1 lane1_3600STDY6183962_AGGATTCA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183963_AACTGGCA_L001_17592_1 lane1_3600STDY6183964_ACAACGCA_L001_17592_1 
#>                                       "033"                                      "0223" 
#> lane1_3600STDY6183965_CGGAAACA_L001_17592_1 lane1_3600STDY6183966_AATGAATT_L001_17592_1 
#>                                     "02222"                                       "033" 
#> lane1_3600STDY6183967_TAGGACCC_L001_17592_1 lane1_3600STDY6183968_TCTCAGTG_L001_17592_1 
#>                                      "0311"                                       "033" 
#> lane1_3600STDY6183969_CATGGGAA_L001_17592_1 lane1_3600STDY6183970_CCTAAGAT_L001_17592_1 
#>                                      "0311"                                      "0232" 
#> lane1_3600STDY6183971_CTCAGATA_L001_17592_1 lane1_3600STDY6183972_CCCATAGG_L001_17592_1 
#>                                      "0311"                                       "033" 
#> lane1_3600STDY6183973_GCTATGAC_L001_17592_1 lane1_3600STDY6183974_GCTGTGAA_L001_17592_1 
#>                                      "0311"                                      "0311" 
#> lane1_3600STDY6183975_ACCTTCAA_L001_17592_1 lane1_3600STDY6183976_ACAAAGCC_L001_17592_1 
#>                                      "0231"                                      "0211" 
#> lane1_3600STDY6183977_CAAAACCG_L001_17592_1 lane1_3600STDY6183978_GCTGGACA_L001_17592_1 
#>                                      "0232"                                      "0231" 
#> lane1_3600STDY6183979_AAGTCGTA_L001_17592_1 lane1_3600STDY6183980_CATCCGTA_L001_17592_1 
#>                                      "0232"                                      "0231" 
#> lane1_3600STDY6183981_TTGTGTCT_L001_17592_1 lane1_3600STDY6183982_TGCTCTAG_L001_17592_1 
#>                                      "0231"                                      "0232" 
#> lane1_3600STDY6183983_ACCCAACA_L001_17592_1 lane1_3600STDY6183984_CGATCTGA_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6183985_GTTCCACG_L001_17592_1 lane1_3600STDY6183986_ACTCTTTC_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6183987_TATTGGAG_L001_17592_1 lane1_3600STDY6183988_TAAACATA_L001_17592_1 
#>                                      "0231"                                      "0221" 
#> lane1_3600STDY6183989_GTAAGATA_L001_17592_1 lane1_3600STDY6183990_TACCGCAA_L001_17592_1 
#>                                      "0221"                                      "0312" 
#> lane1_3600STDY6183991_TATCTCCT_L001_17592_1 lane1_3600STDY6183992_TGTCATCT_L001_17592_1 
#>                                      "0311"                                      "0231" 
#> lane1_3600STDY6183993_ATAGCTCT_L001_17592_1 lane1_3600STDY6183994_AGTCCAAC_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6183995_TTTGGGCA_L001_17592_1 lane1_3600STDY6183996_TCTGACGC_L001_17592_1 
#>                                      "0311"                                      "0231" 
#> lane1_3600STDY6183997_TGTCGACT_L001_17592_1 lane1_3600STDY6183998_GTCACGTA_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6183999_TTGAGCGA_L001_17592_1 lane1_3600STDY6184000_GAGACATA_L001_17592_1 
#>                                      "0231"                                      "0313" 
#> lane1_3600STDY6184001_GTCAAGCT_L001_17592_1 lane1_3600STDY6184002_AGCAAGTT_L001_17592_1 
#>                                      "0221"                                      "0312" 
#> lane1_3600STDY6184003_GACGCTCA_L001_17592_1 lane1_3600STDY6184004_ACGGCAGC_L001_17592_1 
#>                                      "0313"                                      "0312" 
#> lane1_3600STDY6184005_AGAACTGA_L001_17592_1 lane1_3600STDY6184006_CGCCTTTG_L001_17592_1 
#>                                      "0313"                                      "0311" 
#> lane1_3600STDY6184007_TAAGGTCA_L001_17592_1 lane1_3600STDY6184008_ACGTTGGC_L001_17592_1 
#>                                       "033"                                      "0311" 
#> lane1_3600STDY6184009_CCAGCTTA_L001_17592_1 lane1_3600STDY6184010_GAATCCTA_L001_17592_1 
#>                                      "0311"                                      "0311" 
#> lane1_3600STDY6184011_ACTTCGTA_L001_17592_1 lane1_3600STDY6184012_TAGTCGGT_L001_17592_1 
#>                                      "0223"                                      "0313" 
#> lane1_3600STDY6184013_CGCACGAG_L001_17592_1 lane1_3600STDY6184014_ACGTACTA_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6184015_AGCGCCAA_L001_17592_1 lane1_3600STDY6184016_GCCTGCCC_L001_17592_1 
#>                                      "0311"                                      "0231" 
#> lane1_3600STDY6184017_AGGACGAT_L001_17592_1 lane1_3600STDY6184018_CTTGACCG_L001_17592_1 
#>                                      "0311"                                      "0231" 
#> lane1_3600STDY6184019_AGGTCTAA_L001_17592_1 lane1_3600STDY6184020_CGAGATCC_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6184021_ATTAGCGG_L001_17592_1 lane1_3600STDY6184022_GCGCTGAT_L001_17592_1 
#>                                      "0311"                                      "0231" 
#> lane1_3600STDY6184023_TGCTGAAC_L001_17592_1 lane1_3600STDY6184024_GAGGGCAG_L001_17592_1 
#>                                      "0221"                                      "0313" 
#> lane1_3600STDY6184025_GTTTTCAC_L001_17592_1 lane1_3600STDY6184026_GAGATGCC_L001_17592_1 
#>                                      "0313"                                      "0311" 
#> lane1_3600STDY6184027_TTGAGAAG_L001_17592_1 lane1_3600STDY6184028_GCATCCGG_L001_17592_1 
#>                                      "0313"                                      "0311" 
#> lane1_3600STDY6184029_GTCACCAG_L001_17592_1 lane1_3600STDY6184030_GAGGTCGC_L001_17592_1 
#>                                      "0313"                                       "033" 
#> lane1_3600STDY6184031_AAGGGGTA_L001_17592_1 lane1_3600STDY6184032_TTTTACGT_L001_17592_1 
#>                                       "033"                                      "0311" 
#> lane1_3600STDY6184033_TTCCTACA_L001_17592_1 lane1_3600STDY6184034_AGTGTAGT_L001_17592_1 
#>                                      "0311"                                      "0231" 
#> lane1_3600STDY6184035_GTGGCCAA_L001_17592_1 lane1_3600STDY6184036_AAATACTC_L001_17592_1 
#>                                      "0311"                                      "0312" 
#> lane1_3600STDY6184037_CACCCGTC_L001_17592_1 lane1_3600STDY6184038_TCGTGGTT_L001_17592_1 
#>                                      "0311"                                       "033" 
#> lane1_3600STDY6184039_ACTTGGGG_L001_17592_1 lane1_3600STDY6184040_GGCTGCTT_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6184041_CAGGGTCG_L001_17592_1 lane1_3600STDY6184042_CTCGTCGA_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6184043_TCTACAGT_L001_17592_1 lane1_3600STDY6184044_CTTCTAGA_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6184045_AACGGCTT_L001_17592_1 lane1_3600STDY6184046_ATAAGACT_L001_17592_1 
#>                                      "0311"                                      "0231" 
#> lane1_3600STDY6184047_GTTTTTCG_L001_17592_1 lane1_3600STDY6184048_ATTGGTAT_L001_17592_1 
#>                                      "0231"                                      "0311" 
#> lane1_3600STDY6184049_CGCCAGTA_L001_17592_1 lane1_3600STDY6184050_AAGCCGAA_L001_17592_1 
#>                                      "0311"                                      "0311" 
#> lane1_3600STDY6184051_TGACCCAC_L001_17592_1 lane1_3600STDY6184052_ATTGCACA_L001_17592_1 
#>                                      "0231"                                      "0311" 
#> lane1_3600STDY6184053_CTTTTGAT_L001_17592_1 lane1_3600STDY6184054_TAGCGAGA_L001_17592_1 
#>                                      "0313"                                       "033" 
#> lane1_3600STDY6184055_TTCGCAGG_L001_17592_1 lane1_3600STDY6184056_TAGTTATT_L001_17592_1 
#>                                      "0311"                                       "033" 
#> lane1_3600STDY6184057_TCCTCCGA_L001_17592_1 lane1_3600STDY6184058_GCGGGTCT_L001_17592_1 
#>                                      "0313"                                      "0231" 
#> lane1_3600STDY6184059_GATTCTAT_L001_17592_1 lane1_3600STDY6184060_ATGCAAAG_L001_17592_1 
#>                                      "0311"                                      "0313" 
#> lane1_3600STDY6184061_GTCTGAGG_L001_17592_1 lane1_3600STDY6184062_TCTGGCGA_L001_17592_1 
#>                                      "0231"                                      "0232" 
#> lane1_3600STDY6184063_AATTTGCG_L001_17592_1 lane1_3600STDY6184064_TGGGTTGG_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6184065_AGTTGAAA_L001_17592_1 lane1_3600STDY6184066_GACCGGAA_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6184067_GATCGAAC_L001_17592_1 lane1_3600STDY6184068_GTATAGGG_L001_17592_1 
#>                                     "02221"                                     "02221" 
#> lane1_3600STDY6184069_GGTAAGAG_L001_17592_1 lane1_3600STDY6184070_AGTCCGAT_L001_17592_1 
#>                                     "03422"                                      "0232" 
#> lane1_3600STDY6184071_ATACAGGC_L001_17592_1 lane1_3600STDY6184072_TGAGACTC_L001_17592_1 
#>                                      "0232"                                       "033" 
#> lane1_3600STDY6184073_ACTCAGGA_L001_17592_1 lane1_3600STDY6184074_GTGTCTGA_L001_17592_1 
#>                                       "033"                                      "0313" 
#> lane1_3600STDY6184075_CTTGAATC_L001_17592_1 lane1_3600STDY6184076_CCGCATGA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184077_AAGTAACA_L001_17592_1 lane1_3600STDY6184078_GTGGTACT_L001_17592_1 
#>                                       "033"                                      "0232" 
#> lane1_3600STDY6184079_AGCTGTGC_L001_17592_1 lane1_3600STDY6184080_TTACCTTC_L001_17592_1 
#>                                     "02221"                                       "033" 
#> lane1_3600STDY6184081_TCCGGGTA_L001_17592_1 lane1_3600STDY6184082_CTACGTAA_L001_17592_1 
#>                                      "0231"                                      "0232" 
#> lane1_3600STDY6184083_TCGGACCG_L001_17592_1 lane1_3600STDY6184084_ATGCGTCG_L001_17592_1 
#>                                       "033"                                      "0313" 
#> lane1_3600STDY6184085_TTCTTAGC_L001_17592_1 lane1_3600STDY6184086_TGAGTAAG_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6184087_AAGTGATA_L001_17592_1 lane1_3600STDY6184088_TCGATGCG_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6184089_TATTCTGG_L001_17592_1 lane1_3600STDY6184090_AGCCGTGA_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6184091_AAGCCTTC_L001_17592_1 lane1_3600STDY6184092_AGGTATCC_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6184093_AGGATCTC_L001_17592_1 lane1_3600STDY6184094_CTGTTTGA_L001_17592_1 
#>                                       "033"                                      "0232" 
#> lane1_3600STDY6184095_GGAATTTC_L001_17592_1 lane1_3600STDY6184096_TTGGAGCA_L001_17592_1 
#>                                      "0231"                                      "0313" 
#> lane1_3600STDY6184097_AAGGTCTG_L001_17592_1 lane1_3600STDY6184098_AATTAGGC_L001_17592_1 
#>                                      "0311"                                       "033" 
#> lane1_3600STDY6184099_AATCGGGT_L001_17592_1 lane1_3600STDY6184100_AGGTAGAC_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184101_CTTATTCC_L001_17592_1 lane1_3600STDY6184102_CAGGCTCT_L001_17592_1 
#>                                       "033"                                      "0232" 
#> lane1_3600STDY6184103_AAAGCACG_L001_17592_1 lane1_3600STDY6184104_GTATACAC_L001_17592_1 
#>                                      "0232"                                      "0231" 
#> lane1_3600STDY6184105_GGACATAT_L001_17592_1 lane1_3600STDY6184106_CGGTTGGG_L001_17592_1 
#>                                     "02221"                                      "0231" 
#> lane1_3600STDY6184107_GTCCGTGA_L001_17592_1 lane1_3600STDY6184108_GCCGAACC_L001_17592_1 
#>                                       "033"                                      "0313" 
#> lane1_3600STDY6184109_ACTTTACT_L001_17592_1 lane1_3600STDY6184110_GGGTCCAT_L001_17592_1 
#>                                       "033"                                      "0311" 
#> lane1_3600STDY6184111_ATAACTAG_L001_17592_1 lane1_3600STDY6184112_AATAGAGA_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6184113_TCACCATT_L001_17592_1 lane1_3600STDY6184114_CGCCTGAT_L001_17592_1 
#>                                      "0231"                                      "0232" 
#> lane1_3600STDY6184115_GCGTGAAC_L001_17592_1 lane1_3600STDY6184116_TAAGGGTG_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6184117_GGTGTCGA_L001_17592_1 lane1_3600STDY6184118_CCGTTAGG_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184119_TGGCAAAA_L001_17592_1 lane1_3600STDY6184120_CCTACCCG_L001_17592_1 
#>                                      "0231"                                      "0313" 
#> lane1_3600STDY6184121_AACAGCGC_L001_17592_1 lane1_3600STDY6184122_TATACATC_L001_17592_1 
#>                                      "0311"                                      "0313" 
#> lane1_3600STDY6184123_AAGCGACT_L001_17592_1 lane1_3600STDY6184124_GAAGCGCA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184125_ACCTCTAC_L001_17592_1 lane1_3600STDY6184126_GATTGCGT_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6184127_GCTGGTTG_L001_17592_1 lane1_3600STDY6184128_ATCGTCCT_L001_17592_1 
#>                                       "033"                                      "0312" 
#> lane1_3600STDY6184129_GGACACGG_L001_17592_1 lane1_3600STDY6184130_CGCACCTA_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6184131_CTTCGGCT_L001_17592_1 lane1_3600STDY6184132_CGAATCGA_L001_17592_1 
#>                                      "0313"                                     "02222" 
#> lane1_3600STDY6184133_TAACAACT_L001_17592_1 lane1_3600STDY6184134_AGCTCTTT_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6184135_TAATCCCT_L001_17592_1 lane1_3600STDY6184136_AGGACACT_L001_17592_1 
#>                                      "0231"                                      "0232" 
#> lane1_3600STDY6184137_TTACACTA_L001_17592_1 lane1_3600STDY6184138_AAACATCA_L001_17592_1 
#>                                       "033"                                      "0232" 
#> lane1_3600STDY6184139_CCATAGCT_L001_17592_1 lane1_3600STDY6184140_GTTATGGC_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6184141_ATCCCCTA_L001_17592_1 lane1_3600STDY6184142_CATACTAC_L001_17592_1 
#>                                      "0232"                                       "033" 
#> lane1_3600STDY6184143_CAATTGTT_L001_17592_1 lane1_3600STDY6184144_AAACCCGT_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6184145_CAGATTTC_L001_17592_1 lane1_3600STDY6184146_GCGTAGGT_L001_17592_1 
#>                                      "0311"                                      "0311" 
#> lane1_3600STDY6184147_GGCATTCG_L001_17592_1 lane1_3600STDY6184148_TGGGGCTT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184149_CTGACTAC_L001_17592_1 lane1_3600STDY6184150_AACTTTTA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184151_AGGGATTC_L001_17592_1 lane1_3600STDY6184152_CCGAGTAG_L001_17592_1 
#>                                      "0231"                                       "033" 
#> lane1_3600STDY6184153_GGGGACTA_L001_17592_1 lane1_3600STDY6184154_GGAGTTGA_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6184155_AGCTCATC_L001_17592_1 lane1_3600STDY6184156_TAATCAAC_L001_17592_1 
#>                                      "0311"                                      "0221" 
#> lane1_3600STDY6184157_ACTGGTCG_L001_17592_1 lane1_3600STDY6184158_GACGATTG_L001_17592_1 
#>                                      "0313"                                      "0231" 
#> lane1_3600STDY6184159_AGCGATGA_L001_17592_1 lane1_3600STDY6184160_GAAGAGAT_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6184161_CGTATGCA_L001_17592_1 lane1_3600STDY6184162_CACGTGCG_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184163_GCTTAAAC_L001_17592_1 lane1_3600STDY6184164_GTTCCGCA_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6184165_GTATCGTC_L001_17592_1 lane1_3600STDY6184166_GTCCTCAC_L001_17592_1 
#>                                       "033"                                      "0311" 
#> lane1_3600STDY6184167_GTACGGAC_L001_17592_1 lane1_3600STDY6184168_CATTTTGC_L001_17592_1 
#>                                      "0231"                                      "0311" 
#> lane1_3600STDY6184169_TCCTCTCT_L001_17592_1 lane1_3600STDY6184170_AGCAACGA_L001_17592_1 
#>                                      "0341"                                      "0231" 
#> lane1_3600STDY6184171_ACAGAAGA_L001_17592_1 lane1_3600STDY6184172_CGACCCTT_L001_17592_1 
#>                                      "0311"                                       "033" 
#> lane1_3600STDY6184173_CTGCCTAG_L001_17592_1 lane1_3600STDY6184174_GAGCGCAT_L001_17592_1 
#>                                      "0311"                                       "033" 
#> lane1_3600STDY6184175_AACTTATC_L001_17592_1 lane1_3600STDY6184176_CCGATGTA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184177_TTACTACC_L001_17592_1 lane1_3600STDY6184178_CAAGGAGC_L001_17592_1 
#>                                      "0313"                                      "0311" 
#> lane1_3600STDY6184179_TGGTTGAC_L001_17592_1 lane1_3600STDY6184180_ACCTGCTG_L001_17592_1 
#>                                      "0313"                                      "0221"

show/hide code output

get_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 981))
#> lane1_3600STDY6077864_ATCACGTT_L001_15986_1 lane1_3600STDY6077865_CGATGTTT_L001_15986_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6077866_TTAGGCAT_L001_15986_1 lane1_3600STDY6077867_TGACCACT_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077868_ACAGTGGT_L001_15986_1 lane1_3600STDY6077869_GCCAATGT_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077870_CAGATCTG_L001_15986_1 lane1_3600STDY6077871_ACTTGATG_L001_15986_1 
#>                                     "01212"                                     "01211" 
#> lane1_3600STDY6077872_GATCAGCG_L001_15986_1 lane1_3600STDY6077873_TAGCTTGT_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077874_GGCTACAG_L001_15986_1 lane1_3600STDY6077875_CTTGTACT_L001_15986_1 
#>                                     "01211"                                     "01212" 
#> lane1_3600STDY6077876_TGGTTGTT_L001_15986_1 lane1_3600STDY6077877_TCTCGGTT_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077878_TAAGCGTT_L001_15986_1 lane1_3600STDY6077879_TCCGTCTT_L001_15986_1 
#>                                     "01211"                                     "01212" 
#> lane1_3600STDY6077880_TGTACCTT_L001_15986_1 lane1_3600STDY6077881_TTCTGTGT_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077882_TCTGCTGT_L001_15986_1 lane1_3600STDY6077883_TTGGAGGT_L001_15986_1 
#>                                     "01211"                                      "0221" 
#> lane1_3600STDY6077884_TCGAGCGT_L001_15986_1 lane1_3600STDY6077885_TGATACGT_L001_15986_1 
#>                                     "01212"                                     "01212" 
#> lane1_3600STDY6077886_TGCATAGT_L001_15986_1 lane1_3600STDY6077887_TTGACTCT_L001_15986_1 
#>                                     "01212"                                     "01212" 
#> lane1_3600STDY6077888_TGCGATCT_L001_15986_1 lane1_3600STDY6077889_TTCCTGCT_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077890_TAGTGACT_L001_15986_1 lane1_3600STDY6077891_TACAGGAT_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077892_TCCTCAAT_L001_15986_1 lane1_3600STDY6077893_TGTGGTTG_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077894_TAGTCTTG_L001_15986_1 lane1_3600STDY6077895_TTCCATTG_L001_15986_1 
#>                                     "01211"                                     "01212" 
#> lane1_3600STDY6077896_TCGAAGTG_L001_15986_1 lane1_3600STDY6077897_TAACGCTG_L001_15986_1 
#>                                     "01212"                                     "01212" 
#> lane1_3600STDY6077898_TTGGTATG_L001_15986_1 lane1_3600STDY6077899_TGAACTGG_L001_15986_1 
#>                                     "01211"                                      "0221" 
#> lane1_3600STDY6077900_TACTTCGG_L001_15986_1 lane1_3600STDY6077901_TCTCACGG_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077902_TCAGGAGG_L001_15986_1 lane1_3600STDY6077903_TAAGTTCG_L001_15986_1 
#>                                     "01212"                                     "01211" 
#> lane1_3600STDY6077904_TCCAGTCG_L001_15986_1 lane1_3600STDY6077905_TGTATGCG_L001_15986_1 
#>                                      "0221"                                     "01211" 
#> lane1_3600STDY6077906_TCATTGAG_L001_15986_1 lane1_3600STDY6077907_TGGCTCAG_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077908_TATGCCAG_L001_15986_1 lane1_3600STDY6077909_TCAGATTC_L001_15986_1 
#>                                     "01212"                                     "01212" 
#> lane1_3600STDY6077910_TACTAGTC_L001_15986_1 lane1_3600STDY6077911_TTCAGCTC_L001_15986_1 
#>                                     "01211"                                      "0221" 
#> lane1_3600STDY6077912_TGTCTATC_L001_15986_1 lane1_3600STDY6077913_TATGTGGC_L001_15986_1 
#>                                     "01212"                                     "01211" 
#> lane1_3600STDY6077914_TTACTCGC_L001_15986_1 lane1_3600STDY6077915_TCGTTAGC_L001_15986_1 
#>                                      "0221"                                     "01212" 
#> lane1_3600STDY6077916_TACCGAGC_L001_15986_1 lane1_3600STDY6077917_TGTTCTCC_L001_15986_1 
#>                                     "01212"                                     "01212" 
#> lane1_3600STDY6077918_TTCGCACC_L001_15986_1 lane1_3600STDY6077919_TTGCGTAC_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077920_TCTACGAC_L001_15986_1 lane1_3600STDY6077921_TGACAGAC_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077922_TAGAACAC_L001_15986_1 lane1_3600STDY6077923_TCATCCTA_L001_15986_1 
#>                                     "01211"                                     "01212" 
#> lane1_3600STDY6077924_TGCTGATA_L001_15986_1 lane1_3600STDY6077925_TAGACGGA_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077926_TGTGAAGA_L001_15986_1 lane1_3600STDY6077927_TCTCTTCA_L001_15986_1 
#>                                     "01211"                                     "01212" 
#> lane1_3600STDY6077928_TTGTTCCA_L001_15986_1 lane1_3600STDY6077929_TGAAGCCA_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077930_TACCACCA_L001_15986_1 lane1_3600STDY6077931_TGCGTGAA_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077932_GGTGAGTT_L001_15986_1 lane1_3600STDY6077933_GATCTCTT_L001_15986_1 
#>                                     "01211"                                      "0221" 
#> lane1_3600STDY6077934_GTGTCCTT_L001_15986_1 lane1_3600STDY6077935_GACGGATT_L001_15986_1 
#>                                      "0221"                                     "01211" 
#> lane1_3600STDY6077936_GCAACATT_L001_15986_1 lane1_3600STDY6077937_GGTCGTGT_L001_15986_1 
#>                                     "01212"                                     "01212" 
#> lane1_3600STDY6077938_GAATCTGT_L001_15986_1 lane1_3600STDY6077939_GTACATCT_L001_15986_1 
#>                                     "01212"                                     "01211" 
#> lane1_3600STDY6077940_GAGGTGCT_L001_15986_1 lane1_3600STDY6077941_GCATGGCT_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077942_GTTAGCCT_L001_15986_1 lane1_3600STDY6077943_GTCGCTAT_L001_15986_1 
#>                                     "01211"                                     "01212" 
#> lane1_3600STDY6077944_GGAATGAT_L001_15986_1 lane1_3600STDY6077945_GAGCCAAT_L001_15986_1 
#>                                     "01211"                                     "01212" 
#> lane1_3600STDY6077946_GCTCCTTG_L001_15986_1 lane1_3600STDY6077947_GTAAGGTG_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077948_GAGGATGG_L001_15986_1 lane1_3600STDY6077949_GTTGTCGG_L001_15986_1 
#>                                     "01212"                                     "01211" 
#> lane1_3600STDY6077950_GGATTAGG_L001_15986_1 lane1_3600STDY6077951_GATAGAGG_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077952_GTGTGTCG_L001_15986_1 lane1_3600STDY6077953_GCAATCCG_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077954_GACCTTAG_L001_15986_1 lane1_3600STDY6077955_GCCTGTTC_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077956_GCACTGTC_L001_15986_1 lane1_3600STDY6077957_GCTAACTC_L001_15986_1 
#>                                     "01211"                                     "01212" 
#> lane1_3600STDY6077958_GATTCATC_L001_15986_1 lane1_3600STDY6077959_GTCTTGGC_L001_15986_1 
#>                                     "01212"                                     "01212" 
#> lane3_3600STDY6077960_ATCACGTT_L003_15987_1 lane3_3600STDY6077961_CGATGTTT_L003_15987_1 
#>                                      "0221"                                      "0221" 
#> lane3_3600STDY6077962_TTAGGCAT_L003_15987_1 lane3_3600STDY6077963_TGACCACT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077964_ACAGTGGT_L003_15987_1 lane3_3600STDY6077965_GCCAATGT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077966_CAGATCTG_L003_15987_1 lane3_3600STDY6077967_ACTTGATG_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077968_GATCAGCG_L003_15987_1 lane3_3600STDY6077969_TAGCTTGT_L003_15987_1 
#>                                      "0122"                                     "01233" 
#> lane3_3600STDY6077970_GGCTACAG_L003_15987_1 lane3_3600STDY6077971_CTTGTACT_L003_15987_1 
#>                                     "01232"                                     "01232" 
#> lane3_3600STDY6077972_TGGTTGTT_L003_15987_1 lane3_3600STDY6077973_TCTCGGTT_L003_15987_1 
#>                                     "01233"                                      "0122" 
#> lane3_3600STDY6077974_TAAGCGTT_L003_15987_1 lane3_3600STDY6077975_TCCGTCTT_L003_15987_1 
#>                                     "01231"                                     "01231" 
#> lane3_3600STDY6077976_TGTACCTT_L003_15987_1 lane3_3600STDY6077977_TTCTGTGT_L003_15987_1 
#>                                     "01232"                                      "0122" 
#> lane3_3600STDY6077978_TCTGCTGT_L003_15987_1 lane3_3600STDY6077979_TTGGAGGT_L003_15987_1 
#>                                      "0224"                                      "0122" 
#> lane3_3600STDY6077980_TCGAGCGT_L003_15987_1 lane3_3600STDY6077981_TGATACGT_L003_15987_1 
#>                                      "0122"                                     "01233" 
#> lane3_3600STDY6077982_TGCATAGT_L003_15987_1 lane3_3600STDY6077983_TTGACTCT_L003_15987_1 
#>                                      "0122"                                     "01233" 
#> lane3_3600STDY6077984_TGCGATCT_L003_15987_1 lane3_3600STDY6077985_TTCCTGCT_L003_15987_1 
#>                                     "01233"                                      "0122" 
#> lane3_3600STDY6077986_TAGTGACT_L003_15987_1 lane3_3600STDY6077987_TACAGGAT_L003_15987_1 
#>                                     "01233"                                     "01231" 
#> lane3_3600STDY6077988_TCCTCAAT_L003_15987_1 lane3_3600STDY6077989_TGTGGTTG_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077990_TAGTCTTG_L003_15987_1 lane3_3600STDY6077991_TTCCATTG_L003_15987_1 
#>                                      "0122"                                     "01233" 
#> lane3_3600STDY6077992_TCGAAGTG_L003_15987_1 lane3_3600STDY6077993_TAACGCTG_L003_15987_1 
#>                                      "0122"                                     "01231" 
#> lane3_3600STDY6077994_TTGGTATG_L003_15987_1 lane3_3600STDY6077995_TGAACTGG_L003_15987_1 
#>                                     "01231"                                     "01231" 
#> lane3_3600STDY6077996_TACTTCGG_L003_15987_1 lane3_3600STDY6077997_TCTCACGG_L003_15987_1 
#>                                      "0122"                                      "0224" 
#> lane3_3600STDY6077998_TCAGGAGG_L003_15987_1 lane3_3600STDY6077999_TAAGTTCG_L003_15987_1 
#>                                     "01231"                                     "01231" 
#> lane3_3600STDY6078000_TCCAGTCG_L003_15987_1 lane3_3600STDY6078001_TGTATGCG_L003_15987_1 
#>                                      "0122"                                      "0221" 
#> lane3_3600STDY6078002_TCATTGAG_L003_15987_1 lane3_3600STDY6078003_TGGCTCAG_L003_15987_1 
#>                                     "03422"                                      "0122" 
#> lane3_3600STDY6078004_TATGCCAG_L003_15987_1 lane3_3600STDY6078005_TCAGATTC_L003_15987_1 
#>                                      "0122"                                     "01231" 
#> lane3_3600STDY6078006_TACTAGTC_L003_15987_1 lane3_3600STDY6078007_TTCAGCTC_L003_15987_1 
#>                                     "01231"                                      "0122" 
#> lane3_3600STDY6078008_TGTCTATC_L003_15987_1 lane3_3600STDY6078009_TATGTGGC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078010_TTACTCGC_L003_15987_1 lane3_3600STDY6078011_TCGTTAGC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078012_TACCGAGC_L003_15987_1 lane3_3600STDY6078013_TGTTCTCC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078014_TTCGCACC_L003_15987_1 lane3_3600STDY6078015_TTGCGTAC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078016_TCTACGAC_L003_15987_1 lane3_3600STDY6078017_TGACAGAC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078018_TAGAACAC_L003_15987_1 lane3_3600STDY6078019_TCATCCTA_L003_15987_1 
#>                                     "01233"                                     "01233" 
#> lane3_3600STDY6078020_TGCTGATA_L003_15987_1 lane3_3600STDY6078021_TAGACGGA_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078022_TGTGAAGA_L003_15987_1 lane3_3600STDY6078023_TCTCTTCA_L003_15987_1 
#>                                     "01231"                                     "01233" 
#> lane3_3600STDY6078024_TTGTTCCA_L003_15987_1 lane3_3600STDY6078025_TGAAGCCA_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078026_TACCACCA_L003_15987_1 lane3_3600STDY6078027_TGCGTGAA_L003_15987_1 
#>                                     "01233"                                      "0221" 
#> lane3_3600STDY6078028_GGTGAGTT_L003_15987_1 lane3_3600STDY6078029_GATCTCTT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078030_GTGTCCTT_L003_15987_1 lane3_3600STDY6078031_GACGGATT_L003_15987_1 
#>                                     "01231"                                     "01232" 
#> lane3_3600STDY6078032_GCAACATT_L003_15987_1 lane3_3600STDY6078033_GGTCGTGT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078034_GAATCTGT_L003_15987_1 lane3_3600STDY6078035_GTACATCT_L003_15987_1 
#>                                      "0122"                                     "01233" 
#> lane3_3600STDY6078036_GAGGTGCT_L003_15987_1 lane3_3600STDY6078037_GCATGGCT_L003_15987_1 
#>                                     "01231"                                      "0122" 
#> lane3_3600STDY6078038_GTTAGCCT_L003_15987_1 lane3_3600STDY6078039_GTCGCTAT_L003_15987_1 
#>                                     "01233"                                     "01233" 
#> lane3_3600STDY6078040_GGAATGAT_L003_15987_1 lane3_3600STDY6078041_GAGCCAAT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078042_GCTCCTTG_L003_15987_1 lane3_3600STDY6078043_GTAAGGTG_L003_15987_1 
#>                                     "01231"                                     "01232" 
#> lane3_3600STDY6078044_GAGGATGG_L003_15987_1 lane3_3600STDY6078045_GTTGTCGG_L003_15987_1 
#>                                     "01232"                                     "01232" 
#> lane3_3600STDY6078046_GGATTAGG_L003_15987_1 lane3_3600STDY6078047_GATAGAGG_L003_15987_1 
#>                                     "01232"                                     "01232" 
#> lane3_3600STDY6078048_GTGTGTCG_L003_15987_1 lane3_3600STDY6078049_GCAATCCG_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078050_GACCTTAG_L003_15987_1 lane3_3600STDY6078051_GCCTGTTC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078052_GCACTGTC_L003_15987_1 lane3_3600STDY6078053_GCTAACTC_L003_15987_1 
#>                                      "0122"                                     "01232" 
#> lane3_3600STDY6078054_GATTCATC_L003_15987_1 lane3_3600STDY6078055_GTCTTGGC_L003_15987_1 
#>                                     "01232"                                     "01232" 
#> lane1_3600STDY6167693_ATCACGTT_L001_17236_1 lane1_3600STDY6167694_CGATGTTT_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167695_TTAGGCAT_L001_17236_1 lane1_3600STDY6167696_TGACCACT_L001_17236_1 
#>                                     "03421"                                      "0112" 
#> lane1_3600STDY6167697_ACAGTGGT_L001_17236_1 lane1_3600STDY6167698_GCCAATGT_L001_17236_1 
#>                                      "0224"                                      "0113" 
#> lane1_3600STDY6167699_CAGATCTG_L001_17236_1 lane1_3600STDY6167700_ACTTGATG_L001_17236_1 
#>                                      "0113"                                      "0221" 
#> lane1_3600STDY6167701_GATCAGCG_L001_17236_1 lane1_3600STDY6167702_TAGCTTGT_L001_17236_1 
#>                                      "0113"                                       "014" 
#> lane1_3600STDY6167703_GGCTACAG_L001_17236_1 lane1_3600STDY6167704_CTTGTACT_L001_17236_1 
#>                                       "014"                                     "03421" 
#> lane1_3600STDY6167705_TGGTTGTT_L001_17236_1 lane1_3600STDY6167706_TCTCGGTT_L001_17236_1 
#>                                       "014"                                      "0221" 
#> lane1_3600STDY6167707_TAAGCGTT_L001_17236_1 lane1_3600STDY6167708_TCCGTCTT_L001_17236_1 
#>                                      "0221"                                       "013" 
#> lane1_3600STDY6167709_TGTACCTT_L001_17236_1 lane1_3600STDY6167710_TTCTGTGT_L001_17236_1 
#>                                      "0113"                                      "0221" 
#> lane1_3600STDY6167711_TCTGCTGT_L001_17236_1 lane1_3600STDY6167712_TTGGAGGT_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167713_TCGAGCGT_L001_17236_1 lane1_3600STDY6167714_TGATACGT_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167715_TGCATAGT_L001_17236_1 lane1_3600STDY6167716_TTGACTCT_L001_17236_1 
#>                                      "0113"                                       "013" 
#> lane1_3600STDY6167717_TGCGATCT_L001_17236_1 lane1_3600STDY6167718_TTCCTGCT_L001_17236_1 
#>                                       "013"                                      "0221" 
#> lane1_3600STDY6167719_TAGTGACT_L001_17236_1 lane1_3600STDY6167720_TACAGGAT_L001_17236_1 
#>                                     "03423"                                     "03422" 
#> lane1_3600STDY6167721_TCCTCAAT_L001_17236_1 lane1_3600STDY6167722_TGTGGTTG_L001_17236_1 
#>                                     "03423"                                      "0113" 
#> lane1_3600STDY6167723_TAGTCTTG_L001_17236_1 lane1_3600STDY6167724_TTCCATTG_L001_17236_1 
#>                                      "0113"                                      "0221" 
#> lane1_3600STDY6167725_TCGAAGTG_L001_17236_1 lane1_3600STDY6167726_TAACGCTG_L001_17236_1 
#>                                      "0113"                                       "014" 
#> lane1_3600STDY6167727_TTGGTATG_L001_17236_1 lane1_3600STDY6167728_TGAACTGG_L001_17236_1 
#>                                       "013"                                     "01212" 
#> lane1_3600STDY6167729_TACTTCGG_L001_17236_1 lane1_3600STDY6167730_TCTCACGG_L001_17236_1 
#>                                      "0111"                                       "014" 
#> lane1_3600STDY6167731_TCAGGAGG_L001_17236_1 lane1_3600STDY6167732_TAAGTTCG_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6167733_TCCAGTCG_L001_17236_1 lane1_3600STDY6167734_TGTATGCG_L001_17236_1 
#>                                      "0113"                                      "0221" 
#> lane1_3600STDY6167735_TCATTGAG_L001_17236_1 lane1_3600STDY6167736_TGGCTCAG_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167737_TATGCCAG_L001_17236_1 lane1_3600STDY6167738_TCAGATTC_L001_17236_1 
#>                                      "0113"                                       "013" 
#> lane1_3600STDY6167739_TACTAGTC_L001_17236_1 lane1_3600STDY6167740_TTCAGCTC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167741_TGTCTATC_L001_17236_1 lane1_3600STDY6167742_TATGTGGC_L001_17236_1 
#>                                      "0113"                                       "013" 
#> lane1_3600STDY6167743_TTACTCGC_L001_17236_1 lane1_3600STDY6167744_TCGTTAGC_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167745_TACCGAGC_L001_17236_1 lane1_3600STDY6167746_TGTTCTCC_L001_17236_1 
#>                                     "03421"                                      "0111" 
#> lane1_3600STDY6167747_TTCGCACC_L001_17236_1 lane1_3600STDY6167748_TTGCGTAC_L001_17236_1 
#>                                     "03421"                                      "0111" 
#> lane1_3600STDY6167749_TCTACGAC_L001_17236_1 lane1_3600STDY6167750_TGACAGAC_L001_17236_1 
#>                                      "0111"                                      "0113" 
#> lane1_3600STDY6167751_TAGAACAC_L001_17236_1 lane1_3600STDY6167752_TCATCCTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167753_TGCTGATA_L001_17236_1 lane1_3600STDY6167754_TAGACGGA_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167755_TGTGAAGA_L001_17236_1 lane1_3600STDY6167756_TCTCTTCA_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6167757_TTGTTCCA_L001_17236_1 lane1_3600STDY6167758_TGAAGCCA_L001_17236_1 
#>                                      "0111"                                      "0221" 
#> lane1_3600STDY6167759_TACCACCA_L001_17236_1 lane1_3600STDY6167760_TGCGTGAA_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6167761_GGTGAGTT_L001_17236_1 lane1_3600STDY6167762_GATCTCTT_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167763_GTGTCCTT_L001_17236_1 lane1_3600STDY6167764_GACGGATT_L001_17236_1 
#>                                      "0112"                                       "013" 
#> lane1_3600STDY6167765_GCAACATT_L001_17236_1 lane1_3600STDY6167766_GGTCGTGT_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6167767_GAATCTGT_L001_17236_1 lane1_3600STDY6167768_GTACATCT_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167769_GAGGTGCT_L001_17236_1 lane1_3600STDY6167770_GCATGGCT_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167771_GTTAGCCT_L001_17236_1 lane1_3600STDY6167772_GTCGCTAT_L001_17236_1 
#>                                      "0112"                                      "0111" 
#> lane1_3600STDY6167773_GGAATGAT_L001_17236_1 lane1_3600STDY6167774_GAGCCAAT_L001_17236_1 
#>                                      "0112"                                      "0113" 
#> lane1_3600STDY6167775_GCTCCTTG_L001_17236_1 lane1_3600STDY6167776_GTAAGGTG_L001_17236_1 
#>                                      "0111"                                      "0221" 
#> lane1_3600STDY6167777_GAGGATGG_L001_17236_1 lane1_3600STDY6167778_GTTGTCGG_L001_17236_1 
#>                                      "0112"                                      "0221" 
#> lane1_3600STDY6167779_GGATTAGG_L001_17236_1 lane1_3600STDY6167780_GATAGAGG_L001_17236_1 
#>                                      "0113"                                      "0112" 
#> lane1_3600STDY6167781_GTGTGTCG_L001_17236_1 lane1_3600STDY6167782_GCAATCCG_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167783_GACCTTAG_L001_17236_1 lane1_3600STDY6167784_GCCTGTTC_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167785_GCACTGTC_L001_17236_1 lane1_3600STDY6167786_GCTAACTC_L001_17236_1 
#>                                      "0112"                                      "0111" 
#> lane1_3600STDY6167787_GATTCATC_L001_17236_1 lane1_3600STDY6167788_GTCTTGGC_L001_17236_1 
#>                                      "0112"                                      "0221" 
#> lane1_3600STDY6167789_GTAGAAGC_L001_17236_1 lane1_3600STDY6167790_GATGGTCC_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6167791_GTGCTACC_L001_17236_1 lane1_3600STDY6167792_GCGATTAC_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167793_GGTTGGAC_L001_17236_1 lane1_3600STDY6167794_GGCACAAC_L001_17236_1 
#>                                      "0112"                                      "0111" 
#> lane1_3600STDY6167795_GACACTTA_L001_17236_1 lane1_3600STDY6167796_GTGCAGTA_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167797_GGAGTCTA_L001_17236_1 lane1_3600STDY6167798_GCTATGGA_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6167799_GAGTGCGA_L001_17236_1 lane1_3600STDY6167800_GTAACCGA_L001_17236_1 
#>                                     "03422"                                      "0111" 
#> lane1_3600STDY6167801_GGCAAGCA_L001_17236_1 lane1_3600STDY6167802_GCCTTACA_L001_17236_1 
#>                                      "0112"                                       "013" 
#> lane1_3600STDY6167803_GAACGACA_L001_17236_1 lane1_3600STDY6167804_GCAGGTAA_L001_17236_1 
#>                                       "013"                                      "0111" 
#> lane1_3600STDY6167805_GCGTCGAA_L001_17236_1 lane1_3600STDY6167806_CGTTCGGT_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6167807_CACCAGGT_L001_17236_1 lane1_3600STDY6167808_CTGCGAGT_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6167809_CCGTATCT_L001_17236_1 lane1_3600STDY6167810_CGCTTCCT_L001_17236_1 
#>                                      "0111"                                      "0222" 
#> lane1_3600STDY6167811_CAAGACCT_L001_17236_1 lane1_3600STDY6167812_CACACACT_L001_17236_1 
#>                                      "0111"                                       "014" 
#> lane1_3600STDY6167813_CCTAGTAT_L001_17236_1 lane1_3600STDY6167814_CCACCGAT_L001_17236_1 
#>                                      "0221"                                      "0112" 
#> lane1_3600STDY6167815_CTTCACAT_L001_17236_1 lane1_3600STDY6167816_CTATCATG_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167817_CATGAATG_L001_17236_1 lane1_3600STDY6167818_CCACTTGG_L001_17236_1 
#>                                     "03421"                                      "0111" 
#> lane1_3600STDY6167819_CTGTACGG_L001_17236_1 lane1_3600STDY6167820_CTAGATAG_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167821_CACTCGAG_L001_17236_1 lane1_3600STDY6167822_CCGACAAG_L001_17236_1 
#>                                     "03421"                                       "013" 
#> lane1_3600STDY6167823_CTTGCTTC_L001_17236_1 lane1_3600STDY6167824_CATAGGTC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167825_CACATTGC_L001_17236_1 lane1_3600STDY6167826_CGCTAAGC_L001_17236_1 
#>                                      "0111"                                       "014" 
#> lane1_3600STDY6167827_CAACCTCC_L001_17236_1 lane1_3600STDY6167828_CAGCTGAC_L001_17236_1 
#>                                       "013"                                      "0111" 
#> lane1_3600STDY6167829_CTCAAGAC_L001_17236_1 lane1_3600STDY6167830_CGTGTCAC_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167831_CCATGCAC_L001_17236_1 lane1_3600STDY6167832_CGTTACTA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167833_CAAGTAGA_L001_17236_1 lane1_3600STDY6167834_CTCTCTCA_L001_17236_1 
#>                                      "0111"                                      "0113" 
#> lane1_3600STDY6167835_CGACTGCA_L001_17236_1 lane1_3600STDY6167836_CCTGAGCA_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6167837_CAGGCTAA_L001_17236_1 lane1_3600STDY6167838_CGGAGGAA_L001_17236_1 
#>                                       "014"                                      "0113" 
#> lane1_3600STDY6167839_AGGAGATT_L001_17236_1 lane1_3600STDY6167840_AGGCAGCT_L001_17236_1 
#>                                       "013"                                      "0111" 
#> lane1_3600STDY6167841_ACGTTCAT_L001_17236_1 lane1_3600STDY6167842_AACGTGTG_L001_17236_1 
#>                                     "03423"                                       "013" 
#> lane1_3600STDY6167843_AGACCGTG_L001_17236_1 lane1_3600STDY6167844_ACCTCTGG_L001_17236_1 
#>                                     "03423"                                      "0221" 
#> lane1_3600STDY6167845_ATCCTAGG_L001_17236_1 lane1_3600STDY6167846_ATCAACCG_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167847_AGGTCACG_L001_17236_1 lane1_3600STDY6167848_ACTGTTAG_L001_17236_1 
#>                                      "0221"                                       "013" 
#> lane1_3600STDY6167849_AAGAGTAG_L001_17236_1 lane1_3600STDY6167850_ATTCGGAG_L001_17236_1 
#>                                       "013"                                       "014" 
#> lane1_3600STDY6167851_ACGCAATC_L001_17236_1 lane1_3600STDY6167852_ACAAGTGC_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167853_ATGGATCC_L001_17236_1 lane1_3600STDY6167854_AGAGGACC_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167855_ATCTCCAC_L001_17236_1 lane1_3600STDY6167856_ATTGGCTA_L001_17236_1 
#>                                      "0111"                                      "0113" 
#> lane1_3600STDY6167857_AATCCTGA_L001_17236_1 lane1_3600STDY6167858_AGGATTCA_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6167859_AACTGGCA_L001_17236_1 lane1_3600STDY6167860_ACAACGCA_L001_17236_1 
#>                                       "013"                                      "0112" 
#> lane1_3600STDY6167861_CGGAAACA_L001_17236_1 lane1_3600STDY6167862_AATGAATT_L001_17236_1 
#>                                      "0221"                                       "014" 
#> lane1_3600STDY6167863_TAGGACCC_L001_17236_1 lane1_3600STDY6167864_TCTCAGTG_L001_17236_1 
#>                                      "0113"                                      "0111" 
#> lane1_3600STDY6167865_CATGGGAA_L001_17236_1 lane1_3600STDY6167866_CCTAAGAT_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167867_CTCAGATA_L001_17236_1 lane1_3600STDY6167868_CCCATAGG_L001_17236_1 
#>                                      "0111"                                       "014" 
#> lane1_3600STDY6167869_GCTATGAC_L001_17236_1 lane1_3600STDY6167870_GCTGTGAA_L001_17236_1 
#>                                      "0111"                                      "0221" 
#> lane1_3600STDY6167871_ACCTTCAA_L001_17236_1 lane1_3600STDY6167872_ACAAAGCC_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6167873_CAAAACCG_L001_17236_1 lane1_3600STDY6167874_GCTGGACA_L001_17236_1 
#>                                      "0221"                                       "014" 
#> lane1_3600STDY6167875_AAGTCGTA_L001_17236_1 lane1_3600STDY6167876_CATCCGTA_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6167877_TTGTGTCT_L001_17236_1 lane1_3600STDY6167878_TGCTCTAG_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6167879_ACCCAACA_L001_17236_1 lane1_3600STDY6167880_CGATCTGA_L001_17236_1 
#>                                      "0221"                                      "0112" 
#> lane1_3600STDY6167881_GTTCCACG_L001_17236_1 lane1_3600STDY6167882_ACTCTTTC_L001_17236_1 
#>                                      "0111"                                       "013" 
#> lane1_3600STDY6167883_TATTGGAG_L001_17236_1 lane1_3600STDY6167884_TAAACATA_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6167885_GTAAGATA_L001_17236_1 lane1_3600STDY6167886_TACCGCAA_L001_17236_1 
#>                                     "03423"                                       "013" 
#> lane1_3600STDY6167887_TATCTCCT_L001_17236_1 lane1_3600STDY6167888_TGTCATCT_L001_17236_1 
#>                                     "03422"                                      "0111" 
#> lane1_3600STDY6167889_ATAGCTCT_L001_17236_1 lane1_3600STDY6167890_AGTCCAAC_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167891_TTTGGGCA_L001_17236_1 lane1_3600STDY6167892_TCTGACGC_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167893_TGTCGACT_L001_17236_1 lane1_3600STDY6167894_GTCACGTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167895_TTGAGCGA_L001_17236_1 lane1_3600STDY6167896_GAGACATA_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167897_GTCAAGCT_L001_17236_1 lane1_3600STDY6167898_AGCAAGTT_L001_17236_1 
#>                                      "0232"                                     "03423" 
#> lane1_3600STDY6167899_GACGCTCA_L001_17236_1 lane1_3600STDY6167900_ACGGCAGC_L001_17236_1 
#>                                      "0112"                                     "03421" 
#> lane1_3600STDY6167901_AGAACTGA_L001_17236_1 lane1_3600STDY6167902_CGCCTTTG_L001_17236_1 
#>                                     "03421"                                      "0112" 
#> lane1_3600STDY6167903_TAAGGTCA_L001_17236_1 lane1_3600STDY6167904_ACGTTGGC_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167905_CCAGCTTA_L001_17236_1 lane1_3600STDY6167906_GAATCCTA_L001_17236_1 
#>                                      "0113"                                      "0111" 
#> lane1_3600STDY6167907_ACTTCGTA_L001_17236_1 lane1_3600STDY6167908_TAGTCGGT_L001_17236_1 
#>                                       "013"                                      "0221" 
#> lane1_3600STDY6167909_CGCACGAG_L001_17236_1 lane1_3600STDY6167910_ACGTACTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167911_AGCGCCAA_L001_17236_1 lane1_3600STDY6167912_GCCTGCCC_L001_17236_1 
#>                                      "0113"                                      "0113" 
#> lane1_3600STDY6167913_AGGACGAT_L001_17236_1 lane1_3600STDY6167914_CTTGACCG_L001_17236_1 
#>                                      "0111"                                      "0113" 
#> lane1_3600STDY6167915_AGGTCTAA_L001_17236_1 lane1_3600STDY6167916_CGAGATCC_L001_17236_1 
#>                                       "013"                                      "0111" 
#> lane1_3600STDY6167917_ATTAGCGG_L001_17236_1 lane1_3600STDY6167918_GCGCTGAT_L001_17236_1 
#>                                      "0111"                                      "0221" 
#> lane1_3600STDY6167919_TGCTGAAC_L001_17236_1 lane1_3600STDY6167920_GAGGGCAG_L001_17236_1 
#>                                       "014"                                      "0221" 
#> lane1_3600STDY6167921_GTTTTCAC_L001_17236_1 lane1_3600STDY6167922_GAGATGCC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167923_TTGAGAAG_L001_17236_1 lane1_3600STDY6167924_GCATCCGG_L001_17236_1 
#>                                       "013"                                      "0112" 
#> lane1_3600STDY6167925_GTCACCAG_L001_17236_1 lane1_3600STDY6167926_GAGGTCGC_L001_17236_1 
#>                                      "0112"                                     "03421" 
#> lane1_3600STDY6167927_AAGGGGTA_L001_17236_1 lane1_3600STDY6167928_TTTTACGT_L001_17236_1 
#>                                      "0113"                                      "0112" 
#> lane1_3600STDY6167929_TTCCTACA_L001_17236_1 lane1_3600STDY6167930_AGTGTAGT_L001_17236_1 
#>                                      "0111"                                       "013" 
#> lane1_3600STDY6167931_GTGGCCAA_L001_17236_1 lane1_3600STDY6167932_AAATACTC_L001_17236_1 
#>                                       "013"                                       "014" 
#> lane1_3600STDY6167933_CACCCGTC_L001_17236_1 lane1_3600STDY6167934_TCGTGGTT_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6167935_ACTTGGGG_L001_17236_1 lane1_3600STDY6167936_GGCTGCTT_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6167937_CAGGGTCG_L001_17236_1 lane1_3600STDY6167938_CTCGTCGA_L001_17236_1 
#>                                      "0112"                                      "0111" 
#> lane1_3600STDY6167939_TCTACAGT_L001_17236_1 lane1_3600STDY6167940_CTTCTAGA_L001_17236_1 
#>                                      "0112"                                     "03421" 
#> lane1_3600STDY6167941_AACGGCTT_L001_17236_1 lane1_3600STDY6167942_ATAAGACT_L001_17236_1 
#>                                      "0111"                                       "013" 
#> lane1_3600STDY6167943_GTTTTTCG_L001_17236_1 lane1_3600STDY6167944_ATTGGTAT_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167945_CGCCAGTA_L001_17236_1 lane1_3600STDY6167946_AAGCCGAA_L001_17236_1 
#>                                      "0113"                                      "0113" 
#> lane1_3600STDY6167947_TGACCCAC_L001_17236_1 lane1_3600STDY6167948_ATTGCACA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167949_CTTTTGAT_L001_17236_1 lane1_3600STDY6167950_TAGCGAGA_L001_17236_1 
#>                                      "0112"                                      "0221" 
#> lane1_3600STDY6167951_TTCGCAGG_L001_17236_1 lane1_3600STDY6167952_TAGTTATT_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167953_TCCTCCGA_L001_17236_1 lane1_3600STDY6167954_GCGGGTCT_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167955_GATTCTAT_L001_17236_1 lane1_3600STDY6167956_ATGCAAAG_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167957_GTCTGAGG_L001_17236_1 lane1_3600STDY6167958_TCTGGCGA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167959_AATTTGCG_L001_17236_1 lane1_3600STDY6167960_TGGGTTGG_L001_17236_1 
#>                                      "0111"                                     "03422" 
#> lane1_3600STDY6167961_AGTTGAAA_L001_17236_1 lane1_3600STDY6167962_GACCGGAA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167963_GATCGAAC_L001_17236_1 lane1_3600STDY6167964_GTATAGGG_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167965_GGTAAGAG_L001_17236_1 lane1_3600STDY6167966_AGTCCGAT_L001_17236_1 
#>                                      "0221"                                      "0112" 
#> lane1_3600STDY6167967_ATACAGGC_L001_17236_1 lane1_3600STDY6167968_TGAGACTC_L001_17236_1 
#>                                      "0111"                                      "0113" 
#> lane1_3600STDY6167969_ACTCAGGA_L001_17236_1 lane1_3600STDY6167970_GTGTCTGA_L001_17236_1 
#>                                      "0113"                                     "03421" 
#> lane1_3600STDY6167971_CTTGAATC_L001_17236_1 lane1_3600STDY6167972_CCGCATGA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167973_AAGTAACA_L001_17236_1 lane1_3600STDY6167974_GTGGTACT_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167975_AGCTGTGC_L001_17236_1 lane1_3600STDY6167976_TTACCTTC_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167977_TCCGGGTA_L001_17236_1 lane1_3600STDY6167978_CTACGTAA_L001_17236_1 
#>                                      "0112"                                      "0111" 
#> lane1_3600STDY6167979_TCGGACCG_L001_17236_1 lane1_3600STDY6167980_ATGCGTCG_L001_17236_1 
#>                                      "0111"                                       "013" 
#> lane1_3600STDY6167981_TTCTTAGC_L001_17236_1 lane1_3600STDY6167982_TGAGTAAG_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6167983_AAGTGATA_L001_17236_1 lane1_3600STDY6167984_TCGATGCG_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167985_TATTCTGG_L001_17236_1 lane1_3600STDY6167986_AGCCGTGA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167987_AAGCCTTC_L001_17236_1 lane1_3600STDY6167988_AGGTATCC_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167989_AGGATCTC_L001_17236_1 lane1_3600STDY6167990_CTGTTTGA_L001_17236_1 
#>                                      "0221"                                      "0111" 
#> lane1_3600STDY6167991_GGAATTTC_L001_17236_1 lane1_3600STDY6167992_TTGGAGCA_L001_17236_1 
#>                                       "013"                                     "03423" 
#> lane1_3600STDY6167993_AAGGTCTG_L001_17236_1 lane1_3600STDY6167994_AATTAGGC_L001_17236_1 
#>                                     "03422"                                      "0113" 
#> lane1_3600STDY6167995_AATCGGGT_L001_17236_1 lane1_3600STDY6167996_AGGTAGAC_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167997_CTTATTCC_L001_17236_1 lane1_3600STDY6167998_CAGGCTCT_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167999_AAAGCACG_L001_17236_1 lane1_3600STDY6168000_GTATACAC_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6168001_GGACATAT_L001_17236_1 lane1_3600STDY6168002_CGGTTGGG_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6168003_GTCCGTGA_L001_17236_1 lane1_3600STDY6168004_GCCGAACC_L001_17236_1 
#>                                      "0111"                                       "013" 
#> lane1_3600STDY6168005_ACTTTACT_L001_17236_1 lane1_3600STDY6168006_GGGTCCAT_L001_17236_1 
#>                                     "03423"                                       "013" 
#> lane1_3600STDY6168007_ATAACTAG_L001_17236_1 lane1_3600STDY6168008_AATAGAGA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6168009_TCACCATT_L001_17236_1 lane1_3600STDY6168010_CGCCTGAT_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6168011_GCGTGAAC_L001_17236_1 lane1_3600STDY6168012_TAAGGGTG_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6168013_GGTGTCGA_L001_17236_1 lane1_3600STDY6168014_CCGTTAGG_L001_17236_1 
#>                                      "0112"                                       "013" 
#> lane1_3600STDY6168015_TGGCAAAA_L001_17236_1 lane1_3600STDY6168016_CCTACCCG_L001_17236_1 
#>                                      "0111"                                      "0222" 
#> lane1_3600STDY6168017_AACAGCGC_L001_17236_1 lane1_3600STDY6168018_TATACATC_L001_17236_1 
#>                                       "013"                                      "0221" 
#> lane1_3600STDY6168019_AAGCGACT_L001_17236_1 lane1_3600STDY6168020_GAAGCGCA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6168021_ACCTCTAC_L001_17236_1 lane1_3600STDY6168022_GATTGCGT_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6168023_GCTGGTTG_L001_17236_1 lane1_3600STDY6168024_ATCGTCCT_L001_17236_1 
#>                                      "0221"                                      "0112" 
#> lane1_3600STDY6168025_GGACACGG_L001_17236_1 lane1_3600STDY6168026_CGCACCTA_L001_17236_1 
#>                                      "0112"                                      "0111" 
#> lane1_3600STDY6168027_CTTCGGCT_L001_17236_1 lane1_3600STDY6168028_CGAATCGA_L001_17236_1 
#>                                      "0111"                                       "014" 
#> lane1_3600STDY6168029_TAACAACT_L001_17236_1 lane1_3600STDY6168030_AGCTCTTT_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168031_TAATCCCT_L001_17236_1 lane1_3600STDY6168032_AGGACACT_L001_17236_1 
#>                                      "0113"                                     "03423" 
#> lane1_3600STDY6168033_TTACACTA_L001_17236_1 lane1_3600STDY6168034_AAACATCA_L001_17236_1 
#>                                      "0111"                                      "0113" 
#> lane1_3600STDY6168035_CCATAGCT_L001_17236_1 lane1_3600STDY6168036_GTTATGGC_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6168037_ATCCCCTA_L001_17236_1 lane1_3600STDY6168038_CATACTAC_L001_17236_1 
#>                                      "0111"                                       "014" 
#> lane1_3600STDY6168039_CAATTGTT_L001_17236_1 lane1_3600STDY6168040_AAACCCGT_L001_17236_1 
#>                                       "014"                                      "0221" 
#> lane1_3600STDY6168041_CAGATTTC_L001_17236_1 lane1_3600STDY6168042_GCGTAGGT_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6168043_GGCATTCG_L001_17236_1 lane1_3600STDY6168044_TGGGGCTT_L001_17236_1 
#>                                      "0113"                                      "0112" 
#> lane1_3600STDY6168045_CTGACTAC_L001_17236_1 lane1_3600STDY6168046_AACTTTTA_L001_17236_1 
#>                                      "0112"                                     "03423" 
#> lane1_3600STDY6168047_AGGGATTC_L001_17236_1 lane1_3600STDY6168048_CCGAGTAG_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6168049_GGGGACTA_L001_17236_1 lane1_3600STDY6168050_GGAGTTGA_L001_17236_1 
#>                                      "0113"                                      "0111" 
#> lane1_3600STDY6168051_AGCTCATC_L001_17236_1 lane1_3600STDY6168052_TAATCAAC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168053_ACTGGTCG_L001_17236_1 lane1_3600STDY6168054_GACGATTG_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168055_AGCGATGA_L001_17236_1 lane1_3600STDY6168056_GAAGAGAT_L001_17236_1 
#>                                      "0113"                                     "03423" 
#> lane1_3600STDY6168057_CGTATGCA_L001_17236_1 lane1_3600STDY6168058_CACGTGCG_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6168059_GCTTAAAC_L001_17236_1 lane1_3600STDY6168060_GTTCCGCA_L001_17236_1 
#>                                       "013"                                      "0111" 
#> lane1_3600STDY6168061_GTATCGTC_L001_17236_1 lane1_3600STDY6168062_GTCCTCAC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168063_GTACGGAC_L001_17236_1 lane1_3600STDY6168064_CATTTTGC_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6168065_TCCTCTCT_L001_17236_1 lane1_3600STDY6168066_AGCAACGA_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6168067_ACAGAAGA_L001_17236_1 lane1_3600STDY6168068_CGACCCTT_L001_17236_1 
#>                                       "013"                                      "0111" 
#> lane1_3600STDY6168069_CTGCCTAG_L001_17236_1 lane1_3600STDY6168070_GAGCGCAT_L001_17236_1 
#>                                      "0221"                                       "013" 
#> lane1_3600STDY6168071_AACTTATC_L001_17236_1 lane1_3600STDY6168072_CCGATGTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168073_TTACTACC_L001_17236_1 lane1_3600STDY6168074_CAAGGAGC_L001_17236_1 
#>                                       "013"                                       "014" 
#> lane1_3600STDY6168075_TGGTTGAC_L001_17236_1 lane1_3600STDY6168076_ACCTGCTG_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane4_3600STDY6184181_ATCACGTT_L004_17480_1 lane4_3600STDY6184182_CGATGTTT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184183_TTAGGCAT_L004_17480_1 lane4_3600STDY6184184_TGACCACT_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184185_ACAGTGGT_L004_17480_1 lane4_3600STDY6184186_GCCAATGT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184187_CAGATCTG_L004_17480_1 lane4_3600STDY6184188_ACTTGATG_L004_17480_1 
#>                                       "032"                                      "0211" 
#> lane4_3600STDY6184189_GATCAGCG_L004_17480_1 lane4_3600STDY6184190_TAGCTTGT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184191_GGCTACAG_L004_17480_1 lane4_3600STDY6184192_CTTGTACT_L004_17480_1 
#>                                       "032"                                      "0211" 
#> lane4_3600STDY6184193_TGGTTGTT_L004_17480_1 lane4_3600STDY6184194_TCTCGGTT_L004_17480_1 
#>                                       "032"                                      "0312" 
#> lane4_3600STDY6184195_TAAGCGTT_L004_17480_1 lane4_3600STDY6184196_TCCGTCTT_L004_17480_1 
#>                                      "0312"                                      "0341" 
#> lane4_3600STDY6184197_TGTACCTT_L004_17480_1 lane4_3600STDY6184198_TTCTGTGT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184199_TCTGCTGT_L004_17480_1 lane4_3600STDY6184200_TTGGAGGT_L004_17480_1 
#>                                      "0212"                                      "0212" 
#> lane4_3600STDY6184201_TCGAGCGT_L004_17480_1 lane4_3600STDY6184202_TGATACGT_L004_17480_1 
#>                                      "0313"                                       "032" 
#> lane4_3600STDY6184203_TGCATAGT_L004_17480_1 lane4_3600STDY6184204_TTGACTCT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184205_TGCGATCT_L004_17480_1 lane4_3600STDY6184206_TTCCTGCT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184207_TAGTGACT_L004_17480_1 lane4_3600STDY6184208_TACAGGAT_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184209_TCCTCAAT_L004_17480_1 lane4_3600STDY6184210_TGTGGTTG_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184211_TAGTCTTG_L004_17480_1 lane4_3600STDY6184212_TTCCATTG_L004_17480_1 
#>                                      "0212"                                      "0211" 
#> lane4_3600STDY6184213_TCGAAGTG_L004_17480_1 lane4_3600STDY6184214_TAACGCTG_L004_17480_1 
#>                                      "0221"                                      "0341" 
#> lane4_3600STDY6184215_TTGGTATG_L004_17480_1 lane4_3600STDY6184216_TGAACTGG_L004_17480_1 
#>                                      "0213"                                      "0222" 
#> lane4_3600STDY6184217_TACTTCGG_L004_17480_1 lane4_3600STDY6184218_TCTCACGG_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184219_TCAGGAGG_L004_17480_1 lane4_3600STDY6184220_TAAGTTCG_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184221_TCCAGTCG_L004_17480_1 lane4_3600STDY6184222_TGTATGCG_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184223_TCATTGAG_L004_17480_1 lane4_3600STDY6184224_TGGCTCAG_L004_17480_1 
#>                                      "0212"                                      "0213" 
#> lane4_3600STDY6184225_TATGCCAG_L004_17480_1 lane4_3600STDY6184226_TCAGATTC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184227_TACTAGTC_L004_17480_1 lane4_3600STDY6184228_TTCAGCTC_L004_17480_1 
#>                                      "0212"                                       "032" 
#> lane4_3600STDY6184229_TGTCTATC_L004_17480_1 lane4_3600STDY6184230_TATGTGGC_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184231_TTACTCGC_L004_17480_1 lane4_3600STDY6184232_TCGTTAGC_L004_17480_1 
#>                                      "0213"                                      "0341" 
#> lane4_3600STDY6184233_TACCGAGC_L004_17480_1 lane4_3600STDY6184234_TGTTCTCC_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184235_TTCGCACC_L004_17480_1 lane4_3600STDY6184236_TTGCGTAC_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184237_TCTACGAC_L004_17480_1 lane4_3600STDY6184238_TGACAGAC_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184239_TAGAACAC_L004_17480_1 lane4_3600STDY6184240_TCATCCTA_L004_17480_1 
#>                                      "0212"                                      "0212" 
#> lane4_3600STDY6184241_TGCTGATA_L004_17480_1 lane4_3600STDY6184242_TAGACGGA_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184243_TGTGAAGA_L004_17480_1 lane4_3600STDY6184244_TCTCTTCA_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184245_TTGTTCCA_L004_17480_1 lane4_3600STDY6184246_TGAAGCCA_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184247_TACCACCA_L004_17480_1 lane4_3600STDY6184248_TGCGTGAA_L004_17480_1 
#>                                      "0222"                                      "0212" 
#> lane4_3600STDY6184249_GGTGAGTT_L004_17480_1 lane4_3600STDY6184250_GATCTCTT_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184251_GTGTCCTT_L004_17480_1 lane4_3600STDY6184252_GACGGATT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184253_GCAACATT_L004_17480_1 lane4_3600STDY6184254_GGTCGTGT_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184255_GAATCTGT_L004_17480_1 lane4_3600STDY6184256_GTACATCT_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184257_GAGGTGCT_L004_17480_1 lane4_3600STDY6184258_GCATGGCT_L004_17480_1 
#>                                      "0232"                                      "0211" 
#> lane4_3600STDY6184259_GTTAGCCT_L004_17480_1 lane4_3600STDY6184260_GTCGCTAT_L004_17480_1 
#>                                      "0211"                                      "0222" 
#> lane4_3600STDY6184261_GGAATGAT_L004_17480_1 lane4_3600STDY6184262_GAGCCAAT_L004_17480_1 
#>                                      "0232"                                      "0212" 
#> lane4_3600STDY6184263_GCTCCTTG_L004_17480_1 lane4_3600STDY6184264_GTAAGGTG_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184265_GAGGATGG_L004_17480_1 lane4_3600STDY6184266_GTTGTCGG_L004_17480_1 
#>                                      "0211"                                       "032" 
#> lane4_3600STDY6184267_GGATTAGG_L004_17480_1 lane4_3600STDY6184268_GATAGAGG_L004_17480_1 
#>                                      "0213"                                      "0211" 
#> lane4_3600STDY6184269_GTGTGTCG_L004_17480_1 lane4_3600STDY6184270_GCAATCCG_L004_17480_1 
#>                                      "0341"                                      "0232" 
#> lane4_3600STDY6184271_GACCTTAG_L004_17480_1 lane4_3600STDY6184272_GCCTGTTC_L004_17480_1 
#>                                      "0222"                                      "0211" 
#> lane4_3600STDY6184273_GCACTGTC_L004_17480_1 lane4_3600STDY6184274_GCTAACTC_L004_17480_1 
#>                                      "0211"                                      "0341" 
#> lane4_3600STDY6184275_GATTCATC_L004_17480_1 lane4_3600STDY6184276_GTCTTGGC_L004_17480_1 
#>                                      "0213"                                       "032" 
#> lane4_3600STDY6184277_GTAGAAGC_L004_17480_1 lane4_3600STDY6184278_GATGGTCC_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184279_GTGCTACC_L004_17480_1 lane4_3600STDY6184280_GCGATTAC_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184281_GGTTGGAC_L004_17480_1 lane4_3600STDY6184282_GGCACAAC_L004_17480_1 
#>                                      "0341"                                      "0222" 
#> lane4_3600STDY6184283_GACACTTA_L004_17480_1 lane4_3600STDY6184284_GTGCAGTA_L004_17480_1 
#>                                      "0211"                                      "0341" 
#> lane4_3600STDY6184285_GGAGTCTA_L004_17480_1 lane4_3600STDY6184286_GCTATGGA_L004_17480_1 
#>                                      "0212"                                      "0211" 
#> lane4_3600STDY6184287_GAGTGCGA_L004_17480_1 lane4_3600STDY6184288_GTAACCGA_L004_17480_1 
#>                                      "0212"                                      "0212" 
#> lane4_3600STDY6184289_GGCAAGCA_L004_17480_1 lane4_3600STDY6184290_GCCTTACA_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184291_GAACGACA_L004_17480_1 lane4_3600STDY6184292_GCAGGTAA_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184293_GCGTCGAA_L004_17480_1 lane4_3600STDY6184294_CGTTCGGT_L004_17480_1 
#>                                      "0341"                                      "0222" 
#> lane4_3600STDY6184295_CACCAGGT_L004_17480_1 lane4_3600STDY6184296_CTGCGAGT_L004_17480_1 
#>                                      "0211"                                      "0341" 
#> lane4_3600STDY6184297_CCGTATCT_L004_17480_1 lane4_3600STDY6184298_CGCTTCCT_L004_17480_1 
#>                                      "0211"                                      "0341" 
#> lane4_3600STDY6184299_CAAGACCT_L004_17480_1 lane4_3600STDY6184300_CACACACT_L004_17480_1 
#>                                      "0211"                                       "032" 
#> lane4_3600STDY6184301_CCTAGTAT_L004_17480_1 lane4_3600STDY6184302_CCACCGAT_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184303_CTTCACAT_L004_17480_1 lane4_3600STDY6184304_CTATCATG_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184305_CATGAATG_L004_17480_1 lane4_3600STDY6184306_CCACTTGG_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184307_CTGTACGG_L004_17480_1 lane4_3600STDY6184308_CTAGATAG_L004_17480_1 
#>                                      "0211"                                      "0341" 
#> lane4_3600STDY6184309_CACTCGAG_L004_17480_1 lane4_3600STDY6184310_CCGACAAG_L004_17480_1 
#>                                      "0222"                                       "032" 
#> lane4_3600STDY6184311_CTTGCTTC_L004_17480_1 lane4_3600STDY6184312_CATAGGTC_L004_17480_1 
#>                                      "0212"                                      "0222" 
#> lane4_3600STDY6184313_CACATTGC_L004_17480_1 lane4_3600STDY6184314_CGCTAAGC_L004_17480_1 
#>                                      "0213"                                      "0212" 
#> lane4_3600STDY6184315_CAACCTCC_L004_17480_1 lane4_3600STDY6184316_CAGCTGAC_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184317_CTCAAGAC_L004_17480_1 lane4_3600STDY6184318_CGTGTCAC_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184319_CCATGCAC_L004_17480_1 lane4_3600STDY6184320_CGTTACTA_L004_17480_1 
#>                                      "0222"                                      "0341" 
#> lane4_3600STDY6184321_CAAGTAGA_L004_17480_1 lane4_3600STDY6184322_CTCTCTCA_L004_17480_1 
#>                                      "0213"                                      "0211" 
#> lane4_3600STDY6184323_CGACTGCA_L004_17480_1 lane4_3600STDY6184324_CCTGAGCA_L004_17480_1 
#>                                      "0212"                                      "0222" 
#> lane4_3600STDY6184325_CAGGCTAA_L004_17480_1 lane4_3600STDY6184326_CGGAGGAA_L004_17480_1 
#>                                       "032"                                      "0211" 
#> lane4_3600STDY6184327_AGGAGATT_L004_17480_1 lane4_3600STDY6184328_AGGCAGCT_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184329_ACGTTCAT_L004_17480_1 lane4_3600STDY6184330_AACGTGTG_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184331_AGACCGTG_L004_17480_1 lane4_3600STDY6184332_ACCTCTGG_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184333_ATCCTAGG_L004_17480_1 lane4_3600STDY6184334_ATCAACCG_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184335_AGGTCACG_L004_17480_1 lane4_3600STDY6184336_ACTGTTAG_L004_17480_1 
#>                                       "032"                                      "0211" 
#> lane4_3600STDY6184337_AAGAGTAG_L004_17480_1 lane4_3600STDY6184338_ATTCGGAG_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184339_ACGCAATC_L004_17480_1 lane4_3600STDY6184340_ACAAGTGC_L004_17480_1 
#>                                      "0213"                                      "0211" 
#> lane4_3600STDY6184341_ATGGATCC_L004_17480_1 lane4_3600STDY6184342_AGAGGACC_L004_17480_1 
#>                                      "0212"                                      "0222" 
#> lane4_3600STDY6184343_ATCTCCAC_L004_17480_1 lane4_3600STDY6184344_ATTGGCTA_L004_17480_1 
#>                                      "0213"                                      "0212" 
#> lane4_3600STDY6184345_AATCCTGA_L004_17480_1 lane4_3600STDY6184346_AGGATTCA_L004_17480_1 
#>                                       "032"                                      "0222" 
#> lane4_3600STDY6184347_AACTGGCA_L004_17480_1 lane4_3600STDY6184348_ACAACGCA_L004_17480_1 
#>                                      "0221"                                      "0222" 
#> lane4_3600STDY6184349_CGGAAACA_L004_17480_1 lane4_3600STDY6184350_AATGAATT_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184351_TAGGACCC_L004_17480_1 lane4_3600STDY6184352_TCTCAGTG_L004_17480_1 
#>                                      "0341"                                      "0222" 
#> lane4_3600STDY6184353_CATGGGAA_L004_17480_1 lane4_3600STDY6184354_CCTAAGAT_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184355_CTCAGATA_L004_17480_1 lane4_3600STDY6184356_CCCATAGG_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184357_GCTATGAC_L004_17480_1 lane4_3600STDY6184358_GCTGTGAA_L004_17480_1 
#>                                      "0222"                                      "0222" 
#> lane4_3600STDY6184359_ACCTTCAA_L004_17480_1 lane4_3600STDY6184360_ACAAAGCC_L004_17480_1 
#>                                      "0223"                                      "0221" 
#> lane4_3600STDY6184361_CAAAACCG_L004_17480_1 lane4_3600STDY6184362_GCTGGACA_L004_17480_1 
#>                                      "0211"                                       "032" 
#> lane4_3600STDY6184363_AAGTCGTA_L004_17480_1 lane4_3600STDY6184364_CATCCGTA_L004_17480_1 
#>                                      "0211"                                      "0232" 
#> lane4_3600STDY6184365_TTGTGTCT_L004_17480_1 lane4_3600STDY6184366_TGCTCTAG_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184367_ACCCAACA_L004_17480_1 lane4_3600STDY6184368_CGATCTGA_L004_17480_1 
#>                                      "0222"                                      "0211" 
#> lane4_3600STDY6184369_GTTCCACG_L004_17480_1 lane4_3600STDY6184370_ACTCTTTC_L004_17480_1 
#>                                      "0212"                                      "0213" 
#> lane4_3600STDY6184371_TATTGGAG_L004_17480_1 lane4_3600STDY6184372_TAAACATA_L004_17480_1 
#>                                      "0221"                                      "0221" 
#> lane4_3600STDY6184373_GTAAGATA_L004_17480_1 lane4_3600STDY6184374_TACCGCAA_L004_17480_1 
#>                                      "0223"                                       "032" 
#> lane4_3600STDY6184375_TATCTCCT_L004_17480_1 lane4_3600STDY6184376_TGTCATCT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184377_ATAGCTCT_L004_17480_1 lane4_3600STDY6184378_AGTCCAAC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184379_TTTGGGCA_L004_17480_1 lane4_3600STDY6184380_TCTGACGC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184381_TGTCGACT_L004_17480_1 lane4_3600STDY6184382_GTCACGTA_L004_17480_1 
#>                                       "032"                                      "0313" 
#> lane4_3600STDY6184383_TTGAGCGA_L004_17480_1 lane4_3600STDY6184384_GAGACATA_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184385_GTCAAGCT_L004_17480_1 lane4_3600STDY6184386_AGCAAGTT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184387_GACGCTCA_L004_17480_1 lane4_3600STDY6184388_ACGGCAGC_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184389_AGAACTGA_L004_17480_1 lane4_3600STDY6184390_CGCCTTTG_L004_17480_1 
#>                                      "0212"                                      "0222" 
#> lane4_3600STDY6184391_TAAGGTCA_L004_17480_1 lane4_3600STDY6184392_ACGTTGGC_L004_17480_1 
#>                                      "0222"                                      "0212" 
#> lane4_3600STDY6184393_CCAGCTTA_L004_17480_1 lane4_3600STDY6184394_GAATCCTA_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184395_ACTTCGTA_L004_17480_1 lane4_3600STDY6184396_TAGTCGGT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184397_CGCACGAG_L004_17480_1 lane4_3600STDY6184398_ACGTACTA_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184399_AGCGCCAA_L004_17480_1 lane4_3600STDY6184400_GCCTGCCC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184401_AGGACGAT_L004_17480_1 lane4_3600STDY6184402_CTTGACCG_L004_17480_1 
#>                                      "0213"                                       "032" 
#> lane4_3600STDY6184403_AGGTCTAA_L004_17480_1 lane4_3600STDY6184404_CGAGATCC_L004_17480_1 
#>                                      "0213"                                       "032" 
#> lane4_3600STDY6184405_ATTAGCGG_L004_17480_1 lane4_3600STDY6184406_GCGCTGAT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184407_TGCTGAAC_L004_17480_1 lane4_3600STDY6184408_GAGGGCAG_L004_17480_1 
#>                                       "032"                                      "0213" 
#> lane4_3600STDY6184409_GTTTTCAC_L004_17480_1 lane4_3600STDY6184410_GAGATGCC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184411_TTGAGAAG_L004_17480_1 lane4_3600STDY6184412_GCATCCGG_L004_17480_1 
#>                                       "032"                                      "0232" 
#> lane4_3600STDY6184413_GTCACCAG_L004_17480_1 lane4_3600STDY6184414_GAGGTCGC_L004_17480_1 
#>                                      "0211"                                      "0222" 
#> lane4_3600STDY6184415_AAGGGGTA_L004_17480_1 lane4_3600STDY6184416_TTTTACGT_L004_17480_1 
#>                                      "0212"                                      "0211" 
#> lane4_3600STDY6184417_TTCCTACA_L004_17480_1 lane4_3600STDY6184418_AGTGTAGT_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184419_GTGGCCAA_L004_17480_1 lane4_3600STDY6184420_AAATACTC_L004_17480_1 
#>                                      "0212"                                       "032" 
#> lane4_3600STDY6184421_CACCCGTC_L004_17480_1 lane4_3600STDY6184422_TCGTGGTT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184423_ACTTGGGG_L004_17480_1 lane4_3600STDY6184424_GGCTGCTT_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184425_CAGGGTCG_L004_17480_1 lane4_3600STDY6184426_CTCGTCGA_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184427_TCTACAGT_L004_17480_1 lane4_3600STDY6184428_CTTCTAGA_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184429_AACGGCTT_L004_17480_1 lane4_3600STDY6184430_ATAAGACT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184431_GTTTTTCG_L004_17480_1 lane4_3600STDY6184432_ATTGGTAT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184433_CGCCAGTA_L004_17480_1 lane4_3600STDY6184434_AAGCCGAA_L004_17480_1 
#>                                      "0223"                                       "032" 
#> lane4_3600STDY6184435_TGACCCAC_L004_17480_1 lane4_3600STDY6184436_ATTGCACA_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184437_CTTTTGAT_L004_17480_1 lane4_3600STDY6184438_TAGCGAGA_L004_17480_1 
#>                                      "0213"                                      "0222" 
#> lane4_3600STDY6184439_TTCGCAGG_L004_17480_1 lane4_3600STDY6184440_TAGTTATT_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184441_TCCTCCGA_L004_17480_1 lane4_3600STDY6184442_GCGGGTCT_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184443_GATTCTAT_L004_17480_1 lane4_3600STDY6184444_ATGCAAAG_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184445_GTCTGAGG_L004_17480_1 lane4_3600STDY6184446_TCTGGCGA_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184447_AATTTGCG_L004_17480_1 lane4_3600STDY6184448_TGGGTTGG_L004_17480_1 
#>                                      "0222"                                      "0232" 
#> lane4_3600STDY6184449_AGTTGAAA_L004_17480_1 lane4_3600STDY6184450_GACCGGAA_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184451_GATCGAAC_L004_17480_1 lane4_3600STDY6184452_GTATAGGG_L004_17480_1 
#>                                     "03422"                                      "0341" 
#> lane4_3600STDY6184453_GGTAAGAG_L004_17480_1 lane4_3600STDY6184454_AGTCCGAT_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184455_ATACAGGC_L004_17480_1 lane4_3600STDY6184456_TGAGACTC_L004_17480_1 
#>                                      "0213"                                      "0222" 
#> lane4_3600STDY6184457_ACTCAGGA_L004_17480_1 lane4_3600STDY6184458_GTGTCTGA_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184459_CTTGAATC_L004_17480_1 lane4_3600STDY6184460_CCGCATGA_L004_17480_1 
#>                                      "0211"                                      "0222" 
#> lane4_3600STDY6184461_AAGTAACA_L004_17480_1 lane4_3600STDY6184462_GTGGTACT_L004_17480_1 
#>                                      "0222"                                      "0222" 
#> lane4_3600STDY6184463_AGCTGTGC_L004_17480_1 lane4_3600STDY6184464_TTACCTTC_L004_17480_1 
#>                                      "0222"                                      "0222" 
#> lane4_3600STDY6184465_TCCGGGTA_L004_17480_1 lane4_3600STDY6184466_CTACGTAA_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184467_TCGGACCG_L004_17480_1 lane4_3600STDY6184468_ATGCGTCG_L004_17480_1 
#>                                      "0211"                                       "032" 
#> lane4_3600STDY6184469_TTCTTAGC_L004_17480_1 lane4_3600STDY6184470_TGAGTAAG_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184471_AAGTGATA_L004_17480_1 lane4_3600STDY6184472_TCGATGCG_L004_17480_1 
#>                                      "0213"                                      "0341" 
#> lane4_3600STDY6184473_TATTCTGG_L004_17480_1 lane4_3600STDY6184474_AGCCGTGA_L004_17480_1 
#>                                      "0213"                                      "0211" 
#> lane4_3600STDY6184475_AAGCCTTC_L004_17480_1 lane4_3600STDY6184476_AGGTATCC_L004_17480_1 
#>                                      "0213"                                      "0341" 
#> lane4_3600STDY6184477_AGGATCTC_L004_17480_1 lane4_3600STDY6184478_CTGTTTGA_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184479_GGAATTTC_L004_17480_1 lane4_3600STDY6184480_TTGGAGCA_L004_17480_1 
#>                                      "0341"                                      "0213" 
#> lane4_3600STDY6184481_AAGGTCTG_L004_17480_1 lane4_3600STDY6184482_AATTAGGC_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184483_AATCGGGT_L004_17480_1 lane4_3600STDY6184484_AGGTAGAC_L004_17480_1 
#>                                      "0212"                                      "0212" 
#> lane4_3600STDY6184485_CTTATTCC_L004_17480_1 lane4_3600STDY6184486_CAGGCTCT_L004_17480_1 
#>                                      "0341"                                      "0222" 
#> lane4_3600STDY6184487_AAAGCACG_L004_17480_1 lane4_3600STDY6184488_GTATACAC_L004_17480_1 
#>                                      "0222"                                      "0211" 
#> lane4_3600STDY6184489_GGACATAT_L004_17480_1 lane4_3600STDY6184490_CGGTTGGG_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184491_GTCCGTGA_L004_17480_1 lane4_3600STDY6184492_GCCGAACC_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184493_ACTTTACT_L004_17480_1 lane4_3600STDY6184494_GGGTCCAT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184495_ATAACTAG_L004_17480_1 lane4_3600STDY6184496_AATAGAGA_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184497_TCACCATT_L004_17480_1 lane4_3600STDY6184498_CGCCTGAT_L004_17480_1 
#>                                      "0341"                                      "0222" 
#> lane4_3600STDY6184499_GCGTGAAC_L004_17480_1 lane4_3600STDY6184500_TAAGGGTG_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184501_GGTGTCGA_L004_17480_1 lane4_3600STDY6184502_CCGTTAGG_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184503_TGGCAAAA_L004_17480_1 lane4_3600STDY6184504_CCTACCCG_L004_17480_1 
#>                                      "0213"                                      "0222" 
#> lane4_3600STDY6184505_AACAGCGC_L004_17480_1 lane4_3600STDY6184506_TATACATC_L004_17480_1 
#>                                      "0213"                                      "0341" 
#> lane4_3600STDY6184507_AAGCGACT_L004_17480_1 lane4_3600STDY6184508_GAAGCGCA_L004_17480_1 
#>                                      "0211"                                      "0222" 
#> lane4_3600STDY6184509_ACCTCTAC_L004_17480_1 lane4_3600STDY6184510_GATTGCGT_L004_17480_1 
#>                                      "0222"                                      "0232" 
#> lane4_3600STDY6184511_GCTGGTTG_L004_17480_1 lane4_3600STDY6184512_ATCGTCCT_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184513_GGACACGG_L004_17480_1 lane4_3600STDY6184514_CGCACCTA_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184515_CTTCGGCT_L004_17480_1 lane4_3600STDY6184516_CGAATCGA_L004_17480_1 
#>                                      "0212"                                       "032" 
#> lane4_3600STDY6184517_TAACAACT_L004_17480_1 lane4_3600STDY6184518_AGCTCTTT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184519_TAATCCCT_L004_17480_1 lane4_3600STDY6184520_AGGACACT_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184521_TTACACTA_L004_17480_1 lane4_3600STDY6184522_AAACATCA_L004_17480_1 
#>                                      "0341"                                      "0213" 
#> lane4_3600STDY6184523_CCATAGCT_L004_17480_1 lane4_3600STDY6184524_GTTATGGC_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184525_ATCCCCTA_L004_17480_1 lane4_3600STDY6184526_CATACTAC_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184527_CAATTGTT_L004_17480_1 lane4_3600STDY6184528_AAACCCGT_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184529_CAGATTTC_L004_17480_1 lane4_3600STDY6184530_GCGTAGGT_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184531_GGCATTCG_L004_17480_1 lane4_3600STDY6184532_TGGGGCTT_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184533_CTGACTAC_L004_17480_1 lane4_3600STDY6184534_AACTTTTA_L004_17480_1 
#>                                      "0212"                                      "0211" 
#> lane4_3600STDY6184535_AGGGATTC_L004_17480_1 lane4_3600STDY6184536_CCGAGTAG_L004_17480_1 
#>                                      "0221"                                      "0212" 
#> lane4_3600STDY6184537_GGGGACTA_L004_17480_1 lane4_3600STDY6184538_GGAGTTGA_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184539_AGCTCATC_L004_17480_1 lane4_3600STDY6184540_TAATCAAC_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184541_ACTGGTCG_L004_17480_1 lane4_3600STDY6184542_GACGATTG_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184543_AGCGATGA_L004_17480_1 lane4_3600STDY6184544_GAAGAGAT_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184545_CGTATGCA_L004_17480_1 lane4_3600STDY6184546_CACGTGCG_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184547_GCTTAAAC_L004_17480_1 lane4_3600STDY6184548_GTTCCGCA_L004_17480_1 
#>                                       "032"                                      "0221" 
#> lane4_3600STDY6184549_GTATCGTC_L004_17480_1 lane4_3600STDY6184550_GTCCTCAC_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184551_GTACGGAC_L004_17480_1 lane4_3600STDY6184552_CATTTTGC_L004_17480_1 
#>                                      "0221"                                      "0221" 
#> lane4_3600STDY6184553_TCCTCTCT_L004_17480_1 lane4_3600STDY6184554_AGCAACGA_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184555_ACAGAAGA_L004_17480_1 lane4_3600STDY6184556_CGACCCTT_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184557_CTGCCTAG_L004_17480_1 lane4_3600STDY6184558_GAGCGCAT_L004_17480_1 
#>                                      "0212"                                      "0222" 
#> lane4_3600STDY6184559_AACTTATC_L004_17480_1 lane4_3600STDY6184560_CCGATGTA_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184561_TTACTACC_L004_17480_1 lane4_3600STDY6184562_CAAGGAGC_L004_17480_1 
#>                                      "0341"                                      "0221" 
#> lane4_3600STDY6184563_TGGTTGAC_L004_17480_1 lane4_3600STDY6184564_ACCTGCTG_L004_17480_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6183797_ATCACGTT_L001_17592_1 lane1_3600STDY6183798_CGATGTTT_L001_17592_1 
#>                                      "0221"                                      "0312" 
#> lane1_3600STDY6183799_TTAGGCAT_L001_17592_1 lane1_3600STDY6183800_TGACCACT_L001_17592_1 
#>                                      "0312"                                      "0312" 
#> lane1_3600STDY6183801_ACAGTGGT_L001_17592_1 lane1_3600STDY6183802_GCCAATGT_L001_17592_1 
#>                                      "0312"                                      "0312" 
#> lane1_3600STDY6183803_CAGATCTG_L001_17592_1 lane1_3600STDY6183804_ACTTGATG_L001_17592_1 
#>                                      "0312"                                      "0311" 
#> lane1_3600STDY6183805_GATCAGCG_L001_17592_1 lane1_3600STDY6183806_TAGCTTGT_L001_17592_1 
#>                                      "0312"                                      "0312" 
#> lane1_3600STDY6183807_GGCTACAG_L001_17592_1 lane1_3600STDY6183808_CTTGTACT_L001_17592_1 
#>                                      "0312"                                      "0223" 
#> lane1_3600STDY6183809_TGGTTGTT_L001_17592_1 lane1_3600STDY6183810_TCTCGGTT_L001_17592_1 
#>                                      "0311"                                      "0221" 
#> lane1_3600STDY6183811_TAAGCGTT_L001_17592_1 lane1_3600STDY6183812_TCCGTCTT_L001_17592_1 
#>                                      "0312"                                      "0313" 
#> lane1_3600STDY6183813_TGTACCTT_L001_17592_1 lane1_3600STDY6183814_TTCTGTGT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183815_TCTGCTGT_L001_17592_1 lane1_3600STDY6183816_TTGGAGGT_L001_17592_1 
#>                                       "033"                                      "0221" 
#> lane1_3600STDY6183817_TCGAGCGT_L001_17592_1 lane1_3600STDY6183818_TGATACGT_L001_17592_1 
#>                                      "0311"                                      "0311" 
#> lane1_3600STDY6183819_TGCATAGT_L001_17592_1 lane1_3600STDY6183820_TTGACTCT_L001_17592_1 
#>                                      "0313"                                      "0221" 
#> lane1_3600STDY6183821_TGCGATCT_L001_17592_1 lane1_3600STDY6183822_TTCCTGCT_L001_17592_1 
#>                                      "0312"                                       "033" 
#> lane1_3600STDY6183823_TAGTGACT_L001_17592_1 lane1_3600STDY6183824_TACAGGAT_L001_17592_1 
#>                                      "0312"                                      "0312" 
#> lane1_3600STDY6183825_TCCTCAAT_L001_17592_1 lane1_3600STDY6183826_TGTGGTTG_L001_17592_1 
#>                                      "0312"                                      "0312" 
#> lane1_3600STDY6183827_TAGTCTTG_L001_17592_1 lane1_3600STDY6183828_TTCCATTG_L001_17592_1 
#>                                      "0312"                                      "0312" 
#> lane1_3600STDY6183829_TCGAAGTG_L001_17592_1 lane1_3600STDY6183830_TAACGCTG_L001_17592_1 
#>                                      "0312"                                      "0312" 
#> lane1_3600STDY6183831_TTGGTATG_L001_17592_1 lane1_3600STDY6183832_TGAACTGG_L001_17592_1 
#>                                      "0312"                                      "0312" 
#> lane1_3600STDY6183833_TACTTCGG_L001_17592_1 lane1_3600STDY6183834_TCTCACGG_L001_17592_1 
#>                                      "0311"                                      "0312" 
#> lane1_3600STDY6183835_TCAGGAGG_L001_17592_1 lane1_3600STDY6183836_TAAGTTCG_L001_17592_1 
#>                                      "0313"                                      "0311" 
#> lane1_3600STDY6183837_TCCAGTCG_L001_17592_1 lane1_3600STDY6183838_TGTATGCG_L001_17592_1 
#>                                      "0311"                                       "033" 
#> lane1_3600STDY6183839_TCATTGAG_L001_17592_1 lane1_3600STDY6183840_TGGCTCAG_L001_17592_1 
#>                                      "0231"                                       "033" 
#> lane1_3600STDY6183841_TATGCCAG_L001_17592_1 lane1_3600STDY6183842_TCAGATTC_L001_17592_1 
#>                                      "0231"                                      "0311" 
#> lane1_3600STDY6183843_TACTAGTC_L001_17592_1 lane1_3600STDY6183844_TTCAGCTC_L001_17592_1 
#>                                      "0313"                                      "0313" 
#> lane1_3600STDY6183845_TGTCTATC_L001_17592_1 lane1_3600STDY6183846_TATGTGGC_L001_17592_1 
#>                                      "0312"                                      "0312" 
#> lane1_3600STDY6183847_TTACTCGC_L001_17592_1 lane1_3600STDY6183848_TCGTTAGC_L001_17592_1 
#>                                       "033"                                      "0311" 
#> lane1_3600STDY6183849_TACCGAGC_L001_17592_1 lane1_3600STDY6183850_TGTTCTCC_L001_17592_1 
#>                                      "0312"                                      "0311" 
#> lane1_3600STDY6183851_TTCGCACC_L001_17592_1 lane1_3600STDY6183852_TTGCGTAC_L001_17592_1 
#>                                      "0312"                                      "0312" 
#> lane1_3600STDY6183853_TCTACGAC_L001_17592_1 lane1_3600STDY6183854_TGACAGAC_L001_17592_1 
#>                                      "0311"                                      "0312" 
#> lane1_3600STDY6183855_TAGAACAC_L001_17592_1 lane1_3600STDY6183856_TCATCCTA_L001_17592_1 
#>                                      "0311"                                      "0312" 
#> lane1_3600STDY6183857_TGCTGATA_L001_17592_1 lane1_3600STDY6183858_TAGACGGA_L001_17592_1 
#>                                      "0232"                                       "033" 
#> lane1_3600STDY6183859_TGTGAAGA_L001_17592_1 lane1_3600STDY6183860_TCTCTTCA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183861_TTGTTCCA_L001_17592_1 lane1_3600STDY6183862_TGAAGCCA_L001_17592_1 
#>                                      "0311"                                       "033" 
#> lane1_3600STDY6183863_TACCACCA_L001_17592_1 lane1_3600STDY6183864_TGCGTGAA_L001_17592_1 
#>                                       "033"                                      "0232" 
#> lane1_3600STDY6183865_GGTGAGTT_L001_17592_1 lane1_3600STDY6183866_GATCTCTT_L001_17592_1 
#>                                      "0231"                                      "0311" 
#> lane1_3600STDY6183867_GTGTCCTT_L001_17592_1 lane1_3600STDY6183868_GACGGATT_L001_17592_1 
#>                                      "0313"                                       "033" 
#> lane1_3600STDY6183869_GCAACATT_L001_17592_1 lane1_3600STDY6183870_GGTCGTGT_L001_17592_1 
#>                                      "0312"                                      "0311" 
#> lane1_3600STDY6183871_GAATCTGT_L001_17592_1 lane1_3600STDY6183872_GTACATCT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183873_GAGGTGCT_L001_17592_1 lane1_3600STDY6183874_GCATGGCT_L001_17592_1 
#>                                      "0311"                                      "0231" 
#> lane1_3600STDY6183875_GTTAGCCT_L001_17592_1 lane1_3600STDY6183876_GTCGCTAT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183877_GGAATGAT_L001_17592_1 lane1_3600STDY6183878_GAGCCAAT_L001_17592_1 
#>                                      "0313"                                      "0312" 
#> lane1_3600STDY6183879_GCTCCTTG_L001_17592_1 lane1_3600STDY6183880_GTAAGGTG_L001_17592_1 
#>                                       "033"                                      "0311" 
#> lane1_3600STDY6183881_GAGGATGG_L001_17592_1 lane1_3600STDY6183882_GTTGTCGG_L001_17592_1 
#>                                      "0232"                                      "0231" 
#> lane1_3600STDY6183883_GGATTAGG_L001_17592_1 lane1_3600STDY6183884_GATAGAGG_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6183885_GTGTGTCG_L001_17592_1 lane1_3600STDY6183886_GCAATCCG_L001_17592_1 
#>                                      "0232"                                      "0222" 
#> lane1_3600STDY6183887_GACCTTAG_L001_17592_1 lane1_3600STDY6183888_GCCTGTTC_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6183889_GCACTGTC_L001_17592_1 lane1_3600STDY6183890_GCTAACTC_L001_17592_1 
#>                                      "0232"                                       "033" 
#> lane1_3600STDY6183891_GATTCATC_L001_17592_1 lane1_3600STDY6183892_GTCTTGGC_L001_17592_1 
#>                                      "0231"                                       "033" 
#> lane1_3600STDY6183893_GTAGAAGC_L001_17592_1 lane1_3600STDY6183894_GATGGTCC_L001_17592_1 
#>                                      "0312"                                      "0311" 
#> lane1_3600STDY6183895_GTGCTACC_L001_17592_1 lane1_3600STDY6183896_GCGATTAC_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183897_GGTTGGAC_L001_17592_1 lane1_3600STDY6183898_GGCACAAC_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6183899_GACACTTA_L001_17592_1 lane1_3600STDY6183900_GTGCAGTA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183901_GGAGTCTA_L001_17592_1 lane1_3600STDY6183902_GCTATGGA_L001_17592_1 
#>                                      "0311"                                      "0311" 
#> lane1_3600STDY6183903_GAGTGCGA_L001_17592_1 lane1_3600STDY6183904_GTAACCGA_L001_17592_1 
#>                                       "033"                                      "0311" 
#> lane1_3600STDY6183905_GGCAAGCA_L001_17592_1 lane1_3600STDY6183906_GCCTTACA_L001_17592_1 
#>                                      "0232"                                       "033" 
#> lane1_3600STDY6183907_GAACGACA_L001_17592_1 lane1_3600STDY6183908_GCAGGTAA_L001_17592_1 
#>                                       "033"                                      "0232" 
#> lane1_3600STDY6183909_GCGTCGAA_L001_17592_1 lane1_3600STDY6183910_CGTTCGGT_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6183911_CACCAGGT_L001_17592_1 lane1_3600STDY6183912_CTGCGAGT_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6183913_CCGTATCT_L001_17592_1 lane1_3600STDY6183914_CGCTTCCT_L001_17592_1 
#>                                      "0232"                                      "0231" 
#> lane1_3600STDY6183915_CAAGACCT_L001_17592_1 lane1_3600STDY6183916_CACACACT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183917_CCTAGTAT_L001_17592_1 lane1_3600STDY6183918_CCACCGAT_L001_17592_1 
#>                                      "0312"                                      "0312" 
#> lane1_3600STDY6183919_CTTCACAT_L001_17592_1 lane1_3600STDY6183920_CTATCATG_L001_17592_1 
#>                                       "033"                                      "0312" 
#> lane1_3600STDY6183921_CATGAATG_L001_17592_1 lane1_3600STDY6183922_CCACTTGG_L001_17592_1 
#>                                      "0311"                                       "033" 
#> lane1_3600STDY6183923_CTGTACGG_L001_17592_1 lane1_3600STDY6183924_CTAGATAG_L001_17592_1 
#>                                      "0311"                                       "033" 
#> lane1_3600STDY6183925_CACTCGAG_L001_17592_1 lane1_3600STDY6183926_CCGACAAG_L001_17592_1 
#>                                      "0311"                                      "0312" 
#> lane1_3600STDY6183927_CTTGCTTC_L001_17592_1 lane1_3600STDY6183928_CATAGGTC_L001_17592_1 
#>                                      "0232"                                      "0212" 
#> lane1_3600STDY6183929_CACATTGC_L001_17592_1 lane1_3600STDY6183930_CGCTAAGC_L001_17592_1 
#>                                      "0232"                                       "033" 
#> lane1_3600STDY6183931_CAACCTCC_L001_17592_1 lane1_3600STDY6183932_CAGCTGAC_L001_17592_1 
#>                                       "033"                                      "0232" 
#> lane1_3600STDY6183933_CTCAAGAC_L001_17592_1 lane1_3600STDY6183934_CGTGTCAC_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6183935_CCATGCAC_L001_17592_1 lane1_3600STDY6183936_CGTTACTA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183937_CAAGTAGA_L001_17592_1 lane1_3600STDY6183938_CTCTCTCA_L001_17592_1 
#>                                       "033"                                      "0313" 
#> lane1_3600STDY6183939_CGACTGCA_L001_17592_1 lane1_3600STDY6183940_CCTGAGCA_L001_17592_1 
#>                                       "033"                                      "0313" 
#> lane1_3600STDY6183941_CAGGCTAA_L001_17592_1 lane1_3600STDY6183942_CGGAGGAA_L001_17592_1 
#>                                      "0312"                                       "033" 
#> lane1_3600STDY6183943_AGGAGATT_L001_17592_1 lane1_3600STDY6183944_AGGCAGCT_L001_17592_1 
#>                                      "0311"                                      "0213" 
#> lane1_3600STDY6183945_ACGTTCAT_L001_17592_1 lane1_3600STDY6183946_AACGTGTG_L001_17592_1 
#>                                       "033"                                      "0312" 
#> lane1_3600STDY6183947_AGACCGTG_L001_17592_1 lane1_3600STDY6183948_ACCTCTGG_L001_17592_1 
#>                                      "0312"                                      "0311" 
#> lane1_3600STDY6183949_ATCCTAGG_L001_17592_1 lane1_3600STDY6183950_ATCAACCG_L001_17592_1 
#>                                      "0313"                                      "0312" 
#> lane1_3600STDY6183951_AGGTCACG_L001_17592_1 lane1_3600STDY6183952_ACTGTTAG_L001_17592_1 
#>                                      "0311"                                      "0221" 
#> lane1_3600STDY6183953_AAGAGTAG_L001_17592_1 lane1_3600STDY6183954_ATTCGGAG_L001_17592_1 
#>                                      "0231"                                      "0313" 
#> lane1_3600STDY6183955_ACGCAATC_L001_17592_1 lane1_3600STDY6183956_ACAAGTGC_L001_17592_1 
#>                                       "033"                                      "0232" 
#> lane1_3600STDY6183957_ATGGATCC_L001_17592_1 lane1_3600STDY6183958_AGAGGACC_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6183959_ATCTCCAC_L001_17592_1 lane1_3600STDY6183960_ATTGGCTA_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6183961_AATCCTGA_L001_17592_1 lane1_3600STDY6183962_AGGATTCA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183963_AACTGGCA_L001_17592_1 lane1_3600STDY6183964_ACAACGCA_L001_17592_1 
#>                                       "033"                                      "0223" 
#> lane1_3600STDY6183965_CGGAAACA_L001_17592_1 lane1_3600STDY6183966_AATGAATT_L001_17592_1 
#>                                      "0222"                                       "033" 
#> lane1_3600STDY6183967_TAGGACCC_L001_17592_1 lane1_3600STDY6183968_TCTCAGTG_L001_17592_1 
#>                                      "0311"                                       "033" 
#> lane1_3600STDY6183969_CATGGGAA_L001_17592_1 lane1_3600STDY6183970_CCTAAGAT_L001_17592_1 
#>                                      "0311"                                      "0232" 
#> lane1_3600STDY6183971_CTCAGATA_L001_17592_1 lane1_3600STDY6183972_CCCATAGG_L001_17592_1 
#>                                      "0311"                                       "033" 
#> lane1_3600STDY6183973_GCTATGAC_L001_17592_1 lane1_3600STDY6183974_GCTGTGAA_L001_17592_1 
#>                                      "0311"                                      "0311" 
#> lane1_3600STDY6183975_ACCTTCAA_L001_17592_1 lane1_3600STDY6183976_ACAAAGCC_L001_17592_1 
#>                                      "0231"                                      "0211" 
#> lane1_3600STDY6183977_CAAAACCG_L001_17592_1 lane1_3600STDY6183978_GCTGGACA_L001_17592_1 
#>                                      "0232"                                      "0231" 
#> lane1_3600STDY6183979_AAGTCGTA_L001_17592_1 lane1_3600STDY6183980_CATCCGTA_L001_17592_1 
#>                                      "0232"                                      "0231" 
#> lane1_3600STDY6183981_TTGTGTCT_L001_17592_1 lane1_3600STDY6183982_TGCTCTAG_L001_17592_1 
#>                                      "0231"                                      "0232" 
#> lane1_3600STDY6183983_ACCCAACA_L001_17592_1 lane1_3600STDY6183984_CGATCTGA_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6183985_GTTCCACG_L001_17592_1 lane1_3600STDY6183986_ACTCTTTC_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6183987_TATTGGAG_L001_17592_1 lane1_3600STDY6183988_TAAACATA_L001_17592_1 
#>                                      "0231"                                      "0221" 
#> lane1_3600STDY6183989_GTAAGATA_L001_17592_1 lane1_3600STDY6183990_TACCGCAA_L001_17592_1 
#>                                      "0221"                                      "0312" 
#> lane1_3600STDY6183991_TATCTCCT_L001_17592_1 lane1_3600STDY6183992_TGTCATCT_L001_17592_1 
#>                                      "0311"                                      "0231" 
#> lane1_3600STDY6183993_ATAGCTCT_L001_17592_1 lane1_3600STDY6183994_AGTCCAAC_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6183995_TTTGGGCA_L001_17592_1 lane1_3600STDY6183996_TCTGACGC_L001_17592_1 
#>                                      "0311"                                      "0231" 
#> lane1_3600STDY6183997_TGTCGACT_L001_17592_1 lane1_3600STDY6183998_GTCACGTA_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6183999_TTGAGCGA_L001_17592_1 lane1_3600STDY6184000_GAGACATA_L001_17592_1 
#>                                      "0231"                                      "0313" 
#> lane1_3600STDY6184001_GTCAAGCT_L001_17592_1 lane1_3600STDY6184002_AGCAAGTT_L001_17592_1 
#>                                      "0221"                                      "0312" 
#> lane1_3600STDY6184003_GACGCTCA_L001_17592_1 lane1_3600STDY6184004_ACGGCAGC_L001_17592_1 
#>                                      "0313"                                      "0312" 
#> lane1_3600STDY6184005_AGAACTGA_L001_17592_1 lane1_3600STDY6184006_CGCCTTTG_L001_17592_1 
#>                                      "0313"                                      "0311" 
#> lane1_3600STDY6184007_TAAGGTCA_L001_17592_1 lane1_3600STDY6184008_ACGTTGGC_L001_17592_1 
#>                                       "033"                                      "0311" 
#> lane1_3600STDY6184009_CCAGCTTA_L001_17592_1 lane1_3600STDY6184010_GAATCCTA_L001_17592_1 
#>                                      "0311"                                      "0311" 
#> lane1_3600STDY6184011_ACTTCGTA_L001_17592_1 lane1_3600STDY6184012_TAGTCGGT_L001_17592_1 
#>                                      "0223"                                      "0313" 
#> lane1_3600STDY6184013_CGCACGAG_L001_17592_1 lane1_3600STDY6184014_ACGTACTA_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6184015_AGCGCCAA_L001_17592_1 lane1_3600STDY6184016_GCCTGCCC_L001_17592_1 
#>                                      "0311"                                      "0231" 
#> lane1_3600STDY6184017_AGGACGAT_L001_17592_1 lane1_3600STDY6184018_CTTGACCG_L001_17592_1 
#>                                      "0311"                                      "0231" 
#> lane1_3600STDY6184019_AGGTCTAA_L001_17592_1 lane1_3600STDY6184020_CGAGATCC_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6184021_ATTAGCGG_L001_17592_1 lane1_3600STDY6184022_GCGCTGAT_L001_17592_1 
#>                                      "0311"                                      "0231" 
#> lane1_3600STDY6184023_TGCTGAAC_L001_17592_1 lane1_3600STDY6184024_GAGGGCAG_L001_17592_1 
#>                                      "0221"                                      "0313" 
#> lane1_3600STDY6184025_GTTTTCAC_L001_17592_1 lane1_3600STDY6184026_GAGATGCC_L001_17592_1 
#>                                      "0313"                                      "0311" 
#> lane1_3600STDY6184027_TTGAGAAG_L001_17592_1 lane1_3600STDY6184028_GCATCCGG_L001_17592_1 
#>                                      "0313"                                      "0311" 
#> lane1_3600STDY6184029_GTCACCAG_L001_17592_1 lane1_3600STDY6184030_GAGGTCGC_L001_17592_1 
#>                                      "0313"                                       "033" 
#> lane1_3600STDY6184031_AAGGGGTA_L001_17592_1 lane1_3600STDY6184032_TTTTACGT_L001_17592_1 
#>                                       "033"                                      "0311" 
#> lane1_3600STDY6184033_TTCCTACA_L001_17592_1 lane1_3600STDY6184034_AGTGTAGT_L001_17592_1 
#>                                      "0311"                                      "0231" 
#> lane1_3600STDY6184035_GTGGCCAA_L001_17592_1 lane1_3600STDY6184036_AAATACTC_L001_17592_1 
#>                                      "0311"                                      "0312" 
#> lane1_3600STDY6184037_CACCCGTC_L001_17592_1 lane1_3600STDY6184038_TCGTGGTT_L001_17592_1 
#>                                      "0311"                                       "033" 
#> lane1_3600STDY6184039_ACTTGGGG_L001_17592_1 lane1_3600STDY6184040_GGCTGCTT_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6184041_CAGGGTCG_L001_17592_1 lane1_3600STDY6184042_CTCGTCGA_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6184043_TCTACAGT_L001_17592_1 lane1_3600STDY6184044_CTTCTAGA_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6184045_AACGGCTT_L001_17592_1 lane1_3600STDY6184046_ATAAGACT_L001_17592_1 
#>                                      "0311"                                      "0231" 
#> lane1_3600STDY6184047_GTTTTTCG_L001_17592_1 lane1_3600STDY6184048_ATTGGTAT_L001_17592_1 
#>                                      "0231"                                      "0311" 
#> lane1_3600STDY6184049_CGCCAGTA_L001_17592_1 lane1_3600STDY6184050_AAGCCGAA_L001_17592_1 
#>                                      "0311"                                      "0311" 
#> lane1_3600STDY6184051_TGACCCAC_L001_17592_1 lane1_3600STDY6184052_ATTGCACA_L001_17592_1 
#>                                      "0231"                                      "0311" 
#> lane1_3600STDY6184053_CTTTTGAT_L001_17592_1 lane1_3600STDY6184054_TAGCGAGA_L001_17592_1 
#>                                      "0313"                                       "033" 
#> lane1_3600STDY6184055_TTCGCAGG_L001_17592_1 lane1_3600STDY6184056_TAGTTATT_L001_17592_1 
#>                                      "0311"                                       "033" 
#> lane1_3600STDY6184057_TCCTCCGA_L001_17592_1 lane1_3600STDY6184058_GCGGGTCT_L001_17592_1 
#>                                      "0313"                                      "0231" 
#> lane1_3600STDY6184059_GATTCTAT_L001_17592_1 lane1_3600STDY6184060_ATGCAAAG_L001_17592_1 
#>                                      "0311"                                      "0313" 
#> lane1_3600STDY6184061_GTCTGAGG_L001_17592_1 lane1_3600STDY6184062_TCTGGCGA_L001_17592_1 
#>                                      "0231"                                      "0232" 
#> lane1_3600STDY6184063_AATTTGCG_L001_17592_1 lane1_3600STDY6184064_TGGGTTGG_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6184065_AGTTGAAA_L001_17592_1 lane1_3600STDY6184066_GACCGGAA_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6184067_GATCGAAC_L001_17592_1 lane1_3600STDY6184068_GTATAGGG_L001_17592_1 
#>                                      "0222"                                      "0222" 
#> lane1_3600STDY6184069_GGTAAGAG_L001_17592_1 lane1_3600STDY6184070_AGTCCGAT_L001_17592_1 
#>                                     "03422"                                      "0232" 
#> lane1_3600STDY6184071_ATACAGGC_L001_17592_1 lane1_3600STDY6184072_TGAGACTC_L001_17592_1 
#>                                      "0232"                                       "033" 
#> lane1_3600STDY6184073_ACTCAGGA_L001_17592_1 lane1_3600STDY6184074_GTGTCTGA_L001_17592_1 
#>                                       "033"                                      "0313" 
#> lane1_3600STDY6184075_CTTGAATC_L001_17592_1 lane1_3600STDY6184076_CCGCATGA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184077_AAGTAACA_L001_17592_1 lane1_3600STDY6184078_GTGGTACT_L001_17592_1 
#>                                       "033"                                      "0232" 
#> lane1_3600STDY6184079_AGCTGTGC_L001_17592_1 lane1_3600STDY6184080_TTACCTTC_L001_17592_1 
#>                                      "0222"                                       "033" 
#> lane1_3600STDY6184081_TCCGGGTA_L001_17592_1 lane1_3600STDY6184082_CTACGTAA_L001_17592_1 
#>                                      "0231"                                      "0232" 
#> lane1_3600STDY6184083_TCGGACCG_L001_17592_1 lane1_3600STDY6184084_ATGCGTCG_L001_17592_1 
#>                                       "033"                                      "0313" 
#> lane1_3600STDY6184085_TTCTTAGC_L001_17592_1 lane1_3600STDY6184086_TGAGTAAG_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6184087_AAGTGATA_L001_17592_1 lane1_3600STDY6184088_TCGATGCG_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6184089_TATTCTGG_L001_17592_1 lane1_3600STDY6184090_AGCCGTGA_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6184091_AAGCCTTC_L001_17592_1 lane1_3600STDY6184092_AGGTATCC_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6184093_AGGATCTC_L001_17592_1 lane1_3600STDY6184094_CTGTTTGA_L001_17592_1 
#>                                       "033"                                      "0232" 
#> lane1_3600STDY6184095_GGAATTTC_L001_17592_1 lane1_3600STDY6184096_TTGGAGCA_L001_17592_1 
#>                                      "0231"                                      "0313" 
#> lane1_3600STDY6184097_AAGGTCTG_L001_17592_1 lane1_3600STDY6184098_AATTAGGC_L001_17592_1 
#>                                      "0311"                                       "033" 
#> lane1_3600STDY6184099_AATCGGGT_L001_17592_1 lane1_3600STDY6184100_AGGTAGAC_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184101_CTTATTCC_L001_17592_1 lane1_3600STDY6184102_CAGGCTCT_L001_17592_1 
#>                                       "033"                                      "0232" 
#> lane1_3600STDY6184103_AAAGCACG_L001_17592_1 lane1_3600STDY6184104_GTATACAC_L001_17592_1 
#>                                      "0232"                                      "0231" 
#> lane1_3600STDY6184105_GGACATAT_L001_17592_1 lane1_3600STDY6184106_CGGTTGGG_L001_17592_1 
#>                                      "0222"                                      "0231" 
#> lane1_3600STDY6184107_GTCCGTGA_L001_17592_1 lane1_3600STDY6184108_GCCGAACC_L001_17592_1 
#>                                       "033"                                      "0313" 
#> lane1_3600STDY6184109_ACTTTACT_L001_17592_1 lane1_3600STDY6184110_GGGTCCAT_L001_17592_1 
#>                                       "033"                                      "0311" 
#> lane1_3600STDY6184111_ATAACTAG_L001_17592_1 lane1_3600STDY6184112_AATAGAGA_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6184113_TCACCATT_L001_17592_1 lane1_3600STDY6184114_CGCCTGAT_L001_17592_1 
#>                                      "0231"                                      "0232" 
#> lane1_3600STDY6184115_GCGTGAAC_L001_17592_1 lane1_3600STDY6184116_TAAGGGTG_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6184117_GGTGTCGA_L001_17592_1 lane1_3600STDY6184118_CCGTTAGG_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184119_TGGCAAAA_L001_17592_1 lane1_3600STDY6184120_CCTACCCG_L001_17592_1 
#>                                      "0231"                                      "0313" 
#> lane1_3600STDY6184121_AACAGCGC_L001_17592_1 lane1_3600STDY6184122_TATACATC_L001_17592_1 
#>                                      "0311"                                      "0313" 
#> lane1_3600STDY6184123_AAGCGACT_L001_17592_1 lane1_3600STDY6184124_GAAGCGCA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184125_ACCTCTAC_L001_17592_1 lane1_3600STDY6184126_GATTGCGT_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6184127_GCTGGTTG_L001_17592_1 lane1_3600STDY6184128_ATCGTCCT_L001_17592_1 
#>                                       "033"                                      "0312" 
#> lane1_3600STDY6184129_GGACACGG_L001_17592_1 lane1_3600STDY6184130_CGCACCTA_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6184131_CTTCGGCT_L001_17592_1 lane1_3600STDY6184132_CGAATCGA_L001_17592_1 
#>                                      "0313"                                      "0222" 
#> lane1_3600STDY6184133_TAACAACT_L001_17592_1 lane1_3600STDY6184134_AGCTCTTT_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6184135_TAATCCCT_L001_17592_1 lane1_3600STDY6184136_AGGACACT_L001_17592_1 
#>                                      "0231"                                      "0232" 
#> lane1_3600STDY6184137_TTACACTA_L001_17592_1 lane1_3600STDY6184138_AAACATCA_L001_17592_1 
#>                                       "033"                                      "0232" 
#> lane1_3600STDY6184139_CCATAGCT_L001_17592_1 lane1_3600STDY6184140_GTTATGGC_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6184141_ATCCCCTA_L001_17592_1 lane1_3600STDY6184142_CATACTAC_L001_17592_1 
#>                                      "0232"                                       "033" 
#> lane1_3600STDY6184143_CAATTGTT_L001_17592_1 lane1_3600STDY6184144_AAACCCGT_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6184145_CAGATTTC_L001_17592_1 lane1_3600STDY6184146_GCGTAGGT_L001_17592_1 
#>                                      "0311"                                      "0311" 
#> lane1_3600STDY6184147_GGCATTCG_L001_17592_1 lane1_3600STDY6184148_TGGGGCTT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184149_CTGACTAC_L001_17592_1 lane1_3600STDY6184150_AACTTTTA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184151_AGGGATTC_L001_17592_1 lane1_3600STDY6184152_CCGAGTAG_L001_17592_1 
#>                                      "0231"                                       "033" 
#> lane1_3600STDY6184153_GGGGACTA_L001_17592_1 lane1_3600STDY6184154_GGAGTTGA_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6184155_AGCTCATC_L001_17592_1 lane1_3600STDY6184156_TAATCAAC_L001_17592_1 
#>                                      "0311"                                      "0221" 
#> lane1_3600STDY6184157_ACTGGTCG_L001_17592_1 lane1_3600STDY6184158_GACGATTG_L001_17592_1 
#>                                      "0313"                                      "0231" 
#> lane1_3600STDY6184159_AGCGATGA_L001_17592_1 lane1_3600STDY6184160_GAAGAGAT_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6184161_CGTATGCA_L001_17592_1 lane1_3600STDY6184162_CACGTGCG_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184163_GCTTAAAC_L001_17592_1 lane1_3600STDY6184164_GTTCCGCA_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6184165_GTATCGTC_L001_17592_1 lane1_3600STDY6184166_GTCCTCAC_L001_17592_1 
#>                                       "033"                                      "0311" 
#> lane1_3600STDY6184167_GTACGGAC_L001_17592_1 lane1_3600STDY6184168_CATTTTGC_L001_17592_1 
#>                                      "0231"                                      "0311" 
#> lane1_3600STDY6184169_TCCTCTCT_L001_17592_1 lane1_3600STDY6184170_AGCAACGA_L001_17592_1 
#>                                      "0341"                                      "0231" 
#> lane1_3600STDY6184171_ACAGAAGA_L001_17592_1 lane1_3600STDY6184172_CGACCCTT_L001_17592_1 
#>                                      "0311"                                       "033" 
#> lane1_3600STDY6184173_CTGCCTAG_L001_17592_1 lane1_3600STDY6184174_GAGCGCAT_L001_17592_1 
#>                                      "0311"                                       "033" 
#> lane1_3600STDY6184175_AACTTATC_L001_17592_1 lane1_3600STDY6184176_CCGATGTA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184177_TTACTACC_L001_17592_1 lane1_3600STDY6184178_CAAGGAGC_L001_17592_1 
#>                                      "0313"                                      "0311" 
#> lane1_3600STDY6184179_TGGTTGAC_L001_17592_1 lane1_3600STDY6184180_ACCTGCTG_L001_17592_1 
#>                                      "0313"                                      "0221"

show/hide code output

get_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 1085))
#> lane1_3600STDY6077864_ATCACGTT_L001_15986_1 lane1_3600STDY6077865_CGATGTTT_L001_15986_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6077866_TTAGGCAT_L001_15986_1 lane1_3600STDY6077867_TGACCACT_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077868_ACAGTGGT_L001_15986_1 lane1_3600STDY6077869_GCCAATGT_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077870_CAGATCTG_L001_15986_1 lane1_3600STDY6077871_ACTTGATG_L001_15986_1 
#>                                     "01212"                                     "01211" 
#> lane1_3600STDY6077872_GATCAGCG_L001_15986_1 lane1_3600STDY6077873_TAGCTTGT_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077874_GGCTACAG_L001_15986_1 lane1_3600STDY6077875_CTTGTACT_L001_15986_1 
#>                                     "01211"                                     "01212" 
#> lane1_3600STDY6077876_TGGTTGTT_L001_15986_1 lane1_3600STDY6077877_TCTCGGTT_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077878_TAAGCGTT_L001_15986_1 lane1_3600STDY6077879_TCCGTCTT_L001_15986_1 
#>                                     "01211"                                     "01212" 
#> lane1_3600STDY6077880_TGTACCTT_L001_15986_1 lane1_3600STDY6077881_TTCTGTGT_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077882_TCTGCTGT_L001_15986_1 lane1_3600STDY6077883_TTGGAGGT_L001_15986_1 
#>                                     "01211"                                      "0221" 
#> lane1_3600STDY6077884_TCGAGCGT_L001_15986_1 lane1_3600STDY6077885_TGATACGT_L001_15986_1 
#>                                     "01212"                                     "01212" 
#> lane1_3600STDY6077886_TGCATAGT_L001_15986_1 lane1_3600STDY6077887_TTGACTCT_L001_15986_1 
#>                                     "01212"                                     "01212" 
#> lane1_3600STDY6077888_TGCGATCT_L001_15986_1 lane1_3600STDY6077889_TTCCTGCT_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077890_TAGTGACT_L001_15986_1 lane1_3600STDY6077891_TACAGGAT_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077892_TCCTCAAT_L001_15986_1 lane1_3600STDY6077893_TGTGGTTG_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077894_TAGTCTTG_L001_15986_1 lane1_3600STDY6077895_TTCCATTG_L001_15986_1 
#>                                     "01211"                                     "01212" 
#> lane1_3600STDY6077896_TCGAAGTG_L001_15986_1 lane1_3600STDY6077897_TAACGCTG_L001_15986_1 
#>                                     "01212"                                     "01212" 
#> lane1_3600STDY6077898_TTGGTATG_L001_15986_1 lane1_3600STDY6077899_TGAACTGG_L001_15986_1 
#>                                     "01211"                                      "0221" 
#> lane1_3600STDY6077900_TACTTCGG_L001_15986_1 lane1_3600STDY6077901_TCTCACGG_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077902_TCAGGAGG_L001_15986_1 lane1_3600STDY6077903_TAAGTTCG_L001_15986_1 
#>                                     "01212"                                     "01211" 
#> lane1_3600STDY6077904_TCCAGTCG_L001_15986_1 lane1_3600STDY6077905_TGTATGCG_L001_15986_1 
#>                                      "0221"                                     "01211" 
#> lane1_3600STDY6077906_TCATTGAG_L001_15986_1 lane1_3600STDY6077907_TGGCTCAG_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077908_TATGCCAG_L001_15986_1 lane1_3600STDY6077909_TCAGATTC_L001_15986_1 
#>                                     "01212"                                     "01212" 
#> lane1_3600STDY6077910_TACTAGTC_L001_15986_1 lane1_3600STDY6077911_TTCAGCTC_L001_15986_1 
#>                                     "01211"                                      "0221" 
#> lane1_3600STDY6077912_TGTCTATC_L001_15986_1 lane1_3600STDY6077913_TATGTGGC_L001_15986_1 
#>                                     "01212"                                     "01211" 
#> lane1_3600STDY6077914_TTACTCGC_L001_15986_1 lane1_3600STDY6077915_TCGTTAGC_L001_15986_1 
#>                                      "0221"                                     "01212" 
#> lane1_3600STDY6077916_TACCGAGC_L001_15986_1 lane1_3600STDY6077917_TGTTCTCC_L001_15986_1 
#>                                     "01212"                                     "01212" 
#> lane1_3600STDY6077918_TTCGCACC_L001_15986_1 lane1_3600STDY6077919_TTGCGTAC_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077920_TCTACGAC_L001_15986_1 lane1_3600STDY6077921_TGACAGAC_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077922_TAGAACAC_L001_15986_1 lane1_3600STDY6077923_TCATCCTA_L001_15986_1 
#>                                     "01211"                                     "01212" 
#> lane1_3600STDY6077924_TGCTGATA_L001_15986_1 lane1_3600STDY6077925_TAGACGGA_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077926_TGTGAAGA_L001_15986_1 lane1_3600STDY6077927_TCTCTTCA_L001_15986_1 
#>                                     "01211"                                     "01212" 
#> lane1_3600STDY6077928_TTGTTCCA_L001_15986_1 lane1_3600STDY6077929_TGAAGCCA_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077930_TACCACCA_L001_15986_1 lane1_3600STDY6077931_TGCGTGAA_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077932_GGTGAGTT_L001_15986_1 lane1_3600STDY6077933_GATCTCTT_L001_15986_1 
#>                                     "01211"                                      "0221" 
#> lane1_3600STDY6077934_GTGTCCTT_L001_15986_1 lane1_3600STDY6077935_GACGGATT_L001_15986_1 
#>                                      "0221"                                     "01211" 
#> lane1_3600STDY6077936_GCAACATT_L001_15986_1 lane1_3600STDY6077937_GGTCGTGT_L001_15986_1 
#>                                     "01212"                                     "01212" 
#> lane1_3600STDY6077938_GAATCTGT_L001_15986_1 lane1_3600STDY6077939_GTACATCT_L001_15986_1 
#>                                     "01212"                                     "01211" 
#> lane1_3600STDY6077940_GAGGTGCT_L001_15986_1 lane1_3600STDY6077941_GCATGGCT_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077942_GTTAGCCT_L001_15986_1 lane1_3600STDY6077943_GTCGCTAT_L001_15986_1 
#>                                     "01211"                                     "01212" 
#> lane1_3600STDY6077944_GGAATGAT_L001_15986_1 lane1_3600STDY6077945_GAGCCAAT_L001_15986_1 
#>                                     "01211"                                     "01212" 
#> lane1_3600STDY6077946_GCTCCTTG_L001_15986_1 lane1_3600STDY6077947_GTAAGGTG_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077948_GAGGATGG_L001_15986_1 lane1_3600STDY6077949_GTTGTCGG_L001_15986_1 
#>                                     "01212"                                     "01211" 
#> lane1_3600STDY6077950_GGATTAGG_L001_15986_1 lane1_3600STDY6077951_GATAGAGG_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077952_GTGTGTCG_L001_15986_1 lane1_3600STDY6077953_GCAATCCG_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077954_GACCTTAG_L001_15986_1 lane1_3600STDY6077955_GCCTGTTC_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077956_GCACTGTC_L001_15986_1 lane1_3600STDY6077957_GCTAACTC_L001_15986_1 
#>                                     "01211"                                     "01212" 
#> lane1_3600STDY6077958_GATTCATC_L001_15986_1 lane1_3600STDY6077959_GTCTTGGC_L001_15986_1 
#>                                     "01212"                                     "01212" 
#> lane3_3600STDY6077960_ATCACGTT_L003_15987_1 lane3_3600STDY6077961_CGATGTTT_L003_15987_1 
#>                                      "0221"                                      "0221" 
#> lane3_3600STDY6077962_TTAGGCAT_L003_15987_1 lane3_3600STDY6077963_TGACCACT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077964_ACAGTGGT_L003_15987_1 lane3_3600STDY6077965_GCCAATGT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077966_CAGATCTG_L003_15987_1 lane3_3600STDY6077967_ACTTGATG_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077968_GATCAGCG_L003_15987_1 lane3_3600STDY6077969_TAGCTTGT_L003_15987_1 
#>                                      "0122"                                     "01233" 
#> lane3_3600STDY6077970_GGCTACAG_L003_15987_1 lane3_3600STDY6077971_CTTGTACT_L003_15987_1 
#>                                     "01232"                                     "01232" 
#> lane3_3600STDY6077972_TGGTTGTT_L003_15987_1 lane3_3600STDY6077973_TCTCGGTT_L003_15987_1 
#>                                     "01233"                                      "0122" 
#> lane3_3600STDY6077974_TAAGCGTT_L003_15987_1 lane3_3600STDY6077975_TCCGTCTT_L003_15987_1 
#>                                     "01231"                                     "01231" 
#> lane3_3600STDY6077976_TGTACCTT_L003_15987_1 lane3_3600STDY6077977_TTCTGTGT_L003_15987_1 
#>                                     "01232"                                      "0122" 
#> lane3_3600STDY6077978_TCTGCTGT_L003_15987_1 lane3_3600STDY6077979_TTGGAGGT_L003_15987_1 
#>                                      "0224"                                      "0122" 
#> lane3_3600STDY6077980_TCGAGCGT_L003_15987_1 lane3_3600STDY6077981_TGATACGT_L003_15987_1 
#>                                      "0122"                                     "01233" 
#> lane3_3600STDY6077982_TGCATAGT_L003_15987_1 lane3_3600STDY6077983_TTGACTCT_L003_15987_1 
#>                                      "0122"                                     "01233" 
#> lane3_3600STDY6077984_TGCGATCT_L003_15987_1 lane3_3600STDY6077985_TTCCTGCT_L003_15987_1 
#>                                     "01233"                                      "0122" 
#> lane3_3600STDY6077986_TAGTGACT_L003_15987_1 lane3_3600STDY6077987_TACAGGAT_L003_15987_1 
#>                                     "01233"                                     "01231" 
#> lane3_3600STDY6077988_TCCTCAAT_L003_15987_1 lane3_3600STDY6077989_TGTGGTTG_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077990_TAGTCTTG_L003_15987_1 lane3_3600STDY6077991_TTCCATTG_L003_15987_1 
#>                                      "0122"                                     "01233" 
#> lane3_3600STDY6077992_TCGAAGTG_L003_15987_1 lane3_3600STDY6077993_TAACGCTG_L003_15987_1 
#>                                      "0122"                                     "01231" 
#> lane3_3600STDY6077994_TTGGTATG_L003_15987_1 lane3_3600STDY6077995_TGAACTGG_L003_15987_1 
#>                                     "01231"                                     "01231" 
#> lane3_3600STDY6077996_TACTTCGG_L003_15987_1 lane3_3600STDY6077997_TCTCACGG_L003_15987_1 
#>                                      "0122"                                      "0224" 
#> lane3_3600STDY6077998_TCAGGAGG_L003_15987_1 lane3_3600STDY6077999_TAAGTTCG_L003_15987_1 
#>                                     "01231"                                     "01231" 
#> lane3_3600STDY6078000_TCCAGTCG_L003_15987_1 lane3_3600STDY6078001_TGTATGCG_L003_15987_1 
#>                                      "0122"                                      "0221" 
#> lane3_3600STDY6078002_TCATTGAG_L003_15987_1 lane3_3600STDY6078003_TGGCTCAG_L003_15987_1 
#>                                      "0342"                                      "0122" 
#> lane3_3600STDY6078004_TATGCCAG_L003_15987_1 lane3_3600STDY6078005_TCAGATTC_L003_15987_1 
#>                                      "0122"                                     "01231" 
#> lane3_3600STDY6078006_TACTAGTC_L003_15987_1 lane3_3600STDY6078007_TTCAGCTC_L003_15987_1 
#>                                     "01231"                                      "0122" 
#> lane3_3600STDY6078008_TGTCTATC_L003_15987_1 lane3_3600STDY6078009_TATGTGGC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078010_TTACTCGC_L003_15987_1 lane3_3600STDY6078011_TCGTTAGC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078012_TACCGAGC_L003_15987_1 lane3_3600STDY6078013_TGTTCTCC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078014_TTCGCACC_L003_15987_1 lane3_3600STDY6078015_TTGCGTAC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078016_TCTACGAC_L003_15987_1 lane3_3600STDY6078017_TGACAGAC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078018_TAGAACAC_L003_15987_1 lane3_3600STDY6078019_TCATCCTA_L003_15987_1 
#>                                     "01233"                                     "01233" 
#> lane3_3600STDY6078020_TGCTGATA_L003_15987_1 lane3_3600STDY6078021_TAGACGGA_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078022_TGTGAAGA_L003_15987_1 lane3_3600STDY6078023_TCTCTTCA_L003_15987_1 
#>                                     "01231"                                     "01233" 
#> lane3_3600STDY6078024_TTGTTCCA_L003_15987_1 lane3_3600STDY6078025_TGAAGCCA_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078026_TACCACCA_L003_15987_1 lane3_3600STDY6078027_TGCGTGAA_L003_15987_1 
#>                                     "01233"                                      "0221" 
#> lane3_3600STDY6078028_GGTGAGTT_L003_15987_1 lane3_3600STDY6078029_GATCTCTT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078030_GTGTCCTT_L003_15987_1 lane3_3600STDY6078031_GACGGATT_L003_15987_1 
#>                                     "01231"                                     "01232" 
#> lane3_3600STDY6078032_GCAACATT_L003_15987_1 lane3_3600STDY6078033_GGTCGTGT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078034_GAATCTGT_L003_15987_1 lane3_3600STDY6078035_GTACATCT_L003_15987_1 
#>                                      "0122"                                     "01233" 
#> lane3_3600STDY6078036_GAGGTGCT_L003_15987_1 lane3_3600STDY6078037_GCATGGCT_L003_15987_1 
#>                                     "01231"                                      "0122" 
#> lane3_3600STDY6078038_GTTAGCCT_L003_15987_1 lane3_3600STDY6078039_GTCGCTAT_L003_15987_1 
#>                                     "01233"                                     "01233" 
#> lane3_3600STDY6078040_GGAATGAT_L003_15987_1 lane3_3600STDY6078041_GAGCCAAT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078042_GCTCCTTG_L003_15987_1 lane3_3600STDY6078043_GTAAGGTG_L003_15987_1 
#>                                     "01231"                                     "01232" 
#> lane3_3600STDY6078044_GAGGATGG_L003_15987_1 lane3_3600STDY6078045_GTTGTCGG_L003_15987_1 
#>                                     "01232"                                     "01232" 
#> lane3_3600STDY6078046_GGATTAGG_L003_15987_1 lane3_3600STDY6078047_GATAGAGG_L003_15987_1 
#>                                     "01232"                                     "01232" 
#> lane3_3600STDY6078048_GTGTGTCG_L003_15987_1 lane3_3600STDY6078049_GCAATCCG_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078050_GACCTTAG_L003_15987_1 lane3_3600STDY6078051_GCCTGTTC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078052_GCACTGTC_L003_15987_1 lane3_3600STDY6078053_GCTAACTC_L003_15987_1 
#>                                      "0122"                                     "01232" 
#> lane3_3600STDY6078054_GATTCATC_L003_15987_1 lane3_3600STDY6078055_GTCTTGGC_L003_15987_1 
#>                                     "01232"                                     "01232" 
#> lane1_3600STDY6167693_ATCACGTT_L001_17236_1 lane1_3600STDY6167694_CGATGTTT_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167695_TTAGGCAT_L001_17236_1 lane1_3600STDY6167696_TGACCACT_L001_17236_1 
#>                                      "0342"                                      "0112" 
#> lane1_3600STDY6167697_ACAGTGGT_L001_17236_1 lane1_3600STDY6167698_GCCAATGT_L001_17236_1 
#>                                      "0224"                                      "0113" 
#> lane1_3600STDY6167699_CAGATCTG_L001_17236_1 lane1_3600STDY6167700_ACTTGATG_L001_17236_1 
#>                                      "0113"                                      "0221" 
#> lane1_3600STDY6167701_GATCAGCG_L001_17236_1 lane1_3600STDY6167702_TAGCTTGT_L001_17236_1 
#>                                      "0113"                                       "014" 
#> lane1_3600STDY6167703_GGCTACAG_L001_17236_1 lane1_3600STDY6167704_CTTGTACT_L001_17236_1 
#>                                       "014"                                      "0342" 
#> lane1_3600STDY6167705_TGGTTGTT_L001_17236_1 lane1_3600STDY6167706_TCTCGGTT_L001_17236_1 
#>                                       "014"                                      "0221" 
#> lane1_3600STDY6167707_TAAGCGTT_L001_17236_1 lane1_3600STDY6167708_TCCGTCTT_L001_17236_1 
#>                                      "0221"                                       "013" 
#> lane1_3600STDY6167709_TGTACCTT_L001_17236_1 lane1_3600STDY6167710_TTCTGTGT_L001_17236_1 
#>                                      "0113"                                      "0221" 
#> lane1_3600STDY6167711_TCTGCTGT_L001_17236_1 lane1_3600STDY6167712_TTGGAGGT_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167713_TCGAGCGT_L001_17236_1 lane1_3600STDY6167714_TGATACGT_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167715_TGCATAGT_L001_17236_1 lane1_3600STDY6167716_TTGACTCT_L001_17236_1 
#>                                      "0113"                                       "013" 
#> lane1_3600STDY6167717_TGCGATCT_L001_17236_1 lane1_3600STDY6167718_TTCCTGCT_L001_17236_1 
#>                                       "013"                                      "0221" 
#> lane1_3600STDY6167719_TAGTGACT_L001_17236_1 lane1_3600STDY6167720_TACAGGAT_L001_17236_1 
#>                                      "0342"                                      "0342" 
#> lane1_3600STDY6167721_TCCTCAAT_L001_17236_1 lane1_3600STDY6167722_TGTGGTTG_L001_17236_1 
#>                                      "0342"                                      "0113" 
#> lane1_3600STDY6167723_TAGTCTTG_L001_17236_1 lane1_3600STDY6167724_TTCCATTG_L001_17236_1 
#>                                      "0113"                                      "0221" 
#> lane1_3600STDY6167725_TCGAAGTG_L001_17236_1 lane1_3600STDY6167726_TAACGCTG_L001_17236_1 
#>                                      "0113"                                       "014" 
#> lane1_3600STDY6167727_TTGGTATG_L001_17236_1 lane1_3600STDY6167728_TGAACTGG_L001_17236_1 
#>                                       "013"                                     "01212" 
#> lane1_3600STDY6167729_TACTTCGG_L001_17236_1 lane1_3600STDY6167730_TCTCACGG_L001_17236_1 
#>                                      "0111"                                       "014" 
#> lane1_3600STDY6167731_TCAGGAGG_L001_17236_1 lane1_3600STDY6167732_TAAGTTCG_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6167733_TCCAGTCG_L001_17236_1 lane1_3600STDY6167734_TGTATGCG_L001_17236_1 
#>                                      "0113"                                      "0221" 
#> lane1_3600STDY6167735_TCATTGAG_L001_17236_1 lane1_3600STDY6167736_TGGCTCAG_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167737_TATGCCAG_L001_17236_1 lane1_3600STDY6167738_TCAGATTC_L001_17236_1 
#>                                      "0113"                                       "013" 
#> lane1_3600STDY6167739_TACTAGTC_L001_17236_1 lane1_3600STDY6167740_TTCAGCTC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167741_TGTCTATC_L001_17236_1 lane1_3600STDY6167742_TATGTGGC_L001_17236_1 
#>                                      "0113"                                       "013" 
#> lane1_3600STDY6167743_TTACTCGC_L001_17236_1 lane1_3600STDY6167744_TCGTTAGC_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167745_TACCGAGC_L001_17236_1 lane1_3600STDY6167746_TGTTCTCC_L001_17236_1 
#>                                      "0342"                                      "0111" 
#> lane1_3600STDY6167747_TTCGCACC_L001_17236_1 lane1_3600STDY6167748_TTGCGTAC_L001_17236_1 
#>                                      "0342"                                      "0111" 
#> lane1_3600STDY6167749_TCTACGAC_L001_17236_1 lane1_3600STDY6167750_TGACAGAC_L001_17236_1 
#>                                      "0111"                                      "0113" 
#> lane1_3600STDY6167751_TAGAACAC_L001_17236_1 lane1_3600STDY6167752_TCATCCTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167753_TGCTGATA_L001_17236_1 lane1_3600STDY6167754_TAGACGGA_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167755_TGTGAAGA_L001_17236_1 lane1_3600STDY6167756_TCTCTTCA_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6167757_TTGTTCCA_L001_17236_1 lane1_3600STDY6167758_TGAAGCCA_L001_17236_1 
#>                                      "0111"                                      "0221" 
#> lane1_3600STDY6167759_TACCACCA_L001_17236_1 lane1_3600STDY6167760_TGCGTGAA_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6167761_GGTGAGTT_L001_17236_1 lane1_3600STDY6167762_GATCTCTT_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167763_GTGTCCTT_L001_17236_1 lane1_3600STDY6167764_GACGGATT_L001_17236_1 
#>                                      "0112"                                       "013" 
#> lane1_3600STDY6167765_GCAACATT_L001_17236_1 lane1_3600STDY6167766_GGTCGTGT_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6167767_GAATCTGT_L001_17236_1 lane1_3600STDY6167768_GTACATCT_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167769_GAGGTGCT_L001_17236_1 lane1_3600STDY6167770_GCATGGCT_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167771_GTTAGCCT_L001_17236_1 lane1_3600STDY6167772_GTCGCTAT_L001_17236_1 
#>                                      "0112"                                      "0111" 
#> lane1_3600STDY6167773_GGAATGAT_L001_17236_1 lane1_3600STDY6167774_GAGCCAAT_L001_17236_1 
#>                                      "0112"                                      "0113" 
#> lane1_3600STDY6167775_GCTCCTTG_L001_17236_1 lane1_3600STDY6167776_GTAAGGTG_L001_17236_1 
#>                                      "0111"                                      "0221" 
#> lane1_3600STDY6167777_GAGGATGG_L001_17236_1 lane1_3600STDY6167778_GTTGTCGG_L001_17236_1 
#>                                      "0112"                                      "0221" 
#> lane1_3600STDY6167779_GGATTAGG_L001_17236_1 lane1_3600STDY6167780_GATAGAGG_L001_17236_1 
#>                                      "0113"                                      "0112" 
#> lane1_3600STDY6167781_GTGTGTCG_L001_17236_1 lane1_3600STDY6167782_GCAATCCG_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167783_GACCTTAG_L001_17236_1 lane1_3600STDY6167784_GCCTGTTC_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167785_GCACTGTC_L001_17236_1 lane1_3600STDY6167786_GCTAACTC_L001_17236_1 
#>                                      "0112"                                      "0111" 
#> lane1_3600STDY6167787_GATTCATC_L001_17236_1 lane1_3600STDY6167788_GTCTTGGC_L001_17236_1 
#>                                      "0112"                                      "0221" 
#> lane1_3600STDY6167789_GTAGAAGC_L001_17236_1 lane1_3600STDY6167790_GATGGTCC_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6167791_GTGCTACC_L001_17236_1 lane1_3600STDY6167792_GCGATTAC_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167793_GGTTGGAC_L001_17236_1 lane1_3600STDY6167794_GGCACAAC_L001_17236_1 
#>                                      "0112"                                      "0111" 
#> lane1_3600STDY6167795_GACACTTA_L001_17236_1 lane1_3600STDY6167796_GTGCAGTA_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167797_GGAGTCTA_L001_17236_1 lane1_3600STDY6167798_GCTATGGA_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6167799_GAGTGCGA_L001_17236_1 lane1_3600STDY6167800_GTAACCGA_L001_17236_1 
#>                                      "0342"                                      "0111" 
#> lane1_3600STDY6167801_GGCAAGCA_L001_17236_1 lane1_3600STDY6167802_GCCTTACA_L001_17236_1 
#>                                      "0112"                                       "013" 
#> lane1_3600STDY6167803_GAACGACA_L001_17236_1 lane1_3600STDY6167804_GCAGGTAA_L001_17236_1 
#>                                       "013"                                      "0111" 
#> lane1_3600STDY6167805_GCGTCGAA_L001_17236_1 lane1_3600STDY6167806_CGTTCGGT_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6167807_CACCAGGT_L001_17236_1 lane1_3600STDY6167808_CTGCGAGT_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6167809_CCGTATCT_L001_17236_1 lane1_3600STDY6167810_CGCTTCCT_L001_17236_1 
#>                                      "0111"                                      "0222" 
#> lane1_3600STDY6167811_CAAGACCT_L001_17236_1 lane1_3600STDY6167812_CACACACT_L001_17236_1 
#>                                      "0111"                                       "014" 
#> lane1_3600STDY6167813_CCTAGTAT_L001_17236_1 lane1_3600STDY6167814_CCACCGAT_L001_17236_1 
#>                                      "0221"                                      "0112" 
#> lane1_3600STDY6167815_CTTCACAT_L001_17236_1 lane1_3600STDY6167816_CTATCATG_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167817_CATGAATG_L001_17236_1 lane1_3600STDY6167818_CCACTTGG_L001_17236_1 
#>                                      "0342"                                      "0111" 
#> lane1_3600STDY6167819_CTGTACGG_L001_17236_1 lane1_3600STDY6167820_CTAGATAG_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167821_CACTCGAG_L001_17236_1 lane1_3600STDY6167822_CCGACAAG_L001_17236_1 
#>                                      "0342"                                       "013" 
#> lane1_3600STDY6167823_CTTGCTTC_L001_17236_1 lane1_3600STDY6167824_CATAGGTC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167825_CACATTGC_L001_17236_1 lane1_3600STDY6167826_CGCTAAGC_L001_17236_1 
#>                                      "0111"                                       "014" 
#> lane1_3600STDY6167827_CAACCTCC_L001_17236_1 lane1_3600STDY6167828_CAGCTGAC_L001_17236_1 
#>                                       "013"                                      "0111" 
#> lane1_3600STDY6167829_CTCAAGAC_L001_17236_1 lane1_3600STDY6167830_CGTGTCAC_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167831_CCATGCAC_L001_17236_1 lane1_3600STDY6167832_CGTTACTA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167833_CAAGTAGA_L001_17236_1 lane1_3600STDY6167834_CTCTCTCA_L001_17236_1 
#>                                      "0111"                                      "0113" 
#> lane1_3600STDY6167835_CGACTGCA_L001_17236_1 lane1_3600STDY6167836_CCTGAGCA_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6167837_CAGGCTAA_L001_17236_1 lane1_3600STDY6167838_CGGAGGAA_L001_17236_1 
#>                                       "014"                                      "0113" 
#> lane1_3600STDY6167839_AGGAGATT_L001_17236_1 lane1_3600STDY6167840_AGGCAGCT_L001_17236_1 
#>                                       "013"                                      "0111" 
#> lane1_3600STDY6167841_ACGTTCAT_L001_17236_1 lane1_3600STDY6167842_AACGTGTG_L001_17236_1 
#>                                      "0342"                                       "013" 
#> lane1_3600STDY6167843_AGACCGTG_L001_17236_1 lane1_3600STDY6167844_ACCTCTGG_L001_17236_1 
#>                                      "0342"                                      "0221" 
#> lane1_3600STDY6167845_ATCCTAGG_L001_17236_1 lane1_3600STDY6167846_ATCAACCG_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167847_AGGTCACG_L001_17236_1 lane1_3600STDY6167848_ACTGTTAG_L001_17236_1 
#>                                      "0221"                                       "013" 
#> lane1_3600STDY6167849_AAGAGTAG_L001_17236_1 lane1_3600STDY6167850_ATTCGGAG_L001_17236_1 
#>                                       "013"                                       "014" 
#> lane1_3600STDY6167851_ACGCAATC_L001_17236_1 lane1_3600STDY6167852_ACAAGTGC_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167853_ATGGATCC_L001_17236_1 lane1_3600STDY6167854_AGAGGACC_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167855_ATCTCCAC_L001_17236_1 lane1_3600STDY6167856_ATTGGCTA_L001_17236_1 
#>                                      "0111"                                      "0113" 
#> lane1_3600STDY6167857_AATCCTGA_L001_17236_1 lane1_3600STDY6167858_AGGATTCA_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6167859_AACTGGCA_L001_17236_1 lane1_3600STDY6167860_ACAACGCA_L001_17236_1 
#>                                       "013"                                      "0112" 
#> lane1_3600STDY6167861_CGGAAACA_L001_17236_1 lane1_3600STDY6167862_AATGAATT_L001_17236_1 
#>                                      "0221"                                       "014" 
#> lane1_3600STDY6167863_TAGGACCC_L001_17236_1 lane1_3600STDY6167864_TCTCAGTG_L001_17236_1 
#>                                      "0113"                                      "0111" 
#> lane1_3600STDY6167865_CATGGGAA_L001_17236_1 lane1_3600STDY6167866_CCTAAGAT_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167867_CTCAGATA_L001_17236_1 lane1_3600STDY6167868_CCCATAGG_L001_17236_1 
#>                                      "0111"                                       "014" 
#> lane1_3600STDY6167869_GCTATGAC_L001_17236_1 lane1_3600STDY6167870_GCTGTGAA_L001_17236_1 
#>                                      "0111"                                      "0221" 
#> lane1_3600STDY6167871_ACCTTCAA_L001_17236_1 lane1_3600STDY6167872_ACAAAGCC_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6167873_CAAAACCG_L001_17236_1 lane1_3600STDY6167874_GCTGGACA_L001_17236_1 
#>                                      "0221"                                       "014" 
#> lane1_3600STDY6167875_AAGTCGTA_L001_17236_1 lane1_3600STDY6167876_CATCCGTA_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6167877_TTGTGTCT_L001_17236_1 lane1_3600STDY6167878_TGCTCTAG_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6167879_ACCCAACA_L001_17236_1 lane1_3600STDY6167880_CGATCTGA_L001_17236_1 
#>                                      "0221"                                      "0112" 
#> lane1_3600STDY6167881_GTTCCACG_L001_17236_1 lane1_3600STDY6167882_ACTCTTTC_L001_17236_1 
#>                                      "0111"                                       "013" 
#> lane1_3600STDY6167883_TATTGGAG_L001_17236_1 lane1_3600STDY6167884_TAAACATA_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6167885_GTAAGATA_L001_17236_1 lane1_3600STDY6167886_TACCGCAA_L001_17236_1 
#>                                      "0342"                                       "013" 
#> lane1_3600STDY6167887_TATCTCCT_L001_17236_1 lane1_3600STDY6167888_TGTCATCT_L001_17236_1 
#>                                      "0342"                                      "0111" 
#> lane1_3600STDY6167889_ATAGCTCT_L001_17236_1 lane1_3600STDY6167890_AGTCCAAC_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167891_TTTGGGCA_L001_17236_1 lane1_3600STDY6167892_TCTGACGC_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167893_TGTCGACT_L001_17236_1 lane1_3600STDY6167894_GTCACGTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167895_TTGAGCGA_L001_17236_1 lane1_3600STDY6167896_GAGACATA_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167897_GTCAAGCT_L001_17236_1 lane1_3600STDY6167898_AGCAAGTT_L001_17236_1 
#>                                      "0232"                                      "0342" 
#> lane1_3600STDY6167899_GACGCTCA_L001_17236_1 lane1_3600STDY6167900_ACGGCAGC_L001_17236_1 
#>                                      "0112"                                      "0342" 
#> lane1_3600STDY6167901_AGAACTGA_L001_17236_1 lane1_3600STDY6167902_CGCCTTTG_L001_17236_1 
#>                                      "0342"                                      "0112" 
#> lane1_3600STDY6167903_TAAGGTCA_L001_17236_1 lane1_3600STDY6167904_ACGTTGGC_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167905_CCAGCTTA_L001_17236_1 lane1_3600STDY6167906_GAATCCTA_L001_17236_1 
#>                                      "0113"                                      "0111" 
#> lane1_3600STDY6167907_ACTTCGTA_L001_17236_1 lane1_3600STDY6167908_TAGTCGGT_L001_17236_1 
#>                                       "013"                                      "0221" 
#> lane1_3600STDY6167909_CGCACGAG_L001_17236_1 lane1_3600STDY6167910_ACGTACTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167911_AGCGCCAA_L001_17236_1 lane1_3600STDY6167912_GCCTGCCC_L001_17236_1 
#>                                      "0113"                                      "0113" 
#> lane1_3600STDY6167913_AGGACGAT_L001_17236_1 lane1_3600STDY6167914_CTTGACCG_L001_17236_1 
#>                                      "0111"                                      "0113" 
#> lane1_3600STDY6167915_AGGTCTAA_L001_17236_1 lane1_3600STDY6167916_CGAGATCC_L001_17236_1 
#>                                       "013"                                      "0111" 
#> lane1_3600STDY6167917_ATTAGCGG_L001_17236_1 lane1_3600STDY6167918_GCGCTGAT_L001_17236_1 
#>                                      "0111"                                      "0221" 
#> lane1_3600STDY6167919_TGCTGAAC_L001_17236_1 lane1_3600STDY6167920_GAGGGCAG_L001_17236_1 
#>                                       "014"                                      "0221" 
#> lane1_3600STDY6167921_GTTTTCAC_L001_17236_1 lane1_3600STDY6167922_GAGATGCC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167923_TTGAGAAG_L001_17236_1 lane1_3600STDY6167924_GCATCCGG_L001_17236_1 
#>                                       "013"                                      "0112" 
#> lane1_3600STDY6167925_GTCACCAG_L001_17236_1 lane1_3600STDY6167926_GAGGTCGC_L001_17236_1 
#>                                      "0112"                                      "0342" 
#> lane1_3600STDY6167927_AAGGGGTA_L001_17236_1 lane1_3600STDY6167928_TTTTACGT_L001_17236_1 
#>                                      "0113"                                      "0112" 
#> lane1_3600STDY6167929_TTCCTACA_L001_17236_1 lane1_3600STDY6167930_AGTGTAGT_L001_17236_1 
#>                                      "0111"                                       "013" 
#> lane1_3600STDY6167931_GTGGCCAA_L001_17236_1 lane1_3600STDY6167932_AAATACTC_L001_17236_1 
#>                                       "013"                                       "014" 
#> lane1_3600STDY6167933_CACCCGTC_L001_17236_1 lane1_3600STDY6167934_TCGTGGTT_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6167935_ACTTGGGG_L001_17236_1 lane1_3600STDY6167936_GGCTGCTT_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6167937_CAGGGTCG_L001_17236_1 lane1_3600STDY6167938_CTCGTCGA_L001_17236_1 
#>                                      "0112"                                      "0111" 
#> lane1_3600STDY6167939_TCTACAGT_L001_17236_1 lane1_3600STDY6167940_CTTCTAGA_L001_17236_1 
#>                                      "0112"                                      "0342" 
#> lane1_3600STDY6167941_AACGGCTT_L001_17236_1 lane1_3600STDY6167942_ATAAGACT_L001_17236_1 
#>                                      "0111"                                       "013" 
#> lane1_3600STDY6167943_GTTTTTCG_L001_17236_1 lane1_3600STDY6167944_ATTGGTAT_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167945_CGCCAGTA_L001_17236_1 lane1_3600STDY6167946_AAGCCGAA_L001_17236_1 
#>                                      "0113"                                      "0113" 
#> lane1_3600STDY6167947_TGACCCAC_L001_17236_1 lane1_3600STDY6167948_ATTGCACA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167949_CTTTTGAT_L001_17236_1 lane1_3600STDY6167950_TAGCGAGA_L001_17236_1 
#>                                      "0112"                                      "0221" 
#> lane1_3600STDY6167951_TTCGCAGG_L001_17236_1 lane1_3600STDY6167952_TAGTTATT_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167953_TCCTCCGA_L001_17236_1 lane1_3600STDY6167954_GCGGGTCT_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167955_GATTCTAT_L001_17236_1 lane1_3600STDY6167956_ATGCAAAG_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167957_GTCTGAGG_L001_17236_1 lane1_3600STDY6167958_TCTGGCGA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167959_AATTTGCG_L001_17236_1 lane1_3600STDY6167960_TGGGTTGG_L001_17236_1 
#>                                      "0111"                                      "0342" 
#> lane1_3600STDY6167961_AGTTGAAA_L001_17236_1 lane1_3600STDY6167962_GACCGGAA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167963_GATCGAAC_L001_17236_1 lane1_3600STDY6167964_GTATAGGG_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167965_GGTAAGAG_L001_17236_1 lane1_3600STDY6167966_AGTCCGAT_L001_17236_1 
#>                                      "0221"                                      "0112" 
#> lane1_3600STDY6167967_ATACAGGC_L001_17236_1 lane1_3600STDY6167968_TGAGACTC_L001_17236_1 
#>                                      "0111"                                      "0113" 
#> lane1_3600STDY6167969_ACTCAGGA_L001_17236_1 lane1_3600STDY6167970_GTGTCTGA_L001_17236_1 
#>                                      "0113"                                      "0342" 
#> lane1_3600STDY6167971_CTTGAATC_L001_17236_1 lane1_3600STDY6167972_CCGCATGA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167973_AAGTAACA_L001_17236_1 lane1_3600STDY6167974_GTGGTACT_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167975_AGCTGTGC_L001_17236_1 lane1_3600STDY6167976_TTACCTTC_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167977_TCCGGGTA_L001_17236_1 lane1_3600STDY6167978_CTACGTAA_L001_17236_1 
#>                                      "0112"                                      "0111" 
#> lane1_3600STDY6167979_TCGGACCG_L001_17236_1 lane1_3600STDY6167980_ATGCGTCG_L001_17236_1 
#>                                      "0111"                                       "013" 
#> lane1_3600STDY6167981_TTCTTAGC_L001_17236_1 lane1_3600STDY6167982_TGAGTAAG_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6167983_AAGTGATA_L001_17236_1 lane1_3600STDY6167984_TCGATGCG_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167985_TATTCTGG_L001_17236_1 lane1_3600STDY6167986_AGCCGTGA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167987_AAGCCTTC_L001_17236_1 lane1_3600STDY6167988_AGGTATCC_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167989_AGGATCTC_L001_17236_1 lane1_3600STDY6167990_CTGTTTGA_L001_17236_1 
#>                                      "0221"                                      "0111" 
#> lane1_3600STDY6167991_GGAATTTC_L001_17236_1 lane1_3600STDY6167992_TTGGAGCA_L001_17236_1 
#>                                       "013"                                      "0342" 
#> lane1_3600STDY6167993_AAGGTCTG_L001_17236_1 lane1_3600STDY6167994_AATTAGGC_L001_17236_1 
#>                                      "0342"                                      "0113" 
#> lane1_3600STDY6167995_AATCGGGT_L001_17236_1 lane1_3600STDY6167996_AGGTAGAC_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167997_CTTATTCC_L001_17236_1 lane1_3600STDY6167998_CAGGCTCT_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167999_AAAGCACG_L001_17236_1 lane1_3600STDY6168000_GTATACAC_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6168001_GGACATAT_L001_17236_1 lane1_3600STDY6168002_CGGTTGGG_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6168003_GTCCGTGA_L001_17236_1 lane1_3600STDY6168004_GCCGAACC_L001_17236_1 
#>                                      "0111"                                       "013" 
#> lane1_3600STDY6168005_ACTTTACT_L001_17236_1 lane1_3600STDY6168006_GGGTCCAT_L001_17236_1 
#>                                      "0342"                                       "013" 
#> lane1_3600STDY6168007_ATAACTAG_L001_17236_1 lane1_3600STDY6168008_AATAGAGA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6168009_TCACCATT_L001_17236_1 lane1_3600STDY6168010_CGCCTGAT_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6168011_GCGTGAAC_L001_17236_1 lane1_3600STDY6168012_TAAGGGTG_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6168013_GGTGTCGA_L001_17236_1 lane1_3600STDY6168014_CCGTTAGG_L001_17236_1 
#>                                      "0112"                                       "013" 
#> lane1_3600STDY6168015_TGGCAAAA_L001_17236_1 lane1_3600STDY6168016_CCTACCCG_L001_17236_1 
#>                                      "0111"                                      "0222" 
#> lane1_3600STDY6168017_AACAGCGC_L001_17236_1 lane1_3600STDY6168018_TATACATC_L001_17236_1 
#>                                       "013"                                      "0221" 
#> lane1_3600STDY6168019_AAGCGACT_L001_17236_1 lane1_3600STDY6168020_GAAGCGCA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6168021_ACCTCTAC_L001_17236_1 lane1_3600STDY6168022_GATTGCGT_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6168023_GCTGGTTG_L001_17236_1 lane1_3600STDY6168024_ATCGTCCT_L001_17236_1 
#>                                      "0221"                                      "0112" 
#> lane1_3600STDY6168025_GGACACGG_L001_17236_1 lane1_3600STDY6168026_CGCACCTA_L001_17236_1 
#>                                      "0112"                                      "0111" 
#> lane1_3600STDY6168027_CTTCGGCT_L001_17236_1 lane1_3600STDY6168028_CGAATCGA_L001_17236_1 
#>                                      "0111"                                       "014" 
#> lane1_3600STDY6168029_TAACAACT_L001_17236_1 lane1_3600STDY6168030_AGCTCTTT_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168031_TAATCCCT_L001_17236_1 lane1_3600STDY6168032_AGGACACT_L001_17236_1 
#>                                      "0113"                                      "0342" 
#> lane1_3600STDY6168033_TTACACTA_L001_17236_1 lane1_3600STDY6168034_AAACATCA_L001_17236_1 
#>                                      "0111"                                      "0113" 
#> lane1_3600STDY6168035_CCATAGCT_L001_17236_1 lane1_3600STDY6168036_GTTATGGC_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6168037_ATCCCCTA_L001_17236_1 lane1_3600STDY6168038_CATACTAC_L001_17236_1 
#>                                      "0111"                                       "014" 
#> lane1_3600STDY6168039_CAATTGTT_L001_17236_1 lane1_3600STDY6168040_AAACCCGT_L001_17236_1 
#>                                       "014"                                      "0221" 
#> lane1_3600STDY6168041_CAGATTTC_L001_17236_1 lane1_3600STDY6168042_GCGTAGGT_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6168043_GGCATTCG_L001_17236_1 lane1_3600STDY6168044_TGGGGCTT_L001_17236_1 
#>                                      "0113"                                      "0112" 
#> lane1_3600STDY6168045_CTGACTAC_L001_17236_1 lane1_3600STDY6168046_AACTTTTA_L001_17236_1 
#>                                      "0112"                                      "0342" 
#> lane1_3600STDY6168047_AGGGATTC_L001_17236_1 lane1_3600STDY6168048_CCGAGTAG_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6168049_GGGGACTA_L001_17236_1 lane1_3600STDY6168050_GGAGTTGA_L001_17236_1 
#>                                      "0113"                                      "0111" 
#> lane1_3600STDY6168051_AGCTCATC_L001_17236_1 lane1_3600STDY6168052_TAATCAAC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168053_ACTGGTCG_L001_17236_1 lane1_3600STDY6168054_GACGATTG_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168055_AGCGATGA_L001_17236_1 lane1_3600STDY6168056_GAAGAGAT_L001_17236_1 
#>                                      "0113"                                      "0342" 
#> lane1_3600STDY6168057_CGTATGCA_L001_17236_1 lane1_3600STDY6168058_CACGTGCG_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6168059_GCTTAAAC_L001_17236_1 lane1_3600STDY6168060_GTTCCGCA_L001_17236_1 
#>                                       "013"                                      "0111" 
#> lane1_3600STDY6168061_GTATCGTC_L001_17236_1 lane1_3600STDY6168062_GTCCTCAC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168063_GTACGGAC_L001_17236_1 lane1_3600STDY6168064_CATTTTGC_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6168065_TCCTCTCT_L001_17236_1 lane1_3600STDY6168066_AGCAACGA_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6168067_ACAGAAGA_L001_17236_1 lane1_3600STDY6168068_CGACCCTT_L001_17236_1 
#>                                       "013"                                      "0111" 
#> lane1_3600STDY6168069_CTGCCTAG_L001_17236_1 lane1_3600STDY6168070_GAGCGCAT_L001_17236_1 
#>                                      "0221"                                       "013" 
#> lane1_3600STDY6168071_AACTTATC_L001_17236_1 lane1_3600STDY6168072_CCGATGTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168073_TTACTACC_L001_17236_1 lane1_3600STDY6168074_CAAGGAGC_L001_17236_1 
#>                                       "013"                                       "014" 
#> lane1_3600STDY6168075_TGGTTGAC_L001_17236_1 lane1_3600STDY6168076_ACCTGCTG_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane4_3600STDY6184181_ATCACGTT_L004_17480_1 lane4_3600STDY6184182_CGATGTTT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184183_TTAGGCAT_L004_17480_1 lane4_3600STDY6184184_TGACCACT_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184185_ACAGTGGT_L004_17480_1 lane4_3600STDY6184186_GCCAATGT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184187_CAGATCTG_L004_17480_1 lane4_3600STDY6184188_ACTTGATG_L004_17480_1 
#>                                       "032"                                      "0211" 
#> lane4_3600STDY6184189_GATCAGCG_L004_17480_1 lane4_3600STDY6184190_TAGCTTGT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184191_GGCTACAG_L004_17480_1 lane4_3600STDY6184192_CTTGTACT_L004_17480_1 
#>                                       "032"                                      "0211" 
#> lane4_3600STDY6184193_TGGTTGTT_L004_17480_1 lane4_3600STDY6184194_TCTCGGTT_L004_17480_1 
#>                                       "032"                                      "0312" 
#> lane4_3600STDY6184195_TAAGCGTT_L004_17480_1 lane4_3600STDY6184196_TCCGTCTT_L004_17480_1 
#>                                      "0312"                                      "0341" 
#> lane4_3600STDY6184197_TGTACCTT_L004_17480_1 lane4_3600STDY6184198_TTCTGTGT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184199_TCTGCTGT_L004_17480_1 lane4_3600STDY6184200_TTGGAGGT_L004_17480_1 
#>                                      "0212"                                      "0212" 
#> lane4_3600STDY6184201_TCGAGCGT_L004_17480_1 lane4_3600STDY6184202_TGATACGT_L004_17480_1 
#>                                      "0313"                                       "032" 
#> lane4_3600STDY6184203_TGCATAGT_L004_17480_1 lane4_3600STDY6184204_TTGACTCT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184205_TGCGATCT_L004_17480_1 lane4_3600STDY6184206_TTCCTGCT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184207_TAGTGACT_L004_17480_1 lane4_3600STDY6184208_TACAGGAT_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184209_TCCTCAAT_L004_17480_1 lane4_3600STDY6184210_TGTGGTTG_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184211_TAGTCTTG_L004_17480_1 lane4_3600STDY6184212_TTCCATTG_L004_17480_1 
#>                                      "0212"                                      "0211" 
#> lane4_3600STDY6184213_TCGAAGTG_L004_17480_1 lane4_3600STDY6184214_TAACGCTG_L004_17480_1 
#>                                      "0221"                                      "0341" 
#> lane4_3600STDY6184215_TTGGTATG_L004_17480_1 lane4_3600STDY6184216_TGAACTGG_L004_17480_1 
#>                                      "0213"                                      "0222" 
#> lane4_3600STDY6184217_TACTTCGG_L004_17480_1 lane4_3600STDY6184218_TCTCACGG_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184219_TCAGGAGG_L004_17480_1 lane4_3600STDY6184220_TAAGTTCG_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184221_TCCAGTCG_L004_17480_1 lane4_3600STDY6184222_TGTATGCG_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184223_TCATTGAG_L004_17480_1 lane4_3600STDY6184224_TGGCTCAG_L004_17480_1 
#>                                      "0212"                                      "0213" 
#> lane4_3600STDY6184225_TATGCCAG_L004_17480_1 lane4_3600STDY6184226_TCAGATTC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184227_TACTAGTC_L004_17480_1 lane4_3600STDY6184228_TTCAGCTC_L004_17480_1 
#>                                      "0212"                                       "032" 
#> lane4_3600STDY6184229_TGTCTATC_L004_17480_1 lane4_3600STDY6184230_TATGTGGC_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184231_TTACTCGC_L004_17480_1 lane4_3600STDY6184232_TCGTTAGC_L004_17480_1 
#>                                      "0213"                                      "0341" 
#> lane4_3600STDY6184233_TACCGAGC_L004_17480_1 lane4_3600STDY6184234_TGTTCTCC_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184235_TTCGCACC_L004_17480_1 lane4_3600STDY6184236_TTGCGTAC_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184237_TCTACGAC_L004_17480_1 lane4_3600STDY6184238_TGACAGAC_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184239_TAGAACAC_L004_17480_1 lane4_3600STDY6184240_TCATCCTA_L004_17480_1 
#>                                      "0212"                                      "0212" 
#> lane4_3600STDY6184241_TGCTGATA_L004_17480_1 lane4_3600STDY6184242_TAGACGGA_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184243_TGTGAAGA_L004_17480_1 lane4_3600STDY6184244_TCTCTTCA_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184245_TTGTTCCA_L004_17480_1 lane4_3600STDY6184246_TGAAGCCA_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184247_TACCACCA_L004_17480_1 lane4_3600STDY6184248_TGCGTGAA_L004_17480_1 
#>                                      "0222"                                      "0212" 
#> lane4_3600STDY6184249_GGTGAGTT_L004_17480_1 lane4_3600STDY6184250_GATCTCTT_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184251_GTGTCCTT_L004_17480_1 lane4_3600STDY6184252_GACGGATT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184253_GCAACATT_L004_17480_1 lane4_3600STDY6184254_GGTCGTGT_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184255_GAATCTGT_L004_17480_1 lane4_3600STDY6184256_GTACATCT_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184257_GAGGTGCT_L004_17480_1 lane4_3600STDY6184258_GCATGGCT_L004_17480_1 
#>                                      "0232"                                      "0211" 
#> lane4_3600STDY6184259_GTTAGCCT_L004_17480_1 lane4_3600STDY6184260_GTCGCTAT_L004_17480_1 
#>                                      "0211"                                      "0222" 
#> lane4_3600STDY6184261_GGAATGAT_L004_17480_1 lane4_3600STDY6184262_GAGCCAAT_L004_17480_1 
#>                                      "0232"                                      "0212" 
#> lane4_3600STDY6184263_GCTCCTTG_L004_17480_1 lane4_3600STDY6184264_GTAAGGTG_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184265_GAGGATGG_L004_17480_1 lane4_3600STDY6184266_GTTGTCGG_L004_17480_1 
#>                                      "0211"                                       "032" 
#> lane4_3600STDY6184267_GGATTAGG_L004_17480_1 lane4_3600STDY6184268_GATAGAGG_L004_17480_1 
#>                                      "0213"                                      "0211" 
#> lane4_3600STDY6184269_GTGTGTCG_L004_17480_1 lane4_3600STDY6184270_GCAATCCG_L004_17480_1 
#>                                      "0341"                                      "0232" 
#> lane4_3600STDY6184271_GACCTTAG_L004_17480_1 lane4_3600STDY6184272_GCCTGTTC_L004_17480_1 
#>                                      "0222"                                      "0211" 
#> lane4_3600STDY6184273_GCACTGTC_L004_17480_1 lane4_3600STDY6184274_GCTAACTC_L004_17480_1 
#>                                      "0211"                                      "0341" 
#> lane4_3600STDY6184275_GATTCATC_L004_17480_1 lane4_3600STDY6184276_GTCTTGGC_L004_17480_1 
#>                                      "0213"                                       "032" 
#> lane4_3600STDY6184277_GTAGAAGC_L004_17480_1 lane4_3600STDY6184278_GATGGTCC_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184279_GTGCTACC_L004_17480_1 lane4_3600STDY6184280_GCGATTAC_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184281_GGTTGGAC_L004_17480_1 lane4_3600STDY6184282_GGCACAAC_L004_17480_1 
#>                                      "0341"                                      "0222" 
#> lane4_3600STDY6184283_GACACTTA_L004_17480_1 lane4_3600STDY6184284_GTGCAGTA_L004_17480_1 
#>                                      "0211"                                      "0341" 
#> lane4_3600STDY6184285_GGAGTCTA_L004_17480_1 lane4_3600STDY6184286_GCTATGGA_L004_17480_1 
#>                                      "0212"                                      "0211" 
#> lane4_3600STDY6184287_GAGTGCGA_L004_17480_1 lane4_3600STDY6184288_GTAACCGA_L004_17480_1 
#>                                      "0212"                                      "0212" 
#> lane4_3600STDY6184289_GGCAAGCA_L004_17480_1 lane4_3600STDY6184290_GCCTTACA_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184291_GAACGACA_L004_17480_1 lane4_3600STDY6184292_GCAGGTAA_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184293_GCGTCGAA_L004_17480_1 lane4_3600STDY6184294_CGTTCGGT_L004_17480_1 
#>                                      "0341"                                      "0222" 
#> lane4_3600STDY6184295_CACCAGGT_L004_17480_1 lane4_3600STDY6184296_CTGCGAGT_L004_17480_1 
#>                                      "0211"                                      "0341" 
#> lane4_3600STDY6184297_CCGTATCT_L004_17480_1 lane4_3600STDY6184298_CGCTTCCT_L004_17480_1 
#>                                      "0211"                                      "0341" 
#> lane4_3600STDY6184299_CAAGACCT_L004_17480_1 lane4_3600STDY6184300_CACACACT_L004_17480_1 
#>                                      "0211"                                       "032" 
#> lane4_3600STDY6184301_CCTAGTAT_L004_17480_1 lane4_3600STDY6184302_CCACCGAT_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184303_CTTCACAT_L004_17480_1 lane4_3600STDY6184304_CTATCATG_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184305_CATGAATG_L004_17480_1 lane4_3600STDY6184306_CCACTTGG_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184307_CTGTACGG_L004_17480_1 lane4_3600STDY6184308_CTAGATAG_L004_17480_1 
#>                                      "0211"                                      "0341" 
#> lane4_3600STDY6184309_CACTCGAG_L004_17480_1 lane4_3600STDY6184310_CCGACAAG_L004_17480_1 
#>                                      "0222"                                       "032" 
#> lane4_3600STDY6184311_CTTGCTTC_L004_17480_1 lane4_3600STDY6184312_CATAGGTC_L004_17480_1 
#>                                      "0212"                                      "0222" 
#> lane4_3600STDY6184313_CACATTGC_L004_17480_1 lane4_3600STDY6184314_CGCTAAGC_L004_17480_1 
#>                                      "0213"                                      "0212" 
#> lane4_3600STDY6184315_CAACCTCC_L004_17480_1 lane4_3600STDY6184316_CAGCTGAC_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184317_CTCAAGAC_L004_17480_1 lane4_3600STDY6184318_CGTGTCAC_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184319_CCATGCAC_L004_17480_1 lane4_3600STDY6184320_CGTTACTA_L004_17480_1 
#>                                      "0222"                                      "0341" 
#> lane4_3600STDY6184321_CAAGTAGA_L004_17480_1 lane4_3600STDY6184322_CTCTCTCA_L004_17480_1 
#>                                      "0213"                                      "0211" 
#> lane4_3600STDY6184323_CGACTGCA_L004_17480_1 lane4_3600STDY6184324_CCTGAGCA_L004_17480_1 
#>                                      "0212"                                      "0222" 
#> lane4_3600STDY6184325_CAGGCTAA_L004_17480_1 lane4_3600STDY6184326_CGGAGGAA_L004_17480_1 
#>                                       "032"                                      "0211" 
#> lane4_3600STDY6184327_AGGAGATT_L004_17480_1 lane4_3600STDY6184328_AGGCAGCT_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184329_ACGTTCAT_L004_17480_1 lane4_3600STDY6184330_AACGTGTG_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184331_AGACCGTG_L004_17480_1 lane4_3600STDY6184332_ACCTCTGG_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184333_ATCCTAGG_L004_17480_1 lane4_3600STDY6184334_ATCAACCG_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184335_AGGTCACG_L004_17480_1 lane4_3600STDY6184336_ACTGTTAG_L004_17480_1 
#>                                       "032"                                      "0211" 
#> lane4_3600STDY6184337_AAGAGTAG_L004_17480_1 lane4_3600STDY6184338_ATTCGGAG_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184339_ACGCAATC_L004_17480_1 lane4_3600STDY6184340_ACAAGTGC_L004_17480_1 
#>                                      "0213"                                      "0211" 
#> lane4_3600STDY6184341_ATGGATCC_L004_17480_1 lane4_3600STDY6184342_AGAGGACC_L004_17480_1 
#>                                      "0212"                                      "0222" 
#> lane4_3600STDY6184343_ATCTCCAC_L004_17480_1 lane4_3600STDY6184344_ATTGGCTA_L004_17480_1 
#>                                      "0213"                                      "0212" 
#> lane4_3600STDY6184345_AATCCTGA_L004_17480_1 lane4_3600STDY6184346_AGGATTCA_L004_17480_1 
#>                                       "032"                                      "0222" 
#> lane4_3600STDY6184347_AACTGGCA_L004_17480_1 lane4_3600STDY6184348_ACAACGCA_L004_17480_1 
#>                                      "0221"                                      "0222" 
#> lane4_3600STDY6184349_CGGAAACA_L004_17480_1 lane4_3600STDY6184350_AATGAATT_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184351_TAGGACCC_L004_17480_1 lane4_3600STDY6184352_TCTCAGTG_L004_17480_1 
#>                                      "0341"                                      "0222" 
#> lane4_3600STDY6184353_CATGGGAA_L004_17480_1 lane4_3600STDY6184354_CCTAAGAT_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184355_CTCAGATA_L004_17480_1 lane4_3600STDY6184356_CCCATAGG_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184357_GCTATGAC_L004_17480_1 lane4_3600STDY6184358_GCTGTGAA_L004_17480_1 
#>                                      "0222"                                      "0222" 
#> lane4_3600STDY6184359_ACCTTCAA_L004_17480_1 lane4_3600STDY6184360_ACAAAGCC_L004_17480_1 
#>                                      "0223"                                      "0221" 
#> lane4_3600STDY6184361_CAAAACCG_L004_17480_1 lane4_3600STDY6184362_GCTGGACA_L004_17480_1 
#>                                      "0211"                                       "032" 
#> lane4_3600STDY6184363_AAGTCGTA_L004_17480_1 lane4_3600STDY6184364_CATCCGTA_L004_17480_1 
#>                                      "0211"                                      "0232" 
#> lane4_3600STDY6184365_TTGTGTCT_L004_17480_1 lane4_3600STDY6184366_TGCTCTAG_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184367_ACCCAACA_L004_17480_1 lane4_3600STDY6184368_CGATCTGA_L004_17480_1 
#>                                      "0222"                                      "0211" 
#> lane4_3600STDY6184369_GTTCCACG_L004_17480_1 lane4_3600STDY6184370_ACTCTTTC_L004_17480_1 
#>                                      "0212"                                      "0213" 
#> lane4_3600STDY6184371_TATTGGAG_L004_17480_1 lane4_3600STDY6184372_TAAACATA_L004_17480_1 
#>                                      "0221"                                      "0221" 
#> lane4_3600STDY6184373_GTAAGATA_L004_17480_1 lane4_3600STDY6184374_TACCGCAA_L004_17480_1 
#>                                      "0223"                                       "032" 
#> lane4_3600STDY6184375_TATCTCCT_L004_17480_1 lane4_3600STDY6184376_TGTCATCT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184377_ATAGCTCT_L004_17480_1 lane4_3600STDY6184378_AGTCCAAC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184379_TTTGGGCA_L004_17480_1 lane4_3600STDY6184380_TCTGACGC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184381_TGTCGACT_L004_17480_1 lane4_3600STDY6184382_GTCACGTA_L004_17480_1 
#>                                       "032"                                      "0313" 
#> lane4_3600STDY6184383_TTGAGCGA_L004_17480_1 lane4_3600STDY6184384_GAGACATA_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184385_GTCAAGCT_L004_17480_1 lane4_3600STDY6184386_AGCAAGTT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184387_GACGCTCA_L004_17480_1 lane4_3600STDY6184388_ACGGCAGC_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184389_AGAACTGA_L004_17480_1 lane4_3600STDY6184390_CGCCTTTG_L004_17480_1 
#>                                      "0212"                                      "0222" 
#> lane4_3600STDY6184391_TAAGGTCA_L004_17480_1 lane4_3600STDY6184392_ACGTTGGC_L004_17480_1 
#>                                      "0222"                                      "0212" 
#> lane4_3600STDY6184393_CCAGCTTA_L004_17480_1 lane4_3600STDY6184394_GAATCCTA_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184395_ACTTCGTA_L004_17480_1 lane4_3600STDY6184396_TAGTCGGT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184397_CGCACGAG_L004_17480_1 lane4_3600STDY6184398_ACGTACTA_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184399_AGCGCCAA_L004_17480_1 lane4_3600STDY6184400_GCCTGCCC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184401_AGGACGAT_L004_17480_1 lane4_3600STDY6184402_CTTGACCG_L004_17480_1 
#>                                      "0213"                                       "032" 
#> lane4_3600STDY6184403_AGGTCTAA_L004_17480_1 lane4_3600STDY6184404_CGAGATCC_L004_17480_1 
#>                                      "0213"                                       "032" 
#> lane4_3600STDY6184405_ATTAGCGG_L004_17480_1 lane4_3600STDY6184406_GCGCTGAT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184407_TGCTGAAC_L004_17480_1 lane4_3600STDY6184408_GAGGGCAG_L004_17480_1 
#>                                       "032"                                      "0213" 
#> lane4_3600STDY6184409_GTTTTCAC_L004_17480_1 lane4_3600STDY6184410_GAGATGCC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184411_TTGAGAAG_L004_17480_1 lane4_3600STDY6184412_GCATCCGG_L004_17480_1 
#>                                       "032"                                      "0232" 
#> lane4_3600STDY6184413_GTCACCAG_L004_17480_1 lane4_3600STDY6184414_GAGGTCGC_L004_17480_1 
#>                                      "0211"                                      "0222" 
#> lane4_3600STDY6184415_AAGGGGTA_L004_17480_1 lane4_3600STDY6184416_TTTTACGT_L004_17480_1 
#>                                      "0212"                                      "0211" 
#> lane4_3600STDY6184417_TTCCTACA_L004_17480_1 lane4_3600STDY6184418_AGTGTAGT_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184419_GTGGCCAA_L004_17480_1 lane4_3600STDY6184420_AAATACTC_L004_17480_1 
#>                                      "0212"                                       "032" 
#> lane4_3600STDY6184421_CACCCGTC_L004_17480_1 lane4_3600STDY6184422_TCGTGGTT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184423_ACTTGGGG_L004_17480_1 lane4_3600STDY6184424_GGCTGCTT_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184425_CAGGGTCG_L004_17480_1 lane4_3600STDY6184426_CTCGTCGA_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184427_TCTACAGT_L004_17480_1 lane4_3600STDY6184428_CTTCTAGA_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184429_AACGGCTT_L004_17480_1 lane4_3600STDY6184430_ATAAGACT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184431_GTTTTTCG_L004_17480_1 lane4_3600STDY6184432_ATTGGTAT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184433_CGCCAGTA_L004_17480_1 lane4_3600STDY6184434_AAGCCGAA_L004_17480_1 
#>                                      "0223"                                       "032" 
#> lane4_3600STDY6184435_TGACCCAC_L004_17480_1 lane4_3600STDY6184436_ATTGCACA_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184437_CTTTTGAT_L004_17480_1 lane4_3600STDY6184438_TAGCGAGA_L004_17480_1 
#>                                      "0213"                                      "0222" 
#> lane4_3600STDY6184439_TTCGCAGG_L004_17480_1 lane4_3600STDY6184440_TAGTTATT_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184441_TCCTCCGA_L004_17480_1 lane4_3600STDY6184442_GCGGGTCT_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184443_GATTCTAT_L004_17480_1 lane4_3600STDY6184444_ATGCAAAG_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184445_GTCTGAGG_L004_17480_1 lane4_3600STDY6184446_TCTGGCGA_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184447_AATTTGCG_L004_17480_1 lane4_3600STDY6184448_TGGGTTGG_L004_17480_1 
#>                                      "0222"                                      "0232" 
#> lane4_3600STDY6184449_AGTTGAAA_L004_17480_1 lane4_3600STDY6184450_GACCGGAA_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184451_GATCGAAC_L004_17480_1 lane4_3600STDY6184452_GTATAGGG_L004_17480_1 
#>                                      "0342"                                      "0341" 
#> lane4_3600STDY6184453_GGTAAGAG_L004_17480_1 lane4_3600STDY6184454_AGTCCGAT_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184455_ATACAGGC_L004_17480_1 lane4_3600STDY6184456_TGAGACTC_L004_17480_1 
#>                                      "0213"                                      "0222" 
#> lane4_3600STDY6184457_ACTCAGGA_L004_17480_1 lane4_3600STDY6184458_GTGTCTGA_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184459_CTTGAATC_L004_17480_1 lane4_3600STDY6184460_CCGCATGA_L004_17480_1 
#>                                      "0211"                                      "0222" 
#> lane4_3600STDY6184461_AAGTAACA_L004_17480_1 lane4_3600STDY6184462_GTGGTACT_L004_17480_1 
#>                                      "0222"                                      "0222" 
#> lane4_3600STDY6184463_AGCTGTGC_L004_17480_1 lane4_3600STDY6184464_TTACCTTC_L004_17480_1 
#>                                      "0222"                                      "0222" 
#> lane4_3600STDY6184465_TCCGGGTA_L004_17480_1 lane4_3600STDY6184466_CTACGTAA_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184467_TCGGACCG_L004_17480_1 lane4_3600STDY6184468_ATGCGTCG_L004_17480_1 
#>                                      "0211"                                       "032" 
#> lane4_3600STDY6184469_TTCTTAGC_L004_17480_1 lane4_3600STDY6184470_TGAGTAAG_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184471_AAGTGATA_L004_17480_1 lane4_3600STDY6184472_TCGATGCG_L004_17480_1 
#>                                      "0213"                                      "0341" 
#> lane4_3600STDY6184473_TATTCTGG_L004_17480_1 lane4_3600STDY6184474_AGCCGTGA_L004_17480_1 
#>                                      "0213"                                      "0211" 
#> lane4_3600STDY6184475_AAGCCTTC_L004_17480_1 lane4_3600STDY6184476_AGGTATCC_L004_17480_1 
#>                                      "0213"                                      "0341" 
#> lane4_3600STDY6184477_AGGATCTC_L004_17480_1 lane4_3600STDY6184478_CTGTTTGA_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184479_GGAATTTC_L004_17480_1 lane4_3600STDY6184480_TTGGAGCA_L004_17480_1 
#>                                      "0341"                                      "0213" 
#> lane4_3600STDY6184481_AAGGTCTG_L004_17480_1 lane4_3600STDY6184482_AATTAGGC_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184483_AATCGGGT_L004_17480_1 lane4_3600STDY6184484_AGGTAGAC_L004_17480_1 
#>                                      "0212"                                      "0212" 
#> lane4_3600STDY6184485_CTTATTCC_L004_17480_1 lane4_3600STDY6184486_CAGGCTCT_L004_17480_1 
#>                                      "0341"                                      "0222" 
#> lane4_3600STDY6184487_AAAGCACG_L004_17480_1 lane4_3600STDY6184488_GTATACAC_L004_17480_1 
#>                                      "0222"                                      "0211" 
#> lane4_3600STDY6184489_GGACATAT_L004_17480_1 lane4_3600STDY6184490_CGGTTGGG_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184491_GTCCGTGA_L004_17480_1 lane4_3600STDY6184492_GCCGAACC_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184493_ACTTTACT_L004_17480_1 lane4_3600STDY6184494_GGGTCCAT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184495_ATAACTAG_L004_17480_1 lane4_3600STDY6184496_AATAGAGA_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184497_TCACCATT_L004_17480_1 lane4_3600STDY6184498_CGCCTGAT_L004_17480_1 
#>                                      "0341"                                      "0222" 
#> lane4_3600STDY6184499_GCGTGAAC_L004_17480_1 lane4_3600STDY6184500_TAAGGGTG_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184501_GGTGTCGA_L004_17480_1 lane4_3600STDY6184502_CCGTTAGG_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184503_TGGCAAAA_L004_17480_1 lane4_3600STDY6184504_CCTACCCG_L004_17480_1 
#>                                      "0213"                                      "0222" 
#> lane4_3600STDY6184505_AACAGCGC_L004_17480_1 lane4_3600STDY6184506_TATACATC_L004_17480_1 
#>                                      "0213"                                      "0341" 
#> lane4_3600STDY6184507_AAGCGACT_L004_17480_1 lane4_3600STDY6184508_GAAGCGCA_L004_17480_1 
#>                                      "0211"                                      "0222" 
#> lane4_3600STDY6184509_ACCTCTAC_L004_17480_1 lane4_3600STDY6184510_GATTGCGT_L004_17480_1 
#>                                      "0222"                                      "0232" 
#> lane4_3600STDY6184511_GCTGGTTG_L004_17480_1 lane4_3600STDY6184512_ATCGTCCT_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184513_GGACACGG_L004_17480_1 lane4_3600STDY6184514_CGCACCTA_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184515_CTTCGGCT_L004_17480_1 lane4_3600STDY6184516_CGAATCGA_L004_17480_1 
#>                                      "0212"                                       "032" 
#> lane4_3600STDY6184517_TAACAACT_L004_17480_1 lane4_3600STDY6184518_AGCTCTTT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184519_TAATCCCT_L004_17480_1 lane4_3600STDY6184520_AGGACACT_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184521_TTACACTA_L004_17480_1 lane4_3600STDY6184522_AAACATCA_L004_17480_1 
#>                                      "0341"                                      "0213" 
#> lane4_3600STDY6184523_CCATAGCT_L004_17480_1 lane4_3600STDY6184524_GTTATGGC_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184525_ATCCCCTA_L004_17480_1 lane4_3600STDY6184526_CATACTAC_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184527_CAATTGTT_L004_17480_1 lane4_3600STDY6184528_AAACCCGT_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184529_CAGATTTC_L004_17480_1 lane4_3600STDY6184530_GCGTAGGT_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184531_GGCATTCG_L004_17480_1 lane4_3600STDY6184532_TGGGGCTT_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184533_CTGACTAC_L004_17480_1 lane4_3600STDY6184534_AACTTTTA_L004_17480_1 
#>                                      "0212"                                      "0211" 
#> lane4_3600STDY6184535_AGGGATTC_L004_17480_1 lane4_3600STDY6184536_CCGAGTAG_L004_17480_1 
#>                                      "0221"                                      "0212" 
#> lane4_3600STDY6184537_GGGGACTA_L004_17480_1 lane4_3600STDY6184538_GGAGTTGA_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184539_AGCTCATC_L004_17480_1 lane4_3600STDY6184540_TAATCAAC_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184541_ACTGGTCG_L004_17480_1 lane4_3600STDY6184542_GACGATTG_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184543_AGCGATGA_L004_17480_1 lane4_3600STDY6184544_GAAGAGAT_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184545_CGTATGCA_L004_17480_1 lane4_3600STDY6184546_CACGTGCG_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184547_GCTTAAAC_L004_17480_1 lane4_3600STDY6184548_GTTCCGCA_L004_17480_1 
#>                                       "032"                                      "0221" 
#> lane4_3600STDY6184549_GTATCGTC_L004_17480_1 lane4_3600STDY6184550_GTCCTCAC_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184551_GTACGGAC_L004_17480_1 lane4_3600STDY6184552_CATTTTGC_L004_17480_1 
#>                                      "0221"                                      "0221" 
#> lane4_3600STDY6184553_TCCTCTCT_L004_17480_1 lane4_3600STDY6184554_AGCAACGA_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184555_ACAGAAGA_L004_17480_1 lane4_3600STDY6184556_CGACCCTT_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184557_CTGCCTAG_L004_17480_1 lane4_3600STDY6184558_GAGCGCAT_L004_17480_1 
#>                                      "0212"                                      "0222" 
#> lane4_3600STDY6184559_AACTTATC_L004_17480_1 lane4_3600STDY6184560_CCGATGTA_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184561_TTACTACC_L004_17480_1 lane4_3600STDY6184562_CAAGGAGC_L004_17480_1 
#>                                      "0341"                                      "0221" 
#> lane4_3600STDY6184563_TGGTTGAC_L004_17480_1 lane4_3600STDY6184564_ACCTGCTG_L004_17480_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6183797_ATCACGTT_L001_17592_1 lane1_3600STDY6183798_CGATGTTT_L001_17592_1 
#>                                      "0221"                                      "0312" 
#> lane1_3600STDY6183799_TTAGGCAT_L001_17592_1 lane1_3600STDY6183800_TGACCACT_L001_17592_1 
#>                                      "0312"                                      "0312" 
#> lane1_3600STDY6183801_ACAGTGGT_L001_17592_1 lane1_3600STDY6183802_GCCAATGT_L001_17592_1 
#>                                      "0312"                                      "0312" 
#> lane1_3600STDY6183803_CAGATCTG_L001_17592_1 lane1_3600STDY6183804_ACTTGATG_L001_17592_1 
#>                                      "0312"                                      "0311" 
#> lane1_3600STDY6183805_GATCAGCG_L001_17592_1 lane1_3600STDY6183806_TAGCTTGT_L001_17592_1 
#>                                      "0312"                                      "0312" 
#> lane1_3600STDY6183807_GGCTACAG_L001_17592_1 lane1_3600STDY6183808_CTTGTACT_L001_17592_1 
#>                                      "0312"                                      "0223" 
#> lane1_3600STDY6183809_TGGTTGTT_L001_17592_1 lane1_3600STDY6183810_TCTCGGTT_L001_17592_1 
#>                                      "0311"                                      "0221" 
#> lane1_3600STDY6183811_TAAGCGTT_L001_17592_1 lane1_3600STDY6183812_TCCGTCTT_L001_17592_1 
#>                                      "0312"                                      "0313" 
#> lane1_3600STDY6183813_TGTACCTT_L001_17592_1 lane1_3600STDY6183814_TTCTGTGT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183815_TCTGCTGT_L001_17592_1 lane1_3600STDY6183816_TTGGAGGT_L001_17592_1 
#>                                       "033"                                      "0221" 
#> lane1_3600STDY6183817_TCGAGCGT_L001_17592_1 lane1_3600STDY6183818_TGATACGT_L001_17592_1 
#>                                      "0311"                                      "0311" 
#> lane1_3600STDY6183819_TGCATAGT_L001_17592_1 lane1_3600STDY6183820_TTGACTCT_L001_17592_1 
#>                                      "0313"                                      "0221" 
#> lane1_3600STDY6183821_TGCGATCT_L001_17592_1 lane1_3600STDY6183822_TTCCTGCT_L001_17592_1 
#>                                      "0312"                                       "033" 
#> lane1_3600STDY6183823_TAGTGACT_L001_17592_1 lane1_3600STDY6183824_TACAGGAT_L001_17592_1 
#>                                      "0312"                                      "0312" 
#> lane1_3600STDY6183825_TCCTCAAT_L001_17592_1 lane1_3600STDY6183826_TGTGGTTG_L001_17592_1 
#>                                      "0312"                                      "0312" 
#> lane1_3600STDY6183827_TAGTCTTG_L001_17592_1 lane1_3600STDY6183828_TTCCATTG_L001_17592_1 
#>                                      "0312"                                      "0312" 
#> lane1_3600STDY6183829_TCGAAGTG_L001_17592_1 lane1_3600STDY6183830_TAACGCTG_L001_17592_1 
#>                                      "0312"                                      "0312" 
#> lane1_3600STDY6183831_TTGGTATG_L001_17592_1 lane1_3600STDY6183832_TGAACTGG_L001_17592_1 
#>                                      "0312"                                      "0312" 
#> lane1_3600STDY6183833_TACTTCGG_L001_17592_1 lane1_3600STDY6183834_TCTCACGG_L001_17592_1 
#>                                      "0311"                                      "0312" 
#> lane1_3600STDY6183835_TCAGGAGG_L001_17592_1 lane1_3600STDY6183836_TAAGTTCG_L001_17592_1 
#>                                      "0313"                                      "0311" 
#> lane1_3600STDY6183837_TCCAGTCG_L001_17592_1 lane1_3600STDY6183838_TGTATGCG_L001_17592_1 
#>                                      "0311"                                       "033" 
#> lane1_3600STDY6183839_TCATTGAG_L001_17592_1 lane1_3600STDY6183840_TGGCTCAG_L001_17592_1 
#>                                      "0231"                                       "033" 
#> lane1_3600STDY6183841_TATGCCAG_L001_17592_1 lane1_3600STDY6183842_TCAGATTC_L001_17592_1 
#>                                      "0231"                                      "0311" 
#> lane1_3600STDY6183843_TACTAGTC_L001_17592_1 lane1_3600STDY6183844_TTCAGCTC_L001_17592_1 
#>                                      "0313"                                      "0313" 
#> lane1_3600STDY6183845_TGTCTATC_L001_17592_1 lane1_3600STDY6183846_TATGTGGC_L001_17592_1 
#>                                      "0312"                                      "0312" 
#> lane1_3600STDY6183847_TTACTCGC_L001_17592_1 lane1_3600STDY6183848_TCGTTAGC_L001_17592_1 
#>                                       "033"                                      "0311" 
#> lane1_3600STDY6183849_TACCGAGC_L001_17592_1 lane1_3600STDY6183850_TGTTCTCC_L001_17592_1 
#>                                      "0312"                                      "0311" 
#> lane1_3600STDY6183851_TTCGCACC_L001_17592_1 lane1_3600STDY6183852_TTGCGTAC_L001_17592_1 
#>                                      "0312"                                      "0312" 
#> lane1_3600STDY6183853_TCTACGAC_L001_17592_1 lane1_3600STDY6183854_TGACAGAC_L001_17592_1 
#>                                      "0311"                                      "0312" 
#> lane1_3600STDY6183855_TAGAACAC_L001_17592_1 lane1_3600STDY6183856_TCATCCTA_L001_17592_1 
#>                                      "0311"                                      "0312" 
#> lane1_3600STDY6183857_TGCTGATA_L001_17592_1 lane1_3600STDY6183858_TAGACGGA_L001_17592_1 
#>                                      "0232"                                       "033" 
#> lane1_3600STDY6183859_TGTGAAGA_L001_17592_1 lane1_3600STDY6183860_TCTCTTCA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183861_TTGTTCCA_L001_17592_1 lane1_3600STDY6183862_TGAAGCCA_L001_17592_1 
#>                                      "0311"                                       "033" 
#> lane1_3600STDY6183863_TACCACCA_L001_17592_1 lane1_3600STDY6183864_TGCGTGAA_L001_17592_1 
#>                                       "033"                                      "0232" 
#> lane1_3600STDY6183865_GGTGAGTT_L001_17592_1 lane1_3600STDY6183866_GATCTCTT_L001_17592_1 
#>                                      "0231"                                      "0311" 
#> lane1_3600STDY6183867_GTGTCCTT_L001_17592_1 lane1_3600STDY6183868_GACGGATT_L001_17592_1 
#>                                      "0313"                                       "033" 
#> lane1_3600STDY6183869_GCAACATT_L001_17592_1 lane1_3600STDY6183870_GGTCGTGT_L001_17592_1 
#>                                      "0312"                                      "0311" 
#> lane1_3600STDY6183871_GAATCTGT_L001_17592_1 lane1_3600STDY6183872_GTACATCT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183873_GAGGTGCT_L001_17592_1 lane1_3600STDY6183874_GCATGGCT_L001_17592_1 
#>                                      "0311"                                      "0231" 
#> lane1_3600STDY6183875_GTTAGCCT_L001_17592_1 lane1_3600STDY6183876_GTCGCTAT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183877_GGAATGAT_L001_17592_1 lane1_3600STDY6183878_GAGCCAAT_L001_17592_1 
#>                                      "0313"                                      "0312" 
#> lane1_3600STDY6183879_GCTCCTTG_L001_17592_1 lane1_3600STDY6183880_GTAAGGTG_L001_17592_1 
#>                                       "033"                                      "0311" 
#> lane1_3600STDY6183881_GAGGATGG_L001_17592_1 lane1_3600STDY6183882_GTTGTCGG_L001_17592_1 
#>                                      "0232"                                      "0231" 
#> lane1_3600STDY6183883_GGATTAGG_L001_17592_1 lane1_3600STDY6183884_GATAGAGG_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6183885_GTGTGTCG_L001_17592_1 lane1_3600STDY6183886_GCAATCCG_L001_17592_1 
#>                                      "0232"                                      "0222" 
#> lane1_3600STDY6183887_GACCTTAG_L001_17592_1 lane1_3600STDY6183888_GCCTGTTC_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6183889_GCACTGTC_L001_17592_1 lane1_3600STDY6183890_GCTAACTC_L001_17592_1 
#>                                      "0232"                                       "033" 
#> lane1_3600STDY6183891_GATTCATC_L001_17592_1 lane1_3600STDY6183892_GTCTTGGC_L001_17592_1 
#>                                      "0231"                                       "033" 
#> lane1_3600STDY6183893_GTAGAAGC_L001_17592_1 lane1_3600STDY6183894_GATGGTCC_L001_17592_1 
#>                                      "0312"                                      "0311" 
#> lane1_3600STDY6183895_GTGCTACC_L001_17592_1 lane1_3600STDY6183896_GCGATTAC_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183897_GGTTGGAC_L001_17592_1 lane1_3600STDY6183898_GGCACAAC_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6183899_GACACTTA_L001_17592_1 lane1_3600STDY6183900_GTGCAGTA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183901_GGAGTCTA_L001_17592_1 lane1_3600STDY6183902_GCTATGGA_L001_17592_1 
#>                                      "0311"                                      "0311" 
#> lane1_3600STDY6183903_GAGTGCGA_L001_17592_1 lane1_3600STDY6183904_GTAACCGA_L001_17592_1 
#>                                       "033"                                      "0311" 
#> lane1_3600STDY6183905_GGCAAGCA_L001_17592_1 lane1_3600STDY6183906_GCCTTACA_L001_17592_1 
#>                                      "0232"                                       "033" 
#> lane1_3600STDY6183907_GAACGACA_L001_17592_1 lane1_3600STDY6183908_GCAGGTAA_L001_17592_1 
#>                                       "033"                                      "0232" 
#> lane1_3600STDY6183909_GCGTCGAA_L001_17592_1 lane1_3600STDY6183910_CGTTCGGT_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6183911_CACCAGGT_L001_17592_1 lane1_3600STDY6183912_CTGCGAGT_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6183913_CCGTATCT_L001_17592_1 lane1_3600STDY6183914_CGCTTCCT_L001_17592_1 
#>                                      "0232"                                      "0231" 
#> lane1_3600STDY6183915_CAAGACCT_L001_17592_1 lane1_3600STDY6183916_CACACACT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183917_CCTAGTAT_L001_17592_1 lane1_3600STDY6183918_CCACCGAT_L001_17592_1 
#>                                      "0312"                                      "0312" 
#> lane1_3600STDY6183919_CTTCACAT_L001_17592_1 lane1_3600STDY6183920_CTATCATG_L001_17592_1 
#>                                       "033"                                      "0312" 
#> lane1_3600STDY6183921_CATGAATG_L001_17592_1 lane1_3600STDY6183922_CCACTTGG_L001_17592_1 
#>                                      "0311"                                       "033" 
#> lane1_3600STDY6183923_CTGTACGG_L001_17592_1 lane1_3600STDY6183924_CTAGATAG_L001_17592_1 
#>                                      "0311"                                       "033" 
#> lane1_3600STDY6183925_CACTCGAG_L001_17592_1 lane1_3600STDY6183926_CCGACAAG_L001_17592_1 
#>                                      "0311"                                      "0312" 
#> lane1_3600STDY6183927_CTTGCTTC_L001_17592_1 lane1_3600STDY6183928_CATAGGTC_L001_17592_1 
#>                                      "0232"                                      "0212" 
#> lane1_3600STDY6183929_CACATTGC_L001_17592_1 lane1_3600STDY6183930_CGCTAAGC_L001_17592_1 
#>                                      "0232"                                       "033" 
#> lane1_3600STDY6183931_CAACCTCC_L001_17592_1 lane1_3600STDY6183932_CAGCTGAC_L001_17592_1 
#>                                       "033"                                      "0232" 
#> lane1_3600STDY6183933_CTCAAGAC_L001_17592_1 lane1_3600STDY6183934_CGTGTCAC_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6183935_CCATGCAC_L001_17592_1 lane1_3600STDY6183936_CGTTACTA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183937_CAAGTAGA_L001_17592_1 lane1_3600STDY6183938_CTCTCTCA_L001_17592_1 
#>                                       "033"                                      "0313" 
#> lane1_3600STDY6183939_CGACTGCA_L001_17592_1 lane1_3600STDY6183940_CCTGAGCA_L001_17592_1 
#>                                       "033"                                      "0313" 
#> lane1_3600STDY6183941_CAGGCTAA_L001_17592_1 lane1_3600STDY6183942_CGGAGGAA_L001_17592_1 
#>                                      "0312"                                       "033" 
#> lane1_3600STDY6183943_AGGAGATT_L001_17592_1 lane1_3600STDY6183944_AGGCAGCT_L001_17592_1 
#>                                      "0311"                                      "0213" 
#> lane1_3600STDY6183945_ACGTTCAT_L001_17592_1 lane1_3600STDY6183946_AACGTGTG_L001_17592_1 
#>                                       "033"                                      "0312" 
#> lane1_3600STDY6183947_AGACCGTG_L001_17592_1 lane1_3600STDY6183948_ACCTCTGG_L001_17592_1 
#>                                      "0312"                                      "0311" 
#> lane1_3600STDY6183949_ATCCTAGG_L001_17592_1 lane1_3600STDY6183950_ATCAACCG_L001_17592_1 
#>                                      "0313"                                      "0312" 
#> lane1_3600STDY6183951_AGGTCACG_L001_17592_1 lane1_3600STDY6183952_ACTGTTAG_L001_17592_1 
#>                                      "0311"                                      "0221" 
#> lane1_3600STDY6183953_AAGAGTAG_L001_17592_1 lane1_3600STDY6183954_ATTCGGAG_L001_17592_1 
#>                                      "0231"                                      "0313" 
#> lane1_3600STDY6183955_ACGCAATC_L001_17592_1 lane1_3600STDY6183956_ACAAGTGC_L001_17592_1 
#>                                       "033"                                      "0232" 
#> lane1_3600STDY6183957_ATGGATCC_L001_17592_1 lane1_3600STDY6183958_AGAGGACC_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6183959_ATCTCCAC_L001_17592_1 lane1_3600STDY6183960_ATTGGCTA_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6183961_AATCCTGA_L001_17592_1 lane1_3600STDY6183962_AGGATTCA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183963_AACTGGCA_L001_17592_1 lane1_3600STDY6183964_ACAACGCA_L001_17592_1 
#>                                       "033"                                      "0223" 
#> lane1_3600STDY6183965_CGGAAACA_L001_17592_1 lane1_3600STDY6183966_AATGAATT_L001_17592_1 
#>                                      "0222"                                       "033" 
#> lane1_3600STDY6183967_TAGGACCC_L001_17592_1 lane1_3600STDY6183968_TCTCAGTG_L001_17592_1 
#>                                      "0311"                                       "033" 
#> lane1_3600STDY6183969_CATGGGAA_L001_17592_1 lane1_3600STDY6183970_CCTAAGAT_L001_17592_1 
#>                                      "0311"                                      "0232" 
#> lane1_3600STDY6183971_CTCAGATA_L001_17592_1 lane1_3600STDY6183972_CCCATAGG_L001_17592_1 
#>                                      "0311"                                       "033" 
#> lane1_3600STDY6183973_GCTATGAC_L001_17592_1 lane1_3600STDY6183974_GCTGTGAA_L001_17592_1 
#>                                      "0311"                                      "0311" 
#> lane1_3600STDY6183975_ACCTTCAA_L001_17592_1 lane1_3600STDY6183976_ACAAAGCC_L001_17592_1 
#>                                      "0231"                                      "0211" 
#> lane1_3600STDY6183977_CAAAACCG_L001_17592_1 lane1_3600STDY6183978_GCTGGACA_L001_17592_1 
#>                                      "0232"                                      "0231" 
#> lane1_3600STDY6183979_AAGTCGTA_L001_17592_1 lane1_3600STDY6183980_CATCCGTA_L001_17592_1 
#>                                      "0232"                                      "0231" 
#> lane1_3600STDY6183981_TTGTGTCT_L001_17592_1 lane1_3600STDY6183982_TGCTCTAG_L001_17592_1 
#>                                      "0231"                                      "0232" 
#> lane1_3600STDY6183983_ACCCAACA_L001_17592_1 lane1_3600STDY6183984_CGATCTGA_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6183985_GTTCCACG_L001_17592_1 lane1_3600STDY6183986_ACTCTTTC_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6183987_TATTGGAG_L001_17592_1 lane1_3600STDY6183988_TAAACATA_L001_17592_1 
#>                                      "0231"                                      "0221" 
#> lane1_3600STDY6183989_GTAAGATA_L001_17592_1 lane1_3600STDY6183990_TACCGCAA_L001_17592_1 
#>                                      "0221"                                      "0312" 
#> lane1_3600STDY6183991_TATCTCCT_L001_17592_1 lane1_3600STDY6183992_TGTCATCT_L001_17592_1 
#>                                      "0311"                                      "0231" 
#> lane1_3600STDY6183993_ATAGCTCT_L001_17592_1 lane1_3600STDY6183994_AGTCCAAC_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6183995_TTTGGGCA_L001_17592_1 lane1_3600STDY6183996_TCTGACGC_L001_17592_1 
#>                                      "0311"                                      "0231" 
#> lane1_3600STDY6183997_TGTCGACT_L001_17592_1 lane1_3600STDY6183998_GTCACGTA_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6183999_TTGAGCGA_L001_17592_1 lane1_3600STDY6184000_GAGACATA_L001_17592_1 
#>                                      "0231"                                      "0313" 
#> lane1_3600STDY6184001_GTCAAGCT_L001_17592_1 lane1_3600STDY6184002_AGCAAGTT_L001_17592_1 
#>                                      "0221"                                      "0312" 
#> lane1_3600STDY6184003_GACGCTCA_L001_17592_1 lane1_3600STDY6184004_ACGGCAGC_L001_17592_1 
#>                                      "0313"                                      "0312" 
#> lane1_3600STDY6184005_AGAACTGA_L001_17592_1 lane1_3600STDY6184006_CGCCTTTG_L001_17592_1 
#>                                      "0313"                                      "0311" 
#> lane1_3600STDY6184007_TAAGGTCA_L001_17592_1 lane1_3600STDY6184008_ACGTTGGC_L001_17592_1 
#>                                       "033"                                      "0311" 
#> lane1_3600STDY6184009_CCAGCTTA_L001_17592_1 lane1_3600STDY6184010_GAATCCTA_L001_17592_1 
#>                                      "0311"                                      "0311" 
#> lane1_3600STDY6184011_ACTTCGTA_L001_17592_1 lane1_3600STDY6184012_TAGTCGGT_L001_17592_1 
#>                                      "0223"                                      "0313" 
#> lane1_3600STDY6184013_CGCACGAG_L001_17592_1 lane1_3600STDY6184014_ACGTACTA_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6184015_AGCGCCAA_L001_17592_1 lane1_3600STDY6184016_GCCTGCCC_L001_17592_1 
#>                                      "0311"                                      "0231" 
#> lane1_3600STDY6184017_AGGACGAT_L001_17592_1 lane1_3600STDY6184018_CTTGACCG_L001_17592_1 
#>                                      "0311"                                      "0231" 
#> lane1_3600STDY6184019_AGGTCTAA_L001_17592_1 lane1_3600STDY6184020_CGAGATCC_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6184021_ATTAGCGG_L001_17592_1 lane1_3600STDY6184022_GCGCTGAT_L001_17592_1 
#>                                      "0311"                                      "0231" 
#> lane1_3600STDY6184023_TGCTGAAC_L001_17592_1 lane1_3600STDY6184024_GAGGGCAG_L001_17592_1 
#>                                      "0221"                                      "0313" 
#> lane1_3600STDY6184025_GTTTTCAC_L001_17592_1 lane1_3600STDY6184026_GAGATGCC_L001_17592_1 
#>                                      "0313"                                      "0311" 
#> lane1_3600STDY6184027_TTGAGAAG_L001_17592_1 lane1_3600STDY6184028_GCATCCGG_L001_17592_1 
#>                                      "0313"                                      "0311" 
#> lane1_3600STDY6184029_GTCACCAG_L001_17592_1 lane1_3600STDY6184030_GAGGTCGC_L001_17592_1 
#>                                      "0313"                                       "033" 
#> lane1_3600STDY6184031_AAGGGGTA_L001_17592_1 lane1_3600STDY6184032_TTTTACGT_L001_17592_1 
#>                                       "033"                                      "0311" 
#> lane1_3600STDY6184033_TTCCTACA_L001_17592_1 lane1_3600STDY6184034_AGTGTAGT_L001_17592_1 
#>                                      "0311"                                      "0231" 
#> lane1_3600STDY6184035_GTGGCCAA_L001_17592_1 lane1_3600STDY6184036_AAATACTC_L001_17592_1 
#>                                      "0311"                                      "0312" 
#> lane1_3600STDY6184037_CACCCGTC_L001_17592_1 lane1_3600STDY6184038_TCGTGGTT_L001_17592_1 
#>                                      "0311"                                       "033" 
#> lane1_3600STDY6184039_ACTTGGGG_L001_17592_1 lane1_3600STDY6184040_GGCTGCTT_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6184041_CAGGGTCG_L001_17592_1 lane1_3600STDY6184042_CTCGTCGA_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6184043_TCTACAGT_L001_17592_1 lane1_3600STDY6184044_CTTCTAGA_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6184045_AACGGCTT_L001_17592_1 lane1_3600STDY6184046_ATAAGACT_L001_17592_1 
#>                                      "0311"                                      "0231" 
#> lane1_3600STDY6184047_GTTTTTCG_L001_17592_1 lane1_3600STDY6184048_ATTGGTAT_L001_17592_1 
#>                                      "0231"                                      "0311" 
#> lane1_3600STDY6184049_CGCCAGTA_L001_17592_1 lane1_3600STDY6184050_AAGCCGAA_L001_17592_1 
#>                                      "0311"                                      "0311" 
#> lane1_3600STDY6184051_TGACCCAC_L001_17592_1 lane1_3600STDY6184052_ATTGCACA_L001_17592_1 
#>                                      "0231"                                      "0311" 
#> lane1_3600STDY6184053_CTTTTGAT_L001_17592_1 lane1_3600STDY6184054_TAGCGAGA_L001_17592_1 
#>                                      "0313"                                       "033" 
#> lane1_3600STDY6184055_TTCGCAGG_L001_17592_1 lane1_3600STDY6184056_TAGTTATT_L001_17592_1 
#>                                      "0311"                                       "033" 
#> lane1_3600STDY6184057_TCCTCCGA_L001_17592_1 lane1_3600STDY6184058_GCGGGTCT_L001_17592_1 
#>                                      "0313"                                      "0231" 
#> lane1_3600STDY6184059_GATTCTAT_L001_17592_1 lane1_3600STDY6184060_ATGCAAAG_L001_17592_1 
#>                                      "0311"                                      "0313" 
#> lane1_3600STDY6184061_GTCTGAGG_L001_17592_1 lane1_3600STDY6184062_TCTGGCGA_L001_17592_1 
#>                                      "0231"                                      "0232" 
#> lane1_3600STDY6184063_AATTTGCG_L001_17592_1 lane1_3600STDY6184064_TGGGTTGG_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6184065_AGTTGAAA_L001_17592_1 lane1_3600STDY6184066_GACCGGAA_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6184067_GATCGAAC_L001_17592_1 lane1_3600STDY6184068_GTATAGGG_L001_17592_1 
#>                                      "0222"                                      "0222" 
#> lane1_3600STDY6184069_GGTAAGAG_L001_17592_1 lane1_3600STDY6184070_AGTCCGAT_L001_17592_1 
#>                                      "0342"                                      "0232" 
#> lane1_3600STDY6184071_ATACAGGC_L001_17592_1 lane1_3600STDY6184072_TGAGACTC_L001_17592_1 
#>                                      "0232"                                       "033" 
#> lane1_3600STDY6184073_ACTCAGGA_L001_17592_1 lane1_3600STDY6184074_GTGTCTGA_L001_17592_1 
#>                                       "033"                                      "0313" 
#> lane1_3600STDY6184075_CTTGAATC_L001_17592_1 lane1_3600STDY6184076_CCGCATGA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184077_AAGTAACA_L001_17592_1 lane1_3600STDY6184078_GTGGTACT_L001_17592_1 
#>                                       "033"                                      "0232" 
#> lane1_3600STDY6184079_AGCTGTGC_L001_17592_1 lane1_3600STDY6184080_TTACCTTC_L001_17592_1 
#>                                      "0222"                                       "033" 
#> lane1_3600STDY6184081_TCCGGGTA_L001_17592_1 lane1_3600STDY6184082_CTACGTAA_L001_17592_1 
#>                                      "0231"                                      "0232" 
#> lane1_3600STDY6184083_TCGGACCG_L001_17592_1 lane1_3600STDY6184084_ATGCGTCG_L001_17592_1 
#>                                       "033"                                      "0313" 
#> lane1_3600STDY6184085_TTCTTAGC_L001_17592_1 lane1_3600STDY6184086_TGAGTAAG_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6184087_AAGTGATA_L001_17592_1 lane1_3600STDY6184088_TCGATGCG_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6184089_TATTCTGG_L001_17592_1 lane1_3600STDY6184090_AGCCGTGA_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6184091_AAGCCTTC_L001_17592_1 lane1_3600STDY6184092_AGGTATCC_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6184093_AGGATCTC_L001_17592_1 lane1_3600STDY6184094_CTGTTTGA_L001_17592_1 
#>                                       "033"                                      "0232" 
#> lane1_3600STDY6184095_GGAATTTC_L001_17592_1 lane1_3600STDY6184096_TTGGAGCA_L001_17592_1 
#>                                      "0231"                                      "0313" 
#> lane1_3600STDY6184097_AAGGTCTG_L001_17592_1 lane1_3600STDY6184098_AATTAGGC_L001_17592_1 
#>                                      "0311"                                       "033" 
#> lane1_3600STDY6184099_AATCGGGT_L001_17592_1 lane1_3600STDY6184100_AGGTAGAC_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184101_CTTATTCC_L001_17592_1 lane1_3600STDY6184102_CAGGCTCT_L001_17592_1 
#>                                       "033"                                      "0232" 
#> lane1_3600STDY6184103_AAAGCACG_L001_17592_1 lane1_3600STDY6184104_GTATACAC_L001_17592_1 
#>                                      "0232"                                      "0231" 
#> lane1_3600STDY6184105_GGACATAT_L001_17592_1 lane1_3600STDY6184106_CGGTTGGG_L001_17592_1 
#>                                      "0222"                                      "0231" 
#> lane1_3600STDY6184107_GTCCGTGA_L001_17592_1 lane1_3600STDY6184108_GCCGAACC_L001_17592_1 
#>                                       "033"                                      "0313" 
#> lane1_3600STDY6184109_ACTTTACT_L001_17592_1 lane1_3600STDY6184110_GGGTCCAT_L001_17592_1 
#>                                       "033"                                      "0311" 
#> lane1_3600STDY6184111_ATAACTAG_L001_17592_1 lane1_3600STDY6184112_AATAGAGA_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6184113_TCACCATT_L001_17592_1 lane1_3600STDY6184114_CGCCTGAT_L001_17592_1 
#>                                      "0231"                                      "0232" 
#> lane1_3600STDY6184115_GCGTGAAC_L001_17592_1 lane1_3600STDY6184116_TAAGGGTG_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6184117_GGTGTCGA_L001_17592_1 lane1_3600STDY6184118_CCGTTAGG_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184119_TGGCAAAA_L001_17592_1 lane1_3600STDY6184120_CCTACCCG_L001_17592_1 
#>                                      "0231"                                      "0313" 
#> lane1_3600STDY6184121_AACAGCGC_L001_17592_1 lane1_3600STDY6184122_TATACATC_L001_17592_1 
#>                                      "0311"                                      "0313" 
#> lane1_3600STDY6184123_AAGCGACT_L001_17592_1 lane1_3600STDY6184124_GAAGCGCA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184125_ACCTCTAC_L001_17592_1 lane1_3600STDY6184126_GATTGCGT_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6184127_GCTGGTTG_L001_17592_1 lane1_3600STDY6184128_ATCGTCCT_L001_17592_1 
#>                                       "033"                                      "0312" 
#> lane1_3600STDY6184129_GGACACGG_L001_17592_1 lane1_3600STDY6184130_CGCACCTA_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6184131_CTTCGGCT_L001_17592_1 lane1_3600STDY6184132_CGAATCGA_L001_17592_1 
#>                                      "0313"                                      "0222" 
#> lane1_3600STDY6184133_TAACAACT_L001_17592_1 lane1_3600STDY6184134_AGCTCTTT_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6184135_TAATCCCT_L001_17592_1 lane1_3600STDY6184136_AGGACACT_L001_17592_1 
#>                                      "0231"                                      "0232" 
#> lane1_3600STDY6184137_TTACACTA_L001_17592_1 lane1_3600STDY6184138_AAACATCA_L001_17592_1 
#>                                       "033"                                      "0232" 
#> lane1_3600STDY6184139_CCATAGCT_L001_17592_1 lane1_3600STDY6184140_GTTATGGC_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6184141_ATCCCCTA_L001_17592_1 lane1_3600STDY6184142_CATACTAC_L001_17592_1 
#>                                      "0232"                                       "033" 
#> lane1_3600STDY6184143_CAATTGTT_L001_17592_1 lane1_3600STDY6184144_AAACCCGT_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6184145_CAGATTTC_L001_17592_1 lane1_3600STDY6184146_GCGTAGGT_L001_17592_1 
#>                                      "0311"                                      "0311" 
#> lane1_3600STDY6184147_GGCATTCG_L001_17592_1 lane1_3600STDY6184148_TGGGGCTT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184149_CTGACTAC_L001_17592_1 lane1_3600STDY6184150_AACTTTTA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184151_AGGGATTC_L001_17592_1 lane1_3600STDY6184152_CCGAGTAG_L001_17592_1 
#>                                      "0231"                                       "033" 
#> lane1_3600STDY6184153_GGGGACTA_L001_17592_1 lane1_3600STDY6184154_GGAGTTGA_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6184155_AGCTCATC_L001_17592_1 lane1_3600STDY6184156_TAATCAAC_L001_17592_1 
#>                                      "0311"                                      "0221" 
#> lane1_3600STDY6184157_ACTGGTCG_L001_17592_1 lane1_3600STDY6184158_GACGATTG_L001_17592_1 
#>                                      "0313"                                      "0231" 
#> lane1_3600STDY6184159_AGCGATGA_L001_17592_1 lane1_3600STDY6184160_GAAGAGAT_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6184161_CGTATGCA_L001_17592_1 lane1_3600STDY6184162_CACGTGCG_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184163_GCTTAAAC_L001_17592_1 lane1_3600STDY6184164_GTTCCGCA_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6184165_GTATCGTC_L001_17592_1 lane1_3600STDY6184166_GTCCTCAC_L001_17592_1 
#>                                       "033"                                      "0311" 
#> lane1_3600STDY6184167_GTACGGAC_L001_17592_1 lane1_3600STDY6184168_CATTTTGC_L001_17592_1 
#>                                      "0231"                                      "0311" 
#> lane1_3600STDY6184169_TCCTCTCT_L001_17592_1 lane1_3600STDY6184170_AGCAACGA_L001_17592_1 
#>                                      "0341"                                      "0231" 
#> lane1_3600STDY6184171_ACAGAAGA_L001_17592_1 lane1_3600STDY6184172_CGACCCTT_L001_17592_1 
#>                                      "0311"                                       "033" 
#> lane1_3600STDY6184173_CTGCCTAG_L001_17592_1 lane1_3600STDY6184174_GAGCGCAT_L001_17592_1 
#>                                      "0311"                                       "033" 
#> lane1_3600STDY6184175_AACTTATC_L001_17592_1 lane1_3600STDY6184176_CCGATGTA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184177_TTACTACC_L001_17592_1 lane1_3600STDY6184178_CAAGGAGC_L001_17592_1 
#>                                      "0313"                                      "0311" 
#> lane1_3600STDY6184179_TGGTTGAC_L001_17592_1 lane1_3600STDY6184180_ACCTGCTG_L001_17592_1 
#>                                      "0313"                                      "0221"

show/hide code output

get_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 1435))
#> lane1_3600STDY6077864_ATCACGTT_L001_15986_1 lane1_3600STDY6077865_CGATGTTT_L001_15986_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6077866_TTAGGCAT_L001_15986_1 lane1_3600STDY6077867_TGACCACT_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077868_ACAGTGGT_L001_15986_1 lane1_3600STDY6077869_GCCAATGT_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077870_CAGATCTG_L001_15986_1 lane1_3600STDY6077871_ACTTGATG_L001_15986_1 
#>                                     "01212"                                     "01211" 
#> lane1_3600STDY6077872_GATCAGCG_L001_15986_1 lane1_3600STDY6077873_TAGCTTGT_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077874_GGCTACAG_L001_15986_1 lane1_3600STDY6077875_CTTGTACT_L001_15986_1 
#>                                     "01211"                                     "01212" 
#> lane1_3600STDY6077876_TGGTTGTT_L001_15986_1 lane1_3600STDY6077877_TCTCGGTT_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077878_TAAGCGTT_L001_15986_1 lane1_3600STDY6077879_TCCGTCTT_L001_15986_1 
#>                                     "01211"                                     "01212" 
#> lane1_3600STDY6077880_TGTACCTT_L001_15986_1 lane1_3600STDY6077881_TTCTGTGT_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077882_TCTGCTGT_L001_15986_1 lane1_3600STDY6077883_TTGGAGGT_L001_15986_1 
#>                                     "01211"                                      "0221" 
#> lane1_3600STDY6077884_TCGAGCGT_L001_15986_1 lane1_3600STDY6077885_TGATACGT_L001_15986_1 
#>                                     "01212"                                     "01212" 
#> lane1_3600STDY6077886_TGCATAGT_L001_15986_1 lane1_3600STDY6077887_TTGACTCT_L001_15986_1 
#>                                     "01212"                                     "01212" 
#> lane1_3600STDY6077888_TGCGATCT_L001_15986_1 lane1_3600STDY6077889_TTCCTGCT_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077890_TAGTGACT_L001_15986_1 lane1_3600STDY6077891_TACAGGAT_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077892_TCCTCAAT_L001_15986_1 lane1_3600STDY6077893_TGTGGTTG_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077894_TAGTCTTG_L001_15986_1 lane1_3600STDY6077895_TTCCATTG_L001_15986_1 
#>                                     "01211"                                     "01212" 
#> lane1_3600STDY6077896_TCGAAGTG_L001_15986_1 lane1_3600STDY6077897_TAACGCTG_L001_15986_1 
#>                                     "01212"                                     "01212" 
#> lane1_3600STDY6077898_TTGGTATG_L001_15986_1 lane1_3600STDY6077899_TGAACTGG_L001_15986_1 
#>                                     "01211"                                      "0221" 
#> lane1_3600STDY6077900_TACTTCGG_L001_15986_1 lane1_3600STDY6077901_TCTCACGG_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077902_TCAGGAGG_L001_15986_1 lane1_3600STDY6077903_TAAGTTCG_L001_15986_1 
#>                                     "01212"                                     "01211" 
#> lane1_3600STDY6077904_TCCAGTCG_L001_15986_1 lane1_3600STDY6077905_TGTATGCG_L001_15986_1 
#>                                      "0221"                                     "01211" 
#> lane1_3600STDY6077906_TCATTGAG_L001_15986_1 lane1_3600STDY6077907_TGGCTCAG_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077908_TATGCCAG_L001_15986_1 lane1_3600STDY6077909_TCAGATTC_L001_15986_1 
#>                                     "01212"                                     "01212" 
#> lane1_3600STDY6077910_TACTAGTC_L001_15986_1 lane1_3600STDY6077911_TTCAGCTC_L001_15986_1 
#>                                     "01211"                                      "0221" 
#> lane1_3600STDY6077912_TGTCTATC_L001_15986_1 lane1_3600STDY6077913_TATGTGGC_L001_15986_1 
#>                                     "01212"                                     "01211" 
#> lane1_3600STDY6077914_TTACTCGC_L001_15986_1 lane1_3600STDY6077915_TCGTTAGC_L001_15986_1 
#>                                      "0221"                                     "01212" 
#> lane1_3600STDY6077916_TACCGAGC_L001_15986_1 lane1_3600STDY6077917_TGTTCTCC_L001_15986_1 
#>                                     "01212"                                     "01212" 
#> lane1_3600STDY6077918_TTCGCACC_L001_15986_1 lane1_3600STDY6077919_TTGCGTAC_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077920_TCTACGAC_L001_15986_1 lane1_3600STDY6077921_TGACAGAC_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077922_TAGAACAC_L001_15986_1 lane1_3600STDY6077923_TCATCCTA_L001_15986_1 
#>                                     "01211"                                     "01212" 
#> lane1_3600STDY6077924_TGCTGATA_L001_15986_1 lane1_3600STDY6077925_TAGACGGA_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077926_TGTGAAGA_L001_15986_1 lane1_3600STDY6077927_TCTCTTCA_L001_15986_1 
#>                                     "01211"                                     "01212" 
#> lane1_3600STDY6077928_TTGTTCCA_L001_15986_1 lane1_3600STDY6077929_TGAAGCCA_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077930_TACCACCA_L001_15986_1 lane1_3600STDY6077931_TGCGTGAA_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077932_GGTGAGTT_L001_15986_1 lane1_3600STDY6077933_GATCTCTT_L001_15986_1 
#>                                     "01211"                                      "0221" 
#> lane1_3600STDY6077934_GTGTCCTT_L001_15986_1 lane1_3600STDY6077935_GACGGATT_L001_15986_1 
#>                                      "0221"                                     "01211" 
#> lane1_3600STDY6077936_GCAACATT_L001_15986_1 lane1_3600STDY6077937_GGTCGTGT_L001_15986_1 
#>                                     "01212"                                     "01212" 
#> lane1_3600STDY6077938_GAATCTGT_L001_15986_1 lane1_3600STDY6077939_GTACATCT_L001_15986_1 
#>                                     "01212"                                     "01211" 
#> lane1_3600STDY6077940_GAGGTGCT_L001_15986_1 lane1_3600STDY6077941_GCATGGCT_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077942_GTTAGCCT_L001_15986_1 lane1_3600STDY6077943_GTCGCTAT_L001_15986_1 
#>                                     "01211"                                     "01212" 
#> lane1_3600STDY6077944_GGAATGAT_L001_15986_1 lane1_3600STDY6077945_GAGCCAAT_L001_15986_1 
#>                                     "01211"                                     "01212" 
#> lane1_3600STDY6077946_GCTCCTTG_L001_15986_1 lane1_3600STDY6077947_GTAAGGTG_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077948_GAGGATGG_L001_15986_1 lane1_3600STDY6077949_GTTGTCGG_L001_15986_1 
#>                                     "01212"                                     "01211" 
#> lane1_3600STDY6077950_GGATTAGG_L001_15986_1 lane1_3600STDY6077951_GATAGAGG_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077952_GTGTGTCG_L001_15986_1 lane1_3600STDY6077953_GCAATCCG_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077954_GACCTTAG_L001_15986_1 lane1_3600STDY6077955_GCCTGTTC_L001_15986_1 
#>                                     "01211"                                     "01211" 
#> lane1_3600STDY6077956_GCACTGTC_L001_15986_1 lane1_3600STDY6077957_GCTAACTC_L001_15986_1 
#>                                     "01211"                                     "01212" 
#> lane1_3600STDY6077958_GATTCATC_L001_15986_1 lane1_3600STDY6077959_GTCTTGGC_L001_15986_1 
#>                                     "01212"                                     "01212" 
#> lane3_3600STDY6077960_ATCACGTT_L003_15987_1 lane3_3600STDY6077961_CGATGTTT_L003_15987_1 
#>                                      "0221"                                      "0221" 
#> lane3_3600STDY6077962_TTAGGCAT_L003_15987_1 lane3_3600STDY6077963_TGACCACT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077964_ACAGTGGT_L003_15987_1 lane3_3600STDY6077965_GCCAATGT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077966_CAGATCTG_L003_15987_1 lane3_3600STDY6077967_ACTTGATG_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077968_GATCAGCG_L003_15987_1 lane3_3600STDY6077969_TAGCTTGT_L003_15987_1 
#>                                      "0122"                                     "01233" 
#> lane3_3600STDY6077970_GGCTACAG_L003_15987_1 lane3_3600STDY6077971_CTTGTACT_L003_15987_1 
#>                                     "01232"                                     "01232" 
#> lane3_3600STDY6077972_TGGTTGTT_L003_15987_1 lane3_3600STDY6077973_TCTCGGTT_L003_15987_1 
#>                                     "01233"                                      "0122" 
#> lane3_3600STDY6077974_TAAGCGTT_L003_15987_1 lane3_3600STDY6077975_TCCGTCTT_L003_15987_1 
#>                                     "01231"                                     "01231" 
#> lane3_3600STDY6077976_TGTACCTT_L003_15987_1 lane3_3600STDY6077977_TTCTGTGT_L003_15987_1 
#>                                     "01232"                                      "0122" 
#> lane3_3600STDY6077978_TCTGCTGT_L003_15987_1 lane3_3600STDY6077979_TTGGAGGT_L003_15987_1 
#>                                      "0224"                                      "0122" 
#> lane3_3600STDY6077980_TCGAGCGT_L003_15987_1 lane3_3600STDY6077981_TGATACGT_L003_15987_1 
#>                                      "0122"                                     "01233" 
#> lane3_3600STDY6077982_TGCATAGT_L003_15987_1 lane3_3600STDY6077983_TTGACTCT_L003_15987_1 
#>                                      "0122"                                     "01233" 
#> lane3_3600STDY6077984_TGCGATCT_L003_15987_1 lane3_3600STDY6077985_TTCCTGCT_L003_15987_1 
#>                                     "01233"                                      "0122" 
#> lane3_3600STDY6077986_TAGTGACT_L003_15987_1 lane3_3600STDY6077987_TACAGGAT_L003_15987_1 
#>                                     "01233"                                     "01231" 
#> lane3_3600STDY6077988_TCCTCAAT_L003_15987_1 lane3_3600STDY6077989_TGTGGTTG_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077990_TAGTCTTG_L003_15987_1 lane3_3600STDY6077991_TTCCATTG_L003_15987_1 
#>                                      "0122"                                     "01233" 
#> lane3_3600STDY6077992_TCGAAGTG_L003_15987_1 lane3_3600STDY6077993_TAACGCTG_L003_15987_1 
#>                                      "0122"                                     "01231" 
#> lane3_3600STDY6077994_TTGGTATG_L003_15987_1 lane3_3600STDY6077995_TGAACTGG_L003_15987_1 
#>                                     "01231"                                     "01231" 
#> lane3_3600STDY6077996_TACTTCGG_L003_15987_1 lane3_3600STDY6077997_TCTCACGG_L003_15987_1 
#>                                      "0122"                                      "0224" 
#> lane3_3600STDY6077998_TCAGGAGG_L003_15987_1 lane3_3600STDY6077999_TAAGTTCG_L003_15987_1 
#>                                     "01231"                                     "01231" 
#> lane3_3600STDY6078000_TCCAGTCG_L003_15987_1 lane3_3600STDY6078001_TGTATGCG_L003_15987_1 
#>                                      "0122"                                      "0221" 
#> lane3_3600STDY6078002_TCATTGAG_L003_15987_1 lane3_3600STDY6078003_TGGCTCAG_L003_15987_1 
#>                                      "0342"                                      "0122" 
#> lane3_3600STDY6078004_TATGCCAG_L003_15987_1 lane3_3600STDY6078005_TCAGATTC_L003_15987_1 
#>                                      "0122"                                     "01231" 
#> lane3_3600STDY6078006_TACTAGTC_L003_15987_1 lane3_3600STDY6078007_TTCAGCTC_L003_15987_1 
#>                                     "01231"                                      "0122" 
#> lane3_3600STDY6078008_TGTCTATC_L003_15987_1 lane3_3600STDY6078009_TATGTGGC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078010_TTACTCGC_L003_15987_1 lane3_3600STDY6078011_TCGTTAGC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078012_TACCGAGC_L003_15987_1 lane3_3600STDY6078013_TGTTCTCC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078014_TTCGCACC_L003_15987_1 lane3_3600STDY6078015_TTGCGTAC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078016_TCTACGAC_L003_15987_1 lane3_3600STDY6078017_TGACAGAC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078018_TAGAACAC_L003_15987_1 lane3_3600STDY6078019_TCATCCTA_L003_15987_1 
#>                                     "01233"                                     "01233" 
#> lane3_3600STDY6078020_TGCTGATA_L003_15987_1 lane3_3600STDY6078021_TAGACGGA_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078022_TGTGAAGA_L003_15987_1 lane3_3600STDY6078023_TCTCTTCA_L003_15987_1 
#>                                     "01231"                                     "01233" 
#> lane3_3600STDY6078024_TTGTTCCA_L003_15987_1 lane3_3600STDY6078025_TGAAGCCA_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078026_TACCACCA_L003_15987_1 lane3_3600STDY6078027_TGCGTGAA_L003_15987_1 
#>                                     "01233"                                      "0221" 
#> lane3_3600STDY6078028_GGTGAGTT_L003_15987_1 lane3_3600STDY6078029_GATCTCTT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078030_GTGTCCTT_L003_15987_1 lane3_3600STDY6078031_GACGGATT_L003_15987_1 
#>                                     "01231"                                     "01232" 
#> lane3_3600STDY6078032_GCAACATT_L003_15987_1 lane3_3600STDY6078033_GGTCGTGT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078034_GAATCTGT_L003_15987_1 lane3_3600STDY6078035_GTACATCT_L003_15987_1 
#>                                      "0122"                                     "01233" 
#> lane3_3600STDY6078036_GAGGTGCT_L003_15987_1 lane3_3600STDY6078037_GCATGGCT_L003_15987_1 
#>                                     "01231"                                      "0122" 
#> lane3_3600STDY6078038_GTTAGCCT_L003_15987_1 lane3_3600STDY6078039_GTCGCTAT_L003_15987_1 
#>                                     "01233"                                     "01233" 
#> lane3_3600STDY6078040_GGAATGAT_L003_15987_1 lane3_3600STDY6078041_GAGCCAAT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078042_GCTCCTTG_L003_15987_1 lane3_3600STDY6078043_GTAAGGTG_L003_15987_1 
#>                                     "01231"                                     "01232" 
#> lane3_3600STDY6078044_GAGGATGG_L003_15987_1 lane3_3600STDY6078045_GTTGTCGG_L003_15987_1 
#>                                     "01232"                                     "01232" 
#> lane3_3600STDY6078046_GGATTAGG_L003_15987_1 lane3_3600STDY6078047_GATAGAGG_L003_15987_1 
#>                                     "01232"                                     "01232" 
#> lane3_3600STDY6078048_GTGTGTCG_L003_15987_1 lane3_3600STDY6078049_GCAATCCG_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078050_GACCTTAG_L003_15987_1 lane3_3600STDY6078051_GCCTGTTC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078052_GCACTGTC_L003_15987_1 lane3_3600STDY6078053_GCTAACTC_L003_15987_1 
#>                                      "0122"                                     "01232" 
#> lane3_3600STDY6078054_GATTCATC_L003_15987_1 lane3_3600STDY6078055_GTCTTGGC_L003_15987_1 
#>                                     "01232"                                     "01232" 
#> lane1_3600STDY6167693_ATCACGTT_L001_17236_1 lane1_3600STDY6167694_CGATGTTT_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167695_TTAGGCAT_L001_17236_1 lane1_3600STDY6167696_TGACCACT_L001_17236_1 
#>                                      "0342"                                      "0112" 
#> lane1_3600STDY6167697_ACAGTGGT_L001_17236_1 lane1_3600STDY6167698_GCCAATGT_L001_17236_1 
#>                                      "0224"                                      "0113" 
#> lane1_3600STDY6167699_CAGATCTG_L001_17236_1 lane1_3600STDY6167700_ACTTGATG_L001_17236_1 
#>                                      "0113"                                      "0221" 
#> lane1_3600STDY6167701_GATCAGCG_L001_17236_1 lane1_3600STDY6167702_TAGCTTGT_L001_17236_1 
#>                                      "0113"                                       "014" 
#> lane1_3600STDY6167703_GGCTACAG_L001_17236_1 lane1_3600STDY6167704_CTTGTACT_L001_17236_1 
#>                                       "014"                                      "0342" 
#> lane1_3600STDY6167705_TGGTTGTT_L001_17236_1 lane1_3600STDY6167706_TCTCGGTT_L001_17236_1 
#>                                       "014"                                      "0221" 
#> lane1_3600STDY6167707_TAAGCGTT_L001_17236_1 lane1_3600STDY6167708_TCCGTCTT_L001_17236_1 
#>                                      "0221"                                       "013" 
#> lane1_3600STDY6167709_TGTACCTT_L001_17236_1 lane1_3600STDY6167710_TTCTGTGT_L001_17236_1 
#>                                      "0113"                                      "0221" 
#> lane1_3600STDY6167711_TCTGCTGT_L001_17236_1 lane1_3600STDY6167712_TTGGAGGT_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167713_TCGAGCGT_L001_17236_1 lane1_3600STDY6167714_TGATACGT_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167715_TGCATAGT_L001_17236_1 lane1_3600STDY6167716_TTGACTCT_L001_17236_1 
#>                                      "0113"                                       "013" 
#> lane1_3600STDY6167717_TGCGATCT_L001_17236_1 lane1_3600STDY6167718_TTCCTGCT_L001_17236_1 
#>                                       "013"                                      "0221" 
#> lane1_3600STDY6167719_TAGTGACT_L001_17236_1 lane1_3600STDY6167720_TACAGGAT_L001_17236_1 
#>                                      "0342"                                      "0342" 
#> lane1_3600STDY6167721_TCCTCAAT_L001_17236_1 lane1_3600STDY6167722_TGTGGTTG_L001_17236_1 
#>                                      "0342"                                      "0113" 
#> lane1_3600STDY6167723_TAGTCTTG_L001_17236_1 lane1_3600STDY6167724_TTCCATTG_L001_17236_1 
#>                                      "0113"                                      "0221" 
#> lane1_3600STDY6167725_TCGAAGTG_L001_17236_1 lane1_3600STDY6167726_TAACGCTG_L001_17236_1 
#>                                      "0113"                                       "014" 
#> lane1_3600STDY6167727_TTGGTATG_L001_17236_1 lane1_3600STDY6167728_TGAACTGG_L001_17236_1 
#>                                       "013"                                     "01212" 
#> lane1_3600STDY6167729_TACTTCGG_L001_17236_1 lane1_3600STDY6167730_TCTCACGG_L001_17236_1 
#>                                      "0111"                                       "014" 
#> lane1_3600STDY6167731_TCAGGAGG_L001_17236_1 lane1_3600STDY6167732_TAAGTTCG_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6167733_TCCAGTCG_L001_17236_1 lane1_3600STDY6167734_TGTATGCG_L001_17236_1 
#>                                      "0113"                                      "0221" 
#> lane1_3600STDY6167735_TCATTGAG_L001_17236_1 lane1_3600STDY6167736_TGGCTCAG_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167737_TATGCCAG_L001_17236_1 lane1_3600STDY6167738_TCAGATTC_L001_17236_1 
#>                                      "0113"                                       "013" 
#> lane1_3600STDY6167739_TACTAGTC_L001_17236_1 lane1_3600STDY6167740_TTCAGCTC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167741_TGTCTATC_L001_17236_1 lane1_3600STDY6167742_TATGTGGC_L001_17236_1 
#>                                      "0113"                                       "013" 
#> lane1_3600STDY6167743_TTACTCGC_L001_17236_1 lane1_3600STDY6167744_TCGTTAGC_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167745_TACCGAGC_L001_17236_1 lane1_3600STDY6167746_TGTTCTCC_L001_17236_1 
#>                                      "0342"                                      "0111" 
#> lane1_3600STDY6167747_TTCGCACC_L001_17236_1 lane1_3600STDY6167748_TTGCGTAC_L001_17236_1 
#>                                      "0342"                                      "0111" 
#> lane1_3600STDY6167749_TCTACGAC_L001_17236_1 lane1_3600STDY6167750_TGACAGAC_L001_17236_1 
#>                                      "0111"                                      "0113" 
#> lane1_3600STDY6167751_TAGAACAC_L001_17236_1 lane1_3600STDY6167752_TCATCCTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167753_TGCTGATA_L001_17236_1 lane1_3600STDY6167754_TAGACGGA_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167755_TGTGAAGA_L001_17236_1 lane1_3600STDY6167756_TCTCTTCA_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6167757_TTGTTCCA_L001_17236_1 lane1_3600STDY6167758_TGAAGCCA_L001_17236_1 
#>                                      "0111"                                      "0221" 
#> lane1_3600STDY6167759_TACCACCA_L001_17236_1 lane1_3600STDY6167760_TGCGTGAA_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6167761_GGTGAGTT_L001_17236_1 lane1_3600STDY6167762_GATCTCTT_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167763_GTGTCCTT_L001_17236_1 lane1_3600STDY6167764_GACGGATT_L001_17236_1 
#>                                      "0112"                                       "013" 
#> lane1_3600STDY6167765_GCAACATT_L001_17236_1 lane1_3600STDY6167766_GGTCGTGT_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6167767_GAATCTGT_L001_17236_1 lane1_3600STDY6167768_GTACATCT_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167769_GAGGTGCT_L001_17236_1 lane1_3600STDY6167770_GCATGGCT_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167771_GTTAGCCT_L001_17236_1 lane1_3600STDY6167772_GTCGCTAT_L001_17236_1 
#>                                      "0112"                                      "0111" 
#> lane1_3600STDY6167773_GGAATGAT_L001_17236_1 lane1_3600STDY6167774_GAGCCAAT_L001_17236_1 
#>                                      "0112"                                      "0113" 
#> lane1_3600STDY6167775_GCTCCTTG_L001_17236_1 lane1_3600STDY6167776_GTAAGGTG_L001_17236_1 
#>                                      "0111"                                      "0221" 
#> lane1_3600STDY6167777_GAGGATGG_L001_17236_1 lane1_3600STDY6167778_GTTGTCGG_L001_17236_1 
#>                                      "0112"                                      "0221" 
#> lane1_3600STDY6167779_GGATTAGG_L001_17236_1 lane1_3600STDY6167780_GATAGAGG_L001_17236_1 
#>                                      "0113"                                      "0112" 
#> lane1_3600STDY6167781_GTGTGTCG_L001_17236_1 lane1_3600STDY6167782_GCAATCCG_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167783_GACCTTAG_L001_17236_1 lane1_3600STDY6167784_GCCTGTTC_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167785_GCACTGTC_L001_17236_1 lane1_3600STDY6167786_GCTAACTC_L001_17236_1 
#>                                      "0112"                                      "0111" 
#> lane1_3600STDY6167787_GATTCATC_L001_17236_1 lane1_3600STDY6167788_GTCTTGGC_L001_17236_1 
#>                                      "0112"                                      "0221" 
#> lane1_3600STDY6167789_GTAGAAGC_L001_17236_1 lane1_3600STDY6167790_GATGGTCC_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6167791_GTGCTACC_L001_17236_1 lane1_3600STDY6167792_GCGATTAC_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167793_GGTTGGAC_L001_17236_1 lane1_3600STDY6167794_GGCACAAC_L001_17236_1 
#>                                      "0112"                                      "0111" 
#> lane1_3600STDY6167795_GACACTTA_L001_17236_1 lane1_3600STDY6167796_GTGCAGTA_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167797_GGAGTCTA_L001_17236_1 lane1_3600STDY6167798_GCTATGGA_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6167799_GAGTGCGA_L001_17236_1 lane1_3600STDY6167800_GTAACCGA_L001_17236_1 
#>                                      "0342"                                      "0111" 
#> lane1_3600STDY6167801_GGCAAGCA_L001_17236_1 lane1_3600STDY6167802_GCCTTACA_L001_17236_1 
#>                                      "0112"                                       "013" 
#> lane1_3600STDY6167803_GAACGACA_L001_17236_1 lane1_3600STDY6167804_GCAGGTAA_L001_17236_1 
#>                                       "013"                                      "0111" 
#> lane1_3600STDY6167805_GCGTCGAA_L001_17236_1 lane1_3600STDY6167806_CGTTCGGT_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6167807_CACCAGGT_L001_17236_1 lane1_3600STDY6167808_CTGCGAGT_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6167809_CCGTATCT_L001_17236_1 lane1_3600STDY6167810_CGCTTCCT_L001_17236_1 
#>                                      "0111"                                      "0222" 
#> lane1_3600STDY6167811_CAAGACCT_L001_17236_1 lane1_3600STDY6167812_CACACACT_L001_17236_1 
#>                                      "0111"                                       "014" 
#> lane1_3600STDY6167813_CCTAGTAT_L001_17236_1 lane1_3600STDY6167814_CCACCGAT_L001_17236_1 
#>                                      "0221"                                      "0112" 
#> lane1_3600STDY6167815_CTTCACAT_L001_17236_1 lane1_3600STDY6167816_CTATCATG_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167817_CATGAATG_L001_17236_1 lane1_3600STDY6167818_CCACTTGG_L001_17236_1 
#>                                      "0342"                                      "0111" 
#> lane1_3600STDY6167819_CTGTACGG_L001_17236_1 lane1_3600STDY6167820_CTAGATAG_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167821_CACTCGAG_L001_17236_1 lane1_3600STDY6167822_CCGACAAG_L001_17236_1 
#>                                      "0342"                                       "013" 
#> lane1_3600STDY6167823_CTTGCTTC_L001_17236_1 lane1_3600STDY6167824_CATAGGTC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167825_CACATTGC_L001_17236_1 lane1_3600STDY6167826_CGCTAAGC_L001_17236_1 
#>                                      "0111"                                       "014" 
#> lane1_3600STDY6167827_CAACCTCC_L001_17236_1 lane1_3600STDY6167828_CAGCTGAC_L001_17236_1 
#>                                       "013"                                      "0111" 
#> lane1_3600STDY6167829_CTCAAGAC_L001_17236_1 lane1_3600STDY6167830_CGTGTCAC_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167831_CCATGCAC_L001_17236_1 lane1_3600STDY6167832_CGTTACTA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167833_CAAGTAGA_L001_17236_1 lane1_3600STDY6167834_CTCTCTCA_L001_17236_1 
#>                                      "0111"                                      "0113" 
#> lane1_3600STDY6167835_CGACTGCA_L001_17236_1 lane1_3600STDY6167836_CCTGAGCA_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6167837_CAGGCTAA_L001_17236_1 lane1_3600STDY6167838_CGGAGGAA_L001_17236_1 
#>                                       "014"                                      "0113" 
#> lane1_3600STDY6167839_AGGAGATT_L001_17236_1 lane1_3600STDY6167840_AGGCAGCT_L001_17236_1 
#>                                       "013"                                      "0111" 
#> lane1_3600STDY6167841_ACGTTCAT_L001_17236_1 lane1_3600STDY6167842_AACGTGTG_L001_17236_1 
#>                                      "0342"                                       "013" 
#> lane1_3600STDY6167843_AGACCGTG_L001_17236_1 lane1_3600STDY6167844_ACCTCTGG_L001_17236_1 
#>                                      "0342"                                      "0221" 
#> lane1_3600STDY6167845_ATCCTAGG_L001_17236_1 lane1_3600STDY6167846_ATCAACCG_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167847_AGGTCACG_L001_17236_1 lane1_3600STDY6167848_ACTGTTAG_L001_17236_1 
#>                                      "0221"                                       "013" 
#> lane1_3600STDY6167849_AAGAGTAG_L001_17236_1 lane1_3600STDY6167850_ATTCGGAG_L001_17236_1 
#>                                       "013"                                       "014" 
#> lane1_3600STDY6167851_ACGCAATC_L001_17236_1 lane1_3600STDY6167852_ACAAGTGC_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167853_ATGGATCC_L001_17236_1 lane1_3600STDY6167854_AGAGGACC_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167855_ATCTCCAC_L001_17236_1 lane1_3600STDY6167856_ATTGGCTA_L001_17236_1 
#>                                      "0111"                                      "0113" 
#> lane1_3600STDY6167857_AATCCTGA_L001_17236_1 lane1_3600STDY6167858_AGGATTCA_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6167859_AACTGGCA_L001_17236_1 lane1_3600STDY6167860_ACAACGCA_L001_17236_1 
#>                                       "013"                                      "0112" 
#> lane1_3600STDY6167861_CGGAAACA_L001_17236_1 lane1_3600STDY6167862_AATGAATT_L001_17236_1 
#>                                      "0221"                                       "014" 
#> lane1_3600STDY6167863_TAGGACCC_L001_17236_1 lane1_3600STDY6167864_TCTCAGTG_L001_17236_1 
#>                                      "0113"                                      "0111" 
#> lane1_3600STDY6167865_CATGGGAA_L001_17236_1 lane1_3600STDY6167866_CCTAAGAT_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167867_CTCAGATA_L001_17236_1 lane1_3600STDY6167868_CCCATAGG_L001_17236_1 
#>                                      "0111"                                       "014" 
#> lane1_3600STDY6167869_GCTATGAC_L001_17236_1 lane1_3600STDY6167870_GCTGTGAA_L001_17236_1 
#>                                      "0111"                                      "0221" 
#> lane1_3600STDY6167871_ACCTTCAA_L001_17236_1 lane1_3600STDY6167872_ACAAAGCC_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6167873_CAAAACCG_L001_17236_1 lane1_3600STDY6167874_GCTGGACA_L001_17236_1 
#>                                      "0221"                                       "014" 
#> lane1_3600STDY6167875_AAGTCGTA_L001_17236_1 lane1_3600STDY6167876_CATCCGTA_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6167877_TTGTGTCT_L001_17236_1 lane1_3600STDY6167878_TGCTCTAG_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6167879_ACCCAACA_L001_17236_1 lane1_3600STDY6167880_CGATCTGA_L001_17236_1 
#>                                      "0221"                                      "0112" 
#> lane1_3600STDY6167881_GTTCCACG_L001_17236_1 lane1_3600STDY6167882_ACTCTTTC_L001_17236_1 
#>                                      "0111"                                       "013" 
#> lane1_3600STDY6167883_TATTGGAG_L001_17236_1 lane1_3600STDY6167884_TAAACATA_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6167885_GTAAGATA_L001_17236_1 lane1_3600STDY6167886_TACCGCAA_L001_17236_1 
#>                                      "0342"                                       "013" 
#> lane1_3600STDY6167887_TATCTCCT_L001_17236_1 lane1_3600STDY6167888_TGTCATCT_L001_17236_1 
#>                                      "0342"                                      "0111" 
#> lane1_3600STDY6167889_ATAGCTCT_L001_17236_1 lane1_3600STDY6167890_AGTCCAAC_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167891_TTTGGGCA_L001_17236_1 lane1_3600STDY6167892_TCTGACGC_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167893_TGTCGACT_L001_17236_1 lane1_3600STDY6167894_GTCACGTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167895_TTGAGCGA_L001_17236_1 lane1_3600STDY6167896_GAGACATA_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167897_GTCAAGCT_L001_17236_1 lane1_3600STDY6167898_AGCAAGTT_L001_17236_1 
#>                                      "0232"                                      "0342" 
#> lane1_3600STDY6167899_GACGCTCA_L001_17236_1 lane1_3600STDY6167900_ACGGCAGC_L001_17236_1 
#>                                      "0112"                                      "0342" 
#> lane1_3600STDY6167901_AGAACTGA_L001_17236_1 lane1_3600STDY6167902_CGCCTTTG_L001_17236_1 
#>                                      "0342"                                      "0112" 
#> lane1_3600STDY6167903_TAAGGTCA_L001_17236_1 lane1_3600STDY6167904_ACGTTGGC_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167905_CCAGCTTA_L001_17236_1 lane1_3600STDY6167906_GAATCCTA_L001_17236_1 
#>                                      "0113"                                      "0111" 
#> lane1_3600STDY6167907_ACTTCGTA_L001_17236_1 lane1_3600STDY6167908_TAGTCGGT_L001_17236_1 
#>                                       "013"                                      "0221" 
#> lane1_3600STDY6167909_CGCACGAG_L001_17236_1 lane1_3600STDY6167910_ACGTACTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167911_AGCGCCAA_L001_17236_1 lane1_3600STDY6167912_GCCTGCCC_L001_17236_1 
#>                                      "0113"                                      "0113" 
#> lane1_3600STDY6167913_AGGACGAT_L001_17236_1 lane1_3600STDY6167914_CTTGACCG_L001_17236_1 
#>                                      "0111"                                      "0113" 
#> lane1_3600STDY6167915_AGGTCTAA_L001_17236_1 lane1_3600STDY6167916_CGAGATCC_L001_17236_1 
#>                                       "013"                                      "0111" 
#> lane1_3600STDY6167917_ATTAGCGG_L001_17236_1 lane1_3600STDY6167918_GCGCTGAT_L001_17236_1 
#>                                      "0111"                                      "0221" 
#> lane1_3600STDY6167919_TGCTGAAC_L001_17236_1 lane1_3600STDY6167920_GAGGGCAG_L001_17236_1 
#>                                       "014"                                      "0221" 
#> lane1_3600STDY6167921_GTTTTCAC_L001_17236_1 lane1_3600STDY6167922_GAGATGCC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167923_TTGAGAAG_L001_17236_1 lane1_3600STDY6167924_GCATCCGG_L001_17236_1 
#>                                       "013"                                      "0112" 
#> lane1_3600STDY6167925_GTCACCAG_L001_17236_1 lane1_3600STDY6167926_GAGGTCGC_L001_17236_1 
#>                                      "0112"                                      "0342" 
#> lane1_3600STDY6167927_AAGGGGTA_L001_17236_1 lane1_3600STDY6167928_TTTTACGT_L001_17236_1 
#>                                      "0113"                                      "0112" 
#> lane1_3600STDY6167929_TTCCTACA_L001_17236_1 lane1_3600STDY6167930_AGTGTAGT_L001_17236_1 
#>                                      "0111"                                       "013" 
#> lane1_3600STDY6167931_GTGGCCAA_L001_17236_1 lane1_3600STDY6167932_AAATACTC_L001_17236_1 
#>                                       "013"                                       "014" 
#> lane1_3600STDY6167933_CACCCGTC_L001_17236_1 lane1_3600STDY6167934_TCGTGGTT_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6167935_ACTTGGGG_L001_17236_1 lane1_3600STDY6167936_GGCTGCTT_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6167937_CAGGGTCG_L001_17236_1 lane1_3600STDY6167938_CTCGTCGA_L001_17236_1 
#>                                      "0112"                                      "0111" 
#> lane1_3600STDY6167939_TCTACAGT_L001_17236_1 lane1_3600STDY6167940_CTTCTAGA_L001_17236_1 
#>                                      "0112"                                      "0342" 
#> lane1_3600STDY6167941_AACGGCTT_L001_17236_1 lane1_3600STDY6167942_ATAAGACT_L001_17236_1 
#>                                      "0111"                                       "013" 
#> lane1_3600STDY6167943_GTTTTTCG_L001_17236_1 lane1_3600STDY6167944_ATTGGTAT_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167945_CGCCAGTA_L001_17236_1 lane1_3600STDY6167946_AAGCCGAA_L001_17236_1 
#>                                      "0113"                                      "0113" 
#> lane1_3600STDY6167947_TGACCCAC_L001_17236_1 lane1_3600STDY6167948_ATTGCACA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167949_CTTTTGAT_L001_17236_1 lane1_3600STDY6167950_TAGCGAGA_L001_17236_1 
#>                                      "0112"                                      "0221" 
#> lane1_3600STDY6167951_TTCGCAGG_L001_17236_1 lane1_3600STDY6167952_TAGTTATT_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167953_TCCTCCGA_L001_17236_1 lane1_3600STDY6167954_GCGGGTCT_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167955_GATTCTAT_L001_17236_1 lane1_3600STDY6167956_ATGCAAAG_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167957_GTCTGAGG_L001_17236_1 lane1_3600STDY6167958_TCTGGCGA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167959_AATTTGCG_L001_17236_1 lane1_3600STDY6167960_TGGGTTGG_L001_17236_1 
#>                                      "0111"                                      "0342" 
#> lane1_3600STDY6167961_AGTTGAAA_L001_17236_1 lane1_3600STDY6167962_GACCGGAA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167963_GATCGAAC_L001_17236_1 lane1_3600STDY6167964_GTATAGGG_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167965_GGTAAGAG_L001_17236_1 lane1_3600STDY6167966_AGTCCGAT_L001_17236_1 
#>                                      "0221"                                      "0112" 
#> lane1_3600STDY6167967_ATACAGGC_L001_17236_1 lane1_3600STDY6167968_TGAGACTC_L001_17236_1 
#>                                      "0111"                                      "0113" 
#> lane1_3600STDY6167969_ACTCAGGA_L001_17236_1 lane1_3600STDY6167970_GTGTCTGA_L001_17236_1 
#>                                      "0113"                                      "0342" 
#> lane1_3600STDY6167971_CTTGAATC_L001_17236_1 lane1_3600STDY6167972_CCGCATGA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167973_AAGTAACA_L001_17236_1 lane1_3600STDY6167974_GTGGTACT_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167975_AGCTGTGC_L001_17236_1 lane1_3600STDY6167976_TTACCTTC_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167977_TCCGGGTA_L001_17236_1 lane1_3600STDY6167978_CTACGTAA_L001_17236_1 
#>                                      "0112"                                      "0111" 
#> lane1_3600STDY6167979_TCGGACCG_L001_17236_1 lane1_3600STDY6167980_ATGCGTCG_L001_17236_1 
#>                                      "0111"                                       "013" 
#> lane1_3600STDY6167981_TTCTTAGC_L001_17236_1 lane1_3600STDY6167982_TGAGTAAG_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6167983_AAGTGATA_L001_17236_1 lane1_3600STDY6167984_TCGATGCG_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167985_TATTCTGG_L001_17236_1 lane1_3600STDY6167986_AGCCGTGA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167987_AAGCCTTC_L001_17236_1 lane1_3600STDY6167988_AGGTATCC_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167989_AGGATCTC_L001_17236_1 lane1_3600STDY6167990_CTGTTTGA_L001_17236_1 
#>                                      "0221"                                      "0111" 
#> lane1_3600STDY6167991_GGAATTTC_L001_17236_1 lane1_3600STDY6167992_TTGGAGCA_L001_17236_1 
#>                                       "013"                                      "0342" 
#> lane1_3600STDY6167993_AAGGTCTG_L001_17236_1 lane1_3600STDY6167994_AATTAGGC_L001_17236_1 
#>                                      "0342"                                      "0113" 
#> lane1_3600STDY6167995_AATCGGGT_L001_17236_1 lane1_3600STDY6167996_AGGTAGAC_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167997_CTTATTCC_L001_17236_1 lane1_3600STDY6167998_CAGGCTCT_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167999_AAAGCACG_L001_17236_1 lane1_3600STDY6168000_GTATACAC_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6168001_GGACATAT_L001_17236_1 lane1_3600STDY6168002_CGGTTGGG_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6168003_GTCCGTGA_L001_17236_1 lane1_3600STDY6168004_GCCGAACC_L001_17236_1 
#>                                      "0111"                                       "013" 
#> lane1_3600STDY6168005_ACTTTACT_L001_17236_1 lane1_3600STDY6168006_GGGTCCAT_L001_17236_1 
#>                                      "0342"                                       "013" 
#> lane1_3600STDY6168007_ATAACTAG_L001_17236_1 lane1_3600STDY6168008_AATAGAGA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6168009_TCACCATT_L001_17236_1 lane1_3600STDY6168010_CGCCTGAT_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6168011_GCGTGAAC_L001_17236_1 lane1_3600STDY6168012_TAAGGGTG_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6168013_GGTGTCGA_L001_17236_1 lane1_3600STDY6168014_CCGTTAGG_L001_17236_1 
#>                                      "0112"                                       "013" 
#> lane1_3600STDY6168015_TGGCAAAA_L001_17236_1 lane1_3600STDY6168016_CCTACCCG_L001_17236_1 
#>                                      "0111"                                      "0222" 
#> lane1_3600STDY6168017_AACAGCGC_L001_17236_1 lane1_3600STDY6168018_TATACATC_L001_17236_1 
#>                                       "013"                                      "0221" 
#> lane1_3600STDY6168019_AAGCGACT_L001_17236_1 lane1_3600STDY6168020_GAAGCGCA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6168021_ACCTCTAC_L001_17236_1 lane1_3600STDY6168022_GATTGCGT_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6168023_GCTGGTTG_L001_17236_1 lane1_3600STDY6168024_ATCGTCCT_L001_17236_1 
#>                                      "0221"                                      "0112" 
#> lane1_3600STDY6168025_GGACACGG_L001_17236_1 lane1_3600STDY6168026_CGCACCTA_L001_17236_1 
#>                                      "0112"                                      "0111" 
#> lane1_3600STDY6168027_CTTCGGCT_L001_17236_1 lane1_3600STDY6168028_CGAATCGA_L001_17236_1 
#>                                      "0111"                                       "014" 
#> lane1_3600STDY6168029_TAACAACT_L001_17236_1 lane1_3600STDY6168030_AGCTCTTT_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168031_TAATCCCT_L001_17236_1 lane1_3600STDY6168032_AGGACACT_L001_17236_1 
#>                                      "0113"                                      "0342" 
#> lane1_3600STDY6168033_TTACACTA_L001_17236_1 lane1_3600STDY6168034_AAACATCA_L001_17236_1 
#>                                      "0111"                                      "0113" 
#> lane1_3600STDY6168035_CCATAGCT_L001_17236_1 lane1_3600STDY6168036_GTTATGGC_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6168037_ATCCCCTA_L001_17236_1 lane1_3600STDY6168038_CATACTAC_L001_17236_1 
#>                                      "0111"                                       "014" 
#> lane1_3600STDY6168039_CAATTGTT_L001_17236_1 lane1_3600STDY6168040_AAACCCGT_L001_17236_1 
#>                                       "014"                                      "0221" 
#> lane1_3600STDY6168041_CAGATTTC_L001_17236_1 lane1_3600STDY6168042_GCGTAGGT_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6168043_GGCATTCG_L001_17236_1 lane1_3600STDY6168044_TGGGGCTT_L001_17236_1 
#>                                      "0113"                                      "0112" 
#> lane1_3600STDY6168045_CTGACTAC_L001_17236_1 lane1_3600STDY6168046_AACTTTTA_L001_17236_1 
#>                                      "0112"                                      "0342" 
#> lane1_3600STDY6168047_AGGGATTC_L001_17236_1 lane1_3600STDY6168048_CCGAGTAG_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6168049_GGGGACTA_L001_17236_1 lane1_3600STDY6168050_GGAGTTGA_L001_17236_1 
#>                                      "0113"                                      "0111" 
#> lane1_3600STDY6168051_AGCTCATC_L001_17236_1 lane1_3600STDY6168052_TAATCAAC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168053_ACTGGTCG_L001_17236_1 lane1_3600STDY6168054_GACGATTG_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168055_AGCGATGA_L001_17236_1 lane1_3600STDY6168056_GAAGAGAT_L001_17236_1 
#>                                      "0113"                                      "0342" 
#> lane1_3600STDY6168057_CGTATGCA_L001_17236_1 lane1_3600STDY6168058_CACGTGCG_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6168059_GCTTAAAC_L001_17236_1 lane1_3600STDY6168060_GTTCCGCA_L001_17236_1 
#>                                       "013"                                      "0111" 
#> lane1_3600STDY6168061_GTATCGTC_L001_17236_1 lane1_3600STDY6168062_GTCCTCAC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168063_GTACGGAC_L001_17236_1 lane1_3600STDY6168064_CATTTTGC_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6168065_TCCTCTCT_L001_17236_1 lane1_3600STDY6168066_AGCAACGA_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6168067_ACAGAAGA_L001_17236_1 lane1_3600STDY6168068_CGACCCTT_L001_17236_1 
#>                                       "013"                                      "0111" 
#> lane1_3600STDY6168069_CTGCCTAG_L001_17236_1 lane1_3600STDY6168070_GAGCGCAT_L001_17236_1 
#>                                      "0221"                                       "013" 
#> lane1_3600STDY6168071_AACTTATC_L001_17236_1 lane1_3600STDY6168072_CCGATGTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168073_TTACTACC_L001_17236_1 lane1_3600STDY6168074_CAAGGAGC_L001_17236_1 
#>                                       "013"                                       "014" 
#> lane1_3600STDY6168075_TGGTTGAC_L001_17236_1 lane1_3600STDY6168076_ACCTGCTG_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane4_3600STDY6184181_ATCACGTT_L004_17480_1 lane4_3600STDY6184182_CGATGTTT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184183_TTAGGCAT_L004_17480_1 lane4_3600STDY6184184_TGACCACT_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184185_ACAGTGGT_L004_17480_1 lane4_3600STDY6184186_GCCAATGT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184187_CAGATCTG_L004_17480_1 lane4_3600STDY6184188_ACTTGATG_L004_17480_1 
#>                                       "032"                                      "0211" 
#> lane4_3600STDY6184189_GATCAGCG_L004_17480_1 lane4_3600STDY6184190_TAGCTTGT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184191_GGCTACAG_L004_17480_1 lane4_3600STDY6184192_CTTGTACT_L004_17480_1 
#>                                       "032"                                      "0211" 
#> lane4_3600STDY6184193_TGGTTGTT_L004_17480_1 lane4_3600STDY6184194_TCTCGGTT_L004_17480_1 
#>                                       "032"                                       "031" 
#> lane4_3600STDY6184195_TAAGCGTT_L004_17480_1 lane4_3600STDY6184196_TCCGTCTT_L004_17480_1 
#>                                       "031"                                      "0341" 
#> lane4_3600STDY6184197_TGTACCTT_L004_17480_1 lane4_3600STDY6184198_TTCTGTGT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184199_TCTGCTGT_L004_17480_1 lane4_3600STDY6184200_TTGGAGGT_L004_17480_1 
#>                                      "0212"                                      "0212" 
#> lane4_3600STDY6184201_TCGAGCGT_L004_17480_1 lane4_3600STDY6184202_TGATACGT_L004_17480_1 
#>                                       "031"                                       "032" 
#> lane4_3600STDY6184203_TGCATAGT_L004_17480_1 lane4_3600STDY6184204_TTGACTCT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184205_TGCGATCT_L004_17480_1 lane4_3600STDY6184206_TTCCTGCT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184207_TAGTGACT_L004_17480_1 lane4_3600STDY6184208_TACAGGAT_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184209_TCCTCAAT_L004_17480_1 lane4_3600STDY6184210_TGTGGTTG_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184211_TAGTCTTG_L004_17480_1 lane4_3600STDY6184212_TTCCATTG_L004_17480_1 
#>                                      "0212"                                      "0211" 
#> lane4_3600STDY6184213_TCGAAGTG_L004_17480_1 lane4_3600STDY6184214_TAACGCTG_L004_17480_1 
#>                                      "0221"                                      "0341" 
#> lane4_3600STDY6184215_TTGGTATG_L004_17480_1 lane4_3600STDY6184216_TGAACTGG_L004_17480_1 
#>                                      "0213"                                      "0222" 
#> lane4_3600STDY6184217_TACTTCGG_L004_17480_1 lane4_3600STDY6184218_TCTCACGG_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184219_TCAGGAGG_L004_17480_1 lane4_3600STDY6184220_TAAGTTCG_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184221_TCCAGTCG_L004_17480_1 lane4_3600STDY6184222_TGTATGCG_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184223_TCATTGAG_L004_17480_1 lane4_3600STDY6184224_TGGCTCAG_L004_17480_1 
#>                                      "0212"                                      "0213" 
#> lane4_3600STDY6184225_TATGCCAG_L004_17480_1 lane4_3600STDY6184226_TCAGATTC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184227_TACTAGTC_L004_17480_1 lane4_3600STDY6184228_TTCAGCTC_L004_17480_1 
#>                                      "0212"                                       "032" 
#> lane4_3600STDY6184229_TGTCTATC_L004_17480_1 lane4_3600STDY6184230_TATGTGGC_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184231_TTACTCGC_L004_17480_1 lane4_3600STDY6184232_TCGTTAGC_L004_17480_1 
#>                                      "0213"                                      "0341" 
#> lane4_3600STDY6184233_TACCGAGC_L004_17480_1 lane4_3600STDY6184234_TGTTCTCC_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184235_TTCGCACC_L004_17480_1 lane4_3600STDY6184236_TTGCGTAC_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184237_TCTACGAC_L004_17480_1 lane4_3600STDY6184238_TGACAGAC_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184239_TAGAACAC_L004_17480_1 lane4_3600STDY6184240_TCATCCTA_L004_17480_1 
#>                                      "0212"                                      "0212" 
#> lane4_3600STDY6184241_TGCTGATA_L004_17480_1 lane4_3600STDY6184242_TAGACGGA_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184243_TGTGAAGA_L004_17480_1 lane4_3600STDY6184244_TCTCTTCA_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184245_TTGTTCCA_L004_17480_1 lane4_3600STDY6184246_TGAAGCCA_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184247_TACCACCA_L004_17480_1 lane4_3600STDY6184248_TGCGTGAA_L004_17480_1 
#>                                      "0222"                                      "0212" 
#> lane4_3600STDY6184249_GGTGAGTT_L004_17480_1 lane4_3600STDY6184250_GATCTCTT_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184251_GTGTCCTT_L004_17480_1 lane4_3600STDY6184252_GACGGATT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184253_GCAACATT_L004_17480_1 lane4_3600STDY6184254_GGTCGTGT_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184255_GAATCTGT_L004_17480_1 lane4_3600STDY6184256_GTACATCT_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184257_GAGGTGCT_L004_17480_1 lane4_3600STDY6184258_GCATGGCT_L004_17480_1 
#>                                      "0232"                                      "0211" 
#> lane4_3600STDY6184259_GTTAGCCT_L004_17480_1 lane4_3600STDY6184260_GTCGCTAT_L004_17480_1 
#>                                      "0211"                                      "0222" 
#> lane4_3600STDY6184261_GGAATGAT_L004_17480_1 lane4_3600STDY6184262_GAGCCAAT_L004_17480_1 
#>                                      "0232"                                      "0212" 
#> lane4_3600STDY6184263_GCTCCTTG_L004_17480_1 lane4_3600STDY6184264_GTAAGGTG_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184265_GAGGATGG_L004_17480_1 lane4_3600STDY6184266_GTTGTCGG_L004_17480_1 
#>                                      "0211"                                       "032" 
#> lane4_3600STDY6184267_GGATTAGG_L004_17480_1 lane4_3600STDY6184268_GATAGAGG_L004_17480_1 
#>                                      "0213"                                      "0211" 
#> lane4_3600STDY6184269_GTGTGTCG_L004_17480_1 lane4_3600STDY6184270_GCAATCCG_L004_17480_1 
#>                                      "0341"                                      "0232" 
#> lane4_3600STDY6184271_GACCTTAG_L004_17480_1 lane4_3600STDY6184272_GCCTGTTC_L004_17480_1 
#>                                      "0222"                                      "0211" 
#> lane4_3600STDY6184273_GCACTGTC_L004_17480_1 lane4_3600STDY6184274_GCTAACTC_L004_17480_1 
#>                                      "0211"                                      "0341" 
#> lane4_3600STDY6184275_GATTCATC_L004_17480_1 lane4_3600STDY6184276_GTCTTGGC_L004_17480_1 
#>                                      "0213"                                       "032" 
#> lane4_3600STDY6184277_GTAGAAGC_L004_17480_1 lane4_3600STDY6184278_GATGGTCC_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184279_GTGCTACC_L004_17480_1 lane4_3600STDY6184280_GCGATTAC_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184281_GGTTGGAC_L004_17480_1 lane4_3600STDY6184282_GGCACAAC_L004_17480_1 
#>                                      "0341"                                      "0222" 
#> lane4_3600STDY6184283_GACACTTA_L004_17480_1 lane4_3600STDY6184284_GTGCAGTA_L004_17480_1 
#>                                      "0211"                                      "0341" 
#> lane4_3600STDY6184285_GGAGTCTA_L004_17480_1 lane4_3600STDY6184286_GCTATGGA_L004_17480_1 
#>                                      "0212"                                      "0211" 
#> lane4_3600STDY6184287_GAGTGCGA_L004_17480_1 lane4_3600STDY6184288_GTAACCGA_L004_17480_1 
#>                                      "0212"                                      "0212" 
#> lane4_3600STDY6184289_GGCAAGCA_L004_17480_1 lane4_3600STDY6184290_GCCTTACA_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184291_GAACGACA_L004_17480_1 lane4_3600STDY6184292_GCAGGTAA_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184293_GCGTCGAA_L004_17480_1 lane4_3600STDY6184294_CGTTCGGT_L004_17480_1 
#>                                      "0341"                                      "0222" 
#> lane4_3600STDY6184295_CACCAGGT_L004_17480_1 lane4_3600STDY6184296_CTGCGAGT_L004_17480_1 
#>                                      "0211"                                      "0341" 
#> lane4_3600STDY6184297_CCGTATCT_L004_17480_1 lane4_3600STDY6184298_CGCTTCCT_L004_17480_1 
#>                                      "0211"                                      "0341" 
#> lane4_3600STDY6184299_CAAGACCT_L004_17480_1 lane4_3600STDY6184300_CACACACT_L004_17480_1 
#>                                      "0211"                                       "032" 
#> lane4_3600STDY6184301_CCTAGTAT_L004_17480_1 lane4_3600STDY6184302_CCACCGAT_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184303_CTTCACAT_L004_17480_1 lane4_3600STDY6184304_CTATCATG_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184305_CATGAATG_L004_17480_1 lane4_3600STDY6184306_CCACTTGG_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184307_CTGTACGG_L004_17480_1 lane4_3600STDY6184308_CTAGATAG_L004_17480_1 
#>                                      "0211"                                      "0341" 
#> lane4_3600STDY6184309_CACTCGAG_L004_17480_1 lane4_3600STDY6184310_CCGACAAG_L004_17480_1 
#>                                      "0222"                                       "032" 
#> lane4_3600STDY6184311_CTTGCTTC_L004_17480_1 lane4_3600STDY6184312_CATAGGTC_L004_17480_1 
#>                                      "0212"                                      "0222" 
#> lane4_3600STDY6184313_CACATTGC_L004_17480_1 lane4_3600STDY6184314_CGCTAAGC_L004_17480_1 
#>                                      "0213"                                      "0212" 
#> lane4_3600STDY6184315_CAACCTCC_L004_17480_1 lane4_3600STDY6184316_CAGCTGAC_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184317_CTCAAGAC_L004_17480_1 lane4_3600STDY6184318_CGTGTCAC_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184319_CCATGCAC_L004_17480_1 lane4_3600STDY6184320_CGTTACTA_L004_17480_1 
#>                                      "0222"                                      "0341" 
#> lane4_3600STDY6184321_CAAGTAGA_L004_17480_1 lane4_3600STDY6184322_CTCTCTCA_L004_17480_1 
#>                                      "0213"                                      "0211" 
#> lane4_3600STDY6184323_CGACTGCA_L004_17480_1 lane4_3600STDY6184324_CCTGAGCA_L004_17480_1 
#>                                      "0212"                                      "0222" 
#> lane4_3600STDY6184325_CAGGCTAA_L004_17480_1 lane4_3600STDY6184326_CGGAGGAA_L004_17480_1 
#>                                       "032"                                      "0211" 
#> lane4_3600STDY6184327_AGGAGATT_L004_17480_1 lane4_3600STDY6184328_AGGCAGCT_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184329_ACGTTCAT_L004_17480_1 lane4_3600STDY6184330_AACGTGTG_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184331_AGACCGTG_L004_17480_1 lane4_3600STDY6184332_ACCTCTGG_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184333_ATCCTAGG_L004_17480_1 lane4_3600STDY6184334_ATCAACCG_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184335_AGGTCACG_L004_17480_1 lane4_3600STDY6184336_ACTGTTAG_L004_17480_1 
#>                                       "032"                                      "0211" 
#> lane4_3600STDY6184337_AAGAGTAG_L004_17480_1 lane4_3600STDY6184338_ATTCGGAG_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184339_ACGCAATC_L004_17480_1 lane4_3600STDY6184340_ACAAGTGC_L004_17480_1 
#>                                      "0213"                                      "0211" 
#> lane4_3600STDY6184341_ATGGATCC_L004_17480_1 lane4_3600STDY6184342_AGAGGACC_L004_17480_1 
#>                                      "0212"                                      "0222" 
#> lane4_3600STDY6184343_ATCTCCAC_L004_17480_1 lane4_3600STDY6184344_ATTGGCTA_L004_17480_1 
#>                                      "0213"                                      "0212" 
#> lane4_3600STDY6184345_AATCCTGA_L004_17480_1 lane4_3600STDY6184346_AGGATTCA_L004_17480_1 
#>                                       "032"                                      "0222" 
#> lane4_3600STDY6184347_AACTGGCA_L004_17480_1 lane4_3600STDY6184348_ACAACGCA_L004_17480_1 
#>                                      "0221"                                      "0222" 
#> lane4_3600STDY6184349_CGGAAACA_L004_17480_1 lane4_3600STDY6184350_AATGAATT_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184351_TAGGACCC_L004_17480_1 lane4_3600STDY6184352_TCTCAGTG_L004_17480_1 
#>                                      "0341"                                      "0222" 
#> lane4_3600STDY6184353_CATGGGAA_L004_17480_1 lane4_3600STDY6184354_CCTAAGAT_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184355_CTCAGATA_L004_17480_1 lane4_3600STDY6184356_CCCATAGG_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184357_GCTATGAC_L004_17480_1 lane4_3600STDY6184358_GCTGTGAA_L004_17480_1 
#>                                      "0222"                                      "0222" 
#> lane4_3600STDY6184359_ACCTTCAA_L004_17480_1 lane4_3600STDY6184360_ACAAAGCC_L004_17480_1 
#>                                      "0223"                                      "0221" 
#> lane4_3600STDY6184361_CAAAACCG_L004_17480_1 lane4_3600STDY6184362_GCTGGACA_L004_17480_1 
#>                                      "0211"                                       "032" 
#> lane4_3600STDY6184363_AAGTCGTA_L004_17480_1 lane4_3600STDY6184364_CATCCGTA_L004_17480_1 
#>                                      "0211"                                      "0232" 
#> lane4_3600STDY6184365_TTGTGTCT_L004_17480_1 lane4_3600STDY6184366_TGCTCTAG_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184367_ACCCAACA_L004_17480_1 lane4_3600STDY6184368_CGATCTGA_L004_17480_1 
#>                                      "0222"                                      "0211" 
#> lane4_3600STDY6184369_GTTCCACG_L004_17480_1 lane4_3600STDY6184370_ACTCTTTC_L004_17480_1 
#>                                      "0212"                                      "0213" 
#> lane4_3600STDY6184371_TATTGGAG_L004_17480_1 lane4_3600STDY6184372_TAAACATA_L004_17480_1 
#>                                      "0221"                                      "0221" 
#> lane4_3600STDY6184373_GTAAGATA_L004_17480_1 lane4_3600STDY6184374_TACCGCAA_L004_17480_1 
#>                                      "0223"                                       "032" 
#> lane4_3600STDY6184375_TATCTCCT_L004_17480_1 lane4_3600STDY6184376_TGTCATCT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184377_ATAGCTCT_L004_17480_1 lane4_3600STDY6184378_AGTCCAAC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184379_TTTGGGCA_L004_17480_1 lane4_3600STDY6184380_TCTGACGC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184381_TGTCGACT_L004_17480_1 lane4_3600STDY6184382_GTCACGTA_L004_17480_1 
#>                                       "032"                                       "031" 
#> lane4_3600STDY6184383_TTGAGCGA_L004_17480_1 lane4_3600STDY6184384_GAGACATA_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184385_GTCAAGCT_L004_17480_1 lane4_3600STDY6184386_AGCAAGTT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184387_GACGCTCA_L004_17480_1 lane4_3600STDY6184388_ACGGCAGC_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184389_AGAACTGA_L004_17480_1 lane4_3600STDY6184390_CGCCTTTG_L004_17480_1 
#>                                      "0212"                                      "0222" 
#> lane4_3600STDY6184391_TAAGGTCA_L004_17480_1 lane4_3600STDY6184392_ACGTTGGC_L004_17480_1 
#>                                      "0222"                                      "0212" 
#> lane4_3600STDY6184393_CCAGCTTA_L004_17480_1 lane4_3600STDY6184394_GAATCCTA_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184395_ACTTCGTA_L004_17480_1 lane4_3600STDY6184396_TAGTCGGT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184397_CGCACGAG_L004_17480_1 lane4_3600STDY6184398_ACGTACTA_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184399_AGCGCCAA_L004_17480_1 lane4_3600STDY6184400_GCCTGCCC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184401_AGGACGAT_L004_17480_1 lane4_3600STDY6184402_CTTGACCG_L004_17480_1 
#>                                      "0213"                                       "032" 
#> lane4_3600STDY6184403_AGGTCTAA_L004_17480_1 lane4_3600STDY6184404_CGAGATCC_L004_17480_1 
#>                                      "0213"                                       "032" 
#> lane4_3600STDY6184405_ATTAGCGG_L004_17480_1 lane4_3600STDY6184406_GCGCTGAT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184407_TGCTGAAC_L004_17480_1 lane4_3600STDY6184408_GAGGGCAG_L004_17480_1 
#>                                       "032"                                      "0213" 
#> lane4_3600STDY6184409_GTTTTCAC_L004_17480_1 lane4_3600STDY6184410_GAGATGCC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184411_TTGAGAAG_L004_17480_1 lane4_3600STDY6184412_GCATCCGG_L004_17480_1 
#>                                       "032"                                      "0232" 
#> lane4_3600STDY6184413_GTCACCAG_L004_17480_1 lane4_3600STDY6184414_GAGGTCGC_L004_17480_1 
#>                                      "0211"                                      "0222" 
#> lane4_3600STDY6184415_AAGGGGTA_L004_17480_1 lane4_3600STDY6184416_TTTTACGT_L004_17480_1 
#>                                      "0212"                                      "0211" 
#> lane4_3600STDY6184417_TTCCTACA_L004_17480_1 lane4_3600STDY6184418_AGTGTAGT_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184419_GTGGCCAA_L004_17480_1 lane4_3600STDY6184420_AAATACTC_L004_17480_1 
#>                                      "0212"                                       "032" 
#> lane4_3600STDY6184421_CACCCGTC_L004_17480_1 lane4_3600STDY6184422_TCGTGGTT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184423_ACTTGGGG_L004_17480_1 lane4_3600STDY6184424_GGCTGCTT_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184425_CAGGGTCG_L004_17480_1 lane4_3600STDY6184426_CTCGTCGA_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184427_TCTACAGT_L004_17480_1 lane4_3600STDY6184428_CTTCTAGA_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184429_AACGGCTT_L004_17480_1 lane4_3600STDY6184430_ATAAGACT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184431_GTTTTTCG_L004_17480_1 lane4_3600STDY6184432_ATTGGTAT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184433_CGCCAGTA_L004_17480_1 lane4_3600STDY6184434_AAGCCGAA_L004_17480_1 
#>                                      "0223"                                       "032" 
#> lane4_3600STDY6184435_TGACCCAC_L004_17480_1 lane4_3600STDY6184436_ATTGCACA_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184437_CTTTTGAT_L004_17480_1 lane4_3600STDY6184438_TAGCGAGA_L004_17480_1 
#>                                      "0213"                                      "0222" 
#> lane4_3600STDY6184439_TTCGCAGG_L004_17480_1 lane4_3600STDY6184440_TAGTTATT_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184441_TCCTCCGA_L004_17480_1 lane4_3600STDY6184442_GCGGGTCT_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184443_GATTCTAT_L004_17480_1 lane4_3600STDY6184444_ATGCAAAG_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184445_GTCTGAGG_L004_17480_1 lane4_3600STDY6184446_TCTGGCGA_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184447_AATTTGCG_L004_17480_1 lane4_3600STDY6184448_TGGGTTGG_L004_17480_1 
#>                                      "0222"                                      "0232" 
#> lane4_3600STDY6184449_AGTTGAAA_L004_17480_1 lane4_3600STDY6184450_GACCGGAA_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184451_GATCGAAC_L004_17480_1 lane4_3600STDY6184452_GTATAGGG_L004_17480_1 
#>                                      "0342"                                      "0341" 
#> lane4_3600STDY6184453_GGTAAGAG_L004_17480_1 lane4_3600STDY6184454_AGTCCGAT_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184455_ATACAGGC_L004_17480_1 lane4_3600STDY6184456_TGAGACTC_L004_17480_1 
#>                                      "0213"                                      "0222" 
#> lane4_3600STDY6184457_ACTCAGGA_L004_17480_1 lane4_3600STDY6184458_GTGTCTGA_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184459_CTTGAATC_L004_17480_1 lane4_3600STDY6184460_CCGCATGA_L004_17480_1 
#>                                      "0211"                                      "0222" 
#> lane4_3600STDY6184461_AAGTAACA_L004_17480_1 lane4_3600STDY6184462_GTGGTACT_L004_17480_1 
#>                                      "0222"                                      "0222" 
#> lane4_3600STDY6184463_AGCTGTGC_L004_17480_1 lane4_3600STDY6184464_TTACCTTC_L004_17480_1 
#>                                      "0222"                                      "0222" 
#> lane4_3600STDY6184465_TCCGGGTA_L004_17480_1 lane4_3600STDY6184466_CTACGTAA_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184467_TCGGACCG_L004_17480_1 lane4_3600STDY6184468_ATGCGTCG_L004_17480_1 
#>                                      "0211"                                       "032" 
#> lane4_3600STDY6184469_TTCTTAGC_L004_17480_1 lane4_3600STDY6184470_TGAGTAAG_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184471_AAGTGATA_L004_17480_1 lane4_3600STDY6184472_TCGATGCG_L004_17480_1 
#>                                      "0213"                                      "0341" 
#> lane4_3600STDY6184473_TATTCTGG_L004_17480_1 lane4_3600STDY6184474_AGCCGTGA_L004_17480_1 
#>                                      "0213"                                      "0211" 
#> lane4_3600STDY6184475_AAGCCTTC_L004_17480_1 lane4_3600STDY6184476_AGGTATCC_L004_17480_1 
#>                                      "0213"                                      "0341" 
#> lane4_3600STDY6184477_AGGATCTC_L004_17480_1 lane4_3600STDY6184478_CTGTTTGA_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184479_GGAATTTC_L004_17480_1 lane4_3600STDY6184480_TTGGAGCA_L004_17480_1 
#>                                      "0341"                                      "0213" 
#> lane4_3600STDY6184481_AAGGTCTG_L004_17480_1 lane4_3600STDY6184482_AATTAGGC_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184483_AATCGGGT_L004_17480_1 lane4_3600STDY6184484_AGGTAGAC_L004_17480_1 
#>                                      "0212"                                      "0212" 
#> lane4_3600STDY6184485_CTTATTCC_L004_17480_1 lane4_3600STDY6184486_CAGGCTCT_L004_17480_1 
#>                                      "0341"                                      "0222" 
#> lane4_3600STDY6184487_AAAGCACG_L004_17480_1 lane4_3600STDY6184488_GTATACAC_L004_17480_1 
#>                                      "0222"                                      "0211" 
#> lane4_3600STDY6184489_GGACATAT_L004_17480_1 lane4_3600STDY6184490_CGGTTGGG_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184491_GTCCGTGA_L004_17480_1 lane4_3600STDY6184492_GCCGAACC_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184493_ACTTTACT_L004_17480_1 lane4_3600STDY6184494_GGGTCCAT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184495_ATAACTAG_L004_17480_1 lane4_3600STDY6184496_AATAGAGA_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184497_TCACCATT_L004_17480_1 lane4_3600STDY6184498_CGCCTGAT_L004_17480_1 
#>                                      "0341"                                      "0222" 
#> lane4_3600STDY6184499_GCGTGAAC_L004_17480_1 lane4_3600STDY6184500_TAAGGGTG_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184501_GGTGTCGA_L004_17480_1 lane4_3600STDY6184502_CCGTTAGG_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184503_TGGCAAAA_L004_17480_1 lane4_3600STDY6184504_CCTACCCG_L004_17480_1 
#>                                      "0213"                                      "0222" 
#> lane4_3600STDY6184505_AACAGCGC_L004_17480_1 lane4_3600STDY6184506_TATACATC_L004_17480_1 
#>                                      "0213"                                      "0341" 
#> lane4_3600STDY6184507_AAGCGACT_L004_17480_1 lane4_3600STDY6184508_GAAGCGCA_L004_17480_1 
#>                                      "0211"                                      "0222" 
#> lane4_3600STDY6184509_ACCTCTAC_L004_17480_1 lane4_3600STDY6184510_GATTGCGT_L004_17480_1 
#>                                      "0222"                                      "0232" 
#> lane4_3600STDY6184511_GCTGGTTG_L004_17480_1 lane4_3600STDY6184512_ATCGTCCT_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184513_GGACACGG_L004_17480_1 lane4_3600STDY6184514_CGCACCTA_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184515_CTTCGGCT_L004_17480_1 lane4_3600STDY6184516_CGAATCGA_L004_17480_1 
#>                                      "0212"                                       "032" 
#> lane4_3600STDY6184517_TAACAACT_L004_17480_1 lane4_3600STDY6184518_AGCTCTTT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184519_TAATCCCT_L004_17480_1 lane4_3600STDY6184520_AGGACACT_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184521_TTACACTA_L004_17480_1 lane4_3600STDY6184522_AAACATCA_L004_17480_1 
#>                                      "0341"                                      "0213" 
#> lane4_3600STDY6184523_CCATAGCT_L004_17480_1 lane4_3600STDY6184524_GTTATGGC_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184525_ATCCCCTA_L004_17480_1 lane4_3600STDY6184526_CATACTAC_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184527_CAATTGTT_L004_17480_1 lane4_3600STDY6184528_AAACCCGT_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184529_CAGATTTC_L004_17480_1 lane4_3600STDY6184530_GCGTAGGT_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184531_GGCATTCG_L004_17480_1 lane4_3600STDY6184532_TGGGGCTT_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184533_CTGACTAC_L004_17480_1 lane4_3600STDY6184534_AACTTTTA_L004_17480_1 
#>                                      "0212"                                      "0211" 
#> lane4_3600STDY6184535_AGGGATTC_L004_17480_1 lane4_3600STDY6184536_CCGAGTAG_L004_17480_1 
#>                                      "0221"                                      "0212" 
#> lane4_3600STDY6184537_GGGGACTA_L004_17480_1 lane4_3600STDY6184538_GGAGTTGA_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184539_AGCTCATC_L004_17480_1 lane4_3600STDY6184540_TAATCAAC_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184541_ACTGGTCG_L004_17480_1 lane4_3600STDY6184542_GACGATTG_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184543_AGCGATGA_L004_17480_1 lane4_3600STDY6184544_GAAGAGAT_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184545_CGTATGCA_L004_17480_1 lane4_3600STDY6184546_CACGTGCG_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184547_GCTTAAAC_L004_17480_1 lane4_3600STDY6184548_GTTCCGCA_L004_17480_1 
#>                                       "032"                                      "0221" 
#> lane4_3600STDY6184549_GTATCGTC_L004_17480_1 lane4_3600STDY6184550_GTCCTCAC_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184551_GTACGGAC_L004_17480_1 lane4_3600STDY6184552_CATTTTGC_L004_17480_1 
#>                                      "0221"                                      "0221" 
#> lane4_3600STDY6184553_TCCTCTCT_L004_17480_1 lane4_3600STDY6184554_AGCAACGA_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184555_ACAGAAGA_L004_17480_1 lane4_3600STDY6184556_CGACCCTT_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184557_CTGCCTAG_L004_17480_1 lane4_3600STDY6184558_GAGCGCAT_L004_17480_1 
#>                                      "0212"                                      "0222" 
#> lane4_3600STDY6184559_AACTTATC_L004_17480_1 lane4_3600STDY6184560_CCGATGTA_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184561_TTACTACC_L004_17480_1 lane4_3600STDY6184562_CAAGGAGC_L004_17480_1 
#>                                      "0341"                                      "0221" 
#> lane4_3600STDY6184563_TGGTTGAC_L004_17480_1 lane4_3600STDY6184564_ACCTGCTG_L004_17480_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6183797_ATCACGTT_L001_17592_1 lane1_3600STDY6183798_CGATGTTT_L001_17592_1 
#>                                      "0221"                                       "031" 
#> lane1_3600STDY6183799_TTAGGCAT_L001_17592_1 lane1_3600STDY6183800_TGACCACT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183801_ACAGTGGT_L001_17592_1 lane1_3600STDY6183802_GCCAATGT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183803_CAGATCTG_L001_17592_1 lane1_3600STDY6183804_ACTTGATG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183805_GATCAGCG_L001_17592_1 lane1_3600STDY6183806_TAGCTTGT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183807_GGCTACAG_L001_17592_1 lane1_3600STDY6183808_CTTGTACT_L001_17592_1 
#>                                       "031"                                      "0223" 
#> lane1_3600STDY6183809_TGGTTGTT_L001_17592_1 lane1_3600STDY6183810_TCTCGGTT_L001_17592_1 
#>                                       "031"                                      "0221" 
#> lane1_3600STDY6183811_TAAGCGTT_L001_17592_1 lane1_3600STDY6183812_TCCGTCTT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183813_TGTACCTT_L001_17592_1 lane1_3600STDY6183814_TTCTGTGT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183815_TCTGCTGT_L001_17592_1 lane1_3600STDY6183816_TTGGAGGT_L001_17592_1 
#>                                       "033"                                      "0221" 
#> lane1_3600STDY6183817_TCGAGCGT_L001_17592_1 lane1_3600STDY6183818_TGATACGT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183819_TGCATAGT_L001_17592_1 lane1_3600STDY6183820_TTGACTCT_L001_17592_1 
#>                                       "031"                                      "0221" 
#> lane1_3600STDY6183821_TGCGATCT_L001_17592_1 lane1_3600STDY6183822_TTCCTGCT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183823_TAGTGACT_L001_17592_1 lane1_3600STDY6183824_TACAGGAT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183825_TCCTCAAT_L001_17592_1 lane1_3600STDY6183826_TGTGGTTG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183827_TAGTCTTG_L001_17592_1 lane1_3600STDY6183828_TTCCATTG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183829_TCGAAGTG_L001_17592_1 lane1_3600STDY6183830_TAACGCTG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183831_TTGGTATG_L001_17592_1 lane1_3600STDY6183832_TGAACTGG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183833_TACTTCGG_L001_17592_1 lane1_3600STDY6183834_TCTCACGG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183835_TCAGGAGG_L001_17592_1 lane1_3600STDY6183836_TAAGTTCG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183837_TCCAGTCG_L001_17592_1 lane1_3600STDY6183838_TGTATGCG_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183839_TCATTGAG_L001_17592_1 lane1_3600STDY6183840_TGGCTCAG_L001_17592_1 
#>                                      "0231"                                       "033" 
#> lane1_3600STDY6183841_TATGCCAG_L001_17592_1 lane1_3600STDY6183842_TCAGATTC_L001_17592_1 
#>                                      "0231"                                       "031" 
#> lane1_3600STDY6183843_TACTAGTC_L001_17592_1 lane1_3600STDY6183844_TTCAGCTC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183845_TGTCTATC_L001_17592_1 lane1_3600STDY6183846_TATGTGGC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183847_TTACTCGC_L001_17592_1 lane1_3600STDY6183848_TCGTTAGC_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183849_TACCGAGC_L001_17592_1 lane1_3600STDY6183850_TGTTCTCC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183851_TTCGCACC_L001_17592_1 lane1_3600STDY6183852_TTGCGTAC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183853_TCTACGAC_L001_17592_1 lane1_3600STDY6183854_TGACAGAC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183855_TAGAACAC_L001_17592_1 lane1_3600STDY6183856_TCATCCTA_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183857_TGCTGATA_L001_17592_1 lane1_3600STDY6183858_TAGACGGA_L001_17592_1 
#>                                      "0232"                                       "033" 
#> lane1_3600STDY6183859_TGTGAAGA_L001_17592_1 lane1_3600STDY6183860_TCTCTTCA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183861_TTGTTCCA_L001_17592_1 lane1_3600STDY6183862_TGAAGCCA_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183863_TACCACCA_L001_17592_1 lane1_3600STDY6183864_TGCGTGAA_L001_17592_1 
#>                                       "033"                                      "0232" 
#> lane1_3600STDY6183865_GGTGAGTT_L001_17592_1 lane1_3600STDY6183866_GATCTCTT_L001_17592_1 
#>                                      "0231"                                       "031" 
#> lane1_3600STDY6183867_GTGTCCTT_L001_17592_1 lane1_3600STDY6183868_GACGGATT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183869_GCAACATT_L001_17592_1 lane1_3600STDY6183870_GGTCGTGT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183871_GAATCTGT_L001_17592_1 lane1_3600STDY6183872_GTACATCT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183873_GAGGTGCT_L001_17592_1 lane1_3600STDY6183874_GCATGGCT_L001_17592_1 
#>                                       "031"                                      "0231" 
#> lane1_3600STDY6183875_GTTAGCCT_L001_17592_1 lane1_3600STDY6183876_GTCGCTAT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183877_GGAATGAT_L001_17592_1 lane1_3600STDY6183878_GAGCCAAT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183879_GCTCCTTG_L001_17592_1 lane1_3600STDY6183880_GTAAGGTG_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183881_GAGGATGG_L001_17592_1 lane1_3600STDY6183882_GTTGTCGG_L001_17592_1 
#>                                      "0232"                                      "0231" 
#> lane1_3600STDY6183883_GGATTAGG_L001_17592_1 lane1_3600STDY6183884_GATAGAGG_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6183885_GTGTGTCG_L001_17592_1 lane1_3600STDY6183886_GCAATCCG_L001_17592_1 
#>                                      "0232"                                      "0222" 
#> lane1_3600STDY6183887_GACCTTAG_L001_17592_1 lane1_3600STDY6183888_GCCTGTTC_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6183889_GCACTGTC_L001_17592_1 lane1_3600STDY6183890_GCTAACTC_L001_17592_1 
#>                                      "0232"                                       "033" 
#> lane1_3600STDY6183891_GATTCATC_L001_17592_1 lane1_3600STDY6183892_GTCTTGGC_L001_17592_1 
#>                                      "0231"                                       "033" 
#> lane1_3600STDY6183893_GTAGAAGC_L001_17592_1 lane1_3600STDY6183894_GATGGTCC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183895_GTGCTACC_L001_17592_1 lane1_3600STDY6183896_GCGATTAC_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183897_GGTTGGAC_L001_17592_1 lane1_3600STDY6183898_GGCACAAC_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6183899_GACACTTA_L001_17592_1 lane1_3600STDY6183900_GTGCAGTA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183901_GGAGTCTA_L001_17592_1 lane1_3600STDY6183902_GCTATGGA_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183903_GAGTGCGA_L001_17592_1 lane1_3600STDY6183904_GTAACCGA_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183905_GGCAAGCA_L001_17592_1 lane1_3600STDY6183906_GCCTTACA_L001_17592_1 
#>                                      "0232"                                       "033" 
#> lane1_3600STDY6183907_GAACGACA_L001_17592_1 lane1_3600STDY6183908_GCAGGTAA_L001_17592_1 
#>                                       "033"                                      "0232" 
#> lane1_3600STDY6183909_GCGTCGAA_L001_17592_1 lane1_3600STDY6183910_CGTTCGGT_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6183911_CACCAGGT_L001_17592_1 lane1_3600STDY6183912_CTGCGAGT_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6183913_CCGTATCT_L001_17592_1 lane1_3600STDY6183914_CGCTTCCT_L001_17592_1 
#>                                      "0232"                                      "0231" 
#> lane1_3600STDY6183915_CAAGACCT_L001_17592_1 lane1_3600STDY6183916_CACACACT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183917_CCTAGTAT_L001_17592_1 lane1_3600STDY6183918_CCACCGAT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183919_CTTCACAT_L001_17592_1 lane1_3600STDY6183920_CTATCATG_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183921_CATGAATG_L001_17592_1 lane1_3600STDY6183922_CCACTTGG_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183923_CTGTACGG_L001_17592_1 lane1_3600STDY6183924_CTAGATAG_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183925_CACTCGAG_L001_17592_1 lane1_3600STDY6183926_CCGACAAG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183927_CTTGCTTC_L001_17592_1 lane1_3600STDY6183928_CATAGGTC_L001_17592_1 
#>                                      "0232"                                      "0212" 
#> lane1_3600STDY6183929_CACATTGC_L001_17592_1 lane1_3600STDY6183930_CGCTAAGC_L001_17592_1 
#>                                      "0232"                                       "033" 
#> lane1_3600STDY6183931_CAACCTCC_L001_17592_1 lane1_3600STDY6183932_CAGCTGAC_L001_17592_1 
#>                                       "033"                                      "0232" 
#> lane1_3600STDY6183933_CTCAAGAC_L001_17592_1 lane1_3600STDY6183934_CGTGTCAC_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6183935_CCATGCAC_L001_17592_1 lane1_3600STDY6183936_CGTTACTA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183937_CAAGTAGA_L001_17592_1 lane1_3600STDY6183938_CTCTCTCA_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183939_CGACTGCA_L001_17592_1 lane1_3600STDY6183940_CCTGAGCA_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183941_CAGGCTAA_L001_17592_1 lane1_3600STDY6183942_CGGAGGAA_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183943_AGGAGATT_L001_17592_1 lane1_3600STDY6183944_AGGCAGCT_L001_17592_1 
#>                                       "031"                                      "0213" 
#> lane1_3600STDY6183945_ACGTTCAT_L001_17592_1 lane1_3600STDY6183946_AACGTGTG_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183947_AGACCGTG_L001_17592_1 lane1_3600STDY6183948_ACCTCTGG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183949_ATCCTAGG_L001_17592_1 lane1_3600STDY6183950_ATCAACCG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183951_AGGTCACG_L001_17592_1 lane1_3600STDY6183952_ACTGTTAG_L001_17592_1 
#>                                       "031"                                      "0221" 
#> lane1_3600STDY6183953_AAGAGTAG_L001_17592_1 lane1_3600STDY6183954_ATTCGGAG_L001_17592_1 
#>                                      "0231"                                       "031" 
#> lane1_3600STDY6183955_ACGCAATC_L001_17592_1 lane1_3600STDY6183956_ACAAGTGC_L001_17592_1 
#>                                       "033"                                      "0232" 
#> lane1_3600STDY6183957_ATGGATCC_L001_17592_1 lane1_3600STDY6183958_AGAGGACC_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6183959_ATCTCCAC_L001_17592_1 lane1_3600STDY6183960_ATTGGCTA_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6183961_AATCCTGA_L001_17592_1 lane1_3600STDY6183962_AGGATTCA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183963_AACTGGCA_L001_17592_1 lane1_3600STDY6183964_ACAACGCA_L001_17592_1 
#>                                       "033"                                      "0223" 
#> lane1_3600STDY6183965_CGGAAACA_L001_17592_1 lane1_3600STDY6183966_AATGAATT_L001_17592_1 
#>                                      "0222"                                       "033" 
#> lane1_3600STDY6183967_TAGGACCC_L001_17592_1 lane1_3600STDY6183968_TCTCAGTG_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183969_CATGGGAA_L001_17592_1 lane1_3600STDY6183970_CCTAAGAT_L001_17592_1 
#>                                       "031"                                      "0232" 
#> lane1_3600STDY6183971_CTCAGATA_L001_17592_1 lane1_3600STDY6183972_CCCATAGG_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183973_GCTATGAC_L001_17592_1 lane1_3600STDY6183974_GCTGTGAA_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183975_ACCTTCAA_L001_17592_1 lane1_3600STDY6183976_ACAAAGCC_L001_17592_1 
#>                                      "0231"                                      "0211" 
#> lane1_3600STDY6183977_CAAAACCG_L001_17592_1 lane1_3600STDY6183978_GCTGGACA_L001_17592_1 
#>                                      "0232"                                      "0231" 
#> lane1_3600STDY6183979_AAGTCGTA_L001_17592_1 lane1_3600STDY6183980_CATCCGTA_L001_17592_1 
#>                                      "0232"                                      "0231" 
#> lane1_3600STDY6183981_TTGTGTCT_L001_17592_1 lane1_3600STDY6183982_TGCTCTAG_L001_17592_1 
#>                                      "0231"                                      "0232" 
#> lane1_3600STDY6183983_ACCCAACA_L001_17592_1 lane1_3600STDY6183984_CGATCTGA_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6183985_GTTCCACG_L001_17592_1 lane1_3600STDY6183986_ACTCTTTC_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6183987_TATTGGAG_L001_17592_1 lane1_3600STDY6183988_TAAACATA_L001_17592_1 
#>                                      "0231"                                      "0221" 
#> lane1_3600STDY6183989_GTAAGATA_L001_17592_1 lane1_3600STDY6183990_TACCGCAA_L001_17592_1 
#>                                      "0221"                                       "031" 
#> lane1_3600STDY6183991_TATCTCCT_L001_17592_1 lane1_3600STDY6183992_TGTCATCT_L001_17592_1 
#>                                       "031"                                      "0231" 
#> lane1_3600STDY6183993_ATAGCTCT_L001_17592_1 lane1_3600STDY6183994_AGTCCAAC_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6183995_TTTGGGCA_L001_17592_1 lane1_3600STDY6183996_TCTGACGC_L001_17592_1 
#>                                       "031"                                      "0231" 
#> lane1_3600STDY6183997_TGTCGACT_L001_17592_1 lane1_3600STDY6183998_GTCACGTA_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6183999_TTGAGCGA_L001_17592_1 lane1_3600STDY6184000_GAGACATA_L001_17592_1 
#>                                      "0231"                                       "031" 
#> lane1_3600STDY6184001_GTCAAGCT_L001_17592_1 lane1_3600STDY6184002_AGCAAGTT_L001_17592_1 
#>                                      "0221"                                       "031" 
#> lane1_3600STDY6184003_GACGCTCA_L001_17592_1 lane1_3600STDY6184004_ACGGCAGC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184005_AGAACTGA_L001_17592_1 lane1_3600STDY6184006_CGCCTTTG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184007_TAAGGTCA_L001_17592_1 lane1_3600STDY6184008_ACGTTGGC_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184009_CCAGCTTA_L001_17592_1 lane1_3600STDY6184010_GAATCCTA_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184011_ACTTCGTA_L001_17592_1 lane1_3600STDY6184012_TAGTCGGT_L001_17592_1 
#>                                      "0223"                                       "031" 
#> lane1_3600STDY6184013_CGCACGAG_L001_17592_1 lane1_3600STDY6184014_ACGTACTA_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6184015_AGCGCCAA_L001_17592_1 lane1_3600STDY6184016_GCCTGCCC_L001_17592_1 
#>                                       "031"                                      "0231" 
#> lane1_3600STDY6184017_AGGACGAT_L001_17592_1 lane1_3600STDY6184018_CTTGACCG_L001_17592_1 
#>                                       "031"                                      "0231" 
#> lane1_3600STDY6184019_AGGTCTAA_L001_17592_1 lane1_3600STDY6184020_CGAGATCC_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6184021_ATTAGCGG_L001_17592_1 lane1_3600STDY6184022_GCGCTGAT_L001_17592_1 
#>                                       "031"                                      "0231" 
#> lane1_3600STDY6184023_TGCTGAAC_L001_17592_1 lane1_3600STDY6184024_GAGGGCAG_L001_17592_1 
#>                                      "0221"                                       "031" 
#> lane1_3600STDY6184025_GTTTTCAC_L001_17592_1 lane1_3600STDY6184026_GAGATGCC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184027_TTGAGAAG_L001_17592_1 lane1_3600STDY6184028_GCATCCGG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184029_GTCACCAG_L001_17592_1 lane1_3600STDY6184030_GAGGTCGC_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184031_AAGGGGTA_L001_17592_1 lane1_3600STDY6184032_TTTTACGT_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184033_TTCCTACA_L001_17592_1 lane1_3600STDY6184034_AGTGTAGT_L001_17592_1 
#>                                       "031"                                      "0231" 
#> lane1_3600STDY6184035_GTGGCCAA_L001_17592_1 lane1_3600STDY6184036_AAATACTC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184037_CACCCGTC_L001_17592_1 lane1_3600STDY6184038_TCGTGGTT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184039_ACTTGGGG_L001_17592_1 lane1_3600STDY6184040_GGCTGCTT_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6184041_CAGGGTCG_L001_17592_1 lane1_3600STDY6184042_CTCGTCGA_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6184043_TCTACAGT_L001_17592_1 lane1_3600STDY6184044_CTTCTAGA_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6184045_AACGGCTT_L001_17592_1 lane1_3600STDY6184046_ATAAGACT_L001_17592_1 
#>                                       "031"                                      "0231" 
#> lane1_3600STDY6184047_GTTTTTCG_L001_17592_1 lane1_3600STDY6184048_ATTGGTAT_L001_17592_1 
#>                                      "0231"                                       "031" 
#> lane1_3600STDY6184049_CGCCAGTA_L001_17592_1 lane1_3600STDY6184050_AAGCCGAA_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184051_TGACCCAC_L001_17592_1 lane1_3600STDY6184052_ATTGCACA_L001_17592_1 
#>                                      "0231"                                       "031" 
#> lane1_3600STDY6184053_CTTTTGAT_L001_17592_1 lane1_3600STDY6184054_TAGCGAGA_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184055_TTCGCAGG_L001_17592_1 lane1_3600STDY6184056_TAGTTATT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184057_TCCTCCGA_L001_17592_1 lane1_3600STDY6184058_GCGGGTCT_L001_17592_1 
#>                                       "031"                                      "0231" 
#> lane1_3600STDY6184059_GATTCTAT_L001_17592_1 lane1_3600STDY6184060_ATGCAAAG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184061_GTCTGAGG_L001_17592_1 lane1_3600STDY6184062_TCTGGCGA_L001_17592_1 
#>                                      "0231"                                      "0232" 
#> lane1_3600STDY6184063_AATTTGCG_L001_17592_1 lane1_3600STDY6184064_TGGGTTGG_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6184065_AGTTGAAA_L001_17592_1 lane1_3600STDY6184066_GACCGGAA_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6184067_GATCGAAC_L001_17592_1 lane1_3600STDY6184068_GTATAGGG_L001_17592_1 
#>                                      "0222"                                      "0222" 
#> lane1_3600STDY6184069_GGTAAGAG_L001_17592_1 lane1_3600STDY6184070_AGTCCGAT_L001_17592_1 
#>                                      "0342"                                      "0232" 
#> lane1_3600STDY6184071_ATACAGGC_L001_17592_1 lane1_3600STDY6184072_TGAGACTC_L001_17592_1 
#>                                      "0232"                                       "033" 
#> lane1_3600STDY6184073_ACTCAGGA_L001_17592_1 lane1_3600STDY6184074_GTGTCTGA_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184075_CTTGAATC_L001_17592_1 lane1_3600STDY6184076_CCGCATGA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184077_AAGTAACA_L001_17592_1 lane1_3600STDY6184078_GTGGTACT_L001_17592_1 
#>                                       "033"                                      "0232" 
#> lane1_3600STDY6184079_AGCTGTGC_L001_17592_1 lane1_3600STDY6184080_TTACCTTC_L001_17592_1 
#>                                      "0222"                                       "033" 
#> lane1_3600STDY6184081_TCCGGGTA_L001_17592_1 lane1_3600STDY6184082_CTACGTAA_L001_17592_1 
#>                                      "0231"                                      "0232" 
#> lane1_3600STDY6184083_TCGGACCG_L001_17592_1 lane1_3600STDY6184084_ATGCGTCG_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184085_TTCTTAGC_L001_17592_1 lane1_3600STDY6184086_TGAGTAAG_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6184087_AAGTGATA_L001_17592_1 lane1_3600STDY6184088_TCGATGCG_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6184089_TATTCTGG_L001_17592_1 lane1_3600STDY6184090_AGCCGTGA_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6184091_AAGCCTTC_L001_17592_1 lane1_3600STDY6184092_AGGTATCC_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6184093_AGGATCTC_L001_17592_1 lane1_3600STDY6184094_CTGTTTGA_L001_17592_1 
#>                                       "033"                                      "0232" 
#> lane1_3600STDY6184095_GGAATTTC_L001_17592_1 lane1_3600STDY6184096_TTGGAGCA_L001_17592_1 
#>                                      "0231"                                       "031" 
#> lane1_3600STDY6184097_AAGGTCTG_L001_17592_1 lane1_3600STDY6184098_AATTAGGC_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184099_AATCGGGT_L001_17592_1 lane1_3600STDY6184100_AGGTAGAC_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184101_CTTATTCC_L001_17592_1 lane1_3600STDY6184102_CAGGCTCT_L001_17592_1 
#>                                       "033"                                      "0232" 
#> lane1_3600STDY6184103_AAAGCACG_L001_17592_1 lane1_3600STDY6184104_GTATACAC_L001_17592_1 
#>                                      "0232"                                      "0231" 
#> lane1_3600STDY6184105_GGACATAT_L001_17592_1 lane1_3600STDY6184106_CGGTTGGG_L001_17592_1 
#>                                      "0222"                                      "0231" 
#> lane1_3600STDY6184107_GTCCGTGA_L001_17592_1 lane1_3600STDY6184108_GCCGAACC_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184109_ACTTTACT_L001_17592_1 lane1_3600STDY6184110_GGGTCCAT_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184111_ATAACTAG_L001_17592_1 lane1_3600STDY6184112_AATAGAGA_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6184113_TCACCATT_L001_17592_1 lane1_3600STDY6184114_CGCCTGAT_L001_17592_1 
#>                                      "0231"                                      "0232" 
#> lane1_3600STDY6184115_GCGTGAAC_L001_17592_1 lane1_3600STDY6184116_TAAGGGTG_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6184117_GGTGTCGA_L001_17592_1 lane1_3600STDY6184118_CCGTTAGG_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184119_TGGCAAAA_L001_17592_1 lane1_3600STDY6184120_CCTACCCG_L001_17592_1 
#>                                      "0231"                                       "031" 
#> lane1_3600STDY6184121_AACAGCGC_L001_17592_1 lane1_3600STDY6184122_TATACATC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184123_AAGCGACT_L001_17592_1 lane1_3600STDY6184124_GAAGCGCA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184125_ACCTCTAC_L001_17592_1 lane1_3600STDY6184126_GATTGCGT_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6184127_GCTGGTTG_L001_17592_1 lane1_3600STDY6184128_ATCGTCCT_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184129_GGACACGG_L001_17592_1 lane1_3600STDY6184130_CGCACCTA_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6184131_CTTCGGCT_L001_17592_1 lane1_3600STDY6184132_CGAATCGA_L001_17592_1 
#>                                       "031"                                      "0222" 
#> lane1_3600STDY6184133_TAACAACT_L001_17592_1 lane1_3600STDY6184134_AGCTCTTT_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6184135_TAATCCCT_L001_17592_1 lane1_3600STDY6184136_AGGACACT_L001_17592_1 
#>                                      "0231"                                      "0232" 
#> lane1_3600STDY6184137_TTACACTA_L001_17592_1 lane1_3600STDY6184138_AAACATCA_L001_17592_1 
#>                                       "033"                                      "0232" 
#> lane1_3600STDY6184139_CCATAGCT_L001_17592_1 lane1_3600STDY6184140_GTTATGGC_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6184141_ATCCCCTA_L001_17592_1 lane1_3600STDY6184142_CATACTAC_L001_17592_1 
#>                                      "0232"                                       "033" 
#> lane1_3600STDY6184143_CAATTGTT_L001_17592_1 lane1_3600STDY6184144_AAACCCGT_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6184145_CAGATTTC_L001_17592_1 lane1_3600STDY6184146_GCGTAGGT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184147_GGCATTCG_L001_17592_1 lane1_3600STDY6184148_TGGGGCTT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184149_CTGACTAC_L001_17592_1 lane1_3600STDY6184150_AACTTTTA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184151_AGGGATTC_L001_17592_1 lane1_3600STDY6184152_CCGAGTAG_L001_17592_1 
#>                                      "0231"                                       "033" 
#> lane1_3600STDY6184153_GGGGACTA_L001_17592_1 lane1_3600STDY6184154_GGAGTTGA_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6184155_AGCTCATC_L001_17592_1 lane1_3600STDY6184156_TAATCAAC_L001_17592_1 
#>                                       "031"                                      "0221" 
#> lane1_3600STDY6184157_ACTGGTCG_L001_17592_1 lane1_3600STDY6184158_GACGATTG_L001_17592_1 
#>                                       "031"                                      "0231" 
#> lane1_3600STDY6184159_AGCGATGA_L001_17592_1 lane1_3600STDY6184160_GAAGAGAT_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6184161_CGTATGCA_L001_17592_1 lane1_3600STDY6184162_CACGTGCG_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184163_GCTTAAAC_L001_17592_1 lane1_3600STDY6184164_GTTCCGCA_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6184165_GTATCGTC_L001_17592_1 lane1_3600STDY6184166_GTCCTCAC_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184167_GTACGGAC_L001_17592_1 lane1_3600STDY6184168_CATTTTGC_L001_17592_1 
#>                                      "0231"                                       "031" 
#> lane1_3600STDY6184169_TCCTCTCT_L001_17592_1 lane1_3600STDY6184170_AGCAACGA_L001_17592_1 
#>                                      "0341"                                      "0231" 
#> lane1_3600STDY6184171_ACAGAAGA_L001_17592_1 lane1_3600STDY6184172_CGACCCTT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184173_CTGCCTAG_L001_17592_1 lane1_3600STDY6184174_GAGCGCAT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184175_AACTTATC_L001_17592_1 lane1_3600STDY6184176_CCGATGTA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184177_TTACTACC_L001_17592_1 lane1_3600STDY6184178_CAAGGAGC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184179_TGGTTGAC_L001_17592_1 lane1_3600STDY6184180_ACCTGCTG_L001_17592_1 
#>                                       "031"                                      "0221"

show/hide code output

get_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 1489))
#> lane1_3600STDY6077864_ATCACGTT_L001_15986_1 lane1_3600STDY6077865_CGATGTTT_L001_15986_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6077866_TTAGGCAT_L001_15986_1 lane1_3600STDY6077867_TGACCACT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077868_ACAGTGGT_L001_15986_1 lane1_3600STDY6077869_GCCAATGT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077870_CAGATCTG_L001_15986_1 lane1_3600STDY6077871_ACTTGATG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077872_GATCAGCG_L001_15986_1 lane1_3600STDY6077873_TAGCTTGT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077874_GGCTACAG_L001_15986_1 lane1_3600STDY6077875_CTTGTACT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077876_TGGTTGTT_L001_15986_1 lane1_3600STDY6077877_TCTCGGTT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077878_TAAGCGTT_L001_15986_1 lane1_3600STDY6077879_TCCGTCTT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077880_TGTACCTT_L001_15986_1 lane1_3600STDY6077881_TTCTGTGT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077882_TCTGCTGT_L001_15986_1 lane1_3600STDY6077883_TTGGAGGT_L001_15986_1 
#>                                      "0121"                                      "0221" 
#> lane1_3600STDY6077884_TCGAGCGT_L001_15986_1 lane1_3600STDY6077885_TGATACGT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077886_TGCATAGT_L001_15986_1 lane1_3600STDY6077887_TTGACTCT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077888_TGCGATCT_L001_15986_1 lane1_3600STDY6077889_TTCCTGCT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077890_TAGTGACT_L001_15986_1 lane1_3600STDY6077891_TACAGGAT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077892_TCCTCAAT_L001_15986_1 lane1_3600STDY6077893_TGTGGTTG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077894_TAGTCTTG_L001_15986_1 lane1_3600STDY6077895_TTCCATTG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077896_TCGAAGTG_L001_15986_1 lane1_3600STDY6077897_TAACGCTG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077898_TTGGTATG_L001_15986_1 lane1_3600STDY6077899_TGAACTGG_L001_15986_1 
#>                                      "0121"                                      "0221" 
#> lane1_3600STDY6077900_TACTTCGG_L001_15986_1 lane1_3600STDY6077901_TCTCACGG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077902_TCAGGAGG_L001_15986_1 lane1_3600STDY6077903_TAAGTTCG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077904_TCCAGTCG_L001_15986_1 lane1_3600STDY6077905_TGTATGCG_L001_15986_1 
#>                                      "0221"                                      "0121" 
#> lane1_3600STDY6077906_TCATTGAG_L001_15986_1 lane1_3600STDY6077907_TGGCTCAG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077908_TATGCCAG_L001_15986_1 lane1_3600STDY6077909_TCAGATTC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077910_TACTAGTC_L001_15986_1 lane1_3600STDY6077911_TTCAGCTC_L001_15986_1 
#>                                      "0121"                                      "0221" 
#> lane1_3600STDY6077912_TGTCTATC_L001_15986_1 lane1_3600STDY6077913_TATGTGGC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077914_TTACTCGC_L001_15986_1 lane1_3600STDY6077915_TCGTTAGC_L001_15986_1 
#>                                      "0221"                                      "0121" 
#> lane1_3600STDY6077916_TACCGAGC_L001_15986_1 lane1_3600STDY6077917_TGTTCTCC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077918_TTCGCACC_L001_15986_1 lane1_3600STDY6077919_TTGCGTAC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077920_TCTACGAC_L001_15986_1 lane1_3600STDY6077921_TGACAGAC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077922_TAGAACAC_L001_15986_1 lane1_3600STDY6077923_TCATCCTA_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077924_TGCTGATA_L001_15986_1 lane1_3600STDY6077925_TAGACGGA_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077926_TGTGAAGA_L001_15986_1 lane1_3600STDY6077927_TCTCTTCA_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077928_TTGTTCCA_L001_15986_1 lane1_3600STDY6077929_TGAAGCCA_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077930_TACCACCA_L001_15986_1 lane1_3600STDY6077931_TGCGTGAA_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077932_GGTGAGTT_L001_15986_1 lane1_3600STDY6077933_GATCTCTT_L001_15986_1 
#>                                      "0121"                                      "0221" 
#> lane1_3600STDY6077934_GTGTCCTT_L001_15986_1 lane1_3600STDY6077935_GACGGATT_L001_15986_1 
#>                                      "0221"                                      "0121" 
#> lane1_3600STDY6077936_GCAACATT_L001_15986_1 lane1_3600STDY6077937_GGTCGTGT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077938_GAATCTGT_L001_15986_1 lane1_3600STDY6077939_GTACATCT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077940_GAGGTGCT_L001_15986_1 lane1_3600STDY6077941_GCATGGCT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077942_GTTAGCCT_L001_15986_1 lane1_3600STDY6077943_GTCGCTAT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077944_GGAATGAT_L001_15986_1 lane1_3600STDY6077945_GAGCCAAT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077946_GCTCCTTG_L001_15986_1 lane1_3600STDY6077947_GTAAGGTG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077948_GAGGATGG_L001_15986_1 lane1_3600STDY6077949_GTTGTCGG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077950_GGATTAGG_L001_15986_1 lane1_3600STDY6077951_GATAGAGG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077952_GTGTGTCG_L001_15986_1 lane1_3600STDY6077953_GCAATCCG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077954_GACCTTAG_L001_15986_1 lane1_3600STDY6077955_GCCTGTTC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077956_GCACTGTC_L001_15986_1 lane1_3600STDY6077957_GCTAACTC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077958_GATTCATC_L001_15986_1 lane1_3600STDY6077959_GTCTTGGC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane3_3600STDY6077960_ATCACGTT_L003_15987_1 lane3_3600STDY6077961_CGATGTTT_L003_15987_1 
#>                                      "0221"                                      "0221" 
#> lane3_3600STDY6077962_TTAGGCAT_L003_15987_1 lane3_3600STDY6077963_TGACCACT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077964_ACAGTGGT_L003_15987_1 lane3_3600STDY6077965_GCCAATGT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077966_CAGATCTG_L003_15987_1 lane3_3600STDY6077967_ACTTGATG_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077968_GATCAGCG_L003_15987_1 lane3_3600STDY6077969_TAGCTTGT_L003_15987_1 
#>                                      "0122"                                     "01233" 
#> lane3_3600STDY6077970_GGCTACAG_L003_15987_1 lane3_3600STDY6077971_CTTGTACT_L003_15987_1 
#>                                     "01232"                                     "01232" 
#> lane3_3600STDY6077972_TGGTTGTT_L003_15987_1 lane3_3600STDY6077973_TCTCGGTT_L003_15987_1 
#>                                     "01233"                                      "0122" 
#> lane3_3600STDY6077974_TAAGCGTT_L003_15987_1 lane3_3600STDY6077975_TCCGTCTT_L003_15987_1 
#>                                     "01231"                                     "01231" 
#> lane3_3600STDY6077976_TGTACCTT_L003_15987_1 lane3_3600STDY6077977_TTCTGTGT_L003_15987_1 
#>                                     "01232"                                      "0122" 
#> lane3_3600STDY6077978_TCTGCTGT_L003_15987_1 lane3_3600STDY6077979_TTGGAGGT_L003_15987_1 
#>                                      "0224"                                      "0122" 
#> lane3_3600STDY6077980_TCGAGCGT_L003_15987_1 lane3_3600STDY6077981_TGATACGT_L003_15987_1 
#>                                      "0122"                                     "01233" 
#> lane3_3600STDY6077982_TGCATAGT_L003_15987_1 lane3_3600STDY6077983_TTGACTCT_L003_15987_1 
#>                                      "0122"                                     "01233" 
#> lane3_3600STDY6077984_TGCGATCT_L003_15987_1 lane3_3600STDY6077985_TTCCTGCT_L003_15987_1 
#>                                     "01233"                                      "0122" 
#> lane3_3600STDY6077986_TAGTGACT_L003_15987_1 lane3_3600STDY6077987_TACAGGAT_L003_15987_1 
#>                                     "01233"                                     "01231" 
#> lane3_3600STDY6077988_TCCTCAAT_L003_15987_1 lane3_3600STDY6077989_TGTGGTTG_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077990_TAGTCTTG_L003_15987_1 lane3_3600STDY6077991_TTCCATTG_L003_15987_1 
#>                                      "0122"                                     "01233" 
#> lane3_3600STDY6077992_TCGAAGTG_L003_15987_1 lane3_3600STDY6077993_TAACGCTG_L003_15987_1 
#>                                      "0122"                                     "01231" 
#> lane3_3600STDY6077994_TTGGTATG_L003_15987_1 lane3_3600STDY6077995_TGAACTGG_L003_15987_1 
#>                                     "01231"                                     "01231" 
#> lane3_3600STDY6077996_TACTTCGG_L003_15987_1 lane3_3600STDY6077997_TCTCACGG_L003_15987_1 
#>                                      "0122"                                      "0224" 
#> lane3_3600STDY6077998_TCAGGAGG_L003_15987_1 lane3_3600STDY6077999_TAAGTTCG_L003_15987_1 
#>                                     "01231"                                     "01231" 
#> lane3_3600STDY6078000_TCCAGTCG_L003_15987_1 lane3_3600STDY6078001_TGTATGCG_L003_15987_1 
#>                                      "0122"                                      "0221" 
#> lane3_3600STDY6078002_TCATTGAG_L003_15987_1 lane3_3600STDY6078003_TGGCTCAG_L003_15987_1 
#>                                      "0342"                                      "0122" 
#> lane3_3600STDY6078004_TATGCCAG_L003_15987_1 lane3_3600STDY6078005_TCAGATTC_L003_15987_1 
#>                                      "0122"                                     "01231" 
#> lane3_3600STDY6078006_TACTAGTC_L003_15987_1 lane3_3600STDY6078007_TTCAGCTC_L003_15987_1 
#>                                     "01231"                                      "0122" 
#> lane3_3600STDY6078008_TGTCTATC_L003_15987_1 lane3_3600STDY6078009_TATGTGGC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078010_TTACTCGC_L003_15987_1 lane3_3600STDY6078011_TCGTTAGC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078012_TACCGAGC_L003_15987_1 lane3_3600STDY6078013_TGTTCTCC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078014_TTCGCACC_L003_15987_1 lane3_3600STDY6078015_TTGCGTAC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078016_TCTACGAC_L003_15987_1 lane3_3600STDY6078017_TGACAGAC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078018_TAGAACAC_L003_15987_1 lane3_3600STDY6078019_TCATCCTA_L003_15987_1 
#>                                     "01233"                                     "01233" 
#> lane3_3600STDY6078020_TGCTGATA_L003_15987_1 lane3_3600STDY6078021_TAGACGGA_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078022_TGTGAAGA_L003_15987_1 lane3_3600STDY6078023_TCTCTTCA_L003_15987_1 
#>                                     "01231"                                     "01233" 
#> lane3_3600STDY6078024_TTGTTCCA_L003_15987_1 lane3_3600STDY6078025_TGAAGCCA_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078026_TACCACCA_L003_15987_1 lane3_3600STDY6078027_TGCGTGAA_L003_15987_1 
#>                                     "01233"                                      "0221" 
#> lane3_3600STDY6078028_GGTGAGTT_L003_15987_1 lane3_3600STDY6078029_GATCTCTT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078030_GTGTCCTT_L003_15987_1 lane3_3600STDY6078031_GACGGATT_L003_15987_1 
#>                                     "01231"                                     "01232" 
#> lane3_3600STDY6078032_GCAACATT_L003_15987_1 lane3_3600STDY6078033_GGTCGTGT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078034_GAATCTGT_L003_15987_1 lane3_3600STDY6078035_GTACATCT_L003_15987_1 
#>                                      "0122"                                     "01233" 
#> lane3_3600STDY6078036_GAGGTGCT_L003_15987_1 lane3_3600STDY6078037_GCATGGCT_L003_15987_1 
#>                                     "01231"                                      "0122" 
#> lane3_3600STDY6078038_GTTAGCCT_L003_15987_1 lane3_3600STDY6078039_GTCGCTAT_L003_15987_1 
#>                                     "01233"                                     "01233" 
#> lane3_3600STDY6078040_GGAATGAT_L003_15987_1 lane3_3600STDY6078041_GAGCCAAT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078042_GCTCCTTG_L003_15987_1 lane3_3600STDY6078043_GTAAGGTG_L003_15987_1 
#>                                     "01231"                                     "01232" 
#> lane3_3600STDY6078044_GAGGATGG_L003_15987_1 lane3_3600STDY6078045_GTTGTCGG_L003_15987_1 
#>                                     "01232"                                     "01232" 
#> lane3_3600STDY6078046_GGATTAGG_L003_15987_1 lane3_3600STDY6078047_GATAGAGG_L003_15987_1 
#>                                     "01232"                                     "01232" 
#> lane3_3600STDY6078048_GTGTGTCG_L003_15987_1 lane3_3600STDY6078049_GCAATCCG_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078050_GACCTTAG_L003_15987_1 lane3_3600STDY6078051_GCCTGTTC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078052_GCACTGTC_L003_15987_1 lane3_3600STDY6078053_GCTAACTC_L003_15987_1 
#>                                      "0122"                                     "01232" 
#> lane3_3600STDY6078054_GATTCATC_L003_15987_1 lane3_3600STDY6078055_GTCTTGGC_L003_15987_1 
#>                                     "01232"                                     "01232" 
#> lane1_3600STDY6167693_ATCACGTT_L001_17236_1 lane1_3600STDY6167694_CGATGTTT_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167695_TTAGGCAT_L001_17236_1 lane1_3600STDY6167696_TGACCACT_L001_17236_1 
#>                                      "0342"                                      "0112" 
#> lane1_3600STDY6167697_ACAGTGGT_L001_17236_1 lane1_3600STDY6167698_GCCAATGT_L001_17236_1 
#>                                      "0224"                                      "0113" 
#> lane1_3600STDY6167699_CAGATCTG_L001_17236_1 lane1_3600STDY6167700_ACTTGATG_L001_17236_1 
#>                                      "0113"                                      "0221" 
#> lane1_3600STDY6167701_GATCAGCG_L001_17236_1 lane1_3600STDY6167702_TAGCTTGT_L001_17236_1 
#>                                      "0113"                                       "014" 
#> lane1_3600STDY6167703_GGCTACAG_L001_17236_1 lane1_3600STDY6167704_CTTGTACT_L001_17236_1 
#>                                       "014"                                      "0342" 
#> lane1_3600STDY6167705_TGGTTGTT_L001_17236_1 lane1_3600STDY6167706_TCTCGGTT_L001_17236_1 
#>                                       "014"                                      "0221" 
#> lane1_3600STDY6167707_TAAGCGTT_L001_17236_1 lane1_3600STDY6167708_TCCGTCTT_L001_17236_1 
#>                                      "0221"                                       "013" 
#> lane1_3600STDY6167709_TGTACCTT_L001_17236_1 lane1_3600STDY6167710_TTCTGTGT_L001_17236_1 
#>                                      "0113"                                      "0221" 
#> lane1_3600STDY6167711_TCTGCTGT_L001_17236_1 lane1_3600STDY6167712_TTGGAGGT_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167713_TCGAGCGT_L001_17236_1 lane1_3600STDY6167714_TGATACGT_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167715_TGCATAGT_L001_17236_1 lane1_3600STDY6167716_TTGACTCT_L001_17236_1 
#>                                      "0113"                                       "013" 
#> lane1_3600STDY6167717_TGCGATCT_L001_17236_1 lane1_3600STDY6167718_TTCCTGCT_L001_17236_1 
#>                                       "013"                                      "0221" 
#> lane1_3600STDY6167719_TAGTGACT_L001_17236_1 lane1_3600STDY6167720_TACAGGAT_L001_17236_1 
#>                                      "0342"                                      "0342" 
#> lane1_3600STDY6167721_TCCTCAAT_L001_17236_1 lane1_3600STDY6167722_TGTGGTTG_L001_17236_1 
#>                                      "0342"                                      "0113" 
#> lane1_3600STDY6167723_TAGTCTTG_L001_17236_1 lane1_3600STDY6167724_TTCCATTG_L001_17236_1 
#>                                      "0113"                                      "0221" 
#> lane1_3600STDY6167725_TCGAAGTG_L001_17236_1 lane1_3600STDY6167726_TAACGCTG_L001_17236_1 
#>                                      "0113"                                       "014" 
#> lane1_3600STDY6167727_TTGGTATG_L001_17236_1 lane1_3600STDY6167728_TGAACTGG_L001_17236_1 
#>                                       "013"                                      "0121" 
#> lane1_3600STDY6167729_TACTTCGG_L001_17236_1 lane1_3600STDY6167730_TCTCACGG_L001_17236_1 
#>                                      "0111"                                       "014" 
#> lane1_3600STDY6167731_TCAGGAGG_L001_17236_1 lane1_3600STDY6167732_TAAGTTCG_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6167733_TCCAGTCG_L001_17236_1 lane1_3600STDY6167734_TGTATGCG_L001_17236_1 
#>                                      "0113"                                      "0221" 
#> lane1_3600STDY6167735_TCATTGAG_L001_17236_1 lane1_3600STDY6167736_TGGCTCAG_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167737_TATGCCAG_L001_17236_1 lane1_3600STDY6167738_TCAGATTC_L001_17236_1 
#>                                      "0113"                                       "013" 
#> lane1_3600STDY6167739_TACTAGTC_L001_17236_1 lane1_3600STDY6167740_TTCAGCTC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167741_TGTCTATC_L001_17236_1 lane1_3600STDY6167742_TATGTGGC_L001_17236_1 
#>                                      "0113"                                       "013" 
#> lane1_3600STDY6167743_TTACTCGC_L001_17236_1 lane1_3600STDY6167744_TCGTTAGC_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167745_TACCGAGC_L001_17236_1 lane1_3600STDY6167746_TGTTCTCC_L001_17236_1 
#>                                      "0342"                                      "0111" 
#> lane1_3600STDY6167747_TTCGCACC_L001_17236_1 lane1_3600STDY6167748_TTGCGTAC_L001_17236_1 
#>                                      "0342"                                      "0111" 
#> lane1_3600STDY6167749_TCTACGAC_L001_17236_1 lane1_3600STDY6167750_TGACAGAC_L001_17236_1 
#>                                      "0111"                                      "0113" 
#> lane1_3600STDY6167751_TAGAACAC_L001_17236_1 lane1_3600STDY6167752_TCATCCTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167753_TGCTGATA_L001_17236_1 lane1_3600STDY6167754_TAGACGGA_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167755_TGTGAAGA_L001_17236_1 lane1_3600STDY6167756_TCTCTTCA_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6167757_TTGTTCCA_L001_17236_1 lane1_3600STDY6167758_TGAAGCCA_L001_17236_1 
#>                                      "0111"                                      "0221" 
#> lane1_3600STDY6167759_TACCACCA_L001_17236_1 lane1_3600STDY6167760_TGCGTGAA_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6167761_GGTGAGTT_L001_17236_1 lane1_3600STDY6167762_GATCTCTT_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167763_GTGTCCTT_L001_17236_1 lane1_3600STDY6167764_GACGGATT_L001_17236_1 
#>                                      "0112"                                       "013" 
#> lane1_3600STDY6167765_GCAACATT_L001_17236_1 lane1_3600STDY6167766_GGTCGTGT_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6167767_GAATCTGT_L001_17236_1 lane1_3600STDY6167768_GTACATCT_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167769_GAGGTGCT_L001_17236_1 lane1_3600STDY6167770_GCATGGCT_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167771_GTTAGCCT_L001_17236_1 lane1_3600STDY6167772_GTCGCTAT_L001_17236_1 
#>                                      "0112"                                      "0111" 
#> lane1_3600STDY6167773_GGAATGAT_L001_17236_1 lane1_3600STDY6167774_GAGCCAAT_L001_17236_1 
#>                                      "0112"                                      "0113" 
#> lane1_3600STDY6167775_GCTCCTTG_L001_17236_1 lane1_3600STDY6167776_GTAAGGTG_L001_17236_1 
#>                                      "0111"                                      "0221" 
#> lane1_3600STDY6167777_GAGGATGG_L001_17236_1 lane1_3600STDY6167778_GTTGTCGG_L001_17236_1 
#>                                      "0112"                                      "0221" 
#> lane1_3600STDY6167779_GGATTAGG_L001_17236_1 lane1_3600STDY6167780_GATAGAGG_L001_17236_1 
#>                                      "0113"                                      "0112" 
#> lane1_3600STDY6167781_GTGTGTCG_L001_17236_1 lane1_3600STDY6167782_GCAATCCG_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167783_GACCTTAG_L001_17236_1 lane1_3600STDY6167784_GCCTGTTC_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167785_GCACTGTC_L001_17236_1 lane1_3600STDY6167786_GCTAACTC_L001_17236_1 
#>                                      "0112"                                      "0111" 
#> lane1_3600STDY6167787_GATTCATC_L001_17236_1 lane1_3600STDY6167788_GTCTTGGC_L001_17236_1 
#>                                      "0112"                                      "0221" 
#> lane1_3600STDY6167789_GTAGAAGC_L001_17236_1 lane1_3600STDY6167790_GATGGTCC_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6167791_GTGCTACC_L001_17236_1 lane1_3600STDY6167792_GCGATTAC_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167793_GGTTGGAC_L001_17236_1 lane1_3600STDY6167794_GGCACAAC_L001_17236_1 
#>                                      "0112"                                      "0111" 
#> lane1_3600STDY6167795_GACACTTA_L001_17236_1 lane1_3600STDY6167796_GTGCAGTA_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167797_GGAGTCTA_L001_17236_1 lane1_3600STDY6167798_GCTATGGA_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6167799_GAGTGCGA_L001_17236_1 lane1_3600STDY6167800_GTAACCGA_L001_17236_1 
#>                                      "0342"                                      "0111" 
#> lane1_3600STDY6167801_GGCAAGCA_L001_17236_1 lane1_3600STDY6167802_GCCTTACA_L001_17236_1 
#>                                      "0112"                                       "013" 
#> lane1_3600STDY6167803_GAACGACA_L001_17236_1 lane1_3600STDY6167804_GCAGGTAA_L001_17236_1 
#>                                       "013"                                      "0111" 
#> lane1_3600STDY6167805_GCGTCGAA_L001_17236_1 lane1_3600STDY6167806_CGTTCGGT_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6167807_CACCAGGT_L001_17236_1 lane1_3600STDY6167808_CTGCGAGT_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6167809_CCGTATCT_L001_17236_1 lane1_3600STDY6167810_CGCTTCCT_L001_17236_1 
#>                                      "0111"                                      "0222" 
#> lane1_3600STDY6167811_CAAGACCT_L001_17236_1 lane1_3600STDY6167812_CACACACT_L001_17236_1 
#>                                      "0111"                                       "014" 
#> lane1_3600STDY6167813_CCTAGTAT_L001_17236_1 lane1_3600STDY6167814_CCACCGAT_L001_17236_1 
#>                                      "0221"                                      "0112" 
#> lane1_3600STDY6167815_CTTCACAT_L001_17236_1 lane1_3600STDY6167816_CTATCATG_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167817_CATGAATG_L001_17236_1 lane1_3600STDY6167818_CCACTTGG_L001_17236_1 
#>                                      "0342"                                      "0111" 
#> lane1_3600STDY6167819_CTGTACGG_L001_17236_1 lane1_3600STDY6167820_CTAGATAG_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167821_CACTCGAG_L001_17236_1 lane1_3600STDY6167822_CCGACAAG_L001_17236_1 
#>                                      "0342"                                       "013" 
#> lane1_3600STDY6167823_CTTGCTTC_L001_17236_1 lane1_3600STDY6167824_CATAGGTC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167825_CACATTGC_L001_17236_1 lane1_3600STDY6167826_CGCTAAGC_L001_17236_1 
#>                                      "0111"                                       "014" 
#> lane1_3600STDY6167827_CAACCTCC_L001_17236_1 lane1_3600STDY6167828_CAGCTGAC_L001_17236_1 
#>                                       "013"                                      "0111" 
#> lane1_3600STDY6167829_CTCAAGAC_L001_17236_1 lane1_3600STDY6167830_CGTGTCAC_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167831_CCATGCAC_L001_17236_1 lane1_3600STDY6167832_CGTTACTA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167833_CAAGTAGA_L001_17236_1 lane1_3600STDY6167834_CTCTCTCA_L001_17236_1 
#>                                      "0111"                                      "0113" 
#> lane1_3600STDY6167835_CGACTGCA_L001_17236_1 lane1_3600STDY6167836_CCTGAGCA_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6167837_CAGGCTAA_L001_17236_1 lane1_3600STDY6167838_CGGAGGAA_L001_17236_1 
#>                                       "014"                                      "0113" 
#> lane1_3600STDY6167839_AGGAGATT_L001_17236_1 lane1_3600STDY6167840_AGGCAGCT_L001_17236_1 
#>                                       "013"                                      "0111" 
#> lane1_3600STDY6167841_ACGTTCAT_L001_17236_1 lane1_3600STDY6167842_AACGTGTG_L001_17236_1 
#>                                      "0342"                                       "013" 
#> lane1_3600STDY6167843_AGACCGTG_L001_17236_1 lane1_3600STDY6167844_ACCTCTGG_L001_17236_1 
#>                                      "0342"                                      "0221" 
#> lane1_3600STDY6167845_ATCCTAGG_L001_17236_1 lane1_3600STDY6167846_ATCAACCG_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167847_AGGTCACG_L001_17236_1 lane1_3600STDY6167848_ACTGTTAG_L001_17236_1 
#>                                      "0221"                                       "013" 
#> lane1_3600STDY6167849_AAGAGTAG_L001_17236_1 lane1_3600STDY6167850_ATTCGGAG_L001_17236_1 
#>                                       "013"                                       "014" 
#> lane1_3600STDY6167851_ACGCAATC_L001_17236_1 lane1_3600STDY6167852_ACAAGTGC_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167853_ATGGATCC_L001_17236_1 lane1_3600STDY6167854_AGAGGACC_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167855_ATCTCCAC_L001_17236_1 lane1_3600STDY6167856_ATTGGCTA_L001_17236_1 
#>                                      "0111"                                      "0113" 
#> lane1_3600STDY6167857_AATCCTGA_L001_17236_1 lane1_3600STDY6167858_AGGATTCA_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6167859_AACTGGCA_L001_17236_1 lane1_3600STDY6167860_ACAACGCA_L001_17236_1 
#>                                       "013"                                      "0112" 
#> lane1_3600STDY6167861_CGGAAACA_L001_17236_1 lane1_3600STDY6167862_AATGAATT_L001_17236_1 
#>                                      "0221"                                       "014" 
#> lane1_3600STDY6167863_TAGGACCC_L001_17236_1 lane1_3600STDY6167864_TCTCAGTG_L001_17236_1 
#>                                      "0113"                                      "0111" 
#> lane1_3600STDY6167865_CATGGGAA_L001_17236_1 lane1_3600STDY6167866_CCTAAGAT_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167867_CTCAGATA_L001_17236_1 lane1_3600STDY6167868_CCCATAGG_L001_17236_1 
#>                                      "0111"                                       "014" 
#> lane1_3600STDY6167869_GCTATGAC_L001_17236_1 lane1_3600STDY6167870_GCTGTGAA_L001_17236_1 
#>                                      "0111"                                      "0221" 
#> lane1_3600STDY6167871_ACCTTCAA_L001_17236_1 lane1_3600STDY6167872_ACAAAGCC_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6167873_CAAAACCG_L001_17236_1 lane1_3600STDY6167874_GCTGGACA_L001_17236_1 
#>                                      "0221"                                       "014" 
#> lane1_3600STDY6167875_AAGTCGTA_L001_17236_1 lane1_3600STDY6167876_CATCCGTA_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6167877_TTGTGTCT_L001_17236_1 lane1_3600STDY6167878_TGCTCTAG_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6167879_ACCCAACA_L001_17236_1 lane1_3600STDY6167880_CGATCTGA_L001_17236_1 
#>                                      "0221"                                      "0112" 
#> lane1_3600STDY6167881_GTTCCACG_L001_17236_1 lane1_3600STDY6167882_ACTCTTTC_L001_17236_1 
#>                                      "0111"                                       "013" 
#> lane1_3600STDY6167883_TATTGGAG_L001_17236_1 lane1_3600STDY6167884_TAAACATA_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6167885_GTAAGATA_L001_17236_1 lane1_3600STDY6167886_TACCGCAA_L001_17236_1 
#>                                      "0342"                                       "013" 
#> lane1_3600STDY6167887_TATCTCCT_L001_17236_1 lane1_3600STDY6167888_TGTCATCT_L001_17236_1 
#>                                      "0342"                                      "0111" 
#> lane1_3600STDY6167889_ATAGCTCT_L001_17236_1 lane1_3600STDY6167890_AGTCCAAC_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167891_TTTGGGCA_L001_17236_1 lane1_3600STDY6167892_TCTGACGC_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167893_TGTCGACT_L001_17236_1 lane1_3600STDY6167894_GTCACGTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167895_TTGAGCGA_L001_17236_1 lane1_3600STDY6167896_GAGACATA_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167897_GTCAAGCT_L001_17236_1 lane1_3600STDY6167898_AGCAAGTT_L001_17236_1 
#>                                      "0232"                                      "0342" 
#> lane1_3600STDY6167899_GACGCTCA_L001_17236_1 lane1_3600STDY6167900_ACGGCAGC_L001_17236_1 
#>                                      "0112"                                      "0342" 
#> lane1_3600STDY6167901_AGAACTGA_L001_17236_1 lane1_3600STDY6167902_CGCCTTTG_L001_17236_1 
#>                                      "0342"                                      "0112" 
#> lane1_3600STDY6167903_TAAGGTCA_L001_17236_1 lane1_3600STDY6167904_ACGTTGGC_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167905_CCAGCTTA_L001_17236_1 lane1_3600STDY6167906_GAATCCTA_L001_17236_1 
#>                                      "0113"                                      "0111" 
#> lane1_3600STDY6167907_ACTTCGTA_L001_17236_1 lane1_3600STDY6167908_TAGTCGGT_L001_17236_1 
#>                                       "013"                                      "0221" 
#> lane1_3600STDY6167909_CGCACGAG_L001_17236_1 lane1_3600STDY6167910_ACGTACTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167911_AGCGCCAA_L001_17236_1 lane1_3600STDY6167912_GCCTGCCC_L001_17236_1 
#>                                      "0113"                                      "0113" 
#> lane1_3600STDY6167913_AGGACGAT_L001_17236_1 lane1_3600STDY6167914_CTTGACCG_L001_17236_1 
#>                                      "0111"                                      "0113" 
#> lane1_3600STDY6167915_AGGTCTAA_L001_17236_1 lane1_3600STDY6167916_CGAGATCC_L001_17236_1 
#>                                       "013"                                      "0111" 
#> lane1_3600STDY6167917_ATTAGCGG_L001_17236_1 lane1_3600STDY6167918_GCGCTGAT_L001_17236_1 
#>                                      "0111"                                      "0221" 
#> lane1_3600STDY6167919_TGCTGAAC_L001_17236_1 lane1_3600STDY6167920_GAGGGCAG_L001_17236_1 
#>                                       "014"                                      "0221" 
#> lane1_3600STDY6167921_GTTTTCAC_L001_17236_1 lane1_3600STDY6167922_GAGATGCC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167923_TTGAGAAG_L001_17236_1 lane1_3600STDY6167924_GCATCCGG_L001_17236_1 
#>                                       "013"                                      "0112" 
#> lane1_3600STDY6167925_GTCACCAG_L001_17236_1 lane1_3600STDY6167926_GAGGTCGC_L001_17236_1 
#>                                      "0112"                                      "0342" 
#> lane1_3600STDY6167927_AAGGGGTA_L001_17236_1 lane1_3600STDY6167928_TTTTACGT_L001_17236_1 
#>                                      "0113"                                      "0112" 
#> lane1_3600STDY6167929_TTCCTACA_L001_17236_1 lane1_3600STDY6167930_AGTGTAGT_L001_17236_1 
#>                                      "0111"                                       "013" 
#> lane1_3600STDY6167931_GTGGCCAA_L001_17236_1 lane1_3600STDY6167932_AAATACTC_L001_17236_1 
#>                                       "013"                                       "014" 
#> lane1_3600STDY6167933_CACCCGTC_L001_17236_1 lane1_3600STDY6167934_TCGTGGTT_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6167935_ACTTGGGG_L001_17236_1 lane1_3600STDY6167936_GGCTGCTT_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6167937_CAGGGTCG_L001_17236_1 lane1_3600STDY6167938_CTCGTCGA_L001_17236_1 
#>                                      "0112"                                      "0111" 
#> lane1_3600STDY6167939_TCTACAGT_L001_17236_1 lane1_3600STDY6167940_CTTCTAGA_L001_17236_1 
#>                                      "0112"                                      "0342" 
#> lane1_3600STDY6167941_AACGGCTT_L001_17236_1 lane1_3600STDY6167942_ATAAGACT_L001_17236_1 
#>                                      "0111"                                       "013" 
#> lane1_3600STDY6167943_GTTTTTCG_L001_17236_1 lane1_3600STDY6167944_ATTGGTAT_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167945_CGCCAGTA_L001_17236_1 lane1_3600STDY6167946_AAGCCGAA_L001_17236_1 
#>                                      "0113"                                      "0113" 
#> lane1_3600STDY6167947_TGACCCAC_L001_17236_1 lane1_3600STDY6167948_ATTGCACA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167949_CTTTTGAT_L001_17236_1 lane1_3600STDY6167950_TAGCGAGA_L001_17236_1 
#>                                      "0112"                                      "0221" 
#> lane1_3600STDY6167951_TTCGCAGG_L001_17236_1 lane1_3600STDY6167952_TAGTTATT_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167953_TCCTCCGA_L001_17236_1 lane1_3600STDY6167954_GCGGGTCT_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167955_GATTCTAT_L001_17236_1 lane1_3600STDY6167956_ATGCAAAG_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167957_GTCTGAGG_L001_17236_1 lane1_3600STDY6167958_TCTGGCGA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167959_AATTTGCG_L001_17236_1 lane1_3600STDY6167960_TGGGTTGG_L001_17236_1 
#>                                      "0111"                                      "0342" 
#> lane1_3600STDY6167961_AGTTGAAA_L001_17236_1 lane1_3600STDY6167962_GACCGGAA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167963_GATCGAAC_L001_17236_1 lane1_3600STDY6167964_GTATAGGG_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167965_GGTAAGAG_L001_17236_1 lane1_3600STDY6167966_AGTCCGAT_L001_17236_1 
#>                                      "0221"                                      "0112" 
#> lane1_3600STDY6167967_ATACAGGC_L001_17236_1 lane1_3600STDY6167968_TGAGACTC_L001_17236_1 
#>                                      "0111"                                      "0113" 
#> lane1_3600STDY6167969_ACTCAGGA_L001_17236_1 lane1_3600STDY6167970_GTGTCTGA_L001_17236_1 
#>                                      "0113"                                      "0342" 
#> lane1_3600STDY6167971_CTTGAATC_L001_17236_1 lane1_3600STDY6167972_CCGCATGA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167973_AAGTAACA_L001_17236_1 lane1_3600STDY6167974_GTGGTACT_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167975_AGCTGTGC_L001_17236_1 lane1_3600STDY6167976_TTACCTTC_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167977_TCCGGGTA_L001_17236_1 lane1_3600STDY6167978_CTACGTAA_L001_17236_1 
#>                                      "0112"                                      "0111" 
#> lane1_3600STDY6167979_TCGGACCG_L001_17236_1 lane1_3600STDY6167980_ATGCGTCG_L001_17236_1 
#>                                      "0111"                                       "013" 
#> lane1_3600STDY6167981_TTCTTAGC_L001_17236_1 lane1_3600STDY6167982_TGAGTAAG_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6167983_AAGTGATA_L001_17236_1 lane1_3600STDY6167984_TCGATGCG_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167985_TATTCTGG_L001_17236_1 lane1_3600STDY6167986_AGCCGTGA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167987_AAGCCTTC_L001_17236_1 lane1_3600STDY6167988_AGGTATCC_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167989_AGGATCTC_L001_17236_1 lane1_3600STDY6167990_CTGTTTGA_L001_17236_1 
#>                                      "0221"                                      "0111" 
#> lane1_3600STDY6167991_GGAATTTC_L001_17236_1 lane1_3600STDY6167992_TTGGAGCA_L001_17236_1 
#>                                       "013"                                      "0342" 
#> lane1_3600STDY6167993_AAGGTCTG_L001_17236_1 lane1_3600STDY6167994_AATTAGGC_L001_17236_1 
#>                                      "0342"                                      "0113" 
#> lane1_3600STDY6167995_AATCGGGT_L001_17236_1 lane1_3600STDY6167996_AGGTAGAC_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167997_CTTATTCC_L001_17236_1 lane1_3600STDY6167998_CAGGCTCT_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167999_AAAGCACG_L001_17236_1 lane1_3600STDY6168000_GTATACAC_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6168001_GGACATAT_L001_17236_1 lane1_3600STDY6168002_CGGTTGGG_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6168003_GTCCGTGA_L001_17236_1 lane1_3600STDY6168004_GCCGAACC_L001_17236_1 
#>                                      "0111"                                       "013" 
#> lane1_3600STDY6168005_ACTTTACT_L001_17236_1 lane1_3600STDY6168006_GGGTCCAT_L001_17236_1 
#>                                      "0342"                                       "013" 
#> lane1_3600STDY6168007_ATAACTAG_L001_17236_1 lane1_3600STDY6168008_AATAGAGA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6168009_TCACCATT_L001_17236_1 lane1_3600STDY6168010_CGCCTGAT_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6168011_GCGTGAAC_L001_17236_1 lane1_3600STDY6168012_TAAGGGTG_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6168013_GGTGTCGA_L001_17236_1 lane1_3600STDY6168014_CCGTTAGG_L001_17236_1 
#>                                      "0112"                                       "013" 
#> lane1_3600STDY6168015_TGGCAAAA_L001_17236_1 lane1_3600STDY6168016_CCTACCCG_L001_17236_1 
#>                                      "0111"                                      "0222" 
#> lane1_3600STDY6168017_AACAGCGC_L001_17236_1 lane1_3600STDY6168018_TATACATC_L001_17236_1 
#>                                       "013"                                      "0221" 
#> lane1_3600STDY6168019_AAGCGACT_L001_17236_1 lane1_3600STDY6168020_GAAGCGCA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6168021_ACCTCTAC_L001_17236_1 lane1_3600STDY6168022_GATTGCGT_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6168023_GCTGGTTG_L001_17236_1 lane1_3600STDY6168024_ATCGTCCT_L001_17236_1 
#>                                      "0221"                                      "0112" 
#> lane1_3600STDY6168025_GGACACGG_L001_17236_1 lane1_3600STDY6168026_CGCACCTA_L001_17236_1 
#>                                      "0112"                                      "0111" 
#> lane1_3600STDY6168027_CTTCGGCT_L001_17236_1 lane1_3600STDY6168028_CGAATCGA_L001_17236_1 
#>                                      "0111"                                       "014" 
#> lane1_3600STDY6168029_TAACAACT_L001_17236_1 lane1_3600STDY6168030_AGCTCTTT_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168031_TAATCCCT_L001_17236_1 lane1_3600STDY6168032_AGGACACT_L001_17236_1 
#>                                      "0113"                                      "0342" 
#> lane1_3600STDY6168033_TTACACTA_L001_17236_1 lane1_3600STDY6168034_AAACATCA_L001_17236_1 
#>                                      "0111"                                      "0113" 
#> lane1_3600STDY6168035_CCATAGCT_L001_17236_1 lane1_3600STDY6168036_GTTATGGC_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6168037_ATCCCCTA_L001_17236_1 lane1_3600STDY6168038_CATACTAC_L001_17236_1 
#>                                      "0111"                                       "014" 
#> lane1_3600STDY6168039_CAATTGTT_L001_17236_1 lane1_3600STDY6168040_AAACCCGT_L001_17236_1 
#>                                       "014"                                      "0221" 
#> lane1_3600STDY6168041_CAGATTTC_L001_17236_1 lane1_3600STDY6168042_GCGTAGGT_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6168043_GGCATTCG_L001_17236_1 lane1_3600STDY6168044_TGGGGCTT_L001_17236_1 
#>                                      "0113"                                      "0112" 
#> lane1_3600STDY6168045_CTGACTAC_L001_17236_1 lane1_3600STDY6168046_AACTTTTA_L001_17236_1 
#>                                      "0112"                                      "0342" 
#> lane1_3600STDY6168047_AGGGATTC_L001_17236_1 lane1_3600STDY6168048_CCGAGTAG_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6168049_GGGGACTA_L001_17236_1 lane1_3600STDY6168050_GGAGTTGA_L001_17236_1 
#>                                      "0113"                                      "0111" 
#> lane1_3600STDY6168051_AGCTCATC_L001_17236_1 lane1_3600STDY6168052_TAATCAAC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168053_ACTGGTCG_L001_17236_1 lane1_3600STDY6168054_GACGATTG_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168055_AGCGATGA_L001_17236_1 lane1_3600STDY6168056_GAAGAGAT_L001_17236_1 
#>                                      "0113"                                      "0342" 
#> lane1_3600STDY6168057_CGTATGCA_L001_17236_1 lane1_3600STDY6168058_CACGTGCG_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6168059_GCTTAAAC_L001_17236_1 lane1_3600STDY6168060_GTTCCGCA_L001_17236_1 
#>                                       "013"                                      "0111" 
#> lane1_3600STDY6168061_GTATCGTC_L001_17236_1 lane1_3600STDY6168062_GTCCTCAC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168063_GTACGGAC_L001_17236_1 lane1_3600STDY6168064_CATTTTGC_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6168065_TCCTCTCT_L001_17236_1 lane1_3600STDY6168066_AGCAACGA_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6168067_ACAGAAGA_L001_17236_1 lane1_3600STDY6168068_CGACCCTT_L001_17236_1 
#>                                       "013"                                      "0111" 
#> lane1_3600STDY6168069_CTGCCTAG_L001_17236_1 lane1_3600STDY6168070_GAGCGCAT_L001_17236_1 
#>                                      "0221"                                       "013" 
#> lane1_3600STDY6168071_AACTTATC_L001_17236_1 lane1_3600STDY6168072_CCGATGTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168073_TTACTACC_L001_17236_1 lane1_3600STDY6168074_CAAGGAGC_L001_17236_1 
#>                                       "013"                                       "014" 
#> lane1_3600STDY6168075_TGGTTGAC_L001_17236_1 lane1_3600STDY6168076_ACCTGCTG_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane4_3600STDY6184181_ATCACGTT_L004_17480_1 lane4_3600STDY6184182_CGATGTTT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184183_TTAGGCAT_L004_17480_1 lane4_3600STDY6184184_TGACCACT_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184185_ACAGTGGT_L004_17480_1 lane4_3600STDY6184186_GCCAATGT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184187_CAGATCTG_L004_17480_1 lane4_3600STDY6184188_ACTTGATG_L004_17480_1 
#>                                       "032"                                      "0211" 
#> lane4_3600STDY6184189_GATCAGCG_L004_17480_1 lane4_3600STDY6184190_TAGCTTGT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184191_GGCTACAG_L004_17480_1 lane4_3600STDY6184192_CTTGTACT_L004_17480_1 
#>                                       "032"                                      "0211" 
#> lane4_3600STDY6184193_TGGTTGTT_L004_17480_1 lane4_3600STDY6184194_TCTCGGTT_L004_17480_1 
#>                                       "032"                                       "031" 
#> lane4_3600STDY6184195_TAAGCGTT_L004_17480_1 lane4_3600STDY6184196_TCCGTCTT_L004_17480_1 
#>                                       "031"                                      "0341" 
#> lane4_3600STDY6184197_TGTACCTT_L004_17480_1 lane4_3600STDY6184198_TTCTGTGT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184199_TCTGCTGT_L004_17480_1 lane4_3600STDY6184200_TTGGAGGT_L004_17480_1 
#>                                      "0212"                                      "0212" 
#> lane4_3600STDY6184201_TCGAGCGT_L004_17480_1 lane4_3600STDY6184202_TGATACGT_L004_17480_1 
#>                                       "031"                                       "032" 
#> lane4_3600STDY6184203_TGCATAGT_L004_17480_1 lane4_3600STDY6184204_TTGACTCT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184205_TGCGATCT_L004_17480_1 lane4_3600STDY6184206_TTCCTGCT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184207_TAGTGACT_L004_17480_1 lane4_3600STDY6184208_TACAGGAT_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184209_TCCTCAAT_L004_17480_1 lane4_3600STDY6184210_TGTGGTTG_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184211_TAGTCTTG_L004_17480_1 lane4_3600STDY6184212_TTCCATTG_L004_17480_1 
#>                                      "0212"                                      "0211" 
#> lane4_3600STDY6184213_TCGAAGTG_L004_17480_1 lane4_3600STDY6184214_TAACGCTG_L004_17480_1 
#>                                      "0221"                                      "0341" 
#> lane4_3600STDY6184215_TTGGTATG_L004_17480_1 lane4_3600STDY6184216_TGAACTGG_L004_17480_1 
#>                                      "0213"                                      "0222" 
#> lane4_3600STDY6184217_TACTTCGG_L004_17480_1 lane4_3600STDY6184218_TCTCACGG_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184219_TCAGGAGG_L004_17480_1 lane4_3600STDY6184220_TAAGTTCG_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184221_TCCAGTCG_L004_17480_1 lane4_3600STDY6184222_TGTATGCG_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184223_TCATTGAG_L004_17480_1 lane4_3600STDY6184224_TGGCTCAG_L004_17480_1 
#>                                      "0212"                                      "0213" 
#> lane4_3600STDY6184225_TATGCCAG_L004_17480_1 lane4_3600STDY6184226_TCAGATTC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184227_TACTAGTC_L004_17480_1 lane4_3600STDY6184228_TTCAGCTC_L004_17480_1 
#>                                      "0212"                                       "032" 
#> lane4_3600STDY6184229_TGTCTATC_L004_17480_1 lane4_3600STDY6184230_TATGTGGC_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184231_TTACTCGC_L004_17480_1 lane4_3600STDY6184232_TCGTTAGC_L004_17480_1 
#>                                      "0213"                                      "0341" 
#> lane4_3600STDY6184233_TACCGAGC_L004_17480_1 lane4_3600STDY6184234_TGTTCTCC_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184235_TTCGCACC_L004_17480_1 lane4_3600STDY6184236_TTGCGTAC_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184237_TCTACGAC_L004_17480_1 lane4_3600STDY6184238_TGACAGAC_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184239_TAGAACAC_L004_17480_1 lane4_3600STDY6184240_TCATCCTA_L004_17480_1 
#>                                      "0212"                                      "0212" 
#> lane4_3600STDY6184241_TGCTGATA_L004_17480_1 lane4_3600STDY6184242_TAGACGGA_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184243_TGTGAAGA_L004_17480_1 lane4_3600STDY6184244_TCTCTTCA_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184245_TTGTTCCA_L004_17480_1 lane4_3600STDY6184246_TGAAGCCA_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184247_TACCACCA_L004_17480_1 lane4_3600STDY6184248_TGCGTGAA_L004_17480_1 
#>                                      "0222"                                      "0212" 
#> lane4_3600STDY6184249_GGTGAGTT_L004_17480_1 lane4_3600STDY6184250_GATCTCTT_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184251_GTGTCCTT_L004_17480_1 lane4_3600STDY6184252_GACGGATT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184253_GCAACATT_L004_17480_1 lane4_3600STDY6184254_GGTCGTGT_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184255_GAATCTGT_L004_17480_1 lane4_3600STDY6184256_GTACATCT_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184257_GAGGTGCT_L004_17480_1 lane4_3600STDY6184258_GCATGGCT_L004_17480_1 
#>                                      "0232"                                      "0211" 
#> lane4_3600STDY6184259_GTTAGCCT_L004_17480_1 lane4_3600STDY6184260_GTCGCTAT_L004_17480_1 
#>                                      "0211"                                      "0222" 
#> lane4_3600STDY6184261_GGAATGAT_L004_17480_1 lane4_3600STDY6184262_GAGCCAAT_L004_17480_1 
#>                                      "0232"                                      "0212" 
#> lane4_3600STDY6184263_GCTCCTTG_L004_17480_1 lane4_3600STDY6184264_GTAAGGTG_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184265_GAGGATGG_L004_17480_1 lane4_3600STDY6184266_GTTGTCGG_L004_17480_1 
#>                                      "0211"                                       "032" 
#> lane4_3600STDY6184267_GGATTAGG_L004_17480_1 lane4_3600STDY6184268_GATAGAGG_L004_17480_1 
#>                                      "0213"                                      "0211" 
#> lane4_3600STDY6184269_GTGTGTCG_L004_17480_1 lane4_3600STDY6184270_GCAATCCG_L004_17480_1 
#>                                      "0341"                                      "0232" 
#> lane4_3600STDY6184271_GACCTTAG_L004_17480_1 lane4_3600STDY6184272_GCCTGTTC_L004_17480_1 
#>                                      "0222"                                      "0211" 
#> lane4_3600STDY6184273_GCACTGTC_L004_17480_1 lane4_3600STDY6184274_GCTAACTC_L004_17480_1 
#>                                      "0211"                                      "0341" 
#> lane4_3600STDY6184275_GATTCATC_L004_17480_1 lane4_3600STDY6184276_GTCTTGGC_L004_17480_1 
#>                                      "0213"                                       "032" 
#> lane4_3600STDY6184277_GTAGAAGC_L004_17480_1 lane4_3600STDY6184278_GATGGTCC_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184279_GTGCTACC_L004_17480_1 lane4_3600STDY6184280_GCGATTAC_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184281_GGTTGGAC_L004_17480_1 lane4_3600STDY6184282_GGCACAAC_L004_17480_1 
#>                                      "0341"                                      "0222" 
#> lane4_3600STDY6184283_GACACTTA_L004_17480_1 lane4_3600STDY6184284_GTGCAGTA_L004_17480_1 
#>                                      "0211"                                      "0341" 
#> lane4_3600STDY6184285_GGAGTCTA_L004_17480_1 lane4_3600STDY6184286_GCTATGGA_L004_17480_1 
#>                                      "0212"                                      "0211" 
#> lane4_3600STDY6184287_GAGTGCGA_L004_17480_1 lane4_3600STDY6184288_GTAACCGA_L004_17480_1 
#>                                      "0212"                                      "0212" 
#> lane4_3600STDY6184289_GGCAAGCA_L004_17480_1 lane4_3600STDY6184290_GCCTTACA_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184291_GAACGACA_L004_17480_1 lane4_3600STDY6184292_GCAGGTAA_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184293_GCGTCGAA_L004_17480_1 lane4_3600STDY6184294_CGTTCGGT_L004_17480_1 
#>                                      "0341"                                      "0222" 
#> lane4_3600STDY6184295_CACCAGGT_L004_17480_1 lane4_3600STDY6184296_CTGCGAGT_L004_17480_1 
#>                                      "0211"                                      "0341" 
#> lane4_3600STDY6184297_CCGTATCT_L004_17480_1 lane4_3600STDY6184298_CGCTTCCT_L004_17480_1 
#>                                      "0211"                                      "0341" 
#> lane4_3600STDY6184299_CAAGACCT_L004_17480_1 lane4_3600STDY6184300_CACACACT_L004_17480_1 
#>                                      "0211"                                       "032" 
#> lane4_3600STDY6184301_CCTAGTAT_L004_17480_1 lane4_3600STDY6184302_CCACCGAT_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184303_CTTCACAT_L004_17480_1 lane4_3600STDY6184304_CTATCATG_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184305_CATGAATG_L004_17480_1 lane4_3600STDY6184306_CCACTTGG_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184307_CTGTACGG_L004_17480_1 lane4_3600STDY6184308_CTAGATAG_L004_17480_1 
#>                                      "0211"                                      "0341" 
#> lane4_3600STDY6184309_CACTCGAG_L004_17480_1 lane4_3600STDY6184310_CCGACAAG_L004_17480_1 
#>                                      "0222"                                       "032" 
#> lane4_3600STDY6184311_CTTGCTTC_L004_17480_1 lane4_3600STDY6184312_CATAGGTC_L004_17480_1 
#>                                      "0212"                                      "0222" 
#> lane4_3600STDY6184313_CACATTGC_L004_17480_1 lane4_3600STDY6184314_CGCTAAGC_L004_17480_1 
#>                                      "0213"                                      "0212" 
#> lane4_3600STDY6184315_CAACCTCC_L004_17480_1 lane4_3600STDY6184316_CAGCTGAC_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184317_CTCAAGAC_L004_17480_1 lane4_3600STDY6184318_CGTGTCAC_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184319_CCATGCAC_L004_17480_1 lane4_3600STDY6184320_CGTTACTA_L004_17480_1 
#>                                      "0222"                                      "0341" 
#> lane4_3600STDY6184321_CAAGTAGA_L004_17480_1 lane4_3600STDY6184322_CTCTCTCA_L004_17480_1 
#>                                      "0213"                                      "0211" 
#> lane4_3600STDY6184323_CGACTGCA_L004_17480_1 lane4_3600STDY6184324_CCTGAGCA_L004_17480_1 
#>                                      "0212"                                      "0222" 
#> lane4_3600STDY6184325_CAGGCTAA_L004_17480_1 lane4_3600STDY6184326_CGGAGGAA_L004_17480_1 
#>                                       "032"                                      "0211" 
#> lane4_3600STDY6184327_AGGAGATT_L004_17480_1 lane4_3600STDY6184328_AGGCAGCT_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184329_ACGTTCAT_L004_17480_1 lane4_3600STDY6184330_AACGTGTG_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184331_AGACCGTG_L004_17480_1 lane4_3600STDY6184332_ACCTCTGG_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184333_ATCCTAGG_L004_17480_1 lane4_3600STDY6184334_ATCAACCG_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184335_AGGTCACG_L004_17480_1 lane4_3600STDY6184336_ACTGTTAG_L004_17480_1 
#>                                       "032"                                      "0211" 
#> lane4_3600STDY6184337_AAGAGTAG_L004_17480_1 lane4_3600STDY6184338_ATTCGGAG_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184339_ACGCAATC_L004_17480_1 lane4_3600STDY6184340_ACAAGTGC_L004_17480_1 
#>                                      "0213"                                      "0211" 
#> lane4_3600STDY6184341_ATGGATCC_L004_17480_1 lane4_3600STDY6184342_AGAGGACC_L004_17480_1 
#>                                      "0212"                                      "0222" 
#> lane4_3600STDY6184343_ATCTCCAC_L004_17480_1 lane4_3600STDY6184344_ATTGGCTA_L004_17480_1 
#>                                      "0213"                                      "0212" 
#> lane4_3600STDY6184345_AATCCTGA_L004_17480_1 lane4_3600STDY6184346_AGGATTCA_L004_17480_1 
#>                                       "032"                                      "0222" 
#> lane4_3600STDY6184347_AACTGGCA_L004_17480_1 lane4_3600STDY6184348_ACAACGCA_L004_17480_1 
#>                                      "0221"                                      "0222" 
#> lane4_3600STDY6184349_CGGAAACA_L004_17480_1 lane4_3600STDY6184350_AATGAATT_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184351_TAGGACCC_L004_17480_1 lane4_3600STDY6184352_TCTCAGTG_L004_17480_1 
#>                                      "0341"                                      "0222" 
#> lane4_3600STDY6184353_CATGGGAA_L004_17480_1 lane4_3600STDY6184354_CCTAAGAT_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184355_CTCAGATA_L004_17480_1 lane4_3600STDY6184356_CCCATAGG_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184357_GCTATGAC_L004_17480_1 lane4_3600STDY6184358_GCTGTGAA_L004_17480_1 
#>                                      "0222"                                      "0222" 
#> lane4_3600STDY6184359_ACCTTCAA_L004_17480_1 lane4_3600STDY6184360_ACAAAGCC_L004_17480_1 
#>                                      "0223"                                      "0221" 
#> lane4_3600STDY6184361_CAAAACCG_L004_17480_1 lane4_3600STDY6184362_GCTGGACA_L004_17480_1 
#>                                      "0211"                                       "032" 
#> lane4_3600STDY6184363_AAGTCGTA_L004_17480_1 lane4_3600STDY6184364_CATCCGTA_L004_17480_1 
#>                                      "0211"                                      "0232" 
#> lane4_3600STDY6184365_TTGTGTCT_L004_17480_1 lane4_3600STDY6184366_TGCTCTAG_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184367_ACCCAACA_L004_17480_1 lane4_3600STDY6184368_CGATCTGA_L004_17480_1 
#>                                      "0222"                                      "0211" 
#> lane4_3600STDY6184369_GTTCCACG_L004_17480_1 lane4_3600STDY6184370_ACTCTTTC_L004_17480_1 
#>                                      "0212"                                      "0213" 
#> lane4_3600STDY6184371_TATTGGAG_L004_17480_1 lane4_3600STDY6184372_TAAACATA_L004_17480_1 
#>                                      "0221"                                      "0221" 
#> lane4_3600STDY6184373_GTAAGATA_L004_17480_1 lane4_3600STDY6184374_TACCGCAA_L004_17480_1 
#>                                      "0223"                                       "032" 
#> lane4_3600STDY6184375_TATCTCCT_L004_17480_1 lane4_3600STDY6184376_TGTCATCT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184377_ATAGCTCT_L004_17480_1 lane4_3600STDY6184378_AGTCCAAC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184379_TTTGGGCA_L004_17480_1 lane4_3600STDY6184380_TCTGACGC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184381_TGTCGACT_L004_17480_1 lane4_3600STDY6184382_GTCACGTA_L004_17480_1 
#>                                       "032"                                       "031" 
#> lane4_3600STDY6184383_TTGAGCGA_L004_17480_1 lane4_3600STDY6184384_GAGACATA_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184385_GTCAAGCT_L004_17480_1 lane4_3600STDY6184386_AGCAAGTT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184387_GACGCTCA_L004_17480_1 lane4_3600STDY6184388_ACGGCAGC_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184389_AGAACTGA_L004_17480_1 lane4_3600STDY6184390_CGCCTTTG_L004_17480_1 
#>                                      "0212"                                      "0222" 
#> lane4_3600STDY6184391_TAAGGTCA_L004_17480_1 lane4_3600STDY6184392_ACGTTGGC_L004_17480_1 
#>                                      "0222"                                      "0212" 
#> lane4_3600STDY6184393_CCAGCTTA_L004_17480_1 lane4_3600STDY6184394_GAATCCTA_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184395_ACTTCGTA_L004_17480_1 lane4_3600STDY6184396_TAGTCGGT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184397_CGCACGAG_L004_17480_1 lane4_3600STDY6184398_ACGTACTA_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184399_AGCGCCAA_L004_17480_1 lane4_3600STDY6184400_GCCTGCCC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184401_AGGACGAT_L004_17480_1 lane4_3600STDY6184402_CTTGACCG_L004_17480_1 
#>                                      "0213"                                       "032" 
#> lane4_3600STDY6184403_AGGTCTAA_L004_17480_1 lane4_3600STDY6184404_CGAGATCC_L004_17480_1 
#>                                      "0213"                                       "032" 
#> lane4_3600STDY6184405_ATTAGCGG_L004_17480_1 lane4_3600STDY6184406_GCGCTGAT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184407_TGCTGAAC_L004_17480_1 lane4_3600STDY6184408_GAGGGCAG_L004_17480_1 
#>                                       "032"                                      "0213" 
#> lane4_3600STDY6184409_GTTTTCAC_L004_17480_1 lane4_3600STDY6184410_GAGATGCC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184411_TTGAGAAG_L004_17480_1 lane4_3600STDY6184412_GCATCCGG_L004_17480_1 
#>                                       "032"                                      "0232" 
#> lane4_3600STDY6184413_GTCACCAG_L004_17480_1 lane4_3600STDY6184414_GAGGTCGC_L004_17480_1 
#>                                      "0211"                                      "0222" 
#> lane4_3600STDY6184415_AAGGGGTA_L004_17480_1 lane4_3600STDY6184416_TTTTACGT_L004_17480_1 
#>                                      "0212"                                      "0211" 
#> lane4_3600STDY6184417_TTCCTACA_L004_17480_1 lane4_3600STDY6184418_AGTGTAGT_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184419_GTGGCCAA_L004_17480_1 lane4_3600STDY6184420_AAATACTC_L004_17480_1 
#>                                      "0212"                                       "032" 
#> lane4_3600STDY6184421_CACCCGTC_L004_17480_1 lane4_3600STDY6184422_TCGTGGTT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184423_ACTTGGGG_L004_17480_1 lane4_3600STDY6184424_GGCTGCTT_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184425_CAGGGTCG_L004_17480_1 lane4_3600STDY6184426_CTCGTCGA_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184427_TCTACAGT_L004_17480_1 lane4_3600STDY6184428_CTTCTAGA_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184429_AACGGCTT_L004_17480_1 lane4_3600STDY6184430_ATAAGACT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184431_GTTTTTCG_L004_17480_1 lane4_3600STDY6184432_ATTGGTAT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184433_CGCCAGTA_L004_17480_1 lane4_3600STDY6184434_AAGCCGAA_L004_17480_1 
#>                                      "0223"                                       "032" 
#> lane4_3600STDY6184435_TGACCCAC_L004_17480_1 lane4_3600STDY6184436_ATTGCACA_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184437_CTTTTGAT_L004_17480_1 lane4_3600STDY6184438_TAGCGAGA_L004_17480_1 
#>                                      "0213"                                      "0222" 
#> lane4_3600STDY6184439_TTCGCAGG_L004_17480_1 lane4_3600STDY6184440_TAGTTATT_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184441_TCCTCCGA_L004_17480_1 lane4_3600STDY6184442_GCGGGTCT_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184443_GATTCTAT_L004_17480_1 lane4_3600STDY6184444_ATGCAAAG_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184445_GTCTGAGG_L004_17480_1 lane4_3600STDY6184446_TCTGGCGA_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184447_AATTTGCG_L004_17480_1 lane4_3600STDY6184448_TGGGTTGG_L004_17480_1 
#>                                      "0222"                                      "0232" 
#> lane4_3600STDY6184449_AGTTGAAA_L004_17480_1 lane4_3600STDY6184450_GACCGGAA_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184451_GATCGAAC_L004_17480_1 lane4_3600STDY6184452_GTATAGGG_L004_17480_1 
#>                                      "0342"                                      "0341" 
#> lane4_3600STDY6184453_GGTAAGAG_L004_17480_1 lane4_3600STDY6184454_AGTCCGAT_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184455_ATACAGGC_L004_17480_1 lane4_3600STDY6184456_TGAGACTC_L004_17480_1 
#>                                      "0213"                                      "0222" 
#> lane4_3600STDY6184457_ACTCAGGA_L004_17480_1 lane4_3600STDY6184458_GTGTCTGA_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184459_CTTGAATC_L004_17480_1 lane4_3600STDY6184460_CCGCATGA_L004_17480_1 
#>                                      "0211"                                      "0222" 
#> lane4_3600STDY6184461_AAGTAACA_L004_17480_1 lane4_3600STDY6184462_GTGGTACT_L004_17480_1 
#>                                      "0222"                                      "0222" 
#> lane4_3600STDY6184463_AGCTGTGC_L004_17480_1 lane4_3600STDY6184464_TTACCTTC_L004_17480_1 
#>                                      "0222"                                      "0222" 
#> lane4_3600STDY6184465_TCCGGGTA_L004_17480_1 lane4_3600STDY6184466_CTACGTAA_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184467_TCGGACCG_L004_17480_1 lane4_3600STDY6184468_ATGCGTCG_L004_17480_1 
#>                                      "0211"                                       "032" 
#> lane4_3600STDY6184469_TTCTTAGC_L004_17480_1 lane4_3600STDY6184470_TGAGTAAG_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184471_AAGTGATA_L004_17480_1 lane4_3600STDY6184472_TCGATGCG_L004_17480_1 
#>                                      "0213"                                      "0341" 
#> lane4_3600STDY6184473_TATTCTGG_L004_17480_1 lane4_3600STDY6184474_AGCCGTGA_L004_17480_1 
#>                                      "0213"                                      "0211" 
#> lane4_3600STDY6184475_AAGCCTTC_L004_17480_1 lane4_3600STDY6184476_AGGTATCC_L004_17480_1 
#>                                      "0213"                                      "0341" 
#> lane4_3600STDY6184477_AGGATCTC_L004_17480_1 lane4_3600STDY6184478_CTGTTTGA_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184479_GGAATTTC_L004_17480_1 lane4_3600STDY6184480_TTGGAGCA_L004_17480_1 
#>                                      "0341"                                      "0213" 
#> lane4_3600STDY6184481_AAGGTCTG_L004_17480_1 lane4_3600STDY6184482_AATTAGGC_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184483_AATCGGGT_L004_17480_1 lane4_3600STDY6184484_AGGTAGAC_L004_17480_1 
#>                                      "0212"                                      "0212" 
#> lane4_3600STDY6184485_CTTATTCC_L004_17480_1 lane4_3600STDY6184486_CAGGCTCT_L004_17480_1 
#>                                      "0341"                                      "0222" 
#> lane4_3600STDY6184487_AAAGCACG_L004_17480_1 lane4_3600STDY6184488_GTATACAC_L004_17480_1 
#>                                      "0222"                                      "0211" 
#> lane4_3600STDY6184489_GGACATAT_L004_17480_1 lane4_3600STDY6184490_CGGTTGGG_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184491_GTCCGTGA_L004_17480_1 lane4_3600STDY6184492_GCCGAACC_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184493_ACTTTACT_L004_17480_1 lane4_3600STDY6184494_GGGTCCAT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184495_ATAACTAG_L004_17480_1 lane4_3600STDY6184496_AATAGAGA_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184497_TCACCATT_L004_17480_1 lane4_3600STDY6184498_CGCCTGAT_L004_17480_1 
#>                                      "0341"                                      "0222" 
#> lane4_3600STDY6184499_GCGTGAAC_L004_17480_1 lane4_3600STDY6184500_TAAGGGTG_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184501_GGTGTCGA_L004_17480_1 lane4_3600STDY6184502_CCGTTAGG_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184503_TGGCAAAA_L004_17480_1 lane4_3600STDY6184504_CCTACCCG_L004_17480_1 
#>                                      "0213"                                      "0222" 
#> lane4_3600STDY6184505_AACAGCGC_L004_17480_1 lane4_3600STDY6184506_TATACATC_L004_17480_1 
#>                                      "0213"                                      "0341" 
#> lane4_3600STDY6184507_AAGCGACT_L004_17480_1 lane4_3600STDY6184508_GAAGCGCA_L004_17480_1 
#>                                      "0211"                                      "0222" 
#> lane4_3600STDY6184509_ACCTCTAC_L004_17480_1 lane4_3600STDY6184510_GATTGCGT_L004_17480_1 
#>                                      "0222"                                      "0232" 
#> lane4_3600STDY6184511_GCTGGTTG_L004_17480_1 lane4_3600STDY6184512_ATCGTCCT_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184513_GGACACGG_L004_17480_1 lane4_3600STDY6184514_CGCACCTA_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184515_CTTCGGCT_L004_17480_1 lane4_3600STDY6184516_CGAATCGA_L004_17480_1 
#>                                      "0212"                                       "032" 
#> lane4_3600STDY6184517_TAACAACT_L004_17480_1 lane4_3600STDY6184518_AGCTCTTT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184519_TAATCCCT_L004_17480_1 lane4_3600STDY6184520_AGGACACT_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184521_TTACACTA_L004_17480_1 lane4_3600STDY6184522_AAACATCA_L004_17480_1 
#>                                      "0341"                                      "0213" 
#> lane4_3600STDY6184523_CCATAGCT_L004_17480_1 lane4_3600STDY6184524_GTTATGGC_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184525_ATCCCCTA_L004_17480_1 lane4_3600STDY6184526_CATACTAC_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184527_CAATTGTT_L004_17480_1 lane4_3600STDY6184528_AAACCCGT_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184529_CAGATTTC_L004_17480_1 lane4_3600STDY6184530_GCGTAGGT_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184531_GGCATTCG_L004_17480_1 lane4_3600STDY6184532_TGGGGCTT_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184533_CTGACTAC_L004_17480_1 lane4_3600STDY6184534_AACTTTTA_L004_17480_1 
#>                                      "0212"                                      "0211" 
#> lane4_3600STDY6184535_AGGGATTC_L004_17480_1 lane4_3600STDY6184536_CCGAGTAG_L004_17480_1 
#>                                      "0221"                                      "0212" 
#> lane4_3600STDY6184537_GGGGACTA_L004_17480_1 lane4_3600STDY6184538_GGAGTTGA_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184539_AGCTCATC_L004_17480_1 lane4_3600STDY6184540_TAATCAAC_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184541_ACTGGTCG_L004_17480_1 lane4_3600STDY6184542_GACGATTG_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184543_AGCGATGA_L004_17480_1 lane4_3600STDY6184544_GAAGAGAT_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184545_CGTATGCA_L004_17480_1 lane4_3600STDY6184546_CACGTGCG_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184547_GCTTAAAC_L004_17480_1 lane4_3600STDY6184548_GTTCCGCA_L004_17480_1 
#>                                       "032"                                      "0221" 
#> lane4_3600STDY6184549_GTATCGTC_L004_17480_1 lane4_3600STDY6184550_GTCCTCAC_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184551_GTACGGAC_L004_17480_1 lane4_3600STDY6184552_CATTTTGC_L004_17480_1 
#>                                      "0221"                                      "0221" 
#> lane4_3600STDY6184553_TCCTCTCT_L004_17480_1 lane4_3600STDY6184554_AGCAACGA_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184555_ACAGAAGA_L004_17480_1 lane4_3600STDY6184556_CGACCCTT_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184557_CTGCCTAG_L004_17480_1 lane4_3600STDY6184558_GAGCGCAT_L004_17480_1 
#>                                      "0212"                                      "0222" 
#> lane4_3600STDY6184559_AACTTATC_L004_17480_1 lane4_3600STDY6184560_CCGATGTA_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184561_TTACTACC_L004_17480_1 lane4_3600STDY6184562_CAAGGAGC_L004_17480_1 
#>                                      "0341"                                      "0221" 
#> lane4_3600STDY6184563_TGGTTGAC_L004_17480_1 lane4_3600STDY6184564_ACCTGCTG_L004_17480_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6183797_ATCACGTT_L001_17592_1 lane1_3600STDY6183798_CGATGTTT_L001_17592_1 
#>                                      "0221"                                       "031" 
#> lane1_3600STDY6183799_TTAGGCAT_L001_17592_1 lane1_3600STDY6183800_TGACCACT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183801_ACAGTGGT_L001_17592_1 lane1_3600STDY6183802_GCCAATGT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183803_CAGATCTG_L001_17592_1 lane1_3600STDY6183804_ACTTGATG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183805_GATCAGCG_L001_17592_1 lane1_3600STDY6183806_TAGCTTGT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183807_GGCTACAG_L001_17592_1 lane1_3600STDY6183808_CTTGTACT_L001_17592_1 
#>                                       "031"                                      "0223" 
#> lane1_3600STDY6183809_TGGTTGTT_L001_17592_1 lane1_3600STDY6183810_TCTCGGTT_L001_17592_1 
#>                                       "031"                                      "0221" 
#> lane1_3600STDY6183811_TAAGCGTT_L001_17592_1 lane1_3600STDY6183812_TCCGTCTT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183813_TGTACCTT_L001_17592_1 lane1_3600STDY6183814_TTCTGTGT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183815_TCTGCTGT_L001_17592_1 lane1_3600STDY6183816_TTGGAGGT_L001_17592_1 
#>                                       "033"                                      "0221" 
#> lane1_3600STDY6183817_TCGAGCGT_L001_17592_1 lane1_3600STDY6183818_TGATACGT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183819_TGCATAGT_L001_17592_1 lane1_3600STDY6183820_TTGACTCT_L001_17592_1 
#>                                       "031"                                      "0221" 
#> lane1_3600STDY6183821_TGCGATCT_L001_17592_1 lane1_3600STDY6183822_TTCCTGCT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183823_TAGTGACT_L001_17592_1 lane1_3600STDY6183824_TACAGGAT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183825_TCCTCAAT_L001_17592_1 lane1_3600STDY6183826_TGTGGTTG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183827_TAGTCTTG_L001_17592_1 lane1_3600STDY6183828_TTCCATTG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183829_TCGAAGTG_L001_17592_1 lane1_3600STDY6183830_TAACGCTG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183831_TTGGTATG_L001_17592_1 lane1_3600STDY6183832_TGAACTGG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183833_TACTTCGG_L001_17592_1 lane1_3600STDY6183834_TCTCACGG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183835_TCAGGAGG_L001_17592_1 lane1_3600STDY6183836_TAAGTTCG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183837_TCCAGTCG_L001_17592_1 lane1_3600STDY6183838_TGTATGCG_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183839_TCATTGAG_L001_17592_1 lane1_3600STDY6183840_TGGCTCAG_L001_17592_1 
#>                                      "0231"                                       "033" 
#> lane1_3600STDY6183841_TATGCCAG_L001_17592_1 lane1_3600STDY6183842_TCAGATTC_L001_17592_1 
#>                                      "0231"                                       "031" 
#> lane1_3600STDY6183843_TACTAGTC_L001_17592_1 lane1_3600STDY6183844_TTCAGCTC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183845_TGTCTATC_L001_17592_1 lane1_3600STDY6183846_TATGTGGC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183847_TTACTCGC_L001_17592_1 lane1_3600STDY6183848_TCGTTAGC_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183849_TACCGAGC_L001_17592_1 lane1_3600STDY6183850_TGTTCTCC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183851_TTCGCACC_L001_17592_1 lane1_3600STDY6183852_TTGCGTAC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183853_TCTACGAC_L001_17592_1 lane1_3600STDY6183854_TGACAGAC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183855_TAGAACAC_L001_17592_1 lane1_3600STDY6183856_TCATCCTA_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183857_TGCTGATA_L001_17592_1 lane1_3600STDY6183858_TAGACGGA_L001_17592_1 
#>                                      "0232"                                       "033" 
#> lane1_3600STDY6183859_TGTGAAGA_L001_17592_1 lane1_3600STDY6183860_TCTCTTCA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183861_TTGTTCCA_L001_17592_1 lane1_3600STDY6183862_TGAAGCCA_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183863_TACCACCA_L001_17592_1 lane1_3600STDY6183864_TGCGTGAA_L001_17592_1 
#>                                       "033"                                      "0232" 
#> lane1_3600STDY6183865_GGTGAGTT_L001_17592_1 lane1_3600STDY6183866_GATCTCTT_L001_17592_1 
#>                                      "0231"                                       "031" 
#> lane1_3600STDY6183867_GTGTCCTT_L001_17592_1 lane1_3600STDY6183868_GACGGATT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183869_GCAACATT_L001_17592_1 lane1_3600STDY6183870_GGTCGTGT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183871_GAATCTGT_L001_17592_1 lane1_3600STDY6183872_GTACATCT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183873_GAGGTGCT_L001_17592_1 lane1_3600STDY6183874_GCATGGCT_L001_17592_1 
#>                                       "031"                                      "0231" 
#> lane1_3600STDY6183875_GTTAGCCT_L001_17592_1 lane1_3600STDY6183876_GTCGCTAT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183877_GGAATGAT_L001_17592_1 lane1_3600STDY6183878_GAGCCAAT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183879_GCTCCTTG_L001_17592_1 lane1_3600STDY6183880_GTAAGGTG_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183881_GAGGATGG_L001_17592_1 lane1_3600STDY6183882_GTTGTCGG_L001_17592_1 
#>                                      "0232"                                      "0231" 
#> lane1_3600STDY6183883_GGATTAGG_L001_17592_1 lane1_3600STDY6183884_GATAGAGG_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6183885_GTGTGTCG_L001_17592_1 lane1_3600STDY6183886_GCAATCCG_L001_17592_1 
#>                                      "0232"                                      "0222" 
#> lane1_3600STDY6183887_GACCTTAG_L001_17592_1 lane1_3600STDY6183888_GCCTGTTC_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6183889_GCACTGTC_L001_17592_1 lane1_3600STDY6183890_GCTAACTC_L001_17592_1 
#>                                      "0232"                                       "033" 
#> lane1_3600STDY6183891_GATTCATC_L001_17592_1 lane1_3600STDY6183892_GTCTTGGC_L001_17592_1 
#>                                      "0231"                                       "033" 
#> lane1_3600STDY6183893_GTAGAAGC_L001_17592_1 lane1_3600STDY6183894_GATGGTCC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183895_GTGCTACC_L001_17592_1 lane1_3600STDY6183896_GCGATTAC_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183897_GGTTGGAC_L001_17592_1 lane1_3600STDY6183898_GGCACAAC_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6183899_GACACTTA_L001_17592_1 lane1_3600STDY6183900_GTGCAGTA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183901_GGAGTCTA_L001_17592_1 lane1_3600STDY6183902_GCTATGGA_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183903_GAGTGCGA_L001_17592_1 lane1_3600STDY6183904_GTAACCGA_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183905_GGCAAGCA_L001_17592_1 lane1_3600STDY6183906_GCCTTACA_L001_17592_1 
#>                                      "0232"                                       "033" 
#> lane1_3600STDY6183907_GAACGACA_L001_17592_1 lane1_3600STDY6183908_GCAGGTAA_L001_17592_1 
#>                                       "033"                                      "0232" 
#> lane1_3600STDY6183909_GCGTCGAA_L001_17592_1 lane1_3600STDY6183910_CGTTCGGT_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6183911_CACCAGGT_L001_17592_1 lane1_3600STDY6183912_CTGCGAGT_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6183913_CCGTATCT_L001_17592_1 lane1_3600STDY6183914_CGCTTCCT_L001_17592_1 
#>                                      "0232"                                      "0231" 
#> lane1_3600STDY6183915_CAAGACCT_L001_17592_1 lane1_3600STDY6183916_CACACACT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183917_CCTAGTAT_L001_17592_1 lane1_3600STDY6183918_CCACCGAT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183919_CTTCACAT_L001_17592_1 lane1_3600STDY6183920_CTATCATG_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183921_CATGAATG_L001_17592_1 lane1_3600STDY6183922_CCACTTGG_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183923_CTGTACGG_L001_17592_1 lane1_3600STDY6183924_CTAGATAG_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183925_CACTCGAG_L001_17592_1 lane1_3600STDY6183926_CCGACAAG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183927_CTTGCTTC_L001_17592_1 lane1_3600STDY6183928_CATAGGTC_L001_17592_1 
#>                                      "0232"                                      "0212" 
#> lane1_3600STDY6183929_CACATTGC_L001_17592_1 lane1_3600STDY6183930_CGCTAAGC_L001_17592_1 
#>                                      "0232"                                       "033" 
#> lane1_3600STDY6183931_CAACCTCC_L001_17592_1 lane1_3600STDY6183932_CAGCTGAC_L001_17592_1 
#>                                       "033"                                      "0232" 
#> lane1_3600STDY6183933_CTCAAGAC_L001_17592_1 lane1_3600STDY6183934_CGTGTCAC_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6183935_CCATGCAC_L001_17592_1 lane1_3600STDY6183936_CGTTACTA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183937_CAAGTAGA_L001_17592_1 lane1_3600STDY6183938_CTCTCTCA_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183939_CGACTGCA_L001_17592_1 lane1_3600STDY6183940_CCTGAGCA_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183941_CAGGCTAA_L001_17592_1 lane1_3600STDY6183942_CGGAGGAA_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183943_AGGAGATT_L001_17592_1 lane1_3600STDY6183944_AGGCAGCT_L001_17592_1 
#>                                       "031"                                      "0213" 
#> lane1_3600STDY6183945_ACGTTCAT_L001_17592_1 lane1_3600STDY6183946_AACGTGTG_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183947_AGACCGTG_L001_17592_1 lane1_3600STDY6183948_ACCTCTGG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183949_ATCCTAGG_L001_17592_1 lane1_3600STDY6183950_ATCAACCG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183951_AGGTCACG_L001_17592_1 lane1_3600STDY6183952_ACTGTTAG_L001_17592_1 
#>                                       "031"                                      "0221" 
#> lane1_3600STDY6183953_AAGAGTAG_L001_17592_1 lane1_3600STDY6183954_ATTCGGAG_L001_17592_1 
#>                                      "0231"                                       "031" 
#> lane1_3600STDY6183955_ACGCAATC_L001_17592_1 lane1_3600STDY6183956_ACAAGTGC_L001_17592_1 
#>                                       "033"                                      "0232" 
#> lane1_3600STDY6183957_ATGGATCC_L001_17592_1 lane1_3600STDY6183958_AGAGGACC_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6183959_ATCTCCAC_L001_17592_1 lane1_3600STDY6183960_ATTGGCTA_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6183961_AATCCTGA_L001_17592_1 lane1_3600STDY6183962_AGGATTCA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183963_AACTGGCA_L001_17592_1 lane1_3600STDY6183964_ACAACGCA_L001_17592_1 
#>                                       "033"                                      "0223" 
#> lane1_3600STDY6183965_CGGAAACA_L001_17592_1 lane1_3600STDY6183966_AATGAATT_L001_17592_1 
#>                                      "0222"                                       "033" 
#> lane1_3600STDY6183967_TAGGACCC_L001_17592_1 lane1_3600STDY6183968_TCTCAGTG_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183969_CATGGGAA_L001_17592_1 lane1_3600STDY6183970_CCTAAGAT_L001_17592_1 
#>                                       "031"                                      "0232" 
#> lane1_3600STDY6183971_CTCAGATA_L001_17592_1 lane1_3600STDY6183972_CCCATAGG_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183973_GCTATGAC_L001_17592_1 lane1_3600STDY6183974_GCTGTGAA_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183975_ACCTTCAA_L001_17592_1 lane1_3600STDY6183976_ACAAAGCC_L001_17592_1 
#>                                      "0231"                                      "0211" 
#> lane1_3600STDY6183977_CAAAACCG_L001_17592_1 lane1_3600STDY6183978_GCTGGACA_L001_17592_1 
#>                                      "0232"                                      "0231" 
#> lane1_3600STDY6183979_AAGTCGTA_L001_17592_1 lane1_3600STDY6183980_CATCCGTA_L001_17592_1 
#>                                      "0232"                                      "0231" 
#> lane1_3600STDY6183981_TTGTGTCT_L001_17592_1 lane1_3600STDY6183982_TGCTCTAG_L001_17592_1 
#>                                      "0231"                                      "0232" 
#> lane1_3600STDY6183983_ACCCAACA_L001_17592_1 lane1_3600STDY6183984_CGATCTGA_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6183985_GTTCCACG_L001_17592_1 lane1_3600STDY6183986_ACTCTTTC_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6183987_TATTGGAG_L001_17592_1 lane1_3600STDY6183988_TAAACATA_L001_17592_1 
#>                                      "0231"                                      "0221" 
#> lane1_3600STDY6183989_GTAAGATA_L001_17592_1 lane1_3600STDY6183990_TACCGCAA_L001_17592_1 
#>                                      "0221"                                       "031" 
#> lane1_3600STDY6183991_TATCTCCT_L001_17592_1 lane1_3600STDY6183992_TGTCATCT_L001_17592_1 
#>                                       "031"                                      "0231" 
#> lane1_3600STDY6183993_ATAGCTCT_L001_17592_1 lane1_3600STDY6183994_AGTCCAAC_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6183995_TTTGGGCA_L001_17592_1 lane1_3600STDY6183996_TCTGACGC_L001_17592_1 
#>                                       "031"                                      "0231" 
#> lane1_3600STDY6183997_TGTCGACT_L001_17592_1 lane1_3600STDY6183998_GTCACGTA_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6183999_TTGAGCGA_L001_17592_1 lane1_3600STDY6184000_GAGACATA_L001_17592_1 
#>                                      "0231"                                       "031" 
#> lane1_3600STDY6184001_GTCAAGCT_L001_17592_1 lane1_3600STDY6184002_AGCAAGTT_L001_17592_1 
#>                                      "0221"                                       "031" 
#> lane1_3600STDY6184003_GACGCTCA_L001_17592_1 lane1_3600STDY6184004_ACGGCAGC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184005_AGAACTGA_L001_17592_1 lane1_3600STDY6184006_CGCCTTTG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184007_TAAGGTCA_L001_17592_1 lane1_3600STDY6184008_ACGTTGGC_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184009_CCAGCTTA_L001_17592_1 lane1_3600STDY6184010_GAATCCTA_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184011_ACTTCGTA_L001_17592_1 lane1_3600STDY6184012_TAGTCGGT_L001_17592_1 
#>                                      "0223"                                       "031" 
#> lane1_3600STDY6184013_CGCACGAG_L001_17592_1 lane1_3600STDY6184014_ACGTACTA_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6184015_AGCGCCAA_L001_17592_1 lane1_3600STDY6184016_GCCTGCCC_L001_17592_1 
#>                                       "031"                                      "0231" 
#> lane1_3600STDY6184017_AGGACGAT_L001_17592_1 lane1_3600STDY6184018_CTTGACCG_L001_17592_1 
#>                                       "031"                                      "0231" 
#> lane1_3600STDY6184019_AGGTCTAA_L001_17592_1 lane1_3600STDY6184020_CGAGATCC_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6184021_ATTAGCGG_L001_17592_1 lane1_3600STDY6184022_GCGCTGAT_L001_17592_1 
#>                                       "031"                                      "0231" 
#> lane1_3600STDY6184023_TGCTGAAC_L001_17592_1 lane1_3600STDY6184024_GAGGGCAG_L001_17592_1 
#>                                      "0221"                                       "031" 
#> lane1_3600STDY6184025_GTTTTCAC_L001_17592_1 lane1_3600STDY6184026_GAGATGCC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184027_TTGAGAAG_L001_17592_1 lane1_3600STDY6184028_GCATCCGG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184029_GTCACCAG_L001_17592_1 lane1_3600STDY6184030_GAGGTCGC_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184031_AAGGGGTA_L001_17592_1 lane1_3600STDY6184032_TTTTACGT_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184033_TTCCTACA_L001_17592_1 lane1_3600STDY6184034_AGTGTAGT_L001_17592_1 
#>                                       "031"                                      "0231" 
#> lane1_3600STDY6184035_GTGGCCAA_L001_17592_1 lane1_3600STDY6184036_AAATACTC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184037_CACCCGTC_L001_17592_1 lane1_3600STDY6184038_TCGTGGTT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184039_ACTTGGGG_L001_17592_1 lane1_3600STDY6184040_GGCTGCTT_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6184041_CAGGGTCG_L001_17592_1 lane1_3600STDY6184042_CTCGTCGA_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6184043_TCTACAGT_L001_17592_1 lane1_3600STDY6184044_CTTCTAGA_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6184045_AACGGCTT_L001_17592_1 lane1_3600STDY6184046_ATAAGACT_L001_17592_1 
#>                                       "031"                                      "0231" 
#> lane1_3600STDY6184047_GTTTTTCG_L001_17592_1 lane1_3600STDY6184048_ATTGGTAT_L001_17592_1 
#>                                      "0231"                                       "031" 
#> lane1_3600STDY6184049_CGCCAGTA_L001_17592_1 lane1_3600STDY6184050_AAGCCGAA_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184051_TGACCCAC_L001_17592_1 lane1_3600STDY6184052_ATTGCACA_L001_17592_1 
#>                                      "0231"                                       "031" 
#> lane1_3600STDY6184053_CTTTTGAT_L001_17592_1 lane1_3600STDY6184054_TAGCGAGA_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184055_TTCGCAGG_L001_17592_1 lane1_3600STDY6184056_TAGTTATT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184057_TCCTCCGA_L001_17592_1 lane1_3600STDY6184058_GCGGGTCT_L001_17592_1 
#>                                       "031"                                      "0231" 
#> lane1_3600STDY6184059_GATTCTAT_L001_17592_1 lane1_3600STDY6184060_ATGCAAAG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184061_GTCTGAGG_L001_17592_1 lane1_3600STDY6184062_TCTGGCGA_L001_17592_1 
#>                                      "0231"                                      "0232" 
#> lane1_3600STDY6184063_AATTTGCG_L001_17592_1 lane1_3600STDY6184064_TGGGTTGG_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6184065_AGTTGAAA_L001_17592_1 lane1_3600STDY6184066_GACCGGAA_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6184067_GATCGAAC_L001_17592_1 lane1_3600STDY6184068_GTATAGGG_L001_17592_1 
#>                                      "0222"                                      "0222" 
#> lane1_3600STDY6184069_GGTAAGAG_L001_17592_1 lane1_3600STDY6184070_AGTCCGAT_L001_17592_1 
#>                                      "0342"                                      "0232" 
#> lane1_3600STDY6184071_ATACAGGC_L001_17592_1 lane1_3600STDY6184072_TGAGACTC_L001_17592_1 
#>                                      "0232"                                       "033" 
#> lane1_3600STDY6184073_ACTCAGGA_L001_17592_1 lane1_3600STDY6184074_GTGTCTGA_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184075_CTTGAATC_L001_17592_1 lane1_3600STDY6184076_CCGCATGA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184077_AAGTAACA_L001_17592_1 lane1_3600STDY6184078_GTGGTACT_L001_17592_1 
#>                                       "033"                                      "0232" 
#> lane1_3600STDY6184079_AGCTGTGC_L001_17592_1 lane1_3600STDY6184080_TTACCTTC_L001_17592_1 
#>                                      "0222"                                       "033" 
#> lane1_3600STDY6184081_TCCGGGTA_L001_17592_1 lane1_3600STDY6184082_CTACGTAA_L001_17592_1 
#>                                      "0231"                                      "0232" 
#> lane1_3600STDY6184083_TCGGACCG_L001_17592_1 lane1_3600STDY6184084_ATGCGTCG_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184085_TTCTTAGC_L001_17592_1 lane1_3600STDY6184086_TGAGTAAG_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6184087_AAGTGATA_L001_17592_1 lane1_3600STDY6184088_TCGATGCG_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6184089_TATTCTGG_L001_17592_1 lane1_3600STDY6184090_AGCCGTGA_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6184091_AAGCCTTC_L001_17592_1 lane1_3600STDY6184092_AGGTATCC_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6184093_AGGATCTC_L001_17592_1 lane1_3600STDY6184094_CTGTTTGA_L001_17592_1 
#>                                       "033"                                      "0232" 
#> lane1_3600STDY6184095_GGAATTTC_L001_17592_1 lane1_3600STDY6184096_TTGGAGCA_L001_17592_1 
#>                                      "0231"                                       "031" 
#> lane1_3600STDY6184097_AAGGTCTG_L001_17592_1 lane1_3600STDY6184098_AATTAGGC_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184099_AATCGGGT_L001_17592_1 lane1_3600STDY6184100_AGGTAGAC_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184101_CTTATTCC_L001_17592_1 lane1_3600STDY6184102_CAGGCTCT_L001_17592_1 
#>                                       "033"                                      "0232" 
#> lane1_3600STDY6184103_AAAGCACG_L001_17592_1 lane1_3600STDY6184104_GTATACAC_L001_17592_1 
#>                                      "0232"                                      "0231" 
#> lane1_3600STDY6184105_GGACATAT_L001_17592_1 lane1_3600STDY6184106_CGGTTGGG_L001_17592_1 
#>                                      "0222"                                      "0231" 
#> lane1_3600STDY6184107_GTCCGTGA_L001_17592_1 lane1_3600STDY6184108_GCCGAACC_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184109_ACTTTACT_L001_17592_1 lane1_3600STDY6184110_GGGTCCAT_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184111_ATAACTAG_L001_17592_1 lane1_3600STDY6184112_AATAGAGA_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6184113_TCACCATT_L001_17592_1 lane1_3600STDY6184114_CGCCTGAT_L001_17592_1 
#>                                      "0231"                                      "0232" 
#> lane1_3600STDY6184115_GCGTGAAC_L001_17592_1 lane1_3600STDY6184116_TAAGGGTG_L001_17592_1 
#>                                      "0232"                                      "0232" 
#> lane1_3600STDY6184117_GGTGTCGA_L001_17592_1 lane1_3600STDY6184118_CCGTTAGG_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184119_TGGCAAAA_L001_17592_1 lane1_3600STDY6184120_CCTACCCG_L001_17592_1 
#>                                      "0231"                                       "031" 
#> lane1_3600STDY6184121_AACAGCGC_L001_17592_1 lane1_3600STDY6184122_TATACATC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184123_AAGCGACT_L001_17592_1 lane1_3600STDY6184124_GAAGCGCA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184125_ACCTCTAC_L001_17592_1 lane1_3600STDY6184126_GATTGCGT_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6184127_GCTGGTTG_L001_17592_1 lane1_3600STDY6184128_ATCGTCCT_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184129_GGACACGG_L001_17592_1 lane1_3600STDY6184130_CGCACCTA_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6184131_CTTCGGCT_L001_17592_1 lane1_3600STDY6184132_CGAATCGA_L001_17592_1 
#>                                       "031"                                      "0222" 
#> lane1_3600STDY6184133_TAACAACT_L001_17592_1 lane1_3600STDY6184134_AGCTCTTT_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6184135_TAATCCCT_L001_17592_1 lane1_3600STDY6184136_AGGACACT_L001_17592_1 
#>                                      "0231"                                      "0232" 
#> lane1_3600STDY6184137_TTACACTA_L001_17592_1 lane1_3600STDY6184138_AAACATCA_L001_17592_1 
#>                                       "033"                                      "0232" 
#> lane1_3600STDY6184139_CCATAGCT_L001_17592_1 lane1_3600STDY6184140_GTTATGGC_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6184141_ATCCCCTA_L001_17592_1 lane1_3600STDY6184142_CATACTAC_L001_17592_1 
#>                                      "0232"                                       "033" 
#> lane1_3600STDY6184143_CAATTGTT_L001_17592_1 lane1_3600STDY6184144_AAACCCGT_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6184145_CAGATTTC_L001_17592_1 lane1_3600STDY6184146_GCGTAGGT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184147_GGCATTCG_L001_17592_1 lane1_3600STDY6184148_TGGGGCTT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184149_CTGACTAC_L001_17592_1 lane1_3600STDY6184150_AACTTTTA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184151_AGGGATTC_L001_17592_1 lane1_3600STDY6184152_CCGAGTAG_L001_17592_1 
#>                                      "0231"                                       "033" 
#> lane1_3600STDY6184153_GGGGACTA_L001_17592_1 lane1_3600STDY6184154_GGAGTTGA_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6184155_AGCTCATC_L001_17592_1 lane1_3600STDY6184156_TAATCAAC_L001_17592_1 
#>                                       "031"                                      "0221" 
#> lane1_3600STDY6184157_ACTGGTCG_L001_17592_1 lane1_3600STDY6184158_GACGATTG_L001_17592_1 
#>                                       "031"                                      "0231" 
#> lane1_3600STDY6184159_AGCGATGA_L001_17592_1 lane1_3600STDY6184160_GAAGAGAT_L001_17592_1 
#>                                       "033"                                      "0231" 
#> lane1_3600STDY6184161_CGTATGCA_L001_17592_1 lane1_3600STDY6184162_CACGTGCG_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184163_GCTTAAAC_L001_17592_1 lane1_3600STDY6184164_GTTCCGCA_L001_17592_1 
#>                                      "0231"                                      "0231" 
#> lane1_3600STDY6184165_GTATCGTC_L001_17592_1 lane1_3600STDY6184166_GTCCTCAC_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184167_GTACGGAC_L001_17592_1 lane1_3600STDY6184168_CATTTTGC_L001_17592_1 
#>                                      "0231"                                       "031" 
#> lane1_3600STDY6184169_TCCTCTCT_L001_17592_1 lane1_3600STDY6184170_AGCAACGA_L001_17592_1 
#>                                      "0341"                                      "0231" 
#> lane1_3600STDY6184171_ACAGAAGA_L001_17592_1 lane1_3600STDY6184172_CGACCCTT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184173_CTGCCTAG_L001_17592_1 lane1_3600STDY6184174_GAGCGCAT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184175_AACTTATC_L001_17592_1 lane1_3600STDY6184176_CCGATGTA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184177_TTACTACC_L001_17592_1 lane1_3600STDY6184178_CAAGGAGC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184179_TGGTTGAC_L001_17592_1 lane1_3600STDY6184180_ACCTGCTG_L001_17592_1 
#>                                       "031"                                      "0221"

show/hide code output

get_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 1764))
#> lane1_3600STDY6077864_ATCACGTT_L001_15986_1 lane1_3600STDY6077865_CGATGTTT_L001_15986_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6077866_TTAGGCAT_L001_15986_1 lane1_3600STDY6077867_TGACCACT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077868_ACAGTGGT_L001_15986_1 lane1_3600STDY6077869_GCCAATGT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077870_CAGATCTG_L001_15986_1 lane1_3600STDY6077871_ACTTGATG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077872_GATCAGCG_L001_15986_1 lane1_3600STDY6077873_TAGCTTGT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077874_GGCTACAG_L001_15986_1 lane1_3600STDY6077875_CTTGTACT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077876_TGGTTGTT_L001_15986_1 lane1_3600STDY6077877_TCTCGGTT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077878_TAAGCGTT_L001_15986_1 lane1_3600STDY6077879_TCCGTCTT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077880_TGTACCTT_L001_15986_1 lane1_3600STDY6077881_TTCTGTGT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077882_TCTGCTGT_L001_15986_1 lane1_3600STDY6077883_TTGGAGGT_L001_15986_1 
#>                                      "0121"                                      "0221" 
#> lane1_3600STDY6077884_TCGAGCGT_L001_15986_1 lane1_3600STDY6077885_TGATACGT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077886_TGCATAGT_L001_15986_1 lane1_3600STDY6077887_TTGACTCT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077888_TGCGATCT_L001_15986_1 lane1_3600STDY6077889_TTCCTGCT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077890_TAGTGACT_L001_15986_1 lane1_3600STDY6077891_TACAGGAT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077892_TCCTCAAT_L001_15986_1 lane1_3600STDY6077893_TGTGGTTG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077894_TAGTCTTG_L001_15986_1 lane1_3600STDY6077895_TTCCATTG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077896_TCGAAGTG_L001_15986_1 lane1_3600STDY6077897_TAACGCTG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077898_TTGGTATG_L001_15986_1 lane1_3600STDY6077899_TGAACTGG_L001_15986_1 
#>                                      "0121"                                      "0221" 
#> lane1_3600STDY6077900_TACTTCGG_L001_15986_1 lane1_3600STDY6077901_TCTCACGG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077902_TCAGGAGG_L001_15986_1 lane1_3600STDY6077903_TAAGTTCG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077904_TCCAGTCG_L001_15986_1 lane1_3600STDY6077905_TGTATGCG_L001_15986_1 
#>                                      "0221"                                      "0121" 
#> lane1_3600STDY6077906_TCATTGAG_L001_15986_1 lane1_3600STDY6077907_TGGCTCAG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077908_TATGCCAG_L001_15986_1 lane1_3600STDY6077909_TCAGATTC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077910_TACTAGTC_L001_15986_1 lane1_3600STDY6077911_TTCAGCTC_L001_15986_1 
#>                                      "0121"                                      "0221" 
#> lane1_3600STDY6077912_TGTCTATC_L001_15986_1 lane1_3600STDY6077913_TATGTGGC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077914_TTACTCGC_L001_15986_1 lane1_3600STDY6077915_TCGTTAGC_L001_15986_1 
#>                                      "0221"                                      "0121" 
#> lane1_3600STDY6077916_TACCGAGC_L001_15986_1 lane1_3600STDY6077917_TGTTCTCC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077918_TTCGCACC_L001_15986_1 lane1_3600STDY6077919_TTGCGTAC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077920_TCTACGAC_L001_15986_1 lane1_3600STDY6077921_TGACAGAC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077922_TAGAACAC_L001_15986_1 lane1_3600STDY6077923_TCATCCTA_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077924_TGCTGATA_L001_15986_1 lane1_3600STDY6077925_TAGACGGA_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077926_TGTGAAGA_L001_15986_1 lane1_3600STDY6077927_TCTCTTCA_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077928_TTGTTCCA_L001_15986_1 lane1_3600STDY6077929_TGAAGCCA_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077930_TACCACCA_L001_15986_1 lane1_3600STDY6077931_TGCGTGAA_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077932_GGTGAGTT_L001_15986_1 lane1_3600STDY6077933_GATCTCTT_L001_15986_1 
#>                                      "0121"                                      "0221" 
#> lane1_3600STDY6077934_GTGTCCTT_L001_15986_1 lane1_3600STDY6077935_GACGGATT_L001_15986_1 
#>                                      "0221"                                      "0121" 
#> lane1_3600STDY6077936_GCAACATT_L001_15986_1 lane1_3600STDY6077937_GGTCGTGT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077938_GAATCTGT_L001_15986_1 lane1_3600STDY6077939_GTACATCT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077940_GAGGTGCT_L001_15986_1 lane1_3600STDY6077941_GCATGGCT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077942_GTTAGCCT_L001_15986_1 lane1_3600STDY6077943_GTCGCTAT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077944_GGAATGAT_L001_15986_1 lane1_3600STDY6077945_GAGCCAAT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077946_GCTCCTTG_L001_15986_1 lane1_3600STDY6077947_GTAAGGTG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077948_GAGGATGG_L001_15986_1 lane1_3600STDY6077949_GTTGTCGG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077950_GGATTAGG_L001_15986_1 lane1_3600STDY6077951_GATAGAGG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077952_GTGTGTCG_L001_15986_1 lane1_3600STDY6077953_GCAATCCG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077954_GACCTTAG_L001_15986_1 lane1_3600STDY6077955_GCCTGTTC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077956_GCACTGTC_L001_15986_1 lane1_3600STDY6077957_GCTAACTC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077958_GATTCATC_L001_15986_1 lane1_3600STDY6077959_GTCTTGGC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane3_3600STDY6077960_ATCACGTT_L003_15987_1 lane3_3600STDY6077961_CGATGTTT_L003_15987_1 
#>                                      "0221"                                      "0221" 
#> lane3_3600STDY6077962_TTAGGCAT_L003_15987_1 lane3_3600STDY6077963_TGACCACT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077964_ACAGTGGT_L003_15987_1 lane3_3600STDY6077965_GCCAATGT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077966_CAGATCTG_L003_15987_1 lane3_3600STDY6077967_ACTTGATG_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077968_GATCAGCG_L003_15987_1 lane3_3600STDY6077969_TAGCTTGT_L003_15987_1 
#>                                      "0122"                                     "01233" 
#> lane3_3600STDY6077970_GGCTACAG_L003_15987_1 lane3_3600STDY6077971_CTTGTACT_L003_15987_1 
#>                                     "01232"                                     "01232" 
#> lane3_3600STDY6077972_TGGTTGTT_L003_15987_1 lane3_3600STDY6077973_TCTCGGTT_L003_15987_1 
#>                                     "01233"                                      "0122" 
#> lane3_3600STDY6077974_TAAGCGTT_L003_15987_1 lane3_3600STDY6077975_TCCGTCTT_L003_15987_1 
#>                                     "01231"                                     "01231" 
#> lane3_3600STDY6077976_TGTACCTT_L003_15987_1 lane3_3600STDY6077977_TTCTGTGT_L003_15987_1 
#>                                     "01232"                                      "0122" 
#> lane3_3600STDY6077978_TCTGCTGT_L003_15987_1 lane3_3600STDY6077979_TTGGAGGT_L003_15987_1 
#>                                      "0224"                                      "0122" 
#> lane3_3600STDY6077980_TCGAGCGT_L003_15987_1 lane3_3600STDY6077981_TGATACGT_L003_15987_1 
#>                                      "0122"                                     "01233" 
#> lane3_3600STDY6077982_TGCATAGT_L003_15987_1 lane3_3600STDY6077983_TTGACTCT_L003_15987_1 
#>                                      "0122"                                     "01233" 
#> lane3_3600STDY6077984_TGCGATCT_L003_15987_1 lane3_3600STDY6077985_TTCCTGCT_L003_15987_1 
#>                                     "01233"                                      "0122" 
#> lane3_3600STDY6077986_TAGTGACT_L003_15987_1 lane3_3600STDY6077987_TACAGGAT_L003_15987_1 
#>                                     "01233"                                     "01231" 
#> lane3_3600STDY6077988_TCCTCAAT_L003_15987_1 lane3_3600STDY6077989_TGTGGTTG_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077990_TAGTCTTG_L003_15987_1 lane3_3600STDY6077991_TTCCATTG_L003_15987_1 
#>                                      "0122"                                     "01233" 
#> lane3_3600STDY6077992_TCGAAGTG_L003_15987_1 lane3_3600STDY6077993_TAACGCTG_L003_15987_1 
#>                                      "0122"                                     "01231" 
#> lane3_3600STDY6077994_TTGGTATG_L003_15987_1 lane3_3600STDY6077995_TGAACTGG_L003_15987_1 
#>                                     "01231"                                     "01231" 
#> lane3_3600STDY6077996_TACTTCGG_L003_15987_1 lane3_3600STDY6077997_TCTCACGG_L003_15987_1 
#>                                      "0122"                                      "0224" 
#> lane3_3600STDY6077998_TCAGGAGG_L003_15987_1 lane3_3600STDY6077999_TAAGTTCG_L003_15987_1 
#>                                     "01231"                                     "01231" 
#> lane3_3600STDY6078000_TCCAGTCG_L003_15987_1 lane3_3600STDY6078001_TGTATGCG_L003_15987_1 
#>                                      "0122"                                      "0221" 
#> lane3_3600STDY6078002_TCATTGAG_L003_15987_1 lane3_3600STDY6078003_TGGCTCAG_L003_15987_1 
#>                                      "0342"                                      "0122" 
#> lane3_3600STDY6078004_TATGCCAG_L003_15987_1 lane3_3600STDY6078005_TCAGATTC_L003_15987_1 
#>                                      "0122"                                     "01231" 
#> lane3_3600STDY6078006_TACTAGTC_L003_15987_1 lane3_3600STDY6078007_TTCAGCTC_L003_15987_1 
#>                                     "01231"                                      "0122" 
#> lane3_3600STDY6078008_TGTCTATC_L003_15987_1 lane3_3600STDY6078009_TATGTGGC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078010_TTACTCGC_L003_15987_1 lane3_3600STDY6078011_TCGTTAGC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078012_TACCGAGC_L003_15987_1 lane3_3600STDY6078013_TGTTCTCC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078014_TTCGCACC_L003_15987_1 lane3_3600STDY6078015_TTGCGTAC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078016_TCTACGAC_L003_15987_1 lane3_3600STDY6078017_TGACAGAC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078018_TAGAACAC_L003_15987_1 lane3_3600STDY6078019_TCATCCTA_L003_15987_1 
#>                                     "01233"                                     "01233" 
#> lane3_3600STDY6078020_TGCTGATA_L003_15987_1 lane3_3600STDY6078021_TAGACGGA_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078022_TGTGAAGA_L003_15987_1 lane3_3600STDY6078023_TCTCTTCA_L003_15987_1 
#>                                     "01231"                                     "01233" 
#> lane3_3600STDY6078024_TTGTTCCA_L003_15987_1 lane3_3600STDY6078025_TGAAGCCA_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078026_TACCACCA_L003_15987_1 lane3_3600STDY6078027_TGCGTGAA_L003_15987_1 
#>                                     "01233"                                      "0221" 
#> lane3_3600STDY6078028_GGTGAGTT_L003_15987_1 lane3_3600STDY6078029_GATCTCTT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078030_GTGTCCTT_L003_15987_1 lane3_3600STDY6078031_GACGGATT_L003_15987_1 
#>                                     "01231"                                     "01232" 
#> lane3_3600STDY6078032_GCAACATT_L003_15987_1 lane3_3600STDY6078033_GGTCGTGT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078034_GAATCTGT_L003_15987_1 lane3_3600STDY6078035_GTACATCT_L003_15987_1 
#>                                      "0122"                                     "01233" 
#> lane3_3600STDY6078036_GAGGTGCT_L003_15987_1 lane3_3600STDY6078037_GCATGGCT_L003_15987_1 
#>                                     "01231"                                      "0122" 
#> lane3_3600STDY6078038_GTTAGCCT_L003_15987_1 lane3_3600STDY6078039_GTCGCTAT_L003_15987_1 
#>                                     "01233"                                     "01233" 
#> lane3_3600STDY6078040_GGAATGAT_L003_15987_1 lane3_3600STDY6078041_GAGCCAAT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078042_GCTCCTTG_L003_15987_1 lane3_3600STDY6078043_GTAAGGTG_L003_15987_1 
#>                                     "01231"                                     "01232" 
#> lane3_3600STDY6078044_GAGGATGG_L003_15987_1 lane3_3600STDY6078045_GTTGTCGG_L003_15987_1 
#>                                     "01232"                                     "01232" 
#> lane3_3600STDY6078046_GGATTAGG_L003_15987_1 lane3_3600STDY6078047_GATAGAGG_L003_15987_1 
#>                                     "01232"                                     "01232" 
#> lane3_3600STDY6078048_GTGTGTCG_L003_15987_1 lane3_3600STDY6078049_GCAATCCG_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078050_GACCTTAG_L003_15987_1 lane3_3600STDY6078051_GCCTGTTC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078052_GCACTGTC_L003_15987_1 lane3_3600STDY6078053_GCTAACTC_L003_15987_1 
#>                                      "0122"                                     "01232" 
#> lane3_3600STDY6078054_GATTCATC_L003_15987_1 lane3_3600STDY6078055_GTCTTGGC_L003_15987_1 
#>                                     "01232"                                     "01232" 
#> lane1_3600STDY6167693_ATCACGTT_L001_17236_1 lane1_3600STDY6167694_CGATGTTT_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167695_TTAGGCAT_L001_17236_1 lane1_3600STDY6167696_TGACCACT_L001_17236_1 
#>                                      "0342"                                      "0112" 
#> lane1_3600STDY6167697_ACAGTGGT_L001_17236_1 lane1_3600STDY6167698_GCCAATGT_L001_17236_1 
#>                                      "0224"                                      "0113" 
#> lane1_3600STDY6167699_CAGATCTG_L001_17236_1 lane1_3600STDY6167700_ACTTGATG_L001_17236_1 
#>                                      "0113"                                      "0221" 
#> lane1_3600STDY6167701_GATCAGCG_L001_17236_1 lane1_3600STDY6167702_TAGCTTGT_L001_17236_1 
#>                                      "0113"                                       "014" 
#> lane1_3600STDY6167703_GGCTACAG_L001_17236_1 lane1_3600STDY6167704_CTTGTACT_L001_17236_1 
#>                                       "014"                                      "0342" 
#> lane1_3600STDY6167705_TGGTTGTT_L001_17236_1 lane1_3600STDY6167706_TCTCGGTT_L001_17236_1 
#>                                       "014"                                      "0221" 
#> lane1_3600STDY6167707_TAAGCGTT_L001_17236_1 lane1_3600STDY6167708_TCCGTCTT_L001_17236_1 
#>                                      "0221"                                       "013" 
#> lane1_3600STDY6167709_TGTACCTT_L001_17236_1 lane1_3600STDY6167710_TTCTGTGT_L001_17236_1 
#>                                      "0113"                                      "0221" 
#> lane1_3600STDY6167711_TCTGCTGT_L001_17236_1 lane1_3600STDY6167712_TTGGAGGT_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167713_TCGAGCGT_L001_17236_1 lane1_3600STDY6167714_TGATACGT_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167715_TGCATAGT_L001_17236_1 lane1_3600STDY6167716_TTGACTCT_L001_17236_1 
#>                                      "0113"                                       "013" 
#> lane1_3600STDY6167717_TGCGATCT_L001_17236_1 lane1_3600STDY6167718_TTCCTGCT_L001_17236_1 
#>                                       "013"                                      "0221" 
#> lane1_3600STDY6167719_TAGTGACT_L001_17236_1 lane1_3600STDY6167720_TACAGGAT_L001_17236_1 
#>                                      "0342"                                      "0342" 
#> lane1_3600STDY6167721_TCCTCAAT_L001_17236_1 lane1_3600STDY6167722_TGTGGTTG_L001_17236_1 
#>                                      "0342"                                      "0113" 
#> lane1_3600STDY6167723_TAGTCTTG_L001_17236_1 lane1_3600STDY6167724_TTCCATTG_L001_17236_1 
#>                                      "0113"                                      "0221" 
#> lane1_3600STDY6167725_TCGAAGTG_L001_17236_1 lane1_3600STDY6167726_TAACGCTG_L001_17236_1 
#>                                      "0113"                                       "014" 
#> lane1_3600STDY6167727_TTGGTATG_L001_17236_1 lane1_3600STDY6167728_TGAACTGG_L001_17236_1 
#>                                       "013"                                      "0121" 
#> lane1_3600STDY6167729_TACTTCGG_L001_17236_1 lane1_3600STDY6167730_TCTCACGG_L001_17236_1 
#>                                      "0111"                                       "014" 
#> lane1_3600STDY6167731_TCAGGAGG_L001_17236_1 lane1_3600STDY6167732_TAAGTTCG_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6167733_TCCAGTCG_L001_17236_1 lane1_3600STDY6167734_TGTATGCG_L001_17236_1 
#>                                      "0113"                                      "0221" 
#> lane1_3600STDY6167735_TCATTGAG_L001_17236_1 lane1_3600STDY6167736_TGGCTCAG_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167737_TATGCCAG_L001_17236_1 lane1_3600STDY6167738_TCAGATTC_L001_17236_1 
#>                                      "0113"                                       "013" 
#> lane1_3600STDY6167739_TACTAGTC_L001_17236_1 lane1_3600STDY6167740_TTCAGCTC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167741_TGTCTATC_L001_17236_1 lane1_3600STDY6167742_TATGTGGC_L001_17236_1 
#>                                      "0113"                                       "013" 
#> lane1_3600STDY6167743_TTACTCGC_L001_17236_1 lane1_3600STDY6167744_TCGTTAGC_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167745_TACCGAGC_L001_17236_1 lane1_3600STDY6167746_TGTTCTCC_L001_17236_1 
#>                                      "0342"                                      "0111" 
#> lane1_3600STDY6167747_TTCGCACC_L001_17236_1 lane1_3600STDY6167748_TTGCGTAC_L001_17236_1 
#>                                      "0342"                                      "0111" 
#> lane1_3600STDY6167749_TCTACGAC_L001_17236_1 lane1_3600STDY6167750_TGACAGAC_L001_17236_1 
#>                                      "0111"                                      "0113" 
#> lane1_3600STDY6167751_TAGAACAC_L001_17236_1 lane1_3600STDY6167752_TCATCCTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167753_TGCTGATA_L001_17236_1 lane1_3600STDY6167754_TAGACGGA_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167755_TGTGAAGA_L001_17236_1 lane1_3600STDY6167756_TCTCTTCA_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6167757_TTGTTCCA_L001_17236_1 lane1_3600STDY6167758_TGAAGCCA_L001_17236_1 
#>                                      "0111"                                      "0221" 
#> lane1_3600STDY6167759_TACCACCA_L001_17236_1 lane1_3600STDY6167760_TGCGTGAA_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6167761_GGTGAGTT_L001_17236_1 lane1_3600STDY6167762_GATCTCTT_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167763_GTGTCCTT_L001_17236_1 lane1_3600STDY6167764_GACGGATT_L001_17236_1 
#>                                      "0112"                                       "013" 
#> lane1_3600STDY6167765_GCAACATT_L001_17236_1 lane1_3600STDY6167766_GGTCGTGT_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6167767_GAATCTGT_L001_17236_1 lane1_3600STDY6167768_GTACATCT_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167769_GAGGTGCT_L001_17236_1 lane1_3600STDY6167770_GCATGGCT_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167771_GTTAGCCT_L001_17236_1 lane1_3600STDY6167772_GTCGCTAT_L001_17236_1 
#>                                      "0112"                                      "0111" 
#> lane1_3600STDY6167773_GGAATGAT_L001_17236_1 lane1_3600STDY6167774_GAGCCAAT_L001_17236_1 
#>                                      "0112"                                      "0113" 
#> lane1_3600STDY6167775_GCTCCTTG_L001_17236_1 lane1_3600STDY6167776_GTAAGGTG_L001_17236_1 
#>                                      "0111"                                      "0221" 
#> lane1_3600STDY6167777_GAGGATGG_L001_17236_1 lane1_3600STDY6167778_GTTGTCGG_L001_17236_1 
#>                                      "0112"                                      "0221" 
#> lane1_3600STDY6167779_GGATTAGG_L001_17236_1 lane1_3600STDY6167780_GATAGAGG_L001_17236_1 
#>                                      "0113"                                      "0112" 
#> lane1_3600STDY6167781_GTGTGTCG_L001_17236_1 lane1_3600STDY6167782_GCAATCCG_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167783_GACCTTAG_L001_17236_1 lane1_3600STDY6167784_GCCTGTTC_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167785_GCACTGTC_L001_17236_1 lane1_3600STDY6167786_GCTAACTC_L001_17236_1 
#>                                      "0112"                                      "0111" 
#> lane1_3600STDY6167787_GATTCATC_L001_17236_1 lane1_3600STDY6167788_GTCTTGGC_L001_17236_1 
#>                                      "0112"                                      "0221" 
#> lane1_3600STDY6167789_GTAGAAGC_L001_17236_1 lane1_3600STDY6167790_GATGGTCC_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6167791_GTGCTACC_L001_17236_1 lane1_3600STDY6167792_GCGATTAC_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167793_GGTTGGAC_L001_17236_1 lane1_3600STDY6167794_GGCACAAC_L001_17236_1 
#>                                      "0112"                                      "0111" 
#> lane1_3600STDY6167795_GACACTTA_L001_17236_1 lane1_3600STDY6167796_GTGCAGTA_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167797_GGAGTCTA_L001_17236_1 lane1_3600STDY6167798_GCTATGGA_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6167799_GAGTGCGA_L001_17236_1 lane1_3600STDY6167800_GTAACCGA_L001_17236_1 
#>                                      "0342"                                      "0111" 
#> lane1_3600STDY6167801_GGCAAGCA_L001_17236_1 lane1_3600STDY6167802_GCCTTACA_L001_17236_1 
#>                                      "0112"                                       "013" 
#> lane1_3600STDY6167803_GAACGACA_L001_17236_1 lane1_3600STDY6167804_GCAGGTAA_L001_17236_1 
#>                                       "013"                                      "0111" 
#> lane1_3600STDY6167805_GCGTCGAA_L001_17236_1 lane1_3600STDY6167806_CGTTCGGT_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6167807_CACCAGGT_L001_17236_1 lane1_3600STDY6167808_CTGCGAGT_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6167809_CCGTATCT_L001_17236_1 lane1_3600STDY6167810_CGCTTCCT_L001_17236_1 
#>                                      "0111"                                      "0222" 
#> lane1_3600STDY6167811_CAAGACCT_L001_17236_1 lane1_3600STDY6167812_CACACACT_L001_17236_1 
#>                                      "0111"                                       "014" 
#> lane1_3600STDY6167813_CCTAGTAT_L001_17236_1 lane1_3600STDY6167814_CCACCGAT_L001_17236_1 
#>                                      "0221"                                      "0112" 
#> lane1_3600STDY6167815_CTTCACAT_L001_17236_1 lane1_3600STDY6167816_CTATCATG_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167817_CATGAATG_L001_17236_1 lane1_3600STDY6167818_CCACTTGG_L001_17236_1 
#>                                      "0342"                                      "0111" 
#> lane1_3600STDY6167819_CTGTACGG_L001_17236_1 lane1_3600STDY6167820_CTAGATAG_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167821_CACTCGAG_L001_17236_1 lane1_3600STDY6167822_CCGACAAG_L001_17236_1 
#>                                      "0342"                                       "013" 
#> lane1_3600STDY6167823_CTTGCTTC_L001_17236_1 lane1_3600STDY6167824_CATAGGTC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167825_CACATTGC_L001_17236_1 lane1_3600STDY6167826_CGCTAAGC_L001_17236_1 
#>                                      "0111"                                       "014" 
#> lane1_3600STDY6167827_CAACCTCC_L001_17236_1 lane1_3600STDY6167828_CAGCTGAC_L001_17236_1 
#>                                       "013"                                      "0111" 
#> lane1_3600STDY6167829_CTCAAGAC_L001_17236_1 lane1_3600STDY6167830_CGTGTCAC_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167831_CCATGCAC_L001_17236_1 lane1_3600STDY6167832_CGTTACTA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167833_CAAGTAGA_L001_17236_1 lane1_3600STDY6167834_CTCTCTCA_L001_17236_1 
#>                                      "0111"                                      "0113" 
#> lane1_3600STDY6167835_CGACTGCA_L001_17236_1 lane1_3600STDY6167836_CCTGAGCA_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6167837_CAGGCTAA_L001_17236_1 lane1_3600STDY6167838_CGGAGGAA_L001_17236_1 
#>                                       "014"                                      "0113" 
#> lane1_3600STDY6167839_AGGAGATT_L001_17236_1 lane1_3600STDY6167840_AGGCAGCT_L001_17236_1 
#>                                       "013"                                      "0111" 
#> lane1_3600STDY6167841_ACGTTCAT_L001_17236_1 lane1_3600STDY6167842_AACGTGTG_L001_17236_1 
#>                                      "0342"                                       "013" 
#> lane1_3600STDY6167843_AGACCGTG_L001_17236_1 lane1_3600STDY6167844_ACCTCTGG_L001_17236_1 
#>                                      "0342"                                      "0221" 
#> lane1_3600STDY6167845_ATCCTAGG_L001_17236_1 lane1_3600STDY6167846_ATCAACCG_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167847_AGGTCACG_L001_17236_1 lane1_3600STDY6167848_ACTGTTAG_L001_17236_1 
#>                                      "0221"                                       "013" 
#> lane1_3600STDY6167849_AAGAGTAG_L001_17236_1 lane1_3600STDY6167850_ATTCGGAG_L001_17236_1 
#>                                       "013"                                       "014" 
#> lane1_3600STDY6167851_ACGCAATC_L001_17236_1 lane1_3600STDY6167852_ACAAGTGC_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167853_ATGGATCC_L001_17236_1 lane1_3600STDY6167854_AGAGGACC_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167855_ATCTCCAC_L001_17236_1 lane1_3600STDY6167856_ATTGGCTA_L001_17236_1 
#>                                      "0111"                                      "0113" 
#> lane1_3600STDY6167857_AATCCTGA_L001_17236_1 lane1_3600STDY6167858_AGGATTCA_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6167859_AACTGGCA_L001_17236_1 lane1_3600STDY6167860_ACAACGCA_L001_17236_1 
#>                                       "013"                                      "0112" 
#> lane1_3600STDY6167861_CGGAAACA_L001_17236_1 lane1_3600STDY6167862_AATGAATT_L001_17236_1 
#>                                      "0221"                                       "014" 
#> lane1_3600STDY6167863_TAGGACCC_L001_17236_1 lane1_3600STDY6167864_TCTCAGTG_L001_17236_1 
#>                                      "0113"                                      "0111" 
#> lane1_3600STDY6167865_CATGGGAA_L001_17236_1 lane1_3600STDY6167866_CCTAAGAT_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167867_CTCAGATA_L001_17236_1 lane1_3600STDY6167868_CCCATAGG_L001_17236_1 
#>                                      "0111"                                       "014" 
#> lane1_3600STDY6167869_GCTATGAC_L001_17236_1 lane1_3600STDY6167870_GCTGTGAA_L001_17236_1 
#>                                      "0111"                                      "0221" 
#> lane1_3600STDY6167871_ACCTTCAA_L001_17236_1 lane1_3600STDY6167872_ACAAAGCC_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6167873_CAAAACCG_L001_17236_1 lane1_3600STDY6167874_GCTGGACA_L001_17236_1 
#>                                      "0221"                                       "014" 
#> lane1_3600STDY6167875_AAGTCGTA_L001_17236_1 lane1_3600STDY6167876_CATCCGTA_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6167877_TTGTGTCT_L001_17236_1 lane1_3600STDY6167878_TGCTCTAG_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6167879_ACCCAACA_L001_17236_1 lane1_3600STDY6167880_CGATCTGA_L001_17236_1 
#>                                      "0221"                                      "0112" 
#> lane1_3600STDY6167881_GTTCCACG_L001_17236_1 lane1_3600STDY6167882_ACTCTTTC_L001_17236_1 
#>                                      "0111"                                       "013" 
#> lane1_3600STDY6167883_TATTGGAG_L001_17236_1 lane1_3600STDY6167884_TAAACATA_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6167885_GTAAGATA_L001_17236_1 lane1_3600STDY6167886_TACCGCAA_L001_17236_1 
#>                                      "0342"                                       "013" 
#> lane1_3600STDY6167887_TATCTCCT_L001_17236_1 lane1_3600STDY6167888_TGTCATCT_L001_17236_1 
#>                                      "0342"                                      "0111" 
#> lane1_3600STDY6167889_ATAGCTCT_L001_17236_1 lane1_3600STDY6167890_AGTCCAAC_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167891_TTTGGGCA_L001_17236_1 lane1_3600STDY6167892_TCTGACGC_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167893_TGTCGACT_L001_17236_1 lane1_3600STDY6167894_GTCACGTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167895_TTGAGCGA_L001_17236_1 lane1_3600STDY6167896_GAGACATA_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167897_GTCAAGCT_L001_17236_1 lane1_3600STDY6167898_AGCAAGTT_L001_17236_1 
#>                                       "023"                                      "0342" 
#> lane1_3600STDY6167899_GACGCTCA_L001_17236_1 lane1_3600STDY6167900_ACGGCAGC_L001_17236_1 
#>                                      "0112"                                      "0342" 
#> lane1_3600STDY6167901_AGAACTGA_L001_17236_1 lane1_3600STDY6167902_CGCCTTTG_L001_17236_1 
#>                                      "0342"                                      "0112" 
#> lane1_3600STDY6167903_TAAGGTCA_L001_17236_1 lane1_3600STDY6167904_ACGTTGGC_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167905_CCAGCTTA_L001_17236_1 lane1_3600STDY6167906_GAATCCTA_L001_17236_1 
#>                                      "0113"                                      "0111" 
#> lane1_3600STDY6167907_ACTTCGTA_L001_17236_1 lane1_3600STDY6167908_TAGTCGGT_L001_17236_1 
#>                                       "013"                                      "0221" 
#> lane1_3600STDY6167909_CGCACGAG_L001_17236_1 lane1_3600STDY6167910_ACGTACTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167911_AGCGCCAA_L001_17236_1 lane1_3600STDY6167912_GCCTGCCC_L001_17236_1 
#>                                      "0113"                                      "0113" 
#> lane1_3600STDY6167913_AGGACGAT_L001_17236_1 lane1_3600STDY6167914_CTTGACCG_L001_17236_1 
#>                                      "0111"                                      "0113" 
#> lane1_3600STDY6167915_AGGTCTAA_L001_17236_1 lane1_3600STDY6167916_CGAGATCC_L001_17236_1 
#>                                       "013"                                      "0111" 
#> lane1_3600STDY6167917_ATTAGCGG_L001_17236_1 lane1_3600STDY6167918_GCGCTGAT_L001_17236_1 
#>                                      "0111"                                      "0221" 
#> lane1_3600STDY6167919_TGCTGAAC_L001_17236_1 lane1_3600STDY6167920_GAGGGCAG_L001_17236_1 
#>                                       "014"                                      "0221" 
#> lane1_3600STDY6167921_GTTTTCAC_L001_17236_1 lane1_3600STDY6167922_GAGATGCC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167923_TTGAGAAG_L001_17236_1 lane1_3600STDY6167924_GCATCCGG_L001_17236_1 
#>                                       "013"                                      "0112" 
#> lane1_3600STDY6167925_GTCACCAG_L001_17236_1 lane1_3600STDY6167926_GAGGTCGC_L001_17236_1 
#>                                      "0112"                                      "0342" 
#> lane1_3600STDY6167927_AAGGGGTA_L001_17236_1 lane1_3600STDY6167928_TTTTACGT_L001_17236_1 
#>                                      "0113"                                      "0112" 
#> lane1_3600STDY6167929_TTCCTACA_L001_17236_1 lane1_3600STDY6167930_AGTGTAGT_L001_17236_1 
#>                                      "0111"                                       "013" 
#> lane1_3600STDY6167931_GTGGCCAA_L001_17236_1 lane1_3600STDY6167932_AAATACTC_L001_17236_1 
#>                                       "013"                                       "014" 
#> lane1_3600STDY6167933_CACCCGTC_L001_17236_1 lane1_3600STDY6167934_TCGTGGTT_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6167935_ACTTGGGG_L001_17236_1 lane1_3600STDY6167936_GGCTGCTT_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6167937_CAGGGTCG_L001_17236_1 lane1_3600STDY6167938_CTCGTCGA_L001_17236_1 
#>                                      "0112"                                      "0111" 
#> lane1_3600STDY6167939_TCTACAGT_L001_17236_1 lane1_3600STDY6167940_CTTCTAGA_L001_17236_1 
#>                                      "0112"                                      "0342" 
#> lane1_3600STDY6167941_AACGGCTT_L001_17236_1 lane1_3600STDY6167942_ATAAGACT_L001_17236_1 
#>                                      "0111"                                       "013" 
#> lane1_3600STDY6167943_GTTTTTCG_L001_17236_1 lane1_3600STDY6167944_ATTGGTAT_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167945_CGCCAGTA_L001_17236_1 lane1_3600STDY6167946_AAGCCGAA_L001_17236_1 
#>                                      "0113"                                      "0113" 
#> lane1_3600STDY6167947_TGACCCAC_L001_17236_1 lane1_3600STDY6167948_ATTGCACA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167949_CTTTTGAT_L001_17236_1 lane1_3600STDY6167950_TAGCGAGA_L001_17236_1 
#>                                      "0112"                                      "0221" 
#> lane1_3600STDY6167951_TTCGCAGG_L001_17236_1 lane1_3600STDY6167952_TAGTTATT_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167953_TCCTCCGA_L001_17236_1 lane1_3600STDY6167954_GCGGGTCT_L001_17236_1 
#>                                      "0111"                                      "0111" 
#> lane1_3600STDY6167955_GATTCTAT_L001_17236_1 lane1_3600STDY6167956_ATGCAAAG_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167957_GTCTGAGG_L001_17236_1 lane1_3600STDY6167958_TCTGGCGA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167959_AATTTGCG_L001_17236_1 lane1_3600STDY6167960_TGGGTTGG_L001_17236_1 
#>                                      "0111"                                      "0342" 
#> lane1_3600STDY6167961_AGTTGAAA_L001_17236_1 lane1_3600STDY6167962_GACCGGAA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167963_GATCGAAC_L001_17236_1 lane1_3600STDY6167964_GTATAGGG_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167965_GGTAAGAG_L001_17236_1 lane1_3600STDY6167966_AGTCCGAT_L001_17236_1 
#>                                      "0221"                                      "0112" 
#> lane1_3600STDY6167967_ATACAGGC_L001_17236_1 lane1_3600STDY6167968_TGAGACTC_L001_17236_1 
#>                                      "0111"                                      "0113" 
#> lane1_3600STDY6167969_ACTCAGGA_L001_17236_1 lane1_3600STDY6167970_GTGTCTGA_L001_17236_1 
#>                                      "0113"                                      "0342" 
#> lane1_3600STDY6167971_CTTGAATC_L001_17236_1 lane1_3600STDY6167972_CCGCATGA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167973_AAGTAACA_L001_17236_1 lane1_3600STDY6167974_GTGGTACT_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167975_AGCTGTGC_L001_17236_1 lane1_3600STDY6167976_TTACCTTC_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167977_TCCGGGTA_L001_17236_1 lane1_3600STDY6167978_CTACGTAA_L001_17236_1 
#>                                      "0112"                                      "0111" 
#> lane1_3600STDY6167979_TCGGACCG_L001_17236_1 lane1_3600STDY6167980_ATGCGTCG_L001_17236_1 
#>                                      "0111"                                       "013" 
#> lane1_3600STDY6167981_TTCTTAGC_L001_17236_1 lane1_3600STDY6167982_TGAGTAAG_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6167983_AAGTGATA_L001_17236_1 lane1_3600STDY6167984_TCGATGCG_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167985_TATTCTGG_L001_17236_1 lane1_3600STDY6167986_AGCCGTGA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167987_AAGCCTTC_L001_17236_1 lane1_3600STDY6167988_AGGTATCC_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167989_AGGATCTC_L001_17236_1 lane1_3600STDY6167990_CTGTTTGA_L001_17236_1 
#>                                      "0221"                                      "0111" 
#> lane1_3600STDY6167991_GGAATTTC_L001_17236_1 lane1_3600STDY6167992_TTGGAGCA_L001_17236_1 
#>                                       "013"                                      "0342" 
#> lane1_3600STDY6167993_AAGGTCTG_L001_17236_1 lane1_3600STDY6167994_AATTAGGC_L001_17236_1 
#>                                      "0342"                                      "0113" 
#> lane1_3600STDY6167995_AATCGGGT_L001_17236_1 lane1_3600STDY6167996_AGGTAGAC_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167997_CTTATTCC_L001_17236_1 lane1_3600STDY6167998_CAGGCTCT_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6167999_AAAGCACG_L001_17236_1 lane1_3600STDY6168000_GTATACAC_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6168001_GGACATAT_L001_17236_1 lane1_3600STDY6168002_CGGTTGGG_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6168003_GTCCGTGA_L001_17236_1 lane1_3600STDY6168004_GCCGAACC_L001_17236_1 
#>                                      "0111"                                       "013" 
#> lane1_3600STDY6168005_ACTTTACT_L001_17236_1 lane1_3600STDY6168006_GGGTCCAT_L001_17236_1 
#>                                      "0342"                                       "013" 
#> lane1_3600STDY6168007_ATAACTAG_L001_17236_1 lane1_3600STDY6168008_AATAGAGA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6168009_TCACCATT_L001_17236_1 lane1_3600STDY6168010_CGCCTGAT_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6168011_GCGTGAAC_L001_17236_1 lane1_3600STDY6168012_TAAGGGTG_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6168013_GGTGTCGA_L001_17236_1 lane1_3600STDY6168014_CCGTTAGG_L001_17236_1 
#>                                      "0112"                                       "013" 
#> lane1_3600STDY6168015_TGGCAAAA_L001_17236_1 lane1_3600STDY6168016_CCTACCCG_L001_17236_1 
#>                                      "0111"                                      "0222" 
#> lane1_3600STDY6168017_AACAGCGC_L001_17236_1 lane1_3600STDY6168018_TATACATC_L001_17236_1 
#>                                       "013"                                      "0221" 
#> lane1_3600STDY6168019_AAGCGACT_L001_17236_1 lane1_3600STDY6168020_GAAGCGCA_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6168021_ACCTCTAC_L001_17236_1 lane1_3600STDY6168022_GATTGCGT_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6168023_GCTGGTTG_L001_17236_1 lane1_3600STDY6168024_ATCGTCCT_L001_17236_1 
#>                                      "0221"                                      "0112" 
#> lane1_3600STDY6168025_GGACACGG_L001_17236_1 lane1_3600STDY6168026_CGCACCTA_L001_17236_1 
#>                                      "0112"                                      "0111" 
#> lane1_3600STDY6168027_CTTCGGCT_L001_17236_1 lane1_3600STDY6168028_CGAATCGA_L001_17236_1 
#>                                      "0111"                                       "014" 
#> lane1_3600STDY6168029_TAACAACT_L001_17236_1 lane1_3600STDY6168030_AGCTCTTT_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168031_TAATCCCT_L001_17236_1 lane1_3600STDY6168032_AGGACACT_L001_17236_1 
#>                                      "0113"                                      "0342" 
#> lane1_3600STDY6168033_TTACACTA_L001_17236_1 lane1_3600STDY6168034_AAACATCA_L001_17236_1 
#>                                      "0111"                                      "0113" 
#> lane1_3600STDY6168035_CCATAGCT_L001_17236_1 lane1_3600STDY6168036_GTTATGGC_L001_17236_1 
#>                                      "0111"                                      "0112" 
#> lane1_3600STDY6168037_ATCCCCTA_L001_17236_1 lane1_3600STDY6168038_CATACTAC_L001_17236_1 
#>                                      "0111"                                       "014" 
#> lane1_3600STDY6168039_CAATTGTT_L001_17236_1 lane1_3600STDY6168040_AAACCCGT_L001_17236_1 
#>                                       "014"                                      "0221" 
#> lane1_3600STDY6168041_CAGATTTC_L001_17236_1 lane1_3600STDY6168042_GCGTAGGT_L001_17236_1 
#>                                       "013"                                      "0113" 
#> lane1_3600STDY6168043_GGCATTCG_L001_17236_1 lane1_3600STDY6168044_TGGGGCTT_L001_17236_1 
#>                                      "0113"                                      "0112" 
#> lane1_3600STDY6168045_CTGACTAC_L001_17236_1 lane1_3600STDY6168046_AACTTTTA_L001_17236_1 
#>                                      "0112"                                      "0342" 
#> lane1_3600STDY6168047_AGGGATTC_L001_17236_1 lane1_3600STDY6168048_CCGAGTAG_L001_17236_1 
#>                                      "0112"                                      "0112" 
#> lane1_3600STDY6168049_GGGGACTA_L001_17236_1 lane1_3600STDY6168050_GGAGTTGA_L001_17236_1 
#>                                      "0113"                                      "0111" 
#> lane1_3600STDY6168051_AGCTCATC_L001_17236_1 lane1_3600STDY6168052_TAATCAAC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168053_ACTGGTCG_L001_17236_1 lane1_3600STDY6168054_GACGATTG_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168055_AGCGATGA_L001_17236_1 lane1_3600STDY6168056_GAAGAGAT_L001_17236_1 
#>                                      "0113"                                      "0342" 
#> lane1_3600STDY6168057_CGTATGCA_L001_17236_1 lane1_3600STDY6168058_CACGTGCG_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6168059_GCTTAAAC_L001_17236_1 lane1_3600STDY6168060_GTTCCGCA_L001_17236_1 
#>                                       "013"                                      "0111" 
#> lane1_3600STDY6168061_GTATCGTC_L001_17236_1 lane1_3600STDY6168062_GTCCTCAC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168063_GTACGGAC_L001_17236_1 lane1_3600STDY6168064_CATTTTGC_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6168065_TCCTCTCT_L001_17236_1 lane1_3600STDY6168066_AGCAACGA_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6168067_ACAGAAGA_L001_17236_1 lane1_3600STDY6168068_CGACCCTT_L001_17236_1 
#>                                       "013"                                      "0111" 
#> lane1_3600STDY6168069_CTGCCTAG_L001_17236_1 lane1_3600STDY6168070_GAGCGCAT_L001_17236_1 
#>                                      "0221"                                       "013" 
#> lane1_3600STDY6168071_AACTTATC_L001_17236_1 lane1_3600STDY6168072_CCGATGTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168073_TTACTACC_L001_17236_1 lane1_3600STDY6168074_CAAGGAGC_L001_17236_1 
#>                                       "013"                                       "014" 
#> lane1_3600STDY6168075_TGGTTGAC_L001_17236_1 lane1_3600STDY6168076_ACCTGCTG_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane4_3600STDY6184181_ATCACGTT_L004_17480_1 lane4_3600STDY6184182_CGATGTTT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184183_TTAGGCAT_L004_17480_1 lane4_3600STDY6184184_TGACCACT_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184185_ACAGTGGT_L004_17480_1 lane4_3600STDY6184186_GCCAATGT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184187_CAGATCTG_L004_17480_1 lane4_3600STDY6184188_ACTTGATG_L004_17480_1 
#>                                       "032"                                      "0211" 
#> lane4_3600STDY6184189_GATCAGCG_L004_17480_1 lane4_3600STDY6184190_TAGCTTGT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184191_GGCTACAG_L004_17480_1 lane4_3600STDY6184192_CTTGTACT_L004_17480_1 
#>                                       "032"                                      "0211" 
#> lane4_3600STDY6184193_TGGTTGTT_L004_17480_1 lane4_3600STDY6184194_TCTCGGTT_L004_17480_1 
#>                                       "032"                                       "031" 
#> lane4_3600STDY6184195_TAAGCGTT_L004_17480_1 lane4_3600STDY6184196_TCCGTCTT_L004_17480_1 
#>                                       "031"                                      "0341" 
#> lane4_3600STDY6184197_TGTACCTT_L004_17480_1 lane4_3600STDY6184198_TTCTGTGT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184199_TCTGCTGT_L004_17480_1 lane4_3600STDY6184200_TTGGAGGT_L004_17480_1 
#>                                      "0212"                                      "0212" 
#> lane4_3600STDY6184201_TCGAGCGT_L004_17480_1 lane4_3600STDY6184202_TGATACGT_L004_17480_1 
#>                                       "031"                                       "032" 
#> lane4_3600STDY6184203_TGCATAGT_L004_17480_1 lane4_3600STDY6184204_TTGACTCT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184205_TGCGATCT_L004_17480_1 lane4_3600STDY6184206_TTCCTGCT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184207_TAGTGACT_L004_17480_1 lane4_3600STDY6184208_TACAGGAT_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184209_TCCTCAAT_L004_17480_1 lane4_3600STDY6184210_TGTGGTTG_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184211_TAGTCTTG_L004_17480_1 lane4_3600STDY6184212_TTCCATTG_L004_17480_1 
#>                                      "0212"                                      "0211" 
#> lane4_3600STDY6184213_TCGAAGTG_L004_17480_1 lane4_3600STDY6184214_TAACGCTG_L004_17480_1 
#>                                      "0221"                                      "0341" 
#> lane4_3600STDY6184215_TTGGTATG_L004_17480_1 lane4_3600STDY6184216_TGAACTGG_L004_17480_1 
#>                                      "0213"                                      "0222" 
#> lane4_3600STDY6184217_TACTTCGG_L004_17480_1 lane4_3600STDY6184218_TCTCACGG_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184219_TCAGGAGG_L004_17480_1 lane4_3600STDY6184220_TAAGTTCG_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184221_TCCAGTCG_L004_17480_1 lane4_3600STDY6184222_TGTATGCG_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184223_TCATTGAG_L004_17480_1 lane4_3600STDY6184224_TGGCTCAG_L004_17480_1 
#>                                      "0212"                                      "0213" 
#> lane4_3600STDY6184225_TATGCCAG_L004_17480_1 lane4_3600STDY6184226_TCAGATTC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184227_TACTAGTC_L004_17480_1 lane4_3600STDY6184228_TTCAGCTC_L004_17480_1 
#>                                      "0212"                                       "032" 
#> lane4_3600STDY6184229_TGTCTATC_L004_17480_1 lane4_3600STDY6184230_TATGTGGC_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184231_TTACTCGC_L004_17480_1 lane4_3600STDY6184232_TCGTTAGC_L004_17480_1 
#>                                      "0213"                                      "0341" 
#> lane4_3600STDY6184233_TACCGAGC_L004_17480_1 lane4_3600STDY6184234_TGTTCTCC_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184235_TTCGCACC_L004_17480_1 lane4_3600STDY6184236_TTGCGTAC_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184237_TCTACGAC_L004_17480_1 lane4_3600STDY6184238_TGACAGAC_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184239_TAGAACAC_L004_17480_1 lane4_3600STDY6184240_TCATCCTA_L004_17480_1 
#>                                      "0212"                                      "0212" 
#> lane4_3600STDY6184241_TGCTGATA_L004_17480_1 lane4_3600STDY6184242_TAGACGGA_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184243_TGTGAAGA_L004_17480_1 lane4_3600STDY6184244_TCTCTTCA_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184245_TTGTTCCA_L004_17480_1 lane4_3600STDY6184246_TGAAGCCA_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184247_TACCACCA_L004_17480_1 lane4_3600STDY6184248_TGCGTGAA_L004_17480_1 
#>                                      "0222"                                      "0212" 
#> lane4_3600STDY6184249_GGTGAGTT_L004_17480_1 lane4_3600STDY6184250_GATCTCTT_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184251_GTGTCCTT_L004_17480_1 lane4_3600STDY6184252_GACGGATT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184253_GCAACATT_L004_17480_1 lane4_3600STDY6184254_GGTCGTGT_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184255_GAATCTGT_L004_17480_1 lane4_3600STDY6184256_GTACATCT_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184257_GAGGTGCT_L004_17480_1 lane4_3600STDY6184258_GCATGGCT_L004_17480_1 
#>                                       "023"                                      "0211" 
#> lane4_3600STDY6184259_GTTAGCCT_L004_17480_1 lane4_3600STDY6184260_GTCGCTAT_L004_17480_1 
#>                                      "0211"                                      "0222" 
#> lane4_3600STDY6184261_GGAATGAT_L004_17480_1 lane4_3600STDY6184262_GAGCCAAT_L004_17480_1 
#>                                       "023"                                      "0212" 
#> lane4_3600STDY6184263_GCTCCTTG_L004_17480_1 lane4_3600STDY6184264_GTAAGGTG_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184265_GAGGATGG_L004_17480_1 lane4_3600STDY6184266_GTTGTCGG_L004_17480_1 
#>                                      "0211"                                       "032" 
#> lane4_3600STDY6184267_GGATTAGG_L004_17480_1 lane4_3600STDY6184268_GATAGAGG_L004_17480_1 
#>                                      "0213"                                      "0211" 
#> lane4_3600STDY6184269_GTGTGTCG_L004_17480_1 lane4_3600STDY6184270_GCAATCCG_L004_17480_1 
#>                                      "0341"                                       "023" 
#> lane4_3600STDY6184271_GACCTTAG_L004_17480_1 lane4_3600STDY6184272_GCCTGTTC_L004_17480_1 
#>                                      "0222"                                      "0211" 
#> lane4_3600STDY6184273_GCACTGTC_L004_17480_1 lane4_3600STDY6184274_GCTAACTC_L004_17480_1 
#>                                      "0211"                                      "0341" 
#> lane4_3600STDY6184275_GATTCATC_L004_17480_1 lane4_3600STDY6184276_GTCTTGGC_L004_17480_1 
#>                                      "0213"                                       "032" 
#> lane4_3600STDY6184277_GTAGAAGC_L004_17480_1 lane4_3600STDY6184278_GATGGTCC_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184279_GTGCTACC_L004_17480_1 lane4_3600STDY6184280_GCGATTAC_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184281_GGTTGGAC_L004_17480_1 lane4_3600STDY6184282_GGCACAAC_L004_17480_1 
#>                                      "0341"                                      "0222" 
#> lane4_3600STDY6184283_GACACTTA_L004_17480_1 lane4_3600STDY6184284_GTGCAGTA_L004_17480_1 
#>                                      "0211"                                      "0341" 
#> lane4_3600STDY6184285_GGAGTCTA_L004_17480_1 lane4_3600STDY6184286_GCTATGGA_L004_17480_1 
#>                                      "0212"                                      "0211" 
#> lane4_3600STDY6184287_GAGTGCGA_L004_17480_1 lane4_3600STDY6184288_GTAACCGA_L004_17480_1 
#>                                      "0212"                                      "0212" 
#> lane4_3600STDY6184289_GGCAAGCA_L004_17480_1 lane4_3600STDY6184290_GCCTTACA_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184291_GAACGACA_L004_17480_1 lane4_3600STDY6184292_GCAGGTAA_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184293_GCGTCGAA_L004_17480_1 lane4_3600STDY6184294_CGTTCGGT_L004_17480_1 
#>                                      "0341"                                      "0222" 
#> lane4_3600STDY6184295_CACCAGGT_L004_17480_1 lane4_3600STDY6184296_CTGCGAGT_L004_17480_1 
#>                                      "0211"                                      "0341" 
#> lane4_3600STDY6184297_CCGTATCT_L004_17480_1 lane4_3600STDY6184298_CGCTTCCT_L004_17480_1 
#>                                      "0211"                                      "0341" 
#> lane4_3600STDY6184299_CAAGACCT_L004_17480_1 lane4_3600STDY6184300_CACACACT_L004_17480_1 
#>                                      "0211"                                       "032" 
#> lane4_3600STDY6184301_CCTAGTAT_L004_17480_1 lane4_3600STDY6184302_CCACCGAT_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184303_CTTCACAT_L004_17480_1 lane4_3600STDY6184304_CTATCATG_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184305_CATGAATG_L004_17480_1 lane4_3600STDY6184306_CCACTTGG_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184307_CTGTACGG_L004_17480_1 lane4_3600STDY6184308_CTAGATAG_L004_17480_1 
#>                                      "0211"                                      "0341" 
#> lane4_3600STDY6184309_CACTCGAG_L004_17480_1 lane4_3600STDY6184310_CCGACAAG_L004_17480_1 
#>                                      "0222"                                       "032" 
#> lane4_3600STDY6184311_CTTGCTTC_L004_17480_1 lane4_3600STDY6184312_CATAGGTC_L004_17480_1 
#>                                      "0212"                                      "0222" 
#> lane4_3600STDY6184313_CACATTGC_L004_17480_1 lane4_3600STDY6184314_CGCTAAGC_L004_17480_1 
#>                                      "0213"                                      "0212" 
#> lane4_3600STDY6184315_CAACCTCC_L004_17480_1 lane4_3600STDY6184316_CAGCTGAC_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184317_CTCAAGAC_L004_17480_1 lane4_3600STDY6184318_CGTGTCAC_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184319_CCATGCAC_L004_17480_1 lane4_3600STDY6184320_CGTTACTA_L004_17480_1 
#>                                      "0222"                                      "0341" 
#> lane4_3600STDY6184321_CAAGTAGA_L004_17480_1 lane4_3600STDY6184322_CTCTCTCA_L004_17480_1 
#>                                      "0213"                                      "0211" 
#> lane4_3600STDY6184323_CGACTGCA_L004_17480_1 lane4_3600STDY6184324_CCTGAGCA_L004_17480_1 
#>                                      "0212"                                      "0222" 
#> lane4_3600STDY6184325_CAGGCTAA_L004_17480_1 lane4_3600STDY6184326_CGGAGGAA_L004_17480_1 
#>                                       "032"                                      "0211" 
#> lane4_3600STDY6184327_AGGAGATT_L004_17480_1 lane4_3600STDY6184328_AGGCAGCT_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184329_ACGTTCAT_L004_17480_1 lane4_3600STDY6184330_AACGTGTG_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184331_AGACCGTG_L004_17480_1 lane4_3600STDY6184332_ACCTCTGG_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184333_ATCCTAGG_L004_17480_1 lane4_3600STDY6184334_ATCAACCG_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184335_AGGTCACG_L004_17480_1 lane4_3600STDY6184336_ACTGTTAG_L004_17480_1 
#>                                       "032"                                      "0211" 
#> lane4_3600STDY6184337_AAGAGTAG_L004_17480_1 lane4_3600STDY6184338_ATTCGGAG_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184339_ACGCAATC_L004_17480_1 lane4_3600STDY6184340_ACAAGTGC_L004_17480_1 
#>                                      "0213"                                      "0211" 
#> lane4_3600STDY6184341_ATGGATCC_L004_17480_1 lane4_3600STDY6184342_AGAGGACC_L004_17480_1 
#>                                      "0212"                                      "0222" 
#> lane4_3600STDY6184343_ATCTCCAC_L004_17480_1 lane4_3600STDY6184344_ATTGGCTA_L004_17480_1 
#>                                      "0213"                                      "0212" 
#> lane4_3600STDY6184345_AATCCTGA_L004_17480_1 lane4_3600STDY6184346_AGGATTCA_L004_17480_1 
#>                                       "032"                                      "0222" 
#> lane4_3600STDY6184347_AACTGGCA_L004_17480_1 lane4_3600STDY6184348_ACAACGCA_L004_17480_1 
#>                                      "0221"                                      "0222" 
#> lane4_3600STDY6184349_CGGAAACA_L004_17480_1 lane4_3600STDY6184350_AATGAATT_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184351_TAGGACCC_L004_17480_1 lane4_3600STDY6184352_TCTCAGTG_L004_17480_1 
#>                                      "0341"                                      "0222" 
#> lane4_3600STDY6184353_CATGGGAA_L004_17480_1 lane4_3600STDY6184354_CCTAAGAT_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184355_CTCAGATA_L004_17480_1 lane4_3600STDY6184356_CCCATAGG_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184357_GCTATGAC_L004_17480_1 lane4_3600STDY6184358_GCTGTGAA_L004_17480_1 
#>                                      "0222"                                      "0222" 
#> lane4_3600STDY6184359_ACCTTCAA_L004_17480_1 lane4_3600STDY6184360_ACAAAGCC_L004_17480_1 
#>                                      "0223"                                      "0221" 
#> lane4_3600STDY6184361_CAAAACCG_L004_17480_1 lane4_3600STDY6184362_GCTGGACA_L004_17480_1 
#>                                      "0211"                                       "032" 
#> lane4_3600STDY6184363_AAGTCGTA_L004_17480_1 lane4_3600STDY6184364_CATCCGTA_L004_17480_1 
#>                                      "0211"                                       "023" 
#> lane4_3600STDY6184365_TTGTGTCT_L004_17480_1 lane4_3600STDY6184366_TGCTCTAG_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184367_ACCCAACA_L004_17480_1 lane4_3600STDY6184368_CGATCTGA_L004_17480_1 
#>                                      "0222"                                      "0211" 
#> lane4_3600STDY6184369_GTTCCACG_L004_17480_1 lane4_3600STDY6184370_ACTCTTTC_L004_17480_1 
#>                                      "0212"                                      "0213" 
#> lane4_3600STDY6184371_TATTGGAG_L004_17480_1 lane4_3600STDY6184372_TAAACATA_L004_17480_1 
#>                                      "0221"                                      "0221" 
#> lane4_3600STDY6184373_GTAAGATA_L004_17480_1 lane4_3600STDY6184374_TACCGCAA_L004_17480_1 
#>                                      "0223"                                       "032" 
#> lane4_3600STDY6184375_TATCTCCT_L004_17480_1 lane4_3600STDY6184376_TGTCATCT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184377_ATAGCTCT_L004_17480_1 lane4_3600STDY6184378_AGTCCAAC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184379_TTTGGGCA_L004_17480_1 lane4_3600STDY6184380_TCTGACGC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184381_TGTCGACT_L004_17480_1 lane4_3600STDY6184382_GTCACGTA_L004_17480_1 
#>                                       "032"                                       "031" 
#> lane4_3600STDY6184383_TTGAGCGA_L004_17480_1 lane4_3600STDY6184384_GAGACATA_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184385_GTCAAGCT_L004_17480_1 lane4_3600STDY6184386_AGCAAGTT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184387_GACGCTCA_L004_17480_1 lane4_3600STDY6184388_ACGGCAGC_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184389_AGAACTGA_L004_17480_1 lane4_3600STDY6184390_CGCCTTTG_L004_17480_1 
#>                                      "0212"                                      "0222" 
#> lane4_3600STDY6184391_TAAGGTCA_L004_17480_1 lane4_3600STDY6184392_ACGTTGGC_L004_17480_1 
#>                                      "0222"                                      "0212" 
#> lane4_3600STDY6184393_CCAGCTTA_L004_17480_1 lane4_3600STDY6184394_GAATCCTA_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184395_ACTTCGTA_L004_17480_1 lane4_3600STDY6184396_TAGTCGGT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184397_CGCACGAG_L004_17480_1 lane4_3600STDY6184398_ACGTACTA_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184399_AGCGCCAA_L004_17480_1 lane4_3600STDY6184400_GCCTGCCC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184401_AGGACGAT_L004_17480_1 lane4_3600STDY6184402_CTTGACCG_L004_17480_1 
#>                                      "0213"                                       "032" 
#> lane4_3600STDY6184403_AGGTCTAA_L004_17480_1 lane4_3600STDY6184404_CGAGATCC_L004_17480_1 
#>                                      "0213"                                       "032" 
#> lane4_3600STDY6184405_ATTAGCGG_L004_17480_1 lane4_3600STDY6184406_GCGCTGAT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184407_TGCTGAAC_L004_17480_1 lane4_3600STDY6184408_GAGGGCAG_L004_17480_1 
#>                                       "032"                                      "0213" 
#> lane4_3600STDY6184409_GTTTTCAC_L004_17480_1 lane4_3600STDY6184410_GAGATGCC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184411_TTGAGAAG_L004_17480_1 lane4_3600STDY6184412_GCATCCGG_L004_17480_1 
#>                                       "032"                                       "023" 
#> lane4_3600STDY6184413_GTCACCAG_L004_17480_1 lane4_3600STDY6184414_GAGGTCGC_L004_17480_1 
#>                                      "0211"                                      "0222" 
#> lane4_3600STDY6184415_AAGGGGTA_L004_17480_1 lane4_3600STDY6184416_TTTTACGT_L004_17480_1 
#>                                      "0212"                                      "0211" 
#> lane4_3600STDY6184417_TTCCTACA_L004_17480_1 lane4_3600STDY6184418_AGTGTAGT_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184419_GTGGCCAA_L004_17480_1 lane4_3600STDY6184420_AAATACTC_L004_17480_1 
#>                                      "0212"                                       "032" 
#> lane4_3600STDY6184421_CACCCGTC_L004_17480_1 lane4_3600STDY6184422_TCGTGGTT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184423_ACTTGGGG_L004_17480_1 lane4_3600STDY6184424_GGCTGCTT_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184425_CAGGGTCG_L004_17480_1 lane4_3600STDY6184426_CTCGTCGA_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184427_TCTACAGT_L004_17480_1 lane4_3600STDY6184428_CTTCTAGA_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184429_AACGGCTT_L004_17480_1 lane4_3600STDY6184430_ATAAGACT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184431_GTTTTTCG_L004_17480_1 lane4_3600STDY6184432_ATTGGTAT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184433_CGCCAGTA_L004_17480_1 lane4_3600STDY6184434_AAGCCGAA_L004_17480_1 
#>                                      "0223"                                       "032" 
#> lane4_3600STDY6184435_TGACCCAC_L004_17480_1 lane4_3600STDY6184436_ATTGCACA_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184437_CTTTTGAT_L004_17480_1 lane4_3600STDY6184438_TAGCGAGA_L004_17480_1 
#>                                      "0213"                                      "0222" 
#> lane4_3600STDY6184439_TTCGCAGG_L004_17480_1 lane4_3600STDY6184440_TAGTTATT_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184441_TCCTCCGA_L004_17480_1 lane4_3600STDY6184442_GCGGGTCT_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184443_GATTCTAT_L004_17480_1 lane4_3600STDY6184444_ATGCAAAG_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184445_GTCTGAGG_L004_17480_1 lane4_3600STDY6184446_TCTGGCGA_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184447_AATTTGCG_L004_17480_1 lane4_3600STDY6184448_TGGGTTGG_L004_17480_1 
#>                                      "0222"                                       "023" 
#> lane4_3600STDY6184449_AGTTGAAA_L004_17480_1 lane4_3600STDY6184450_GACCGGAA_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184451_GATCGAAC_L004_17480_1 lane4_3600STDY6184452_GTATAGGG_L004_17480_1 
#>                                      "0342"                                      "0341" 
#> lane4_3600STDY6184453_GGTAAGAG_L004_17480_1 lane4_3600STDY6184454_AGTCCGAT_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184455_ATACAGGC_L004_17480_1 lane4_3600STDY6184456_TGAGACTC_L004_17480_1 
#>                                      "0213"                                      "0222" 
#> lane4_3600STDY6184457_ACTCAGGA_L004_17480_1 lane4_3600STDY6184458_GTGTCTGA_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184459_CTTGAATC_L004_17480_1 lane4_3600STDY6184460_CCGCATGA_L004_17480_1 
#>                                      "0211"                                      "0222" 
#> lane4_3600STDY6184461_AAGTAACA_L004_17480_1 lane4_3600STDY6184462_GTGGTACT_L004_17480_1 
#>                                      "0222"                                      "0222" 
#> lane4_3600STDY6184463_AGCTGTGC_L004_17480_1 lane4_3600STDY6184464_TTACCTTC_L004_17480_1 
#>                                      "0222"                                      "0222" 
#> lane4_3600STDY6184465_TCCGGGTA_L004_17480_1 lane4_3600STDY6184466_CTACGTAA_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184467_TCGGACCG_L004_17480_1 lane4_3600STDY6184468_ATGCGTCG_L004_17480_1 
#>                                      "0211"                                       "032" 
#> lane4_3600STDY6184469_TTCTTAGC_L004_17480_1 lane4_3600STDY6184470_TGAGTAAG_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184471_AAGTGATA_L004_17480_1 lane4_3600STDY6184472_TCGATGCG_L004_17480_1 
#>                                      "0213"                                      "0341" 
#> lane4_3600STDY6184473_TATTCTGG_L004_17480_1 lane4_3600STDY6184474_AGCCGTGA_L004_17480_1 
#>                                      "0213"                                      "0211" 
#> lane4_3600STDY6184475_AAGCCTTC_L004_17480_1 lane4_3600STDY6184476_AGGTATCC_L004_17480_1 
#>                                      "0213"                                      "0341" 
#> lane4_3600STDY6184477_AGGATCTC_L004_17480_1 lane4_3600STDY6184478_CTGTTTGA_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184479_GGAATTTC_L004_17480_1 lane4_3600STDY6184480_TTGGAGCA_L004_17480_1 
#>                                      "0341"                                      "0213" 
#> lane4_3600STDY6184481_AAGGTCTG_L004_17480_1 lane4_3600STDY6184482_AATTAGGC_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184483_AATCGGGT_L004_17480_1 lane4_3600STDY6184484_AGGTAGAC_L004_17480_1 
#>                                      "0212"                                      "0212" 
#> lane4_3600STDY6184485_CTTATTCC_L004_17480_1 lane4_3600STDY6184486_CAGGCTCT_L004_17480_1 
#>                                      "0341"                                      "0222" 
#> lane4_3600STDY6184487_AAAGCACG_L004_17480_1 lane4_3600STDY6184488_GTATACAC_L004_17480_1 
#>                                      "0222"                                      "0211" 
#> lane4_3600STDY6184489_GGACATAT_L004_17480_1 lane4_3600STDY6184490_CGGTTGGG_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184491_GTCCGTGA_L004_17480_1 lane4_3600STDY6184492_GCCGAACC_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184493_ACTTTACT_L004_17480_1 lane4_3600STDY6184494_GGGTCCAT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184495_ATAACTAG_L004_17480_1 lane4_3600STDY6184496_AATAGAGA_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184497_TCACCATT_L004_17480_1 lane4_3600STDY6184498_CGCCTGAT_L004_17480_1 
#>                                      "0341"                                      "0222" 
#> lane4_3600STDY6184499_GCGTGAAC_L004_17480_1 lane4_3600STDY6184500_TAAGGGTG_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184501_GGTGTCGA_L004_17480_1 lane4_3600STDY6184502_CCGTTAGG_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184503_TGGCAAAA_L004_17480_1 lane4_3600STDY6184504_CCTACCCG_L004_17480_1 
#>                                      "0213"                                      "0222" 
#> lane4_3600STDY6184505_AACAGCGC_L004_17480_1 lane4_3600STDY6184506_TATACATC_L004_17480_1 
#>                                      "0213"                                      "0341" 
#> lane4_3600STDY6184507_AAGCGACT_L004_17480_1 lane4_3600STDY6184508_GAAGCGCA_L004_17480_1 
#>                                      "0211"                                      "0222" 
#> lane4_3600STDY6184509_ACCTCTAC_L004_17480_1 lane4_3600STDY6184510_GATTGCGT_L004_17480_1 
#>                                      "0222"                                       "023" 
#> lane4_3600STDY6184511_GCTGGTTG_L004_17480_1 lane4_3600STDY6184512_ATCGTCCT_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184513_GGACACGG_L004_17480_1 lane4_3600STDY6184514_CGCACCTA_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184515_CTTCGGCT_L004_17480_1 lane4_3600STDY6184516_CGAATCGA_L004_17480_1 
#>                                      "0212"                                       "032" 
#> lane4_3600STDY6184517_TAACAACT_L004_17480_1 lane4_3600STDY6184518_AGCTCTTT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184519_TAATCCCT_L004_17480_1 lane4_3600STDY6184520_AGGACACT_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184521_TTACACTA_L004_17480_1 lane4_3600STDY6184522_AAACATCA_L004_17480_1 
#>                                      "0341"                                      "0213" 
#> lane4_3600STDY6184523_CCATAGCT_L004_17480_1 lane4_3600STDY6184524_GTTATGGC_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184525_ATCCCCTA_L004_17480_1 lane4_3600STDY6184526_CATACTAC_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184527_CAATTGTT_L004_17480_1 lane4_3600STDY6184528_AAACCCGT_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184529_CAGATTTC_L004_17480_1 lane4_3600STDY6184530_GCGTAGGT_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184531_GGCATTCG_L004_17480_1 lane4_3600STDY6184532_TGGGGCTT_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184533_CTGACTAC_L004_17480_1 lane4_3600STDY6184534_AACTTTTA_L004_17480_1 
#>                                      "0212"                                      "0211" 
#> lane4_3600STDY6184535_AGGGATTC_L004_17480_1 lane4_3600STDY6184536_CCGAGTAG_L004_17480_1 
#>                                      "0221"                                      "0212" 
#> lane4_3600STDY6184537_GGGGACTA_L004_17480_1 lane4_3600STDY6184538_GGAGTTGA_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184539_AGCTCATC_L004_17480_1 lane4_3600STDY6184540_TAATCAAC_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184541_ACTGGTCG_L004_17480_1 lane4_3600STDY6184542_GACGATTG_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184543_AGCGATGA_L004_17480_1 lane4_3600STDY6184544_GAAGAGAT_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184545_CGTATGCA_L004_17480_1 lane4_3600STDY6184546_CACGTGCG_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184547_GCTTAAAC_L004_17480_1 lane4_3600STDY6184548_GTTCCGCA_L004_17480_1 
#>                                       "032"                                      "0221" 
#> lane4_3600STDY6184549_GTATCGTC_L004_17480_1 lane4_3600STDY6184550_GTCCTCAC_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184551_GTACGGAC_L004_17480_1 lane4_3600STDY6184552_CATTTTGC_L004_17480_1 
#>                                      "0221"                                      "0221" 
#> lane4_3600STDY6184553_TCCTCTCT_L004_17480_1 lane4_3600STDY6184554_AGCAACGA_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184555_ACAGAAGA_L004_17480_1 lane4_3600STDY6184556_CGACCCTT_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184557_CTGCCTAG_L004_17480_1 lane4_3600STDY6184558_GAGCGCAT_L004_17480_1 
#>                                      "0212"                                      "0222" 
#> lane4_3600STDY6184559_AACTTATC_L004_17480_1 lane4_3600STDY6184560_CCGATGTA_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184561_TTACTACC_L004_17480_1 lane4_3600STDY6184562_CAAGGAGC_L004_17480_1 
#>                                      "0341"                                      "0221" 
#> lane4_3600STDY6184563_TGGTTGAC_L004_17480_1 lane4_3600STDY6184564_ACCTGCTG_L004_17480_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6183797_ATCACGTT_L001_17592_1 lane1_3600STDY6183798_CGATGTTT_L001_17592_1 
#>                                      "0221"                                       "031" 
#> lane1_3600STDY6183799_TTAGGCAT_L001_17592_1 lane1_3600STDY6183800_TGACCACT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183801_ACAGTGGT_L001_17592_1 lane1_3600STDY6183802_GCCAATGT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183803_CAGATCTG_L001_17592_1 lane1_3600STDY6183804_ACTTGATG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183805_GATCAGCG_L001_17592_1 lane1_3600STDY6183806_TAGCTTGT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183807_GGCTACAG_L001_17592_1 lane1_3600STDY6183808_CTTGTACT_L001_17592_1 
#>                                       "031"                                      "0223" 
#> lane1_3600STDY6183809_TGGTTGTT_L001_17592_1 lane1_3600STDY6183810_TCTCGGTT_L001_17592_1 
#>                                       "031"                                      "0221" 
#> lane1_3600STDY6183811_TAAGCGTT_L001_17592_1 lane1_3600STDY6183812_TCCGTCTT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183813_TGTACCTT_L001_17592_1 lane1_3600STDY6183814_TTCTGTGT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183815_TCTGCTGT_L001_17592_1 lane1_3600STDY6183816_TTGGAGGT_L001_17592_1 
#>                                       "033"                                      "0221" 
#> lane1_3600STDY6183817_TCGAGCGT_L001_17592_1 lane1_3600STDY6183818_TGATACGT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183819_TGCATAGT_L001_17592_1 lane1_3600STDY6183820_TTGACTCT_L001_17592_1 
#>                                       "031"                                      "0221" 
#> lane1_3600STDY6183821_TGCGATCT_L001_17592_1 lane1_3600STDY6183822_TTCCTGCT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183823_TAGTGACT_L001_17592_1 lane1_3600STDY6183824_TACAGGAT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183825_TCCTCAAT_L001_17592_1 lane1_3600STDY6183826_TGTGGTTG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183827_TAGTCTTG_L001_17592_1 lane1_3600STDY6183828_TTCCATTG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183829_TCGAAGTG_L001_17592_1 lane1_3600STDY6183830_TAACGCTG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183831_TTGGTATG_L001_17592_1 lane1_3600STDY6183832_TGAACTGG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183833_TACTTCGG_L001_17592_1 lane1_3600STDY6183834_TCTCACGG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183835_TCAGGAGG_L001_17592_1 lane1_3600STDY6183836_TAAGTTCG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183837_TCCAGTCG_L001_17592_1 lane1_3600STDY6183838_TGTATGCG_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183839_TCATTGAG_L001_17592_1 lane1_3600STDY6183840_TGGCTCAG_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6183841_TATGCCAG_L001_17592_1 lane1_3600STDY6183842_TCAGATTC_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6183843_TACTAGTC_L001_17592_1 lane1_3600STDY6183844_TTCAGCTC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183845_TGTCTATC_L001_17592_1 lane1_3600STDY6183846_TATGTGGC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183847_TTACTCGC_L001_17592_1 lane1_3600STDY6183848_TCGTTAGC_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183849_TACCGAGC_L001_17592_1 lane1_3600STDY6183850_TGTTCTCC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183851_TTCGCACC_L001_17592_1 lane1_3600STDY6183852_TTGCGTAC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183853_TCTACGAC_L001_17592_1 lane1_3600STDY6183854_TGACAGAC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183855_TAGAACAC_L001_17592_1 lane1_3600STDY6183856_TCATCCTA_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183857_TGCTGATA_L001_17592_1 lane1_3600STDY6183858_TAGACGGA_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6183859_TGTGAAGA_L001_17592_1 lane1_3600STDY6183860_TCTCTTCA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183861_TTGTTCCA_L001_17592_1 lane1_3600STDY6183862_TGAAGCCA_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183863_TACCACCA_L001_17592_1 lane1_3600STDY6183864_TGCGTGAA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6183865_GGTGAGTT_L001_17592_1 lane1_3600STDY6183866_GATCTCTT_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6183867_GTGTCCTT_L001_17592_1 lane1_3600STDY6183868_GACGGATT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183869_GCAACATT_L001_17592_1 lane1_3600STDY6183870_GGTCGTGT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183871_GAATCTGT_L001_17592_1 lane1_3600STDY6183872_GTACATCT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183873_GAGGTGCT_L001_17592_1 lane1_3600STDY6183874_GCATGGCT_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6183875_GTTAGCCT_L001_17592_1 lane1_3600STDY6183876_GTCGCTAT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183877_GGAATGAT_L001_17592_1 lane1_3600STDY6183878_GAGCCAAT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183879_GCTCCTTG_L001_17592_1 lane1_3600STDY6183880_GTAAGGTG_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183881_GAGGATGG_L001_17592_1 lane1_3600STDY6183882_GTTGTCGG_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183883_GGATTAGG_L001_17592_1 lane1_3600STDY6183884_GATAGAGG_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6183885_GTGTGTCG_L001_17592_1 lane1_3600STDY6183886_GCAATCCG_L001_17592_1 
#>                                       "023"                                      "0222" 
#> lane1_3600STDY6183887_GACCTTAG_L001_17592_1 lane1_3600STDY6183888_GCCTGTTC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183889_GCACTGTC_L001_17592_1 lane1_3600STDY6183890_GCTAACTC_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6183891_GATTCATC_L001_17592_1 lane1_3600STDY6183892_GTCTTGGC_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6183893_GTAGAAGC_L001_17592_1 lane1_3600STDY6183894_GATGGTCC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183895_GTGCTACC_L001_17592_1 lane1_3600STDY6183896_GCGATTAC_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183897_GGTTGGAC_L001_17592_1 lane1_3600STDY6183898_GGCACAAC_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6183899_GACACTTA_L001_17592_1 lane1_3600STDY6183900_GTGCAGTA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183901_GGAGTCTA_L001_17592_1 lane1_3600STDY6183902_GCTATGGA_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183903_GAGTGCGA_L001_17592_1 lane1_3600STDY6183904_GTAACCGA_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183905_GGCAAGCA_L001_17592_1 lane1_3600STDY6183906_GCCTTACA_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6183907_GAACGACA_L001_17592_1 lane1_3600STDY6183908_GCAGGTAA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6183909_GCGTCGAA_L001_17592_1 lane1_3600STDY6183910_CGTTCGGT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183911_CACCAGGT_L001_17592_1 lane1_3600STDY6183912_CTGCGAGT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183913_CCGTATCT_L001_17592_1 lane1_3600STDY6183914_CGCTTCCT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183915_CAAGACCT_L001_17592_1 lane1_3600STDY6183916_CACACACT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183917_CCTAGTAT_L001_17592_1 lane1_3600STDY6183918_CCACCGAT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183919_CTTCACAT_L001_17592_1 lane1_3600STDY6183920_CTATCATG_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183921_CATGAATG_L001_17592_1 lane1_3600STDY6183922_CCACTTGG_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183923_CTGTACGG_L001_17592_1 lane1_3600STDY6183924_CTAGATAG_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183925_CACTCGAG_L001_17592_1 lane1_3600STDY6183926_CCGACAAG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183927_CTTGCTTC_L001_17592_1 lane1_3600STDY6183928_CATAGGTC_L001_17592_1 
#>                                       "023"                                      "0212" 
#> lane1_3600STDY6183929_CACATTGC_L001_17592_1 lane1_3600STDY6183930_CGCTAAGC_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6183931_CAACCTCC_L001_17592_1 lane1_3600STDY6183932_CAGCTGAC_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6183933_CTCAAGAC_L001_17592_1 lane1_3600STDY6183934_CGTGTCAC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183935_CCATGCAC_L001_17592_1 lane1_3600STDY6183936_CGTTACTA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183937_CAAGTAGA_L001_17592_1 lane1_3600STDY6183938_CTCTCTCA_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183939_CGACTGCA_L001_17592_1 lane1_3600STDY6183940_CCTGAGCA_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183941_CAGGCTAA_L001_17592_1 lane1_3600STDY6183942_CGGAGGAA_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183943_AGGAGATT_L001_17592_1 lane1_3600STDY6183944_AGGCAGCT_L001_17592_1 
#>                                       "031"                                      "0213" 
#> lane1_3600STDY6183945_ACGTTCAT_L001_17592_1 lane1_3600STDY6183946_AACGTGTG_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183947_AGACCGTG_L001_17592_1 lane1_3600STDY6183948_ACCTCTGG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183949_ATCCTAGG_L001_17592_1 lane1_3600STDY6183950_ATCAACCG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183951_AGGTCACG_L001_17592_1 lane1_3600STDY6183952_ACTGTTAG_L001_17592_1 
#>                                       "031"                                      "0221" 
#> lane1_3600STDY6183953_AAGAGTAG_L001_17592_1 lane1_3600STDY6183954_ATTCGGAG_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6183955_ACGCAATC_L001_17592_1 lane1_3600STDY6183956_ACAAGTGC_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6183957_ATGGATCC_L001_17592_1 lane1_3600STDY6183958_AGAGGACC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183959_ATCTCCAC_L001_17592_1 lane1_3600STDY6183960_ATTGGCTA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183961_AATCCTGA_L001_17592_1 lane1_3600STDY6183962_AGGATTCA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183963_AACTGGCA_L001_17592_1 lane1_3600STDY6183964_ACAACGCA_L001_17592_1 
#>                                       "033"                                      "0223" 
#> lane1_3600STDY6183965_CGGAAACA_L001_17592_1 lane1_3600STDY6183966_AATGAATT_L001_17592_1 
#>                                      "0222"                                       "033" 
#> lane1_3600STDY6183967_TAGGACCC_L001_17592_1 lane1_3600STDY6183968_TCTCAGTG_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183969_CATGGGAA_L001_17592_1 lane1_3600STDY6183970_CCTAAGAT_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6183971_CTCAGATA_L001_17592_1 lane1_3600STDY6183972_CCCATAGG_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183973_GCTATGAC_L001_17592_1 lane1_3600STDY6183974_GCTGTGAA_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183975_ACCTTCAA_L001_17592_1 lane1_3600STDY6183976_ACAAAGCC_L001_17592_1 
#>                                       "023"                                      "0211" 
#> lane1_3600STDY6183977_CAAAACCG_L001_17592_1 lane1_3600STDY6183978_GCTGGACA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183979_AAGTCGTA_L001_17592_1 lane1_3600STDY6183980_CATCCGTA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183981_TTGTGTCT_L001_17592_1 lane1_3600STDY6183982_TGCTCTAG_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183983_ACCCAACA_L001_17592_1 lane1_3600STDY6183984_CGATCTGA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183985_GTTCCACG_L001_17592_1 lane1_3600STDY6183986_ACTCTTTC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183987_TATTGGAG_L001_17592_1 lane1_3600STDY6183988_TAAACATA_L001_17592_1 
#>                                       "023"                                      "0221" 
#> lane1_3600STDY6183989_GTAAGATA_L001_17592_1 lane1_3600STDY6183990_TACCGCAA_L001_17592_1 
#>                                      "0221"                                       "031" 
#> lane1_3600STDY6183991_TATCTCCT_L001_17592_1 lane1_3600STDY6183992_TGTCATCT_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6183993_ATAGCTCT_L001_17592_1 lane1_3600STDY6183994_AGTCCAAC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183995_TTTGGGCA_L001_17592_1 lane1_3600STDY6183996_TCTGACGC_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6183997_TGTCGACT_L001_17592_1 lane1_3600STDY6183998_GTCACGTA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183999_TTGAGCGA_L001_17592_1 lane1_3600STDY6184000_GAGACATA_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6184001_GTCAAGCT_L001_17592_1 lane1_3600STDY6184002_AGCAAGTT_L001_17592_1 
#>                                      "0221"                                       "031" 
#> lane1_3600STDY6184003_GACGCTCA_L001_17592_1 lane1_3600STDY6184004_ACGGCAGC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184005_AGAACTGA_L001_17592_1 lane1_3600STDY6184006_CGCCTTTG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184007_TAAGGTCA_L001_17592_1 lane1_3600STDY6184008_ACGTTGGC_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184009_CCAGCTTA_L001_17592_1 lane1_3600STDY6184010_GAATCCTA_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184011_ACTTCGTA_L001_17592_1 lane1_3600STDY6184012_TAGTCGGT_L001_17592_1 
#>                                      "0223"                                       "031" 
#> lane1_3600STDY6184013_CGCACGAG_L001_17592_1 lane1_3600STDY6184014_ACGTACTA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184015_AGCGCCAA_L001_17592_1 lane1_3600STDY6184016_GCCTGCCC_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6184017_AGGACGAT_L001_17592_1 lane1_3600STDY6184018_CTTGACCG_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6184019_AGGTCTAA_L001_17592_1 lane1_3600STDY6184020_CGAGATCC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184021_ATTAGCGG_L001_17592_1 lane1_3600STDY6184022_GCGCTGAT_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6184023_TGCTGAAC_L001_17592_1 lane1_3600STDY6184024_GAGGGCAG_L001_17592_1 
#>                                      "0221"                                       "031" 
#> lane1_3600STDY6184025_GTTTTCAC_L001_17592_1 lane1_3600STDY6184026_GAGATGCC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184027_TTGAGAAG_L001_17592_1 lane1_3600STDY6184028_GCATCCGG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184029_GTCACCAG_L001_17592_1 lane1_3600STDY6184030_GAGGTCGC_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184031_AAGGGGTA_L001_17592_1 lane1_3600STDY6184032_TTTTACGT_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184033_TTCCTACA_L001_17592_1 lane1_3600STDY6184034_AGTGTAGT_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6184035_GTGGCCAA_L001_17592_1 lane1_3600STDY6184036_AAATACTC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184037_CACCCGTC_L001_17592_1 lane1_3600STDY6184038_TCGTGGTT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184039_ACTTGGGG_L001_17592_1 lane1_3600STDY6184040_GGCTGCTT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184041_CAGGGTCG_L001_17592_1 lane1_3600STDY6184042_CTCGTCGA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184043_TCTACAGT_L001_17592_1 lane1_3600STDY6184044_CTTCTAGA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184045_AACGGCTT_L001_17592_1 lane1_3600STDY6184046_ATAAGACT_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6184047_GTTTTTCG_L001_17592_1 lane1_3600STDY6184048_ATTGGTAT_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6184049_CGCCAGTA_L001_17592_1 lane1_3600STDY6184050_AAGCCGAA_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184051_TGACCCAC_L001_17592_1 lane1_3600STDY6184052_ATTGCACA_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6184053_CTTTTGAT_L001_17592_1 lane1_3600STDY6184054_TAGCGAGA_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184055_TTCGCAGG_L001_17592_1 lane1_3600STDY6184056_TAGTTATT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184057_TCCTCCGA_L001_17592_1 lane1_3600STDY6184058_GCGGGTCT_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6184059_GATTCTAT_L001_17592_1 lane1_3600STDY6184060_ATGCAAAG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184061_GTCTGAGG_L001_17592_1 lane1_3600STDY6184062_TCTGGCGA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184063_AATTTGCG_L001_17592_1 lane1_3600STDY6184064_TGGGTTGG_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184065_AGTTGAAA_L001_17592_1 lane1_3600STDY6184066_GACCGGAA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184067_GATCGAAC_L001_17592_1 lane1_3600STDY6184068_GTATAGGG_L001_17592_1 
#>                                      "0222"                                      "0222" 
#> lane1_3600STDY6184069_GGTAAGAG_L001_17592_1 lane1_3600STDY6184070_AGTCCGAT_L001_17592_1 
#>                                      "0342"                                       "023" 
#> lane1_3600STDY6184071_ATACAGGC_L001_17592_1 lane1_3600STDY6184072_TGAGACTC_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6184073_ACTCAGGA_L001_17592_1 lane1_3600STDY6184074_GTGTCTGA_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184075_CTTGAATC_L001_17592_1 lane1_3600STDY6184076_CCGCATGA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184077_AAGTAACA_L001_17592_1 lane1_3600STDY6184078_GTGGTACT_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184079_AGCTGTGC_L001_17592_1 lane1_3600STDY6184080_TTACCTTC_L001_17592_1 
#>                                      "0222"                                       "033" 
#> lane1_3600STDY6184081_TCCGGGTA_L001_17592_1 lane1_3600STDY6184082_CTACGTAA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184083_TCGGACCG_L001_17592_1 lane1_3600STDY6184084_ATGCGTCG_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184085_TTCTTAGC_L001_17592_1 lane1_3600STDY6184086_TGAGTAAG_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184087_AAGTGATA_L001_17592_1 lane1_3600STDY6184088_TCGATGCG_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184089_TATTCTGG_L001_17592_1 lane1_3600STDY6184090_AGCCGTGA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184091_AAGCCTTC_L001_17592_1 lane1_3600STDY6184092_AGGTATCC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184093_AGGATCTC_L001_17592_1 lane1_3600STDY6184094_CTGTTTGA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184095_GGAATTTC_L001_17592_1 lane1_3600STDY6184096_TTGGAGCA_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6184097_AAGGTCTG_L001_17592_1 lane1_3600STDY6184098_AATTAGGC_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184099_AATCGGGT_L001_17592_1 lane1_3600STDY6184100_AGGTAGAC_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184101_CTTATTCC_L001_17592_1 lane1_3600STDY6184102_CAGGCTCT_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184103_AAAGCACG_L001_17592_1 lane1_3600STDY6184104_GTATACAC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184105_GGACATAT_L001_17592_1 lane1_3600STDY6184106_CGGTTGGG_L001_17592_1 
#>                                      "0222"                                       "023" 
#> lane1_3600STDY6184107_GTCCGTGA_L001_17592_1 lane1_3600STDY6184108_GCCGAACC_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184109_ACTTTACT_L001_17592_1 lane1_3600STDY6184110_GGGTCCAT_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184111_ATAACTAG_L001_17592_1 lane1_3600STDY6184112_AATAGAGA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184113_TCACCATT_L001_17592_1 lane1_3600STDY6184114_CGCCTGAT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184115_GCGTGAAC_L001_17592_1 lane1_3600STDY6184116_TAAGGGTG_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184117_GGTGTCGA_L001_17592_1 lane1_3600STDY6184118_CCGTTAGG_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184119_TGGCAAAA_L001_17592_1 lane1_3600STDY6184120_CCTACCCG_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6184121_AACAGCGC_L001_17592_1 lane1_3600STDY6184122_TATACATC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184123_AAGCGACT_L001_17592_1 lane1_3600STDY6184124_GAAGCGCA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184125_ACCTCTAC_L001_17592_1 lane1_3600STDY6184126_GATTGCGT_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184127_GCTGGTTG_L001_17592_1 lane1_3600STDY6184128_ATCGTCCT_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184129_GGACACGG_L001_17592_1 lane1_3600STDY6184130_CGCACCTA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184131_CTTCGGCT_L001_17592_1 lane1_3600STDY6184132_CGAATCGA_L001_17592_1 
#>                                       "031"                                      "0222" 
#> lane1_3600STDY6184133_TAACAACT_L001_17592_1 lane1_3600STDY6184134_AGCTCTTT_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184135_TAATCCCT_L001_17592_1 lane1_3600STDY6184136_AGGACACT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184137_TTACACTA_L001_17592_1 lane1_3600STDY6184138_AAACATCA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184139_CCATAGCT_L001_17592_1 lane1_3600STDY6184140_GTTATGGC_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184141_ATCCCCTA_L001_17592_1 lane1_3600STDY6184142_CATACTAC_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6184143_CAATTGTT_L001_17592_1 lane1_3600STDY6184144_AAACCCGT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184145_CAGATTTC_L001_17592_1 lane1_3600STDY6184146_GCGTAGGT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184147_GGCATTCG_L001_17592_1 lane1_3600STDY6184148_TGGGGCTT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184149_CTGACTAC_L001_17592_1 lane1_3600STDY6184150_AACTTTTA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184151_AGGGATTC_L001_17592_1 lane1_3600STDY6184152_CCGAGTAG_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6184153_GGGGACTA_L001_17592_1 lane1_3600STDY6184154_GGAGTTGA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184155_AGCTCATC_L001_17592_1 lane1_3600STDY6184156_TAATCAAC_L001_17592_1 
#>                                       "031"                                      "0221" 
#> lane1_3600STDY6184157_ACTGGTCG_L001_17592_1 lane1_3600STDY6184158_GACGATTG_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6184159_AGCGATGA_L001_17592_1 lane1_3600STDY6184160_GAAGAGAT_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184161_CGTATGCA_L001_17592_1 lane1_3600STDY6184162_CACGTGCG_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184163_GCTTAAAC_L001_17592_1 lane1_3600STDY6184164_GTTCCGCA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184165_GTATCGTC_L001_17592_1 lane1_3600STDY6184166_GTCCTCAC_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184167_GTACGGAC_L001_17592_1 lane1_3600STDY6184168_CATTTTGC_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6184169_TCCTCTCT_L001_17592_1 lane1_3600STDY6184170_AGCAACGA_L001_17592_1 
#>                                      "0341"                                       "023" 
#> lane1_3600STDY6184171_ACAGAAGA_L001_17592_1 lane1_3600STDY6184172_CGACCCTT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184173_CTGCCTAG_L001_17592_1 lane1_3600STDY6184174_GAGCGCAT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184175_AACTTATC_L001_17592_1 lane1_3600STDY6184176_CCGATGTA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184177_TTACTACC_L001_17592_1 lane1_3600STDY6184178_CAAGGAGC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184179_TGGTTGAC_L001_17592_1 lane1_3600STDY6184180_ACCTGCTG_L001_17592_1 
#>                                       "031"                                      "0221"

show/hide code output

get_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 1878))
#> lane1_3600STDY6077864_ATCACGTT_L001_15986_1 lane1_3600STDY6077865_CGATGTTT_L001_15986_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6077866_TTAGGCAT_L001_15986_1 lane1_3600STDY6077867_TGACCACT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077868_ACAGTGGT_L001_15986_1 lane1_3600STDY6077869_GCCAATGT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077870_CAGATCTG_L001_15986_1 lane1_3600STDY6077871_ACTTGATG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077872_GATCAGCG_L001_15986_1 lane1_3600STDY6077873_TAGCTTGT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077874_GGCTACAG_L001_15986_1 lane1_3600STDY6077875_CTTGTACT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077876_TGGTTGTT_L001_15986_1 lane1_3600STDY6077877_TCTCGGTT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077878_TAAGCGTT_L001_15986_1 lane1_3600STDY6077879_TCCGTCTT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077880_TGTACCTT_L001_15986_1 lane1_3600STDY6077881_TTCTGTGT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077882_TCTGCTGT_L001_15986_1 lane1_3600STDY6077883_TTGGAGGT_L001_15986_1 
#>                                      "0121"                                      "0221" 
#> lane1_3600STDY6077884_TCGAGCGT_L001_15986_1 lane1_3600STDY6077885_TGATACGT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077886_TGCATAGT_L001_15986_1 lane1_3600STDY6077887_TTGACTCT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077888_TGCGATCT_L001_15986_1 lane1_3600STDY6077889_TTCCTGCT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077890_TAGTGACT_L001_15986_1 lane1_3600STDY6077891_TACAGGAT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077892_TCCTCAAT_L001_15986_1 lane1_3600STDY6077893_TGTGGTTG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077894_TAGTCTTG_L001_15986_1 lane1_3600STDY6077895_TTCCATTG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077896_TCGAAGTG_L001_15986_1 lane1_3600STDY6077897_TAACGCTG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077898_TTGGTATG_L001_15986_1 lane1_3600STDY6077899_TGAACTGG_L001_15986_1 
#>                                      "0121"                                      "0221" 
#> lane1_3600STDY6077900_TACTTCGG_L001_15986_1 lane1_3600STDY6077901_TCTCACGG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077902_TCAGGAGG_L001_15986_1 lane1_3600STDY6077903_TAAGTTCG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077904_TCCAGTCG_L001_15986_1 lane1_3600STDY6077905_TGTATGCG_L001_15986_1 
#>                                      "0221"                                      "0121" 
#> lane1_3600STDY6077906_TCATTGAG_L001_15986_1 lane1_3600STDY6077907_TGGCTCAG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077908_TATGCCAG_L001_15986_1 lane1_3600STDY6077909_TCAGATTC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077910_TACTAGTC_L001_15986_1 lane1_3600STDY6077911_TTCAGCTC_L001_15986_1 
#>                                      "0121"                                      "0221" 
#> lane1_3600STDY6077912_TGTCTATC_L001_15986_1 lane1_3600STDY6077913_TATGTGGC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077914_TTACTCGC_L001_15986_1 lane1_3600STDY6077915_TCGTTAGC_L001_15986_1 
#>                                      "0221"                                      "0121" 
#> lane1_3600STDY6077916_TACCGAGC_L001_15986_1 lane1_3600STDY6077917_TGTTCTCC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077918_TTCGCACC_L001_15986_1 lane1_3600STDY6077919_TTGCGTAC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077920_TCTACGAC_L001_15986_1 lane1_3600STDY6077921_TGACAGAC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077922_TAGAACAC_L001_15986_1 lane1_3600STDY6077923_TCATCCTA_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077924_TGCTGATA_L001_15986_1 lane1_3600STDY6077925_TAGACGGA_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077926_TGTGAAGA_L001_15986_1 lane1_3600STDY6077927_TCTCTTCA_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077928_TTGTTCCA_L001_15986_1 lane1_3600STDY6077929_TGAAGCCA_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077930_TACCACCA_L001_15986_1 lane1_3600STDY6077931_TGCGTGAA_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077932_GGTGAGTT_L001_15986_1 lane1_3600STDY6077933_GATCTCTT_L001_15986_1 
#>                                      "0121"                                      "0221" 
#> lane1_3600STDY6077934_GTGTCCTT_L001_15986_1 lane1_3600STDY6077935_GACGGATT_L001_15986_1 
#>                                      "0221"                                      "0121" 
#> lane1_3600STDY6077936_GCAACATT_L001_15986_1 lane1_3600STDY6077937_GGTCGTGT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077938_GAATCTGT_L001_15986_1 lane1_3600STDY6077939_GTACATCT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077940_GAGGTGCT_L001_15986_1 lane1_3600STDY6077941_GCATGGCT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077942_GTTAGCCT_L001_15986_1 lane1_3600STDY6077943_GTCGCTAT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077944_GGAATGAT_L001_15986_1 lane1_3600STDY6077945_GAGCCAAT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077946_GCTCCTTG_L001_15986_1 lane1_3600STDY6077947_GTAAGGTG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077948_GAGGATGG_L001_15986_1 lane1_3600STDY6077949_GTTGTCGG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077950_GGATTAGG_L001_15986_1 lane1_3600STDY6077951_GATAGAGG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077952_GTGTGTCG_L001_15986_1 lane1_3600STDY6077953_GCAATCCG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077954_GACCTTAG_L001_15986_1 lane1_3600STDY6077955_GCCTGTTC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077956_GCACTGTC_L001_15986_1 lane1_3600STDY6077957_GCTAACTC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077958_GATTCATC_L001_15986_1 lane1_3600STDY6077959_GTCTTGGC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane3_3600STDY6077960_ATCACGTT_L003_15987_1 lane3_3600STDY6077961_CGATGTTT_L003_15987_1 
#>                                      "0221"                                      "0221" 
#> lane3_3600STDY6077962_TTAGGCAT_L003_15987_1 lane3_3600STDY6077963_TGACCACT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077964_ACAGTGGT_L003_15987_1 lane3_3600STDY6077965_GCCAATGT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077966_CAGATCTG_L003_15987_1 lane3_3600STDY6077967_ACTTGATG_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077968_GATCAGCG_L003_15987_1 lane3_3600STDY6077969_TAGCTTGT_L003_15987_1 
#>                                      "0122"                                     "01233" 
#> lane3_3600STDY6077970_GGCTACAG_L003_15987_1 lane3_3600STDY6077971_CTTGTACT_L003_15987_1 
#>                                     "01232"                                     "01232" 
#> lane3_3600STDY6077972_TGGTTGTT_L003_15987_1 lane3_3600STDY6077973_TCTCGGTT_L003_15987_1 
#>                                     "01233"                                      "0122" 
#> lane3_3600STDY6077974_TAAGCGTT_L003_15987_1 lane3_3600STDY6077975_TCCGTCTT_L003_15987_1 
#>                                     "01231"                                     "01231" 
#> lane3_3600STDY6077976_TGTACCTT_L003_15987_1 lane3_3600STDY6077977_TTCTGTGT_L003_15987_1 
#>                                     "01232"                                      "0122" 
#> lane3_3600STDY6077978_TCTGCTGT_L003_15987_1 lane3_3600STDY6077979_TTGGAGGT_L003_15987_1 
#>                                      "0224"                                      "0122" 
#> lane3_3600STDY6077980_TCGAGCGT_L003_15987_1 lane3_3600STDY6077981_TGATACGT_L003_15987_1 
#>                                      "0122"                                     "01233" 
#> lane3_3600STDY6077982_TGCATAGT_L003_15987_1 lane3_3600STDY6077983_TTGACTCT_L003_15987_1 
#>                                      "0122"                                     "01233" 
#> lane3_3600STDY6077984_TGCGATCT_L003_15987_1 lane3_3600STDY6077985_TTCCTGCT_L003_15987_1 
#>                                     "01233"                                      "0122" 
#> lane3_3600STDY6077986_TAGTGACT_L003_15987_1 lane3_3600STDY6077987_TACAGGAT_L003_15987_1 
#>                                     "01233"                                     "01231" 
#> lane3_3600STDY6077988_TCCTCAAT_L003_15987_1 lane3_3600STDY6077989_TGTGGTTG_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077990_TAGTCTTG_L003_15987_1 lane3_3600STDY6077991_TTCCATTG_L003_15987_1 
#>                                      "0122"                                     "01233" 
#> lane3_3600STDY6077992_TCGAAGTG_L003_15987_1 lane3_3600STDY6077993_TAACGCTG_L003_15987_1 
#>                                      "0122"                                     "01231" 
#> lane3_3600STDY6077994_TTGGTATG_L003_15987_1 lane3_3600STDY6077995_TGAACTGG_L003_15987_1 
#>                                     "01231"                                     "01231" 
#> lane3_3600STDY6077996_TACTTCGG_L003_15987_1 lane3_3600STDY6077997_TCTCACGG_L003_15987_1 
#>                                      "0122"                                      "0224" 
#> lane3_3600STDY6077998_TCAGGAGG_L003_15987_1 lane3_3600STDY6077999_TAAGTTCG_L003_15987_1 
#>                                     "01231"                                     "01231" 
#> lane3_3600STDY6078000_TCCAGTCG_L003_15987_1 lane3_3600STDY6078001_TGTATGCG_L003_15987_1 
#>                                      "0122"                                      "0221" 
#> lane3_3600STDY6078002_TCATTGAG_L003_15987_1 lane3_3600STDY6078003_TGGCTCAG_L003_15987_1 
#>                                      "0342"                                      "0122" 
#> lane3_3600STDY6078004_TATGCCAG_L003_15987_1 lane3_3600STDY6078005_TCAGATTC_L003_15987_1 
#>                                      "0122"                                     "01231" 
#> lane3_3600STDY6078006_TACTAGTC_L003_15987_1 lane3_3600STDY6078007_TTCAGCTC_L003_15987_1 
#>                                     "01231"                                      "0122" 
#> lane3_3600STDY6078008_TGTCTATC_L003_15987_1 lane3_3600STDY6078009_TATGTGGC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078010_TTACTCGC_L003_15987_1 lane3_3600STDY6078011_TCGTTAGC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078012_TACCGAGC_L003_15987_1 lane3_3600STDY6078013_TGTTCTCC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078014_TTCGCACC_L003_15987_1 lane3_3600STDY6078015_TTGCGTAC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078016_TCTACGAC_L003_15987_1 lane3_3600STDY6078017_TGACAGAC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078018_TAGAACAC_L003_15987_1 lane3_3600STDY6078019_TCATCCTA_L003_15987_1 
#>                                     "01233"                                     "01233" 
#> lane3_3600STDY6078020_TGCTGATA_L003_15987_1 lane3_3600STDY6078021_TAGACGGA_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078022_TGTGAAGA_L003_15987_1 lane3_3600STDY6078023_TCTCTTCA_L003_15987_1 
#>                                     "01231"                                     "01233" 
#> lane3_3600STDY6078024_TTGTTCCA_L003_15987_1 lane3_3600STDY6078025_TGAAGCCA_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078026_TACCACCA_L003_15987_1 lane3_3600STDY6078027_TGCGTGAA_L003_15987_1 
#>                                     "01233"                                      "0221" 
#> lane3_3600STDY6078028_GGTGAGTT_L003_15987_1 lane3_3600STDY6078029_GATCTCTT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078030_GTGTCCTT_L003_15987_1 lane3_3600STDY6078031_GACGGATT_L003_15987_1 
#>                                     "01231"                                     "01232" 
#> lane3_3600STDY6078032_GCAACATT_L003_15987_1 lane3_3600STDY6078033_GGTCGTGT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078034_GAATCTGT_L003_15987_1 lane3_3600STDY6078035_GTACATCT_L003_15987_1 
#>                                      "0122"                                     "01233" 
#> lane3_3600STDY6078036_GAGGTGCT_L003_15987_1 lane3_3600STDY6078037_GCATGGCT_L003_15987_1 
#>                                     "01231"                                      "0122" 
#> lane3_3600STDY6078038_GTTAGCCT_L003_15987_1 lane3_3600STDY6078039_GTCGCTAT_L003_15987_1 
#>                                     "01233"                                     "01233" 
#> lane3_3600STDY6078040_GGAATGAT_L003_15987_1 lane3_3600STDY6078041_GAGCCAAT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078042_GCTCCTTG_L003_15987_1 lane3_3600STDY6078043_GTAAGGTG_L003_15987_1 
#>                                     "01231"                                     "01232" 
#> lane3_3600STDY6078044_GAGGATGG_L003_15987_1 lane3_3600STDY6078045_GTTGTCGG_L003_15987_1 
#>                                     "01232"                                     "01232" 
#> lane3_3600STDY6078046_GGATTAGG_L003_15987_1 lane3_3600STDY6078047_GATAGAGG_L003_15987_1 
#>                                     "01232"                                     "01232" 
#> lane3_3600STDY6078048_GTGTGTCG_L003_15987_1 lane3_3600STDY6078049_GCAATCCG_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078050_GACCTTAG_L003_15987_1 lane3_3600STDY6078051_GCCTGTTC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078052_GCACTGTC_L003_15987_1 lane3_3600STDY6078053_GCTAACTC_L003_15987_1 
#>                                      "0122"                                     "01232" 
#> lane3_3600STDY6078054_GATTCATC_L003_15987_1 lane3_3600STDY6078055_GTCTTGGC_L003_15987_1 
#>                                     "01232"                                     "01232" 
#> lane1_3600STDY6167693_ATCACGTT_L001_17236_1 lane1_3600STDY6167694_CGATGTTT_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167695_TTAGGCAT_L001_17236_1 lane1_3600STDY6167696_TGACCACT_L001_17236_1 
#>                                      "0342"                                       "011" 
#> lane1_3600STDY6167697_ACAGTGGT_L001_17236_1 lane1_3600STDY6167698_GCCAATGT_L001_17236_1 
#>                                      "0224"                                       "011" 
#> lane1_3600STDY6167699_CAGATCTG_L001_17236_1 lane1_3600STDY6167700_ACTTGATG_L001_17236_1 
#>                                       "011"                                      "0221" 
#> lane1_3600STDY6167701_GATCAGCG_L001_17236_1 lane1_3600STDY6167702_TAGCTTGT_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167703_GGCTACAG_L001_17236_1 lane1_3600STDY6167704_CTTGTACT_L001_17236_1 
#>                                       "014"                                      "0342" 
#> lane1_3600STDY6167705_TGGTTGTT_L001_17236_1 lane1_3600STDY6167706_TCTCGGTT_L001_17236_1 
#>                                       "014"                                      "0221" 
#> lane1_3600STDY6167707_TAAGCGTT_L001_17236_1 lane1_3600STDY6167708_TCCGTCTT_L001_17236_1 
#>                                      "0221"                                       "013" 
#> lane1_3600STDY6167709_TGTACCTT_L001_17236_1 lane1_3600STDY6167710_TTCTGTGT_L001_17236_1 
#>                                       "011"                                      "0221" 
#> lane1_3600STDY6167711_TCTGCTGT_L001_17236_1 lane1_3600STDY6167712_TTGGAGGT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167713_TCGAGCGT_L001_17236_1 lane1_3600STDY6167714_TGATACGT_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167715_TGCATAGT_L001_17236_1 lane1_3600STDY6167716_TTGACTCT_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167717_TGCGATCT_L001_17236_1 lane1_3600STDY6167718_TTCCTGCT_L001_17236_1 
#>                                       "013"                                      "0221" 
#> lane1_3600STDY6167719_TAGTGACT_L001_17236_1 lane1_3600STDY6167720_TACAGGAT_L001_17236_1 
#>                                      "0342"                                      "0342" 
#> lane1_3600STDY6167721_TCCTCAAT_L001_17236_1 lane1_3600STDY6167722_TGTGGTTG_L001_17236_1 
#>                                      "0342"                                       "011" 
#> lane1_3600STDY6167723_TAGTCTTG_L001_17236_1 lane1_3600STDY6167724_TTCCATTG_L001_17236_1 
#>                                       "011"                                      "0221" 
#> lane1_3600STDY6167725_TCGAAGTG_L001_17236_1 lane1_3600STDY6167726_TAACGCTG_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167727_TTGGTATG_L001_17236_1 lane1_3600STDY6167728_TGAACTGG_L001_17236_1 
#>                                       "013"                                      "0121" 
#> lane1_3600STDY6167729_TACTTCGG_L001_17236_1 lane1_3600STDY6167730_TCTCACGG_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167731_TCAGGAGG_L001_17236_1 lane1_3600STDY6167732_TAAGTTCG_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167733_TCCAGTCG_L001_17236_1 lane1_3600STDY6167734_TGTATGCG_L001_17236_1 
#>                                       "011"                                      "0221" 
#> lane1_3600STDY6167735_TCATTGAG_L001_17236_1 lane1_3600STDY6167736_TGGCTCAG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167737_TATGCCAG_L001_17236_1 lane1_3600STDY6167738_TCAGATTC_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167739_TACTAGTC_L001_17236_1 lane1_3600STDY6167740_TTCAGCTC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167741_TGTCTATC_L001_17236_1 lane1_3600STDY6167742_TATGTGGC_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167743_TTACTCGC_L001_17236_1 lane1_3600STDY6167744_TCGTTAGC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167745_TACCGAGC_L001_17236_1 lane1_3600STDY6167746_TGTTCTCC_L001_17236_1 
#>                                      "0342"                                       "011" 
#> lane1_3600STDY6167747_TTCGCACC_L001_17236_1 lane1_3600STDY6167748_TTGCGTAC_L001_17236_1 
#>                                      "0342"                                       "011" 
#> lane1_3600STDY6167749_TCTACGAC_L001_17236_1 lane1_3600STDY6167750_TGACAGAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167751_TAGAACAC_L001_17236_1 lane1_3600STDY6167752_TCATCCTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167753_TGCTGATA_L001_17236_1 lane1_3600STDY6167754_TAGACGGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167755_TGTGAAGA_L001_17236_1 lane1_3600STDY6167756_TCTCTTCA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167757_TTGTTCCA_L001_17236_1 lane1_3600STDY6167758_TGAAGCCA_L001_17236_1 
#>                                       "011"                                      "0221" 
#> lane1_3600STDY6167759_TACCACCA_L001_17236_1 lane1_3600STDY6167760_TGCGTGAA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167761_GGTGAGTT_L001_17236_1 lane1_3600STDY6167762_GATCTCTT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167763_GTGTCCTT_L001_17236_1 lane1_3600STDY6167764_GACGGATT_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167765_GCAACATT_L001_17236_1 lane1_3600STDY6167766_GGTCGTGT_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167767_GAATCTGT_L001_17236_1 lane1_3600STDY6167768_GTACATCT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167769_GAGGTGCT_L001_17236_1 lane1_3600STDY6167770_GCATGGCT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167771_GTTAGCCT_L001_17236_1 lane1_3600STDY6167772_GTCGCTAT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167773_GGAATGAT_L001_17236_1 lane1_3600STDY6167774_GAGCCAAT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167775_GCTCCTTG_L001_17236_1 lane1_3600STDY6167776_GTAAGGTG_L001_17236_1 
#>                                       "011"                                      "0221" 
#> lane1_3600STDY6167777_GAGGATGG_L001_17236_1 lane1_3600STDY6167778_GTTGTCGG_L001_17236_1 
#>                                       "011"                                      "0221" 
#> lane1_3600STDY6167779_GGATTAGG_L001_17236_1 lane1_3600STDY6167780_GATAGAGG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167781_GTGTGTCG_L001_17236_1 lane1_3600STDY6167782_GCAATCCG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167783_GACCTTAG_L001_17236_1 lane1_3600STDY6167784_GCCTGTTC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167785_GCACTGTC_L001_17236_1 lane1_3600STDY6167786_GCTAACTC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167787_GATTCATC_L001_17236_1 lane1_3600STDY6167788_GTCTTGGC_L001_17236_1 
#>                                       "011"                                      "0221" 
#> lane1_3600STDY6167789_GTAGAAGC_L001_17236_1 lane1_3600STDY6167790_GATGGTCC_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167791_GTGCTACC_L001_17236_1 lane1_3600STDY6167792_GCGATTAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167793_GGTTGGAC_L001_17236_1 lane1_3600STDY6167794_GGCACAAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167795_GACACTTA_L001_17236_1 lane1_3600STDY6167796_GTGCAGTA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167797_GGAGTCTA_L001_17236_1 lane1_3600STDY6167798_GCTATGGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167799_GAGTGCGA_L001_17236_1 lane1_3600STDY6167800_GTAACCGA_L001_17236_1 
#>                                      "0342"                                       "011" 
#> lane1_3600STDY6167801_GGCAAGCA_L001_17236_1 lane1_3600STDY6167802_GCCTTACA_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167803_GAACGACA_L001_17236_1 lane1_3600STDY6167804_GCAGGTAA_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167805_GCGTCGAA_L001_17236_1 lane1_3600STDY6167806_CGTTCGGT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167807_CACCAGGT_L001_17236_1 lane1_3600STDY6167808_CTGCGAGT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167809_CCGTATCT_L001_17236_1 lane1_3600STDY6167810_CGCTTCCT_L001_17236_1 
#>                                       "011"                                      "0222" 
#> lane1_3600STDY6167811_CAAGACCT_L001_17236_1 lane1_3600STDY6167812_CACACACT_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167813_CCTAGTAT_L001_17236_1 lane1_3600STDY6167814_CCACCGAT_L001_17236_1 
#>                                      "0221"                                       "011" 
#> lane1_3600STDY6167815_CTTCACAT_L001_17236_1 lane1_3600STDY6167816_CTATCATG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167817_CATGAATG_L001_17236_1 lane1_3600STDY6167818_CCACTTGG_L001_17236_1 
#>                                      "0342"                                       "011" 
#> lane1_3600STDY6167819_CTGTACGG_L001_17236_1 lane1_3600STDY6167820_CTAGATAG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167821_CACTCGAG_L001_17236_1 lane1_3600STDY6167822_CCGACAAG_L001_17236_1 
#>                                      "0342"                                       "013" 
#> lane1_3600STDY6167823_CTTGCTTC_L001_17236_1 lane1_3600STDY6167824_CATAGGTC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167825_CACATTGC_L001_17236_1 lane1_3600STDY6167826_CGCTAAGC_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167827_CAACCTCC_L001_17236_1 lane1_3600STDY6167828_CAGCTGAC_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167829_CTCAAGAC_L001_17236_1 lane1_3600STDY6167830_CGTGTCAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167831_CCATGCAC_L001_17236_1 lane1_3600STDY6167832_CGTTACTA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167833_CAAGTAGA_L001_17236_1 lane1_3600STDY6167834_CTCTCTCA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167835_CGACTGCA_L001_17236_1 lane1_3600STDY6167836_CCTGAGCA_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167837_CAGGCTAA_L001_17236_1 lane1_3600STDY6167838_CGGAGGAA_L001_17236_1 
#>                                       "014"                                       "011" 
#> lane1_3600STDY6167839_AGGAGATT_L001_17236_1 lane1_3600STDY6167840_AGGCAGCT_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167841_ACGTTCAT_L001_17236_1 lane1_3600STDY6167842_AACGTGTG_L001_17236_1 
#>                                      "0342"                                       "013" 
#> lane1_3600STDY6167843_AGACCGTG_L001_17236_1 lane1_3600STDY6167844_ACCTCTGG_L001_17236_1 
#>                                      "0342"                                      "0221" 
#> lane1_3600STDY6167845_ATCCTAGG_L001_17236_1 lane1_3600STDY6167846_ATCAACCG_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167847_AGGTCACG_L001_17236_1 lane1_3600STDY6167848_ACTGTTAG_L001_17236_1 
#>                                      "0221"                                       "013" 
#> lane1_3600STDY6167849_AAGAGTAG_L001_17236_1 lane1_3600STDY6167850_ATTCGGAG_L001_17236_1 
#>                                       "013"                                       "014" 
#> lane1_3600STDY6167851_ACGCAATC_L001_17236_1 lane1_3600STDY6167852_ACAAGTGC_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167853_ATGGATCC_L001_17236_1 lane1_3600STDY6167854_AGAGGACC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167855_ATCTCCAC_L001_17236_1 lane1_3600STDY6167856_ATTGGCTA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167857_AATCCTGA_L001_17236_1 lane1_3600STDY6167858_AGGATTCA_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6167859_AACTGGCA_L001_17236_1 lane1_3600STDY6167860_ACAACGCA_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167861_CGGAAACA_L001_17236_1 lane1_3600STDY6167862_AATGAATT_L001_17236_1 
#>                                      "0221"                                       "014" 
#> lane1_3600STDY6167863_TAGGACCC_L001_17236_1 lane1_3600STDY6167864_TCTCAGTG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167865_CATGGGAA_L001_17236_1 lane1_3600STDY6167866_CCTAAGAT_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167867_CTCAGATA_L001_17236_1 lane1_3600STDY6167868_CCCATAGG_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167869_GCTATGAC_L001_17236_1 lane1_3600STDY6167870_GCTGTGAA_L001_17236_1 
#>                                       "011"                                      "0221" 
#> lane1_3600STDY6167871_ACCTTCAA_L001_17236_1 lane1_3600STDY6167872_ACAAAGCC_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6167873_CAAAACCG_L001_17236_1 lane1_3600STDY6167874_GCTGGACA_L001_17236_1 
#>                                      "0221"                                       "014" 
#> lane1_3600STDY6167875_AAGTCGTA_L001_17236_1 lane1_3600STDY6167876_CATCCGTA_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167877_TTGTGTCT_L001_17236_1 lane1_3600STDY6167878_TGCTCTAG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167879_ACCCAACA_L001_17236_1 lane1_3600STDY6167880_CGATCTGA_L001_17236_1 
#>                                      "0221"                                       "011" 
#> lane1_3600STDY6167881_GTTCCACG_L001_17236_1 lane1_3600STDY6167882_ACTCTTTC_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167883_TATTGGAG_L001_17236_1 lane1_3600STDY6167884_TAAACATA_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6167885_GTAAGATA_L001_17236_1 lane1_3600STDY6167886_TACCGCAA_L001_17236_1 
#>                                      "0342"                                       "013" 
#> lane1_3600STDY6167887_TATCTCCT_L001_17236_1 lane1_3600STDY6167888_TGTCATCT_L001_17236_1 
#>                                      "0342"                                       "011" 
#> lane1_3600STDY6167889_ATAGCTCT_L001_17236_1 lane1_3600STDY6167890_AGTCCAAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167891_TTTGGGCA_L001_17236_1 lane1_3600STDY6167892_TCTGACGC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167893_TGTCGACT_L001_17236_1 lane1_3600STDY6167894_GTCACGTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167895_TTGAGCGA_L001_17236_1 lane1_3600STDY6167896_GAGACATA_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167897_GTCAAGCT_L001_17236_1 lane1_3600STDY6167898_AGCAAGTT_L001_17236_1 
#>                                       "023"                                      "0342" 
#> lane1_3600STDY6167899_GACGCTCA_L001_17236_1 lane1_3600STDY6167900_ACGGCAGC_L001_17236_1 
#>                                       "011"                                      "0342" 
#> lane1_3600STDY6167901_AGAACTGA_L001_17236_1 lane1_3600STDY6167902_CGCCTTTG_L001_17236_1 
#>                                      "0342"                                       "011" 
#> lane1_3600STDY6167903_TAAGGTCA_L001_17236_1 lane1_3600STDY6167904_ACGTTGGC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167905_CCAGCTTA_L001_17236_1 lane1_3600STDY6167906_GAATCCTA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167907_ACTTCGTA_L001_17236_1 lane1_3600STDY6167908_TAGTCGGT_L001_17236_1 
#>                                       "013"                                      "0221" 
#> lane1_3600STDY6167909_CGCACGAG_L001_17236_1 lane1_3600STDY6167910_ACGTACTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167911_AGCGCCAA_L001_17236_1 lane1_3600STDY6167912_GCCTGCCC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167913_AGGACGAT_L001_17236_1 lane1_3600STDY6167914_CTTGACCG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167915_AGGTCTAA_L001_17236_1 lane1_3600STDY6167916_CGAGATCC_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167917_ATTAGCGG_L001_17236_1 lane1_3600STDY6167918_GCGCTGAT_L001_17236_1 
#>                                       "011"                                      "0221" 
#> lane1_3600STDY6167919_TGCTGAAC_L001_17236_1 lane1_3600STDY6167920_GAGGGCAG_L001_17236_1 
#>                                       "014"                                      "0221" 
#> lane1_3600STDY6167921_GTTTTCAC_L001_17236_1 lane1_3600STDY6167922_GAGATGCC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167923_TTGAGAAG_L001_17236_1 lane1_3600STDY6167924_GCATCCGG_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167925_GTCACCAG_L001_17236_1 lane1_3600STDY6167926_GAGGTCGC_L001_17236_1 
#>                                       "011"                                      "0342" 
#> lane1_3600STDY6167927_AAGGGGTA_L001_17236_1 lane1_3600STDY6167928_TTTTACGT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167929_TTCCTACA_L001_17236_1 lane1_3600STDY6167930_AGTGTAGT_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167931_GTGGCCAA_L001_17236_1 lane1_3600STDY6167932_AAATACTC_L001_17236_1 
#>                                       "013"                                       "014" 
#> lane1_3600STDY6167933_CACCCGTC_L001_17236_1 lane1_3600STDY6167934_TCGTGGTT_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167935_ACTTGGGG_L001_17236_1 lane1_3600STDY6167936_GGCTGCTT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167937_CAGGGTCG_L001_17236_1 lane1_3600STDY6167938_CTCGTCGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167939_TCTACAGT_L001_17236_1 lane1_3600STDY6167940_CTTCTAGA_L001_17236_1 
#>                                       "011"                                      "0342" 
#> lane1_3600STDY6167941_AACGGCTT_L001_17236_1 lane1_3600STDY6167942_ATAAGACT_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167943_GTTTTTCG_L001_17236_1 lane1_3600STDY6167944_ATTGGTAT_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167945_CGCCAGTA_L001_17236_1 lane1_3600STDY6167946_AAGCCGAA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167947_TGACCCAC_L001_17236_1 lane1_3600STDY6167948_ATTGCACA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167949_CTTTTGAT_L001_17236_1 lane1_3600STDY6167950_TAGCGAGA_L001_17236_1 
#>                                       "011"                                      "0221" 
#> lane1_3600STDY6167951_TTCGCAGG_L001_17236_1 lane1_3600STDY6167952_TAGTTATT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167953_TCCTCCGA_L001_17236_1 lane1_3600STDY6167954_GCGGGTCT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167955_GATTCTAT_L001_17236_1 lane1_3600STDY6167956_ATGCAAAG_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167957_GTCTGAGG_L001_17236_1 lane1_3600STDY6167958_TCTGGCGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167959_AATTTGCG_L001_17236_1 lane1_3600STDY6167960_TGGGTTGG_L001_17236_1 
#>                                       "011"                                      "0342" 
#> lane1_3600STDY6167961_AGTTGAAA_L001_17236_1 lane1_3600STDY6167962_GACCGGAA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167963_GATCGAAC_L001_17236_1 lane1_3600STDY6167964_GTATAGGG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167965_GGTAAGAG_L001_17236_1 lane1_3600STDY6167966_AGTCCGAT_L001_17236_1 
#>                                      "0221"                                       "011" 
#> lane1_3600STDY6167967_ATACAGGC_L001_17236_1 lane1_3600STDY6167968_TGAGACTC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167969_ACTCAGGA_L001_17236_1 lane1_3600STDY6167970_GTGTCTGA_L001_17236_1 
#>                                       "011"                                      "0342" 
#> lane1_3600STDY6167971_CTTGAATC_L001_17236_1 lane1_3600STDY6167972_CCGCATGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167973_AAGTAACA_L001_17236_1 lane1_3600STDY6167974_GTGGTACT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167975_AGCTGTGC_L001_17236_1 lane1_3600STDY6167976_TTACCTTC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167977_TCCGGGTA_L001_17236_1 lane1_3600STDY6167978_CTACGTAA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167979_TCGGACCG_L001_17236_1 lane1_3600STDY6167980_ATGCGTCG_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167981_TTCTTAGC_L001_17236_1 lane1_3600STDY6167982_TGAGTAAG_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167983_AAGTGATA_L001_17236_1 lane1_3600STDY6167984_TCGATGCG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167985_TATTCTGG_L001_17236_1 lane1_3600STDY6167986_AGCCGTGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167987_AAGCCTTC_L001_17236_1 lane1_3600STDY6167988_AGGTATCC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167989_AGGATCTC_L001_17236_1 lane1_3600STDY6167990_CTGTTTGA_L001_17236_1 
#>                                      "0221"                                       "011" 
#> lane1_3600STDY6167991_GGAATTTC_L001_17236_1 lane1_3600STDY6167992_TTGGAGCA_L001_17236_1 
#>                                       "013"                                      "0342" 
#> lane1_3600STDY6167993_AAGGTCTG_L001_17236_1 lane1_3600STDY6167994_AATTAGGC_L001_17236_1 
#>                                      "0342"                                       "011" 
#> lane1_3600STDY6167995_AATCGGGT_L001_17236_1 lane1_3600STDY6167996_AGGTAGAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167997_CTTATTCC_L001_17236_1 lane1_3600STDY6167998_CAGGCTCT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167999_AAAGCACG_L001_17236_1 lane1_3600STDY6168000_GTATACAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168001_GGACATAT_L001_17236_1 lane1_3600STDY6168002_CGGTTGGG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168003_GTCCGTGA_L001_17236_1 lane1_3600STDY6168004_GCCGAACC_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6168005_ACTTTACT_L001_17236_1 lane1_3600STDY6168006_GGGTCCAT_L001_17236_1 
#>                                      "0342"                                       "013" 
#> lane1_3600STDY6168007_ATAACTAG_L001_17236_1 lane1_3600STDY6168008_AATAGAGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168009_TCACCATT_L001_17236_1 lane1_3600STDY6168010_CGCCTGAT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168011_GCGTGAAC_L001_17236_1 lane1_3600STDY6168012_TAAGGGTG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168013_GGTGTCGA_L001_17236_1 lane1_3600STDY6168014_CCGTTAGG_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6168015_TGGCAAAA_L001_17236_1 lane1_3600STDY6168016_CCTACCCG_L001_17236_1 
#>                                       "011"                                      "0222" 
#> lane1_3600STDY6168017_AACAGCGC_L001_17236_1 lane1_3600STDY6168018_TATACATC_L001_17236_1 
#>                                       "013"                                      "0221" 
#> lane1_3600STDY6168019_AAGCGACT_L001_17236_1 lane1_3600STDY6168020_GAAGCGCA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168021_ACCTCTAC_L001_17236_1 lane1_3600STDY6168022_GATTGCGT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168023_GCTGGTTG_L001_17236_1 lane1_3600STDY6168024_ATCGTCCT_L001_17236_1 
#>                                      "0221"                                       "011" 
#> lane1_3600STDY6168025_GGACACGG_L001_17236_1 lane1_3600STDY6168026_CGCACCTA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168027_CTTCGGCT_L001_17236_1 lane1_3600STDY6168028_CGAATCGA_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6168029_TAACAACT_L001_17236_1 lane1_3600STDY6168030_AGCTCTTT_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168031_TAATCCCT_L001_17236_1 lane1_3600STDY6168032_AGGACACT_L001_17236_1 
#>                                       "011"                                      "0342" 
#> lane1_3600STDY6168033_TTACACTA_L001_17236_1 lane1_3600STDY6168034_AAACATCA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168035_CCATAGCT_L001_17236_1 lane1_3600STDY6168036_GTTATGGC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168037_ATCCCCTA_L001_17236_1 lane1_3600STDY6168038_CATACTAC_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6168039_CAATTGTT_L001_17236_1 lane1_3600STDY6168040_AAACCCGT_L001_17236_1 
#>                                       "014"                                      "0221" 
#> lane1_3600STDY6168041_CAGATTTC_L001_17236_1 lane1_3600STDY6168042_GCGTAGGT_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6168043_GGCATTCG_L001_17236_1 lane1_3600STDY6168044_TGGGGCTT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168045_CTGACTAC_L001_17236_1 lane1_3600STDY6168046_AACTTTTA_L001_17236_1 
#>                                       "011"                                      "0342" 
#> lane1_3600STDY6168047_AGGGATTC_L001_17236_1 lane1_3600STDY6168048_CCGAGTAG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168049_GGGGACTA_L001_17236_1 lane1_3600STDY6168050_GGAGTTGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168051_AGCTCATC_L001_17236_1 lane1_3600STDY6168052_TAATCAAC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168053_ACTGGTCG_L001_17236_1 lane1_3600STDY6168054_GACGATTG_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168055_AGCGATGA_L001_17236_1 lane1_3600STDY6168056_GAAGAGAT_L001_17236_1 
#>                                       "011"                                      "0342" 
#> lane1_3600STDY6168057_CGTATGCA_L001_17236_1 lane1_3600STDY6168058_CACGTGCG_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6168059_GCTTAAAC_L001_17236_1 lane1_3600STDY6168060_GTTCCGCA_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6168061_GTATCGTC_L001_17236_1 lane1_3600STDY6168062_GTCCTCAC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168063_GTACGGAC_L001_17236_1 lane1_3600STDY6168064_CATTTTGC_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6168065_TCCTCTCT_L001_17236_1 lane1_3600STDY6168066_AGCAACGA_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6168067_ACAGAAGA_L001_17236_1 lane1_3600STDY6168068_CGACCCTT_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6168069_CTGCCTAG_L001_17236_1 lane1_3600STDY6168070_GAGCGCAT_L001_17236_1 
#>                                      "0221"                                       "013" 
#> lane1_3600STDY6168071_AACTTATC_L001_17236_1 lane1_3600STDY6168072_CCGATGTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168073_TTACTACC_L001_17236_1 lane1_3600STDY6168074_CAAGGAGC_L001_17236_1 
#>                                       "013"                                       "014" 
#> lane1_3600STDY6168075_TGGTTGAC_L001_17236_1 lane1_3600STDY6168076_ACCTGCTG_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane4_3600STDY6184181_ATCACGTT_L004_17480_1 lane4_3600STDY6184182_CGATGTTT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184183_TTAGGCAT_L004_17480_1 lane4_3600STDY6184184_TGACCACT_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184185_ACAGTGGT_L004_17480_1 lane4_3600STDY6184186_GCCAATGT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184187_CAGATCTG_L004_17480_1 lane4_3600STDY6184188_ACTTGATG_L004_17480_1 
#>                                       "032"                                      "0211" 
#> lane4_3600STDY6184189_GATCAGCG_L004_17480_1 lane4_3600STDY6184190_TAGCTTGT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184191_GGCTACAG_L004_17480_1 lane4_3600STDY6184192_CTTGTACT_L004_17480_1 
#>                                       "032"                                      "0211" 
#> lane4_3600STDY6184193_TGGTTGTT_L004_17480_1 lane4_3600STDY6184194_TCTCGGTT_L004_17480_1 
#>                                       "032"                                       "031" 
#> lane4_3600STDY6184195_TAAGCGTT_L004_17480_1 lane4_3600STDY6184196_TCCGTCTT_L004_17480_1 
#>                                       "031"                                      "0341" 
#> lane4_3600STDY6184197_TGTACCTT_L004_17480_1 lane4_3600STDY6184198_TTCTGTGT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184199_TCTGCTGT_L004_17480_1 lane4_3600STDY6184200_TTGGAGGT_L004_17480_1 
#>                                      "0212"                                      "0212" 
#> lane4_3600STDY6184201_TCGAGCGT_L004_17480_1 lane4_3600STDY6184202_TGATACGT_L004_17480_1 
#>                                       "031"                                       "032" 
#> lane4_3600STDY6184203_TGCATAGT_L004_17480_1 lane4_3600STDY6184204_TTGACTCT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184205_TGCGATCT_L004_17480_1 lane4_3600STDY6184206_TTCCTGCT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184207_TAGTGACT_L004_17480_1 lane4_3600STDY6184208_TACAGGAT_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184209_TCCTCAAT_L004_17480_1 lane4_3600STDY6184210_TGTGGTTG_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184211_TAGTCTTG_L004_17480_1 lane4_3600STDY6184212_TTCCATTG_L004_17480_1 
#>                                      "0212"                                      "0211" 
#> lane4_3600STDY6184213_TCGAAGTG_L004_17480_1 lane4_3600STDY6184214_TAACGCTG_L004_17480_1 
#>                                      "0221"                                      "0341" 
#> lane4_3600STDY6184215_TTGGTATG_L004_17480_1 lane4_3600STDY6184216_TGAACTGG_L004_17480_1 
#>                                      "0213"                                      "0222" 
#> lane4_3600STDY6184217_TACTTCGG_L004_17480_1 lane4_3600STDY6184218_TCTCACGG_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184219_TCAGGAGG_L004_17480_1 lane4_3600STDY6184220_TAAGTTCG_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184221_TCCAGTCG_L004_17480_1 lane4_3600STDY6184222_TGTATGCG_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184223_TCATTGAG_L004_17480_1 lane4_3600STDY6184224_TGGCTCAG_L004_17480_1 
#>                                      "0212"                                      "0213" 
#> lane4_3600STDY6184225_TATGCCAG_L004_17480_1 lane4_3600STDY6184226_TCAGATTC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184227_TACTAGTC_L004_17480_1 lane4_3600STDY6184228_TTCAGCTC_L004_17480_1 
#>                                      "0212"                                       "032" 
#> lane4_3600STDY6184229_TGTCTATC_L004_17480_1 lane4_3600STDY6184230_TATGTGGC_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184231_TTACTCGC_L004_17480_1 lane4_3600STDY6184232_TCGTTAGC_L004_17480_1 
#>                                      "0213"                                      "0341" 
#> lane4_3600STDY6184233_TACCGAGC_L004_17480_1 lane4_3600STDY6184234_TGTTCTCC_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184235_TTCGCACC_L004_17480_1 lane4_3600STDY6184236_TTGCGTAC_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184237_TCTACGAC_L004_17480_1 lane4_3600STDY6184238_TGACAGAC_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184239_TAGAACAC_L004_17480_1 lane4_3600STDY6184240_TCATCCTA_L004_17480_1 
#>                                      "0212"                                      "0212" 
#> lane4_3600STDY6184241_TGCTGATA_L004_17480_1 lane4_3600STDY6184242_TAGACGGA_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184243_TGTGAAGA_L004_17480_1 lane4_3600STDY6184244_TCTCTTCA_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184245_TTGTTCCA_L004_17480_1 lane4_3600STDY6184246_TGAAGCCA_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184247_TACCACCA_L004_17480_1 lane4_3600STDY6184248_TGCGTGAA_L004_17480_1 
#>                                      "0222"                                      "0212" 
#> lane4_3600STDY6184249_GGTGAGTT_L004_17480_1 lane4_3600STDY6184250_GATCTCTT_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184251_GTGTCCTT_L004_17480_1 lane4_3600STDY6184252_GACGGATT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184253_GCAACATT_L004_17480_1 lane4_3600STDY6184254_GGTCGTGT_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184255_GAATCTGT_L004_17480_1 lane4_3600STDY6184256_GTACATCT_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184257_GAGGTGCT_L004_17480_1 lane4_3600STDY6184258_GCATGGCT_L004_17480_1 
#>                                       "023"                                      "0211" 
#> lane4_3600STDY6184259_GTTAGCCT_L004_17480_1 lane4_3600STDY6184260_GTCGCTAT_L004_17480_1 
#>                                      "0211"                                      "0222" 
#> lane4_3600STDY6184261_GGAATGAT_L004_17480_1 lane4_3600STDY6184262_GAGCCAAT_L004_17480_1 
#>                                       "023"                                      "0212" 
#> lane4_3600STDY6184263_GCTCCTTG_L004_17480_1 lane4_3600STDY6184264_GTAAGGTG_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184265_GAGGATGG_L004_17480_1 lane4_3600STDY6184266_GTTGTCGG_L004_17480_1 
#>                                      "0211"                                       "032" 
#> lane4_3600STDY6184267_GGATTAGG_L004_17480_1 lane4_3600STDY6184268_GATAGAGG_L004_17480_1 
#>                                      "0213"                                      "0211" 
#> lane4_3600STDY6184269_GTGTGTCG_L004_17480_1 lane4_3600STDY6184270_GCAATCCG_L004_17480_1 
#>                                      "0341"                                       "023" 
#> lane4_3600STDY6184271_GACCTTAG_L004_17480_1 lane4_3600STDY6184272_GCCTGTTC_L004_17480_1 
#>                                      "0222"                                      "0211" 
#> lane4_3600STDY6184273_GCACTGTC_L004_17480_1 lane4_3600STDY6184274_GCTAACTC_L004_17480_1 
#>                                      "0211"                                      "0341" 
#> lane4_3600STDY6184275_GATTCATC_L004_17480_1 lane4_3600STDY6184276_GTCTTGGC_L004_17480_1 
#>                                      "0213"                                       "032" 
#> lane4_3600STDY6184277_GTAGAAGC_L004_17480_1 lane4_3600STDY6184278_GATGGTCC_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184279_GTGCTACC_L004_17480_1 lane4_3600STDY6184280_GCGATTAC_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184281_GGTTGGAC_L004_17480_1 lane4_3600STDY6184282_GGCACAAC_L004_17480_1 
#>                                      "0341"                                      "0222" 
#> lane4_3600STDY6184283_GACACTTA_L004_17480_1 lane4_3600STDY6184284_GTGCAGTA_L004_17480_1 
#>                                      "0211"                                      "0341" 
#> lane4_3600STDY6184285_GGAGTCTA_L004_17480_1 lane4_3600STDY6184286_GCTATGGA_L004_17480_1 
#>                                      "0212"                                      "0211" 
#> lane4_3600STDY6184287_GAGTGCGA_L004_17480_1 lane4_3600STDY6184288_GTAACCGA_L004_17480_1 
#>                                      "0212"                                      "0212" 
#> lane4_3600STDY6184289_GGCAAGCA_L004_17480_1 lane4_3600STDY6184290_GCCTTACA_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184291_GAACGACA_L004_17480_1 lane4_3600STDY6184292_GCAGGTAA_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184293_GCGTCGAA_L004_17480_1 lane4_3600STDY6184294_CGTTCGGT_L004_17480_1 
#>                                      "0341"                                      "0222" 
#> lane4_3600STDY6184295_CACCAGGT_L004_17480_1 lane4_3600STDY6184296_CTGCGAGT_L004_17480_1 
#>                                      "0211"                                      "0341" 
#> lane4_3600STDY6184297_CCGTATCT_L004_17480_1 lane4_3600STDY6184298_CGCTTCCT_L004_17480_1 
#>                                      "0211"                                      "0341" 
#> lane4_3600STDY6184299_CAAGACCT_L004_17480_1 lane4_3600STDY6184300_CACACACT_L004_17480_1 
#>                                      "0211"                                       "032" 
#> lane4_3600STDY6184301_CCTAGTAT_L004_17480_1 lane4_3600STDY6184302_CCACCGAT_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184303_CTTCACAT_L004_17480_1 lane4_3600STDY6184304_CTATCATG_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184305_CATGAATG_L004_17480_1 lane4_3600STDY6184306_CCACTTGG_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184307_CTGTACGG_L004_17480_1 lane4_3600STDY6184308_CTAGATAG_L004_17480_1 
#>                                      "0211"                                      "0341" 
#> lane4_3600STDY6184309_CACTCGAG_L004_17480_1 lane4_3600STDY6184310_CCGACAAG_L004_17480_1 
#>                                      "0222"                                       "032" 
#> lane4_3600STDY6184311_CTTGCTTC_L004_17480_1 lane4_3600STDY6184312_CATAGGTC_L004_17480_1 
#>                                      "0212"                                      "0222" 
#> lane4_3600STDY6184313_CACATTGC_L004_17480_1 lane4_3600STDY6184314_CGCTAAGC_L004_17480_1 
#>                                      "0213"                                      "0212" 
#> lane4_3600STDY6184315_CAACCTCC_L004_17480_1 lane4_3600STDY6184316_CAGCTGAC_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184317_CTCAAGAC_L004_17480_1 lane4_3600STDY6184318_CGTGTCAC_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184319_CCATGCAC_L004_17480_1 lane4_3600STDY6184320_CGTTACTA_L004_17480_1 
#>                                      "0222"                                      "0341" 
#> lane4_3600STDY6184321_CAAGTAGA_L004_17480_1 lane4_3600STDY6184322_CTCTCTCA_L004_17480_1 
#>                                      "0213"                                      "0211" 
#> lane4_3600STDY6184323_CGACTGCA_L004_17480_1 lane4_3600STDY6184324_CCTGAGCA_L004_17480_1 
#>                                      "0212"                                      "0222" 
#> lane4_3600STDY6184325_CAGGCTAA_L004_17480_1 lane4_3600STDY6184326_CGGAGGAA_L004_17480_1 
#>                                       "032"                                      "0211" 
#> lane4_3600STDY6184327_AGGAGATT_L004_17480_1 lane4_3600STDY6184328_AGGCAGCT_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184329_ACGTTCAT_L004_17480_1 lane4_3600STDY6184330_AACGTGTG_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184331_AGACCGTG_L004_17480_1 lane4_3600STDY6184332_ACCTCTGG_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184333_ATCCTAGG_L004_17480_1 lane4_3600STDY6184334_ATCAACCG_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184335_AGGTCACG_L004_17480_1 lane4_3600STDY6184336_ACTGTTAG_L004_17480_1 
#>                                       "032"                                      "0211" 
#> lane4_3600STDY6184337_AAGAGTAG_L004_17480_1 lane4_3600STDY6184338_ATTCGGAG_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184339_ACGCAATC_L004_17480_1 lane4_3600STDY6184340_ACAAGTGC_L004_17480_1 
#>                                      "0213"                                      "0211" 
#> lane4_3600STDY6184341_ATGGATCC_L004_17480_1 lane4_3600STDY6184342_AGAGGACC_L004_17480_1 
#>                                      "0212"                                      "0222" 
#> lane4_3600STDY6184343_ATCTCCAC_L004_17480_1 lane4_3600STDY6184344_ATTGGCTA_L004_17480_1 
#>                                      "0213"                                      "0212" 
#> lane4_3600STDY6184345_AATCCTGA_L004_17480_1 lane4_3600STDY6184346_AGGATTCA_L004_17480_1 
#>                                       "032"                                      "0222" 
#> lane4_3600STDY6184347_AACTGGCA_L004_17480_1 lane4_3600STDY6184348_ACAACGCA_L004_17480_1 
#>                                      "0221"                                      "0222" 
#> lane4_3600STDY6184349_CGGAAACA_L004_17480_1 lane4_3600STDY6184350_AATGAATT_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184351_TAGGACCC_L004_17480_1 lane4_3600STDY6184352_TCTCAGTG_L004_17480_1 
#>                                      "0341"                                      "0222" 
#> lane4_3600STDY6184353_CATGGGAA_L004_17480_1 lane4_3600STDY6184354_CCTAAGAT_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184355_CTCAGATA_L004_17480_1 lane4_3600STDY6184356_CCCATAGG_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184357_GCTATGAC_L004_17480_1 lane4_3600STDY6184358_GCTGTGAA_L004_17480_1 
#>                                      "0222"                                      "0222" 
#> lane4_3600STDY6184359_ACCTTCAA_L004_17480_1 lane4_3600STDY6184360_ACAAAGCC_L004_17480_1 
#>                                      "0223"                                      "0221" 
#> lane4_3600STDY6184361_CAAAACCG_L004_17480_1 lane4_3600STDY6184362_GCTGGACA_L004_17480_1 
#>                                      "0211"                                       "032" 
#> lane4_3600STDY6184363_AAGTCGTA_L004_17480_1 lane4_3600STDY6184364_CATCCGTA_L004_17480_1 
#>                                      "0211"                                       "023" 
#> lane4_3600STDY6184365_TTGTGTCT_L004_17480_1 lane4_3600STDY6184366_TGCTCTAG_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184367_ACCCAACA_L004_17480_1 lane4_3600STDY6184368_CGATCTGA_L004_17480_1 
#>                                      "0222"                                      "0211" 
#> lane4_3600STDY6184369_GTTCCACG_L004_17480_1 lane4_3600STDY6184370_ACTCTTTC_L004_17480_1 
#>                                      "0212"                                      "0213" 
#> lane4_3600STDY6184371_TATTGGAG_L004_17480_1 lane4_3600STDY6184372_TAAACATA_L004_17480_1 
#>                                      "0221"                                      "0221" 
#> lane4_3600STDY6184373_GTAAGATA_L004_17480_1 lane4_3600STDY6184374_TACCGCAA_L004_17480_1 
#>                                      "0223"                                       "032" 
#> lane4_3600STDY6184375_TATCTCCT_L004_17480_1 lane4_3600STDY6184376_TGTCATCT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184377_ATAGCTCT_L004_17480_1 lane4_3600STDY6184378_AGTCCAAC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184379_TTTGGGCA_L004_17480_1 lane4_3600STDY6184380_TCTGACGC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184381_TGTCGACT_L004_17480_1 lane4_3600STDY6184382_GTCACGTA_L004_17480_1 
#>                                       "032"                                       "031" 
#> lane4_3600STDY6184383_TTGAGCGA_L004_17480_1 lane4_3600STDY6184384_GAGACATA_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184385_GTCAAGCT_L004_17480_1 lane4_3600STDY6184386_AGCAAGTT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184387_GACGCTCA_L004_17480_1 lane4_3600STDY6184388_ACGGCAGC_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184389_AGAACTGA_L004_17480_1 lane4_3600STDY6184390_CGCCTTTG_L004_17480_1 
#>                                      "0212"                                      "0222" 
#> lane4_3600STDY6184391_TAAGGTCA_L004_17480_1 lane4_3600STDY6184392_ACGTTGGC_L004_17480_1 
#>                                      "0222"                                      "0212" 
#> lane4_3600STDY6184393_CCAGCTTA_L004_17480_1 lane4_3600STDY6184394_GAATCCTA_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184395_ACTTCGTA_L004_17480_1 lane4_3600STDY6184396_TAGTCGGT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184397_CGCACGAG_L004_17480_1 lane4_3600STDY6184398_ACGTACTA_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184399_AGCGCCAA_L004_17480_1 lane4_3600STDY6184400_GCCTGCCC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184401_AGGACGAT_L004_17480_1 lane4_3600STDY6184402_CTTGACCG_L004_17480_1 
#>                                      "0213"                                       "032" 
#> lane4_3600STDY6184403_AGGTCTAA_L004_17480_1 lane4_3600STDY6184404_CGAGATCC_L004_17480_1 
#>                                      "0213"                                       "032" 
#> lane4_3600STDY6184405_ATTAGCGG_L004_17480_1 lane4_3600STDY6184406_GCGCTGAT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184407_TGCTGAAC_L004_17480_1 lane4_3600STDY6184408_GAGGGCAG_L004_17480_1 
#>                                       "032"                                      "0213" 
#> lane4_3600STDY6184409_GTTTTCAC_L004_17480_1 lane4_3600STDY6184410_GAGATGCC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184411_TTGAGAAG_L004_17480_1 lane4_3600STDY6184412_GCATCCGG_L004_17480_1 
#>                                       "032"                                       "023" 
#> lane4_3600STDY6184413_GTCACCAG_L004_17480_1 lane4_3600STDY6184414_GAGGTCGC_L004_17480_1 
#>                                      "0211"                                      "0222" 
#> lane4_3600STDY6184415_AAGGGGTA_L004_17480_1 lane4_3600STDY6184416_TTTTACGT_L004_17480_1 
#>                                      "0212"                                      "0211" 
#> lane4_3600STDY6184417_TTCCTACA_L004_17480_1 lane4_3600STDY6184418_AGTGTAGT_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184419_GTGGCCAA_L004_17480_1 lane4_3600STDY6184420_AAATACTC_L004_17480_1 
#>                                      "0212"                                       "032" 
#> lane4_3600STDY6184421_CACCCGTC_L004_17480_1 lane4_3600STDY6184422_TCGTGGTT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184423_ACTTGGGG_L004_17480_1 lane4_3600STDY6184424_GGCTGCTT_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184425_CAGGGTCG_L004_17480_1 lane4_3600STDY6184426_CTCGTCGA_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184427_TCTACAGT_L004_17480_1 lane4_3600STDY6184428_CTTCTAGA_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184429_AACGGCTT_L004_17480_1 lane4_3600STDY6184430_ATAAGACT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184431_GTTTTTCG_L004_17480_1 lane4_3600STDY6184432_ATTGGTAT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184433_CGCCAGTA_L004_17480_1 lane4_3600STDY6184434_AAGCCGAA_L004_17480_1 
#>                                      "0223"                                       "032" 
#> lane4_3600STDY6184435_TGACCCAC_L004_17480_1 lane4_3600STDY6184436_ATTGCACA_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184437_CTTTTGAT_L004_17480_1 lane4_3600STDY6184438_TAGCGAGA_L004_17480_1 
#>                                      "0213"                                      "0222" 
#> lane4_3600STDY6184439_TTCGCAGG_L004_17480_1 lane4_3600STDY6184440_TAGTTATT_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184441_TCCTCCGA_L004_17480_1 lane4_3600STDY6184442_GCGGGTCT_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184443_GATTCTAT_L004_17480_1 lane4_3600STDY6184444_ATGCAAAG_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184445_GTCTGAGG_L004_17480_1 lane4_3600STDY6184446_TCTGGCGA_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184447_AATTTGCG_L004_17480_1 lane4_3600STDY6184448_TGGGTTGG_L004_17480_1 
#>                                      "0222"                                       "023" 
#> lane4_3600STDY6184449_AGTTGAAA_L004_17480_1 lane4_3600STDY6184450_GACCGGAA_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184451_GATCGAAC_L004_17480_1 lane4_3600STDY6184452_GTATAGGG_L004_17480_1 
#>                                      "0342"                                      "0341" 
#> lane4_3600STDY6184453_GGTAAGAG_L004_17480_1 lane4_3600STDY6184454_AGTCCGAT_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184455_ATACAGGC_L004_17480_1 lane4_3600STDY6184456_TGAGACTC_L004_17480_1 
#>                                      "0213"                                      "0222" 
#> lane4_3600STDY6184457_ACTCAGGA_L004_17480_1 lane4_3600STDY6184458_GTGTCTGA_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184459_CTTGAATC_L004_17480_1 lane4_3600STDY6184460_CCGCATGA_L004_17480_1 
#>                                      "0211"                                      "0222" 
#> lane4_3600STDY6184461_AAGTAACA_L004_17480_1 lane4_3600STDY6184462_GTGGTACT_L004_17480_1 
#>                                      "0222"                                      "0222" 
#> lane4_3600STDY6184463_AGCTGTGC_L004_17480_1 lane4_3600STDY6184464_TTACCTTC_L004_17480_1 
#>                                      "0222"                                      "0222" 
#> lane4_3600STDY6184465_TCCGGGTA_L004_17480_1 lane4_3600STDY6184466_CTACGTAA_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184467_TCGGACCG_L004_17480_1 lane4_3600STDY6184468_ATGCGTCG_L004_17480_1 
#>                                      "0211"                                       "032" 
#> lane4_3600STDY6184469_TTCTTAGC_L004_17480_1 lane4_3600STDY6184470_TGAGTAAG_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184471_AAGTGATA_L004_17480_1 lane4_3600STDY6184472_TCGATGCG_L004_17480_1 
#>                                      "0213"                                      "0341" 
#> lane4_3600STDY6184473_TATTCTGG_L004_17480_1 lane4_3600STDY6184474_AGCCGTGA_L004_17480_1 
#>                                      "0213"                                      "0211" 
#> lane4_3600STDY6184475_AAGCCTTC_L004_17480_1 lane4_3600STDY6184476_AGGTATCC_L004_17480_1 
#>                                      "0213"                                      "0341" 
#> lane4_3600STDY6184477_AGGATCTC_L004_17480_1 lane4_3600STDY6184478_CTGTTTGA_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184479_GGAATTTC_L004_17480_1 lane4_3600STDY6184480_TTGGAGCA_L004_17480_1 
#>                                      "0341"                                      "0213" 
#> lane4_3600STDY6184481_AAGGTCTG_L004_17480_1 lane4_3600STDY6184482_AATTAGGC_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184483_AATCGGGT_L004_17480_1 lane4_3600STDY6184484_AGGTAGAC_L004_17480_1 
#>                                      "0212"                                      "0212" 
#> lane4_3600STDY6184485_CTTATTCC_L004_17480_1 lane4_3600STDY6184486_CAGGCTCT_L004_17480_1 
#>                                      "0341"                                      "0222" 
#> lane4_3600STDY6184487_AAAGCACG_L004_17480_1 lane4_3600STDY6184488_GTATACAC_L004_17480_1 
#>                                      "0222"                                      "0211" 
#> lane4_3600STDY6184489_GGACATAT_L004_17480_1 lane4_3600STDY6184490_CGGTTGGG_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184491_GTCCGTGA_L004_17480_1 lane4_3600STDY6184492_GCCGAACC_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184493_ACTTTACT_L004_17480_1 lane4_3600STDY6184494_GGGTCCAT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184495_ATAACTAG_L004_17480_1 lane4_3600STDY6184496_AATAGAGA_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184497_TCACCATT_L004_17480_1 lane4_3600STDY6184498_CGCCTGAT_L004_17480_1 
#>                                      "0341"                                      "0222" 
#> lane4_3600STDY6184499_GCGTGAAC_L004_17480_1 lane4_3600STDY6184500_TAAGGGTG_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184501_GGTGTCGA_L004_17480_1 lane4_3600STDY6184502_CCGTTAGG_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184503_TGGCAAAA_L004_17480_1 lane4_3600STDY6184504_CCTACCCG_L004_17480_1 
#>                                      "0213"                                      "0222" 
#> lane4_3600STDY6184505_AACAGCGC_L004_17480_1 lane4_3600STDY6184506_TATACATC_L004_17480_1 
#>                                      "0213"                                      "0341" 
#> lane4_3600STDY6184507_AAGCGACT_L004_17480_1 lane4_3600STDY6184508_GAAGCGCA_L004_17480_1 
#>                                      "0211"                                      "0222" 
#> lane4_3600STDY6184509_ACCTCTAC_L004_17480_1 lane4_3600STDY6184510_GATTGCGT_L004_17480_1 
#>                                      "0222"                                       "023" 
#> lane4_3600STDY6184511_GCTGGTTG_L004_17480_1 lane4_3600STDY6184512_ATCGTCCT_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184513_GGACACGG_L004_17480_1 lane4_3600STDY6184514_CGCACCTA_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184515_CTTCGGCT_L004_17480_1 lane4_3600STDY6184516_CGAATCGA_L004_17480_1 
#>                                      "0212"                                       "032" 
#> lane4_3600STDY6184517_TAACAACT_L004_17480_1 lane4_3600STDY6184518_AGCTCTTT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184519_TAATCCCT_L004_17480_1 lane4_3600STDY6184520_AGGACACT_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184521_TTACACTA_L004_17480_1 lane4_3600STDY6184522_AAACATCA_L004_17480_1 
#>                                      "0341"                                      "0213" 
#> lane4_3600STDY6184523_CCATAGCT_L004_17480_1 lane4_3600STDY6184524_GTTATGGC_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184525_ATCCCCTA_L004_17480_1 lane4_3600STDY6184526_CATACTAC_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184527_CAATTGTT_L004_17480_1 lane4_3600STDY6184528_AAACCCGT_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184529_CAGATTTC_L004_17480_1 lane4_3600STDY6184530_GCGTAGGT_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184531_GGCATTCG_L004_17480_1 lane4_3600STDY6184532_TGGGGCTT_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184533_CTGACTAC_L004_17480_1 lane4_3600STDY6184534_AACTTTTA_L004_17480_1 
#>                                      "0212"                                      "0211" 
#> lane4_3600STDY6184535_AGGGATTC_L004_17480_1 lane4_3600STDY6184536_CCGAGTAG_L004_17480_1 
#>                                      "0221"                                      "0212" 
#> lane4_3600STDY6184537_GGGGACTA_L004_17480_1 lane4_3600STDY6184538_GGAGTTGA_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184539_AGCTCATC_L004_17480_1 lane4_3600STDY6184540_TAATCAAC_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184541_ACTGGTCG_L004_17480_1 lane4_3600STDY6184542_GACGATTG_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184543_AGCGATGA_L004_17480_1 lane4_3600STDY6184544_GAAGAGAT_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184545_CGTATGCA_L004_17480_1 lane4_3600STDY6184546_CACGTGCG_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184547_GCTTAAAC_L004_17480_1 lane4_3600STDY6184548_GTTCCGCA_L004_17480_1 
#>                                       "032"                                      "0221" 
#> lane4_3600STDY6184549_GTATCGTC_L004_17480_1 lane4_3600STDY6184550_GTCCTCAC_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184551_GTACGGAC_L004_17480_1 lane4_3600STDY6184552_CATTTTGC_L004_17480_1 
#>                                      "0221"                                      "0221" 
#> lane4_3600STDY6184553_TCCTCTCT_L004_17480_1 lane4_3600STDY6184554_AGCAACGA_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184555_ACAGAAGA_L004_17480_1 lane4_3600STDY6184556_CGACCCTT_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184557_CTGCCTAG_L004_17480_1 lane4_3600STDY6184558_GAGCGCAT_L004_17480_1 
#>                                      "0212"                                      "0222" 
#> lane4_3600STDY6184559_AACTTATC_L004_17480_1 lane4_3600STDY6184560_CCGATGTA_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184561_TTACTACC_L004_17480_1 lane4_3600STDY6184562_CAAGGAGC_L004_17480_1 
#>                                      "0341"                                      "0221" 
#> lane4_3600STDY6184563_TGGTTGAC_L004_17480_1 lane4_3600STDY6184564_ACCTGCTG_L004_17480_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6183797_ATCACGTT_L001_17592_1 lane1_3600STDY6183798_CGATGTTT_L001_17592_1 
#>                                      "0221"                                       "031" 
#> lane1_3600STDY6183799_TTAGGCAT_L001_17592_1 lane1_3600STDY6183800_TGACCACT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183801_ACAGTGGT_L001_17592_1 lane1_3600STDY6183802_GCCAATGT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183803_CAGATCTG_L001_17592_1 lane1_3600STDY6183804_ACTTGATG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183805_GATCAGCG_L001_17592_1 lane1_3600STDY6183806_TAGCTTGT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183807_GGCTACAG_L001_17592_1 lane1_3600STDY6183808_CTTGTACT_L001_17592_1 
#>                                       "031"                                      "0223" 
#> lane1_3600STDY6183809_TGGTTGTT_L001_17592_1 lane1_3600STDY6183810_TCTCGGTT_L001_17592_1 
#>                                       "031"                                      "0221" 
#> lane1_3600STDY6183811_TAAGCGTT_L001_17592_1 lane1_3600STDY6183812_TCCGTCTT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183813_TGTACCTT_L001_17592_1 lane1_3600STDY6183814_TTCTGTGT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183815_TCTGCTGT_L001_17592_1 lane1_3600STDY6183816_TTGGAGGT_L001_17592_1 
#>                                       "033"                                      "0221" 
#> lane1_3600STDY6183817_TCGAGCGT_L001_17592_1 lane1_3600STDY6183818_TGATACGT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183819_TGCATAGT_L001_17592_1 lane1_3600STDY6183820_TTGACTCT_L001_17592_1 
#>                                       "031"                                      "0221" 
#> lane1_3600STDY6183821_TGCGATCT_L001_17592_1 lane1_3600STDY6183822_TTCCTGCT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183823_TAGTGACT_L001_17592_1 lane1_3600STDY6183824_TACAGGAT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183825_TCCTCAAT_L001_17592_1 lane1_3600STDY6183826_TGTGGTTG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183827_TAGTCTTG_L001_17592_1 lane1_3600STDY6183828_TTCCATTG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183829_TCGAAGTG_L001_17592_1 lane1_3600STDY6183830_TAACGCTG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183831_TTGGTATG_L001_17592_1 lane1_3600STDY6183832_TGAACTGG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183833_TACTTCGG_L001_17592_1 lane1_3600STDY6183834_TCTCACGG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183835_TCAGGAGG_L001_17592_1 lane1_3600STDY6183836_TAAGTTCG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183837_TCCAGTCG_L001_17592_1 lane1_3600STDY6183838_TGTATGCG_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183839_TCATTGAG_L001_17592_1 lane1_3600STDY6183840_TGGCTCAG_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6183841_TATGCCAG_L001_17592_1 lane1_3600STDY6183842_TCAGATTC_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6183843_TACTAGTC_L001_17592_1 lane1_3600STDY6183844_TTCAGCTC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183845_TGTCTATC_L001_17592_1 lane1_3600STDY6183846_TATGTGGC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183847_TTACTCGC_L001_17592_1 lane1_3600STDY6183848_TCGTTAGC_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183849_TACCGAGC_L001_17592_1 lane1_3600STDY6183850_TGTTCTCC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183851_TTCGCACC_L001_17592_1 lane1_3600STDY6183852_TTGCGTAC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183853_TCTACGAC_L001_17592_1 lane1_3600STDY6183854_TGACAGAC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183855_TAGAACAC_L001_17592_1 lane1_3600STDY6183856_TCATCCTA_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183857_TGCTGATA_L001_17592_1 lane1_3600STDY6183858_TAGACGGA_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6183859_TGTGAAGA_L001_17592_1 lane1_3600STDY6183860_TCTCTTCA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183861_TTGTTCCA_L001_17592_1 lane1_3600STDY6183862_TGAAGCCA_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183863_TACCACCA_L001_17592_1 lane1_3600STDY6183864_TGCGTGAA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6183865_GGTGAGTT_L001_17592_1 lane1_3600STDY6183866_GATCTCTT_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6183867_GTGTCCTT_L001_17592_1 lane1_3600STDY6183868_GACGGATT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183869_GCAACATT_L001_17592_1 lane1_3600STDY6183870_GGTCGTGT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183871_GAATCTGT_L001_17592_1 lane1_3600STDY6183872_GTACATCT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183873_GAGGTGCT_L001_17592_1 lane1_3600STDY6183874_GCATGGCT_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6183875_GTTAGCCT_L001_17592_1 lane1_3600STDY6183876_GTCGCTAT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183877_GGAATGAT_L001_17592_1 lane1_3600STDY6183878_GAGCCAAT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183879_GCTCCTTG_L001_17592_1 lane1_3600STDY6183880_GTAAGGTG_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183881_GAGGATGG_L001_17592_1 lane1_3600STDY6183882_GTTGTCGG_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183883_GGATTAGG_L001_17592_1 lane1_3600STDY6183884_GATAGAGG_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6183885_GTGTGTCG_L001_17592_1 lane1_3600STDY6183886_GCAATCCG_L001_17592_1 
#>                                       "023"                                      "0222" 
#> lane1_3600STDY6183887_GACCTTAG_L001_17592_1 lane1_3600STDY6183888_GCCTGTTC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183889_GCACTGTC_L001_17592_1 lane1_3600STDY6183890_GCTAACTC_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6183891_GATTCATC_L001_17592_1 lane1_3600STDY6183892_GTCTTGGC_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6183893_GTAGAAGC_L001_17592_1 lane1_3600STDY6183894_GATGGTCC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183895_GTGCTACC_L001_17592_1 lane1_3600STDY6183896_GCGATTAC_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183897_GGTTGGAC_L001_17592_1 lane1_3600STDY6183898_GGCACAAC_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6183899_GACACTTA_L001_17592_1 lane1_3600STDY6183900_GTGCAGTA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183901_GGAGTCTA_L001_17592_1 lane1_3600STDY6183902_GCTATGGA_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183903_GAGTGCGA_L001_17592_1 lane1_3600STDY6183904_GTAACCGA_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183905_GGCAAGCA_L001_17592_1 lane1_3600STDY6183906_GCCTTACA_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6183907_GAACGACA_L001_17592_1 lane1_3600STDY6183908_GCAGGTAA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6183909_GCGTCGAA_L001_17592_1 lane1_3600STDY6183910_CGTTCGGT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183911_CACCAGGT_L001_17592_1 lane1_3600STDY6183912_CTGCGAGT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183913_CCGTATCT_L001_17592_1 lane1_3600STDY6183914_CGCTTCCT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183915_CAAGACCT_L001_17592_1 lane1_3600STDY6183916_CACACACT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183917_CCTAGTAT_L001_17592_1 lane1_3600STDY6183918_CCACCGAT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183919_CTTCACAT_L001_17592_1 lane1_3600STDY6183920_CTATCATG_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183921_CATGAATG_L001_17592_1 lane1_3600STDY6183922_CCACTTGG_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183923_CTGTACGG_L001_17592_1 lane1_3600STDY6183924_CTAGATAG_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183925_CACTCGAG_L001_17592_1 lane1_3600STDY6183926_CCGACAAG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183927_CTTGCTTC_L001_17592_1 lane1_3600STDY6183928_CATAGGTC_L001_17592_1 
#>                                       "023"                                      "0212" 
#> lane1_3600STDY6183929_CACATTGC_L001_17592_1 lane1_3600STDY6183930_CGCTAAGC_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6183931_CAACCTCC_L001_17592_1 lane1_3600STDY6183932_CAGCTGAC_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6183933_CTCAAGAC_L001_17592_1 lane1_3600STDY6183934_CGTGTCAC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183935_CCATGCAC_L001_17592_1 lane1_3600STDY6183936_CGTTACTA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183937_CAAGTAGA_L001_17592_1 lane1_3600STDY6183938_CTCTCTCA_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183939_CGACTGCA_L001_17592_1 lane1_3600STDY6183940_CCTGAGCA_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183941_CAGGCTAA_L001_17592_1 lane1_3600STDY6183942_CGGAGGAA_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183943_AGGAGATT_L001_17592_1 lane1_3600STDY6183944_AGGCAGCT_L001_17592_1 
#>                                       "031"                                      "0213" 
#> lane1_3600STDY6183945_ACGTTCAT_L001_17592_1 lane1_3600STDY6183946_AACGTGTG_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183947_AGACCGTG_L001_17592_1 lane1_3600STDY6183948_ACCTCTGG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183949_ATCCTAGG_L001_17592_1 lane1_3600STDY6183950_ATCAACCG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183951_AGGTCACG_L001_17592_1 lane1_3600STDY6183952_ACTGTTAG_L001_17592_1 
#>                                       "031"                                      "0221" 
#> lane1_3600STDY6183953_AAGAGTAG_L001_17592_1 lane1_3600STDY6183954_ATTCGGAG_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6183955_ACGCAATC_L001_17592_1 lane1_3600STDY6183956_ACAAGTGC_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6183957_ATGGATCC_L001_17592_1 lane1_3600STDY6183958_AGAGGACC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183959_ATCTCCAC_L001_17592_1 lane1_3600STDY6183960_ATTGGCTA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183961_AATCCTGA_L001_17592_1 lane1_3600STDY6183962_AGGATTCA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183963_AACTGGCA_L001_17592_1 lane1_3600STDY6183964_ACAACGCA_L001_17592_1 
#>                                       "033"                                      "0223" 
#> lane1_3600STDY6183965_CGGAAACA_L001_17592_1 lane1_3600STDY6183966_AATGAATT_L001_17592_1 
#>                                      "0222"                                       "033" 
#> lane1_3600STDY6183967_TAGGACCC_L001_17592_1 lane1_3600STDY6183968_TCTCAGTG_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183969_CATGGGAA_L001_17592_1 lane1_3600STDY6183970_CCTAAGAT_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6183971_CTCAGATA_L001_17592_1 lane1_3600STDY6183972_CCCATAGG_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183973_GCTATGAC_L001_17592_1 lane1_3600STDY6183974_GCTGTGAA_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183975_ACCTTCAA_L001_17592_1 lane1_3600STDY6183976_ACAAAGCC_L001_17592_1 
#>                                       "023"                                      "0211" 
#> lane1_3600STDY6183977_CAAAACCG_L001_17592_1 lane1_3600STDY6183978_GCTGGACA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183979_AAGTCGTA_L001_17592_1 lane1_3600STDY6183980_CATCCGTA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183981_TTGTGTCT_L001_17592_1 lane1_3600STDY6183982_TGCTCTAG_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183983_ACCCAACA_L001_17592_1 lane1_3600STDY6183984_CGATCTGA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183985_GTTCCACG_L001_17592_1 lane1_3600STDY6183986_ACTCTTTC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183987_TATTGGAG_L001_17592_1 lane1_3600STDY6183988_TAAACATA_L001_17592_1 
#>                                       "023"                                      "0221" 
#> lane1_3600STDY6183989_GTAAGATA_L001_17592_1 lane1_3600STDY6183990_TACCGCAA_L001_17592_1 
#>                                      "0221"                                       "031" 
#> lane1_3600STDY6183991_TATCTCCT_L001_17592_1 lane1_3600STDY6183992_TGTCATCT_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6183993_ATAGCTCT_L001_17592_1 lane1_3600STDY6183994_AGTCCAAC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183995_TTTGGGCA_L001_17592_1 lane1_3600STDY6183996_TCTGACGC_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6183997_TGTCGACT_L001_17592_1 lane1_3600STDY6183998_GTCACGTA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183999_TTGAGCGA_L001_17592_1 lane1_3600STDY6184000_GAGACATA_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6184001_GTCAAGCT_L001_17592_1 lane1_3600STDY6184002_AGCAAGTT_L001_17592_1 
#>                                      "0221"                                       "031" 
#> lane1_3600STDY6184003_GACGCTCA_L001_17592_1 lane1_3600STDY6184004_ACGGCAGC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184005_AGAACTGA_L001_17592_1 lane1_3600STDY6184006_CGCCTTTG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184007_TAAGGTCA_L001_17592_1 lane1_3600STDY6184008_ACGTTGGC_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184009_CCAGCTTA_L001_17592_1 lane1_3600STDY6184010_GAATCCTA_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184011_ACTTCGTA_L001_17592_1 lane1_3600STDY6184012_TAGTCGGT_L001_17592_1 
#>                                      "0223"                                       "031" 
#> lane1_3600STDY6184013_CGCACGAG_L001_17592_1 lane1_3600STDY6184014_ACGTACTA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184015_AGCGCCAA_L001_17592_1 lane1_3600STDY6184016_GCCTGCCC_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6184017_AGGACGAT_L001_17592_1 lane1_3600STDY6184018_CTTGACCG_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6184019_AGGTCTAA_L001_17592_1 lane1_3600STDY6184020_CGAGATCC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184021_ATTAGCGG_L001_17592_1 lane1_3600STDY6184022_GCGCTGAT_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6184023_TGCTGAAC_L001_17592_1 lane1_3600STDY6184024_GAGGGCAG_L001_17592_1 
#>                                      "0221"                                       "031" 
#> lane1_3600STDY6184025_GTTTTCAC_L001_17592_1 lane1_3600STDY6184026_GAGATGCC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184027_TTGAGAAG_L001_17592_1 lane1_3600STDY6184028_GCATCCGG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184029_GTCACCAG_L001_17592_1 lane1_3600STDY6184030_GAGGTCGC_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184031_AAGGGGTA_L001_17592_1 lane1_3600STDY6184032_TTTTACGT_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184033_TTCCTACA_L001_17592_1 lane1_3600STDY6184034_AGTGTAGT_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6184035_GTGGCCAA_L001_17592_1 lane1_3600STDY6184036_AAATACTC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184037_CACCCGTC_L001_17592_1 lane1_3600STDY6184038_TCGTGGTT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184039_ACTTGGGG_L001_17592_1 lane1_3600STDY6184040_GGCTGCTT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184041_CAGGGTCG_L001_17592_1 lane1_3600STDY6184042_CTCGTCGA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184043_TCTACAGT_L001_17592_1 lane1_3600STDY6184044_CTTCTAGA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184045_AACGGCTT_L001_17592_1 lane1_3600STDY6184046_ATAAGACT_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6184047_GTTTTTCG_L001_17592_1 lane1_3600STDY6184048_ATTGGTAT_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6184049_CGCCAGTA_L001_17592_1 lane1_3600STDY6184050_AAGCCGAA_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184051_TGACCCAC_L001_17592_1 lane1_3600STDY6184052_ATTGCACA_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6184053_CTTTTGAT_L001_17592_1 lane1_3600STDY6184054_TAGCGAGA_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184055_TTCGCAGG_L001_17592_1 lane1_3600STDY6184056_TAGTTATT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184057_TCCTCCGA_L001_17592_1 lane1_3600STDY6184058_GCGGGTCT_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6184059_GATTCTAT_L001_17592_1 lane1_3600STDY6184060_ATGCAAAG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184061_GTCTGAGG_L001_17592_1 lane1_3600STDY6184062_TCTGGCGA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184063_AATTTGCG_L001_17592_1 lane1_3600STDY6184064_TGGGTTGG_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184065_AGTTGAAA_L001_17592_1 lane1_3600STDY6184066_GACCGGAA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184067_GATCGAAC_L001_17592_1 lane1_3600STDY6184068_GTATAGGG_L001_17592_1 
#>                                      "0222"                                      "0222" 
#> lane1_3600STDY6184069_GGTAAGAG_L001_17592_1 lane1_3600STDY6184070_AGTCCGAT_L001_17592_1 
#>                                      "0342"                                       "023" 
#> lane1_3600STDY6184071_ATACAGGC_L001_17592_1 lane1_3600STDY6184072_TGAGACTC_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6184073_ACTCAGGA_L001_17592_1 lane1_3600STDY6184074_GTGTCTGA_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184075_CTTGAATC_L001_17592_1 lane1_3600STDY6184076_CCGCATGA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184077_AAGTAACA_L001_17592_1 lane1_3600STDY6184078_GTGGTACT_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184079_AGCTGTGC_L001_17592_1 lane1_3600STDY6184080_TTACCTTC_L001_17592_1 
#>                                      "0222"                                       "033" 
#> lane1_3600STDY6184081_TCCGGGTA_L001_17592_1 lane1_3600STDY6184082_CTACGTAA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184083_TCGGACCG_L001_17592_1 lane1_3600STDY6184084_ATGCGTCG_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184085_TTCTTAGC_L001_17592_1 lane1_3600STDY6184086_TGAGTAAG_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184087_AAGTGATA_L001_17592_1 lane1_3600STDY6184088_TCGATGCG_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184089_TATTCTGG_L001_17592_1 lane1_3600STDY6184090_AGCCGTGA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184091_AAGCCTTC_L001_17592_1 lane1_3600STDY6184092_AGGTATCC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184093_AGGATCTC_L001_17592_1 lane1_3600STDY6184094_CTGTTTGA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184095_GGAATTTC_L001_17592_1 lane1_3600STDY6184096_TTGGAGCA_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6184097_AAGGTCTG_L001_17592_1 lane1_3600STDY6184098_AATTAGGC_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184099_AATCGGGT_L001_17592_1 lane1_3600STDY6184100_AGGTAGAC_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184101_CTTATTCC_L001_17592_1 lane1_3600STDY6184102_CAGGCTCT_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184103_AAAGCACG_L001_17592_1 lane1_3600STDY6184104_GTATACAC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184105_GGACATAT_L001_17592_1 lane1_3600STDY6184106_CGGTTGGG_L001_17592_1 
#>                                      "0222"                                       "023" 
#> lane1_3600STDY6184107_GTCCGTGA_L001_17592_1 lane1_3600STDY6184108_GCCGAACC_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184109_ACTTTACT_L001_17592_1 lane1_3600STDY6184110_GGGTCCAT_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184111_ATAACTAG_L001_17592_1 lane1_3600STDY6184112_AATAGAGA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184113_TCACCATT_L001_17592_1 lane1_3600STDY6184114_CGCCTGAT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184115_GCGTGAAC_L001_17592_1 lane1_3600STDY6184116_TAAGGGTG_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184117_GGTGTCGA_L001_17592_1 lane1_3600STDY6184118_CCGTTAGG_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184119_TGGCAAAA_L001_17592_1 lane1_3600STDY6184120_CCTACCCG_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6184121_AACAGCGC_L001_17592_1 lane1_3600STDY6184122_TATACATC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184123_AAGCGACT_L001_17592_1 lane1_3600STDY6184124_GAAGCGCA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184125_ACCTCTAC_L001_17592_1 lane1_3600STDY6184126_GATTGCGT_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184127_GCTGGTTG_L001_17592_1 lane1_3600STDY6184128_ATCGTCCT_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184129_GGACACGG_L001_17592_1 lane1_3600STDY6184130_CGCACCTA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184131_CTTCGGCT_L001_17592_1 lane1_3600STDY6184132_CGAATCGA_L001_17592_1 
#>                                       "031"                                      "0222" 
#> lane1_3600STDY6184133_TAACAACT_L001_17592_1 lane1_3600STDY6184134_AGCTCTTT_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184135_TAATCCCT_L001_17592_1 lane1_3600STDY6184136_AGGACACT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184137_TTACACTA_L001_17592_1 lane1_3600STDY6184138_AAACATCA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184139_CCATAGCT_L001_17592_1 lane1_3600STDY6184140_GTTATGGC_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184141_ATCCCCTA_L001_17592_1 lane1_3600STDY6184142_CATACTAC_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6184143_CAATTGTT_L001_17592_1 lane1_3600STDY6184144_AAACCCGT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184145_CAGATTTC_L001_17592_1 lane1_3600STDY6184146_GCGTAGGT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184147_GGCATTCG_L001_17592_1 lane1_3600STDY6184148_TGGGGCTT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184149_CTGACTAC_L001_17592_1 lane1_3600STDY6184150_AACTTTTA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184151_AGGGATTC_L001_17592_1 lane1_3600STDY6184152_CCGAGTAG_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6184153_GGGGACTA_L001_17592_1 lane1_3600STDY6184154_GGAGTTGA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184155_AGCTCATC_L001_17592_1 lane1_3600STDY6184156_TAATCAAC_L001_17592_1 
#>                                       "031"                                      "0221" 
#> lane1_3600STDY6184157_ACTGGTCG_L001_17592_1 lane1_3600STDY6184158_GACGATTG_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6184159_AGCGATGA_L001_17592_1 lane1_3600STDY6184160_GAAGAGAT_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184161_CGTATGCA_L001_17592_1 lane1_3600STDY6184162_CACGTGCG_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184163_GCTTAAAC_L001_17592_1 lane1_3600STDY6184164_GTTCCGCA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184165_GTATCGTC_L001_17592_1 lane1_3600STDY6184166_GTCCTCAC_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184167_GTACGGAC_L001_17592_1 lane1_3600STDY6184168_CATTTTGC_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6184169_TCCTCTCT_L001_17592_1 lane1_3600STDY6184170_AGCAACGA_L001_17592_1 
#>                                      "0341"                                       "023" 
#> lane1_3600STDY6184171_ACAGAAGA_L001_17592_1 lane1_3600STDY6184172_CGACCCTT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184173_CTGCCTAG_L001_17592_1 lane1_3600STDY6184174_GAGCGCAT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184175_AACTTATC_L001_17592_1 lane1_3600STDY6184176_CCGATGTA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184177_TTACTACC_L001_17592_1 lane1_3600STDY6184178_CAAGGAGC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184179_TGGTTGAC_L001_17592_1 lane1_3600STDY6184180_ACCTGCTG_L001_17592_1 
#>                                       "031"                                      "0221"

show/hide code output

get_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 2688))
#> lane1_3600STDY6077864_ATCACGTT_L001_15986_1 lane1_3600STDY6077865_CGATGTTT_L001_15986_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6077866_TTAGGCAT_L001_15986_1 lane1_3600STDY6077867_TGACCACT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077868_ACAGTGGT_L001_15986_1 lane1_3600STDY6077869_GCCAATGT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077870_CAGATCTG_L001_15986_1 lane1_3600STDY6077871_ACTTGATG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077872_GATCAGCG_L001_15986_1 lane1_3600STDY6077873_TAGCTTGT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077874_GGCTACAG_L001_15986_1 lane1_3600STDY6077875_CTTGTACT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077876_TGGTTGTT_L001_15986_1 lane1_3600STDY6077877_TCTCGGTT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077878_TAAGCGTT_L001_15986_1 lane1_3600STDY6077879_TCCGTCTT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077880_TGTACCTT_L001_15986_1 lane1_3600STDY6077881_TTCTGTGT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077882_TCTGCTGT_L001_15986_1 lane1_3600STDY6077883_TTGGAGGT_L001_15986_1 
#>                                      "0121"                                      "0221" 
#> lane1_3600STDY6077884_TCGAGCGT_L001_15986_1 lane1_3600STDY6077885_TGATACGT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077886_TGCATAGT_L001_15986_1 lane1_3600STDY6077887_TTGACTCT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077888_TGCGATCT_L001_15986_1 lane1_3600STDY6077889_TTCCTGCT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077890_TAGTGACT_L001_15986_1 lane1_3600STDY6077891_TACAGGAT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077892_TCCTCAAT_L001_15986_1 lane1_3600STDY6077893_TGTGGTTG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077894_TAGTCTTG_L001_15986_1 lane1_3600STDY6077895_TTCCATTG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077896_TCGAAGTG_L001_15986_1 lane1_3600STDY6077897_TAACGCTG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077898_TTGGTATG_L001_15986_1 lane1_3600STDY6077899_TGAACTGG_L001_15986_1 
#>                                      "0121"                                      "0221" 
#> lane1_3600STDY6077900_TACTTCGG_L001_15986_1 lane1_3600STDY6077901_TCTCACGG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077902_TCAGGAGG_L001_15986_1 lane1_3600STDY6077903_TAAGTTCG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077904_TCCAGTCG_L001_15986_1 lane1_3600STDY6077905_TGTATGCG_L001_15986_1 
#>                                      "0221"                                      "0121" 
#> lane1_3600STDY6077906_TCATTGAG_L001_15986_1 lane1_3600STDY6077907_TGGCTCAG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077908_TATGCCAG_L001_15986_1 lane1_3600STDY6077909_TCAGATTC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077910_TACTAGTC_L001_15986_1 lane1_3600STDY6077911_TTCAGCTC_L001_15986_1 
#>                                      "0121"                                      "0221" 
#> lane1_3600STDY6077912_TGTCTATC_L001_15986_1 lane1_3600STDY6077913_TATGTGGC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077914_TTACTCGC_L001_15986_1 lane1_3600STDY6077915_TCGTTAGC_L001_15986_1 
#>                                      "0221"                                      "0121" 
#> lane1_3600STDY6077916_TACCGAGC_L001_15986_1 lane1_3600STDY6077917_TGTTCTCC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077918_TTCGCACC_L001_15986_1 lane1_3600STDY6077919_TTGCGTAC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077920_TCTACGAC_L001_15986_1 lane1_3600STDY6077921_TGACAGAC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077922_TAGAACAC_L001_15986_1 lane1_3600STDY6077923_TCATCCTA_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077924_TGCTGATA_L001_15986_1 lane1_3600STDY6077925_TAGACGGA_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077926_TGTGAAGA_L001_15986_1 lane1_3600STDY6077927_TCTCTTCA_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077928_TTGTTCCA_L001_15986_1 lane1_3600STDY6077929_TGAAGCCA_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077930_TACCACCA_L001_15986_1 lane1_3600STDY6077931_TGCGTGAA_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077932_GGTGAGTT_L001_15986_1 lane1_3600STDY6077933_GATCTCTT_L001_15986_1 
#>                                      "0121"                                      "0221" 
#> lane1_3600STDY6077934_GTGTCCTT_L001_15986_1 lane1_3600STDY6077935_GACGGATT_L001_15986_1 
#>                                      "0221"                                      "0121" 
#> lane1_3600STDY6077936_GCAACATT_L001_15986_1 lane1_3600STDY6077937_GGTCGTGT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077938_GAATCTGT_L001_15986_1 lane1_3600STDY6077939_GTACATCT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077940_GAGGTGCT_L001_15986_1 lane1_3600STDY6077941_GCATGGCT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077942_GTTAGCCT_L001_15986_1 lane1_3600STDY6077943_GTCGCTAT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077944_GGAATGAT_L001_15986_1 lane1_3600STDY6077945_GAGCCAAT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077946_GCTCCTTG_L001_15986_1 lane1_3600STDY6077947_GTAAGGTG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077948_GAGGATGG_L001_15986_1 lane1_3600STDY6077949_GTTGTCGG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077950_GGATTAGG_L001_15986_1 lane1_3600STDY6077951_GATAGAGG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077952_GTGTGTCG_L001_15986_1 lane1_3600STDY6077953_GCAATCCG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077954_GACCTTAG_L001_15986_1 lane1_3600STDY6077955_GCCTGTTC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077956_GCACTGTC_L001_15986_1 lane1_3600STDY6077957_GCTAACTC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077958_GATTCATC_L001_15986_1 lane1_3600STDY6077959_GTCTTGGC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane3_3600STDY6077960_ATCACGTT_L003_15987_1 lane3_3600STDY6077961_CGATGTTT_L003_15987_1 
#>                                      "0221"                                      "0221" 
#> lane3_3600STDY6077962_TTAGGCAT_L003_15987_1 lane3_3600STDY6077963_TGACCACT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077964_ACAGTGGT_L003_15987_1 lane3_3600STDY6077965_GCCAATGT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077966_CAGATCTG_L003_15987_1 lane3_3600STDY6077967_ACTTGATG_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077968_GATCAGCG_L003_15987_1 lane3_3600STDY6077969_TAGCTTGT_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6077970_GGCTACAG_L003_15987_1 lane3_3600STDY6077971_CTTGTACT_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6077972_TGGTTGTT_L003_15987_1 lane3_3600STDY6077973_TCTCGGTT_L003_15987_1 
#>                                      "0123"                                      "0122" 
#> lane3_3600STDY6077974_TAAGCGTT_L003_15987_1 lane3_3600STDY6077975_TCCGTCTT_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6077976_TGTACCTT_L003_15987_1 lane3_3600STDY6077977_TTCTGTGT_L003_15987_1 
#>                                      "0123"                                      "0122" 
#> lane3_3600STDY6077978_TCTGCTGT_L003_15987_1 lane3_3600STDY6077979_TTGGAGGT_L003_15987_1 
#>                                      "0224"                                      "0122" 
#> lane3_3600STDY6077980_TCGAGCGT_L003_15987_1 lane3_3600STDY6077981_TGATACGT_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6077982_TGCATAGT_L003_15987_1 lane3_3600STDY6077983_TTGACTCT_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6077984_TGCGATCT_L003_15987_1 lane3_3600STDY6077985_TTCCTGCT_L003_15987_1 
#>                                      "0123"                                      "0122" 
#> lane3_3600STDY6077986_TAGTGACT_L003_15987_1 lane3_3600STDY6077987_TACAGGAT_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6077988_TCCTCAAT_L003_15987_1 lane3_3600STDY6077989_TGTGGTTG_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077990_TAGTCTTG_L003_15987_1 lane3_3600STDY6077991_TTCCATTG_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6077992_TCGAAGTG_L003_15987_1 lane3_3600STDY6077993_TAACGCTG_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6077994_TTGGTATG_L003_15987_1 lane3_3600STDY6077995_TGAACTGG_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6077996_TACTTCGG_L003_15987_1 lane3_3600STDY6077997_TCTCACGG_L003_15987_1 
#>                                      "0122"                                      "0224" 
#> lane3_3600STDY6077998_TCAGGAGG_L003_15987_1 lane3_3600STDY6077999_TAAGTTCG_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078000_TCCAGTCG_L003_15987_1 lane3_3600STDY6078001_TGTATGCG_L003_15987_1 
#>                                      "0122"                                      "0221" 
#> lane3_3600STDY6078002_TCATTGAG_L003_15987_1 lane3_3600STDY6078003_TGGCTCAG_L003_15987_1 
#>                                      "0342"                                      "0122" 
#> lane3_3600STDY6078004_TATGCCAG_L003_15987_1 lane3_3600STDY6078005_TCAGATTC_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6078006_TACTAGTC_L003_15987_1 lane3_3600STDY6078007_TTCAGCTC_L003_15987_1 
#>                                      "0123"                                      "0122" 
#> lane3_3600STDY6078008_TGTCTATC_L003_15987_1 lane3_3600STDY6078009_TATGTGGC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078010_TTACTCGC_L003_15987_1 lane3_3600STDY6078011_TCGTTAGC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078012_TACCGAGC_L003_15987_1 lane3_3600STDY6078013_TGTTCTCC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078014_TTCGCACC_L003_15987_1 lane3_3600STDY6078015_TTGCGTAC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078016_TCTACGAC_L003_15987_1 lane3_3600STDY6078017_TGACAGAC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078018_TAGAACAC_L003_15987_1 lane3_3600STDY6078019_TCATCCTA_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078020_TGCTGATA_L003_15987_1 lane3_3600STDY6078021_TAGACGGA_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078022_TGTGAAGA_L003_15987_1 lane3_3600STDY6078023_TCTCTTCA_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078024_TTGTTCCA_L003_15987_1 lane3_3600STDY6078025_TGAAGCCA_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078026_TACCACCA_L003_15987_1 lane3_3600STDY6078027_TGCGTGAA_L003_15987_1 
#>                                      "0123"                                      "0221" 
#> lane3_3600STDY6078028_GGTGAGTT_L003_15987_1 lane3_3600STDY6078029_GATCTCTT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078030_GTGTCCTT_L003_15987_1 lane3_3600STDY6078031_GACGGATT_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078032_GCAACATT_L003_15987_1 lane3_3600STDY6078033_GGTCGTGT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078034_GAATCTGT_L003_15987_1 lane3_3600STDY6078035_GTACATCT_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6078036_GAGGTGCT_L003_15987_1 lane3_3600STDY6078037_GCATGGCT_L003_15987_1 
#>                                      "0123"                                      "0122" 
#> lane3_3600STDY6078038_GTTAGCCT_L003_15987_1 lane3_3600STDY6078039_GTCGCTAT_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078040_GGAATGAT_L003_15987_1 lane3_3600STDY6078041_GAGCCAAT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078042_GCTCCTTG_L003_15987_1 lane3_3600STDY6078043_GTAAGGTG_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078044_GAGGATGG_L003_15987_1 lane3_3600STDY6078045_GTTGTCGG_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078046_GGATTAGG_L003_15987_1 lane3_3600STDY6078047_GATAGAGG_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078048_GTGTGTCG_L003_15987_1 lane3_3600STDY6078049_GCAATCCG_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078050_GACCTTAG_L003_15987_1 lane3_3600STDY6078051_GCCTGTTC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078052_GCACTGTC_L003_15987_1 lane3_3600STDY6078053_GCTAACTC_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6078054_GATTCATC_L003_15987_1 lane3_3600STDY6078055_GTCTTGGC_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane1_3600STDY6167693_ATCACGTT_L001_17236_1 lane1_3600STDY6167694_CGATGTTT_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167695_TTAGGCAT_L001_17236_1 lane1_3600STDY6167696_TGACCACT_L001_17236_1 
#>                                      "0342"                                       "011" 
#> lane1_3600STDY6167697_ACAGTGGT_L001_17236_1 lane1_3600STDY6167698_GCCAATGT_L001_17236_1 
#>                                      "0224"                                       "011" 
#> lane1_3600STDY6167699_CAGATCTG_L001_17236_1 lane1_3600STDY6167700_ACTTGATG_L001_17236_1 
#>                                       "011"                                      "0221" 
#> lane1_3600STDY6167701_GATCAGCG_L001_17236_1 lane1_3600STDY6167702_TAGCTTGT_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167703_GGCTACAG_L001_17236_1 lane1_3600STDY6167704_CTTGTACT_L001_17236_1 
#>                                       "014"                                      "0342" 
#> lane1_3600STDY6167705_TGGTTGTT_L001_17236_1 lane1_3600STDY6167706_TCTCGGTT_L001_17236_1 
#>                                       "014"                                      "0221" 
#> lane1_3600STDY6167707_TAAGCGTT_L001_17236_1 lane1_3600STDY6167708_TCCGTCTT_L001_17236_1 
#>                                      "0221"                                       "013" 
#> lane1_3600STDY6167709_TGTACCTT_L001_17236_1 lane1_3600STDY6167710_TTCTGTGT_L001_17236_1 
#>                                       "011"                                      "0221" 
#> lane1_3600STDY6167711_TCTGCTGT_L001_17236_1 lane1_3600STDY6167712_TTGGAGGT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167713_TCGAGCGT_L001_17236_1 lane1_3600STDY6167714_TGATACGT_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167715_TGCATAGT_L001_17236_1 lane1_3600STDY6167716_TTGACTCT_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167717_TGCGATCT_L001_17236_1 lane1_3600STDY6167718_TTCCTGCT_L001_17236_1 
#>                                       "013"                                      "0221" 
#> lane1_3600STDY6167719_TAGTGACT_L001_17236_1 lane1_3600STDY6167720_TACAGGAT_L001_17236_1 
#>                                      "0342"                                      "0342" 
#> lane1_3600STDY6167721_TCCTCAAT_L001_17236_1 lane1_3600STDY6167722_TGTGGTTG_L001_17236_1 
#>                                      "0342"                                       "011" 
#> lane1_3600STDY6167723_TAGTCTTG_L001_17236_1 lane1_3600STDY6167724_TTCCATTG_L001_17236_1 
#>                                       "011"                                      "0221" 
#> lane1_3600STDY6167725_TCGAAGTG_L001_17236_1 lane1_3600STDY6167726_TAACGCTG_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167727_TTGGTATG_L001_17236_1 lane1_3600STDY6167728_TGAACTGG_L001_17236_1 
#>                                       "013"                                      "0121" 
#> lane1_3600STDY6167729_TACTTCGG_L001_17236_1 lane1_3600STDY6167730_TCTCACGG_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167731_TCAGGAGG_L001_17236_1 lane1_3600STDY6167732_TAAGTTCG_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167733_TCCAGTCG_L001_17236_1 lane1_3600STDY6167734_TGTATGCG_L001_17236_1 
#>                                       "011"                                      "0221" 
#> lane1_3600STDY6167735_TCATTGAG_L001_17236_1 lane1_3600STDY6167736_TGGCTCAG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167737_TATGCCAG_L001_17236_1 lane1_3600STDY6167738_TCAGATTC_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167739_TACTAGTC_L001_17236_1 lane1_3600STDY6167740_TTCAGCTC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167741_TGTCTATC_L001_17236_1 lane1_3600STDY6167742_TATGTGGC_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167743_TTACTCGC_L001_17236_1 lane1_3600STDY6167744_TCGTTAGC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167745_TACCGAGC_L001_17236_1 lane1_3600STDY6167746_TGTTCTCC_L001_17236_1 
#>                                      "0342"                                       "011" 
#> lane1_3600STDY6167747_TTCGCACC_L001_17236_1 lane1_3600STDY6167748_TTGCGTAC_L001_17236_1 
#>                                      "0342"                                       "011" 
#> lane1_3600STDY6167749_TCTACGAC_L001_17236_1 lane1_3600STDY6167750_TGACAGAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167751_TAGAACAC_L001_17236_1 lane1_3600STDY6167752_TCATCCTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167753_TGCTGATA_L001_17236_1 lane1_3600STDY6167754_TAGACGGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167755_TGTGAAGA_L001_17236_1 lane1_3600STDY6167756_TCTCTTCA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167757_TTGTTCCA_L001_17236_1 lane1_3600STDY6167758_TGAAGCCA_L001_17236_1 
#>                                       "011"                                      "0221" 
#> lane1_3600STDY6167759_TACCACCA_L001_17236_1 lane1_3600STDY6167760_TGCGTGAA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167761_GGTGAGTT_L001_17236_1 lane1_3600STDY6167762_GATCTCTT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167763_GTGTCCTT_L001_17236_1 lane1_3600STDY6167764_GACGGATT_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167765_GCAACATT_L001_17236_1 lane1_3600STDY6167766_GGTCGTGT_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167767_GAATCTGT_L001_17236_1 lane1_3600STDY6167768_GTACATCT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167769_GAGGTGCT_L001_17236_1 lane1_3600STDY6167770_GCATGGCT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167771_GTTAGCCT_L001_17236_1 lane1_3600STDY6167772_GTCGCTAT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167773_GGAATGAT_L001_17236_1 lane1_3600STDY6167774_GAGCCAAT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167775_GCTCCTTG_L001_17236_1 lane1_3600STDY6167776_GTAAGGTG_L001_17236_1 
#>                                       "011"                                      "0221" 
#> lane1_3600STDY6167777_GAGGATGG_L001_17236_1 lane1_3600STDY6167778_GTTGTCGG_L001_17236_1 
#>                                       "011"                                      "0221" 
#> lane1_3600STDY6167779_GGATTAGG_L001_17236_1 lane1_3600STDY6167780_GATAGAGG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167781_GTGTGTCG_L001_17236_1 lane1_3600STDY6167782_GCAATCCG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167783_GACCTTAG_L001_17236_1 lane1_3600STDY6167784_GCCTGTTC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167785_GCACTGTC_L001_17236_1 lane1_3600STDY6167786_GCTAACTC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167787_GATTCATC_L001_17236_1 lane1_3600STDY6167788_GTCTTGGC_L001_17236_1 
#>                                       "011"                                      "0221" 
#> lane1_3600STDY6167789_GTAGAAGC_L001_17236_1 lane1_3600STDY6167790_GATGGTCC_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167791_GTGCTACC_L001_17236_1 lane1_3600STDY6167792_GCGATTAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167793_GGTTGGAC_L001_17236_1 lane1_3600STDY6167794_GGCACAAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167795_GACACTTA_L001_17236_1 lane1_3600STDY6167796_GTGCAGTA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167797_GGAGTCTA_L001_17236_1 lane1_3600STDY6167798_GCTATGGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167799_GAGTGCGA_L001_17236_1 lane1_3600STDY6167800_GTAACCGA_L001_17236_1 
#>                                      "0342"                                       "011" 
#> lane1_3600STDY6167801_GGCAAGCA_L001_17236_1 lane1_3600STDY6167802_GCCTTACA_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167803_GAACGACA_L001_17236_1 lane1_3600STDY6167804_GCAGGTAA_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167805_GCGTCGAA_L001_17236_1 lane1_3600STDY6167806_CGTTCGGT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167807_CACCAGGT_L001_17236_1 lane1_3600STDY6167808_CTGCGAGT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167809_CCGTATCT_L001_17236_1 lane1_3600STDY6167810_CGCTTCCT_L001_17236_1 
#>                                       "011"                                      "0222" 
#> lane1_3600STDY6167811_CAAGACCT_L001_17236_1 lane1_3600STDY6167812_CACACACT_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167813_CCTAGTAT_L001_17236_1 lane1_3600STDY6167814_CCACCGAT_L001_17236_1 
#>                                      "0221"                                       "011" 
#> lane1_3600STDY6167815_CTTCACAT_L001_17236_1 lane1_3600STDY6167816_CTATCATG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167817_CATGAATG_L001_17236_1 lane1_3600STDY6167818_CCACTTGG_L001_17236_1 
#>                                      "0342"                                       "011" 
#> lane1_3600STDY6167819_CTGTACGG_L001_17236_1 lane1_3600STDY6167820_CTAGATAG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167821_CACTCGAG_L001_17236_1 lane1_3600STDY6167822_CCGACAAG_L001_17236_1 
#>                                      "0342"                                       "013" 
#> lane1_3600STDY6167823_CTTGCTTC_L001_17236_1 lane1_3600STDY6167824_CATAGGTC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167825_CACATTGC_L001_17236_1 lane1_3600STDY6167826_CGCTAAGC_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167827_CAACCTCC_L001_17236_1 lane1_3600STDY6167828_CAGCTGAC_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167829_CTCAAGAC_L001_17236_1 lane1_3600STDY6167830_CGTGTCAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167831_CCATGCAC_L001_17236_1 lane1_3600STDY6167832_CGTTACTA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167833_CAAGTAGA_L001_17236_1 lane1_3600STDY6167834_CTCTCTCA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167835_CGACTGCA_L001_17236_1 lane1_3600STDY6167836_CCTGAGCA_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167837_CAGGCTAA_L001_17236_1 lane1_3600STDY6167838_CGGAGGAA_L001_17236_1 
#>                                       "014"                                       "011" 
#> lane1_3600STDY6167839_AGGAGATT_L001_17236_1 lane1_3600STDY6167840_AGGCAGCT_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167841_ACGTTCAT_L001_17236_1 lane1_3600STDY6167842_AACGTGTG_L001_17236_1 
#>                                      "0342"                                       "013" 
#> lane1_3600STDY6167843_AGACCGTG_L001_17236_1 lane1_3600STDY6167844_ACCTCTGG_L001_17236_1 
#>                                      "0342"                                      "0221" 
#> lane1_3600STDY6167845_ATCCTAGG_L001_17236_1 lane1_3600STDY6167846_ATCAACCG_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167847_AGGTCACG_L001_17236_1 lane1_3600STDY6167848_ACTGTTAG_L001_17236_1 
#>                                      "0221"                                       "013" 
#> lane1_3600STDY6167849_AAGAGTAG_L001_17236_1 lane1_3600STDY6167850_ATTCGGAG_L001_17236_1 
#>                                       "013"                                       "014" 
#> lane1_3600STDY6167851_ACGCAATC_L001_17236_1 lane1_3600STDY6167852_ACAAGTGC_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167853_ATGGATCC_L001_17236_1 lane1_3600STDY6167854_AGAGGACC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167855_ATCTCCAC_L001_17236_1 lane1_3600STDY6167856_ATTGGCTA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167857_AATCCTGA_L001_17236_1 lane1_3600STDY6167858_AGGATTCA_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6167859_AACTGGCA_L001_17236_1 lane1_3600STDY6167860_ACAACGCA_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167861_CGGAAACA_L001_17236_1 lane1_3600STDY6167862_AATGAATT_L001_17236_1 
#>                                      "0221"                                       "014" 
#> lane1_3600STDY6167863_TAGGACCC_L001_17236_1 lane1_3600STDY6167864_TCTCAGTG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167865_CATGGGAA_L001_17236_1 lane1_3600STDY6167866_CCTAAGAT_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167867_CTCAGATA_L001_17236_1 lane1_3600STDY6167868_CCCATAGG_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167869_GCTATGAC_L001_17236_1 lane1_3600STDY6167870_GCTGTGAA_L001_17236_1 
#>                                       "011"                                      "0221" 
#> lane1_3600STDY6167871_ACCTTCAA_L001_17236_1 lane1_3600STDY6167872_ACAAAGCC_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6167873_CAAAACCG_L001_17236_1 lane1_3600STDY6167874_GCTGGACA_L001_17236_1 
#>                                      "0221"                                       "014" 
#> lane1_3600STDY6167875_AAGTCGTA_L001_17236_1 lane1_3600STDY6167876_CATCCGTA_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167877_TTGTGTCT_L001_17236_1 lane1_3600STDY6167878_TGCTCTAG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167879_ACCCAACA_L001_17236_1 lane1_3600STDY6167880_CGATCTGA_L001_17236_1 
#>                                      "0221"                                       "011" 
#> lane1_3600STDY6167881_GTTCCACG_L001_17236_1 lane1_3600STDY6167882_ACTCTTTC_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167883_TATTGGAG_L001_17236_1 lane1_3600STDY6167884_TAAACATA_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6167885_GTAAGATA_L001_17236_1 lane1_3600STDY6167886_TACCGCAA_L001_17236_1 
#>                                      "0342"                                       "013" 
#> lane1_3600STDY6167887_TATCTCCT_L001_17236_1 lane1_3600STDY6167888_TGTCATCT_L001_17236_1 
#>                                      "0342"                                       "011" 
#> lane1_3600STDY6167889_ATAGCTCT_L001_17236_1 lane1_3600STDY6167890_AGTCCAAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167891_TTTGGGCA_L001_17236_1 lane1_3600STDY6167892_TCTGACGC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167893_TGTCGACT_L001_17236_1 lane1_3600STDY6167894_GTCACGTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167895_TTGAGCGA_L001_17236_1 lane1_3600STDY6167896_GAGACATA_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167897_GTCAAGCT_L001_17236_1 lane1_3600STDY6167898_AGCAAGTT_L001_17236_1 
#>                                       "023"                                      "0342" 
#> lane1_3600STDY6167899_GACGCTCA_L001_17236_1 lane1_3600STDY6167900_ACGGCAGC_L001_17236_1 
#>                                       "011"                                      "0342" 
#> lane1_3600STDY6167901_AGAACTGA_L001_17236_1 lane1_3600STDY6167902_CGCCTTTG_L001_17236_1 
#>                                      "0342"                                       "011" 
#> lane1_3600STDY6167903_TAAGGTCA_L001_17236_1 lane1_3600STDY6167904_ACGTTGGC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167905_CCAGCTTA_L001_17236_1 lane1_3600STDY6167906_GAATCCTA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167907_ACTTCGTA_L001_17236_1 lane1_3600STDY6167908_TAGTCGGT_L001_17236_1 
#>                                       "013"                                      "0221" 
#> lane1_3600STDY6167909_CGCACGAG_L001_17236_1 lane1_3600STDY6167910_ACGTACTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167911_AGCGCCAA_L001_17236_1 lane1_3600STDY6167912_GCCTGCCC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167913_AGGACGAT_L001_17236_1 lane1_3600STDY6167914_CTTGACCG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167915_AGGTCTAA_L001_17236_1 lane1_3600STDY6167916_CGAGATCC_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167917_ATTAGCGG_L001_17236_1 lane1_3600STDY6167918_GCGCTGAT_L001_17236_1 
#>                                       "011"                                      "0221" 
#> lane1_3600STDY6167919_TGCTGAAC_L001_17236_1 lane1_3600STDY6167920_GAGGGCAG_L001_17236_1 
#>                                       "014"                                      "0221" 
#> lane1_3600STDY6167921_GTTTTCAC_L001_17236_1 lane1_3600STDY6167922_GAGATGCC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167923_TTGAGAAG_L001_17236_1 lane1_3600STDY6167924_GCATCCGG_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167925_GTCACCAG_L001_17236_1 lane1_3600STDY6167926_GAGGTCGC_L001_17236_1 
#>                                       "011"                                      "0342" 
#> lane1_3600STDY6167927_AAGGGGTA_L001_17236_1 lane1_3600STDY6167928_TTTTACGT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167929_TTCCTACA_L001_17236_1 lane1_3600STDY6167930_AGTGTAGT_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167931_GTGGCCAA_L001_17236_1 lane1_3600STDY6167932_AAATACTC_L001_17236_1 
#>                                       "013"                                       "014" 
#> lane1_3600STDY6167933_CACCCGTC_L001_17236_1 lane1_3600STDY6167934_TCGTGGTT_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167935_ACTTGGGG_L001_17236_1 lane1_3600STDY6167936_GGCTGCTT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167937_CAGGGTCG_L001_17236_1 lane1_3600STDY6167938_CTCGTCGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167939_TCTACAGT_L001_17236_1 lane1_3600STDY6167940_CTTCTAGA_L001_17236_1 
#>                                       "011"                                      "0342" 
#> lane1_3600STDY6167941_AACGGCTT_L001_17236_1 lane1_3600STDY6167942_ATAAGACT_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167943_GTTTTTCG_L001_17236_1 lane1_3600STDY6167944_ATTGGTAT_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167945_CGCCAGTA_L001_17236_1 lane1_3600STDY6167946_AAGCCGAA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167947_TGACCCAC_L001_17236_1 lane1_3600STDY6167948_ATTGCACA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167949_CTTTTGAT_L001_17236_1 lane1_3600STDY6167950_TAGCGAGA_L001_17236_1 
#>                                       "011"                                      "0221" 
#> lane1_3600STDY6167951_TTCGCAGG_L001_17236_1 lane1_3600STDY6167952_TAGTTATT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167953_TCCTCCGA_L001_17236_1 lane1_3600STDY6167954_GCGGGTCT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167955_GATTCTAT_L001_17236_1 lane1_3600STDY6167956_ATGCAAAG_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167957_GTCTGAGG_L001_17236_1 lane1_3600STDY6167958_TCTGGCGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167959_AATTTGCG_L001_17236_1 lane1_3600STDY6167960_TGGGTTGG_L001_17236_1 
#>                                       "011"                                      "0342" 
#> lane1_3600STDY6167961_AGTTGAAA_L001_17236_1 lane1_3600STDY6167962_GACCGGAA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167963_GATCGAAC_L001_17236_1 lane1_3600STDY6167964_GTATAGGG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167965_GGTAAGAG_L001_17236_1 lane1_3600STDY6167966_AGTCCGAT_L001_17236_1 
#>                                      "0221"                                       "011" 
#> lane1_3600STDY6167967_ATACAGGC_L001_17236_1 lane1_3600STDY6167968_TGAGACTC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167969_ACTCAGGA_L001_17236_1 lane1_3600STDY6167970_GTGTCTGA_L001_17236_1 
#>                                       "011"                                      "0342" 
#> lane1_3600STDY6167971_CTTGAATC_L001_17236_1 lane1_3600STDY6167972_CCGCATGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167973_AAGTAACA_L001_17236_1 lane1_3600STDY6167974_GTGGTACT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167975_AGCTGTGC_L001_17236_1 lane1_3600STDY6167976_TTACCTTC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167977_TCCGGGTA_L001_17236_1 lane1_3600STDY6167978_CTACGTAA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167979_TCGGACCG_L001_17236_1 lane1_3600STDY6167980_ATGCGTCG_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167981_TTCTTAGC_L001_17236_1 lane1_3600STDY6167982_TGAGTAAG_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167983_AAGTGATA_L001_17236_1 lane1_3600STDY6167984_TCGATGCG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167985_TATTCTGG_L001_17236_1 lane1_3600STDY6167986_AGCCGTGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167987_AAGCCTTC_L001_17236_1 lane1_3600STDY6167988_AGGTATCC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167989_AGGATCTC_L001_17236_1 lane1_3600STDY6167990_CTGTTTGA_L001_17236_1 
#>                                      "0221"                                       "011" 
#> lane1_3600STDY6167991_GGAATTTC_L001_17236_1 lane1_3600STDY6167992_TTGGAGCA_L001_17236_1 
#>                                       "013"                                      "0342" 
#> lane1_3600STDY6167993_AAGGTCTG_L001_17236_1 lane1_3600STDY6167994_AATTAGGC_L001_17236_1 
#>                                      "0342"                                       "011" 
#> lane1_3600STDY6167995_AATCGGGT_L001_17236_1 lane1_3600STDY6167996_AGGTAGAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167997_CTTATTCC_L001_17236_1 lane1_3600STDY6167998_CAGGCTCT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167999_AAAGCACG_L001_17236_1 lane1_3600STDY6168000_GTATACAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168001_GGACATAT_L001_17236_1 lane1_3600STDY6168002_CGGTTGGG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168003_GTCCGTGA_L001_17236_1 lane1_3600STDY6168004_GCCGAACC_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6168005_ACTTTACT_L001_17236_1 lane1_3600STDY6168006_GGGTCCAT_L001_17236_1 
#>                                      "0342"                                       "013" 
#> lane1_3600STDY6168007_ATAACTAG_L001_17236_1 lane1_3600STDY6168008_AATAGAGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168009_TCACCATT_L001_17236_1 lane1_3600STDY6168010_CGCCTGAT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168011_GCGTGAAC_L001_17236_1 lane1_3600STDY6168012_TAAGGGTG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168013_GGTGTCGA_L001_17236_1 lane1_3600STDY6168014_CCGTTAGG_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6168015_TGGCAAAA_L001_17236_1 lane1_3600STDY6168016_CCTACCCG_L001_17236_1 
#>                                       "011"                                      "0222" 
#> lane1_3600STDY6168017_AACAGCGC_L001_17236_1 lane1_3600STDY6168018_TATACATC_L001_17236_1 
#>                                       "013"                                      "0221" 
#> lane1_3600STDY6168019_AAGCGACT_L001_17236_1 lane1_3600STDY6168020_GAAGCGCA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168021_ACCTCTAC_L001_17236_1 lane1_3600STDY6168022_GATTGCGT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168023_GCTGGTTG_L001_17236_1 lane1_3600STDY6168024_ATCGTCCT_L001_17236_1 
#>                                      "0221"                                       "011" 
#> lane1_3600STDY6168025_GGACACGG_L001_17236_1 lane1_3600STDY6168026_CGCACCTA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168027_CTTCGGCT_L001_17236_1 lane1_3600STDY6168028_CGAATCGA_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6168029_TAACAACT_L001_17236_1 lane1_3600STDY6168030_AGCTCTTT_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168031_TAATCCCT_L001_17236_1 lane1_3600STDY6168032_AGGACACT_L001_17236_1 
#>                                       "011"                                      "0342" 
#> lane1_3600STDY6168033_TTACACTA_L001_17236_1 lane1_3600STDY6168034_AAACATCA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168035_CCATAGCT_L001_17236_1 lane1_3600STDY6168036_GTTATGGC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168037_ATCCCCTA_L001_17236_1 lane1_3600STDY6168038_CATACTAC_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6168039_CAATTGTT_L001_17236_1 lane1_3600STDY6168040_AAACCCGT_L001_17236_1 
#>                                       "014"                                      "0221" 
#> lane1_3600STDY6168041_CAGATTTC_L001_17236_1 lane1_3600STDY6168042_GCGTAGGT_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6168043_GGCATTCG_L001_17236_1 lane1_3600STDY6168044_TGGGGCTT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168045_CTGACTAC_L001_17236_1 lane1_3600STDY6168046_AACTTTTA_L001_17236_1 
#>                                       "011"                                      "0342" 
#> lane1_3600STDY6168047_AGGGATTC_L001_17236_1 lane1_3600STDY6168048_CCGAGTAG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168049_GGGGACTA_L001_17236_1 lane1_3600STDY6168050_GGAGTTGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168051_AGCTCATC_L001_17236_1 lane1_3600STDY6168052_TAATCAAC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168053_ACTGGTCG_L001_17236_1 lane1_3600STDY6168054_GACGATTG_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168055_AGCGATGA_L001_17236_1 lane1_3600STDY6168056_GAAGAGAT_L001_17236_1 
#>                                       "011"                                      "0342" 
#> lane1_3600STDY6168057_CGTATGCA_L001_17236_1 lane1_3600STDY6168058_CACGTGCG_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6168059_GCTTAAAC_L001_17236_1 lane1_3600STDY6168060_GTTCCGCA_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6168061_GTATCGTC_L001_17236_1 lane1_3600STDY6168062_GTCCTCAC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168063_GTACGGAC_L001_17236_1 lane1_3600STDY6168064_CATTTTGC_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6168065_TCCTCTCT_L001_17236_1 lane1_3600STDY6168066_AGCAACGA_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6168067_ACAGAAGA_L001_17236_1 lane1_3600STDY6168068_CGACCCTT_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6168069_CTGCCTAG_L001_17236_1 lane1_3600STDY6168070_GAGCGCAT_L001_17236_1 
#>                                      "0221"                                       "013" 
#> lane1_3600STDY6168071_AACTTATC_L001_17236_1 lane1_3600STDY6168072_CCGATGTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168073_TTACTACC_L001_17236_1 lane1_3600STDY6168074_CAAGGAGC_L001_17236_1 
#>                                       "013"                                       "014" 
#> lane1_3600STDY6168075_TGGTTGAC_L001_17236_1 lane1_3600STDY6168076_ACCTGCTG_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane4_3600STDY6184181_ATCACGTT_L004_17480_1 lane4_3600STDY6184182_CGATGTTT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184183_TTAGGCAT_L004_17480_1 lane4_3600STDY6184184_TGACCACT_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184185_ACAGTGGT_L004_17480_1 lane4_3600STDY6184186_GCCAATGT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184187_CAGATCTG_L004_17480_1 lane4_3600STDY6184188_ACTTGATG_L004_17480_1 
#>                                       "032"                                      "0211" 
#> lane4_3600STDY6184189_GATCAGCG_L004_17480_1 lane4_3600STDY6184190_TAGCTTGT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184191_GGCTACAG_L004_17480_1 lane4_3600STDY6184192_CTTGTACT_L004_17480_1 
#>                                       "032"                                      "0211" 
#> lane4_3600STDY6184193_TGGTTGTT_L004_17480_1 lane4_3600STDY6184194_TCTCGGTT_L004_17480_1 
#>                                       "032"                                       "031" 
#> lane4_3600STDY6184195_TAAGCGTT_L004_17480_1 lane4_3600STDY6184196_TCCGTCTT_L004_17480_1 
#>                                       "031"                                      "0341" 
#> lane4_3600STDY6184197_TGTACCTT_L004_17480_1 lane4_3600STDY6184198_TTCTGTGT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184199_TCTGCTGT_L004_17480_1 lane4_3600STDY6184200_TTGGAGGT_L004_17480_1 
#>                                      "0212"                                      "0212" 
#> lane4_3600STDY6184201_TCGAGCGT_L004_17480_1 lane4_3600STDY6184202_TGATACGT_L004_17480_1 
#>                                       "031"                                       "032" 
#> lane4_3600STDY6184203_TGCATAGT_L004_17480_1 lane4_3600STDY6184204_TTGACTCT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184205_TGCGATCT_L004_17480_1 lane4_3600STDY6184206_TTCCTGCT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184207_TAGTGACT_L004_17480_1 lane4_3600STDY6184208_TACAGGAT_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184209_TCCTCAAT_L004_17480_1 lane4_3600STDY6184210_TGTGGTTG_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184211_TAGTCTTG_L004_17480_1 lane4_3600STDY6184212_TTCCATTG_L004_17480_1 
#>                                      "0212"                                      "0211" 
#> lane4_3600STDY6184213_TCGAAGTG_L004_17480_1 lane4_3600STDY6184214_TAACGCTG_L004_17480_1 
#>                                      "0221"                                      "0341" 
#> lane4_3600STDY6184215_TTGGTATG_L004_17480_1 lane4_3600STDY6184216_TGAACTGG_L004_17480_1 
#>                                      "0213"                                      "0222" 
#> lane4_3600STDY6184217_TACTTCGG_L004_17480_1 lane4_3600STDY6184218_TCTCACGG_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184219_TCAGGAGG_L004_17480_1 lane4_3600STDY6184220_TAAGTTCG_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184221_TCCAGTCG_L004_17480_1 lane4_3600STDY6184222_TGTATGCG_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184223_TCATTGAG_L004_17480_1 lane4_3600STDY6184224_TGGCTCAG_L004_17480_1 
#>                                      "0212"                                      "0213" 
#> lane4_3600STDY6184225_TATGCCAG_L004_17480_1 lane4_3600STDY6184226_TCAGATTC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184227_TACTAGTC_L004_17480_1 lane4_3600STDY6184228_TTCAGCTC_L004_17480_1 
#>                                      "0212"                                       "032" 
#> lane4_3600STDY6184229_TGTCTATC_L004_17480_1 lane4_3600STDY6184230_TATGTGGC_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184231_TTACTCGC_L004_17480_1 lane4_3600STDY6184232_TCGTTAGC_L004_17480_1 
#>                                      "0213"                                      "0341" 
#> lane4_3600STDY6184233_TACCGAGC_L004_17480_1 lane4_3600STDY6184234_TGTTCTCC_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184235_TTCGCACC_L004_17480_1 lane4_3600STDY6184236_TTGCGTAC_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184237_TCTACGAC_L004_17480_1 lane4_3600STDY6184238_TGACAGAC_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184239_TAGAACAC_L004_17480_1 lane4_3600STDY6184240_TCATCCTA_L004_17480_1 
#>                                      "0212"                                      "0212" 
#> lane4_3600STDY6184241_TGCTGATA_L004_17480_1 lane4_3600STDY6184242_TAGACGGA_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184243_TGTGAAGA_L004_17480_1 lane4_3600STDY6184244_TCTCTTCA_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184245_TTGTTCCA_L004_17480_1 lane4_3600STDY6184246_TGAAGCCA_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184247_TACCACCA_L004_17480_1 lane4_3600STDY6184248_TGCGTGAA_L004_17480_1 
#>                                      "0222"                                      "0212" 
#> lane4_3600STDY6184249_GGTGAGTT_L004_17480_1 lane4_3600STDY6184250_GATCTCTT_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184251_GTGTCCTT_L004_17480_1 lane4_3600STDY6184252_GACGGATT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184253_GCAACATT_L004_17480_1 lane4_3600STDY6184254_GGTCGTGT_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184255_GAATCTGT_L004_17480_1 lane4_3600STDY6184256_GTACATCT_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184257_GAGGTGCT_L004_17480_1 lane4_3600STDY6184258_GCATGGCT_L004_17480_1 
#>                                       "023"                                      "0211" 
#> lane4_3600STDY6184259_GTTAGCCT_L004_17480_1 lane4_3600STDY6184260_GTCGCTAT_L004_17480_1 
#>                                      "0211"                                      "0222" 
#> lane4_3600STDY6184261_GGAATGAT_L004_17480_1 lane4_3600STDY6184262_GAGCCAAT_L004_17480_1 
#>                                       "023"                                      "0212" 
#> lane4_3600STDY6184263_GCTCCTTG_L004_17480_1 lane4_3600STDY6184264_GTAAGGTG_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184265_GAGGATGG_L004_17480_1 lane4_3600STDY6184266_GTTGTCGG_L004_17480_1 
#>                                      "0211"                                       "032" 
#> lane4_3600STDY6184267_GGATTAGG_L004_17480_1 lane4_3600STDY6184268_GATAGAGG_L004_17480_1 
#>                                      "0213"                                      "0211" 
#> lane4_3600STDY6184269_GTGTGTCG_L004_17480_1 lane4_3600STDY6184270_GCAATCCG_L004_17480_1 
#>                                      "0341"                                       "023" 
#> lane4_3600STDY6184271_GACCTTAG_L004_17480_1 lane4_3600STDY6184272_GCCTGTTC_L004_17480_1 
#>                                      "0222"                                      "0211" 
#> lane4_3600STDY6184273_GCACTGTC_L004_17480_1 lane4_3600STDY6184274_GCTAACTC_L004_17480_1 
#>                                      "0211"                                      "0341" 
#> lane4_3600STDY6184275_GATTCATC_L004_17480_1 lane4_3600STDY6184276_GTCTTGGC_L004_17480_1 
#>                                      "0213"                                       "032" 
#> lane4_3600STDY6184277_GTAGAAGC_L004_17480_1 lane4_3600STDY6184278_GATGGTCC_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184279_GTGCTACC_L004_17480_1 lane4_3600STDY6184280_GCGATTAC_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184281_GGTTGGAC_L004_17480_1 lane4_3600STDY6184282_GGCACAAC_L004_17480_1 
#>                                      "0341"                                      "0222" 
#> lane4_3600STDY6184283_GACACTTA_L004_17480_1 lane4_3600STDY6184284_GTGCAGTA_L004_17480_1 
#>                                      "0211"                                      "0341" 
#> lane4_3600STDY6184285_GGAGTCTA_L004_17480_1 lane4_3600STDY6184286_GCTATGGA_L004_17480_1 
#>                                      "0212"                                      "0211" 
#> lane4_3600STDY6184287_GAGTGCGA_L004_17480_1 lane4_3600STDY6184288_GTAACCGA_L004_17480_1 
#>                                      "0212"                                      "0212" 
#> lane4_3600STDY6184289_GGCAAGCA_L004_17480_1 lane4_3600STDY6184290_GCCTTACA_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184291_GAACGACA_L004_17480_1 lane4_3600STDY6184292_GCAGGTAA_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184293_GCGTCGAA_L004_17480_1 lane4_3600STDY6184294_CGTTCGGT_L004_17480_1 
#>                                      "0341"                                      "0222" 
#> lane4_3600STDY6184295_CACCAGGT_L004_17480_1 lane4_3600STDY6184296_CTGCGAGT_L004_17480_1 
#>                                      "0211"                                      "0341" 
#> lane4_3600STDY6184297_CCGTATCT_L004_17480_1 lane4_3600STDY6184298_CGCTTCCT_L004_17480_1 
#>                                      "0211"                                      "0341" 
#> lane4_3600STDY6184299_CAAGACCT_L004_17480_1 lane4_3600STDY6184300_CACACACT_L004_17480_1 
#>                                      "0211"                                       "032" 
#> lane4_3600STDY6184301_CCTAGTAT_L004_17480_1 lane4_3600STDY6184302_CCACCGAT_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184303_CTTCACAT_L004_17480_1 lane4_3600STDY6184304_CTATCATG_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184305_CATGAATG_L004_17480_1 lane4_3600STDY6184306_CCACTTGG_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184307_CTGTACGG_L004_17480_1 lane4_3600STDY6184308_CTAGATAG_L004_17480_1 
#>                                      "0211"                                      "0341" 
#> lane4_3600STDY6184309_CACTCGAG_L004_17480_1 lane4_3600STDY6184310_CCGACAAG_L004_17480_1 
#>                                      "0222"                                       "032" 
#> lane4_3600STDY6184311_CTTGCTTC_L004_17480_1 lane4_3600STDY6184312_CATAGGTC_L004_17480_1 
#>                                      "0212"                                      "0222" 
#> lane4_3600STDY6184313_CACATTGC_L004_17480_1 lane4_3600STDY6184314_CGCTAAGC_L004_17480_1 
#>                                      "0213"                                      "0212" 
#> lane4_3600STDY6184315_CAACCTCC_L004_17480_1 lane4_3600STDY6184316_CAGCTGAC_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184317_CTCAAGAC_L004_17480_1 lane4_3600STDY6184318_CGTGTCAC_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184319_CCATGCAC_L004_17480_1 lane4_3600STDY6184320_CGTTACTA_L004_17480_1 
#>                                      "0222"                                      "0341" 
#> lane4_3600STDY6184321_CAAGTAGA_L004_17480_1 lane4_3600STDY6184322_CTCTCTCA_L004_17480_1 
#>                                      "0213"                                      "0211" 
#> lane4_3600STDY6184323_CGACTGCA_L004_17480_1 lane4_3600STDY6184324_CCTGAGCA_L004_17480_1 
#>                                      "0212"                                      "0222" 
#> lane4_3600STDY6184325_CAGGCTAA_L004_17480_1 lane4_3600STDY6184326_CGGAGGAA_L004_17480_1 
#>                                       "032"                                      "0211" 
#> lane4_3600STDY6184327_AGGAGATT_L004_17480_1 lane4_3600STDY6184328_AGGCAGCT_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184329_ACGTTCAT_L004_17480_1 lane4_3600STDY6184330_AACGTGTG_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184331_AGACCGTG_L004_17480_1 lane4_3600STDY6184332_ACCTCTGG_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184333_ATCCTAGG_L004_17480_1 lane4_3600STDY6184334_ATCAACCG_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184335_AGGTCACG_L004_17480_1 lane4_3600STDY6184336_ACTGTTAG_L004_17480_1 
#>                                       "032"                                      "0211" 
#> lane4_3600STDY6184337_AAGAGTAG_L004_17480_1 lane4_3600STDY6184338_ATTCGGAG_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184339_ACGCAATC_L004_17480_1 lane4_3600STDY6184340_ACAAGTGC_L004_17480_1 
#>                                      "0213"                                      "0211" 
#> lane4_3600STDY6184341_ATGGATCC_L004_17480_1 lane4_3600STDY6184342_AGAGGACC_L004_17480_1 
#>                                      "0212"                                      "0222" 
#> lane4_3600STDY6184343_ATCTCCAC_L004_17480_1 lane4_3600STDY6184344_ATTGGCTA_L004_17480_1 
#>                                      "0213"                                      "0212" 
#> lane4_3600STDY6184345_AATCCTGA_L004_17480_1 lane4_3600STDY6184346_AGGATTCA_L004_17480_1 
#>                                       "032"                                      "0222" 
#> lane4_3600STDY6184347_AACTGGCA_L004_17480_1 lane4_3600STDY6184348_ACAACGCA_L004_17480_1 
#>                                      "0221"                                      "0222" 
#> lane4_3600STDY6184349_CGGAAACA_L004_17480_1 lane4_3600STDY6184350_AATGAATT_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184351_TAGGACCC_L004_17480_1 lane4_3600STDY6184352_TCTCAGTG_L004_17480_1 
#>                                      "0341"                                      "0222" 
#> lane4_3600STDY6184353_CATGGGAA_L004_17480_1 lane4_3600STDY6184354_CCTAAGAT_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184355_CTCAGATA_L004_17480_1 lane4_3600STDY6184356_CCCATAGG_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184357_GCTATGAC_L004_17480_1 lane4_3600STDY6184358_GCTGTGAA_L004_17480_1 
#>                                      "0222"                                      "0222" 
#> lane4_3600STDY6184359_ACCTTCAA_L004_17480_1 lane4_3600STDY6184360_ACAAAGCC_L004_17480_1 
#>                                      "0223"                                      "0221" 
#> lane4_3600STDY6184361_CAAAACCG_L004_17480_1 lane4_3600STDY6184362_GCTGGACA_L004_17480_1 
#>                                      "0211"                                       "032" 
#> lane4_3600STDY6184363_AAGTCGTA_L004_17480_1 lane4_3600STDY6184364_CATCCGTA_L004_17480_1 
#>                                      "0211"                                       "023" 
#> lane4_3600STDY6184365_TTGTGTCT_L004_17480_1 lane4_3600STDY6184366_TGCTCTAG_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184367_ACCCAACA_L004_17480_1 lane4_3600STDY6184368_CGATCTGA_L004_17480_1 
#>                                      "0222"                                      "0211" 
#> lane4_3600STDY6184369_GTTCCACG_L004_17480_1 lane4_3600STDY6184370_ACTCTTTC_L004_17480_1 
#>                                      "0212"                                      "0213" 
#> lane4_3600STDY6184371_TATTGGAG_L004_17480_1 lane4_3600STDY6184372_TAAACATA_L004_17480_1 
#>                                      "0221"                                      "0221" 
#> lane4_3600STDY6184373_GTAAGATA_L004_17480_1 lane4_3600STDY6184374_TACCGCAA_L004_17480_1 
#>                                      "0223"                                       "032" 
#> lane4_3600STDY6184375_TATCTCCT_L004_17480_1 lane4_3600STDY6184376_TGTCATCT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184377_ATAGCTCT_L004_17480_1 lane4_3600STDY6184378_AGTCCAAC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184379_TTTGGGCA_L004_17480_1 lane4_3600STDY6184380_TCTGACGC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184381_TGTCGACT_L004_17480_1 lane4_3600STDY6184382_GTCACGTA_L004_17480_1 
#>                                       "032"                                       "031" 
#> lane4_3600STDY6184383_TTGAGCGA_L004_17480_1 lane4_3600STDY6184384_GAGACATA_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184385_GTCAAGCT_L004_17480_1 lane4_3600STDY6184386_AGCAAGTT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184387_GACGCTCA_L004_17480_1 lane4_3600STDY6184388_ACGGCAGC_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184389_AGAACTGA_L004_17480_1 lane4_3600STDY6184390_CGCCTTTG_L004_17480_1 
#>                                      "0212"                                      "0222" 
#> lane4_3600STDY6184391_TAAGGTCA_L004_17480_1 lane4_3600STDY6184392_ACGTTGGC_L004_17480_1 
#>                                      "0222"                                      "0212" 
#> lane4_3600STDY6184393_CCAGCTTA_L004_17480_1 lane4_3600STDY6184394_GAATCCTA_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184395_ACTTCGTA_L004_17480_1 lane4_3600STDY6184396_TAGTCGGT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184397_CGCACGAG_L004_17480_1 lane4_3600STDY6184398_ACGTACTA_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184399_AGCGCCAA_L004_17480_1 lane4_3600STDY6184400_GCCTGCCC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184401_AGGACGAT_L004_17480_1 lane4_3600STDY6184402_CTTGACCG_L004_17480_1 
#>                                      "0213"                                       "032" 
#> lane4_3600STDY6184403_AGGTCTAA_L004_17480_1 lane4_3600STDY6184404_CGAGATCC_L004_17480_1 
#>                                      "0213"                                       "032" 
#> lane4_3600STDY6184405_ATTAGCGG_L004_17480_1 lane4_3600STDY6184406_GCGCTGAT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184407_TGCTGAAC_L004_17480_1 lane4_3600STDY6184408_GAGGGCAG_L004_17480_1 
#>                                       "032"                                      "0213" 
#> lane4_3600STDY6184409_GTTTTCAC_L004_17480_1 lane4_3600STDY6184410_GAGATGCC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184411_TTGAGAAG_L004_17480_1 lane4_3600STDY6184412_GCATCCGG_L004_17480_1 
#>                                       "032"                                       "023" 
#> lane4_3600STDY6184413_GTCACCAG_L004_17480_1 lane4_3600STDY6184414_GAGGTCGC_L004_17480_1 
#>                                      "0211"                                      "0222" 
#> lane4_3600STDY6184415_AAGGGGTA_L004_17480_1 lane4_3600STDY6184416_TTTTACGT_L004_17480_1 
#>                                      "0212"                                      "0211" 
#> lane4_3600STDY6184417_TTCCTACA_L004_17480_1 lane4_3600STDY6184418_AGTGTAGT_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184419_GTGGCCAA_L004_17480_1 lane4_3600STDY6184420_AAATACTC_L004_17480_1 
#>                                      "0212"                                       "032" 
#> lane4_3600STDY6184421_CACCCGTC_L004_17480_1 lane4_3600STDY6184422_TCGTGGTT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184423_ACTTGGGG_L004_17480_1 lane4_3600STDY6184424_GGCTGCTT_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184425_CAGGGTCG_L004_17480_1 lane4_3600STDY6184426_CTCGTCGA_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184427_TCTACAGT_L004_17480_1 lane4_3600STDY6184428_CTTCTAGA_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184429_AACGGCTT_L004_17480_1 lane4_3600STDY6184430_ATAAGACT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184431_GTTTTTCG_L004_17480_1 lane4_3600STDY6184432_ATTGGTAT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184433_CGCCAGTA_L004_17480_1 lane4_3600STDY6184434_AAGCCGAA_L004_17480_1 
#>                                      "0223"                                       "032" 
#> lane4_3600STDY6184435_TGACCCAC_L004_17480_1 lane4_3600STDY6184436_ATTGCACA_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184437_CTTTTGAT_L004_17480_1 lane4_3600STDY6184438_TAGCGAGA_L004_17480_1 
#>                                      "0213"                                      "0222" 
#> lane4_3600STDY6184439_TTCGCAGG_L004_17480_1 lane4_3600STDY6184440_TAGTTATT_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184441_TCCTCCGA_L004_17480_1 lane4_3600STDY6184442_GCGGGTCT_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184443_GATTCTAT_L004_17480_1 lane4_3600STDY6184444_ATGCAAAG_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184445_GTCTGAGG_L004_17480_1 lane4_3600STDY6184446_TCTGGCGA_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184447_AATTTGCG_L004_17480_1 lane4_3600STDY6184448_TGGGTTGG_L004_17480_1 
#>                                      "0222"                                       "023" 
#> lane4_3600STDY6184449_AGTTGAAA_L004_17480_1 lane4_3600STDY6184450_GACCGGAA_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184451_GATCGAAC_L004_17480_1 lane4_3600STDY6184452_GTATAGGG_L004_17480_1 
#>                                      "0342"                                      "0341" 
#> lane4_3600STDY6184453_GGTAAGAG_L004_17480_1 lane4_3600STDY6184454_AGTCCGAT_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184455_ATACAGGC_L004_17480_1 lane4_3600STDY6184456_TGAGACTC_L004_17480_1 
#>                                      "0213"                                      "0222" 
#> lane4_3600STDY6184457_ACTCAGGA_L004_17480_1 lane4_3600STDY6184458_GTGTCTGA_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184459_CTTGAATC_L004_17480_1 lane4_3600STDY6184460_CCGCATGA_L004_17480_1 
#>                                      "0211"                                      "0222" 
#> lane4_3600STDY6184461_AAGTAACA_L004_17480_1 lane4_3600STDY6184462_GTGGTACT_L004_17480_1 
#>                                      "0222"                                      "0222" 
#> lane4_3600STDY6184463_AGCTGTGC_L004_17480_1 lane4_3600STDY6184464_TTACCTTC_L004_17480_1 
#>                                      "0222"                                      "0222" 
#> lane4_3600STDY6184465_TCCGGGTA_L004_17480_1 lane4_3600STDY6184466_CTACGTAA_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184467_TCGGACCG_L004_17480_1 lane4_3600STDY6184468_ATGCGTCG_L004_17480_1 
#>                                      "0211"                                       "032" 
#> lane4_3600STDY6184469_TTCTTAGC_L004_17480_1 lane4_3600STDY6184470_TGAGTAAG_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184471_AAGTGATA_L004_17480_1 lane4_3600STDY6184472_TCGATGCG_L004_17480_1 
#>                                      "0213"                                      "0341" 
#> lane4_3600STDY6184473_TATTCTGG_L004_17480_1 lane4_3600STDY6184474_AGCCGTGA_L004_17480_1 
#>                                      "0213"                                      "0211" 
#> lane4_3600STDY6184475_AAGCCTTC_L004_17480_1 lane4_3600STDY6184476_AGGTATCC_L004_17480_1 
#>                                      "0213"                                      "0341" 
#> lane4_3600STDY6184477_AGGATCTC_L004_17480_1 lane4_3600STDY6184478_CTGTTTGA_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184479_GGAATTTC_L004_17480_1 lane4_3600STDY6184480_TTGGAGCA_L004_17480_1 
#>                                      "0341"                                      "0213" 
#> lane4_3600STDY6184481_AAGGTCTG_L004_17480_1 lane4_3600STDY6184482_AATTAGGC_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184483_AATCGGGT_L004_17480_1 lane4_3600STDY6184484_AGGTAGAC_L004_17480_1 
#>                                      "0212"                                      "0212" 
#> lane4_3600STDY6184485_CTTATTCC_L004_17480_1 lane4_3600STDY6184486_CAGGCTCT_L004_17480_1 
#>                                      "0341"                                      "0222" 
#> lane4_3600STDY6184487_AAAGCACG_L004_17480_1 lane4_3600STDY6184488_GTATACAC_L004_17480_1 
#>                                      "0222"                                      "0211" 
#> lane4_3600STDY6184489_GGACATAT_L004_17480_1 lane4_3600STDY6184490_CGGTTGGG_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184491_GTCCGTGA_L004_17480_1 lane4_3600STDY6184492_GCCGAACC_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184493_ACTTTACT_L004_17480_1 lane4_3600STDY6184494_GGGTCCAT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184495_ATAACTAG_L004_17480_1 lane4_3600STDY6184496_AATAGAGA_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184497_TCACCATT_L004_17480_1 lane4_3600STDY6184498_CGCCTGAT_L004_17480_1 
#>                                      "0341"                                      "0222" 
#> lane4_3600STDY6184499_GCGTGAAC_L004_17480_1 lane4_3600STDY6184500_TAAGGGTG_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184501_GGTGTCGA_L004_17480_1 lane4_3600STDY6184502_CCGTTAGG_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184503_TGGCAAAA_L004_17480_1 lane4_3600STDY6184504_CCTACCCG_L004_17480_1 
#>                                      "0213"                                      "0222" 
#> lane4_3600STDY6184505_AACAGCGC_L004_17480_1 lane4_3600STDY6184506_TATACATC_L004_17480_1 
#>                                      "0213"                                      "0341" 
#> lane4_3600STDY6184507_AAGCGACT_L004_17480_1 lane4_3600STDY6184508_GAAGCGCA_L004_17480_1 
#>                                      "0211"                                      "0222" 
#> lane4_3600STDY6184509_ACCTCTAC_L004_17480_1 lane4_3600STDY6184510_GATTGCGT_L004_17480_1 
#>                                      "0222"                                       "023" 
#> lane4_3600STDY6184511_GCTGGTTG_L004_17480_1 lane4_3600STDY6184512_ATCGTCCT_L004_17480_1 
#>                                      "0211"                                      "0211" 
#> lane4_3600STDY6184513_GGACACGG_L004_17480_1 lane4_3600STDY6184514_CGCACCTA_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184515_CTTCGGCT_L004_17480_1 lane4_3600STDY6184516_CGAATCGA_L004_17480_1 
#>                                      "0212"                                       "032" 
#> lane4_3600STDY6184517_TAACAACT_L004_17480_1 lane4_3600STDY6184518_AGCTCTTT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184519_TAATCCCT_L004_17480_1 lane4_3600STDY6184520_AGGACACT_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184521_TTACACTA_L004_17480_1 lane4_3600STDY6184522_AAACATCA_L004_17480_1 
#>                                      "0341"                                      "0213" 
#> lane4_3600STDY6184523_CCATAGCT_L004_17480_1 lane4_3600STDY6184524_GTTATGGC_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184525_ATCCCCTA_L004_17480_1 lane4_3600STDY6184526_CATACTAC_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184527_CAATTGTT_L004_17480_1 lane4_3600STDY6184528_AAACCCGT_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184529_CAGATTTC_L004_17480_1 lane4_3600STDY6184530_GCGTAGGT_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184531_GGCATTCG_L004_17480_1 lane4_3600STDY6184532_TGGGGCTT_L004_17480_1 
#>                                      "0341"                                      "0212" 
#> lane4_3600STDY6184533_CTGACTAC_L004_17480_1 lane4_3600STDY6184534_AACTTTTA_L004_17480_1 
#>                                      "0212"                                      "0211" 
#> lane4_3600STDY6184535_AGGGATTC_L004_17480_1 lane4_3600STDY6184536_CCGAGTAG_L004_17480_1 
#>                                      "0221"                                      "0212" 
#> lane4_3600STDY6184537_GGGGACTA_L004_17480_1 lane4_3600STDY6184538_GGAGTTGA_L004_17480_1 
#>                                       "032"                                      "0212" 
#> lane4_3600STDY6184539_AGCTCATC_L004_17480_1 lane4_3600STDY6184540_TAATCAAC_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184541_ACTGGTCG_L004_17480_1 lane4_3600STDY6184542_GACGATTG_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184543_AGCGATGA_L004_17480_1 lane4_3600STDY6184544_GAAGAGAT_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184545_CGTATGCA_L004_17480_1 lane4_3600STDY6184546_CACGTGCG_L004_17480_1 
#>                                      "0213"                                      "0213" 
#> lane4_3600STDY6184547_GCTTAAAC_L004_17480_1 lane4_3600STDY6184548_GTTCCGCA_L004_17480_1 
#>                                       "032"                                      "0221" 
#> lane4_3600STDY6184549_GTATCGTC_L004_17480_1 lane4_3600STDY6184550_GTCCTCAC_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184551_GTACGGAC_L004_17480_1 lane4_3600STDY6184552_CATTTTGC_L004_17480_1 
#>                                      "0221"                                      "0221" 
#> lane4_3600STDY6184553_TCCTCTCT_L004_17480_1 lane4_3600STDY6184554_AGCAACGA_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184555_ACAGAAGA_L004_17480_1 lane4_3600STDY6184556_CGACCCTT_L004_17480_1 
#>                                      "0212"                                      "0341" 
#> lane4_3600STDY6184557_CTGCCTAG_L004_17480_1 lane4_3600STDY6184558_GAGCGCAT_L004_17480_1 
#>                                      "0212"                                      "0222" 
#> lane4_3600STDY6184559_AACTTATC_L004_17480_1 lane4_3600STDY6184560_CCGATGTA_L004_17480_1 
#>                                      "0341"                                      "0211" 
#> lane4_3600STDY6184561_TTACTACC_L004_17480_1 lane4_3600STDY6184562_CAAGGAGC_L004_17480_1 
#>                                      "0341"                                      "0221" 
#> lane4_3600STDY6184563_TGGTTGAC_L004_17480_1 lane4_3600STDY6184564_ACCTGCTG_L004_17480_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6183797_ATCACGTT_L001_17592_1 lane1_3600STDY6183798_CGATGTTT_L001_17592_1 
#>                                      "0221"                                       "031" 
#> lane1_3600STDY6183799_TTAGGCAT_L001_17592_1 lane1_3600STDY6183800_TGACCACT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183801_ACAGTGGT_L001_17592_1 lane1_3600STDY6183802_GCCAATGT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183803_CAGATCTG_L001_17592_1 lane1_3600STDY6183804_ACTTGATG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183805_GATCAGCG_L001_17592_1 lane1_3600STDY6183806_TAGCTTGT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183807_GGCTACAG_L001_17592_1 lane1_3600STDY6183808_CTTGTACT_L001_17592_1 
#>                                       "031"                                      "0223" 
#> lane1_3600STDY6183809_TGGTTGTT_L001_17592_1 lane1_3600STDY6183810_TCTCGGTT_L001_17592_1 
#>                                       "031"                                      "0221" 
#> lane1_3600STDY6183811_TAAGCGTT_L001_17592_1 lane1_3600STDY6183812_TCCGTCTT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183813_TGTACCTT_L001_17592_1 lane1_3600STDY6183814_TTCTGTGT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183815_TCTGCTGT_L001_17592_1 lane1_3600STDY6183816_TTGGAGGT_L001_17592_1 
#>                                       "033"                                      "0221" 
#> lane1_3600STDY6183817_TCGAGCGT_L001_17592_1 lane1_3600STDY6183818_TGATACGT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183819_TGCATAGT_L001_17592_1 lane1_3600STDY6183820_TTGACTCT_L001_17592_1 
#>                                       "031"                                      "0221" 
#> lane1_3600STDY6183821_TGCGATCT_L001_17592_1 lane1_3600STDY6183822_TTCCTGCT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183823_TAGTGACT_L001_17592_1 lane1_3600STDY6183824_TACAGGAT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183825_TCCTCAAT_L001_17592_1 lane1_3600STDY6183826_TGTGGTTG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183827_TAGTCTTG_L001_17592_1 lane1_3600STDY6183828_TTCCATTG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183829_TCGAAGTG_L001_17592_1 lane1_3600STDY6183830_TAACGCTG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183831_TTGGTATG_L001_17592_1 lane1_3600STDY6183832_TGAACTGG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183833_TACTTCGG_L001_17592_1 lane1_3600STDY6183834_TCTCACGG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183835_TCAGGAGG_L001_17592_1 lane1_3600STDY6183836_TAAGTTCG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183837_TCCAGTCG_L001_17592_1 lane1_3600STDY6183838_TGTATGCG_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183839_TCATTGAG_L001_17592_1 lane1_3600STDY6183840_TGGCTCAG_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6183841_TATGCCAG_L001_17592_1 lane1_3600STDY6183842_TCAGATTC_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6183843_TACTAGTC_L001_17592_1 lane1_3600STDY6183844_TTCAGCTC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183845_TGTCTATC_L001_17592_1 lane1_3600STDY6183846_TATGTGGC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183847_TTACTCGC_L001_17592_1 lane1_3600STDY6183848_TCGTTAGC_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183849_TACCGAGC_L001_17592_1 lane1_3600STDY6183850_TGTTCTCC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183851_TTCGCACC_L001_17592_1 lane1_3600STDY6183852_TTGCGTAC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183853_TCTACGAC_L001_17592_1 lane1_3600STDY6183854_TGACAGAC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183855_TAGAACAC_L001_17592_1 lane1_3600STDY6183856_TCATCCTA_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183857_TGCTGATA_L001_17592_1 lane1_3600STDY6183858_TAGACGGA_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6183859_TGTGAAGA_L001_17592_1 lane1_3600STDY6183860_TCTCTTCA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183861_TTGTTCCA_L001_17592_1 lane1_3600STDY6183862_TGAAGCCA_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183863_TACCACCA_L001_17592_1 lane1_3600STDY6183864_TGCGTGAA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6183865_GGTGAGTT_L001_17592_1 lane1_3600STDY6183866_GATCTCTT_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6183867_GTGTCCTT_L001_17592_1 lane1_3600STDY6183868_GACGGATT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183869_GCAACATT_L001_17592_1 lane1_3600STDY6183870_GGTCGTGT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183871_GAATCTGT_L001_17592_1 lane1_3600STDY6183872_GTACATCT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183873_GAGGTGCT_L001_17592_1 lane1_3600STDY6183874_GCATGGCT_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6183875_GTTAGCCT_L001_17592_1 lane1_3600STDY6183876_GTCGCTAT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183877_GGAATGAT_L001_17592_1 lane1_3600STDY6183878_GAGCCAAT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183879_GCTCCTTG_L001_17592_1 lane1_3600STDY6183880_GTAAGGTG_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183881_GAGGATGG_L001_17592_1 lane1_3600STDY6183882_GTTGTCGG_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183883_GGATTAGG_L001_17592_1 lane1_3600STDY6183884_GATAGAGG_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6183885_GTGTGTCG_L001_17592_1 lane1_3600STDY6183886_GCAATCCG_L001_17592_1 
#>                                       "023"                                      "0222" 
#> lane1_3600STDY6183887_GACCTTAG_L001_17592_1 lane1_3600STDY6183888_GCCTGTTC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183889_GCACTGTC_L001_17592_1 lane1_3600STDY6183890_GCTAACTC_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6183891_GATTCATC_L001_17592_1 lane1_3600STDY6183892_GTCTTGGC_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6183893_GTAGAAGC_L001_17592_1 lane1_3600STDY6183894_GATGGTCC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183895_GTGCTACC_L001_17592_1 lane1_3600STDY6183896_GCGATTAC_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183897_GGTTGGAC_L001_17592_1 lane1_3600STDY6183898_GGCACAAC_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6183899_GACACTTA_L001_17592_1 lane1_3600STDY6183900_GTGCAGTA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183901_GGAGTCTA_L001_17592_1 lane1_3600STDY6183902_GCTATGGA_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183903_GAGTGCGA_L001_17592_1 lane1_3600STDY6183904_GTAACCGA_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183905_GGCAAGCA_L001_17592_1 lane1_3600STDY6183906_GCCTTACA_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6183907_GAACGACA_L001_17592_1 lane1_3600STDY6183908_GCAGGTAA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6183909_GCGTCGAA_L001_17592_1 lane1_3600STDY6183910_CGTTCGGT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183911_CACCAGGT_L001_17592_1 lane1_3600STDY6183912_CTGCGAGT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183913_CCGTATCT_L001_17592_1 lane1_3600STDY6183914_CGCTTCCT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183915_CAAGACCT_L001_17592_1 lane1_3600STDY6183916_CACACACT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183917_CCTAGTAT_L001_17592_1 lane1_3600STDY6183918_CCACCGAT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183919_CTTCACAT_L001_17592_1 lane1_3600STDY6183920_CTATCATG_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183921_CATGAATG_L001_17592_1 lane1_3600STDY6183922_CCACTTGG_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183923_CTGTACGG_L001_17592_1 lane1_3600STDY6183924_CTAGATAG_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183925_CACTCGAG_L001_17592_1 lane1_3600STDY6183926_CCGACAAG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183927_CTTGCTTC_L001_17592_1 lane1_3600STDY6183928_CATAGGTC_L001_17592_1 
#>                                       "023"                                      "0212" 
#> lane1_3600STDY6183929_CACATTGC_L001_17592_1 lane1_3600STDY6183930_CGCTAAGC_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6183931_CAACCTCC_L001_17592_1 lane1_3600STDY6183932_CAGCTGAC_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6183933_CTCAAGAC_L001_17592_1 lane1_3600STDY6183934_CGTGTCAC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183935_CCATGCAC_L001_17592_1 lane1_3600STDY6183936_CGTTACTA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183937_CAAGTAGA_L001_17592_1 lane1_3600STDY6183938_CTCTCTCA_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183939_CGACTGCA_L001_17592_1 lane1_3600STDY6183940_CCTGAGCA_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183941_CAGGCTAA_L001_17592_1 lane1_3600STDY6183942_CGGAGGAA_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183943_AGGAGATT_L001_17592_1 lane1_3600STDY6183944_AGGCAGCT_L001_17592_1 
#>                                       "031"                                      "0213" 
#> lane1_3600STDY6183945_ACGTTCAT_L001_17592_1 lane1_3600STDY6183946_AACGTGTG_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183947_AGACCGTG_L001_17592_1 lane1_3600STDY6183948_ACCTCTGG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183949_ATCCTAGG_L001_17592_1 lane1_3600STDY6183950_ATCAACCG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183951_AGGTCACG_L001_17592_1 lane1_3600STDY6183952_ACTGTTAG_L001_17592_1 
#>                                       "031"                                      "0221" 
#> lane1_3600STDY6183953_AAGAGTAG_L001_17592_1 lane1_3600STDY6183954_ATTCGGAG_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6183955_ACGCAATC_L001_17592_1 lane1_3600STDY6183956_ACAAGTGC_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6183957_ATGGATCC_L001_17592_1 lane1_3600STDY6183958_AGAGGACC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183959_ATCTCCAC_L001_17592_1 lane1_3600STDY6183960_ATTGGCTA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183961_AATCCTGA_L001_17592_1 lane1_3600STDY6183962_AGGATTCA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183963_AACTGGCA_L001_17592_1 lane1_3600STDY6183964_ACAACGCA_L001_17592_1 
#>                                       "033"                                      "0223" 
#> lane1_3600STDY6183965_CGGAAACA_L001_17592_1 lane1_3600STDY6183966_AATGAATT_L001_17592_1 
#>                                      "0222"                                       "033" 
#> lane1_3600STDY6183967_TAGGACCC_L001_17592_1 lane1_3600STDY6183968_TCTCAGTG_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183969_CATGGGAA_L001_17592_1 lane1_3600STDY6183970_CCTAAGAT_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6183971_CTCAGATA_L001_17592_1 lane1_3600STDY6183972_CCCATAGG_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183973_GCTATGAC_L001_17592_1 lane1_3600STDY6183974_GCTGTGAA_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183975_ACCTTCAA_L001_17592_1 lane1_3600STDY6183976_ACAAAGCC_L001_17592_1 
#>                                       "023"                                      "0211" 
#> lane1_3600STDY6183977_CAAAACCG_L001_17592_1 lane1_3600STDY6183978_GCTGGACA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183979_AAGTCGTA_L001_17592_1 lane1_3600STDY6183980_CATCCGTA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183981_TTGTGTCT_L001_17592_1 lane1_3600STDY6183982_TGCTCTAG_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183983_ACCCAACA_L001_17592_1 lane1_3600STDY6183984_CGATCTGA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183985_GTTCCACG_L001_17592_1 lane1_3600STDY6183986_ACTCTTTC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183987_TATTGGAG_L001_17592_1 lane1_3600STDY6183988_TAAACATA_L001_17592_1 
#>                                       "023"                                      "0221" 
#> lane1_3600STDY6183989_GTAAGATA_L001_17592_1 lane1_3600STDY6183990_TACCGCAA_L001_17592_1 
#>                                      "0221"                                       "031" 
#> lane1_3600STDY6183991_TATCTCCT_L001_17592_1 lane1_3600STDY6183992_TGTCATCT_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6183993_ATAGCTCT_L001_17592_1 lane1_3600STDY6183994_AGTCCAAC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183995_TTTGGGCA_L001_17592_1 lane1_3600STDY6183996_TCTGACGC_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6183997_TGTCGACT_L001_17592_1 lane1_3600STDY6183998_GTCACGTA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183999_TTGAGCGA_L001_17592_1 lane1_3600STDY6184000_GAGACATA_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6184001_GTCAAGCT_L001_17592_1 lane1_3600STDY6184002_AGCAAGTT_L001_17592_1 
#>                                      "0221"                                       "031" 
#> lane1_3600STDY6184003_GACGCTCA_L001_17592_1 lane1_3600STDY6184004_ACGGCAGC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184005_AGAACTGA_L001_17592_1 lane1_3600STDY6184006_CGCCTTTG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184007_TAAGGTCA_L001_17592_1 lane1_3600STDY6184008_ACGTTGGC_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184009_CCAGCTTA_L001_17592_1 lane1_3600STDY6184010_GAATCCTA_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184011_ACTTCGTA_L001_17592_1 lane1_3600STDY6184012_TAGTCGGT_L001_17592_1 
#>                                      "0223"                                       "031" 
#> lane1_3600STDY6184013_CGCACGAG_L001_17592_1 lane1_3600STDY6184014_ACGTACTA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184015_AGCGCCAA_L001_17592_1 lane1_3600STDY6184016_GCCTGCCC_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6184017_AGGACGAT_L001_17592_1 lane1_3600STDY6184018_CTTGACCG_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6184019_AGGTCTAA_L001_17592_1 lane1_3600STDY6184020_CGAGATCC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184021_ATTAGCGG_L001_17592_1 lane1_3600STDY6184022_GCGCTGAT_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6184023_TGCTGAAC_L001_17592_1 lane1_3600STDY6184024_GAGGGCAG_L001_17592_1 
#>                                      "0221"                                       "031" 
#> lane1_3600STDY6184025_GTTTTCAC_L001_17592_1 lane1_3600STDY6184026_GAGATGCC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184027_TTGAGAAG_L001_17592_1 lane1_3600STDY6184028_GCATCCGG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184029_GTCACCAG_L001_17592_1 lane1_3600STDY6184030_GAGGTCGC_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184031_AAGGGGTA_L001_17592_1 lane1_3600STDY6184032_TTTTACGT_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184033_TTCCTACA_L001_17592_1 lane1_3600STDY6184034_AGTGTAGT_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6184035_GTGGCCAA_L001_17592_1 lane1_3600STDY6184036_AAATACTC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184037_CACCCGTC_L001_17592_1 lane1_3600STDY6184038_TCGTGGTT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184039_ACTTGGGG_L001_17592_1 lane1_3600STDY6184040_GGCTGCTT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184041_CAGGGTCG_L001_17592_1 lane1_3600STDY6184042_CTCGTCGA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184043_TCTACAGT_L001_17592_1 lane1_3600STDY6184044_CTTCTAGA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184045_AACGGCTT_L001_17592_1 lane1_3600STDY6184046_ATAAGACT_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6184047_GTTTTTCG_L001_17592_1 lane1_3600STDY6184048_ATTGGTAT_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6184049_CGCCAGTA_L001_17592_1 lane1_3600STDY6184050_AAGCCGAA_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184051_TGACCCAC_L001_17592_1 lane1_3600STDY6184052_ATTGCACA_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6184053_CTTTTGAT_L001_17592_1 lane1_3600STDY6184054_TAGCGAGA_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184055_TTCGCAGG_L001_17592_1 lane1_3600STDY6184056_TAGTTATT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184057_TCCTCCGA_L001_17592_1 lane1_3600STDY6184058_GCGGGTCT_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6184059_GATTCTAT_L001_17592_1 lane1_3600STDY6184060_ATGCAAAG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184061_GTCTGAGG_L001_17592_1 lane1_3600STDY6184062_TCTGGCGA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184063_AATTTGCG_L001_17592_1 lane1_3600STDY6184064_TGGGTTGG_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184065_AGTTGAAA_L001_17592_1 lane1_3600STDY6184066_GACCGGAA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184067_GATCGAAC_L001_17592_1 lane1_3600STDY6184068_GTATAGGG_L001_17592_1 
#>                                      "0222"                                      "0222" 
#> lane1_3600STDY6184069_GGTAAGAG_L001_17592_1 lane1_3600STDY6184070_AGTCCGAT_L001_17592_1 
#>                                      "0342"                                       "023" 
#> lane1_3600STDY6184071_ATACAGGC_L001_17592_1 lane1_3600STDY6184072_TGAGACTC_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6184073_ACTCAGGA_L001_17592_1 lane1_3600STDY6184074_GTGTCTGA_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184075_CTTGAATC_L001_17592_1 lane1_3600STDY6184076_CCGCATGA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184077_AAGTAACA_L001_17592_1 lane1_3600STDY6184078_GTGGTACT_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184079_AGCTGTGC_L001_17592_1 lane1_3600STDY6184080_TTACCTTC_L001_17592_1 
#>                                      "0222"                                       "033" 
#> lane1_3600STDY6184081_TCCGGGTA_L001_17592_1 lane1_3600STDY6184082_CTACGTAA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184083_TCGGACCG_L001_17592_1 lane1_3600STDY6184084_ATGCGTCG_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184085_TTCTTAGC_L001_17592_1 lane1_3600STDY6184086_TGAGTAAG_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184087_AAGTGATA_L001_17592_1 lane1_3600STDY6184088_TCGATGCG_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184089_TATTCTGG_L001_17592_1 lane1_3600STDY6184090_AGCCGTGA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184091_AAGCCTTC_L001_17592_1 lane1_3600STDY6184092_AGGTATCC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184093_AGGATCTC_L001_17592_1 lane1_3600STDY6184094_CTGTTTGA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184095_GGAATTTC_L001_17592_1 lane1_3600STDY6184096_TTGGAGCA_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6184097_AAGGTCTG_L001_17592_1 lane1_3600STDY6184098_AATTAGGC_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184099_AATCGGGT_L001_17592_1 lane1_3600STDY6184100_AGGTAGAC_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184101_CTTATTCC_L001_17592_1 lane1_3600STDY6184102_CAGGCTCT_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184103_AAAGCACG_L001_17592_1 lane1_3600STDY6184104_GTATACAC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184105_GGACATAT_L001_17592_1 lane1_3600STDY6184106_CGGTTGGG_L001_17592_1 
#>                                      "0222"                                       "023" 
#> lane1_3600STDY6184107_GTCCGTGA_L001_17592_1 lane1_3600STDY6184108_GCCGAACC_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184109_ACTTTACT_L001_17592_1 lane1_3600STDY6184110_GGGTCCAT_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184111_ATAACTAG_L001_17592_1 lane1_3600STDY6184112_AATAGAGA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184113_TCACCATT_L001_17592_1 lane1_3600STDY6184114_CGCCTGAT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184115_GCGTGAAC_L001_17592_1 lane1_3600STDY6184116_TAAGGGTG_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184117_GGTGTCGA_L001_17592_1 lane1_3600STDY6184118_CCGTTAGG_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184119_TGGCAAAA_L001_17592_1 lane1_3600STDY6184120_CCTACCCG_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6184121_AACAGCGC_L001_17592_1 lane1_3600STDY6184122_TATACATC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184123_AAGCGACT_L001_17592_1 lane1_3600STDY6184124_GAAGCGCA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184125_ACCTCTAC_L001_17592_1 lane1_3600STDY6184126_GATTGCGT_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184127_GCTGGTTG_L001_17592_1 lane1_3600STDY6184128_ATCGTCCT_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184129_GGACACGG_L001_17592_1 lane1_3600STDY6184130_CGCACCTA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184131_CTTCGGCT_L001_17592_1 lane1_3600STDY6184132_CGAATCGA_L001_17592_1 
#>                                       "031"                                      "0222" 
#> lane1_3600STDY6184133_TAACAACT_L001_17592_1 lane1_3600STDY6184134_AGCTCTTT_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184135_TAATCCCT_L001_17592_1 lane1_3600STDY6184136_AGGACACT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184137_TTACACTA_L001_17592_1 lane1_3600STDY6184138_AAACATCA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184139_CCATAGCT_L001_17592_1 lane1_3600STDY6184140_GTTATGGC_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184141_ATCCCCTA_L001_17592_1 lane1_3600STDY6184142_CATACTAC_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6184143_CAATTGTT_L001_17592_1 lane1_3600STDY6184144_AAACCCGT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184145_CAGATTTC_L001_17592_1 lane1_3600STDY6184146_GCGTAGGT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184147_GGCATTCG_L001_17592_1 lane1_3600STDY6184148_TGGGGCTT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184149_CTGACTAC_L001_17592_1 lane1_3600STDY6184150_AACTTTTA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184151_AGGGATTC_L001_17592_1 lane1_3600STDY6184152_CCGAGTAG_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6184153_GGGGACTA_L001_17592_1 lane1_3600STDY6184154_GGAGTTGA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184155_AGCTCATC_L001_17592_1 lane1_3600STDY6184156_TAATCAAC_L001_17592_1 
#>                                       "031"                                      "0221" 
#> lane1_3600STDY6184157_ACTGGTCG_L001_17592_1 lane1_3600STDY6184158_GACGATTG_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6184159_AGCGATGA_L001_17592_1 lane1_3600STDY6184160_GAAGAGAT_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184161_CGTATGCA_L001_17592_1 lane1_3600STDY6184162_CACGTGCG_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184163_GCTTAAAC_L001_17592_1 lane1_3600STDY6184164_GTTCCGCA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184165_GTATCGTC_L001_17592_1 lane1_3600STDY6184166_GTCCTCAC_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184167_GTACGGAC_L001_17592_1 lane1_3600STDY6184168_CATTTTGC_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6184169_TCCTCTCT_L001_17592_1 lane1_3600STDY6184170_AGCAACGA_L001_17592_1 
#>                                      "0341"                                       "023" 
#> lane1_3600STDY6184171_ACAGAAGA_L001_17592_1 lane1_3600STDY6184172_CGACCCTT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184173_CTGCCTAG_L001_17592_1 lane1_3600STDY6184174_GAGCGCAT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184175_AACTTATC_L001_17592_1 lane1_3600STDY6184176_CCGATGTA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184177_TTACTACC_L001_17592_1 lane1_3600STDY6184178_CAAGGAGC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184179_TGGTTGAC_L001_17592_1 lane1_3600STDY6184180_ACCTGCTG_L001_17592_1 
#>                                       "031"                                      "0221"

show/hide code output

get_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 5150))
#> lane1_3600STDY6077864_ATCACGTT_L001_15986_1 lane1_3600STDY6077865_CGATGTTT_L001_15986_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6077866_TTAGGCAT_L001_15986_1 lane1_3600STDY6077867_TGACCACT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077868_ACAGTGGT_L001_15986_1 lane1_3600STDY6077869_GCCAATGT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077870_CAGATCTG_L001_15986_1 lane1_3600STDY6077871_ACTTGATG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077872_GATCAGCG_L001_15986_1 lane1_3600STDY6077873_TAGCTTGT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077874_GGCTACAG_L001_15986_1 lane1_3600STDY6077875_CTTGTACT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077876_TGGTTGTT_L001_15986_1 lane1_3600STDY6077877_TCTCGGTT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077878_TAAGCGTT_L001_15986_1 lane1_3600STDY6077879_TCCGTCTT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077880_TGTACCTT_L001_15986_1 lane1_3600STDY6077881_TTCTGTGT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077882_TCTGCTGT_L001_15986_1 lane1_3600STDY6077883_TTGGAGGT_L001_15986_1 
#>                                      "0121"                                      "0221" 
#> lane1_3600STDY6077884_TCGAGCGT_L001_15986_1 lane1_3600STDY6077885_TGATACGT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077886_TGCATAGT_L001_15986_1 lane1_3600STDY6077887_TTGACTCT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077888_TGCGATCT_L001_15986_1 lane1_3600STDY6077889_TTCCTGCT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077890_TAGTGACT_L001_15986_1 lane1_3600STDY6077891_TACAGGAT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077892_TCCTCAAT_L001_15986_1 lane1_3600STDY6077893_TGTGGTTG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077894_TAGTCTTG_L001_15986_1 lane1_3600STDY6077895_TTCCATTG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077896_TCGAAGTG_L001_15986_1 lane1_3600STDY6077897_TAACGCTG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077898_TTGGTATG_L001_15986_1 lane1_3600STDY6077899_TGAACTGG_L001_15986_1 
#>                                      "0121"                                      "0221" 
#> lane1_3600STDY6077900_TACTTCGG_L001_15986_1 lane1_3600STDY6077901_TCTCACGG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077902_TCAGGAGG_L001_15986_1 lane1_3600STDY6077903_TAAGTTCG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077904_TCCAGTCG_L001_15986_1 lane1_3600STDY6077905_TGTATGCG_L001_15986_1 
#>                                      "0221"                                      "0121" 
#> lane1_3600STDY6077906_TCATTGAG_L001_15986_1 lane1_3600STDY6077907_TGGCTCAG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077908_TATGCCAG_L001_15986_1 lane1_3600STDY6077909_TCAGATTC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077910_TACTAGTC_L001_15986_1 lane1_3600STDY6077911_TTCAGCTC_L001_15986_1 
#>                                      "0121"                                      "0221" 
#> lane1_3600STDY6077912_TGTCTATC_L001_15986_1 lane1_3600STDY6077913_TATGTGGC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077914_TTACTCGC_L001_15986_1 lane1_3600STDY6077915_TCGTTAGC_L001_15986_1 
#>                                      "0221"                                      "0121" 
#> lane1_3600STDY6077916_TACCGAGC_L001_15986_1 lane1_3600STDY6077917_TGTTCTCC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077918_TTCGCACC_L001_15986_1 lane1_3600STDY6077919_TTGCGTAC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077920_TCTACGAC_L001_15986_1 lane1_3600STDY6077921_TGACAGAC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077922_TAGAACAC_L001_15986_1 lane1_3600STDY6077923_TCATCCTA_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077924_TGCTGATA_L001_15986_1 lane1_3600STDY6077925_TAGACGGA_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077926_TGTGAAGA_L001_15986_1 lane1_3600STDY6077927_TCTCTTCA_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077928_TTGTTCCA_L001_15986_1 lane1_3600STDY6077929_TGAAGCCA_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077930_TACCACCA_L001_15986_1 lane1_3600STDY6077931_TGCGTGAA_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077932_GGTGAGTT_L001_15986_1 lane1_3600STDY6077933_GATCTCTT_L001_15986_1 
#>                                      "0121"                                      "0221" 
#> lane1_3600STDY6077934_GTGTCCTT_L001_15986_1 lane1_3600STDY6077935_GACGGATT_L001_15986_1 
#>                                      "0221"                                      "0121" 
#> lane1_3600STDY6077936_GCAACATT_L001_15986_1 lane1_3600STDY6077937_GGTCGTGT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077938_GAATCTGT_L001_15986_1 lane1_3600STDY6077939_GTACATCT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077940_GAGGTGCT_L001_15986_1 lane1_3600STDY6077941_GCATGGCT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077942_GTTAGCCT_L001_15986_1 lane1_3600STDY6077943_GTCGCTAT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077944_GGAATGAT_L001_15986_1 lane1_3600STDY6077945_GAGCCAAT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077946_GCTCCTTG_L001_15986_1 lane1_3600STDY6077947_GTAAGGTG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077948_GAGGATGG_L001_15986_1 lane1_3600STDY6077949_GTTGTCGG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077950_GGATTAGG_L001_15986_1 lane1_3600STDY6077951_GATAGAGG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077952_GTGTGTCG_L001_15986_1 lane1_3600STDY6077953_GCAATCCG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077954_GACCTTAG_L001_15986_1 lane1_3600STDY6077955_GCCTGTTC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077956_GCACTGTC_L001_15986_1 lane1_3600STDY6077957_GCTAACTC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077958_GATTCATC_L001_15986_1 lane1_3600STDY6077959_GTCTTGGC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane3_3600STDY6077960_ATCACGTT_L003_15987_1 lane3_3600STDY6077961_CGATGTTT_L003_15987_1 
#>                                      "0221"                                      "0221" 
#> lane3_3600STDY6077962_TTAGGCAT_L003_15987_1 lane3_3600STDY6077963_TGACCACT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077964_ACAGTGGT_L003_15987_1 lane3_3600STDY6077965_GCCAATGT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077966_CAGATCTG_L003_15987_1 lane3_3600STDY6077967_ACTTGATG_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077968_GATCAGCG_L003_15987_1 lane3_3600STDY6077969_TAGCTTGT_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6077970_GGCTACAG_L003_15987_1 lane3_3600STDY6077971_CTTGTACT_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6077972_TGGTTGTT_L003_15987_1 lane3_3600STDY6077973_TCTCGGTT_L003_15987_1 
#>                                      "0123"                                      "0122" 
#> lane3_3600STDY6077974_TAAGCGTT_L003_15987_1 lane3_3600STDY6077975_TCCGTCTT_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6077976_TGTACCTT_L003_15987_1 lane3_3600STDY6077977_TTCTGTGT_L003_15987_1 
#>                                      "0123"                                      "0122" 
#> lane3_3600STDY6077978_TCTGCTGT_L003_15987_1 lane3_3600STDY6077979_TTGGAGGT_L003_15987_1 
#>                                      "0224"                                      "0122" 
#> lane3_3600STDY6077980_TCGAGCGT_L003_15987_1 lane3_3600STDY6077981_TGATACGT_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6077982_TGCATAGT_L003_15987_1 lane3_3600STDY6077983_TTGACTCT_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6077984_TGCGATCT_L003_15987_1 lane3_3600STDY6077985_TTCCTGCT_L003_15987_1 
#>                                      "0123"                                      "0122" 
#> lane3_3600STDY6077986_TAGTGACT_L003_15987_1 lane3_3600STDY6077987_TACAGGAT_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6077988_TCCTCAAT_L003_15987_1 lane3_3600STDY6077989_TGTGGTTG_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077990_TAGTCTTG_L003_15987_1 lane3_3600STDY6077991_TTCCATTG_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6077992_TCGAAGTG_L003_15987_1 lane3_3600STDY6077993_TAACGCTG_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6077994_TTGGTATG_L003_15987_1 lane3_3600STDY6077995_TGAACTGG_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6077996_TACTTCGG_L003_15987_1 lane3_3600STDY6077997_TCTCACGG_L003_15987_1 
#>                                      "0122"                                      "0224" 
#> lane3_3600STDY6077998_TCAGGAGG_L003_15987_1 lane3_3600STDY6077999_TAAGTTCG_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078000_TCCAGTCG_L003_15987_1 lane3_3600STDY6078001_TGTATGCG_L003_15987_1 
#>                                      "0122"                                      "0221" 
#> lane3_3600STDY6078002_TCATTGAG_L003_15987_1 lane3_3600STDY6078003_TGGCTCAG_L003_15987_1 
#>                                      "0342"                                      "0122" 
#> lane3_3600STDY6078004_TATGCCAG_L003_15987_1 lane3_3600STDY6078005_TCAGATTC_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6078006_TACTAGTC_L003_15987_1 lane3_3600STDY6078007_TTCAGCTC_L003_15987_1 
#>                                      "0123"                                      "0122" 
#> lane3_3600STDY6078008_TGTCTATC_L003_15987_1 lane3_3600STDY6078009_TATGTGGC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078010_TTACTCGC_L003_15987_1 lane3_3600STDY6078011_TCGTTAGC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078012_TACCGAGC_L003_15987_1 lane3_3600STDY6078013_TGTTCTCC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078014_TTCGCACC_L003_15987_1 lane3_3600STDY6078015_TTGCGTAC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078016_TCTACGAC_L003_15987_1 lane3_3600STDY6078017_TGACAGAC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078018_TAGAACAC_L003_15987_1 lane3_3600STDY6078019_TCATCCTA_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078020_TGCTGATA_L003_15987_1 lane3_3600STDY6078021_TAGACGGA_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078022_TGTGAAGA_L003_15987_1 lane3_3600STDY6078023_TCTCTTCA_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078024_TTGTTCCA_L003_15987_1 lane3_3600STDY6078025_TGAAGCCA_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078026_TACCACCA_L003_15987_1 lane3_3600STDY6078027_TGCGTGAA_L003_15987_1 
#>                                      "0123"                                      "0221" 
#> lane3_3600STDY6078028_GGTGAGTT_L003_15987_1 lane3_3600STDY6078029_GATCTCTT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078030_GTGTCCTT_L003_15987_1 lane3_3600STDY6078031_GACGGATT_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078032_GCAACATT_L003_15987_1 lane3_3600STDY6078033_GGTCGTGT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078034_GAATCTGT_L003_15987_1 lane3_3600STDY6078035_GTACATCT_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6078036_GAGGTGCT_L003_15987_1 lane3_3600STDY6078037_GCATGGCT_L003_15987_1 
#>                                      "0123"                                      "0122" 
#> lane3_3600STDY6078038_GTTAGCCT_L003_15987_1 lane3_3600STDY6078039_GTCGCTAT_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078040_GGAATGAT_L003_15987_1 lane3_3600STDY6078041_GAGCCAAT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078042_GCTCCTTG_L003_15987_1 lane3_3600STDY6078043_GTAAGGTG_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078044_GAGGATGG_L003_15987_1 lane3_3600STDY6078045_GTTGTCGG_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078046_GGATTAGG_L003_15987_1 lane3_3600STDY6078047_GATAGAGG_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078048_GTGTGTCG_L003_15987_1 lane3_3600STDY6078049_GCAATCCG_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078050_GACCTTAG_L003_15987_1 lane3_3600STDY6078051_GCCTGTTC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078052_GCACTGTC_L003_15987_1 lane3_3600STDY6078053_GCTAACTC_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6078054_GATTCATC_L003_15987_1 lane3_3600STDY6078055_GTCTTGGC_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane1_3600STDY6167693_ATCACGTT_L001_17236_1 lane1_3600STDY6167694_CGATGTTT_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167695_TTAGGCAT_L001_17236_1 lane1_3600STDY6167696_TGACCACT_L001_17236_1 
#>                                      "0342"                                       "011" 
#> lane1_3600STDY6167697_ACAGTGGT_L001_17236_1 lane1_3600STDY6167698_GCCAATGT_L001_17236_1 
#>                                      "0224"                                       "011" 
#> lane1_3600STDY6167699_CAGATCTG_L001_17236_1 lane1_3600STDY6167700_ACTTGATG_L001_17236_1 
#>                                       "011"                                      "0221" 
#> lane1_3600STDY6167701_GATCAGCG_L001_17236_1 lane1_3600STDY6167702_TAGCTTGT_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167703_GGCTACAG_L001_17236_1 lane1_3600STDY6167704_CTTGTACT_L001_17236_1 
#>                                       "014"                                      "0342" 
#> lane1_3600STDY6167705_TGGTTGTT_L001_17236_1 lane1_3600STDY6167706_TCTCGGTT_L001_17236_1 
#>                                       "014"                                      "0221" 
#> lane1_3600STDY6167707_TAAGCGTT_L001_17236_1 lane1_3600STDY6167708_TCCGTCTT_L001_17236_1 
#>                                      "0221"                                       "013" 
#> lane1_3600STDY6167709_TGTACCTT_L001_17236_1 lane1_3600STDY6167710_TTCTGTGT_L001_17236_1 
#>                                       "011"                                      "0221" 
#> lane1_3600STDY6167711_TCTGCTGT_L001_17236_1 lane1_3600STDY6167712_TTGGAGGT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167713_TCGAGCGT_L001_17236_1 lane1_3600STDY6167714_TGATACGT_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167715_TGCATAGT_L001_17236_1 lane1_3600STDY6167716_TTGACTCT_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167717_TGCGATCT_L001_17236_1 lane1_3600STDY6167718_TTCCTGCT_L001_17236_1 
#>                                       "013"                                      "0221" 
#> lane1_3600STDY6167719_TAGTGACT_L001_17236_1 lane1_3600STDY6167720_TACAGGAT_L001_17236_1 
#>                                      "0342"                                      "0342" 
#> lane1_3600STDY6167721_TCCTCAAT_L001_17236_1 lane1_3600STDY6167722_TGTGGTTG_L001_17236_1 
#>                                      "0342"                                       "011" 
#> lane1_3600STDY6167723_TAGTCTTG_L001_17236_1 lane1_3600STDY6167724_TTCCATTG_L001_17236_1 
#>                                       "011"                                      "0221" 
#> lane1_3600STDY6167725_TCGAAGTG_L001_17236_1 lane1_3600STDY6167726_TAACGCTG_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167727_TTGGTATG_L001_17236_1 lane1_3600STDY6167728_TGAACTGG_L001_17236_1 
#>                                       "013"                                      "0121" 
#> lane1_3600STDY6167729_TACTTCGG_L001_17236_1 lane1_3600STDY6167730_TCTCACGG_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167731_TCAGGAGG_L001_17236_1 lane1_3600STDY6167732_TAAGTTCG_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167733_TCCAGTCG_L001_17236_1 lane1_3600STDY6167734_TGTATGCG_L001_17236_1 
#>                                       "011"                                      "0221" 
#> lane1_3600STDY6167735_TCATTGAG_L001_17236_1 lane1_3600STDY6167736_TGGCTCAG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167737_TATGCCAG_L001_17236_1 lane1_3600STDY6167738_TCAGATTC_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167739_TACTAGTC_L001_17236_1 lane1_3600STDY6167740_TTCAGCTC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167741_TGTCTATC_L001_17236_1 lane1_3600STDY6167742_TATGTGGC_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167743_TTACTCGC_L001_17236_1 lane1_3600STDY6167744_TCGTTAGC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167745_TACCGAGC_L001_17236_1 lane1_3600STDY6167746_TGTTCTCC_L001_17236_1 
#>                                      "0342"                                       "011" 
#> lane1_3600STDY6167747_TTCGCACC_L001_17236_1 lane1_3600STDY6167748_TTGCGTAC_L001_17236_1 
#>                                      "0342"                                       "011" 
#> lane1_3600STDY6167749_TCTACGAC_L001_17236_1 lane1_3600STDY6167750_TGACAGAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167751_TAGAACAC_L001_17236_1 lane1_3600STDY6167752_TCATCCTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167753_TGCTGATA_L001_17236_1 lane1_3600STDY6167754_TAGACGGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167755_TGTGAAGA_L001_17236_1 lane1_3600STDY6167756_TCTCTTCA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167757_TTGTTCCA_L001_17236_1 lane1_3600STDY6167758_TGAAGCCA_L001_17236_1 
#>                                       "011"                                      "0221" 
#> lane1_3600STDY6167759_TACCACCA_L001_17236_1 lane1_3600STDY6167760_TGCGTGAA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167761_GGTGAGTT_L001_17236_1 lane1_3600STDY6167762_GATCTCTT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167763_GTGTCCTT_L001_17236_1 lane1_3600STDY6167764_GACGGATT_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167765_GCAACATT_L001_17236_1 lane1_3600STDY6167766_GGTCGTGT_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167767_GAATCTGT_L001_17236_1 lane1_3600STDY6167768_GTACATCT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167769_GAGGTGCT_L001_17236_1 lane1_3600STDY6167770_GCATGGCT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167771_GTTAGCCT_L001_17236_1 lane1_3600STDY6167772_GTCGCTAT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167773_GGAATGAT_L001_17236_1 lane1_3600STDY6167774_GAGCCAAT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167775_GCTCCTTG_L001_17236_1 lane1_3600STDY6167776_GTAAGGTG_L001_17236_1 
#>                                       "011"                                      "0221" 
#> lane1_3600STDY6167777_GAGGATGG_L001_17236_1 lane1_3600STDY6167778_GTTGTCGG_L001_17236_1 
#>                                       "011"                                      "0221" 
#> lane1_3600STDY6167779_GGATTAGG_L001_17236_1 lane1_3600STDY6167780_GATAGAGG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167781_GTGTGTCG_L001_17236_1 lane1_3600STDY6167782_GCAATCCG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167783_GACCTTAG_L001_17236_1 lane1_3600STDY6167784_GCCTGTTC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167785_GCACTGTC_L001_17236_1 lane1_3600STDY6167786_GCTAACTC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167787_GATTCATC_L001_17236_1 lane1_3600STDY6167788_GTCTTGGC_L001_17236_1 
#>                                       "011"                                      "0221" 
#> lane1_3600STDY6167789_GTAGAAGC_L001_17236_1 lane1_3600STDY6167790_GATGGTCC_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167791_GTGCTACC_L001_17236_1 lane1_3600STDY6167792_GCGATTAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167793_GGTTGGAC_L001_17236_1 lane1_3600STDY6167794_GGCACAAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167795_GACACTTA_L001_17236_1 lane1_3600STDY6167796_GTGCAGTA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167797_GGAGTCTA_L001_17236_1 lane1_3600STDY6167798_GCTATGGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167799_GAGTGCGA_L001_17236_1 lane1_3600STDY6167800_GTAACCGA_L001_17236_1 
#>                                      "0342"                                       "011" 
#> lane1_3600STDY6167801_GGCAAGCA_L001_17236_1 lane1_3600STDY6167802_GCCTTACA_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167803_GAACGACA_L001_17236_1 lane1_3600STDY6167804_GCAGGTAA_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167805_GCGTCGAA_L001_17236_1 lane1_3600STDY6167806_CGTTCGGT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167807_CACCAGGT_L001_17236_1 lane1_3600STDY6167808_CTGCGAGT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167809_CCGTATCT_L001_17236_1 lane1_3600STDY6167810_CGCTTCCT_L001_17236_1 
#>                                       "011"                                      "0222" 
#> lane1_3600STDY6167811_CAAGACCT_L001_17236_1 lane1_3600STDY6167812_CACACACT_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167813_CCTAGTAT_L001_17236_1 lane1_3600STDY6167814_CCACCGAT_L001_17236_1 
#>                                      "0221"                                       "011" 
#> lane1_3600STDY6167815_CTTCACAT_L001_17236_1 lane1_3600STDY6167816_CTATCATG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167817_CATGAATG_L001_17236_1 lane1_3600STDY6167818_CCACTTGG_L001_17236_1 
#>                                      "0342"                                       "011" 
#> lane1_3600STDY6167819_CTGTACGG_L001_17236_1 lane1_3600STDY6167820_CTAGATAG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167821_CACTCGAG_L001_17236_1 lane1_3600STDY6167822_CCGACAAG_L001_17236_1 
#>                                      "0342"                                       "013" 
#> lane1_3600STDY6167823_CTTGCTTC_L001_17236_1 lane1_3600STDY6167824_CATAGGTC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167825_CACATTGC_L001_17236_1 lane1_3600STDY6167826_CGCTAAGC_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167827_CAACCTCC_L001_17236_1 lane1_3600STDY6167828_CAGCTGAC_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167829_CTCAAGAC_L001_17236_1 lane1_3600STDY6167830_CGTGTCAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167831_CCATGCAC_L001_17236_1 lane1_3600STDY6167832_CGTTACTA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167833_CAAGTAGA_L001_17236_1 lane1_3600STDY6167834_CTCTCTCA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167835_CGACTGCA_L001_17236_1 lane1_3600STDY6167836_CCTGAGCA_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167837_CAGGCTAA_L001_17236_1 lane1_3600STDY6167838_CGGAGGAA_L001_17236_1 
#>                                       "014"                                       "011" 
#> lane1_3600STDY6167839_AGGAGATT_L001_17236_1 lane1_3600STDY6167840_AGGCAGCT_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167841_ACGTTCAT_L001_17236_1 lane1_3600STDY6167842_AACGTGTG_L001_17236_1 
#>                                      "0342"                                       "013" 
#> lane1_3600STDY6167843_AGACCGTG_L001_17236_1 lane1_3600STDY6167844_ACCTCTGG_L001_17236_1 
#>                                      "0342"                                      "0221" 
#> lane1_3600STDY6167845_ATCCTAGG_L001_17236_1 lane1_3600STDY6167846_ATCAACCG_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167847_AGGTCACG_L001_17236_1 lane1_3600STDY6167848_ACTGTTAG_L001_17236_1 
#>                                      "0221"                                       "013" 
#> lane1_3600STDY6167849_AAGAGTAG_L001_17236_1 lane1_3600STDY6167850_ATTCGGAG_L001_17236_1 
#>                                       "013"                                       "014" 
#> lane1_3600STDY6167851_ACGCAATC_L001_17236_1 lane1_3600STDY6167852_ACAAGTGC_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167853_ATGGATCC_L001_17236_1 lane1_3600STDY6167854_AGAGGACC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167855_ATCTCCAC_L001_17236_1 lane1_3600STDY6167856_ATTGGCTA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167857_AATCCTGA_L001_17236_1 lane1_3600STDY6167858_AGGATTCA_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6167859_AACTGGCA_L001_17236_1 lane1_3600STDY6167860_ACAACGCA_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167861_CGGAAACA_L001_17236_1 lane1_3600STDY6167862_AATGAATT_L001_17236_1 
#>                                      "0221"                                       "014" 
#> lane1_3600STDY6167863_TAGGACCC_L001_17236_1 lane1_3600STDY6167864_TCTCAGTG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167865_CATGGGAA_L001_17236_1 lane1_3600STDY6167866_CCTAAGAT_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167867_CTCAGATA_L001_17236_1 lane1_3600STDY6167868_CCCATAGG_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167869_GCTATGAC_L001_17236_1 lane1_3600STDY6167870_GCTGTGAA_L001_17236_1 
#>                                       "011"                                      "0221" 
#> lane1_3600STDY6167871_ACCTTCAA_L001_17236_1 lane1_3600STDY6167872_ACAAAGCC_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6167873_CAAAACCG_L001_17236_1 lane1_3600STDY6167874_GCTGGACA_L001_17236_1 
#>                                      "0221"                                       "014" 
#> lane1_3600STDY6167875_AAGTCGTA_L001_17236_1 lane1_3600STDY6167876_CATCCGTA_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167877_TTGTGTCT_L001_17236_1 lane1_3600STDY6167878_TGCTCTAG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167879_ACCCAACA_L001_17236_1 lane1_3600STDY6167880_CGATCTGA_L001_17236_1 
#>                                      "0221"                                       "011" 
#> lane1_3600STDY6167881_GTTCCACG_L001_17236_1 lane1_3600STDY6167882_ACTCTTTC_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167883_TATTGGAG_L001_17236_1 lane1_3600STDY6167884_TAAACATA_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6167885_GTAAGATA_L001_17236_1 lane1_3600STDY6167886_TACCGCAA_L001_17236_1 
#>                                      "0342"                                       "013" 
#> lane1_3600STDY6167887_TATCTCCT_L001_17236_1 lane1_3600STDY6167888_TGTCATCT_L001_17236_1 
#>                                      "0342"                                       "011" 
#> lane1_3600STDY6167889_ATAGCTCT_L001_17236_1 lane1_3600STDY6167890_AGTCCAAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167891_TTTGGGCA_L001_17236_1 lane1_3600STDY6167892_TCTGACGC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167893_TGTCGACT_L001_17236_1 lane1_3600STDY6167894_GTCACGTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167895_TTGAGCGA_L001_17236_1 lane1_3600STDY6167896_GAGACATA_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167897_GTCAAGCT_L001_17236_1 lane1_3600STDY6167898_AGCAAGTT_L001_17236_1 
#>                                       "023"                                      "0342" 
#> lane1_3600STDY6167899_GACGCTCA_L001_17236_1 lane1_3600STDY6167900_ACGGCAGC_L001_17236_1 
#>                                       "011"                                      "0342" 
#> lane1_3600STDY6167901_AGAACTGA_L001_17236_1 lane1_3600STDY6167902_CGCCTTTG_L001_17236_1 
#>                                      "0342"                                       "011" 
#> lane1_3600STDY6167903_TAAGGTCA_L001_17236_1 lane1_3600STDY6167904_ACGTTGGC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167905_CCAGCTTA_L001_17236_1 lane1_3600STDY6167906_GAATCCTA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167907_ACTTCGTA_L001_17236_1 lane1_3600STDY6167908_TAGTCGGT_L001_17236_1 
#>                                       "013"                                      "0221" 
#> lane1_3600STDY6167909_CGCACGAG_L001_17236_1 lane1_3600STDY6167910_ACGTACTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167911_AGCGCCAA_L001_17236_1 lane1_3600STDY6167912_GCCTGCCC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167913_AGGACGAT_L001_17236_1 lane1_3600STDY6167914_CTTGACCG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167915_AGGTCTAA_L001_17236_1 lane1_3600STDY6167916_CGAGATCC_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167917_ATTAGCGG_L001_17236_1 lane1_3600STDY6167918_GCGCTGAT_L001_17236_1 
#>                                       "011"                                      "0221" 
#> lane1_3600STDY6167919_TGCTGAAC_L001_17236_1 lane1_3600STDY6167920_GAGGGCAG_L001_17236_1 
#>                                       "014"                                      "0221" 
#> lane1_3600STDY6167921_GTTTTCAC_L001_17236_1 lane1_3600STDY6167922_GAGATGCC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167923_TTGAGAAG_L001_17236_1 lane1_3600STDY6167924_GCATCCGG_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167925_GTCACCAG_L001_17236_1 lane1_3600STDY6167926_GAGGTCGC_L001_17236_1 
#>                                       "011"                                      "0342" 
#> lane1_3600STDY6167927_AAGGGGTA_L001_17236_1 lane1_3600STDY6167928_TTTTACGT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167929_TTCCTACA_L001_17236_1 lane1_3600STDY6167930_AGTGTAGT_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167931_GTGGCCAA_L001_17236_1 lane1_3600STDY6167932_AAATACTC_L001_17236_1 
#>                                       "013"                                       "014" 
#> lane1_3600STDY6167933_CACCCGTC_L001_17236_1 lane1_3600STDY6167934_TCGTGGTT_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167935_ACTTGGGG_L001_17236_1 lane1_3600STDY6167936_GGCTGCTT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167937_CAGGGTCG_L001_17236_1 lane1_3600STDY6167938_CTCGTCGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167939_TCTACAGT_L001_17236_1 lane1_3600STDY6167940_CTTCTAGA_L001_17236_1 
#>                                       "011"                                      "0342" 
#> lane1_3600STDY6167941_AACGGCTT_L001_17236_1 lane1_3600STDY6167942_ATAAGACT_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167943_GTTTTTCG_L001_17236_1 lane1_3600STDY6167944_ATTGGTAT_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167945_CGCCAGTA_L001_17236_1 lane1_3600STDY6167946_AAGCCGAA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167947_TGACCCAC_L001_17236_1 lane1_3600STDY6167948_ATTGCACA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167949_CTTTTGAT_L001_17236_1 lane1_3600STDY6167950_TAGCGAGA_L001_17236_1 
#>                                       "011"                                      "0221" 
#> lane1_3600STDY6167951_TTCGCAGG_L001_17236_1 lane1_3600STDY6167952_TAGTTATT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167953_TCCTCCGA_L001_17236_1 lane1_3600STDY6167954_GCGGGTCT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167955_GATTCTAT_L001_17236_1 lane1_3600STDY6167956_ATGCAAAG_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167957_GTCTGAGG_L001_17236_1 lane1_3600STDY6167958_TCTGGCGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167959_AATTTGCG_L001_17236_1 lane1_3600STDY6167960_TGGGTTGG_L001_17236_1 
#>                                       "011"                                      "0342" 
#> lane1_3600STDY6167961_AGTTGAAA_L001_17236_1 lane1_3600STDY6167962_GACCGGAA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167963_GATCGAAC_L001_17236_1 lane1_3600STDY6167964_GTATAGGG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167965_GGTAAGAG_L001_17236_1 lane1_3600STDY6167966_AGTCCGAT_L001_17236_1 
#>                                      "0221"                                       "011" 
#> lane1_3600STDY6167967_ATACAGGC_L001_17236_1 lane1_3600STDY6167968_TGAGACTC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167969_ACTCAGGA_L001_17236_1 lane1_3600STDY6167970_GTGTCTGA_L001_17236_1 
#>                                       "011"                                      "0342" 
#> lane1_3600STDY6167971_CTTGAATC_L001_17236_1 lane1_3600STDY6167972_CCGCATGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167973_AAGTAACA_L001_17236_1 lane1_3600STDY6167974_GTGGTACT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167975_AGCTGTGC_L001_17236_1 lane1_3600STDY6167976_TTACCTTC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167977_TCCGGGTA_L001_17236_1 lane1_3600STDY6167978_CTACGTAA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167979_TCGGACCG_L001_17236_1 lane1_3600STDY6167980_ATGCGTCG_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167981_TTCTTAGC_L001_17236_1 lane1_3600STDY6167982_TGAGTAAG_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167983_AAGTGATA_L001_17236_1 lane1_3600STDY6167984_TCGATGCG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167985_TATTCTGG_L001_17236_1 lane1_3600STDY6167986_AGCCGTGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167987_AAGCCTTC_L001_17236_1 lane1_3600STDY6167988_AGGTATCC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167989_AGGATCTC_L001_17236_1 lane1_3600STDY6167990_CTGTTTGA_L001_17236_1 
#>                                      "0221"                                       "011" 
#> lane1_3600STDY6167991_GGAATTTC_L001_17236_1 lane1_3600STDY6167992_TTGGAGCA_L001_17236_1 
#>                                       "013"                                      "0342" 
#> lane1_3600STDY6167993_AAGGTCTG_L001_17236_1 lane1_3600STDY6167994_AATTAGGC_L001_17236_1 
#>                                      "0342"                                       "011" 
#> lane1_3600STDY6167995_AATCGGGT_L001_17236_1 lane1_3600STDY6167996_AGGTAGAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167997_CTTATTCC_L001_17236_1 lane1_3600STDY6167998_CAGGCTCT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167999_AAAGCACG_L001_17236_1 lane1_3600STDY6168000_GTATACAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168001_GGACATAT_L001_17236_1 lane1_3600STDY6168002_CGGTTGGG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168003_GTCCGTGA_L001_17236_1 lane1_3600STDY6168004_GCCGAACC_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6168005_ACTTTACT_L001_17236_1 lane1_3600STDY6168006_GGGTCCAT_L001_17236_1 
#>                                      "0342"                                       "013" 
#> lane1_3600STDY6168007_ATAACTAG_L001_17236_1 lane1_3600STDY6168008_AATAGAGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168009_TCACCATT_L001_17236_1 lane1_3600STDY6168010_CGCCTGAT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168011_GCGTGAAC_L001_17236_1 lane1_3600STDY6168012_TAAGGGTG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168013_GGTGTCGA_L001_17236_1 lane1_3600STDY6168014_CCGTTAGG_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6168015_TGGCAAAA_L001_17236_1 lane1_3600STDY6168016_CCTACCCG_L001_17236_1 
#>                                       "011"                                      "0222" 
#> lane1_3600STDY6168017_AACAGCGC_L001_17236_1 lane1_3600STDY6168018_TATACATC_L001_17236_1 
#>                                       "013"                                      "0221" 
#> lane1_3600STDY6168019_AAGCGACT_L001_17236_1 lane1_3600STDY6168020_GAAGCGCA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168021_ACCTCTAC_L001_17236_1 lane1_3600STDY6168022_GATTGCGT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168023_GCTGGTTG_L001_17236_1 lane1_3600STDY6168024_ATCGTCCT_L001_17236_1 
#>                                      "0221"                                       "011" 
#> lane1_3600STDY6168025_GGACACGG_L001_17236_1 lane1_3600STDY6168026_CGCACCTA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168027_CTTCGGCT_L001_17236_1 lane1_3600STDY6168028_CGAATCGA_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6168029_TAACAACT_L001_17236_1 lane1_3600STDY6168030_AGCTCTTT_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168031_TAATCCCT_L001_17236_1 lane1_3600STDY6168032_AGGACACT_L001_17236_1 
#>                                       "011"                                      "0342" 
#> lane1_3600STDY6168033_TTACACTA_L001_17236_1 lane1_3600STDY6168034_AAACATCA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168035_CCATAGCT_L001_17236_1 lane1_3600STDY6168036_GTTATGGC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168037_ATCCCCTA_L001_17236_1 lane1_3600STDY6168038_CATACTAC_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6168039_CAATTGTT_L001_17236_1 lane1_3600STDY6168040_AAACCCGT_L001_17236_1 
#>                                       "014"                                      "0221" 
#> lane1_3600STDY6168041_CAGATTTC_L001_17236_1 lane1_3600STDY6168042_GCGTAGGT_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6168043_GGCATTCG_L001_17236_1 lane1_3600STDY6168044_TGGGGCTT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168045_CTGACTAC_L001_17236_1 lane1_3600STDY6168046_AACTTTTA_L001_17236_1 
#>                                       "011"                                      "0342" 
#> lane1_3600STDY6168047_AGGGATTC_L001_17236_1 lane1_3600STDY6168048_CCGAGTAG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168049_GGGGACTA_L001_17236_1 lane1_3600STDY6168050_GGAGTTGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168051_AGCTCATC_L001_17236_1 lane1_3600STDY6168052_TAATCAAC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168053_ACTGGTCG_L001_17236_1 lane1_3600STDY6168054_GACGATTG_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168055_AGCGATGA_L001_17236_1 lane1_3600STDY6168056_GAAGAGAT_L001_17236_1 
#>                                       "011"                                      "0342" 
#> lane1_3600STDY6168057_CGTATGCA_L001_17236_1 lane1_3600STDY6168058_CACGTGCG_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6168059_GCTTAAAC_L001_17236_1 lane1_3600STDY6168060_GTTCCGCA_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6168061_GTATCGTC_L001_17236_1 lane1_3600STDY6168062_GTCCTCAC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168063_GTACGGAC_L001_17236_1 lane1_3600STDY6168064_CATTTTGC_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6168065_TCCTCTCT_L001_17236_1 lane1_3600STDY6168066_AGCAACGA_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6168067_ACAGAAGA_L001_17236_1 lane1_3600STDY6168068_CGACCCTT_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6168069_CTGCCTAG_L001_17236_1 lane1_3600STDY6168070_GAGCGCAT_L001_17236_1 
#>                                      "0221"                                       "013" 
#> lane1_3600STDY6168071_AACTTATC_L001_17236_1 lane1_3600STDY6168072_CCGATGTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168073_TTACTACC_L001_17236_1 lane1_3600STDY6168074_CAAGGAGC_L001_17236_1 
#>                                       "013"                                       "014" 
#> lane1_3600STDY6168075_TGGTTGAC_L001_17236_1 lane1_3600STDY6168076_ACCTGCTG_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane4_3600STDY6184181_ATCACGTT_L004_17480_1 lane4_3600STDY6184182_CGATGTTT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184183_TTAGGCAT_L004_17480_1 lane4_3600STDY6184184_TGACCACT_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184185_ACAGTGGT_L004_17480_1 lane4_3600STDY6184186_GCCAATGT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184187_CAGATCTG_L004_17480_1 lane4_3600STDY6184188_ACTTGATG_L004_17480_1 
#>                                       "032"                                       "021" 
#> lane4_3600STDY6184189_GATCAGCG_L004_17480_1 lane4_3600STDY6184190_TAGCTTGT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184191_GGCTACAG_L004_17480_1 lane4_3600STDY6184192_CTTGTACT_L004_17480_1 
#>                                       "032"                                       "021" 
#> lane4_3600STDY6184193_TGGTTGTT_L004_17480_1 lane4_3600STDY6184194_TCTCGGTT_L004_17480_1 
#>                                       "032"                                       "031" 
#> lane4_3600STDY6184195_TAAGCGTT_L004_17480_1 lane4_3600STDY6184196_TCCGTCTT_L004_17480_1 
#>                                       "031"                                      "0341" 
#> lane4_3600STDY6184197_TGTACCTT_L004_17480_1 lane4_3600STDY6184198_TTCTGTGT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184199_TCTGCTGT_L004_17480_1 lane4_3600STDY6184200_TTGGAGGT_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184201_TCGAGCGT_L004_17480_1 lane4_3600STDY6184202_TGATACGT_L004_17480_1 
#>                                       "031"                                       "032" 
#> lane4_3600STDY6184203_TGCATAGT_L004_17480_1 lane4_3600STDY6184204_TTGACTCT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184205_TGCGATCT_L004_17480_1 lane4_3600STDY6184206_TTCCTGCT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184207_TAGTGACT_L004_17480_1 lane4_3600STDY6184208_TACAGGAT_L004_17480_1 
#>                                       "032"                                       "021" 
#> lane4_3600STDY6184209_TCCTCAAT_L004_17480_1 lane4_3600STDY6184210_TGTGGTTG_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184211_TAGTCTTG_L004_17480_1 lane4_3600STDY6184212_TTCCATTG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184213_TCGAAGTG_L004_17480_1 lane4_3600STDY6184214_TAACGCTG_L004_17480_1 
#>                                      "0221"                                      "0341" 
#> lane4_3600STDY6184215_TTGGTATG_L004_17480_1 lane4_3600STDY6184216_TGAACTGG_L004_17480_1 
#>                                       "021"                                      "0222" 
#> lane4_3600STDY6184217_TACTTCGG_L004_17480_1 lane4_3600STDY6184218_TCTCACGG_L004_17480_1 
#>                                       "021"                                      "0341" 
#> lane4_3600STDY6184219_TCAGGAGG_L004_17480_1 lane4_3600STDY6184220_TAAGTTCG_L004_17480_1 
#>                                       "021"                                      "0341" 
#> lane4_3600STDY6184221_TCCAGTCG_L004_17480_1 lane4_3600STDY6184222_TGTATGCG_L004_17480_1 
#>                                      "0341"                                       "021" 
#> lane4_3600STDY6184223_TCATTGAG_L004_17480_1 lane4_3600STDY6184224_TGGCTCAG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184225_TATGCCAG_L004_17480_1 lane4_3600STDY6184226_TCAGATTC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184227_TACTAGTC_L004_17480_1 lane4_3600STDY6184228_TTCAGCTC_L004_17480_1 
#>                                       "021"                                       "032" 
#> lane4_3600STDY6184229_TGTCTATC_L004_17480_1 lane4_3600STDY6184230_TATGTGGC_L004_17480_1 
#>                                       "032"                                       "021" 
#> lane4_3600STDY6184231_TTACTCGC_L004_17480_1 lane4_3600STDY6184232_TCGTTAGC_L004_17480_1 
#>                                       "021"                                      "0341" 
#> lane4_3600STDY6184233_TACCGAGC_L004_17480_1 lane4_3600STDY6184234_TGTTCTCC_L004_17480_1 
#>                                      "0341"                                       "021" 
#> lane4_3600STDY6184235_TTCGCACC_L004_17480_1 lane4_3600STDY6184236_TTGCGTAC_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184237_TCTACGAC_L004_17480_1 lane4_3600STDY6184238_TGACAGAC_L004_17480_1 
#>                                       "032"                                       "021" 
#> lane4_3600STDY6184239_TAGAACAC_L004_17480_1 lane4_3600STDY6184240_TCATCCTA_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184241_TGCTGATA_L004_17480_1 lane4_3600STDY6184242_TAGACGGA_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184243_TGTGAAGA_L004_17480_1 lane4_3600STDY6184244_TCTCTTCA_L004_17480_1 
#>                                      "0341"                                       "021" 
#> lane4_3600STDY6184245_TTGTTCCA_L004_17480_1 lane4_3600STDY6184246_TGAAGCCA_L004_17480_1 
#>                                      "0341"                                       "021" 
#> lane4_3600STDY6184247_TACCACCA_L004_17480_1 lane4_3600STDY6184248_TGCGTGAA_L004_17480_1 
#>                                      "0222"                                       "021" 
#> lane4_3600STDY6184249_GGTGAGTT_L004_17480_1 lane4_3600STDY6184250_GATCTCTT_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184251_GTGTCCTT_L004_17480_1 lane4_3600STDY6184252_GACGGATT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184253_GCAACATT_L004_17480_1 lane4_3600STDY6184254_GGTCGTGT_L004_17480_1 
#>                                      "0341"                                       "021" 
#> lane4_3600STDY6184255_GAATCTGT_L004_17480_1 lane4_3600STDY6184256_GTACATCT_L004_17480_1 
#>                                      "0341"                                       "021" 
#> lane4_3600STDY6184257_GAGGTGCT_L004_17480_1 lane4_3600STDY6184258_GCATGGCT_L004_17480_1 
#>                                       "023"                                       "021" 
#> lane4_3600STDY6184259_GTTAGCCT_L004_17480_1 lane4_3600STDY6184260_GTCGCTAT_L004_17480_1 
#>                                       "021"                                      "0222" 
#> lane4_3600STDY6184261_GGAATGAT_L004_17480_1 lane4_3600STDY6184262_GAGCCAAT_L004_17480_1 
#>                                       "023"                                       "021" 
#> lane4_3600STDY6184263_GCTCCTTG_L004_17480_1 lane4_3600STDY6184264_GTAAGGTG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184265_GAGGATGG_L004_17480_1 lane4_3600STDY6184266_GTTGTCGG_L004_17480_1 
#>                                       "021"                                       "032" 
#> lane4_3600STDY6184267_GGATTAGG_L004_17480_1 lane4_3600STDY6184268_GATAGAGG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184269_GTGTGTCG_L004_17480_1 lane4_3600STDY6184270_GCAATCCG_L004_17480_1 
#>                                      "0341"                                       "023" 
#> lane4_3600STDY6184271_GACCTTAG_L004_17480_1 lane4_3600STDY6184272_GCCTGTTC_L004_17480_1 
#>                                      "0222"                                       "021" 
#> lane4_3600STDY6184273_GCACTGTC_L004_17480_1 lane4_3600STDY6184274_GCTAACTC_L004_17480_1 
#>                                       "021"                                      "0341" 
#> lane4_3600STDY6184275_GATTCATC_L004_17480_1 lane4_3600STDY6184276_GTCTTGGC_L004_17480_1 
#>                                       "021"                                       "032" 
#> lane4_3600STDY6184277_GTAGAAGC_L004_17480_1 lane4_3600STDY6184278_GATGGTCC_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184279_GTGCTACC_L004_17480_1 lane4_3600STDY6184280_GCGATTAC_L004_17480_1 
#>                                      "0341"                                       "021" 
#> lane4_3600STDY6184281_GGTTGGAC_L004_17480_1 lane4_3600STDY6184282_GGCACAAC_L004_17480_1 
#>                                      "0341"                                      "0222" 
#> lane4_3600STDY6184283_GACACTTA_L004_17480_1 lane4_3600STDY6184284_GTGCAGTA_L004_17480_1 
#>                                       "021"                                      "0341" 
#> lane4_3600STDY6184285_GGAGTCTA_L004_17480_1 lane4_3600STDY6184286_GCTATGGA_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184287_GAGTGCGA_L004_17480_1 lane4_3600STDY6184288_GTAACCGA_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184289_GGCAAGCA_L004_17480_1 lane4_3600STDY6184290_GCCTTACA_L004_17480_1 
#>                                      "0341"                                       "021" 
#> lane4_3600STDY6184291_GAACGACA_L004_17480_1 lane4_3600STDY6184292_GCAGGTAA_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184293_GCGTCGAA_L004_17480_1 lane4_3600STDY6184294_CGTTCGGT_L004_17480_1 
#>                                      "0341"                                      "0222" 
#> lane4_3600STDY6184295_CACCAGGT_L004_17480_1 lane4_3600STDY6184296_CTGCGAGT_L004_17480_1 
#>                                       "021"                                      "0341" 
#> lane4_3600STDY6184297_CCGTATCT_L004_17480_1 lane4_3600STDY6184298_CGCTTCCT_L004_17480_1 
#>                                       "021"                                      "0341" 
#> lane4_3600STDY6184299_CAAGACCT_L004_17480_1 lane4_3600STDY6184300_CACACACT_L004_17480_1 
#>                                       "021"                                       "032" 
#> lane4_3600STDY6184301_CCTAGTAT_L004_17480_1 lane4_3600STDY6184302_CCACCGAT_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184303_CTTCACAT_L004_17480_1 lane4_3600STDY6184304_CTATCATG_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184305_CATGAATG_L004_17480_1 lane4_3600STDY6184306_CCACTTGG_L004_17480_1 
#>                                      "0341"                                       "021" 
#> lane4_3600STDY6184307_CTGTACGG_L004_17480_1 lane4_3600STDY6184308_CTAGATAG_L004_17480_1 
#>                                       "021"                                      "0341" 
#> lane4_3600STDY6184309_CACTCGAG_L004_17480_1 lane4_3600STDY6184310_CCGACAAG_L004_17480_1 
#>                                      "0222"                                       "032" 
#> lane4_3600STDY6184311_CTTGCTTC_L004_17480_1 lane4_3600STDY6184312_CATAGGTC_L004_17480_1 
#>                                       "021"                                      "0222" 
#> lane4_3600STDY6184313_CACATTGC_L004_17480_1 lane4_3600STDY6184314_CGCTAAGC_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184315_CAACCTCC_L004_17480_1 lane4_3600STDY6184316_CAGCTGAC_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184317_CTCAAGAC_L004_17480_1 lane4_3600STDY6184318_CGTGTCAC_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184319_CCATGCAC_L004_17480_1 lane4_3600STDY6184320_CGTTACTA_L004_17480_1 
#>                                      "0222"                                      "0341" 
#> lane4_3600STDY6184321_CAAGTAGA_L004_17480_1 lane4_3600STDY6184322_CTCTCTCA_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184323_CGACTGCA_L004_17480_1 lane4_3600STDY6184324_CCTGAGCA_L004_17480_1 
#>                                       "021"                                      "0222" 
#> lane4_3600STDY6184325_CAGGCTAA_L004_17480_1 lane4_3600STDY6184326_CGGAGGAA_L004_17480_1 
#>                                       "032"                                       "021" 
#> lane4_3600STDY6184327_AGGAGATT_L004_17480_1 lane4_3600STDY6184328_AGGCAGCT_L004_17480_1 
#>                                      "0341"                                       "021" 
#> lane4_3600STDY6184329_ACGTTCAT_L004_17480_1 lane4_3600STDY6184330_AACGTGTG_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184331_AGACCGTG_L004_17480_1 lane4_3600STDY6184332_ACCTCTGG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184333_ATCCTAGG_L004_17480_1 lane4_3600STDY6184334_ATCAACCG_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184335_AGGTCACG_L004_17480_1 lane4_3600STDY6184336_ACTGTTAG_L004_17480_1 
#>                                       "032"                                       "021" 
#> lane4_3600STDY6184337_AAGAGTAG_L004_17480_1 lane4_3600STDY6184338_ATTCGGAG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184339_ACGCAATC_L004_17480_1 lane4_3600STDY6184340_ACAAGTGC_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184341_ATGGATCC_L004_17480_1 lane4_3600STDY6184342_AGAGGACC_L004_17480_1 
#>                                       "021"                                      "0222" 
#> lane4_3600STDY6184343_ATCTCCAC_L004_17480_1 lane4_3600STDY6184344_ATTGGCTA_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184345_AATCCTGA_L004_17480_1 lane4_3600STDY6184346_AGGATTCA_L004_17480_1 
#>                                       "032"                                      "0222" 
#> lane4_3600STDY6184347_AACTGGCA_L004_17480_1 lane4_3600STDY6184348_ACAACGCA_L004_17480_1 
#>                                      "0221"                                      "0222" 
#> lane4_3600STDY6184349_CGGAAACA_L004_17480_1 lane4_3600STDY6184350_AATGAATT_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184351_TAGGACCC_L004_17480_1 lane4_3600STDY6184352_TCTCAGTG_L004_17480_1 
#>                                      "0341"                                      "0222" 
#> lane4_3600STDY6184353_CATGGGAA_L004_17480_1 lane4_3600STDY6184354_CCTAAGAT_L004_17480_1 
#>                                      "0341"                                       "021" 
#> lane4_3600STDY6184355_CTCAGATA_L004_17480_1 lane4_3600STDY6184356_CCCATAGG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184357_GCTATGAC_L004_17480_1 lane4_3600STDY6184358_GCTGTGAA_L004_17480_1 
#>                                      "0222"                                      "0222" 
#> lane4_3600STDY6184359_ACCTTCAA_L004_17480_1 lane4_3600STDY6184360_ACAAAGCC_L004_17480_1 
#>                                      "0223"                                      "0221" 
#> lane4_3600STDY6184361_CAAAACCG_L004_17480_1 lane4_3600STDY6184362_GCTGGACA_L004_17480_1 
#>                                       "021"                                       "032" 
#> lane4_3600STDY6184363_AAGTCGTA_L004_17480_1 lane4_3600STDY6184364_CATCCGTA_L004_17480_1 
#>                                       "021"                                       "023" 
#> lane4_3600STDY6184365_TTGTGTCT_L004_17480_1 lane4_3600STDY6184366_TGCTCTAG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184367_ACCCAACA_L004_17480_1 lane4_3600STDY6184368_CGATCTGA_L004_17480_1 
#>                                      "0222"                                       "021" 
#> lane4_3600STDY6184369_GTTCCACG_L004_17480_1 lane4_3600STDY6184370_ACTCTTTC_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184371_TATTGGAG_L004_17480_1 lane4_3600STDY6184372_TAAACATA_L004_17480_1 
#>                                      "0221"                                      "0221" 
#> lane4_3600STDY6184373_GTAAGATA_L004_17480_1 lane4_3600STDY6184374_TACCGCAA_L004_17480_1 
#>                                      "0223"                                       "032" 
#> lane4_3600STDY6184375_TATCTCCT_L004_17480_1 lane4_3600STDY6184376_TGTCATCT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184377_ATAGCTCT_L004_17480_1 lane4_3600STDY6184378_AGTCCAAC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184379_TTTGGGCA_L004_17480_1 lane4_3600STDY6184380_TCTGACGC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184381_TGTCGACT_L004_17480_1 lane4_3600STDY6184382_GTCACGTA_L004_17480_1 
#>                                       "032"                                       "031" 
#> lane4_3600STDY6184383_TTGAGCGA_L004_17480_1 lane4_3600STDY6184384_GAGACATA_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184385_GTCAAGCT_L004_17480_1 lane4_3600STDY6184386_AGCAAGTT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184387_GACGCTCA_L004_17480_1 lane4_3600STDY6184388_ACGGCAGC_L004_17480_1 
#>                                      "0341"                                       "021" 
#> lane4_3600STDY6184389_AGAACTGA_L004_17480_1 lane4_3600STDY6184390_CGCCTTTG_L004_17480_1 
#>                                       "021"                                      "0222" 
#> lane4_3600STDY6184391_TAAGGTCA_L004_17480_1 lane4_3600STDY6184392_ACGTTGGC_L004_17480_1 
#>                                      "0222"                                       "021" 
#> lane4_3600STDY6184393_CCAGCTTA_L004_17480_1 lane4_3600STDY6184394_GAATCCTA_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184395_ACTTCGTA_L004_17480_1 lane4_3600STDY6184396_TAGTCGGT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184397_CGCACGAG_L004_17480_1 lane4_3600STDY6184398_ACGTACTA_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184399_AGCGCCAA_L004_17480_1 lane4_3600STDY6184400_GCCTGCCC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184401_AGGACGAT_L004_17480_1 lane4_3600STDY6184402_CTTGACCG_L004_17480_1 
#>                                       "021"                                       "032" 
#> lane4_3600STDY6184403_AGGTCTAA_L004_17480_1 lane4_3600STDY6184404_CGAGATCC_L004_17480_1 
#>                                       "021"                                       "032" 
#> lane4_3600STDY6184405_ATTAGCGG_L004_17480_1 lane4_3600STDY6184406_GCGCTGAT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184407_TGCTGAAC_L004_17480_1 lane4_3600STDY6184408_GAGGGCAG_L004_17480_1 
#>                                       "032"                                       "021" 
#> lane4_3600STDY6184409_GTTTTCAC_L004_17480_1 lane4_3600STDY6184410_GAGATGCC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184411_TTGAGAAG_L004_17480_1 lane4_3600STDY6184412_GCATCCGG_L004_17480_1 
#>                                       "032"                                       "023" 
#> lane4_3600STDY6184413_GTCACCAG_L004_17480_1 lane4_3600STDY6184414_GAGGTCGC_L004_17480_1 
#>                                       "021"                                      "0222" 
#> lane4_3600STDY6184415_AAGGGGTA_L004_17480_1 lane4_3600STDY6184416_TTTTACGT_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184417_TTCCTACA_L004_17480_1 lane4_3600STDY6184418_AGTGTAGT_L004_17480_1 
#>                                       "032"                                       "021" 
#> lane4_3600STDY6184419_GTGGCCAA_L004_17480_1 lane4_3600STDY6184420_AAATACTC_L004_17480_1 
#>                                       "021"                                       "032" 
#> lane4_3600STDY6184421_CACCCGTC_L004_17480_1 lane4_3600STDY6184422_TCGTGGTT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184423_ACTTGGGG_L004_17480_1 lane4_3600STDY6184424_GGCTGCTT_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184425_CAGGGTCG_L004_17480_1 lane4_3600STDY6184426_CTCGTCGA_L004_17480_1 
#>                                       "032"                                       "021" 
#> lane4_3600STDY6184427_TCTACAGT_L004_17480_1 lane4_3600STDY6184428_CTTCTAGA_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184429_AACGGCTT_L004_17480_1 lane4_3600STDY6184430_ATAAGACT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184431_GTTTTTCG_L004_17480_1 lane4_3600STDY6184432_ATTGGTAT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184433_CGCCAGTA_L004_17480_1 lane4_3600STDY6184434_AAGCCGAA_L004_17480_1 
#>                                      "0223"                                       "032" 
#> lane4_3600STDY6184435_TGACCCAC_L004_17480_1 lane4_3600STDY6184436_ATTGCACA_L004_17480_1 
#>                                       "021"                                      "0341" 
#> lane4_3600STDY6184437_CTTTTGAT_L004_17480_1 lane4_3600STDY6184438_TAGCGAGA_L004_17480_1 
#>                                       "021"                                      "0222" 
#> lane4_3600STDY6184439_TTCGCAGG_L004_17480_1 lane4_3600STDY6184440_TAGTTATT_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184441_TCCTCCGA_L004_17480_1 lane4_3600STDY6184442_GCGGGTCT_L004_17480_1 
#>                                      "0341"                                       "021" 
#> lane4_3600STDY6184443_GATTCTAT_L004_17480_1 lane4_3600STDY6184444_ATGCAAAG_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184445_GTCTGAGG_L004_17480_1 lane4_3600STDY6184446_TCTGGCGA_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184447_AATTTGCG_L004_17480_1 lane4_3600STDY6184448_TGGGTTGG_L004_17480_1 
#>                                      "0222"                                       "023" 
#> lane4_3600STDY6184449_AGTTGAAA_L004_17480_1 lane4_3600STDY6184450_GACCGGAA_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184451_GATCGAAC_L004_17480_1 lane4_3600STDY6184452_GTATAGGG_L004_17480_1 
#>                                      "0342"                                      "0341" 
#> lane4_3600STDY6184453_GGTAAGAG_L004_17480_1 lane4_3600STDY6184454_AGTCCGAT_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184455_ATACAGGC_L004_17480_1 lane4_3600STDY6184456_TGAGACTC_L004_17480_1 
#>                                       "021"                                      "0222" 
#> lane4_3600STDY6184457_ACTCAGGA_L004_17480_1 lane4_3600STDY6184458_GTGTCTGA_L004_17480_1 
#>                                       "021"                                      "0341" 
#> lane4_3600STDY6184459_CTTGAATC_L004_17480_1 lane4_3600STDY6184460_CCGCATGA_L004_17480_1 
#>                                       "021"                                      "0222" 
#> lane4_3600STDY6184461_AAGTAACA_L004_17480_1 lane4_3600STDY6184462_GTGGTACT_L004_17480_1 
#>                                      "0222"                                      "0222" 
#> lane4_3600STDY6184463_AGCTGTGC_L004_17480_1 lane4_3600STDY6184464_TTACCTTC_L004_17480_1 
#>                                      "0222"                                      "0222" 
#> lane4_3600STDY6184465_TCCGGGTA_L004_17480_1 lane4_3600STDY6184466_CTACGTAA_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184467_TCGGACCG_L004_17480_1 lane4_3600STDY6184468_ATGCGTCG_L004_17480_1 
#>                                       "021"                                       "032" 
#> lane4_3600STDY6184469_TTCTTAGC_L004_17480_1 lane4_3600STDY6184470_TGAGTAAG_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184471_AAGTGATA_L004_17480_1 lane4_3600STDY6184472_TCGATGCG_L004_17480_1 
#>                                       "021"                                      "0341" 
#> lane4_3600STDY6184473_TATTCTGG_L004_17480_1 lane4_3600STDY6184474_AGCCGTGA_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184475_AAGCCTTC_L004_17480_1 lane4_3600STDY6184476_AGGTATCC_L004_17480_1 
#>                                       "021"                                      "0341" 
#> lane4_3600STDY6184477_AGGATCTC_L004_17480_1 lane4_3600STDY6184478_CTGTTTGA_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184479_GGAATTTC_L004_17480_1 lane4_3600STDY6184480_TTGGAGCA_L004_17480_1 
#>                                      "0341"                                       "021" 
#> lane4_3600STDY6184481_AAGGTCTG_L004_17480_1 lane4_3600STDY6184482_AATTAGGC_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184483_AATCGGGT_L004_17480_1 lane4_3600STDY6184484_AGGTAGAC_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184485_CTTATTCC_L004_17480_1 lane4_3600STDY6184486_CAGGCTCT_L004_17480_1 
#>                                      "0341"                                      "0222" 
#> lane4_3600STDY6184487_AAAGCACG_L004_17480_1 lane4_3600STDY6184488_GTATACAC_L004_17480_1 
#>                                      "0222"                                       "021" 
#> lane4_3600STDY6184489_GGACATAT_L004_17480_1 lane4_3600STDY6184490_CGGTTGGG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184491_GTCCGTGA_L004_17480_1 lane4_3600STDY6184492_GCCGAACC_L004_17480_1 
#>                                       "021"                                      "0341" 
#> lane4_3600STDY6184493_ACTTTACT_L004_17480_1 lane4_3600STDY6184494_GGGTCCAT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184495_ATAACTAG_L004_17480_1 lane4_3600STDY6184496_AATAGAGA_L004_17480_1 
#>                                      "0341"                                      "0341" 
#> lane4_3600STDY6184497_TCACCATT_L004_17480_1 lane4_3600STDY6184498_CGCCTGAT_L004_17480_1 
#>                                      "0341"                                      "0222" 
#> lane4_3600STDY6184499_GCGTGAAC_L004_17480_1 lane4_3600STDY6184500_TAAGGGTG_L004_17480_1 
#>                                      "0341"                                       "021" 
#> lane4_3600STDY6184501_GGTGTCGA_L004_17480_1 lane4_3600STDY6184502_CCGTTAGG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184503_TGGCAAAA_L004_17480_1 lane4_3600STDY6184504_CCTACCCG_L004_17480_1 
#>                                       "021"                                      "0222" 
#> lane4_3600STDY6184505_AACAGCGC_L004_17480_1 lane4_3600STDY6184506_TATACATC_L004_17480_1 
#>                                       "021"                                      "0341" 
#> lane4_3600STDY6184507_AAGCGACT_L004_17480_1 lane4_3600STDY6184508_GAAGCGCA_L004_17480_1 
#>                                       "021"                                      "0222" 
#> lane4_3600STDY6184509_ACCTCTAC_L004_17480_1 lane4_3600STDY6184510_GATTGCGT_L004_17480_1 
#>                                      "0222"                                       "023" 
#> lane4_3600STDY6184511_GCTGGTTG_L004_17480_1 lane4_3600STDY6184512_ATCGTCCT_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184513_GGACACGG_L004_17480_1 lane4_3600STDY6184514_CGCACCTA_L004_17480_1 
#>                                      "0341"                                       "021" 
#> lane4_3600STDY6184515_CTTCGGCT_L004_17480_1 lane4_3600STDY6184516_CGAATCGA_L004_17480_1 
#>                                       "021"                                       "032" 
#> lane4_3600STDY6184517_TAACAACT_L004_17480_1 lane4_3600STDY6184518_AGCTCTTT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184519_TAATCCCT_L004_17480_1 lane4_3600STDY6184520_AGGACACT_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184521_TTACACTA_L004_17480_1 lane4_3600STDY6184522_AAACATCA_L004_17480_1 
#>                                      "0341"                                       "021" 
#> lane4_3600STDY6184523_CCATAGCT_L004_17480_1 lane4_3600STDY6184524_GTTATGGC_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184525_ATCCCCTA_L004_17480_1 lane4_3600STDY6184526_CATACTAC_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184527_CAATTGTT_L004_17480_1 lane4_3600STDY6184528_AAACCCGT_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184529_CAGATTTC_L004_17480_1 lane4_3600STDY6184530_GCGTAGGT_L004_17480_1 
#>                                       "032"                                      "0341" 
#> lane4_3600STDY6184531_GGCATTCG_L004_17480_1 lane4_3600STDY6184532_TGGGGCTT_L004_17480_1 
#>                                      "0341"                                       "021" 
#> lane4_3600STDY6184533_CTGACTAC_L004_17480_1 lane4_3600STDY6184534_AACTTTTA_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184535_AGGGATTC_L004_17480_1 lane4_3600STDY6184536_CCGAGTAG_L004_17480_1 
#>                                      "0221"                                       "021" 
#> lane4_3600STDY6184537_GGGGACTA_L004_17480_1 lane4_3600STDY6184538_GGAGTTGA_L004_17480_1 
#>                                       "032"                                       "021" 
#> lane4_3600STDY6184539_AGCTCATC_L004_17480_1 lane4_3600STDY6184540_TAATCAAC_L004_17480_1 
#>                                       "021"                                      "0341" 
#> lane4_3600STDY6184541_ACTGGTCG_L004_17480_1 lane4_3600STDY6184542_GACGATTG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184543_AGCGATGA_L004_17480_1 lane4_3600STDY6184544_GAAGAGAT_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184545_CGTATGCA_L004_17480_1 lane4_3600STDY6184546_CACGTGCG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184547_GCTTAAAC_L004_17480_1 lane4_3600STDY6184548_GTTCCGCA_L004_17480_1 
#>                                       "032"                                      "0221" 
#> lane4_3600STDY6184549_GTATCGTC_L004_17480_1 lane4_3600STDY6184550_GTCCTCAC_L004_17480_1 
#>                                      "0341"                                       "032" 
#> lane4_3600STDY6184551_GTACGGAC_L004_17480_1 lane4_3600STDY6184552_CATTTTGC_L004_17480_1 
#>                                      "0221"                                      "0221" 
#> lane4_3600STDY6184553_TCCTCTCT_L004_17480_1 lane4_3600STDY6184554_AGCAACGA_L004_17480_1 
#>                                       "021"                                      "0341" 
#> lane4_3600STDY6184555_ACAGAAGA_L004_17480_1 lane4_3600STDY6184556_CGACCCTT_L004_17480_1 
#>                                       "021"                                      "0341" 
#> lane4_3600STDY6184557_CTGCCTAG_L004_17480_1 lane4_3600STDY6184558_GAGCGCAT_L004_17480_1 
#>                                       "021"                                      "0222" 
#> lane4_3600STDY6184559_AACTTATC_L004_17480_1 lane4_3600STDY6184560_CCGATGTA_L004_17480_1 
#>                                      "0341"                                       "021" 
#> lane4_3600STDY6184561_TTACTACC_L004_17480_1 lane4_3600STDY6184562_CAAGGAGC_L004_17480_1 
#>                                      "0341"                                      "0221" 
#> lane4_3600STDY6184563_TGGTTGAC_L004_17480_1 lane4_3600STDY6184564_ACCTGCTG_L004_17480_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6183797_ATCACGTT_L001_17592_1 lane1_3600STDY6183798_CGATGTTT_L001_17592_1 
#>                                      "0221"                                       "031" 
#> lane1_3600STDY6183799_TTAGGCAT_L001_17592_1 lane1_3600STDY6183800_TGACCACT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183801_ACAGTGGT_L001_17592_1 lane1_3600STDY6183802_GCCAATGT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183803_CAGATCTG_L001_17592_1 lane1_3600STDY6183804_ACTTGATG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183805_GATCAGCG_L001_17592_1 lane1_3600STDY6183806_TAGCTTGT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183807_GGCTACAG_L001_17592_1 lane1_3600STDY6183808_CTTGTACT_L001_17592_1 
#>                                       "031"                                      "0223" 
#> lane1_3600STDY6183809_TGGTTGTT_L001_17592_1 lane1_3600STDY6183810_TCTCGGTT_L001_17592_1 
#>                                       "031"                                      "0221" 
#> lane1_3600STDY6183811_TAAGCGTT_L001_17592_1 lane1_3600STDY6183812_TCCGTCTT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183813_TGTACCTT_L001_17592_1 lane1_3600STDY6183814_TTCTGTGT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183815_TCTGCTGT_L001_17592_1 lane1_3600STDY6183816_TTGGAGGT_L001_17592_1 
#>                                       "033"                                      "0221" 
#> lane1_3600STDY6183817_TCGAGCGT_L001_17592_1 lane1_3600STDY6183818_TGATACGT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183819_TGCATAGT_L001_17592_1 lane1_3600STDY6183820_TTGACTCT_L001_17592_1 
#>                                       "031"                                      "0221" 
#> lane1_3600STDY6183821_TGCGATCT_L001_17592_1 lane1_3600STDY6183822_TTCCTGCT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183823_TAGTGACT_L001_17592_1 lane1_3600STDY6183824_TACAGGAT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183825_TCCTCAAT_L001_17592_1 lane1_3600STDY6183826_TGTGGTTG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183827_TAGTCTTG_L001_17592_1 lane1_3600STDY6183828_TTCCATTG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183829_TCGAAGTG_L001_17592_1 lane1_3600STDY6183830_TAACGCTG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183831_TTGGTATG_L001_17592_1 lane1_3600STDY6183832_TGAACTGG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183833_TACTTCGG_L001_17592_1 lane1_3600STDY6183834_TCTCACGG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183835_TCAGGAGG_L001_17592_1 lane1_3600STDY6183836_TAAGTTCG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183837_TCCAGTCG_L001_17592_1 lane1_3600STDY6183838_TGTATGCG_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183839_TCATTGAG_L001_17592_1 lane1_3600STDY6183840_TGGCTCAG_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6183841_TATGCCAG_L001_17592_1 lane1_3600STDY6183842_TCAGATTC_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6183843_TACTAGTC_L001_17592_1 lane1_3600STDY6183844_TTCAGCTC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183845_TGTCTATC_L001_17592_1 lane1_3600STDY6183846_TATGTGGC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183847_TTACTCGC_L001_17592_1 lane1_3600STDY6183848_TCGTTAGC_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183849_TACCGAGC_L001_17592_1 lane1_3600STDY6183850_TGTTCTCC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183851_TTCGCACC_L001_17592_1 lane1_3600STDY6183852_TTGCGTAC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183853_TCTACGAC_L001_17592_1 lane1_3600STDY6183854_TGACAGAC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183855_TAGAACAC_L001_17592_1 lane1_3600STDY6183856_TCATCCTA_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183857_TGCTGATA_L001_17592_1 lane1_3600STDY6183858_TAGACGGA_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6183859_TGTGAAGA_L001_17592_1 lane1_3600STDY6183860_TCTCTTCA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183861_TTGTTCCA_L001_17592_1 lane1_3600STDY6183862_TGAAGCCA_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183863_TACCACCA_L001_17592_1 lane1_3600STDY6183864_TGCGTGAA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6183865_GGTGAGTT_L001_17592_1 lane1_3600STDY6183866_GATCTCTT_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6183867_GTGTCCTT_L001_17592_1 lane1_3600STDY6183868_GACGGATT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183869_GCAACATT_L001_17592_1 lane1_3600STDY6183870_GGTCGTGT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183871_GAATCTGT_L001_17592_1 lane1_3600STDY6183872_GTACATCT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183873_GAGGTGCT_L001_17592_1 lane1_3600STDY6183874_GCATGGCT_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6183875_GTTAGCCT_L001_17592_1 lane1_3600STDY6183876_GTCGCTAT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183877_GGAATGAT_L001_17592_1 lane1_3600STDY6183878_GAGCCAAT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183879_GCTCCTTG_L001_17592_1 lane1_3600STDY6183880_GTAAGGTG_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183881_GAGGATGG_L001_17592_1 lane1_3600STDY6183882_GTTGTCGG_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183883_GGATTAGG_L001_17592_1 lane1_3600STDY6183884_GATAGAGG_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6183885_GTGTGTCG_L001_17592_1 lane1_3600STDY6183886_GCAATCCG_L001_17592_1 
#>                                       "023"                                      "0222" 
#> lane1_3600STDY6183887_GACCTTAG_L001_17592_1 lane1_3600STDY6183888_GCCTGTTC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183889_GCACTGTC_L001_17592_1 lane1_3600STDY6183890_GCTAACTC_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6183891_GATTCATC_L001_17592_1 lane1_3600STDY6183892_GTCTTGGC_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6183893_GTAGAAGC_L001_17592_1 lane1_3600STDY6183894_GATGGTCC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183895_GTGCTACC_L001_17592_1 lane1_3600STDY6183896_GCGATTAC_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183897_GGTTGGAC_L001_17592_1 lane1_3600STDY6183898_GGCACAAC_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6183899_GACACTTA_L001_17592_1 lane1_3600STDY6183900_GTGCAGTA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183901_GGAGTCTA_L001_17592_1 lane1_3600STDY6183902_GCTATGGA_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183903_GAGTGCGA_L001_17592_1 lane1_3600STDY6183904_GTAACCGA_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183905_GGCAAGCA_L001_17592_1 lane1_3600STDY6183906_GCCTTACA_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6183907_GAACGACA_L001_17592_1 lane1_3600STDY6183908_GCAGGTAA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6183909_GCGTCGAA_L001_17592_1 lane1_3600STDY6183910_CGTTCGGT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183911_CACCAGGT_L001_17592_1 lane1_3600STDY6183912_CTGCGAGT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183913_CCGTATCT_L001_17592_1 lane1_3600STDY6183914_CGCTTCCT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183915_CAAGACCT_L001_17592_1 lane1_3600STDY6183916_CACACACT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183917_CCTAGTAT_L001_17592_1 lane1_3600STDY6183918_CCACCGAT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183919_CTTCACAT_L001_17592_1 lane1_3600STDY6183920_CTATCATG_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183921_CATGAATG_L001_17592_1 lane1_3600STDY6183922_CCACTTGG_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183923_CTGTACGG_L001_17592_1 lane1_3600STDY6183924_CTAGATAG_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183925_CACTCGAG_L001_17592_1 lane1_3600STDY6183926_CCGACAAG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183927_CTTGCTTC_L001_17592_1 lane1_3600STDY6183928_CATAGGTC_L001_17592_1 
#>                                       "023"                                       "021" 
#> lane1_3600STDY6183929_CACATTGC_L001_17592_1 lane1_3600STDY6183930_CGCTAAGC_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6183931_CAACCTCC_L001_17592_1 lane1_3600STDY6183932_CAGCTGAC_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6183933_CTCAAGAC_L001_17592_1 lane1_3600STDY6183934_CGTGTCAC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183935_CCATGCAC_L001_17592_1 lane1_3600STDY6183936_CGTTACTA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183937_CAAGTAGA_L001_17592_1 lane1_3600STDY6183938_CTCTCTCA_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183939_CGACTGCA_L001_17592_1 lane1_3600STDY6183940_CCTGAGCA_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183941_CAGGCTAA_L001_17592_1 lane1_3600STDY6183942_CGGAGGAA_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183943_AGGAGATT_L001_17592_1 lane1_3600STDY6183944_AGGCAGCT_L001_17592_1 
#>                                       "031"                                       "021" 
#> lane1_3600STDY6183945_ACGTTCAT_L001_17592_1 lane1_3600STDY6183946_AACGTGTG_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183947_AGACCGTG_L001_17592_1 lane1_3600STDY6183948_ACCTCTGG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183949_ATCCTAGG_L001_17592_1 lane1_3600STDY6183950_ATCAACCG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183951_AGGTCACG_L001_17592_1 lane1_3600STDY6183952_ACTGTTAG_L001_17592_1 
#>                                       "031"                                      "0221" 
#> lane1_3600STDY6183953_AAGAGTAG_L001_17592_1 lane1_3600STDY6183954_ATTCGGAG_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6183955_ACGCAATC_L001_17592_1 lane1_3600STDY6183956_ACAAGTGC_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6183957_ATGGATCC_L001_17592_1 lane1_3600STDY6183958_AGAGGACC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183959_ATCTCCAC_L001_17592_1 lane1_3600STDY6183960_ATTGGCTA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183961_AATCCTGA_L001_17592_1 lane1_3600STDY6183962_AGGATTCA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183963_AACTGGCA_L001_17592_1 lane1_3600STDY6183964_ACAACGCA_L001_17592_1 
#>                                       "033"                                      "0223" 
#> lane1_3600STDY6183965_CGGAAACA_L001_17592_1 lane1_3600STDY6183966_AATGAATT_L001_17592_1 
#>                                      "0222"                                       "033" 
#> lane1_3600STDY6183967_TAGGACCC_L001_17592_1 lane1_3600STDY6183968_TCTCAGTG_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183969_CATGGGAA_L001_17592_1 lane1_3600STDY6183970_CCTAAGAT_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6183971_CTCAGATA_L001_17592_1 lane1_3600STDY6183972_CCCATAGG_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183973_GCTATGAC_L001_17592_1 lane1_3600STDY6183974_GCTGTGAA_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183975_ACCTTCAA_L001_17592_1 lane1_3600STDY6183976_ACAAAGCC_L001_17592_1 
#>                                       "023"                                       "021" 
#> lane1_3600STDY6183977_CAAAACCG_L001_17592_1 lane1_3600STDY6183978_GCTGGACA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183979_AAGTCGTA_L001_17592_1 lane1_3600STDY6183980_CATCCGTA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183981_TTGTGTCT_L001_17592_1 lane1_3600STDY6183982_TGCTCTAG_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183983_ACCCAACA_L001_17592_1 lane1_3600STDY6183984_CGATCTGA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183985_GTTCCACG_L001_17592_1 lane1_3600STDY6183986_ACTCTTTC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183987_TATTGGAG_L001_17592_1 lane1_3600STDY6183988_TAAACATA_L001_17592_1 
#>                                       "023"                                      "0221" 
#> lane1_3600STDY6183989_GTAAGATA_L001_17592_1 lane1_3600STDY6183990_TACCGCAA_L001_17592_1 
#>                                      "0221"                                       "031" 
#> lane1_3600STDY6183991_TATCTCCT_L001_17592_1 lane1_3600STDY6183992_TGTCATCT_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6183993_ATAGCTCT_L001_17592_1 lane1_3600STDY6183994_AGTCCAAC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183995_TTTGGGCA_L001_17592_1 lane1_3600STDY6183996_TCTGACGC_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6183997_TGTCGACT_L001_17592_1 lane1_3600STDY6183998_GTCACGTA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183999_TTGAGCGA_L001_17592_1 lane1_3600STDY6184000_GAGACATA_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6184001_GTCAAGCT_L001_17592_1 lane1_3600STDY6184002_AGCAAGTT_L001_17592_1 
#>                                      "0221"                                       "031" 
#> lane1_3600STDY6184003_GACGCTCA_L001_17592_1 lane1_3600STDY6184004_ACGGCAGC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184005_AGAACTGA_L001_17592_1 lane1_3600STDY6184006_CGCCTTTG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184007_TAAGGTCA_L001_17592_1 lane1_3600STDY6184008_ACGTTGGC_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184009_CCAGCTTA_L001_17592_1 lane1_3600STDY6184010_GAATCCTA_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184011_ACTTCGTA_L001_17592_1 lane1_3600STDY6184012_TAGTCGGT_L001_17592_1 
#>                                      "0223"                                       "031" 
#> lane1_3600STDY6184013_CGCACGAG_L001_17592_1 lane1_3600STDY6184014_ACGTACTA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184015_AGCGCCAA_L001_17592_1 lane1_3600STDY6184016_GCCTGCCC_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6184017_AGGACGAT_L001_17592_1 lane1_3600STDY6184018_CTTGACCG_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6184019_AGGTCTAA_L001_17592_1 lane1_3600STDY6184020_CGAGATCC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184021_ATTAGCGG_L001_17592_1 lane1_3600STDY6184022_GCGCTGAT_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6184023_TGCTGAAC_L001_17592_1 lane1_3600STDY6184024_GAGGGCAG_L001_17592_1 
#>                                      "0221"                                       "031" 
#> lane1_3600STDY6184025_GTTTTCAC_L001_17592_1 lane1_3600STDY6184026_GAGATGCC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184027_TTGAGAAG_L001_17592_1 lane1_3600STDY6184028_GCATCCGG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184029_GTCACCAG_L001_17592_1 lane1_3600STDY6184030_GAGGTCGC_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184031_AAGGGGTA_L001_17592_1 lane1_3600STDY6184032_TTTTACGT_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184033_TTCCTACA_L001_17592_1 lane1_3600STDY6184034_AGTGTAGT_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6184035_GTGGCCAA_L001_17592_1 lane1_3600STDY6184036_AAATACTC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184037_CACCCGTC_L001_17592_1 lane1_3600STDY6184038_TCGTGGTT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184039_ACTTGGGG_L001_17592_1 lane1_3600STDY6184040_GGCTGCTT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184041_CAGGGTCG_L001_17592_1 lane1_3600STDY6184042_CTCGTCGA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184043_TCTACAGT_L001_17592_1 lane1_3600STDY6184044_CTTCTAGA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184045_AACGGCTT_L001_17592_1 lane1_3600STDY6184046_ATAAGACT_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6184047_GTTTTTCG_L001_17592_1 lane1_3600STDY6184048_ATTGGTAT_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6184049_CGCCAGTA_L001_17592_1 lane1_3600STDY6184050_AAGCCGAA_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184051_TGACCCAC_L001_17592_1 lane1_3600STDY6184052_ATTGCACA_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6184053_CTTTTGAT_L001_17592_1 lane1_3600STDY6184054_TAGCGAGA_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184055_TTCGCAGG_L001_17592_1 lane1_3600STDY6184056_TAGTTATT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184057_TCCTCCGA_L001_17592_1 lane1_3600STDY6184058_GCGGGTCT_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6184059_GATTCTAT_L001_17592_1 lane1_3600STDY6184060_ATGCAAAG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184061_GTCTGAGG_L001_17592_1 lane1_3600STDY6184062_TCTGGCGA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184063_AATTTGCG_L001_17592_1 lane1_3600STDY6184064_TGGGTTGG_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184065_AGTTGAAA_L001_17592_1 lane1_3600STDY6184066_GACCGGAA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184067_GATCGAAC_L001_17592_1 lane1_3600STDY6184068_GTATAGGG_L001_17592_1 
#>                                      "0222"                                      "0222" 
#> lane1_3600STDY6184069_GGTAAGAG_L001_17592_1 lane1_3600STDY6184070_AGTCCGAT_L001_17592_1 
#>                                      "0342"                                       "023" 
#> lane1_3600STDY6184071_ATACAGGC_L001_17592_1 lane1_3600STDY6184072_TGAGACTC_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6184073_ACTCAGGA_L001_17592_1 lane1_3600STDY6184074_GTGTCTGA_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184075_CTTGAATC_L001_17592_1 lane1_3600STDY6184076_CCGCATGA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184077_AAGTAACA_L001_17592_1 lane1_3600STDY6184078_GTGGTACT_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184079_AGCTGTGC_L001_17592_1 lane1_3600STDY6184080_TTACCTTC_L001_17592_1 
#>                                      "0222"                                       "033" 
#> lane1_3600STDY6184081_TCCGGGTA_L001_17592_1 lane1_3600STDY6184082_CTACGTAA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184083_TCGGACCG_L001_17592_1 lane1_3600STDY6184084_ATGCGTCG_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184085_TTCTTAGC_L001_17592_1 lane1_3600STDY6184086_TGAGTAAG_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184087_AAGTGATA_L001_17592_1 lane1_3600STDY6184088_TCGATGCG_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184089_TATTCTGG_L001_17592_1 lane1_3600STDY6184090_AGCCGTGA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184091_AAGCCTTC_L001_17592_1 lane1_3600STDY6184092_AGGTATCC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184093_AGGATCTC_L001_17592_1 lane1_3600STDY6184094_CTGTTTGA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184095_GGAATTTC_L001_17592_1 lane1_3600STDY6184096_TTGGAGCA_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6184097_AAGGTCTG_L001_17592_1 lane1_3600STDY6184098_AATTAGGC_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184099_AATCGGGT_L001_17592_1 lane1_3600STDY6184100_AGGTAGAC_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184101_CTTATTCC_L001_17592_1 lane1_3600STDY6184102_CAGGCTCT_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184103_AAAGCACG_L001_17592_1 lane1_3600STDY6184104_GTATACAC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184105_GGACATAT_L001_17592_1 lane1_3600STDY6184106_CGGTTGGG_L001_17592_1 
#>                                      "0222"                                       "023" 
#> lane1_3600STDY6184107_GTCCGTGA_L001_17592_1 lane1_3600STDY6184108_GCCGAACC_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184109_ACTTTACT_L001_17592_1 lane1_3600STDY6184110_GGGTCCAT_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184111_ATAACTAG_L001_17592_1 lane1_3600STDY6184112_AATAGAGA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184113_TCACCATT_L001_17592_1 lane1_3600STDY6184114_CGCCTGAT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184115_GCGTGAAC_L001_17592_1 lane1_3600STDY6184116_TAAGGGTG_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184117_GGTGTCGA_L001_17592_1 lane1_3600STDY6184118_CCGTTAGG_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184119_TGGCAAAA_L001_17592_1 lane1_3600STDY6184120_CCTACCCG_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6184121_AACAGCGC_L001_17592_1 lane1_3600STDY6184122_TATACATC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184123_AAGCGACT_L001_17592_1 lane1_3600STDY6184124_GAAGCGCA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184125_ACCTCTAC_L001_17592_1 lane1_3600STDY6184126_GATTGCGT_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184127_GCTGGTTG_L001_17592_1 lane1_3600STDY6184128_ATCGTCCT_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184129_GGACACGG_L001_17592_1 lane1_3600STDY6184130_CGCACCTA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184131_CTTCGGCT_L001_17592_1 lane1_3600STDY6184132_CGAATCGA_L001_17592_1 
#>                                       "031"                                      "0222" 
#> lane1_3600STDY6184133_TAACAACT_L001_17592_1 lane1_3600STDY6184134_AGCTCTTT_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184135_TAATCCCT_L001_17592_1 lane1_3600STDY6184136_AGGACACT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184137_TTACACTA_L001_17592_1 lane1_3600STDY6184138_AAACATCA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184139_CCATAGCT_L001_17592_1 lane1_3600STDY6184140_GTTATGGC_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184141_ATCCCCTA_L001_17592_1 lane1_3600STDY6184142_CATACTAC_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6184143_CAATTGTT_L001_17592_1 lane1_3600STDY6184144_AAACCCGT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184145_CAGATTTC_L001_17592_1 lane1_3600STDY6184146_GCGTAGGT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184147_GGCATTCG_L001_17592_1 lane1_3600STDY6184148_TGGGGCTT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184149_CTGACTAC_L001_17592_1 lane1_3600STDY6184150_AACTTTTA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184151_AGGGATTC_L001_17592_1 lane1_3600STDY6184152_CCGAGTAG_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6184153_GGGGACTA_L001_17592_1 lane1_3600STDY6184154_GGAGTTGA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184155_AGCTCATC_L001_17592_1 lane1_3600STDY6184156_TAATCAAC_L001_17592_1 
#>                                       "031"                                      "0221" 
#> lane1_3600STDY6184157_ACTGGTCG_L001_17592_1 lane1_3600STDY6184158_GACGATTG_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6184159_AGCGATGA_L001_17592_1 lane1_3600STDY6184160_GAAGAGAT_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184161_CGTATGCA_L001_17592_1 lane1_3600STDY6184162_CACGTGCG_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184163_GCTTAAAC_L001_17592_1 lane1_3600STDY6184164_GTTCCGCA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184165_GTATCGTC_L001_17592_1 lane1_3600STDY6184166_GTCCTCAC_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184167_GTACGGAC_L001_17592_1 lane1_3600STDY6184168_CATTTTGC_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6184169_TCCTCTCT_L001_17592_1 lane1_3600STDY6184170_AGCAACGA_L001_17592_1 
#>                                      "0341"                                       "023" 
#> lane1_3600STDY6184171_ACAGAAGA_L001_17592_1 lane1_3600STDY6184172_CGACCCTT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184173_CTGCCTAG_L001_17592_1 lane1_3600STDY6184174_GAGCGCAT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184175_AACTTATC_L001_17592_1 lane1_3600STDY6184176_CCGATGTA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184177_TTACTACC_L001_17592_1 lane1_3600STDY6184178_CAAGGAGC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184179_TGGTTGAC_L001_17592_1 lane1_3600STDY6184180_ACCTGCTG_L001_17592_1 
#>                                       "031"                                      "0221"

show/hide code output

get_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 5659))
#> lane1_3600STDY6077864_ATCACGTT_L001_15986_1 lane1_3600STDY6077865_CGATGTTT_L001_15986_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6077866_TTAGGCAT_L001_15986_1 lane1_3600STDY6077867_TGACCACT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077868_ACAGTGGT_L001_15986_1 lane1_3600STDY6077869_GCCAATGT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077870_CAGATCTG_L001_15986_1 lane1_3600STDY6077871_ACTTGATG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077872_GATCAGCG_L001_15986_1 lane1_3600STDY6077873_TAGCTTGT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077874_GGCTACAG_L001_15986_1 lane1_3600STDY6077875_CTTGTACT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077876_TGGTTGTT_L001_15986_1 lane1_3600STDY6077877_TCTCGGTT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077878_TAAGCGTT_L001_15986_1 lane1_3600STDY6077879_TCCGTCTT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077880_TGTACCTT_L001_15986_1 lane1_3600STDY6077881_TTCTGTGT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077882_TCTGCTGT_L001_15986_1 lane1_3600STDY6077883_TTGGAGGT_L001_15986_1 
#>                                      "0121"                                      "0221" 
#> lane1_3600STDY6077884_TCGAGCGT_L001_15986_1 lane1_3600STDY6077885_TGATACGT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077886_TGCATAGT_L001_15986_1 lane1_3600STDY6077887_TTGACTCT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077888_TGCGATCT_L001_15986_1 lane1_3600STDY6077889_TTCCTGCT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077890_TAGTGACT_L001_15986_1 lane1_3600STDY6077891_TACAGGAT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077892_TCCTCAAT_L001_15986_1 lane1_3600STDY6077893_TGTGGTTG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077894_TAGTCTTG_L001_15986_1 lane1_3600STDY6077895_TTCCATTG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077896_TCGAAGTG_L001_15986_1 lane1_3600STDY6077897_TAACGCTG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077898_TTGGTATG_L001_15986_1 lane1_3600STDY6077899_TGAACTGG_L001_15986_1 
#>                                      "0121"                                      "0221" 
#> lane1_3600STDY6077900_TACTTCGG_L001_15986_1 lane1_3600STDY6077901_TCTCACGG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077902_TCAGGAGG_L001_15986_1 lane1_3600STDY6077903_TAAGTTCG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077904_TCCAGTCG_L001_15986_1 lane1_3600STDY6077905_TGTATGCG_L001_15986_1 
#>                                      "0221"                                      "0121" 
#> lane1_3600STDY6077906_TCATTGAG_L001_15986_1 lane1_3600STDY6077907_TGGCTCAG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077908_TATGCCAG_L001_15986_1 lane1_3600STDY6077909_TCAGATTC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077910_TACTAGTC_L001_15986_1 lane1_3600STDY6077911_TTCAGCTC_L001_15986_1 
#>                                      "0121"                                      "0221" 
#> lane1_3600STDY6077912_TGTCTATC_L001_15986_1 lane1_3600STDY6077913_TATGTGGC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077914_TTACTCGC_L001_15986_1 lane1_3600STDY6077915_TCGTTAGC_L001_15986_1 
#>                                      "0221"                                      "0121" 
#> lane1_3600STDY6077916_TACCGAGC_L001_15986_1 lane1_3600STDY6077917_TGTTCTCC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077918_TTCGCACC_L001_15986_1 lane1_3600STDY6077919_TTGCGTAC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077920_TCTACGAC_L001_15986_1 lane1_3600STDY6077921_TGACAGAC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077922_TAGAACAC_L001_15986_1 lane1_3600STDY6077923_TCATCCTA_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077924_TGCTGATA_L001_15986_1 lane1_3600STDY6077925_TAGACGGA_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077926_TGTGAAGA_L001_15986_1 lane1_3600STDY6077927_TCTCTTCA_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077928_TTGTTCCA_L001_15986_1 lane1_3600STDY6077929_TGAAGCCA_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077930_TACCACCA_L001_15986_1 lane1_3600STDY6077931_TGCGTGAA_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077932_GGTGAGTT_L001_15986_1 lane1_3600STDY6077933_GATCTCTT_L001_15986_1 
#>                                      "0121"                                      "0221" 
#> lane1_3600STDY6077934_GTGTCCTT_L001_15986_1 lane1_3600STDY6077935_GACGGATT_L001_15986_1 
#>                                      "0221"                                      "0121" 
#> lane1_3600STDY6077936_GCAACATT_L001_15986_1 lane1_3600STDY6077937_GGTCGTGT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077938_GAATCTGT_L001_15986_1 lane1_3600STDY6077939_GTACATCT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077940_GAGGTGCT_L001_15986_1 lane1_3600STDY6077941_GCATGGCT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077942_GTTAGCCT_L001_15986_1 lane1_3600STDY6077943_GTCGCTAT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077944_GGAATGAT_L001_15986_1 lane1_3600STDY6077945_GAGCCAAT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077946_GCTCCTTG_L001_15986_1 lane1_3600STDY6077947_GTAAGGTG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077948_GAGGATGG_L001_15986_1 lane1_3600STDY6077949_GTTGTCGG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077950_GGATTAGG_L001_15986_1 lane1_3600STDY6077951_GATAGAGG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077952_GTGTGTCG_L001_15986_1 lane1_3600STDY6077953_GCAATCCG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077954_GACCTTAG_L001_15986_1 lane1_3600STDY6077955_GCCTGTTC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077956_GCACTGTC_L001_15986_1 lane1_3600STDY6077957_GCTAACTC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077958_GATTCATC_L001_15986_1 lane1_3600STDY6077959_GTCTTGGC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane3_3600STDY6077960_ATCACGTT_L003_15987_1 lane3_3600STDY6077961_CGATGTTT_L003_15987_1 
#>                                      "0221"                                      "0221" 
#> lane3_3600STDY6077962_TTAGGCAT_L003_15987_1 lane3_3600STDY6077963_TGACCACT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077964_ACAGTGGT_L003_15987_1 lane3_3600STDY6077965_GCCAATGT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077966_CAGATCTG_L003_15987_1 lane3_3600STDY6077967_ACTTGATG_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077968_GATCAGCG_L003_15987_1 lane3_3600STDY6077969_TAGCTTGT_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6077970_GGCTACAG_L003_15987_1 lane3_3600STDY6077971_CTTGTACT_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6077972_TGGTTGTT_L003_15987_1 lane3_3600STDY6077973_TCTCGGTT_L003_15987_1 
#>                                      "0123"                                      "0122" 
#> lane3_3600STDY6077974_TAAGCGTT_L003_15987_1 lane3_3600STDY6077975_TCCGTCTT_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6077976_TGTACCTT_L003_15987_1 lane3_3600STDY6077977_TTCTGTGT_L003_15987_1 
#>                                      "0123"                                      "0122" 
#> lane3_3600STDY6077978_TCTGCTGT_L003_15987_1 lane3_3600STDY6077979_TTGGAGGT_L003_15987_1 
#>                                      "0224"                                      "0122" 
#> lane3_3600STDY6077980_TCGAGCGT_L003_15987_1 lane3_3600STDY6077981_TGATACGT_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6077982_TGCATAGT_L003_15987_1 lane3_3600STDY6077983_TTGACTCT_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6077984_TGCGATCT_L003_15987_1 lane3_3600STDY6077985_TTCCTGCT_L003_15987_1 
#>                                      "0123"                                      "0122" 
#> lane3_3600STDY6077986_TAGTGACT_L003_15987_1 lane3_3600STDY6077987_TACAGGAT_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6077988_TCCTCAAT_L003_15987_1 lane3_3600STDY6077989_TGTGGTTG_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077990_TAGTCTTG_L003_15987_1 lane3_3600STDY6077991_TTCCATTG_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6077992_TCGAAGTG_L003_15987_1 lane3_3600STDY6077993_TAACGCTG_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6077994_TTGGTATG_L003_15987_1 lane3_3600STDY6077995_TGAACTGG_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6077996_TACTTCGG_L003_15987_1 lane3_3600STDY6077997_TCTCACGG_L003_15987_1 
#>                                      "0122"                                      "0224" 
#> lane3_3600STDY6077998_TCAGGAGG_L003_15987_1 lane3_3600STDY6077999_TAAGTTCG_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078000_TCCAGTCG_L003_15987_1 lane3_3600STDY6078001_TGTATGCG_L003_15987_1 
#>                                      "0122"                                      "0221" 
#> lane3_3600STDY6078002_TCATTGAG_L003_15987_1 lane3_3600STDY6078003_TGGCTCAG_L003_15987_1 
#>                                       "034"                                      "0122" 
#> lane3_3600STDY6078004_TATGCCAG_L003_15987_1 lane3_3600STDY6078005_TCAGATTC_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6078006_TACTAGTC_L003_15987_1 lane3_3600STDY6078007_TTCAGCTC_L003_15987_1 
#>                                      "0123"                                      "0122" 
#> lane3_3600STDY6078008_TGTCTATC_L003_15987_1 lane3_3600STDY6078009_TATGTGGC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078010_TTACTCGC_L003_15987_1 lane3_3600STDY6078011_TCGTTAGC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078012_TACCGAGC_L003_15987_1 lane3_3600STDY6078013_TGTTCTCC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078014_TTCGCACC_L003_15987_1 lane3_3600STDY6078015_TTGCGTAC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078016_TCTACGAC_L003_15987_1 lane3_3600STDY6078017_TGACAGAC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078018_TAGAACAC_L003_15987_1 lane3_3600STDY6078019_TCATCCTA_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078020_TGCTGATA_L003_15987_1 lane3_3600STDY6078021_TAGACGGA_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078022_TGTGAAGA_L003_15987_1 lane3_3600STDY6078023_TCTCTTCA_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078024_TTGTTCCA_L003_15987_1 lane3_3600STDY6078025_TGAAGCCA_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078026_TACCACCA_L003_15987_1 lane3_3600STDY6078027_TGCGTGAA_L003_15987_1 
#>                                      "0123"                                      "0221" 
#> lane3_3600STDY6078028_GGTGAGTT_L003_15987_1 lane3_3600STDY6078029_GATCTCTT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078030_GTGTCCTT_L003_15987_1 lane3_3600STDY6078031_GACGGATT_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078032_GCAACATT_L003_15987_1 lane3_3600STDY6078033_GGTCGTGT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078034_GAATCTGT_L003_15987_1 lane3_3600STDY6078035_GTACATCT_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6078036_GAGGTGCT_L003_15987_1 lane3_3600STDY6078037_GCATGGCT_L003_15987_1 
#>                                      "0123"                                      "0122" 
#> lane3_3600STDY6078038_GTTAGCCT_L003_15987_1 lane3_3600STDY6078039_GTCGCTAT_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078040_GGAATGAT_L003_15987_1 lane3_3600STDY6078041_GAGCCAAT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078042_GCTCCTTG_L003_15987_1 lane3_3600STDY6078043_GTAAGGTG_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078044_GAGGATGG_L003_15987_1 lane3_3600STDY6078045_GTTGTCGG_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078046_GGATTAGG_L003_15987_1 lane3_3600STDY6078047_GATAGAGG_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078048_GTGTGTCG_L003_15987_1 lane3_3600STDY6078049_GCAATCCG_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078050_GACCTTAG_L003_15987_1 lane3_3600STDY6078051_GCCTGTTC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078052_GCACTGTC_L003_15987_1 lane3_3600STDY6078053_GCTAACTC_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6078054_GATTCATC_L003_15987_1 lane3_3600STDY6078055_GTCTTGGC_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane1_3600STDY6167693_ATCACGTT_L001_17236_1 lane1_3600STDY6167694_CGATGTTT_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167695_TTAGGCAT_L001_17236_1 lane1_3600STDY6167696_TGACCACT_L001_17236_1 
#>                                       "034"                                       "011" 
#> lane1_3600STDY6167697_ACAGTGGT_L001_17236_1 lane1_3600STDY6167698_GCCAATGT_L001_17236_1 
#>                                      "0224"                                       "011" 
#> lane1_3600STDY6167699_CAGATCTG_L001_17236_1 lane1_3600STDY6167700_ACTTGATG_L001_17236_1 
#>                                       "011"                                      "0221" 
#> lane1_3600STDY6167701_GATCAGCG_L001_17236_1 lane1_3600STDY6167702_TAGCTTGT_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167703_GGCTACAG_L001_17236_1 lane1_3600STDY6167704_CTTGTACT_L001_17236_1 
#>                                       "014"                                       "034" 
#> lane1_3600STDY6167705_TGGTTGTT_L001_17236_1 lane1_3600STDY6167706_TCTCGGTT_L001_17236_1 
#>                                       "014"                                      "0221" 
#> lane1_3600STDY6167707_TAAGCGTT_L001_17236_1 lane1_3600STDY6167708_TCCGTCTT_L001_17236_1 
#>                                      "0221"                                       "013" 
#> lane1_3600STDY6167709_TGTACCTT_L001_17236_1 lane1_3600STDY6167710_TTCTGTGT_L001_17236_1 
#>                                       "011"                                      "0221" 
#> lane1_3600STDY6167711_TCTGCTGT_L001_17236_1 lane1_3600STDY6167712_TTGGAGGT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167713_TCGAGCGT_L001_17236_1 lane1_3600STDY6167714_TGATACGT_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167715_TGCATAGT_L001_17236_1 lane1_3600STDY6167716_TTGACTCT_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167717_TGCGATCT_L001_17236_1 lane1_3600STDY6167718_TTCCTGCT_L001_17236_1 
#>                                       "013"                                      "0221" 
#> lane1_3600STDY6167719_TAGTGACT_L001_17236_1 lane1_3600STDY6167720_TACAGGAT_L001_17236_1 
#>                                       "034"                                       "034" 
#> lane1_3600STDY6167721_TCCTCAAT_L001_17236_1 lane1_3600STDY6167722_TGTGGTTG_L001_17236_1 
#>                                       "034"                                       "011" 
#> lane1_3600STDY6167723_TAGTCTTG_L001_17236_1 lane1_3600STDY6167724_TTCCATTG_L001_17236_1 
#>                                       "011"                                      "0221" 
#> lane1_3600STDY6167725_TCGAAGTG_L001_17236_1 lane1_3600STDY6167726_TAACGCTG_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167727_TTGGTATG_L001_17236_1 lane1_3600STDY6167728_TGAACTGG_L001_17236_1 
#>                                       "013"                                      "0121" 
#> lane1_3600STDY6167729_TACTTCGG_L001_17236_1 lane1_3600STDY6167730_TCTCACGG_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167731_TCAGGAGG_L001_17236_1 lane1_3600STDY6167732_TAAGTTCG_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167733_TCCAGTCG_L001_17236_1 lane1_3600STDY6167734_TGTATGCG_L001_17236_1 
#>                                       "011"                                      "0221" 
#> lane1_3600STDY6167735_TCATTGAG_L001_17236_1 lane1_3600STDY6167736_TGGCTCAG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167737_TATGCCAG_L001_17236_1 lane1_3600STDY6167738_TCAGATTC_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167739_TACTAGTC_L001_17236_1 lane1_3600STDY6167740_TTCAGCTC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167741_TGTCTATC_L001_17236_1 lane1_3600STDY6167742_TATGTGGC_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167743_TTACTCGC_L001_17236_1 lane1_3600STDY6167744_TCGTTAGC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167745_TACCGAGC_L001_17236_1 lane1_3600STDY6167746_TGTTCTCC_L001_17236_1 
#>                                       "034"                                       "011" 
#> lane1_3600STDY6167747_TTCGCACC_L001_17236_1 lane1_3600STDY6167748_TTGCGTAC_L001_17236_1 
#>                                       "034"                                       "011" 
#> lane1_3600STDY6167749_TCTACGAC_L001_17236_1 lane1_3600STDY6167750_TGACAGAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167751_TAGAACAC_L001_17236_1 lane1_3600STDY6167752_TCATCCTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167753_TGCTGATA_L001_17236_1 lane1_3600STDY6167754_TAGACGGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167755_TGTGAAGA_L001_17236_1 lane1_3600STDY6167756_TCTCTTCA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167757_TTGTTCCA_L001_17236_1 lane1_3600STDY6167758_TGAAGCCA_L001_17236_1 
#>                                       "011"                                      "0221" 
#> lane1_3600STDY6167759_TACCACCA_L001_17236_1 lane1_3600STDY6167760_TGCGTGAA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167761_GGTGAGTT_L001_17236_1 lane1_3600STDY6167762_GATCTCTT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167763_GTGTCCTT_L001_17236_1 lane1_3600STDY6167764_GACGGATT_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167765_GCAACATT_L001_17236_1 lane1_3600STDY6167766_GGTCGTGT_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167767_GAATCTGT_L001_17236_1 lane1_3600STDY6167768_GTACATCT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167769_GAGGTGCT_L001_17236_1 lane1_3600STDY6167770_GCATGGCT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167771_GTTAGCCT_L001_17236_1 lane1_3600STDY6167772_GTCGCTAT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167773_GGAATGAT_L001_17236_1 lane1_3600STDY6167774_GAGCCAAT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167775_GCTCCTTG_L001_17236_1 lane1_3600STDY6167776_GTAAGGTG_L001_17236_1 
#>                                       "011"                                      "0221" 
#> lane1_3600STDY6167777_GAGGATGG_L001_17236_1 lane1_3600STDY6167778_GTTGTCGG_L001_17236_1 
#>                                       "011"                                      "0221" 
#> lane1_3600STDY6167779_GGATTAGG_L001_17236_1 lane1_3600STDY6167780_GATAGAGG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167781_GTGTGTCG_L001_17236_1 lane1_3600STDY6167782_GCAATCCG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167783_GACCTTAG_L001_17236_1 lane1_3600STDY6167784_GCCTGTTC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167785_GCACTGTC_L001_17236_1 lane1_3600STDY6167786_GCTAACTC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167787_GATTCATC_L001_17236_1 lane1_3600STDY6167788_GTCTTGGC_L001_17236_1 
#>                                       "011"                                      "0221" 
#> lane1_3600STDY6167789_GTAGAAGC_L001_17236_1 lane1_3600STDY6167790_GATGGTCC_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167791_GTGCTACC_L001_17236_1 lane1_3600STDY6167792_GCGATTAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167793_GGTTGGAC_L001_17236_1 lane1_3600STDY6167794_GGCACAAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167795_GACACTTA_L001_17236_1 lane1_3600STDY6167796_GTGCAGTA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167797_GGAGTCTA_L001_17236_1 lane1_3600STDY6167798_GCTATGGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167799_GAGTGCGA_L001_17236_1 lane1_3600STDY6167800_GTAACCGA_L001_17236_1 
#>                                       "034"                                       "011" 
#> lane1_3600STDY6167801_GGCAAGCA_L001_17236_1 lane1_3600STDY6167802_GCCTTACA_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167803_GAACGACA_L001_17236_1 lane1_3600STDY6167804_GCAGGTAA_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167805_GCGTCGAA_L001_17236_1 lane1_3600STDY6167806_CGTTCGGT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167807_CACCAGGT_L001_17236_1 lane1_3600STDY6167808_CTGCGAGT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167809_CCGTATCT_L001_17236_1 lane1_3600STDY6167810_CGCTTCCT_L001_17236_1 
#>                                       "011"                                      "0222" 
#> lane1_3600STDY6167811_CAAGACCT_L001_17236_1 lane1_3600STDY6167812_CACACACT_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167813_CCTAGTAT_L001_17236_1 lane1_3600STDY6167814_CCACCGAT_L001_17236_1 
#>                                      "0221"                                       "011" 
#> lane1_3600STDY6167815_CTTCACAT_L001_17236_1 lane1_3600STDY6167816_CTATCATG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167817_CATGAATG_L001_17236_1 lane1_3600STDY6167818_CCACTTGG_L001_17236_1 
#>                                       "034"                                       "011" 
#> lane1_3600STDY6167819_CTGTACGG_L001_17236_1 lane1_3600STDY6167820_CTAGATAG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167821_CACTCGAG_L001_17236_1 lane1_3600STDY6167822_CCGACAAG_L001_17236_1 
#>                                       "034"                                       "013" 
#> lane1_3600STDY6167823_CTTGCTTC_L001_17236_1 lane1_3600STDY6167824_CATAGGTC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167825_CACATTGC_L001_17236_1 lane1_3600STDY6167826_CGCTAAGC_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167827_CAACCTCC_L001_17236_1 lane1_3600STDY6167828_CAGCTGAC_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167829_CTCAAGAC_L001_17236_1 lane1_3600STDY6167830_CGTGTCAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167831_CCATGCAC_L001_17236_1 lane1_3600STDY6167832_CGTTACTA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167833_CAAGTAGA_L001_17236_1 lane1_3600STDY6167834_CTCTCTCA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167835_CGACTGCA_L001_17236_1 lane1_3600STDY6167836_CCTGAGCA_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167837_CAGGCTAA_L001_17236_1 lane1_3600STDY6167838_CGGAGGAA_L001_17236_1 
#>                                       "014"                                       "011" 
#> lane1_3600STDY6167839_AGGAGATT_L001_17236_1 lane1_3600STDY6167840_AGGCAGCT_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167841_ACGTTCAT_L001_17236_1 lane1_3600STDY6167842_AACGTGTG_L001_17236_1 
#>                                       "034"                                       "013" 
#> lane1_3600STDY6167843_AGACCGTG_L001_17236_1 lane1_3600STDY6167844_ACCTCTGG_L001_17236_1 
#>                                       "034"                                      "0221" 
#> lane1_3600STDY6167845_ATCCTAGG_L001_17236_1 lane1_3600STDY6167846_ATCAACCG_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167847_AGGTCACG_L001_17236_1 lane1_3600STDY6167848_ACTGTTAG_L001_17236_1 
#>                                      "0221"                                       "013" 
#> lane1_3600STDY6167849_AAGAGTAG_L001_17236_1 lane1_3600STDY6167850_ATTCGGAG_L001_17236_1 
#>                                       "013"                                       "014" 
#> lane1_3600STDY6167851_ACGCAATC_L001_17236_1 lane1_3600STDY6167852_ACAAGTGC_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167853_ATGGATCC_L001_17236_1 lane1_3600STDY6167854_AGAGGACC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167855_ATCTCCAC_L001_17236_1 lane1_3600STDY6167856_ATTGGCTA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167857_AATCCTGA_L001_17236_1 lane1_3600STDY6167858_AGGATTCA_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6167859_AACTGGCA_L001_17236_1 lane1_3600STDY6167860_ACAACGCA_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167861_CGGAAACA_L001_17236_1 lane1_3600STDY6167862_AATGAATT_L001_17236_1 
#>                                      "0221"                                       "014" 
#> lane1_3600STDY6167863_TAGGACCC_L001_17236_1 lane1_3600STDY6167864_TCTCAGTG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167865_CATGGGAA_L001_17236_1 lane1_3600STDY6167866_CCTAAGAT_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167867_CTCAGATA_L001_17236_1 lane1_3600STDY6167868_CCCATAGG_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167869_GCTATGAC_L001_17236_1 lane1_3600STDY6167870_GCTGTGAA_L001_17236_1 
#>                                       "011"                                      "0221" 
#> lane1_3600STDY6167871_ACCTTCAA_L001_17236_1 lane1_3600STDY6167872_ACAAAGCC_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6167873_CAAAACCG_L001_17236_1 lane1_3600STDY6167874_GCTGGACA_L001_17236_1 
#>                                      "0221"                                       "014" 
#> lane1_3600STDY6167875_AAGTCGTA_L001_17236_1 lane1_3600STDY6167876_CATCCGTA_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167877_TTGTGTCT_L001_17236_1 lane1_3600STDY6167878_TGCTCTAG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167879_ACCCAACA_L001_17236_1 lane1_3600STDY6167880_CGATCTGA_L001_17236_1 
#>                                      "0221"                                       "011" 
#> lane1_3600STDY6167881_GTTCCACG_L001_17236_1 lane1_3600STDY6167882_ACTCTTTC_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167883_TATTGGAG_L001_17236_1 lane1_3600STDY6167884_TAAACATA_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6167885_GTAAGATA_L001_17236_1 lane1_3600STDY6167886_TACCGCAA_L001_17236_1 
#>                                       "034"                                       "013" 
#> lane1_3600STDY6167887_TATCTCCT_L001_17236_1 lane1_3600STDY6167888_TGTCATCT_L001_17236_1 
#>                                       "034"                                       "011" 
#> lane1_3600STDY6167889_ATAGCTCT_L001_17236_1 lane1_3600STDY6167890_AGTCCAAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167891_TTTGGGCA_L001_17236_1 lane1_3600STDY6167892_TCTGACGC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167893_TGTCGACT_L001_17236_1 lane1_3600STDY6167894_GTCACGTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167895_TTGAGCGA_L001_17236_1 lane1_3600STDY6167896_GAGACATA_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167897_GTCAAGCT_L001_17236_1 lane1_3600STDY6167898_AGCAAGTT_L001_17236_1 
#>                                       "023"                                       "034" 
#> lane1_3600STDY6167899_GACGCTCA_L001_17236_1 lane1_3600STDY6167900_ACGGCAGC_L001_17236_1 
#>                                       "011"                                       "034" 
#> lane1_3600STDY6167901_AGAACTGA_L001_17236_1 lane1_3600STDY6167902_CGCCTTTG_L001_17236_1 
#>                                       "034"                                       "011" 
#> lane1_3600STDY6167903_TAAGGTCA_L001_17236_1 lane1_3600STDY6167904_ACGTTGGC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167905_CCAGCTTA_L001_17236_1 lane1_3600STDY6167906_GAATCCTA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167907_ACTTCGTA_L001_17236_1 lane1_3600STDY6167908_TAGTCGGT_L001_17236_1 
#>                                       "013"                                      "0221" 
#> lane1_3600STDY6167909_CGCACGAG_L001_17236_1 lane1_3600STDY6167910_ACGTACTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167911_AGCGCCAA_L001_17236_1 lane1_3600STDY6167912_GCCTGCCC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167913_AGGACGAT_L001_17236_1 lane1_3600STDY6167914_CTTGACCG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167915_AGGTCTAA_L001_17236_1 lane1_3600STDY6167916_CGAGATCC_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167917_ATTAGCGG_L001_17236_1 lane1_3600STDY6167918_GCGCTGAT_L001_17236_1 
#>                                       "011"                                      "0221" 
#> lane1_3600STDY6167919_TGCTGAAC_L001_17236_1 lane1_3600STDY6167920_GAGGGCAG_L001_17236_1 
#>                                       "014"                                      "0221" 
#> lane1_3600STDY6167921_GTTTTCAC_L001_17236_1 lane1_3600STDY6167922_GAGATGCC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167923_TTGAGAAG_L001_17236_1 lane1_3600STDY6167924_GCATCCGG_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167925_GTCACCAG_L001_17236_1 lane1_3600STDY6167926_GAGGTCGC_L001_17236_1 
#>                                       "011"                                       "034" 
#> lane1_3600STDY6167927_AAGGGGTA_L001_17236_1 lane1_3600STDY6167928_TTTTACGT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167929_TTCCTACA_L001_17236_1 lane1_3600STDY6167930_AGTGTAGT_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167931_GTGGCCAA_L001_17236_1 lane1_3600STDY6167932_AAATACTC_L001_17236_1 
#>                                       "013"                                       "014" 
#> lane1_3600STDY6167933_CACCCGTC_L001_17236_1 lane1_3600STDY6167934_TCGTGGTT_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167935_ACTTGGGG_L001_17236_1 lane1_3600STDY6167936_GGCTGCTT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167937_CAGGGTCG_L001_17236_1 lane1_3600STDY6167938_CTCGTCGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167939_TCTACAGT_L001_17236_1 lane1_3600STDY6167940_CTTCTAGA_L001_17236_1 
#>                                       "011"                                       "034" 
#> lane1_3600STDY6167941_AACGGCTT_L001_17236_1 lane1_3600STDY6167942_ATAAGACT_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167943_GTTTTTCG_L001_17236_1 lane1_3600STDY6167944_ATTGGTAT_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167945_CGCCAGTA_L001_17236_1 lane1_3600STDY6167946_AAGCCGAA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167947_TGACCCAC_L001_17236_1 lane1_3600STDY6167948_ATTGCACA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167949_CTTTTGAT_L001_17236_1 lane1_3600STDY6167950_TAGCGAGA_L001_17236_1 
#>                                       "011"                                      "0221" 
#> lane1_3600STDY6167951_TTCGCAGG_L001_17236_1 lane1_3600STDY6167952_TAGTTATT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167953_TCCTCCGA_L001_17236_1 lane1_3600STDY6167954_GCGGGTCT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167955_GATTCTAT_L001_17236_1 lane1_3600STDY6167956_ATGCAAAG_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167957_GTCTGAGG_L001_17236_1 lane1_3600STDY6167958_TCTGGCGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167959_AATTTGCG_L001_17236_1 lane1_3600STDY6167960_TGGGTTGG_L001_17236_1 
#>                                       "011"                                       "034" 
#> lane1_3600STDY6167961_AGTTGAAA_L001_17236_1 lane1_3600STDY6167962_GACCGGAA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167963_GATCGAAC_L001_17236_1 lane1_3600STDY6167964_GTATAGGG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167965_GGTAAGAG_L001_17236_1 lane1_3600STDY6167966_AGTCCGAT_L001_17236_1 
#>                                      "0221"                                       "011" 
#> lane1_3600STDY6167967_ATACAGGC_L001_17236_1 lane1_3600STDY6167968_TGAGACTC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167969_ACTCAGGA_L001_17236_1 lane1_3600STDY6167970_GTGTCTGA_L001_17236_1 
#>                                       "011"                                       "034" 
#> lane1_3600STDY6167971_CTTGAATC_L001_17236_1 lane1_3600STDY6167972_CCGCATGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167973_AAGTAACA_L001_17236_1 lane1_3600STDY6167974_GTGGTACT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167975_AGCTGTGC_L001_17236_1 lane1_3600STDY6167976_TTACCTTC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167977_TCCGGGTA_L001_17236_1 lane1_3600STDY6167978_CTACGTAA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167979_TCGGACCG_L001_17236_1 lane1_3600STDY6167980_ATGCGTCG_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167981_TTCTTAGC_L001_17236_1 lane1_3600STDY6167982_TGAGTAAG_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167983_AAGTGATA_L001_17236_1 lane1_3600STDY6167984_TCGATGCG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167985_TATTCTGG_L001_17236_1 lane1_3600STDY6167986_AGCCGTGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167987_AAGCCTTC_L001_17236_1 lane1_3600STDY6167988_AGGTATCC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167989_AGGATCTC_L001_17236_1 lane1_3600STDY6167990_CTGTTTGA_L001_17236_1 
#>                                      "0221"                                       "011" 
#> lane1_3600STDY6167991_GGAATTTC_L001_17236_1 lane1_3600STDY6167992_TTGGAGCA_L001_17236_1 
#>                                       "013"                                       "034" 
#> lane1_3600STDY6167993_AAGGTCTG_L001_17236_1 lane1_3600STDY6167994_AATTAGGC_L001_17236_1 
#>                                       "034"                                       "011" 
#> lane1_3600STDY6167995_AATCGGGT_L001_17236_1 lane1_3600STDY6167996_AGGTAGAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167997_CTTATTCC_L001_17236_1 lane1_3600STDY6167998_CAGGCTCT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167999_AAAGCACG_L001_17236_1 lane1_3600STDY6168000_GTATACAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168001_GGACATAT_L001_17236_1 lane1_3600STDY6168002_CGGTTGGG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168003_GTCCGTGA_L001_17236_1 lane1_3600STDY6168004_GCCGAACC_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6168005_ACTTTACT_L001_17236_1 lane1_3600STDY6168006_GGGTCCAT_L001_17236_1 
#>                                       "034"                                       "013" 
#> lane1_3600STDY6168007_ATAACTAG_L001_17236_1 lane1_3600STDY6168008_AATAGAGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168009_TCACCATT_L001_17236_1 lane1_3600STDY6168010_CGCCTGAT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168011_GCGTGAAC_L001_17236_1 lane1_3600STDY6168012_TAAGGGTG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168013_GGTGTCGA_L001_17236_1 lane1_3600STDY6168014_CCGTTAGG_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6168015_TGGCAAAA_L001_17236_1 lane1_3600STDY6168016_CCTACCCG_L001_17236_1 
#>                                       "011"                                      "0222" 
#> lane1_3600STDY6168017_AACAGCGC_L001_17236_1 lane1_3600STDY6168018_TATACATC_L001_17236_1 
#>                                       "013"                                      "0221" 
#> lane1_3600STDY6168019_AAGCGACT_L001_17236_1 lane1_3600STDY6168020_GAAGCGCA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168021_ACCTCTAC_L001_17236_1 lane1_3600STDY6168022_GATTGCGT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168023_GCTGGTTG_L001_17236_1 lane1_3600STDY6168024_ATCGTCCT_L001_17236_1 
#>                                      "0221"                                       "011" 
#> lane1_3600STDY6168025_GGACACGG_L001_17236_1 lane1_3600STDY6168026_CGCACCTA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168027_CTTCGGCT_L001_17236_1 lane1_3600STDY6168028_CGAATCGA_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6168029_TAACAACT_L001_17236_1 lane1_3600STDY6168030_AGCTCTTT_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168031_TAATCCCT_L001_17236_1 lane1_3600STDY6168032_AGGACACT_L001_17236_1 
#>                                       "011"                                       "034" 
#> lane1_3600STDY6168033_TTACACTA_L001_17236_1 lane1_3600STDY6168034_AAACATCA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168035_CCATAGCT_L001_17236_1 lane1_3600STDY6168036_GTTATGGC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168037_ATCCCCTA_L001_17236_1 lane1_3600STDY6168038_CATACTAC_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6168039_CAATTGTT_L001_17236_1 lane1_3600STDY6168040_AAACCCGT_L001_17236_1 
#>                                       "014"                                      "0221" 
#> lane1_3600STDY6168041_CAGATTTC_L001_17236_1 lane1_3600STDY6168042_GCGTAGGT_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6168043_GGCATTCG_L001_17236_1 lane1_3600STDY6168044_TGGGGCTT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168045_CTGACTAC_L001_17236_1 lane1_3600STDY6168046_AACTTTTA_L001_17236_1 
#>                                       "011"                                       "034" 
#> lane1_3600STDY6168047_AGGGATTC_L001_17236_1 lane1_3600STDY6168048_CCGAGTAG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168049_GGGGACTA_L001_17236_1 lane1_3600STDY6168050_GGAGTTGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168051_AGCTCATC_L001_17236_1 lane1_3600STDY6168052_TAATCAAC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168053_ACTGGTCG_L001_17236_1 lane1_3600STDY6168054_GACGATTG_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168055_AGCGATGA_L001_17236_1 lane1_3600STDY6168056_GAAGAGAT_L001_17236_1 
#>                                       "011"                                       "034" 
#> lane1_3600STDY6168057_CGTATGCA_L001_17236_1 lane1_3600STDY6168058_CACGTGCG_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6168059_GCTTAAAC_L001_17236_1 lane1_3600STDY6168060_GTTCCGCA_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6168061_GTATCGTC_L001_17236_1 lane1_3600STDY6168062_GTCCTCAC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168063_GTACGGAC_L001_17236_1 lane1_3600STDY6168064_CATTTTGC_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6168065_TCCTCTCT_L001_17236_1 lane1_3600STDY6168066_AGCAACGA_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6168067_ACAGAAGA_L001_17236_1 lane1_3600STDY6168068_CGACCCTT_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6168069_CTGCCTAG_L001_17236_1 lane1_3600STDY6168070_GAGCGCAT_L001_17236_1 
#>                                      "0221"                                       "013" 
#> lane1_3600STDY6168071_AACTTATC_L001_17236_1 lane1_3600STDY6168072_CCGATGTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168073_TTACTACC_L001_17236_1 lane1_3600STDY6168074_CAAGGAGC_L001_17236_1 
#>                                       "013"                                       "014" 
#> lane1_3600STDY6168075_TGGTTGAC_L001_17236_1 lane1_3600STDY6168076_ACCTGCTG_L001_17236_1 
#>                                      "0221"                                      "0221" 
#> lane4_3600STDY6184181_ATCACGTT_L004_17480_1 lane4_3600STDY6184182_CGATGTTT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184183_TTAGGCAT_L004_17480_1 lane4_3600STDY6184184_TGACCACT_L004_17480_1 
#>                                       "032"                                       "034" 
#> lane4_3600STDY6184185_ACAGTGGT_L004_17480_1 lane4_3600STDY6184186_GCCAATGT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184187_CAGATCTG_L004_17480_1 lane4_3600STDY6184188_ACTTGATG_L004_17480_1 
#>                                       "032"                                       "021" 
#> lane4_3600STDY6184189_GATCAGCG_L004_17480_1 lane4_3600STDY6184190_TAGCTTGT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184191_GGCTACAG_L004_17480_1 lane4_3600STDY6184192_CTTGTACT_L004_17480_1 
#>                                       "032"                                       "021" 
#> lane4_3600STDY6184193_TGGTTGTT_L004_17480_1 lane4_3600STDY6184194_TCTCGGTT_L004_17480_1 
#>                                       "032"                                       "031" 
#> lane4_3600STDY6184195_TAAGCGTT_L004_17480_1 lane4_3600STDY6184196_TCCGTCTT_L004_17480_1 
#>                                       "031"                                       "034" 
#> lane4_3600STDY6184197_TGTACCTT_L004_17480_1 lane4_3600STDY6184198_TTCTGTGT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184199_TCTGCTGT_L004_17480_1 lane4_3600STDY6184200_TTGGAGGT_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184201_TCGAGCGT_L004_17480_1 lane4_3600STDY6184202_TGATACGT_L004_17480_1 
#>                                       "031"                                       "032" 
#> lane4_3600STDY6184203_TGCATAGT_L004_17480_1 lane4_3600STDY6184204_TTGACTCT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184205_TGCGATCT_L004_17480_1 lane4_3600STDY6184206_TTCCTGCT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184207_TAGTGACT_L004_17480_1 lane4_3600STDY6184208_TACAGGAT_L004_17480_1 
#>                                       "032"                                       "021" 
#> lane4_3600STDY6184209_TCCTCAAT_L004_17480_1 lane4_3600STDY6184210_TGTGGTTG_L004_17480_1 
#>                                       "032"                                       "034" 
#> lane4_3600STDY6184211_TAGTCTTG_L004_17480_1 lane4_3600STDY6184212_TTCCATTG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184213_TCGAAGTG_L004_17480_1 lane4_3600STDY6184214_TAACGCTG_L004_17480_1 
#>                                      "0221"                                       "034" 
#> lane4_3600STDY6184215_TTGGTATG_L004_17480_1 lane4_3600STDY6184216_TGAACTGG_L004_17480_1 
#>                                       "021"                                      "0222" 
#> lane4_3600STDY6184217_TACTTCGG_L004_17480_1 lane4_3600STDY6184218_TCTCACGG_L004_17480_1 
#>                                       "021"                                       "034" 
#> lane4_3600STDY6184219_TCAGGAGG_L004_17480_1 lane4_3600STDY6184220_TAAGTTCG_L004_17480_1 
#>                                       "021"                                       "034" 
#> lane4_3600STDY6184221_TCCAGTCG_L004_17480_1 lane4_3600STDY6184222_TGTATGCG_L004_17480_1 
#>                                       "034"                                       "021" 
#> lane4_3600STDY6184223_TCATTGAG_L004_17480_1 lane4_3600STDY6184224_TGGCTCAG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184225_TATGCCAG_L004_17480_1 lane4_3600STDY6184226_TCAGATTC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184227_TACTAGTC_L004_17480_1 lane4_3600STDY6184228_TTCAGCTC_L004_17480_1 
#>                                       "021"                                       "032" 
#> lane4_3600STDY6184229_TGTCTATC_L004_17480_1 lane4_3600STDY6184230_TATGTGGC_L004_17480_1 
#>                                       "032"                                       "021" 
#> lane4_3600STDY6184231_TTACTCGC_L004_17480_1 lane4_3600STDY6184232_TCGTTAGC_L004_17480_1 
#>                                       "021"                                       "034" 
#> lane4_3600STDY6184233_TACCGAGC_L004_17480_1 lane4_3600STDY6184234_TGTTCTCC_L004_17480_1 
#>                                       "034"                                       "021" 
#> lane4_3600STDY6184235_TTCGCACC_L004_17480_1 lane4_3600STDY6184236_TTGCGTAC_L004_17480_1 
#>                                       "034"                                       "034" 
#> lane4_3600STDY6184237_TCTACGAC_L004_17480_1 lane4_3600STDY6184238_TGACAGAC_L004_17480_1 
#>                                       "032"                                       "021" 
#> lane4_3600STDY6184239_TAGAACAC_L004_17480_1 lane4_3600STDY6184240_TCATCCTA_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184241_TGCTGATA_L004_17480_1 lane4_3600STDY6184242_TAGACGGA_L004_17480_1 
#>                                       "034"                                       "034" 
#> lane4_3600STDY6184243_TGTGAAGA_L004_17480_1 lane4_3600STDY6184244_TCTCTTCA_L004_17480_1 
#>                                       "034"                                       "021" 
#> lane4_3600STDY6184245_TTGTTCCA_L004_17480_1 lane4_3600STDY6184246_TGAAGCCA_L004_17480_1 
#>                                       "034"                                       "021" 
#> lane4_3600STDY6184247_TACCACCA_L004_17480_1 lane4_3600STDY6184248_TGCGTGAA_L004_17480_1 
#>                                      "0222"                                       "021" 
#> lane4_3600STDY6184249_GGTGAGTT_L004_17480_1 lane4_3600STDY6184250_GATCTCTT_L004_17480_1 
#>                                       "034"                                       "032" 
#> lane4_3600STDY6184251_GTGTCCTT_L004_17480_1 lane4_3600STDY6184252_GACGGATT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184253_GCAACATT_L004_17480_1 lane4_3600STDY6184254_GGTCGTGT_L004_17480_1 
#>                                       "034"                                       "021" 
#> lane4_3600STDY6184255_GAATCTGT_L004_17480_1 lane4_3600STDY6184256_GTACATCT_L004_17480_1 
#>                                       "034"                                       "021" 
#> lane4_3600STDY6184257_GAGGTGCT_L004_17480_1 lane4_3600STDY6184258_GCATGGCT_L004_17480_1 
#>                                       "023"                                       "021" 
#> lane4_3600STDY6184259_GTTAGCCT_L004_17480_1 lane4_3600STDY6184260_GTCGCTAT_L004_17480_1 
#>                                       "021"                                      "0222" 
#> lane4_3600STDY6184261_GGAATGAT_L004_17480_1 lane4_3600STDY6184262_GAGCCAAT_L004_17480_1 
#>                                       "023"                                       "021" 
#> lane4_3600STDY6184263_GCTCCTTG_L004_17480_1 lane4_3600STDY6184264_GTAAGGTG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184265_GAGGATGG_L004_17480_1 lane4_3600STDY6184266_GTTGTCGG_L004_17480_1 
#>                                       "021"                                       "032" 
#> lane4_3600STDY6184267_GGATTAGG_L004_17480_1 lane4_3600STDY6184268_GATAGAGG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184269_GTGTGTCG_L004_17480_1 lane4_3600STDY6184270_GCAATCCG_L004_17480_1 
#>                                       "034"                                       "023" 
#> lane4_3600STDY6184271_GACCTTAG_L004_17480_1 lane4_3600STDY6184272_GCCTGTTC_L004_17480_1 
#>                                      "0222"                                       "021" 
#> lane4_3600STDY6184273_GCACTGTC_L004_17480_1 lane4_3600STDY6184274_GCTAACTC_L004_17480_1 
#>                                       "021"                                       "034" 
#> lane4_3600STDY6184275_GATTCATC_L004_17480_1 lane4_3600STDY6184276_GTCTTGGC_L004_17480_1 
#>                                       "021"                                       "032" 
#> lane4_3600STDY6184277_GTAGAAGC_L004_17480_1 lane4_3600STDY6184278_GATGGTCC_L004_17480_1 
#>                                       "034"                                       "032" 
#> lane4_3600STDY6184279_GTGCTACC_L004_17480_1 lane4_3600STDY6184280_GCGATTAC_L004_17480_1 
#>                                       "034"                                       "021" 
#> lane4_3600STDY6184281_GGTTGGAC_L004_17480_1 lane4_3600STDY6184282_GGCACAAC_L004_17480_1 
#>                                       "034"                                      "0222" 
#> lane4_3600STDY6184283_GACACTTA_L004_17480_1 lane4_3600STDY6184284_GTGCAGTA_L004_17480_1 
#>                                       "021"                                       "034" 
#> lane4_3600STDY6184285_GGAGTCTA_L004_17480_1 lane4_3600STDY6184286_GCTATGGA_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184287_GAGTGCGA_L004_17480_1 lane4_3600STDY6184288_GTAACCGA_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184289_GGCAAGCA_L004_17480_1 lane4_3600STDY6184290_GCCTTACA_L004_17480_1 
#>                                       "034"                                       "021" 
#> lane4_3600STDY6184291_GAACGACA_L004_17480_1 lane4_3600STDY6184292_GCAGGTAA_L004_17480_1 
#>                                       "034"                                       "034" 
#> lane4_3600STDY6184293_GCGTCGAA_L004_17480_1 lane4_3600STDY6184294_CGTTCGGT_L004_17480_1 
#>                                       "034"                                      "0222" 
#> lane4_3600STDY6184295_CACCAGGT_L004_17480_1 lane4_3600STDY6184296_CTGCGAGT_L004_17480_1 
#>                                       "021"                                       "034" 
#> lane4_3600STDY6184297_CCGTATCT_L004_17480_1 lane4_3600STDY6184298_CGCTTCCT_L004_17480_1 
#>                                       "021"                                       "034" 
#> lane4_3600STDY6184299_CAAGACCT_L004_17480_1 lane4_3600STDY6184300_CACACACT_L004_17480_1 
#>                                       "021"                                       "032" 
#> lane4_3600STDY6184301_CCTAGTAT_L004_17480_1 lane4_3600STDY6184302_CCACCGAT_L004_17480_1 
#>                                       "032"                                       "034" 
#> lane4_3600STDY6184303_CTTCACAT_L004_17480_1 lane4_3600STDY6184304_CTATCATG_L004_17480_1 
#>                                       "034"                                       "034" 
#> lane4_3600STDY6184305_CATGAATG_L004_17480_1 lane4_3600STDY6184306_CCACTTGG_L004_17480_1 
#>                                       "034"                                       "021" 
#> lane4_3600STDY6184307_CTGTACGG_L004_17480_1 lane4_3600STDY6184308_CTAGATAG_L004_17480_1 
#>                                       "021"                                       "034" 
#> lane4_3600STDY6184309_CACTCGAG_L004_17480_1 lane4_3600STDY6184310_CCGACAAG_L004_17480_1 
#>                                      "0222"                                       "032" 
#> lane4_3600STDY6184311_CTTGCTTC_L004_17480_1 lane4_3600STDY6184312_CATAGGTC_L004_17480_1 
#>                                       "021"                                      "0222" 
#> lane4_3600STDY6184313_CACATTGC_L004_17480_1 lane4_3600STDY6184314_CGCTAAGC_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184315_CAACCTCC_L004_17480_1 lane4_3600STDY6184316_CAGCTGAC_L004_17480_1 
#>                                       "032"                                       "034" 
#> lane4_3600STDY6184317_CTCAAGAC_L004_17480_1 lane4_3600STDY6184318_CGTGTCAC_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184319_CCATGCAC_L004_17480_1 lane4_3600STDY6184320_CGTTACTA_L004_17480_1 
#>                                      "0222"                                       "034" 
#> lane4_3600STDY6184321_CAAGTAGA_L004_17480_1 lane4_3600STDY6184322_CTCTCTCA_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184323_CGACTGCA_L004_17480_1 lane4_3600STDY6184324_CCTGAGCA_L004_17480_1 
#>                                       "021"                                      "0222" 
#> lane4_3600STDY6184325_CAGGCTAA_L004_17480_1 lane4_3600STDY6184326_CGGAGGAA_L004_17480_1 
#>                                       "032"                                       "021" 
#> lane4_3600STDY6184327_AGGAGATT_L004_17480_1 lane4_3600STDY6184328_AGGCAGCT_L004_17480_1 
#>                                       "034"                                       "021" 
#> lane4_3600STDY6184329_ACGTTCAT_L004_17480_1 lane4_3600STDY6184330_AACGTGTG_L004_17480_1 
#>                                       "032"                                       "034" 
#> lane4_3600STDY6184331_AGACCGTG_L004_17480_1 lane4_3600STDY6184332_ACCTCTGG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184333_ATCCTAGG_L004_17480_1 lane4_3600STDY6184334_ATCAACCG_L004_17480_1 
#>                                       "034"                                       "034" 
#> lane4_3600STDY6184335_AGGTCACG_L004_17480_1 lane4_3600STDY6184336_ACTGTTAG_L004_17480_1 
#>                                       "032"                                       "021" 
#> lane4_3600STDY6184337_AAGAGTAG_L004_17480_1 lane4_3600STDY6184338_ATTCGGAG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184339_ACGCAATC_L004_17480_1 lane4_3600STDY6184340_ACAAGTGC_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184341_ATGGATCC_L004_17480_1 lane4_3600STDY6184342_AGAGGACC_L004_17480_1 
#>                                       "021"                                      "0222" 
#> lane4_3600STDY6184343_ATCTCCAC_L004_17480_1 lane4_3600STDY6184344_ATTGGCTA_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184345_AATCCTGA_L004_17480_1 lane4_3600STDY6184346_AGGATTCA_L004_17480_1 
#>                                       "032"                                      "0222" 
#> lane4_3600STDY6184347_AACTGGCA_L004_17480_1 lane4_3600STDY6184348_ACAACGCA_L004_17480_1 
#>                                      "0221"                                      "0222" 
#> lane4_3600STDY6184349_CGGAAACA_L004_17480_1 lane4_3600STDY6184350_AATGAATT_L004_17480_1 
#>                                       "032"                                       "034" 
#> lane4_3600STDY6184351_TAGGACCC_L004_17480_1 lane4_3600STDY6184352_TCTCAGTG_L004_17480_1 
#>                                       "034"                                      "0222" 
#> lane4_3600STDY6184353_CATGGGAA_L004_17480_1 lane4_3600STDY6184354_CCTAAGAT_L004_17480_1 
#>                                       "034"                                       "021" 
#> lane4_3600STDY6184355_CTCAGATA_L004_17480_1 lane4_3600STDY6184356_CCCATAGG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184357_GCTATGAC_L004_17480_1 lane4_3600STDY6184358_GCTGTGAA_L004_17480_1 
#>                                      "0222"                                      "0222" 
#> lane4_3600STDY6184359_ACCTTCAA_L004_17480_1 lane4_3600STDY6184360_ACAAAGCC_L004_17480_1 
#>                                      "0223"                                      "0221" 
#> lane4_3600STDY6184361_CAAAACCG_L004_17480_1 lane4_3600STDY6184362_GCTGGACA_L004_17480_1 
#>                                       "021"                                       "032" 
#> lane4_3600STDY6184363_AAGTCGTA_L004_17480_1 lane4_3600STDY6184364_CATCCGTA_L004_17480_1 
#>                                       "021"                                       "023" 
#> lane4_3600STDY6184365_TTGTGTCT_L004_17480_1 lane4_3600STDY6184366_TGCTCTAG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184367_ACCCAACA_L004_17480_1 lane4_3600STDY6184368_CGATCTGA_L004_17480_1 
#>                                      "0222"                                       "021" 
#> lane4_3600STDY6184369_GTTCCACG_L004_17480_1 lane4_3600STDY6184370_ACTCTTTC_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184371_TATTGGAG_L004_17480_1 lane4_3600STDY6184372_TAAACATA_L004_17480_1 
#>                                      "0221"                                      "0221" 
#> lane4_3600STDY6184373_GTAAGATA_L004_17480_1 lane4_3600STDY6184374_TACCGCAA_L004_17480_1 
#>                                      "0223"                                       "032" 
#> lane4_3600STDY6184375_TATCTCCT_L004_17480_1 lane4_3600STDY6184376_TGTCATCT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184377_ATAGCTCT_L004_17480_1 lane4_3600STDY6184378_AGTCCAAC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184379_TTTGGGCA_L004_17480_1 lane4_3600STDY6184380_TCTGACGC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184381_TGTCGACT_L004_17480_1 lane4_3600STDY6184382_GTCACGTA_L004_17480_1 
#>                                       "032"                                       "031" 
#> lane4_3600STDY6184383_TTGAGCGA_L004_17480_1 lane4_3600STDY6184384_GAGACATA_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184385_GTCAAGCT_L004_17480_1 lane4_3600STDY6184386_AGCAAGTT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184387_GACGCTCA_L004_17480_1 lane4_3600STDY6184388_ACGGCAGC_L004_17480_1 
#>                                       "034"                                       "021" 
#> lane4_3600STDY6184389_AGAACTGA_L004_17480_1 lane4_3600STDY6184390_CGCCTTTG_L004_17480_1 
#>                                       "021"                                      "0222" 
#> lane4_3600STDY6184391_TAAGGTCA_L004_17480_1 lane4_3600STDY6184392_ACGTTGGC_L004_17480_1 
#>                                      "0222"                                       "021" 
#> lane4_3600STDY6184393_CCAGCTTA_L004_17480_1 lane4_3600STDY6184394_GAATCCTA_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184395_ACTTCGTA_L004_17480_1 lane4_3600STDY6184396_TAGTCGGT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184397_CGCACGAG_L004_17480_1 lane4_3600STDY6184398_ACGTACTA_L004_17480_1 
#>                                       "034"                                       "032" 
#> lane4_3600STDY6184399_AGCGCCAA_L004_17480_1 lane4_3600STDY6184400_GCCTGCCC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184401_AGGACGAT_L004_17480_1 lane4_3600STDY6184402_CTTGACCG_L004_17480_1 
#>                                       "021"                                       "032" 
#> lane4_3600STDY6184403_AGGTCTAA_L004_17480_1 lane4_3600STDY6184404_CGAGATCC_L004_17480_1 
#>                                       "021"                                       "032" 
#> lane4_3600STDY6184405_ATTAGCGG_L004_17480_1 lane4_3600STDY6184406_GCGCTGAT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184407_TGCTGAAC_L004_17480_1 lane4_3600STDY6184408_GAGGGCAG_L004_17480_1 
#>                                       "032"                                       "021" 
#> lane4_3600STDY6184409_GTTTTCAC_L004_17480_1 lane4_3600STDY6184410_GAGATGCC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184411_TTGAGAAG_L004_17480_1 lane4_3600STDY6184412_GCATCCGG_L004_17480_1 
#>                                       "032"                                       "023" 
#> lane4_3600STDY6184413_GTCACCAG_L004_17480_1 lane4_3600STDY6184414_GAGGTCGC_L004_17480_1 
#>                                       "021"                                      "0222" 
#> lane4_3600STDY6184415_AAGGGGTA_L004_17480_1 lane4_3600STDY6184416_TTTTACGT_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184417_TTCCTACA_L004_17480_1 lane4_3600STDY6184418_AGTGTAGT_L004_17480_1 
#>                                       "032"                                       "021" 
#> lane4_3600STDY6184419_GTGGCCAA_L004_17480_1 lane4_3600STDY6184420_AAATACTC_L004_17480_1 
#>                                       "021"                                       "032" 
#> lane4_3600STDY6184421_CACCCGTC_L004_17480_1 lane4_3600STDY6184422_TCGTGGTT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184423_ACTTGGGG_L004_17480_1 lane4_3600STDY6184424_GGCTGCTT_L004_17480_1 
#>                                       "034"                                       "032" 
#> lane4_3600STDY6184425_CAGGGTCG_L004_17480_1 lane4_3600STDY6184426_CTCGTCGA_L004_17480_1 
#>                                       "032"                                       "021" 
#> lane4_3600STDY6184427_TCTACAGT_L004_17480_1 lane4_3600STDY6184428_CTTCTAGA_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184429_AACGGCTT_L004_17480_1 lane4_3600STDY6184430_ATAAGACT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184431_GTTTTTCG_L004_17480_1 lane4_3600STDY6184432_ATTGGTAT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184433_CGCCAGTA_L004_17480_1 lane4_3600STDY6184434_AAGCCGAA_L004_17480_1 
#>                                      "0223"                                       "032" 
#> lane4_3600STDY6184435_TGACCCAC_L004_17480_1 lane4_3600STDY6184436_ATTGCACA_L004_17480_1 
#>                                       "021"                                       "034" 
#> lane4_3600STDY6184437_CTTTTGAT_L004_17480_1 lane4_3600STDY6184438_TAGCGAGA_L004_17480_1 
#>                                       "021"                                      "0222" 
#> lane4_3600STDY6184439_TTCGCAGG_L004_17480_1 lane4_3600STDY6184440_TAGTTATT_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184441_TCCTCCGA_L004_17480_1 lane4_3600STDY6184442_GCGGGTCT_L004_17480_1 
#>                                       "034"                                       "021" 
#> lane4_3600STDY6184443_GATTCTAT_L004_17480_1 lane4_3600STDY6184444_ATGCAAAG_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184445_GTCTGAGG_L004_17480_1 lane4_3600STDY6184446_TCTGGCGA_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184447_AATTTGCG_L004_17480_1 lane4_3600STDY6184448_TGGGTTGG_L004_17480_1 
#>                                      "0222"                                       "023" 
#> lane4_3600STDY6184449_AGTTGAAA_L004_17480_1 lane4_3600STDY6184450_GACCGGAA_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184451_GATCGAAC_L004_17480_1 lane4_3600STDY6184452_GTATAGGG_L004_17480_1 
#>                                       "034"                                       "034" 
#> lane4_3600STDY6184453_GGTAAGAG_L004_17480_1 lane4_3600STDY6184454_AGTCCGAT_L004_17480_1 
#>                                       "034"                                       "032" 
#> lane4_3600STDY6184455_ATACAGGC_L004_17480_1 lane4_3600STDY6184456_TGAGACTC_L004_17480_1 
#>                                       "021"                                      "0222" 
#> lane4_3600STDY6184457_ACTCAGGA_L004_17480_1 lane4_3600STDY6184458_GTGTCTGA_L004_17480_1 
#>                                       "021"                                       "034" 
#> lane4_3600STDY6184459_CTTGAATC_L004_17480_1 lane4_3600STDY6184460_CCGCATGA_L004_17480_1 
#>                                       "021"                                      "0222" 
#> lane4_3600STDY6184461_AAGTAACA_L004_17480_1 lane4_3600STDY6184462_GTGGTACT_L004_17480_1 
#>                                      "0222"                                      "0222" 
#> lane4_3600STDY6184463_AGCTGTGC_L004_17480_1 lane4_3600STDY6184464_TTACCTTC_L004_17480_1 
#>                                      "0222"                                      "0222" 
#> lane4_3600STDY6184465_TCCGGGTA_L004_17480_1 lane4_3600STDY6184466_CTACGTAA_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184467_TCGGACCG_L004_17480_1 lane4_3600STDY6184468_ATGCGTCG_L004_17480_1 
#>                                       "021"                                       "032" 
#> lane4_3600STDY6184469_TTCTTAGC_L004_17480_1 lane4_3600STDY6184470_TGAGTAAG_L004_17480_1 
#>                                       "034"                                       "034" 
#> lane4_3600STDY6184471_AAGTGATA_L004_17480_1 lane4_3600STDY6184472_TCGATGCG_L004_17480_1 
#>                                       "021"                                       "034" 
#> lane4_3600STDY6184473_TATTCTGG_L004_17480_1 lane4_3600STDY6184474_AGCCGTGA_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184475_AAGCCTTC_L004_17480_1 lane4_3600STDY6184476_AGGTATCC_L004_17480_1 
#>                                       "021"                                       "034" 
#> lane4_3600STDY6184477_AGGATCTC_L004_17480_1 lane4_3600STDY6184478_CTGTTTGA_L004_17480_1 
#>                                       "032"                                       "034" 
#> lane4_3600STDY6184479_GGAATTTC_L004_17480_1 lane4_3600STDY6184480_TTGGAGCA_L004_17480_1 
#>                                       "034"                                       "021" 
#> lane4_3600STDY6184481_AAGGTCTG_L004_17480_1 lane4_3600STDY6184482_AATTAGGC_L004_17480_1 
#>                                       "034"                                       "032" 
#> lane4_3600STDY6184483_AATCGGGT_L004_17480_1 lane4_3600STDY6184484_AGGTAGAC_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184485_CTTATTCC_L004_17480_1 lane4_3600STDY6184486_CAGGCTCT_L004_17480_1 
#>                                       "034"                                      "0222" 
#> lane4_3600STDY6184487_AAAGCACG_L004_17480_1 lane4_3600STDY6184488_GTATACAC_L004_17480_1 
#>                                      "0222"                                       "021" 
#> lane4_3600STDY6184489_GGACATAT_L004_17480_1 lane4_3600STDY6184490_CGGTTGGG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184491_GTCCGTGA_L004_17480_1 lane4_3600STDY6184492_GCCGAACC_L004_17480_1 
#>                                       "021"                                       "034" 
#> lane4_3600STDY6184493_ACTTTACT_L004_17480_1 lane4_3600STDY6184494_GGGTCCAT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184495_ATAACTAG_L004_17480_1 lane4_3600STDY6184496_AATAGAGA_L004_17480_1 
#>                                       "034"                                       "034" 
#> lane4_3600STDY6184497_TCACCATT_L004_17480_1 lane4_3600STDY6184498_CGCCTGAT_L004_17480_1 
#>                                       "034"                                      "0222" 
#> lane4_3600STDY6184499_GCGTGAAC_L004_17480_1 lane4_3600STDY6184500_TAAGGGTG_L004_17480_1 
#>                                       "034"                                       "021" 
#> lane4_3600STDY6184501_GGTGTCGA_L004_17480_1 lane4_3600STDY6184502_CCGTTAGG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184503_TGGCAAAA_L004_17480_1 lane4_3600STDY6184504_CCTACCCG_L004_17480_1 
#>                                       "021"                                      "0222" 
#> lane4_3600STDY6184505_AACAGCGC_L004_17480_1 lane4_3600STDY6184506_TATACATC_L004_17480_1 
#>                                       "021"                                       "034" 
#> lane4_3600STDY6184507_AAGCGACT_L004_17480_1 lane4_3600STDY6184508_GAAGCGCA_L004_17480_1 
#>                                       "021"                                      "0222" 
#> lane4_3600STDY6184509_ACCTCTAC_L004_17480_1 lane4_3600STDY6184510_GATTGCGT_L004_17480_1 
#>                                      "0222"                                       "023" 
#> lane4_3600STDY6184511_GCTGGTTG_L004_17480_1 lane4_3600STDY6184512_ATCGTCCT_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184513_GGACACGG_L004_17480_1 lane4_3600STDY6184514_CGCACCTA_L004_17480_1 
#>                                       "034"                                       "021" 
#> lane4_3600STDY6184515_CTTCGGCT_L004_17480_1 lane4_3600STDY6184516_CGAATCGA_L004_17480_1 
#>                                       "021"                                       "032" 
#> lane4_3600STDY6184517_TAACAACT_L004_17480_1 lane4_3600STDY6184518_AGCTCTTT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184519_TAATCCCT_L004_17480_1 lane4_3600STDY6184520_AGGACACT_L004_17480_1 
#>                                       "032"                                       "034" 
#> lane4_3600STDY6184521_TTACACTA_L004_17480_1 lane4_3600STDY6184522_AAACATCA_L004_17480_1 
#>                                       "034"                                       "021" 
#> lane4_3600STDY6184523_CCATAGCT_L004_17480_1 lane4_3600STDY6184524_GTTATGGC_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184525_ATCCCCTA_L004_17480_1 lane4_3600STDY6184526_CATACTAC_L004_17480_1 
#>                                       "034"                                       "032" 
#> lane4_3600STDY6184527_CAATTGTT_L004_17480_1 lane4_3600STDY6184528_AAACCCGT_L004_17480_1 
#>                                       "034"                                       "032" 
#> lane4_3600STDY6184529_CAGATTTC_L004_17480_1 lane4_3600STDY6184530_GCGTAGGT_L004_17480_1 
#>                                       "032"                                       "034" 
#> lane4_3600STDY6184531_GGCATTCG_L004_17480_1 lane4_3600STDY6184532_TGGGGCTT_L004_17480_1 
#>                                       "034"                                       "021" 
#> lane4_3600STDY6184533_CTGACTAC_L004_17480_1 lane4_3600STDY6184534_AACTTTTA_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184535_AGGGATTC_L004_17480_1 lane4_3600STDY6184536_CCGAGTAG_L004_17480_1 
#>                                      "0221"                                       "021" 
#> lane4_3600STDY6184537_GGGGACTA_L004_17480_1 lane4_3600STDY6184538_GGAGTTGA_L004_17480_1 
#>                                       "032"                                       "021" 
#> lane4_3600STDY6184539_AGCTCATC_L004_17480_1 lane4_3600STDY6184540_TAATCAAC_L004_17480_1 
#>                                       "021"                                       "034" 
#> lane4_3600STDY6184541_ACTGGTCG_L004_17480_1 lane4_3600STDY6184542_GACGATTG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184543_AGCGATGA_L004_17480_1 lane4_3600STDY6184544_GAAGAGAT_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184545_CGTATGCA_L004_17480_1 lane4_3600STDY6184546_CACGTGCG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184547_GCTTAAAC_L004_17480_1 lane4_3600STDY6184548_GTTCCGCA_L004_17480_1 
#>                                       "032"                                      "0221" 
#> lane4_3600STDY6184549_GTATCGTC_L004_17480_1 lane4_3600STDY6184550_GTCCTCAC_L004_17480_1 
#>                                       "034"                                       "032" 
#> lane4_3600STDY6184551_GTACGGAC_L004_17480_1 lane4_3600STDY6184552_CATTTTGC_L004_17480_1 
#>                                      "0221"                                      "0221" 
#> lane4_3600STDY6184553_TCCTCTCT_L004_17480_1 lane4_3600STDY6184554_AGCAACGA_L004_17480_1 
#>                                       "021"                                       "034" 
#> lane4_3600STDY6184555_ACAGAAGA_L004_17480_1 lane4_3600STDY6184556_CGACCCTT_L004_17480_1 
#>                                       "021"                                       "034" 
#> lane4_3600STDY6184557_CTGCCTAG_L004_17480_1 lane4_3600STDY6184558_GAGCGCAT_L004_17480_1 
#>                                       "021"                                      "0222" 
#> lane4_3600STDY6184559_AACTTATC_L004_17480_1 lane4_3600STDY6184560_CCGATGTA_L004_17480_1 
#>                                       "034"                                       "021" 
#> lane4_3600STDY6184561_TTACTACC_L004_17480_1 lane4_3600STDY6184562_CAAGGAGC_L004_17480_1 
#>                                       "034"                                      "0221" 
#> lane4_3600STDY6184563_TGGTTGAC_L004_17480_1 lane4_3600STDY6184564_ACCTGCTG_L004_17480_1 
#>                                      "0221"                                      "0221" 
#> lane1_3600STDY6183797_ATCACGTT_L001_17592_1 lane1_3600STDY6183798_CGATGTTT_L001_17592_1 
#>                                      "0221"                                       "031" 
#> lane1_3600STDY6183799_TTAGGCAT_L001_17592_1 lane1_3600STDY6183800_TGACCACT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183801_ACAGTGGT_L001_17592_1 lane1_3600STDY6183802_GCCAATGT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183803_CAGATCTG_L001_17592_1 lane1_3600STDY6183804_ACTTGATG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183805_GATCAGCG_L001_17592_1 lane1_3600STDY6183806_TAGCTTGT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183807_GGCTACAG_L001_17592_1 lane1_3600STDY6183808_CTTGTACT_L001_17592_1 
#>                                       "031"                                      "0223" 
#> lane1_3600STDY6183809_TGGTTGTT_L001_17592_1 lane1_3600STDY6183810_TCTCGGTT_L001_17592_1 
#>                                       "031"                                      "0221" 
#> lane1_3600STDY6183811_TAAGCGTT_L001_17592_1 lane1_3600STDY6183812_TCCGTCTT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183813_TGTACCTT_L001_17592_1 lane1_3600STDY6183814_TTCTGTGT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183815_TCTGCTGT_L001_17592_1 lane1_3600STDY6183816_TTGGAGGT_L001_17592_1 
#>                                       "033"                                      "0221" 
#> lane1_3600STDY6183817_TCGAGCGT_L001_17592_1 lane1_3600STDY6183818_TGATACGT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183819_TGCATAGT_L001_17592_1 lane1_3600STDY6183820_TTGACTCT_L001_17592_1 
#>                                       "031"                                      "0221" 
#> lane1_3600STDY6183821_TGCGATCT_L001_17592_1 lane1_3600STDY6183822_TTCCTGCT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183823_TAGTGACT_L001_17592_1 lane1_3600STDY6183824_TACAGGAT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183825_TCCTCAAT_L001_17592_1 lane1_3600STDY6183826_TGTGGTTG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183827_TAGTCTTG_L001_17592_1 lane1_3600STDY6183828_TTCCATTG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183829_TCGAAGTG_L001_17592_1 lane1_3600STDY6183830_TAACGCTG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183831_TTGGTATG_L001_17592_1 lane1_3600STDY6183832_TGAACTGG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183833_TACTTCGG_L001_17592_1 lane1_3600STDY6183834_TCTCACGG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183835_TCAGGAGG_L001_17592_1 lane1_3600STDY6183836_TAAGTTCG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183837_TCCAGTCG_L001_17592_1 lane1_3600STDY6183838_TGTATGCG_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183839_TCATTGAG_L001_17592_1 lane1_3600STDY6183840_TGGCTCAG_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6183841_TATGCCAG_L001_17592_1 lane1_3600STDY6183842_TCAGATTC_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6183843_TACTAGTC_L001_17592_1 lane1_3600STDY6183844_TTCAGCTC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183845_TGTCTATC_L001_17592_1 lane1_3600STDY6183846_TATGTGGC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183847_TTACTCGC_L001_17592_1 lane1_3600STDY6183848_TCGTTAGC_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183849_TACCGAGC_L001_17592_1 lane1_3600STDY6183850_TGTTCTCC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183851_TTCGCACC_L001_17592_1 lane1_3600STDY6183852_TTGCGTAC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183853_TCTACGAC_L001_17592_1 lane1_3600STDY6183854_TGACAGAC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183855_TAGAACAC_L001_17592_1 lane1_3600STDY6183856_TCATCCTA_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183857_TGCTGATA_L001_17592_1 lane1_3600STDY6183858_TAGACGGA_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6183859_TGTGAAGA_L001_17592_1 lane1_3600STDY6183860_TCTCTTCA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183861_TTGTTCCA_L001_17592_1 lane1_3600STDY6183862_TGAAGCCA_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183863_TACCACCA_L001_17592_1 lane1_3600STDY6183864_TGCGTGAA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6183865_GGTGAGTT_L001_17592_1 lane1_3600STDY6183866_GATCTCTT_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6183867_GTGTCCTT_L001_17592_1 lane1_3600STDY6183868_GACGGATT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183869_GCAACATT_L001_17592_1 lane1_3600STDY6183870_GGTCGTGT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183871_GAATCTGT_L001_17592_1 lane1_3600STDY6183872_GTACATCT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183873_GAGGTGCT_L001_17592_1 lane1_3600STDY6183874_GCATGGCT_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6183875_GTTAGCCT_L001_17592_1 lane1_3600STDY6183876_GTCGCTAT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183877_GGAATGAT_L001_17592_1 lane1_3600STDY6183878_GAGCCAAT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183879_GCTCCTTG_L001_17592_1 lane1_3600STDY6183880_GTAAGGTG_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183881_GAGGATGG_L001_17592_1 lane1_3600STDY6183882_GTTGTCGG_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183883_GGATTAGG_L001_17592_1 lane1_3600STDY6183884_GATAGAGG_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6183885_GTGTGTCG_L001_17592_1 lane1_3600STDY6183886_GCAATCCG_L001_17592_1 
#>                                       "023"                                      "0222" 
#> lane1_3600STDY6183887_GACCTTAG_L001_17592_1 lane1_3600STDY6183888_GCCTGTTC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183889_GCACTGTC_L001_17592_1 lane1_3600STDY6183890_GCTAACTC_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6183891_GATTCATC_L001_17592_1 lane1_3600STDY6183892_GTCTTGGC_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6183893_GTAGAAGC_L001_17592_1 lane1_3600STDY6183894_GATGGTCC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183895_GTGCTACC_L001_17592_1 lane1_3600STDY6183896_GCGATTAC_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183897_GGTTGGAC_L001_17592_1 lane1_3600STDY6183898_GGCACAAC_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6183899_GACACTTA_L001_17592_1 lane1_3600STDY6183900_GTGCAGTA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183901_GGAGTCTA_L001_17592_1 lane1_3600STDY6183902_GCTATGGA_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183903_GAGTGCGA_L001_17592_1 lane1_3600STDY6183904_GTAACCGA_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183905_GGCAAGCA_L001_17592_1 lane1_3600STDY6183906_GCCTTACA_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6183907_GAACGACA_L001_17592_1 lane1_3600STDY6183908_GCAGGTAA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6183909_GCGTCGAA_L001_17592_1 lane1_3600STDY6183910_CGTTCGGT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183911_CACCAGGT_L001_17592_1 lane1_3600STDY6183912_CTGCGAGT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183913_CCGTATCT_L001_17592_1 lane1_3600STDY6183914_CGCTTCCT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183915_CAAGACCT_L001_17592_1 lane1_3600STDY6183916_CACACACT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183917_CCTAGTAT_L001_17592_1 lane1_3600STDY6183918_CCACCGAT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183919_CTTCACAT_L001_17592_1 lane1_3600STDY6183920_CTATCATG_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183921_CATGAATG_L001_17592_1 lane1_3600STDY6183922_CCACTTGG_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183923_CTGTACGG_L001_17592_1 lane1_3600STDY6183924_CTAGATAG_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183925_CACTCGAG_L001_17592_1 lane1_3600STDY6183926_CCGACAAG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183927_CTTGCTTC_L001_17592_1 lane1_3600STDY6183928_CATAGGTC_L001_17592_1 
#>                                       "023"                                       "021" 
#> lane1_3600STDY6183929_CACATTGC_L001_17592_1 lane1_3600STDY6183930_CGCTAAGC_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6183931_CAACCTCC_L001_17592_1 lane1_3600STDY6183932_CAGCTGAC_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6183933_CTCAAGAC_L001_17592_1 lane1_3600STDY6183934_CGTGTCAC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183935_CCATGCAC_L001_17592_1 lane1_3600STDY6183936_CGTTACTA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183937_CAAGTAGA_L001_17592_1 lane1_3600STDY6183938_CTCTCTCA_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183939_CGACTGCA_L001_17592_1 lane1_3600STDY6183940_CCTGAGCA_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183941_CAGGCTAA_L001_17592_1 lane1_3600STDY6183942_CGGAGGAA_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183943_AGGAGATT_L001_17592_1 lane1_3600STDY6183944_AGGCAGCT_L001_17592_1 
#>                                       "031"                                       "021" 
#> lane1_3600STDY6183945_ACGTTCAT_L001_17592_1 lane1_3600STDY6183946_AACGTGTG_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183947_AGACCGTG_L001_17592_1 lane1_3600STDY6183948_ACCTCTGG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183949_ATCCTAGG_L001_17592_1 lane1_3600STDY6183950_ATCAACCG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183951_AGGTCACG_L001_17592_1 lane1_3600STDY6183952_ACTGTTAG_L001_17592_1 
#>                                       "031"                                      "0221" 
#> lane1_3600STDY6183953_AAGAGTAG_L001_17592_1 lane1_3600STDY6183954_ATTCGGAG_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6183955_ACGCAATC_L001_17592_1 lane1_3600STDY6183956_ACAAGTGC_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6183957_ATGGATCC_L001_17592_1 lane1_3600STDY6183958_AGAGGACC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183959_ATCTCCAC_L001_17592_1 lane1_3600STDY6183960_ATTGGCTA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183961_AATCCTGA_L001_17592_1 lane1_3600STDY6183962_AGGATTCA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183963_AACTGGCA_L001_17592_1 lane1_3600STDY6183964_ACAACGCA_L001_17592_1 
#>                                       "033"                                      "0223" 
#> lane1_3600STDY6183965_CGGAAACA_L001_17592_1 lane1_3600STDY6183966_AATGAATT_L001_17592_1 
#>                                      "0222"                                       "033" 
#> lane1_3600STDY6183967_TAGGACCC_L001_17592_1 lane1_3600STDY6183968_TCTCAGTG_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183969_CATGGGAA_L001_17592_1 lane1_3600STDY6183970_CCTAAGAT_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6183971_CTCAGATA_L001_17592_1 lane1_3600STDY6183972_CCCATAGG_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183973_GCTATGAC_L001_17592_1 lane1_3600STDY6183974_GCTGTGAA_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183975_ACCTTCAA_L001_17592_1 lane1_3600STDY6183976_ACAAAGCC_L001_17592_1 
#>                                       "023"                                       "021" 
#> lane1_3600STDY6183977_CAAAACCG_L001_17592_1 lane1_3600STDY6183978_GCTGGACA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183979_AAGTCGTA_L001_17592_1 lane1_3600STDY6183980_CATCCGTA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183981_TTGTGTCT_L001_17592_1 lane1_3600STDY6183982_TGCTCTAG_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183983_ACCCAACA_L001_17592_1 lane1_3600STDY6183984_CGATCTGA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183985_GTTCCACG_L001_17592_1 lane1_3600STDY6183986_ACTCTTTC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183987_TATTGGAG_L001_17592_1 lane1_3600STDY6183988_TAAACATA_L001_17592_1 
#>                                       "023"                                      "0221" 
#> lane1_3600STDY6183989_GTAAGATA_L001_17592_1 lane1_3600STDY6183990_TACCGCAA_L001_17592_1 
#>                                      "0221"                                       "031" 
#> lane1_3600STDY6183991_TATCTCCT_L001_17592_1 lane1_3600STDY6183992_TGTCATCT_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6183993_ATAGCTCT_L001_17592_1 lane1_3600STDY6183994_AGTCCAAC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183995_TTTGGGCA_L001_17592_1 lane1_3600STDY6183996_TCTGACGC_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6183997_TGTCGACT_L001_17592_1 lane1_3600STDY6183998_GTCACGTA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183999_TTGAGCGA_L001_17592_1 lane1_3600STDY6184000_GAGACATA_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6184001_GTCAAGCT_L001_17592_1 lane1_3600STDY6184002_AGCAAGTT_L001_17592_1 
#>                                      "0221"                                       "031" 
#> lane1_3600STDY6184003_GACGCTCA_L001_17592_1 lane1_3600STDY6184004_ACGGCAGC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184005_AGAACTGA_L001_17592_1 lane1_3600STDY6184006_CGCCTTTG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184007_TAAGGTCA_L001_17592_1 lane1_3600STDY6184008_ACGTTGGC_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184009_CCAGCTTA_L001_17592_1 lane1_3600STDY6184010_GAATCCTA_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184011_ACTTCGTA_L001_17592_1 lane1_3600STDY6184012_TAGTCGGT_L001_17592_1 
#>                                      "0223"                                       "031" 
#> lane1_3600STDY6184013_CGCACGAG_L001_17592_1 lane1_3600STDY6184014_ACGTACTA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184015_AGCGCCAA_L001_17592_1 lane1_3600STDY6184016_GCCTGCCC_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6184017_AGGACGAT_L001_17592_1 lane1_3600STDY6184018_CTTGACCG_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6184019_AGGTCTAA_L001_17592_1 lane1_3600STDY6184020_CGAGATCC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184021_ATTAGCGG_L001_17592_1 lane1_3600STDY6184022_GCGCTGAT_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6184023_TGCTGAAC_L001_17592_1 lane1_3600STDY6184024_GAGGGCAG_L001_17592_1 
#>                                      "0221"                                       "031" 
#> lane1_3600STDY6184025_GTTTTCAC_L001_17592_1 lane1_3600STDY6184026_GAGATGCC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184027_TTGAGAAG_L001_17592_1 lane1_3600STDY6184028_GCATCCGG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184029_GTCACCAG_L001_17592_1 lane1_3600STDY6184030_GAGGTCGC_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184031_AAGGGGTA_L001_17592_1 lane1_3600STDY6184032_TTTTACGT_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184033_TTCCTACA_L001_17592_1 lane1_3600STDY6184034_AGTGTAGT_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6184035_GTGGCCAA_L001_17592_1 lane1_3600STDY6184036_AAATACTC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184037_CACCCGTC_L001_17592_1 lane1_3600STDY6184038_TCGTGGTT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184039_ACTTGGGG_L001_17592_1 lane1_3600STDY6184040_GGCTGCTT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184041_CAGGGTCG_L001_17592_1 lane1_3600STDY6184042_CTCGTCGA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184043_TCTACAGT_L001_17592_1 lane1_3600STDY6184044_CTTCTAGA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184045_AACGGCTT_L001_17592_1 lane1_3600STDY6184046_ATAAGACT_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6184047_GTTTTTCG_L001_17592_1 lane1_3600STDY6184048_ATTGGTAT_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6184049_CGCCAGTA_L001_17592_1 lane1_3600STDY6184050_AAGCCGAA_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184051_TGACCCAC_L001_17592_1 lane1_3600STDY6184052_ATTGCACA_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6184053_CTTTTGAT_L001_17592_1 lane1_3600STDY6184054_TAGCGAGA_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184055_TTCGCAGG_L001_17592_1 lane1_3600STDY6184056_TAGTTATT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184057_TCCTCCGA_L001_17592_1 lane1_3600STDY6184058_GCGGGTCT_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6184059_GATTCTAT_L001_17592_1 lane1_3600STDY6184060_ATGCAAAG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184061_GTCTGAGG_L001_17592_1 lane1_3600STDY6184062_TCTGGCGA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184063_AATTTGCG_L001_17592_1 lane1_3600STDY6184064_TGGGTTGG_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184065_AGTTGAAA_L001_17592_1 lane1_3600STDY6184066_GACCGGAA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184067_GATCGAAC_L001_17592_1 lane1_3600STDY6184068_GTATAGGG_L001_17592_1 
#>                                      "0222"                                      "0222" 
#> lane1_3600STDY6184069_GGTAAGAG_L001_17592_1 lane1_3600STDY6184070_AGTCCGAT_L001_17592_1 
#>                                       "034"                                       "023" 
#> lane1_3600STDY6184071_ATACAGGC_L001_17592_1 lane1_3600STDY6184072_TGAGACTC_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6184073_ACTCAGGA_L001_17592_1 lane1_3600STDY6184074_GTGTCTGA_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184075_CTTGAATC_L001_17592_1 lane1_3600STDY6184076_CCGCATGA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184077_AAGTAACA_L001_17592_1 lane1_3600STDY6184078_GTGGTACT_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184079_AGCTGTGC_L001_17592_1 lane1_3600STDY6184080_TTACCTTC_L001_17592_1 
#>                                      "0222"                                       "033" 
#> lane1_3600STDY6184081_TCCGGGTA_L001_17592_1 lane1_3600STDY6184082_CTACGTAA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184083_TCGGACCG_L001_17592_1 lane1_3600STDY6184084_ATGCGTCG_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184085_TTCTTAGC_L001_17592_1 lane1_3600STDY6184086_TGAGTAAG_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184087_AAGTGATA_L001_17592_1 lane1_3600STDY6184088_TCGATGCG_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184089_TATTCTGG_L001_17592_1 lane1_3600STDY6184090_AGCCGTGA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184091_AAGCCTTC_L001_17592_1 lane1_3600STDY6184092_AGGTATCC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184093_AGGATCTC_L001_17592_1 lane1_3600STDY6184094_CTGTTTGA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184095_GGAATTTC_L001_17592_1 lane1_3600STDY6184096_TTGGAGCA_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6184097_AAGGTCTG_L001_17592_1 lane1_3600STDY6184098_AATTAGGC_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184099_AATCGGGT_L001_17592_1 lane1_3600STDY6184100_AGGTAGAC_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184101_CTTATTCC_L001_17592_1 lane1_3600STDY6184102_CAGGCTCT_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184103_AAAGCACG_L001_17592_1 lane1_3600STDY6184104_GTATACAC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184105_GGACATAT_L001_17592_1 lane1_3600STDY6184106_CGGTTGGG_L001_17592_1 
#>                                      "0222"                                       "023" 
#> lane1_3600STDY6184107_GTCCGTGA_L001_17592_1 lane1_3600STDY6184108_GCCGAACC_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184109_ACTTTACT_L001_17592_1 lane1_3600STDY6184110_GGGTCCAT_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184111_ATAACTAG_L001_17592_1 lane1_3600STDY6184112_AATAGAGA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184113_TCACCATT_L001_17592_1 lane1_3600STDY6184114_CGCCTGAT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184115_GCGTGAAC_L001_17592_1 lane1_3600STDY6184116_TAAGGGTG_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184117_GGTGTCGA_L001_17592_1 lane1_3600STDY6184118_CCGTTAGG_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184119_TGGCAAAA_L001_17592_1 lane1_3600STDY6184120_CCTACCCG_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6184121_AACAGCGC_L001_17592_1 lane1_3600STDY6184122_TATACATC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184123_AAGCGACT_L001_17592_1 lane1_3600STDY6184124_GAAGCGCA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184125_ACCTCTAC_L001_17592_1 lane1_3600STDY6184126_GATTGCGT_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184127_GCTGGTTG_L001_17592_1 lane1_3600STDY6184128_ATCGTCCT_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184129_GGACACGG_L001_17592_1 lane1_3600STDY6184130_CGCACCTA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184131_CTTCGGCT_L001_17592_1 lane1_3600STDY6184132_CGAATCGA_L001_17592_1 
#>                                       "031"                                      "0222" 
#> lane1_3600STDY6184133_TAACAACT_L001_17592_1 lane1_3600STDY6184134_AGCTCTTT_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184135_TAATCCCT_L001_17592_1 lane1_3600STDY6184136_AGGACACT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184137_TTACACTA_L001_17592_1 lane1_3600STDY6184138_AAACATCA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184139_CCATAGCT_L001_17592_1 lane1_3600STDY6184140_GTTATGGC_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184141_ATCCCCTA_L001_17592_1 lane1_3600STDY6184142_CATACTAC_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6184143_CAATTGTT_L001_17592_1 lane1_3600STDY6184144_AAACCCGT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184145_CAGATTTC_L001_17592_1 lane1_3600STDY6184146_GCGTAGGT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184147_GGCATTCG_L001_17592_1 lane1_3600STDY6184148_TGGGGCTT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184149_CTGACTAC_L001_17592_1 lane1_3600STDY6184150_AACTTTTA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184151_AGGGATTC_L001_17592_1 lane1_3600STDY6184152_CCGAGTAG_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6184153_GGGGACTA_L001_17592_1 lane1_3600STDY6184154_GGAGTTGA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184155_AGCTCATC_L001_17592_1 lane1_3600STDY6184156_TAATCAAC_L001_17592_1 
#>                                       "031"                                      "0221" 
#> lane1_3600STDY6184157_ACTGGTCG_L001_17592_1 lane1_3600STDY6184158_GACGATTG_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6184159_AGCGATGA_L001_17592_1 lane1_3600STDY6184160_GAAGAGAT_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184161_CGTATGCA_L001_17592_1 lane1_3600STDY6184162_CACGTGCG_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184163_GCTTAAAC_L001_17592_1 lane1_3600STDY6184164_GTTCCGCA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184165_GTATCGTC_L001_17592_1 lane1_3600STDY6184166_GTCCTCAC_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184167_GTACGGAC_L001_17592_1 lane1_3600STDY6184168_CATTTTGC_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6184169_TCCTCTCT_L001_17592_1 lane1_3600STDY6184170_AGCAACGA_L001_17592_1 
#>                                       "034"                                       "023" 
#> lane1_3600STDY6184171_ACAGAAGA_L001_17592_1 lane1_3600STDY6184172_CGACCCTT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184173_CTGCCTAG_L001_17592_1 lane1_3600STDY6184174_GAGCGCAT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184175_AACTTATC_L001_17592_1 lane1_3600STDY6184176_CCGATGTA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184177_TTACTACC_L001_17592_1 lane1_3600STDY6184178_CAAGGAGC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184179_TGGTTGAC_L001_17592_1 lane1_3600STDY6184180_ACCTGCTG_L001_17592_1 
#>                                       "031"                                      "0221"

show/hide code output

get_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 9665))
#> lane1_3600STDY6077864_ATCACGTT_L001_15986_1 lane1_3600STDY6077865_CGATGTTT_L001_15986_1 
#>                                       "022"                                       "022" 
#> lane1_3600STDY6077866_TTAGGCAT_L001_15986_1 lane1_3600STDY6077867_TGACCACT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077868_ACAGTGGT_L001_15986_1 lane1_3600STDY6077869_GCCAATGT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077870_CAGATCTG_L001_15986_1 lane1_3600STDY6077871_ACTTGATG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077872_GATCAGCG_L001_15986_1 lane1_3600STDY6077873_TAGCTTGT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077874_GGCTACAG_L001_15986_1 lane1_3600STDY6077875_CTTGTACT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077876_TGGTTGTT_L001_15986_1 lane1_3600STDY6077877_TCTCGGTT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077878_TAAGCGTT_L001_15986_1 lane1_3600STDY6077879_TCCGTCTT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077880_TGTACCTT_L001_15986_1 lane1_3600STDY6077881_TTCTGTGT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077882_TCTGCTGT_L001_15986_1 lane1_3600STDY6077883_TTGGAGGT_L001_15986_1 
#>                                      "0121"                                       "022" 
#> lane1_3600STDY6077884_TCGAGCGT_L001_15986_1 lane1_3600STDY6077885_TGATACGT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077886_TGCATAGT_L001_15986_1 lane1_3600STDY6077887_TTGACTCT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077888_TGCGATCT_L001_15986_1 lane1_3600STDY6077889_TTCCTGCT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077890_TAGTGACT_L001_15986_1 lane1_3600STDY6077891_TACAGGAT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077892_TCCTCAAT_L001_15986_1 lane1_3600STDY6077893_TGTGGTTG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077894_TAGTCTTG_L001_15986_1 lane1_3600STDY6077895_TTCCATTG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077896_TCGAAGTG_L001_15986_1 lane1_3600STDY6077897_TAACGCTG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077898_TTGGTATG_L001_15986_1 lane1_3600STDY6077899_TGAACTGG_L001_15986_1 
#>                                      "0121"                                       "022" 
#> lane1_3600STDY6077900_TACTTCGG_L001_15986_1 lane1_3600STDY6077901_TCTCACGG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077902_TCAGGAGG_L001_15986_1 lane1_3600STDY6077903_TAAGTTCG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077904_TCCAGTCG_L001_15986_1 lane1_3600STDY6077905_TGTATGCG_L001_15986_1 
#>                                       "022"                                      "0121" 
#> lane1_3600STDY6077906_TCATTGAG_L001_15986_1 lane1_3600STDY6077907_TGGCTCAG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077908_TATGCCAG_L001_15986_1 lane1_3600STDY6077909_TCAGATTC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077910_TACTAGTC_L001_15986_1 lane1_3600STDY6077911_TTCAGCTC_L001_15986_1 
#>                                      "0121"                                       "022" 
#> lane1_3600STDY6077912_TGTCTATC_L001_15986_1 lane1_3600STDY6077913_TATGTGGC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077914_TTACTCGC_L001_15986_1 lane1_3600STDY6077915_TCGTTAGC_L001_15986_1 
#>                                       "022"                                      "0121" 
#> lane1_3600STDY6077916_TACCGAGC_L001_15986_1 lane1_3600STDY6077917_TGTTCTCC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077918_TTCGCACC_L001_15986_1 lane1_3600STDY6077919_TTGCGTAC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077920_TCTACGAC_L001_15986_1 lane1_3600STDY6077921_TGACAGAC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077922_TAGAACAC_L001_15986_1 lane1_3600STDY6077923_TCATCCTA_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077924_TGCTGATA_L001_15986_1 lane1_3600STDY6077925_TAGACGGA_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077926_TGTGAAGA_L001_15986_1 lane1_3600STDY6077927_TCTCTTCA_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077928_TTGTTCCA_L001_15986_1 lane1_3600STDY6077929_TGAAGCCA_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077930_TACCACCA_L001_15986_1 lane1_3600STDY6077931_TGCGTGAA_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077932_GGTGAGTT_L001_15986_1 lane1_3600STDY6077933_GATCTCTT_L001_15986_1 
#>                                      "0121"                                       "022" 
#> lane1_3600STDY6077934_GTGTCCTT_L001_15986_1 lane1_3600STDY6077935_GACGGATT_L001_15986_1 
#>                                       "022"                                      "0121" 
#> lane1_3600STDY6077936_GCAACATT_L001_15986_1 lane1_3600STDY6077937_GGTCGTGT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077938_GAATCTGT_L001_15986_1 lane1_3600STDY6077939_GTACATCT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077940_GAGGTGCT_L001_15986_1 lane1_3600STDY6077941_GCATGGCT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077942_GTTAGCCT_L001_15986_1 lane1_3600STDY6077943_GTCGCTAT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077944_GGAATGAT_L001_15986_1 lane1_3600STDY6077945_GAGCCAAT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077946_GCTCCTTG_L001_15986_1 lane1_3600STDY6077947_GTAAGGTG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077948_GAGGATGG_L001_15986_1 lane1_3600STDY6077949_GTTGTCGG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077950_GGATTAGG_L001_15986_1 lane1_3600STDY6077951_GATAGAGG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077952_GTGTGTCG_L001_15986_1 lane1_3600STDY6077953_GCAATCCG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077954_GACCTTAG_L001_15986_1 lane1_3600STDY6077955_GCCTGTTC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077956_GCACTGTC_L001_15986_1 lane1_3600STDY6077957_GCTAACTC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077958_GATTCATC_L001_15986_1 lane1_3600STDY6077959_GTCTTGGC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane3_3600STDY6077960_ATCACGTT_L003_15987_1 lane3_3600STDY6077961_CGATGTTT_L003_15987_1 
#>                                       "022"                                       "022" 
#> lane3_3600STDY6077962_TTAGGCAT_L003_15987_1 lane3_3600STDY6077963_TGACCACT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077964_ACAGTGGT_L003_15987_1 lane3_3600STDY6077965_GCCAATGT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077966_CAGATCTG_L003_15987_1 lane3_3600STDY6077967_ACTTGATG_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077968_GATCAGCG_L003_15987_1 lane3_3600STDY6077969_TAGCTTGT_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6077970_GGCTACAG_L003_15987_1 lane3_3600STDY6077971_CTTGTACT_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6077972_TGGTTGTT_L003_15987_1 lane3_3600STDY6077973_TCTCGGTT_L003_15987_1 
#>                                      "0123"                                      "0122" 
#> lane3_3600STDY6077974_TAAGCGTT_L003_15987_1 lane3_3600STDY6077975_TCCGTCTT_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6077976_TGTACCTT_L003_15987_1 lane3_3600STDY6077977_TTCTGTGT_L003_15987_1 
#>                                      "0123"                                      "0122" 
#> lane3_3600STDY6077978_TCTGCTGT_L003_15987_1 lane3_3600STDY6077979_TTGGAGGT_L003_15987_1 
#>                                       "022"                                      "0122" 
#> lane3_3600STDY6077980_TCGAGCGT_L003_15987_1 lane3_3600STDY6077981_TGATACGT_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6077982_TGCATAGT_L003_15987_1 lane3_3600STDY6077983_TTGACTCT_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6077984_TGCGATCT_L003_15987_1 lane3_3600STDY6077985_TTCCTGCT_L003_15987_1 
#>                                      "0123"                                      "0122" 
#> lane3_3600STDY6077986_TAGTGACT_L003_15987_1 lane3_3600STDY6077987_TACAGGAT_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6077988_TCCTCAAT_L003_15987_1 lane3_3600STDY6077989_TGTGGTTG_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077990_TAGTCTTG_L003_15987_1 lane3_3600STDY6077991_TTCCATTG_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6077992_TCGAAGTG_L003_15987_1 lane3_3600STDY6077993_TAACGCTG_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6077994_TTGGTATG_L003_15987_1 lane3_3600STDY6077995_TGAACTGG_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6077996_TACTTCGG_L003_15987_1 lane3_3600STDY6077997_TCTCACGG_L003_15987_1 
#>                                      "0122"                                       "022" 
#> lane3_3600STDY6077998_TCAGGAGG_L003_15987_1 lane3_3600STDY6077999_TAAGTTCG_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078000_TCCAGTCG_L003_15987_1 lane3_3600STDY6078001_TGTATGCG_L003_15987_1 
#>                                      "0122"                                       "022" 
#> lane3_3600STDY6078002_TCATTGAG_L003_15987_1 lane3_3600STDY6078003_TGGCTCAG_L003_15987_1 
#>                                       "034"                                      "0122" 
#> lane3_3600STDY6078004_TATGCCAG_L003_15987_1 lane3_3600STDY6078005_TCAGATTC_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6078006_TACTAGTC_L003_15987_1 lane3_3600STDY6078007_TTCAGCTC_L003_15987_1 
#>                                      "0123"                                      "0122" 
#> lane3_3600STDY6078008_TGTCTATC_L003_15987_1 lane3_3600STDY6078009_TATGTGGC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078010_TTACTCGC_L003_15987_1 lane3_3600STDY6078011_TCGTTAGC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078012_TACCGAGC_L003_15987_1 lane3_3600STDY6078013_TGTTCTCC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078014_TTCGCACC_L003_15987_1 lane3_3600STDY6078015_TTGCGTAC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078016_TCTACGAC_L003_15987_1 lane3_3600STDY6078017_TGACAGAC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078018_TAGAACAC_L003_15987_1 lane3_3600STDY6078019_TCATCCTA_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078020_TGCTGATA_L003_15987_1 lane3_3600STDY6078021_TAGACGGA_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078022_TGTGAAGA_L003_15987_1 lane3_3600STDY6078023_TCTCTTCA_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078024_TTGTTCCA_L003_15987_1 lane3_3600STDY6078025_TGAAGCCA_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078026_TACCACCA_L003_15987_1 lane3_3600STDY6078027_TGCGTGAA_L003_15987_1 
#>                                      "0123"                                       "022" 
#> lane3_3600STDY6078028_GGTGAGTT_L003_15987_1 lane3_3600STDY6078029_GATCTCTT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078030_GTGTCCTT_L003_15987_1 lane3_3600STDY6078031_GACGGATT_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078032_GCAACATT_L003_15987_1 lane3_3600STDY6078033_GGTCGTGT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078034_GAATCTGT_L003_15987_1 lane3_3600STDY6078035_GTACATCT_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6078036_GAGGTGCT_L003_15987_1 lane3_3600STDY6078037_GCATGGCT_L003_15987_1 
#>                                      "0123"                                      "0122" 
#> lane3_3600STDY6078038_GTTAGCCT_L003_15987_1 lane3_3600STDY6078039_GTCGCTAT_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078040_GGAATGAT_L003_15987_1 lane3_3600STDY6078041_GAGCCAAT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078042_GCTCCTTG_L003_15987_1 lane3_3600STDY6078043_GTAAGGTG_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078044_GAGGATGG_L003_15987_1 lane3_3600STDY6078045_GTTGTCGG_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078046_GGATTAGG_L003_15987_1 lane3_3600STDY6078047_GATAGAGG_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078048_GTGTGTCG_L003_15987_1 lane3_3600STDY6078049_GCAATCCG_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078050_GACCTTAG_L003_15987_1 lane3_3600STDY6078051_GCCTGTTC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078052_GCACTGTC_L003_15987_1 lane3_3600STDY6078053_GCTAACTC_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6078054_GATTCATC_L003_15987_1 lane3_3600STDY6078055_GTCTTGGC_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane1_3600STDY6167693_ATCACGTT_L001_17236_1 lane1_3600STDY6167694_CGATGTTT_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167695_TTAGGCAT_L001_17236_1 lane1_3600STDY6167696_TGACCACT_L001_17236_1 
#>                                       "034"                                       "011" 
#> lane1_3600STDY6167697_ACAGTGGT_L001_17236_1 lane1_3600STDY6167698_GCCAATGT_L001_17236_1 
#>                                       "022"                                       "011" 
#> lane1_3600STDY6167699_CAGATCTG_L001_17236_1 lane1_3600STDY6167700_ACTTGATG_L001_17236_1 
#>                                       "011"                                       "022" 
#> lane1_3600STDY6167701_GATCAGCG_L001_17236_1 lane1_3600STDY6167702_TAGCTTGT_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167703_GGCTACAG_L001_17236_1 lane1_3600STDY6167704_CTTGTACT_L001_17236_1 
#>                                       "014"                                       "034" 
#> lane1_3600STDY6167705_TGGTTGTT_L001_17236_1 lane1_3600STDY6167706_TCTCGGTT_L001_17236_1 
#>                                       "014"                                       "022" 
#> lane1_3600STDY6167707_TAAGCGTT_L001_17236_1 lane1_3600STDY6167708_TCCGTCTT_L001_17236_1 
#>                                       "022"                                       "013" 
#> lane1_3600STDY6167709_TGTACCTT_L001_17236_1 lane1_3600STDY6167710_TTCTGTGT_L001_17236_1 
#>                                       "011"                                       "022" 
#> lane1_3600STDY6167711_TCTGCTGT_L001_17236_1 lane1_3600STDY6167712_TTGGAGGT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167713_TCGAGCGT_L001_17236_1 lane1_3600STDY6167714_TGATACGT_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167715_TGCATAGT_L001_17236_1 lane1_3600STDY6167716_TTGACTCT_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167717_TGCGATCT_L001_17236_1 lane1_3600STDY6167718_TTCCTGCT_L001_17236_1 
#>                                       "013"                                       "022" 
#> lane1_3600STDY6167719_TAGTGACT_L001_17236_1 lane1_3600STDY6167720_TACAGGAT_L001_17236_1 
#>                                       "034"                                       "034" 
#> lane1_3600STDY6167721_TCCTCAAT_L001_17236_1 lane1_3600STDY6167722_TGTGGTTG_L001_17236_1 
#>                                       "034"                                       "011" 
#> lane1_3600STDY6167723_TAGTCTTG_L001_17236_1 lane1_3600STDY6167724_TTCCATTG_L001_17236_1 
#>                                       "011"                                       "022" 
#> lane1_3600STDY6167725_TCGAAGTG_L001_17236_1 lane1_3600STDY6167726_TAACGCTG_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167727_TTGGTATG_L001_17236_1 lane1_3600STDY6167728_TGAACTGG_L001_17236_1 
#>                                       "013"                                      "0121" 
#> lane1_3600STDY6167729_TACTTCGG_L001_17236_1 lane1_3600STDY6167730_TCTCACGG_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167731_TCAGGAGG_L001_17236_1 lane1_3600STDY6167732_TAAGTTCG_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167733_TCCAGTCG_L001_17236_1 lane1_3600STDY6167734_TGTATGCG_L001_17236_1 
#>                                       "011"                                       "022" 
#> lane1_3600STDY6167735_TCATTGAG_L001_17236_1 lane1_3600STDY6167736_TGGCTCAG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167737_TATGCCAG_L001_17236_1 lane1_3600STDY6167738_TCAGATTC_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167739_TACTAGTC_L001_17236_1 lane1_3600STDY6167740_TTCAGCTC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167741_TGTCTATC_L001_17236_1 lane1_3600STDY6167742_TATGTGGC_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167743_TTACTCGC_L001_17236_1 lane1_3600STDY6167744_TCGTTAGC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167745_TACCGAGC_L001_17236_1 lane1_3600STDY6167746_TGTTCTCC_L001_17236_1 
#>                                       "034"                                       "011" 
#> lane1_3600STDY6167747_TTCGCACC_L001_17236_1 lane1_3600STDY6167748_TTGCGTAC_L001_17236_1 
#>                                       "034"                                       "011" 
#> lane1_3600STDY6167749_TCTACGAC_L001_17236_1 lane1_3600STDY6167750_TGACAGAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167751_TAGAACAC_L001_17236_1 lane1_3600STDY6167752_TCATCCTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167753_TGCTGATA_L001_17236_1 lane1_3600STDY6167754_TAGACGGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167755_TGTGAAGA_L001_17236_1 lane1_3600STDY6167756_TCTCTTCA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167757_TTGTTCCA_L001_17236_1 lane1_3600STDY6167758_TGAAGCCA_L001_17236_1 
#>                                       "011"                                       "022" 
#> lane1_3600STDY6167759_TACCACCA_L001_17236_1 lane1_3600STDY6167760_TGCGTGAA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167761_GGTGAGTT_L001_17236_1 lane1_3600STDY6167762_GATCTCTT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167763_GTGTCCTT_L001_17236_1 lane1_3600STDY6167764_GACGGATT_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167765_GCAACATT_L001_17236_1 lane1_3600STDY6167766_GGTCGTGT_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167767_GAATCTGT_L001_17236_1 lane1_3600STDY6167768_GTACATCT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167769_GAGGTGCT_L001_17236_1 lane1_3600STDY6167770_GCATGGCT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167771_GTTAGCCT_L001_17236_1 lane1_3600STDY6167772_GTCGCTAT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167773_GGAATGAT_L001_17236_1 lane1_3600STDY6167774_GAGCCAAT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167775_GCTCCTTG_L001_17236_1 lane1_3600STDY6167776_GTAAGGTG_L001_17236_1 
#>                                       "011"                                       "022" 
#> lane1_3600STDY6167777_GAGGATGG_L001_17236_1 lane1_3600STDY6167778_GTTGTCGG_L001_17236_1 
#>                                       "011"                                       "022" 
#> lane1_3600STDY6167779_GGATTAGG_L001_17236_1 lane1_3600STDY6167780_GATAGAGG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167781_GTGTGTCG_L001_17236_1 lane1_3600STDY6167782_GCAATCCG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167783_GACCTTAG_L001_17236_1 lane1_3600STDY6167784_GCCTGTTC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167785_GCACTGTC_L001_17236_1 lane1_3600STDY6167786_GCTAACTC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167787_GATTCATC_L001_17236_1 lane1_3600STDY6167788_GTCTTGGC_L001_17236_1 
#>                                       "011"                                       "022" 
#> lane1_3600STDY6167789_GTAGAAGC_L001_17236_1 lane1_3600STDY6167790_GATGGTCC_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167791_GTGCTACC_L001_17236_1 lane1_3600STDY6167792_GCGATTAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167793_GGTTGGAC_L001_17236_1 lane1_3600STDY6167794_GGCACAAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167795_GACACTTA_L001_17236_1 lane1_3600STDY6167796_GTGCAGTA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167797_GGAGTCTA_L001_17236_1 lane1_3600STDY6167798_GCTATGGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167799_GAGTGCGA_L001_17236_1 lane1_3600STDY6167800_GTAACCGA_L001_17236_1 
#>                                       "034"                                       "011" 
#> lane1_3600STDY6167801_GGCAAGCA_L001_17236_1 lane1_3600STDY6167802_GCCTTACA_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167803_GAACGACA_L001_17236_1 lane1_3600STDY6167804_GCAGGTAA_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167805_GCGTCGAA_L001_17236_1 lane1_3600STDY6167806_CGTTCGGT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167807_CACCAGGT_L001_17236_1 lane1_3600STDY6167808_CTGCGAGT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167809_CCGTATCT_L001_17236_1 lane1_3600STDY6167810_CGCTTCCT_L001_17236_1 
#>                                       "011"                                       "022" 
#> lane1_3600STDY6167811_CAAGACCT_L001_17236_1 lane1_3600STDY6167812_CACACACT_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167813_CCTAGTAT_L001_17236_1 lane1_3600STDY6167814_CCACCGAT_L001_17236_1 
#>                                       "022"                                       "011" 
#> lane1_3600STDY6167815_CTTCACAT_L001_17236_1 lane1_3600STDY6167816_CTATCATG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167817_CATGAATG_L001_17236_1 lane1_3600STDY6167818_CCACTTGG_L001_17236_1 
#>                                       "034"                                       "011" 
#> lane1_3600STDY6167819_CTGTACGG_L001_17236_1 lane1_3600STDY6167820_CTAGATAG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167821_CACTCGAG_L001_17236_1 lane1_3600STDY6167822_CCGACAAG_L001_17236_1 
#>                                       "034"                                       "013" 
#> lane1_3600STDY6167823_CTTGCTTC_L001_17236_1 lane1_3600STDY6167824_CATAGGTC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167825_CACATTGC_L001_17236_1 lane1_3600STDY6167826_CGCTAAGC_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167827_CAACCTCC_L001_17236_1 lane1_3600STDY6167828_CAGCTGAC_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167829_CTCAAGAC_L001_17236_1 lane1_3600STDY6167830_CGTGTCAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167831_CCATGCAC_L001_17236_1 lane1_3600STDY6167832_CGTTACTA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167833_CAAGTAGA_L001_17236_1 lane1_3600STDY6167834_CTCTCTCA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167835_CGACTGCA_L001_17236_1 lane1_3600STDY6167836_CCTGAGCA_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167837_CAGGCTAA_L001_17236_1 lane1_3600STDY6167838_CGGAGGAA_L001_17236_1 
#>                                       "014"                                       "011" 
#> lane1_3600STDY6167839_AGGAGATT_L001_17236_1 lane1_3600STDY6167840_AGGCAGCT_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167841_ACGTTCAT_L001_17236_1 lane1_3600STDY6167842_AACGTGTG_L001_17236_1 
#>                                       "034"                                       "013" 
#> lane1_3600STDY6167843_AGACCGTG_L001_17236_1 lane1_3600STDY6167844_ACCTCTGG_L001_17236_1 
#>                                       "034"                                       "022" 
#> lane1_3600STDY6167845_ATCCTAGG_L001_17236_1 lane1_3600STDY6167846_ATCAACCG_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167847_AGGTCACG_L001_17236_1 lane1_3600STDY6167848_ACTGTTAG_L001_17236_1 
#>                                       "022"                                       "013" 
#> lane1_3600STDY6167849_AAGAGTAG_L001_17236_1 lane1_3600STDY6167850_ATTCGGAG_L001_17236_1 
#>                                       "013"                                       "014" 
#> lane1_3600STDY6167851_ACGCAATC_L001_17236_1 lane1_3600STDY6167852_ACAAGTGC_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167853_ATGGATCC_L001_17236_1 lane1_3600STDY6167854_AGAGGACC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167855_ATCTCCAC_L001_17236_1 lane1_3600STDY6167856_ATTGGCTA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167857_AATCCTGA_L001_17236_1 lane1_3600STDY6167858_AGGATTCA_L001_17236_1 
#>                                       "022"                                       "022" 
#> lane1_3600STDY6167859_AACTGGCA_L001_17236_1 lane1_3600STDY6167860_ACAACGCA_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167861_CGGAAACA_L001_17236_1 lane1_3600STDY6167862_AATGAATT_L001_17236_1 
#>                                       "022"                                       "014" 
#> lane1_3600STDY6167863_TAGGACCC_L001_17236_1 lane1_3600STDY6167864_TCTCAGTG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167865_CATGGGAA_L001_17236_1 lane1_3600STDY6167866_CCTAAGAT_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167867_CTCAGATA_L001_17236_1 lane1_3600STDY6167868_CCCATAGG_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167869_GCTATGAC_L001_17236_1 lane1_3600STDY6167870_GCTGTGAA_L001_17236_1 
#>                                       "011"                                       "022" 
#> lane1_3600STDY6167871_ACCTTCAA_L001_17236_1 lane1_3600STDY6167872_ACAAAGCC_L001_17236_1 
#>                                       "022"                                       "022" 
#> lane1_3600STDY6167873_CAAAACCG_L001_17236_1 lane1_3600STDY6167874_GCTGGACA_L001_17236_1 
#>                                       "022"                                       "014" 
#> lane1_3600STDY6167875_AAGTCGTA_L001_17236_1 lane1_3600STDY6167876_CATCCGTA_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167877_TTGTGTCT_L001_17236_1 lane1_3600STDY6167878_TGCTCTAG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167879_ACCCAACA_L001_17236_1 lane1_3600STDY6167880_CGATCTGA_L001_17236_1 
#>                                       "022"                                       "011" 
#> lane1_3600STDY6167881_GTTCCACG_L001_17236_1 lane1_3600STDY6167882_ACTCTTTC_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167883_TATTGGAG_L001_17236_1 lane1_3600STDY6167884_TAAACATA_L001_17236_1 
#>                                       "022"                                       "022" 
#> lane1_3600STDY6167885_GTAAGATA_L001_17236_1 lane1_3600STDY6167886_TACCGCAA_L001_17236_1 
#>                                       "034"                                       "013" 
#> lane1_3600STDY6167887_TATCTCCT_L001_17236_1 lane1_3600STDY6167888_TGTCATCT_L001_17236_1 
#>                                       "034"                                       "011" 
#> lane1_3600STDY6167889_ATAGCTCT_L001_17236_1 lane1_3600STDY6167890_AGTCCAAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167891_TTTGGGCA_L001_17236_1 lane1_3600STDY6167892_TCTGACGC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167893_TGTCGACT_L001_17236_1 lane1_3600STDY6167894_GTCACGTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167895_TTGAGCGA_L001_17236_1 lane1_3600STDY6167896_GAGACATA_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167897_GTCAAGCT_L001_17236_1 lane1_3600STDY6167898_AGCAAGTT_L001_17236_1 
#>                                       "023"                                       "034" 
#> lane1_3600STDY6167899_GACGCTCA_L001_17236_1 lane1_3600STDY6167900_ACGGCAGC_L001_17236_1 
#>                                       "011"                                       "034" 
#> lane1_3600STDY6167901_AGAACTGA_L001_17236_1 lane1_3600STDY6167902_CGCCTTTG_L001_17236_1 
#>                                       "034"                                       "011" 
#> lane1_3600STDY6167903_TAAGGTCA_L001_17236_1 lane1_3600STDY6167904_ACGTTGGC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167905_CCAGCTTA_L001_17236_1 lane1_3600STDY6167906_GAATCCTA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167907_ACTTCGTA_L001_17236_1 lane1_3600STDY6167908_TAGTCGGT_L001_17236_1 
#>                                       "013"                                       "022" 
#> lane1_3600STDY6167909_CGCACGAG_L001_17236_1 lane1_3600STDY6167910_ACGTACTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167911_AGCGCCAA_L001_17236_1 lane1_3600STDY6167912_GCCTGCCC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167913_AGGACGAT_L001_17236_1 lane1_3600STDY6167914_CTTGACCG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167915_AGGTCTAA_L001_17236_1 lane1_3600STDY6167916_CGAGATCC_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167917_ATTAGCGG_L001_17236_1 lane1_3600STDY6167918_GCGCTGAT_L001_17236_1 
#>                                       "011"                                       "022" 
#> lane1_3600STDY6167919_TGCTGAAC_L001_17236_1 lane1_3600STDY6167920_GAGGGCAG_L001_17236_1 
#>                                       "014"                                       "022" 
#> lane1_3600STDY6167921_GTTTTCAC_L001_17236_1 lane1_3600STDY6167922_GAGATGCC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167923_TTGAGAAG_L001_17236_1 lane1_3600STDY6167924_GCATCCGG_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167925_GTCACCAG_L001_17236_1 lane1_3600STDY6167926_GAGGTCGC_L001_17236_1 
#>                                       "011"                                       "034" 
#> lane1_3600STDY6167927_AAGGGGTA_L001_17236_1 lane1_3600STDY6167928_TTTTACGT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167929_TTCCTACA_L001_17236_1 lane1_3600STDY6167930_AGTGTAGT_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167931_GTGGCCAA_L001_17236_1 lane1_3600STDY6167932_AAATACTC_L001_17236_1 
#>                                       "013"                                       "014" 
#> lane1_3600STDY6167933_CACCCGTC_L001_17236_1 lane1_3600STDY6167934_TCGTGGTT_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167935_ACTTGGGG_L001_17236_1 lane1_3600STDY6167936_GGCTGCTT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167937_CAGGGTCG_L001_17236_1 lane1_3600STDY6167938_CTCGTCGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167939_TCTACAGT_L001_17236_1 lane1_3600STDY6167940_CTTCTAGA_L001_17236_1 
#>                                       "011"                                       "034" 
#> lane1_3600STDY6167941_AACGGCTT_L001_17236_1 lane1_3600STDY6167942_ATAAGACT_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167943_GTTTTTCG_L001_17236_1 lane1_3600STDY6167944_ATTGGTAT_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167945_CGCCAGTA_L001_17236_1 lane1_3600STDY6167946_AAGCCGAA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167947_TGACCCAC_L001_17236_1 lane1_3600STDY6167948_ATTGCACA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167949_CTTTTGAT_L001_17236_1 lane1_3600STDY6167950_TAGCGAGA_L001_17236_1 
#>                                       "011"                                       "022" 
#> lane1_3600STDY6167951_TTCGCAGG_L001_17236_1 lane1_3600STDY6167952_TAGTTATT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167953_TCCTCCGA_L001_17236_1 lane1_3600STDY6167954_GCGGGTCT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167955_GATTCTAT_L001_17236_1 lane1_3600STDY6167956_ATGCAAAG_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167957_GTCTGAGG_L001_17236_1 lane1_3600STDY6167958_TCTGGCGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167959_AATTTGCG_L001_17236_1 lane1_3600STDY6167960_TGGGTTGG_L001_17236_1 
#>                                       "011"                                       "034" 
#> lane1_3600STDY6167961_AGTTGAAA_L001_17236_1 lane1_3600STDY6167962_GACCGGAA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167963_GATCGAAC_L001_17236_1 lane1_3600STDY6167964_GTATAGGG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167965_GGTAAGAG_L001_17236_1 lane1_3600STDY6167966_AGTCCGAT_L001_17236_1 
#>                                       "022"                                       "011" 
#> lane1_3600STDY6167967_ATACAGGC_L001_17236_1 lane1_3600STDY6167968_TGAGACTC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167969_ACTCAGGA_L001_17236_1 lane1_3600STDY6167970_GTGTCTGA_L001_17236_1 
#>                                       "011"                                       "034" 
#> lane1_3600STDY6167971_CTTGAATC_L001_17236_1 lane1_3600STDY6167972_CCGCATGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167973_AAGTAACA_L001_17236_1 lane1_3600STDY6167974_GTGGTACT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167975_AGCTGTGC_L001_17236_1 lane1_3600STDY6167976_TTACCTTC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167977_TCCGGGTA_L001_17236_1 lane1_3600STDY6167978_CTACGTAA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167979_TCGGACCG_L001_17236_1 lane1_3600STDY6167980_ATGCGTCG_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167981_TTCTTAGC_L001_17236_1 lane1_3600STDY6167982_TGAGTAAG_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167983_AAGTGATA_L001_17236_1 lane1_3600STDY6167984_TCGATGCG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167985_TATTCTGG_L001_17236_1 lane1_3600STDY6167986_AGCCGTGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167987_AAGCCTTC_L001_17236_1 lane1_3600STDY6167988_AGGTATCC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167989_AGGATCTC_L001_17236_1 lane1_3600STDY6167990_CTGTTTGA_L001_17236_1 
#>                                       "022"                                       "011" 
#> lane1_3600STDY6167991_GGAATTTC_L001_17236_1 lane1_3600STDY6167992_TTGGAGCA_L001_17236_1 
#>                                       "013"                                       "034" 
#> lane1_3600STDY6167993_AAGGTCTG_L001_17236_1 lane1_3600STDY6167994_AATTAGGC_L001_17236_1 
#>                                       "034"                                       "011" 
#> lane1_3600STDY6167995_AATCGGGT_L001_17236_1 lane1_3600STDY6167996_AGGTAGAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167997_CTTATTCC_L001_17236_1 lane1_3600STDY6167998_CAGGCTCT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167999_AAAGCACG_L001_17236_1 lane1_3600STDY6168000_GTATACAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168001_GGACATAT_L001_17236_1 lane1_3600STDY6168002_CGGTTGGG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168003_GTCCGTGA_L001_17236_1 lane1_3600STDY6168004_GCCGAACC_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6168005_ACTTTACT_L001_17236_1 lane1_3600STDY6168006_GGGTCCAT_L001_17236_1 
#>                                       "034"                                       "013" 
#> lane1_3600STDY6168007_ATAACTAG_L001_17236_1 lane1_3600STDY6168008_AATAGAGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168009_TCACCATT_L001_17236_1 lane1_3600STDY6168010_CGCCTGAT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168011_GCGTGAAC_L001_17236_1 lane1_3600STDY6168012_TAAGGGTG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168013_GGTGTCGA_L001_17236_1 lane1_3600STDY6168014_CCGTTAGG_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6168015_TGGCAAAA_L001_17236_1 lane1_3600STDY6168016_CCTACCCG_L001_17236_1 
#>                                       "011"                                       "022" 
#> lane1_3600STDY6168017_AACAGCGC_L001_17236_1 lane1_3600STDY6168018_TATACATC_L001_17236_1 
#>                                       "013"                                       "022" 
#> lane1_3600STDY6168019_AAGCGACT_L001_17236_1 lane1_3600STDY6168020_GAAGCGCA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168021_ACCTCTAC_L001_17236_1 lane1_3600STDY6168022_GATTGCGT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168023_GCTGGTTG_L001_17236_1 lane1_3600STDY6168024_ATCGTCCT_L001_17236_1 
#>                                       "022"                                       "011" 
#> lane1_3600STDY6168025_GGACACGG_L001_17236_1 lane1_3600STDY6168026_CGCACCTA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168027_CTTCGGCT_L001_17236_1 lane1_3600STDY6168028_CGAATCGA_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6168029_TAACAACT_L001_17236_1 lane1_3600STDY6168030_AGCTCTTT_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168031_TAATCCCT_L001_17236_1 lane1_3600STDY6168032_AGGACACT_L001_17236_1 
#>                                       "011"                                       "034" 
#> lane1_3600STDY6168033_TTACACTA_L001_17236_1 lane1_3600STDY6168034_AAACATCA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168035_CCATAGCT_L001_17236_1 lane1_3600STDY6168036_GTTATGGC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168037_ATCCCCTA_L001_17236_1 lane1_3600STDY6168038_CATACTAC_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6168039_CAATTGTT_L001_17236_1 lane1_3600STDY6168040_AAACCCGT_L001_17236_1 
#>                                       "014"                                       "022" 
#> lane1_3600STDY6168041_CAGATTTC_L001_17236_1 lane1_3600STDY6168042_GCGTAGGT_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6168043_GGCATTCG_L001_17236_1 lane1_3600STDY6168044_TGGGGCTT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168045_CTGACTAC_L001_17236_1 lane1_3600STDY6168046_AACTTTTA_L001_17236_1 
#>                                       "011"                                       "034" 
#> lane1_3600STDY6168047_AGGGATTC_L001_17236_1 lane1_3600STDY6168048_CCGAGTAG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168049_GGGGACTA_L001_17236_1 lane1_3600STDY6168050_GGAGTTGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168051_AGCTCATC_L001_17236_1 lane1_3600STDY6168052_TAATCAAC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168053_ACTGGTCG_L001_17236_1 lane1_3600STDY6168054_GACGATTG_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168055_AGCGATGA_L001_17236_1 lane1_3600STDY6168056_GAAGAGAT_L001_17236_1 
#>                                       "011"                                       "034" 
#> lane1_3600STDY6168057_CGTATGCA_L001_17236_1 lane1_3600STDY6168058_CACGTGCG_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6168059_GCTTAAAC_L001_17236_1 lane1_3600STDY6168060_GTTCCGCA_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6168061_GTATCGTC_L001_17236_1 lane1_3600STDY6168062_GTCCTCAC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168063_GTACGGAC_L001_17236_1 lane1_3600STDY6168064_CATTTTGC_L001_17236_1 
#>                                       "022"                                       "022" 
#> lane1_3600STDY6168065_TCCTCTCT_L001_17236_1 lane1_3600STDY6168066_AGCAACGA_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6168067_ACAGAAGA_L001_17236_1 lane1_3600STDY6168068_CGACCCTT_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6168069_CTGCCTAG_L001_17236_1 lane1_3600STDY6168070_GAGCGCAT_L001_17236_1 
#>                                       "022"                                       "013" 
#> lane1_3600STDY6168071_AACTTATC_L001_17236_1 lane1_3600STDY6168072_CCGATGTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168073_TTACTACC_L001_17236_1 lane1_3600STDY6168074_CAAGGAGC_L001_17236_1 
#>                                       "013"                                       "014" 
#> lane1_3600STDY6168075_TGGTTGAC_L001_17236_1 lane1_3600STDY6168076_ACCTGCTG_L001_17236_1 
#>                                       "022"                                       "022" 
#> lane4_3600STDY6184181_ATCACGTT_L004_17480_1 lane4_3600STDY6184182_CGATGTTT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184183_TTAGGCAT_L004_17480_1 lane4_3600STDY6184184_TGACCACT_L004_17480_1 
#>                                       "032"                                       "034" 
#> lane4_3600STDY6184185_ACAGTGGT_L004_17480_1 lane4_3600STDY6184186_GCCAATGT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184187_CAGATCTG_L004_17480_1 lane4_3600STDY6184188_ACTTGATG_L004_17480_1 
#>                                       "032"                                       "021" 
#> lane4_3600STDY6184189_GATCAGCG_L004_17480_1 lane4_3600STDY6184190_TAGCTTGT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184191_GGCTACAG_L004_17480_1 lane4_3600STDY6184192_CTTGTACT_L004_17480_1 
#>                                       "032"                                       "021" 
#> lane4_3600STDY6184193_TGGTTGTT_L004_17480_1 lane4_3600STDY6184194_TCTCGGTT_L004_17480_1 
#>                                       "032"                                       "031" 
#> lane4_3600STDY6184195_TAAGCGTT_L004_17480_1 lane4_3600STDY6184196_TCCGTCTT_L004_17480_1 
#>                                       "031"                                       "034" 
#> lane4_3600STDY6184197_TGTACCTT_L004_17480_1 lane4_3600STDY6184198_TTCTGTGT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184199_TCTGCTGT_L004_17480_1 lane4_3600STDY6184200_TTGGAGGT_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184201_TCGAGCGT_L004_17480_1 lane4_3600STDY6184202_TGATACGT_L004_17480_1 
#>                                       "031"                                       "032" 
#> lane4_3600STDY6184203_TGCATAGT_L004_17480_1 lane4_3600STDY6184204_TTGACTCT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184205_TGCGATCT_L004_17480_1 lane4_3600STDY6184206_TTCCTGCT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184207_TAGTGACT_L004_17480_1 lane4_3600STDY6184208_TACAGGAT_L004_17480_1 
#>                                       "032"                                       "021" 
#> lane4_3600STDY6184209_TCCTCAAT_L004_17480_1 lane4_3600STDY6184210_TGTGGTTG_L004_17480_1 
#>                                       "032"                                       "034" 
#> lane4_3600STDY6184211_TAGTCTTG_L004_17480_1 lane4_3600STDY6184212_TTCCATTG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184213_TCGAAGTG_L004_17480_1 lane4_3600STDY6184214_TAACGCTG_L004_17480_1 
#>                                       "022"                                       "034" 
#> lane4_3600STDY6184215_TTGGTATG_L004_17480_1 lane4_3600STDY6184216_TGAACTGG_L004_17480_1 
#>                                       "021"                                       "022" 
#> lane4_3600STDY6184217_TACTTCGG_L004_17480_1 lane4_3600STDY6184218_TCTCACGG_L004_17480_1 
#>                                       "021"                                       "034" 
#> lane4_3600STDY6184219_TCAGGAGG_L004_17480_1 lane4_3600STDY6184220_TAAGTTCG_L004_17480_1 
#>                                       "021"                                       "034" 
#> lane4_3600STDY6184221_TCCAGTCG_L004_17480_1 lane4_3600STDY6184222_TGTATGCG_L004_17480_1 
#>                                       "034"                                       "021" 
#> lane4_3600STDY6184223_TCATTGAG_L004_17480_1 lane4_3600STDY6184224_TGGCTCAG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184225_TATGCCAG_L004_17480_1 lane4_3600STDY6184226_TCAGATTC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184227_TACTAGTC_L004_17480_1 lane4_3600STDY6184228_TTCAGCTC_L004_17480_1 
#>                                       "021"                                       "032" 
#> lane4_3600STDY6184229_TGTCTATC_L004_17480_1 lane4_3600STDY6184230_TATGTGGC_L004_17480_1 
#>                                       "032"                                       "021" 
#> lane4_3600STDY6184231_TTACTCGC_L004_17480_1 lane4_3600STDY6184232_TCGTTAGC_L004_17480_1 
#>                                       "021"                                       "034" 
#> lane4_3600STDY6184233_TACCGAGC_L004_17480_1 lane4_3600STDY6184234_TGTTCTCC_L004_17480_1 
#>                                       "034"                                       "021" 
#> lane4_3600STDY6184235_TTCGCACC_L004_17480_1 lane4_3600STDY6184236_TTGCGTAC_L004_17480_1 
#>                                       "034"                                       "034" 
#> lane4_3600STDY6184237_TCTACGAC_L004_17480_1 lane4_3600STDY6184238_TGACAGAC_L004_17480_1 
#>                                       "032"                                       "021" 
#> lane4_3600STDY6184239_TAGAACAC_L004_17480_1 lane4_3600STDY6184240_TCATCCTA_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184241_TGCTGATA_L004_17480_1 lane4_3600STDY6184242_TAGACGGA_L004_17480_1 
#>                                       "034"                                       "034" 
#> lane4_3600STDY6184243_TGTGAAGA_L004_17480_1 lane4_3600STDY6184244_TCTCTTCA_L004_17480_1 
#>                                       "034"                                       "021" 
#> lane4_3600STDY6184245_TTGTTCCA_L004_17480_1 lane4_3600STDY6184246_TGAAGCCA_L004_17480_1 
#>                                       "034"                                       "021" 
#> lane4_3600STDY6184247_TACCACCA_L004_17480_1 lane4_3600STDY6184248_TGCGTGAA_L004_17480_1 
#>                                       "022"                                       "021" 
#> lane4_3600STDY6184249_GGTGAGTT_L004_17480_1 lane4_3600STDY6184250_GATCTCTT_L004_17480_1 
#>                                       "034"                                       "032" 
#> lane4_3600STDY6184251_GTGTCCTT_L004_17480_1 lane4_3600STDY6184252_GACGGATT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184253_GCAACATT_L004_17480_1 lane4_3600STDY6184254_GGTCGTGT_L004_17480_1 
#>                                       "034"                                       "021" 
#> lane4_3600STDY6184255_GAATCTGT_L004_17480_1 lane4_3600STDY6184256_GTACATCT_L004_17480_1 
#>                                       "034"                                       "021" 
#> lane4_3600STDY6184257_GAGGTGCT_L004_17480_1 lane4_3600STDY6184258_GCATGGCT_L004_17480_1 
#>                                       "023"                                       "021" 
#> lane4_3600STDY6184259_GTTAGCCT_L004_17480_1 lane4_3600STDY6184260_GTCGCTAT_L004_17480_1 
#>                                       "021"                                       "022" 
#> lane4_3600STDY6184261_GGAATGAT_L004_17480_1 lane4_3600STDY6184262_GAGCCAAT_L004_17480_1 
#>                                       "023"                                       "021" 
#> lane4_3600STDY6184263_GCTCCTTG_L004_17480_1 lane4_3600STDY6184264_GTAAGGTG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184265_GAGGATGG_L004_17480_1 lane4_3600STDY6184266_GTTGTCGG_L004_17480_1 
#>                                       "021"                                       "032" 
#> lane4_3600STDY6184267_GGATTAGG_L004_17480_1 lane4_3600STDY6184268_GATAGAGG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184269_GTGTGTCG_L004_17480_1 lane4_3600STDY6184270_GCAATCCG_L004_17480_1 
#>                                       "034"                                       "023" 
#> lane4_3600STDY6184271_GACCTTAG_L004_17480_1 lane4_3600STDY6184272_GCCTGTTC_L004_17480_1 
#>                                       "022"                                       "021" 
#> lane4_3600STDY6184273_GCACTGTC_L004_17480_1 lane4_3600STDY6184274_GCTAACTC_L004_17480_1 
#>                                       "021"                                       "034" 
#> lane4_3600STDY6184275_GATTCATC_L004_17480_1 lane4_3600STDY6184276_GTCTTGGC_L004_17480_1 
#>                                       "021"                                       "032" 
#> lane4_3600STDY6184277_GTAGAAGC_L004_17480_1 lane4_3600STDY6184278_GATGGTCC_L004_17480_1 
#>                                       "034"                                       "032" 
#> lane4_3600STDY6184279_GTGCTACC_L004_17480_1 lane4_3600STDY6184280_GCGATTAC_L004_17480_1 
#>                                       "034"                                       "021" 
#> lane4_3600STDY6184281_GGTTGGAC_L004_17480_1 lane4_3600STDY6184282_GGCACAAC_L004_17480_1 
#>                                       "034"                                       "022" 
#> lane4_3600STDY6184283_GACACTTA_L004_17480_1 lane4_3600STDY6184284_GTGCAGTA_L004_17480_1 
#>                                       "021"                                       "034" 
#> lane4_3600STDY6184285_GGAGTCTA_L004_17480_1 lane4_3600STDY6184286_GCTATGGA_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184287_GAGTGCGA_L004_17480_1 lane4_3600STDY6184288_GTAACCGA_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184289_GGCAAGCA_L004_17480_1 lane4_3600STDY6184290_GCCTTACA_L004_17480_1 
#>                                       "034"                                       "021" 
#> lane4_3600STDY6184291_GAACGACA_L004_17480_1 lane4_3600STDY6184292_GCAGGTAA_L004_17480_1 
#>                                       "034"                                       "034" 
#> lane4_3600STDY6184293_GCGTCGAA_L004_17480_1 lane4_3600STDY6184294_CGTTCGGT_L004_17480_1 
#>                                       "034"                                       "022" 
#> lane4_3600STDY6184295_CACCAGGT_L004_17480_1 lane4_3600STDY6184296_CTGCGAGT_L004_17480_1 
#>                                       "021"                                       "034" 
#> lane4_3600STDY6184297_CCGTATCT_L004_17480_1 lane4_3600STDY6184298_CGCTTCCT_L004_17480_1 
#>                                       "021"                                       "034" 
#> lane4_3600STDY6184299_CAAGACCT_L004_17480_1 lane4_3600STDY6184300_CACACACT_L004_17480_1 
#>                                       "021"                                       "032" 
#> lane4_3600STDY6184301_CCTAGTAT_L004_17480_1 lane4_3600STDY6184302_CCACCGAT_L004_17480_1 
#>                                       "032"                                       "034" 
#> lane4_3600STDY6184303_CTTCACAT_L004_17480_1 lane4_3600STDY6184304_CTATCATG_L004_17480_1 
#>                                       "034"                                       "034" 
#> lane4_3600STDY6184305_CATGAATG_L004_17480_1 lane4_3600STDY6184306_CCACTTGG_L004_17480_1 
#>                                       "034"                                       "021" 
#> lane4_3600STDY6184307_CTGTACGG_L004_17480_1 lane4_3600STDY6184308_CTAGATAG_L004_17480_1 
#>                                       "021"                                       "034" 
#> lane4_3600STDY6184309_CACTCGAG_L004_17480_1 lane4_3600STDY6184310_CCGACAAG_L004_17480_1 
#>                                       "022"                                       "032" 
#> lane4_3600STDY6184311_CTTGCTTC_L004_17480_1 lane4_3600STDY6184312_CATAGGTC_L004_17480_1 
#>                                       "021"                                       "022" 
#> lane4_3600STDY6184313_CACATTGC_L004_17480_1 lane4_3600STDY6184314_CGCTAAGC_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184315_CAACCTCC_L004_17480_1 lane4_3600STDY6184316_CAGCTGAC_L004_17480_1 
#>                                       "032"                                       "034" 
#> lane4_3600STDY6184317_CTCAAGAC_L004_17480_1 lane4_3600STDY6184318_CGTGTCAC_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184319_CCATGCAC_L004_17480_1 lane4_3600STDY6184320_CGTTACTA_L004_17480_1 
#>                                       "022"                                       "034" 
#> lane4_3600STDY6184321_CAAGTAGA_L004_17480_1 lane4_3600STDY6184322_CTCTCTCA_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184323_CGACTGCA_L004_17480_1 lane4_3600STDY6184324_CCTGAGCA_L004_17480_1 
#>                                       "021"                                       "022" 
#> lane4_3600STDY6184325_CAGGCTAA_L004_17480_1 lane4_3600STDY6184326_CGGAGGAA_L004_17480_1 
#>                                       "032"                                       "021" 
#> lane4_3600STDY6184327_AGGAGATT_L004_17480_1 lane4_3600STDY6184328_AGGCAGCT_L004_17480_1 
#>                                       "034"                                       "021" 
#> lane4_3600STDY6184329_ACGTTCAT_L004_17480_1 lane4_3600STDY6184330_AACGTGTG_L004_17480_1 
#>                                       "032"                                       "034" 
#> lane4_3600STDY6184331_AGACCGTG_L004_17480_1 lane4_3600STDY6184332_ACCTCTGG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184333_ATCCTAGG_L004_17480_1 lane4_3600STDY6184334_ATCAACCG_L004_17480_1 
#>                                       "034"                                       "034" 
#> lane4_3600STDY6184335_AGGTCACG_L004_17480_1 lane4_3600STDY6184336_ACTGTTAG_L004_17480_1 
#>                                       "032"                                       "021" 
#> lane4_3600STDY6184337_AAGAGTAG_L004_17480_1 lane4_3600STDY6184338_ATTCGGAG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184339_ACGCAATC_L004_17480_1 lane4_3600STDY6184340_ACAAGTGC_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184341_ATGGATCC_L004_17480_1 lane4_3600STDY6184342_AGAGGACC_L004_17480_1 
#>                                       "021"                                       "022" 
#> lane4_3600STDY6184343_ATCTCCAC_L004_17480_1 lane4_3600STDY6184344_ATTGGCTA_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184345_AATCCTGA_L004_17480_1 lane4_3600STDY6184346_AGGATTCA_L004_17480_1 
#>                                       "032"                                       "022" 
#> lane4_3600STDY6184347_AACTGGCA_L004_17480_1 lane4_3600STDY6184348_ACAACGCA_L004_17480_1 
#>                                       "022"                                       "022" 
#> lane4_3600STDY6184349_CGGAAACA_L004_17480_1 lane4_3600STDY6184350_AATGAATT_L004_17480_1 
#>                                       "032"                                       "034" 
#> lane4_3600STDY6184351_TAGGACCC_L004_17480_1 lane4_3600STDY6184352_TCTCAGTG_L004_17480_1 
#>                                       "034"                                       "022" 
#> lane4_3600STDY6184353_CATGGGAA_L004_17480_1 lane4_3600STDY6184354_CCTAAGAT_L004_17480_1 
#>                                       "034"                                       "021" 
#> lane4_3600STDY6184355_CTCAGATA_L004_17480_1 lane4_3600STDY6184356_CCCATAGG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184357_GCTATGAC_L004_17480_1 lane4_3600STDY6184358_GCTGTGAA_L004_17480_1 
#>                                       "022"                                       "022" 
#> lane4_3600STDY6184359_ACCTTCAA_L004_17480_1 lane4_3600STDY6184360_ACAAAGCC_L004_17480_1 
#>                                       "022"                                       "022" 
#> lane4_3600STDY6184361_CAAAACCG_L004_17480_1 lane4_3600STDY6184362_GCTGGACA_L004_17480_1 
#>                                       "021"                                       "032" 
#> lane4_3600STDY6184363_AAGTCGTA_L004_17480_1 lane4_3600STDY6184364_CATCCGTA_L004_17480_1 
#>                                       "021"                                       "023" 
#> lane4_3600STDY6184365_TTGTGTCT_L004_17480_1 lane4_3600STDY6184366_TGCTCTAG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184367_ACCCAACA_L004_17480_1 lane4_3600STDY6184368_CGATCTGA_L004_17480_1 
#>                                       "022"                                       "021" 
#> lane4_3600STDY6184369_GTTCCACG_L004_17480_1 lane4_3600STDY6184370_ACTCTTTC_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184371_TATTGGAG_L004_17480_1 lane4_3600STDY6184372_TAAACATA_L004_17480_1 
#>                                       "022"                                       "022" 
#> lane4_3600STDY6184373_GTAAGATA_L004_17480_1 lane4_3600STDY6184374_TACCGCAA_L004_17480_1 
#>                                       "022"                                       "032" 
#> lane4_3600STDY6184375_TATCTCCT_L004_17480_1 lane4_3600STDY6184376_TGTCATCT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184377_ATAGCTCT_L004_17480_1 lane4_3600STDY6184378_AGTCCAAC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184379_TTTGGGCA_L004_17480_1 lane4_3600STDY6184380_TCTGACGC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184381_TGTCGACT_L004_17480_1 lane4_3600STDY6184382_GTCACGTA_L004_17480_1 
#>                                       "032"                                       "031" 
#> lane4_3600STDY6184383_TTGAGCGA_L004_17480_1 lane4_3600STDY6184384_GAGACATA_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184385_GTCAAGCT_L004_17480_1 lane4_3600STDY6184386_AGCAAGTT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184387_GACGCTCA_L004_17480_1 lane4_3600STDY6184388_ACGGCAGC_L004_17480_1 
#>                                       "034"                                       "021" 
#> lane4_3600STDY6184389_AGAACTGA_L004_17480_1 lane4_3600STDY6184390_CGCCTTTG_L004_17480_1 
#>                                       "021"                                       "022" 
#> lane4_3600STDY6184391_TAAGGTCA_L004_17480_1 lane4_3600STDY6184392_ACGTTGGC_L004_17480_1 
#>                                       "022"                                       "021" 
#> lane4_3600STDY6184393_CCAGCTTA_L004_17480_1 lane4_3600STDY6184394_GAATCCTA_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184395_ACTTCGTA_L004_17480_1 lane4_3600STDY6184396_TAGTCGGT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184397_CGCACGAG_L004_17480_1 lane4_3600STDY6184398_ACGTACTA_L004_17480_1 
#>                                       "034"                                       "032" 
#> lane4_3600STDY6184399_AGCGCCAA_L004_17480_1 lane4_3600STDY6184400_GCCTGCCC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184401_AGGACGAT_L004_17480_1 lane4_3600STDY6184402_CTTGACCG_L004_17480_1 
#>                                       "021"                                       "032" 
#> lane4_3600STDY6184403_AGGTCTAA_L004_17480_1 lane4_3600STDY6184404_CGAGATCC_L004_17480_1 
#>                                       "021"                                       "032" 
#> lane4_3600STDY6184405_ATTAGCGG_L004_17480_1 lane4_3600STDY6184406_GCGCTGAT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184407_TGCTGAAC_L004_17480_1 lane4_3600STDY6184408_GAGGGCAG_L004_17480_1 
#>                                       "032"                                       "021" 
#> lane4_3600STDY6184409_GTTTTCAC_L004_17480_1 lane4_3600STDY6184410_GAGATGCC_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184411_TTGAGAAG_L004_17480_1 lane4_3600STDY6184412_GCATCCGG_L004_17480_1 
#>                                       "032"                                       "023" 
#> lane4_3600STDY6184413_GTCACCAG_L004_17480_1 lane4_3600STDY6184414_GAGGTCGC_L004_17480_1 
#>                                       "021"                                       "022" 
#> lane4_3600STDY6184415_AAGGGGTA_L004_17480_1 lane4_3600STDY6184416_TTTTACGT_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184417_TTCCTACA_L004_17480_1 lane4_3600STDY6184418_AGTGTAGT_L004_17480_1 
#>                                       "032"                                       "021" 
#> lane4_3600STDY6184419_GTGGCCAA_L004_17480_1 lane4_3600STDY6184420_AAATACTC_L004_17480_1 
#>                                       "021"                                       "032" 
#> lane4_3600STDY6184421_CACCCGTC_L004_17480_1 lane4_3600STDY6184422_TCGTGGTT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184423_ACTTGGGG_L004_17480_1 lane4_3600STDY6184424_GGCTGCTT_L004_17480_1 
#>                                       "034"                                       "032" 
#> lane4_3600STDY6184425_CAGGGTCG_L004_17480_1 lane4_3600STDY6184426_CTCGTCGA_L004_17480_1 
#>                                       "032"                                       "021" 
#> lane4_3600STDY6184427_TCTACAGT_L004_17480_1 lane4_3600STDY6184428_CTTCTAGA_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184429_AACGGCTT_L004_17480_1 lane4_3600STDY6184430_ATAAGACT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184431_GTTTTTCG_L004_17480_1 lane4_3600STDY6184432_ATTGGTAT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184433_CGCCAGTA_L004_17480_1 lane4_3600STDY6184434_AAGCCGAA_L004_17480_1 
#>                                       "022"                                       "032" 
#> lane4_3600STDY6184435_TGACCCAC_L004_17480_1 lane4_3600STDY6184436_ATTGCACA_L004_17480_1 
#>                                       "021"                                       "034" 
#> lane4_3600STDY6184437_CTTTTGAT_L004_17480_1 lane4_3600STDY6184438_TAGCGAGA_L004_17480_1 
#>                                       "021"                                       "022" 
#> lane4_3600STDY6184439_TTCGCAGG_L004_17480_1 lane4_3600STDY6184440_TAGTTATT_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184441_TCCTCCGA_L004_17480_1 lane4_3600STDY6184442_GCGGGTCT_L004_17480_1 
#>                                       "034"                                       "021" 
#> lane4_3600STDY6184443_GATTCTAT_L004_17480_1 lane4_3600STDY6184444_ATGCAAAG_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184445_GTCTGAGG_L004_17480_1 lane4_3600STDY6184446_TCTGGCGA_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184447_AATTTGCG_L004_17480_1 lane4_3600STDY6184448_TGGGTTGG_L004_17480_1 
#>                                       "022"                                       "023" 
#> lane4_3600STDY6184449_AGTTGAAA_L004_17480_1 lane4_3600STDY6184450_GACCGGAA_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184451_GATCGAAC_L004_17480_1 lane4_3600STDY6184452_GTATAGGG_L004_17480_1 
#>                                       "034"                                       "034" 
#> lane4_3600STDY6184453_GGTAAGAG_L004_17480_1 lane4_3600STDY6184454_AGTCCGAT_L004_17480_1 
#>                                       "034"                                       "032" 
#> lane4_3600STDY6184455_ATACAGGC_L004_17480_1 lane4_3600STDY6184456_TGAGACTC_L004_17480_1 
#>                                       "021"                                       "022" 
#> lane4_3600STDY6184457_ACTCAGGA_L004_17480_1 lane4_3600STDY6184458_GTGTCTGA_L004_17480_1 
#>                                       "021"                                       "034" 
#> lane4_3600STDY6184459_CTTGAATC_L004_17480_1 lane4_3600STDY6184460_CCGCATGA_L004_17480_1 
#>                                       "021"                                       "022" 
#> lane4_3600STDY6184461_AAGTAACA_L004_17480_1 lane4_3600STDY6184462_GTGGTACT_L004_17480_1 
#>                                       "022"                                       "022" 
#> lane4_3600STDY6184463_AGCTGTGC_L004_17480_1 lane4_3600STDY6184464_TTACCTTC_L004_17480_1 
#>                                       "022"                                       "022" 
#> lane4_3600STDY6184465_TCCGGGTA_L004_17480_1 lane4_3600STDY6184466_CTACGTAA_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184467_TCGGACCG_L004_17480_1 lane4_3600STDY6184468_ATGCGTCG_L004_17480_1 
#>                                       "021"                                       "032" 
#> lane4_3600STDY6184469_TTCTTAGC_L004_17480_1 lane4_3600STDY6184470_TGAGTAAG_L004_17480_1 
#>                                       "034"                                       "034" 
#> lane4_3600STDY6184471_AAGTGATA_L004_17480_1 lane4_3600STDY6184472_TCGATGCG_L004_17480_1 
#>                                       "021"                                       "034" 
#> lane4_3600STDY6184473_TATTCTGG_L004_17480_1 lane4_3600STDY6184474_AGCCGTGA_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184475_AAGCCTTC_L004_17480_1 lane4_3600STDY6184476_AGGTATCC_L004_17480_1 
#>                                       "021"                                       "034" 
#> lane4_3600STDY6184477_AGGATCTC_L004_17480_1 lane4_3600STDY6184478_CTGTTTGA_L004_17480_1 
#>                                       "032"                                       "034" 
#> lane4_3600STDY6184479_GGAATTTC_L004_17480_1 lane4_3600STDY6184480_TTGGAGCA_L004_17480_1 
#>                                       "034"                                       "021" 
#> lane4_3600STDY6184481_AAGGTCTG_L004_17480_1 lane4_3600STDY6184482_AATTAGGC_L004_17480_1 
#>                                       "034"                                       "032" 
#> lane4_3600STDY6184483_AATCGGGT_L004_17480_1 lane4_3600STDY6184484_AGGTAGAC_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184485_CTTATTCC_L004_17480_1 lane4_3600STDY6184486_CAGGCTCT_L004_17480_1 
#>                                       "034"                                       "022" 
#> lane4_3600STDY6184487_AAAGCACG_L004_17480_1 lane4_3600STDY6184488_GTATACAC_L004_17480_1 
#>                                       "022"                                       "021" 
#> lane4_3600STDY6184489_GGACATAT_L004_17480_1 lane4_3600STDY6184490_CGGTTGGG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184491_GTCCGTGA_L004_17480_1 lane4_3600STDY6184492_GCCGAACC_L004_17480_1 
#>                                       "021"                                       "034" 
#> lane4_3600STDY6184493_ACTTTACT_L004_17480_1 lane4_3600STDY6184494_GGGTCCAT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184495_ATAACTAG_L004_17480_1 lane4_3600STDY6184496_AATAGAGA_L004_17480_1 
#>                                       "034"                                       "034" 
#> lane4_3600STDY6184497_TCACCATT_L004_17480_1 lane4_3600STDY6184498_CGCCTGAT_L004_17480_1 
#>                                       "034"                                       "022" 
#> lane4_3600STDY6184499_GCGTGAAC_L004_17480_1 lane4_3600STDY6184500_TAAGGGTG_L004_17480_1 
#>                                       "034"                                       "021" 
#> lane4_3600STDY6184501_GGTGTCGA_L004_17480_1 lane4_3600STDY6184502_CCGTTAGG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184503_TGGCAAAA_L004_17480_1 lane4_3600STDY6184504_CCTACCCG_L004_17480_1 
#>                                       "021"                                       "022" 
#> lane4_3600STDY6184505_AACAGCGC_L004_17480_1 lane4_3600STDY6184506_TATACATC_L004_17480_1 
#>                                       "021"                                       "034" 
#> lane4_3600STDY6184507_AAGCGACT_L004_17480_1 lane4_3600STDY6184508_GAAGCGCA_L004_17480_1 
#>                                       "021"                                       "022" 
#> lane4_3600STDY6184509_ACCTCTAC_L004_17480_1 lane4_3600STDY6184510_GATTGCGT_L004_17480_1 
#>                                       "022"                                       "023" 
#> lane4_3600STDY6184511_GCTGGTTG_L004_17480_1 lane4_3600STDY6184512_ATCGTCCT_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184513_GGACACGG_L004_17480_1 lane4_3600STDY6184514_CGCACCTA_L004_17480_1 
#>                                       "034"                                       "021" 
#> lane4_3600STDY6184515_CTTCGGCT_L004_17480_1 lane4_3600STDY6184516_CGAATCGA_L004_17480_1 
#>                                       "021"                                       "032" 
#> lane4_3600STDY6184517_TAACAACT_L004_17480_1 lane4_3600STDY6184518_AGCTCTTT_L004_17480_1 
#>                                       "032"                                       "032" 
#> lane4_3600STDY6184519_TAATCCCT_L004_17480_1 lane4_3600STDY6184520_AGGACACT_L004_17480_1 
#>                                       "032"                                       "034" 
#> lane4_3600STDY6184521_TTACACTA_L004_17480_1 lane4_3600STDY6184522_AAACATCA_L004_17480_1 
#>                                       "034"                                       "021" 
#> lane4_3600STDY6184523_CCATAGCT_L004_17480_1 lane4_3600STDY6184524_GTTATGGC_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184525_ATCCCCTA_L004_17480_1 lane4_3600STDY6184526_CATACTAC_L004_17480_1 
#>                                       "034"                                       "032" 
#> lane4_3600STDY6184527_CAATTGTT_L004_17480_1 lane4_3600STDY6184528_AAACCCGT_L004_17480_1 
#>                                       "034"                                       "032" 
#> lane4_3600STDY6184529_CAGATTTC_L004_17480_1 lane4_3600STDY6184530_GCGTAGGT_L004_17480_1 
#>                                       "032"                                       "034" 
#> lane4_3600STDY6184531_GGCATTCG_L004_17480_1 lane4_3600STDY6184532_TGGGGCTT_L004_17480_1 
#>                                       "034"                                       "021" 
#> lane4_3600STDY6184533_CTGACTAC_L004_17480_1 lane4_3600STDY6184534_AACTTTTA_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184535_AGGGATTC_L004_17480_1 lane4_3600STDY6184536_CCGAGTAG_L004_17480_1 
#>                                       "022"                                       "021" 
#> lane4_3600STDY6184537_GGGGACTA_L004_17480_1 lane4_3600STDY6184538_GGAGTTGA_L004_17480_1 
#>                                       "032"                                       "021" 
#> lane4_3600STDY6184539_AGCTCATC_L004_17480_1 lane4_3600STDY6184540_TAATCAAC_L004_17480_1 
#>                                       "021"                                       "034" 
#> lane4_3600STDY6184541_ACTGGTCG_L004_17480_1 lane4_3600STDY6184542_GACGATTG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184543_AGCGATGA_L004_17480_1 lane4_3600STDY6184544_GAAGAGAT_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184545_CGTATGCA_L004_17480_1 lane4_3600STDY6184546_CACGTGCG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184547_GCTTAAAC_L004_17480_1 lane4_3600STDY6184548_GTTCCGCA_L004_17480_1 
#>                                       "032"                                       "022" 
#> lane4_3600STDY6184549_GTATCGTC_L004_17480_1 lane4_3600STDY6184550_GTCCTCAC_L004_17480_1 
#>                                       "034"                                       "032" 
#> lane4_3600STDY6184551_GTACGGAC_L004_17480_1 lane4_3600STDY6184552_CATTTTGC_L004_17480_1 
#>                                       "022"                                       "022" 
#> lane4_3600STDY6184553_TCCTCTCT_L004_17480_1 lane4_3600STDY6184554_AGCAACGA_L004_17480_1 
#>                                       "021"                                       "034" 
#> lane4_3600STDY6184555_ACAGAAGA_L004_17480_1 lane4_3600STDY6184556_CGACCCTT_L004_17480_1 
#>                                       "021"                                       "034" 
#> lane4_3600STDY6184557_CTGCCTAG_L004_17480_1 lane4_3600STDY6184558_GAGCGCAT_L004_17480_1 
#>                                       "021"                                       "022" 
#> lane4_3600STDY6184559_AACTTATC_L004_17480_1 lane4_3600STDY6184560_CCGATGTA_L004_17480_1 
#>                                       "034"                                       "021" 
#> lane4_3600STDY6184561_TTACTACC_L004_17480_1 lane4_3600STDY6184562_CAAGGAGC_L004_17480_1 
#>                                       "034"                                       "022" 
#> lane4_3600STDY6184563_TGGTTGAC_L004_17480_1 lane4_3600STDY6184564_ACCTGCTG_L004_17480_1 
#>                                       "022"                                       "022" 
#> lane1_3600STDY6183797_ATCACGTT_L001_17592_1 lane1_3600STDY6183798_CGATGTTT_L001_17592_1 
#>                                       "022"                                       "031" 
#> lane1_3600STDY6183799_TTAGGCAT_L001_17592_1 lane1_3600STDY6183800_TGACCACT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183801_ACAGTGGT_L001_17592_1 lane1_3600STDY6183802_GCCAATGT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183803_CAGATCTG_L001_17592_1 lane1_3600STDY6183804_ACTTGATG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183805_GATCAGCG_L001_17592_1 lane1_3600STDY6183806_TAGCTTGT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183807_GGCTACAG_L001_17592_1 lane1_3600STDY6183808_CTTGTACT_L001_17592_1 
#>                                       "031"                                       "022" 
#> lane1_3600STDY6183809_TGGTTGTT_L001_17592_1 lane1_3600STDY6183810_TCTCGGTT_L001_17592_1 
#>                                       "031"                                       "022" 
#> lane1_3600STDY6183811_TAAGCGTT_L001_17592_1 lane1_3600STDY6183812_TCCGTCTT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183813_TGTACCTT_L001_17592_1 lane1_3600STDY6183814_TTCTGTGT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183815_TCTGCTGT_L001_17592_1 lane1_3600STDY6183816_TTGGAGGT_L001_17592_1 
#>                                       "033"                                       "022" 
#> lane1_3600STDY6183817_TCGAGCGT_L001_17592_1 lane1_3600STDY6183818_TGATACGT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183819_TGCATAGT_L001_17592_1 lane1_3600STDY6183820_TTGACTCT_L001_17592_1 
#>                                       "031"                                       "022" 
#> lane1_3600STDY6183821_TGCGATCT_L001_17592_1 lane1_3600STDY6183822_TTCCTGCT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183823_TAGTGACT_L001_17592_1 lane1_3600STDY6183824_TACAGGAT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183825_TCCTCAAT_L001_17592_1 lane1_3600STDY6183826_TGTGGTTG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183827_TAGTCTTG_L001_17592_1 lane1_3600STDY6183828_TTCCATTG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183829_TCGAAGTG_L001_17592_1 lane1_3600STDY6183830_TAACGCTG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183831_TTGGTATG_L001_17592_1 lane1_3600STDY6183832_TGAACTGG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183833_TACTTCGG_L001_17592_1 lane1_3600STDY6183834_TCTCACGG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183835_TCAGGAGG_L001_17592_1 lane1_3600STDY6183836_TAAGTTCG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183837_TCCAGTCG_L001_17592_1 lane1_3600STDY6183838_TGTATGCG_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183839_TCATTGAG_L001_17592_1 lane1_3600STDY6183840_TGGCTCAG_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6183841_TATGCCAG_L001_17592_1 lane1_3600STDY6183842_TCAGATTC_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6183843_TACTAGTC_L001_17592_1 lane1_3600STDY6183844_TTCAGCTC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183845_TGTCTATC_L001_17592_1 lane1_3600STDY6183846_TATGTGGC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183847_TTACTCGC_L001_17592_1 lane1_3600STDY6183848_TCGTTAGC_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183849_TACCGAGC_L001_17592_1 lane1_3600STDY6183850_TGTTCTCC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183851_TTCGCACC_L001_17592_1 lane1_3600STDY6183852_TTGCGTAC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183853_TCTACGAC_L001_17592_1 lane1_3600STDY6183854_TGACAGAC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183855_TAGAACAC_L001_17592_1 lane1_3600STDY6183856_TCATCCTA_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183857_TGCTGATA_L001_17592_1 lane1_3600STDY6183858_TAGACGGA_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6183859_TGTGAAGA_L001_17592_1 lane1_3600STDY6183860_TCTCTTCA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183861_TTGTTCCA_L001_17592_1 lane1_3600STDY6183862_TGAAGCCA_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183863_TACCACCA_L001_17592_1 lane1_3600STDY6183864_TGCGTGAA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6183865_GGTGAGTT_L001_17592_1 lane1_3600STDY6183866_GATCTCTT_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6183867_GTGTCCTT_L001_17592_1 lane1_3600STDY6183868_GACGGATT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183869_GCAACATT_L001_17592_1 lane1_3600STDY6183870_GGTCGTGT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183871_GAATCTGT_L001_17592_1 lane1_3600STDY6183872_GTACATCT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183873_GAGGTGCT_L001_17592_1 lane1_3600STDY6183874_GCATGGCT_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6183875_GTTAGCCT_L001_17592_1 lane1_3600STDY6183876_GTCGCTAT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183877_GGAATGAT_L001_17592_1 lane1_3600STDY6183878_GAGCCAAT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183879_GCTCCTTG_L001_17592_1 lane1_3600STDY6183880_GTAAGGTG_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183881_GAGGATGG_L001_17592_1 lane1_3600STDY6183882_GTTGTCGG_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183883_GGATTAGG_L001_17592_1 lane1_3600STDY6183884_GATAGAGG_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6183885_GTGTGTCG_L001_17592_1 lane1_3600STDY6183886_GCAATCCG_L001_17592_1 
#>                                       "023"                                       "022" 
#> lane1_3600STDY6183887_GACCTTAG_L001_17592_1 lane1_3600STDY6183888_GCCTGTTC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183889_GCACTGTC_L001_17592_1 lane1_3600STDY6183890_GCTAACTC_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6183891_GATTCATC_L001_17592_1 lane1_3600STDY6183892_GTCTTGGC_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6183893_GTAGAAGC_L001_17592_1 lane1_3600STDY6183894_GATGGTCC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183895_GTGCTACC_L001_17592_1 lane1_3600STDY6183896_GCGATTAC_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183897_GGTTGGAC_L001_17592_1 lane1_3600STDY6183898_GGCACAAC_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6183899_GACACTTA_L001_17592_1 lane1_3600STDY6183900_GTGCAGTA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183901_GGAGTCTA_L001_17592_1 lane1_3600STDY6183902_GCTATGGA_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183903_GAGTGCGA_L001_17592_1 lane1_3600STDY6183904_GTAACCGA_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183905_GGCAAGCA_L001_17592_1 lane1_3600STDY6183906_GCCTTACA_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6183907_GAACGACA_L001_17592_1 lane1_3600STDY6183908_GCAGGTAA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6183909_GCGTCGAA_L001_17592_1 lane1_3600STDY6183910_CGTTCGGT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183911_CACCAGGT_L001_17592_1 lane1_3600STDY6183912_CTGCGAGT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183913_CCGTATCT_L001_17592_1 lane1_3600STDY6183914_CGCTTCCT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183915_CAAGACCT_L001_17592_1 lane1_3600STDY6183916_CACACACT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183917_CCTAGTAT_L001_17592_1 lane1_3600STDY6183918_CCACCGAT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183919_CTTCACAT_L001_17592_1 lane1_3600STDY6183920_CTATCATG_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183921_CATGAATG_L001_17592_1 lane1_3600STDY6183922_CCACTTGG_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183923_CTGTACGG_L001_17592_1 lane1_3600STDY6183924_CTAGATAG_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183925_CACTCGAG_L001_17592_1 lane1_3600STDY6183926_CCGACAAG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183927_CTTGCTTC_L001_17592_1 lane1_3600STDY6183928_CATAGGTC_L001_17592_1 
#>                                       "023"                                       "021" 
#> lane1_3600STDY6183929_CACATTGC_L001_17592_1 lane1_3600STDY6183930_CGCTAAGC_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6183931_CAACCTCC_L001_17592_1 lane1_3600STDY6183932_CAGCTGAC_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6183933_CTCAAGAC_L001_17592_1 lane1_3600STDY6183934_CGTGTCAC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183935_CCATGCAC_L001_17592_1 lane1_3600STDY6183936_CGTTACTA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183937_CAAGTAGA_L001_17592_1 lane1_3600STDY6183938_CTCTCTCA_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183939_CGACTGCA_L001_17592_1 lane1_3600STDY6183940_CCTGAGCA_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183941_CAGGCTAA_L001_17592_1 lane1_3600STDY6183942_CGGAGGAA_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183943_AGGAGATT_L001_17592_1 lane1_3600STDY6183944_AGGCAGCT_L001_17592_1 
#>                                       "031"                                       "021" 
#> lane1_3600STDY6183945_ACGTTCAT_L001_17592_1 lane1_3600STDY6183946_AACGTGTG_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6183947_AGACCGTG_L001_17592_1 lane1_3600STDY6183948_ACCTCTGG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183949_ATCCTAGG_L001_17592_1 lane1_3600STDY6183950_ATCAACCG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183951_AGGTCACG_L001_17592_1 lane1_3600STDY6183952_ACTGTTAG_L001_17592_1 
#>                                       "031"                                       "022" 
#> lane1_3600STDY6183953_AAGAGTAG_L001_17592_1 lane1_3600STDY6183954_ATTCGGAG_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6183955_ACGCAATC_L001_17592_1 lane1_3600STDY6183956_ACAAGTGC_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6183957_ATGGATCC_L001_17592_1 lane1_3600STDY6183958_AGAGGACC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183959_ATCTCCAC_L001_17592_1 lane1_3600STDY6183960_ATTGGCTA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183961_AATCCTGA_L001_17592_1 lane1_3600STDY6183962_AGGATTCA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6183963_AACTGGCA_L001_17592_1 lane1_3600STDY6183964_ACAACGCA_L001_17592_1 
#>                                       "033"                                       "022" 
#> lane1_3600STDY6183965_CGGAAACA_L001_17592_1 lane1_3600STDY6183966_AATGAATT_L001_17592_1 
#>                                       "022"                                       "033" 
#> lane1_3600STDY6183967_TAGGACCC_L001_17592_1 lane1_3600STDY6183968_TCTCAGTG_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183969_CATGGGAA_L001_17592_1 lane1_3600STDY6183970_CCTAAGAT_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6183971_CTCAGATA_L001_17592_1 lane1_3600STDY6183972_CCCATAGG_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6183973_GCTATGAC_L001_17592_1 lane1_3600STDY6183974_GCTGTGAA_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6183975_ACCTTCAA_L001_17592_1 lane1_3600STDY6183976_ACAAAGCC_L001_17592_1 
#>                                       "023"                                       "021" 
#> lane1_3600STDY6183977_CAAAACCG_L001_17592_1 lane1_3600STDY6183978_GCTGGACA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183979_AAGTCGTA_L001_17592_1 lane1_3600STDY6183980_CATCCGTA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183981_TTGTGTCT_L001_17592_1 lane1_3600STDY6183982_TGCTCTAG_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183983_ACCCAACA_L001_17592_1 lane1_3600STDY6183984_CGATCTGA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183985_GTTCCACG_L001_17592_1 lane1_3600STDY6183986_ACTCTTTC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183987_TATTGGAG_L001_17592_1 lane1_3600STDY6183988_TAAACATA_L001_17592_1 
#>                                       "023"                                       "022" 
#> lane1_3600STDY6183989_GTAAGATA_L001_17592_1 lane1_3600STDY6183990_TACCGCAA_L001_17592_1 
#>                                       "022"                                       "031" 
#> lane1_3600STDY6183991_TATCTCCT_L001_17592_1 lane1_3600STDY6183992_TGTCATCT_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6183993_ATAGCTCT_L001_17592_1 lane1_3600STDY6183994_AGTCCAAC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183995_TTTGGGCA_L001_17592_1 lane1_3600STDY6183996_TCTGACGC_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6183997_TGTCGACT_L001_17592_1 lane1_3600STDY6183998_GTCACGTA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183999_TTGAGCGA_L001_17592_1 lane1_3600STDY6184000_GAGACATA_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6184001_GTCAAGCT_L001_17592_1 lane1_3600STDY6184002_AGCAAGTT_L001_17592_1 
#>                                       "022"                                       "031" 
#> lane1_3600STDY6184003_GACGCTCA_L001_17592_1 lane1_3600STDY6184004_ACGGCAGC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184005_AGAACTGA_L001_17592_1 lane1_3600STDY6184006_CGCCTTTG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184007_TAAGGTCA_L001_17592_1 lane1_3600STDY6184008_ACGTTGGC_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184009_CCAGCTTA_L001_17592_1 lane1_3600STDY6184010_GAATCCTA_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184011_ACTTCGTA_L001_17592_1 lane1_3600STDY6184012_TAGTCGGT_L001_17592_1 
#>                                       "022"                                       "031" 
#> lane1_3600STDY6184013_CGCACGAG_L001_17592_1 lane1_3600STDY6184014_ACGTACTA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184015_AGCGCCAA_L001_17592_1 lane1_3600STDY6184016_GCCTGCCC_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6184017_AGGACGAT_L001_17592_1 lane1_3600STDY6184018_CTTGACCG_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6184019_AGGTCTAA_L001_17592_1 lane1_3600STDY6184020_CGAGATCC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184021_ATTAGCGG_L001_17592_1 lane1_3600STDY6184022_GCGCTGAT_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6184023_TGCTGAAC_L001_17592_1 lane1_3600STDY6184024_GAGGGCAG_L001_17592_1 
#>                                       "022"                                       "031" 
#> lane1_3600STDY6184025_GTTTTCAC_L001_17592_1 lane1_3600STDY6184026_GAGATGCC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184027_TTGAGAAG_L001_17592_1 lane1_3600STDY6184028_GCATCCGG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184029_GTCACCAG_L001_17592_1 lane1_3600STDY6184030_GAGGTCGC_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184031_AAGGGGTA_L001_17592_1 lane1_3600STDY6184032_TTTTACGT_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184033_TTCCTACA_L001_17592_1 lane1_3600STDY6184034_AGTGTAGT_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6184035_GTGGCCAA_L001_17592_1 lane1_3600STDY6184036_AAATACTC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184037_CACCCGTC_L001_17592_1 lane1_3600STDY6184038_TCGTGGTT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184039_ACTTGGGG_L001_17592_1 lane1_3600STDY6184040_GGCTGCTT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184041_CAGGGTCG_L001_17592_1 lane1_3600STDY6184042_CTCGTCGA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184043_TCTACAGT_L001_17592_1 lane1_3600STDY6184044_CTTCTAGA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184045_AACGGCTT_L001_17592_1 lane1_3600STDY6184046_ATAAGACT_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6184047_GTTTTTCG_L001_17592_1 lane1_3600STDY6184048_ATTGGTAT_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6184049_CGCCAGTA_L001_17592_1 lane1_3600STDY6184050_AAGCCGAA_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184051_TGACCCAC_L001_17592_1 lane1_3600STDY6184052_ATTGCACA_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6184053_CTTTTGAT_L001_17592_1 lane1_3600STDY6184054_TAGCGAGA_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184055_TTCGCAGG_L001_17592_1 lane1_3600STDY6184056_TAGTTATT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184057_TCCTCCGA_L001_17592_1 lane1_3600STDY6184058_GCGGGTCT_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6184059_GATTCTAT_L001_17592_1 lane1_3600STDY6184060_ATGCAAAG_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184061_GTCTGAGG_L001_17592_1 lane1_3600STDY6184062_TCTGGCGA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184063_AATTTGCG_L001_17592_1 lane1_3600STDY6184064_TGGGTTGG_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184065_AGTTGAAA_L001_17592_1 lane1_3600STDY6184066_GACCGGAA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184067_GATCGAAC_L001_17592_1 lane1_3600STDY6184068_GTATAGGG_L001_17592_1 
#>                                       "022"                                       "022" 
#> lane1_3600STDY6184069_GGTAAGAG_L001_17592_1 lane1_3600STDY6184070_AGTCCGAT_L001_17592_1 
#>                                       "034"                                       "023" 
#> lane1_3600STDY6184071_ATACAGGC_L001_17592_1 lane1_3600STDY6184072_TGAGACTC_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6184073_ACTCAGGA_L001_17592_1 lane1_3600STDY6184074_GTGTCTGA_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184075_CTTGAATC_L001_17592_1 lane1_3600STDY6184076_CCGCATGA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184077_AAGTAACA_L001_17592_1 lane1_3600STDY6184078_GTGGTACT_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184079_AGCTGTGC_L001_17592_1 lane1_3600STDY6184080_TTACCTTC_L001_17592_1 
#>                                       "022"                                       "033" 
#> lane1_3600STDY6184081_TCCGGGTA_L001_17592_1 lane1_3600STDY6184082_CTACGTAA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184083_TCGGACCG_L001_17592_1 lane1_3600STDY6184084_ATGCGTCG_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184085_TTCTTAGC_L001_17592_1 lane1_3600STDY6184086_TGAGTAAG_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184087_AAGTGATA_L001_17592_1 lane1_3600STDY6184088_TCGATGCG_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184089_TATTCTGG_L001_17592_1 lane1_3600STDY6184090_AGCCGTGA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184091_AAGCCTTC_L001_17592_1 lane1_3600STDY6184092_AGGTATCC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184093_AGGATCTC_L001_17592_1 lane1_3600STDY6184094_CTGTTTGA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184095_GGAATTTC_L001_17592_1 lane1_3600STDY6184096_TTGGAGCA_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6184097_AAGGTCTG_L001_17592_1 lane1_3600STDY6184098_AATTAGGC_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184099_AATCGGGT_L001_17592_1 lane1_3600STDY6184100_AGGTAGAC_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184101_CTTATTCC_L001_17592_1 lane1_3600STDY6184102_CAGGCTCT_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184103_AAAGCACG_L001_17592_1 lane1_3600STDY6184104_GTATACAC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184105_GGACATAT_L001_17592_1 lane1_3600STDY6184106_CGGTTGGG_L001_17592_1 
#>                                       "022"                                       "023" 
#> lane1_3600STDY6184107_GTCCGTGA_L001_17592_1 lane1_3600STDY6184108_GCCGAACC_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184109_ACTTTACT_L001_17592_1 lane1_3600STDY6184110_GGGTCCAT_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184111_ATAACTAG_L001_17592_1 lane1_3600STDY6184112_AATAGAGA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184113_TCACCATT_L001_17592_1 lane1_3600STDY6184114_CGCCTGAT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184115_GCGTGAAC_L001_17592_1 lane1_3600STDY6184116_TAAGGGTG_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184117_GGTGTCGA_L001_17592_1 lane1_3600STDY6184118_CCGTTAGG_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184119_TGGCAAAA_L001_17592_1 lane1_3600STDY6184120_CCTACCCG_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6184121_AACAGCGC_L001_17592_1 lane1_3600STDY6184122_TATACATC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184123_AAGCGACT_L001_17592_1 lane1_3600STDY6184124_GAAGCGCA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184125_ACCTCTAC_L001_17592_1 lane1_3600STDY6184126_GATTGCGT_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184127_GCTGGTTG_L001_17592_1 lane1_3600STDY6184128_ATCGTCCT_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184129_GGACACGG_L001_17592_1 lane1_3600STDY6184130_CGCACCTA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184131_CTTCGGCT_L001_17592_1 lane1_3600STDY6184132_CGAATCGA_L001_17592_1 
#>                                       "031"                                       "022" 
#> lane1_3600STDY6184133_TAACAACT_L001_17592_1 lane1_3600STDY6184134_AGCTCTTT_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184135_TAATCCCT_L001_17592_1 lane1_3600STDY6184136_AGGACACT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184137_TTACACTA_L001_17592_1 lane1_3600STDY6184138_AAACATCA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184139_CCATAGCT_L001_17592_1 lane1_3600STDY6184140_GTTATGGC_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184141_ATCCCCTA_L001_17592_1 lane1_3600STDY6184142_CATACTAC_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6184143_CAATTGTT_L001_17592_1 lane1_3600STDY6184144_AAACCCGT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184145_CAGATTTC_L001_17592_1 lane1_3600STDY6184146_GCGTAGGT_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184147_GGCATTCG_L001_17592_1 lane1_3600STDY6184148_TGGGGCTT_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184149_CTGACTAC_L001_17592_1 lane1_3600STDY6184150_AACTTTTA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184151_AGGGATTC_L001_17592_1 lane1_3600STDY6184152_CCGAGTAG_L001_17592_1 
#>                                       "023"                                       "033" 
#> lane1_3600STDY6184153_GGGGACTA_L001_17592_1 lane1_3600STDY6184154_GGAGTTGA_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184155_AGCTCATC_L001_17592_1 lane1_3600STDY6184156_TAATCAAC_L001_17592_1 
#>                                       "031"                                       "022" 
#> lane1_3600STDY6184157_ACTGGTCG_L001_17592_1 lane1_3600STDY6184158_GACGATTG_L001_17592_1 
#>                                       "031"                                       "023" 
#> lane1_3600STDY6184159_AGCGATGA_L001_17592_1 lane1_3600STDY6184160_GAAGAGAT_L001_17592_1 
#>                                       "033"                                       "023" 
#> lane1_3600STDY6184161_CGTATGCA_L001_17592_1 lane1_3600STDY6184162_CACGTGCG_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184163_GCTTAAAC_L001_17592_1 lane1_3600STDY6184164_GTTCCGCA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184165_GTATCGTC_L001_17592_1 lane1_3600STDY6184166_GTCCTCAC_L001_17592_1 
#>                                       "033"                                       "031" 
#> lane1_3600STDY6184167_GTACGGAC_L001_17592_1 lane1_3600STDY6184168_CATTTTGC_L001_17592_1 
#>                                       "023"                                       "031" 
#> lane1_3600STDY6184169_TCCTCTCT_L001_17592_1 lane1_3600STDY6184170_AGCAACGA_L001_17592_1 
#>                                       "034"                                       "023" 
#> lane1_3600STDY6184171_ACAGAAGA_L001_17592_1 lane1_3600STDY6184172_CGACCCTT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184173_CTGCCTAG_L001_17592_1 lane1_3600STDY6184174_GAGCGCAT_L001_17592_1 
#>                                       "031"                                       "033" 
#> lane1_3600STDY6184175_AACTTATC_L001_17592_1 lane1_3600STDY6184176_CCGATGTA_L001_17592_1 
#>                                       "033"                                       "033" 
#> lane1_3600STDY6184177_TTACTACC_L001_17592_1 lane1_3600STDY6184178_CAAGGAGC_L001_17592_1 
#>                                       "031"                                       "031" 
#> lane1_3600STDY6184179_TGGTTGAC_L001_17592_1 lane1_3600STDY6184180_ACCTGCTG_L001_17592_1 
#>                                       "031"                                       "022"

show/hide code output

get_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 10425))
#> lane1_3600STDY6077864_ATCACGTT_L001_15986_1 lane1_3600STDY6077865_CGATGTTT_L001_15986_1 
#>                                       "022"                                       "022" 
#> lane1_3600STDY6077866_TTAGGCAT_L001_15986_1 lane1_3600STDY6077867_TGACCACT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077868_ACAGTGGT_L001_15986_1 lane1_3600STDY6077869_GCCAATGT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077870_CAGATCTG_L001_15986_1 lane1_3600STDY6077871_ACTTGATG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077872_GATCAGCG_L001_15986_1 lane1_3600STDY6077873_TAGCTTGT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077874_GGCTACAG_L001_15986_1 lane1_3600STDY6077875_CTTGTACT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077876_TGGTTGTT_L001_15986_1 lane1_3600STDY6077877_TCTCGGTT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077878_TAAGCGTT_L001_15986_1 lane1_3600STDY6077879_TCCGTCTT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077880_TGTACCTT_L001_15986_1 lane1_3600STDY6077881_TTCTGTGT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077882_TCTGCTGT_L001_15986_1 lane1_3600STDY6077883_TTGGAGGT_L001_15986_1 
#>                                      "0121"                                       "022" 
#> lane1_3600STDY6077884_TCGAGCGT_L001_15986_1 lane1_3600STDY6077885_TGATACGT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077886_TGCATAGT_L001_15986_1 lane1_3600STDY6077887_TTGACTCT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077888_TGCGATCT_L001_15986_1 lane1_3600STDY6077889_TTCCTGCT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077890_TAGTGACT_L001_15986_1 lane1_3600STDY6077891_TACAGGAT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077892_TCCTCAAT_L001_15986_1 lane1_3600STDY6077893_TGTGGTTG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077894_TAGTCTTG_L001_15986_1 lane1_3600STDY6077895_TTCCATTG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077896_TCGAAGTG_L001_15986_1 lane1_3600STDY6077897_TAACGCTG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077898_TTGGTATG_L001_15986_1 lane1_3600STDY6077899_TGAACTGG_L001_15986_1 
#>                                      "0121"                                       "022" 
#> lane1_3600STDY6077900_TACTTCGG_L001_15986_1 lane1_3600STDY6077901_TCTCACGG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077902_TCAGGAGG_L001_15986_1 lane1_3600STDY6077903_TAAGTTCG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077904_TCCAGTCG_L001_15986_1 lane1_3600STDY6077905_TGTATGCG_L001_15986_1 
#>                                       "022"                                      "0121" 
#> lane1_3600STDY6077906_TCATTGAG_L001_15986_1 lane1_3600STDY6077907_TGGCTCAG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077908_TATGCCAG_L001_15986_1 lane1_3600STDY6077909_TCAGATTC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077910_TACTAGTC_L001_15986_1 lane1_3600STDY6077911_TTCAGCTC_L001_15986_1 
#>                                      "0121"                                       "022" 
#> lane1_3600STDY6077912_TGTCTATC_L001_15986_1 lane1_3600STDY6077913_TATGTGGC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077914_TTACTCGC_L001_15986_1 lane1_3600STDY6077915_TCGTTAGC_L001_15986_1 
#>                                       "022"                                      "0121" 
#> lane1_3600STDY6077916_TACCGAGC_L001_15986_1 lane1_3600STDY6077917_TGTTCTCC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077918_TTCGCACC_L001_15986_1 lane1_3600STDY6077919_TTGCGTAC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077920_TCTACGAC_L001_15986_1 lane1_3600STDY6077921_TGACAGAC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077922_TAGAACAC_L001_15986_1 lane1_3600STDY6077923_TCATCCTA_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077924_TGCTGATA_L001_15986_1 lane1_3600STDY6077925_TAGACGGA_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077926_TGTGAAGA_L001_15986_1 lane1_3600STDY6077927_TCTCTTCA_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077928_TTGTTCCA_L001_15986_1 lane1_3600STDY6077929_TGAAGCCA_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077930_TACCACCA_L001_15986_1 lane1_3600STDY6077931_TGCGTGAA_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077932_GGTGAGTT_L001_15986_1 lane1_3600STDY6077933_GATCTCTT_L001_15986_1 
#>                                      "0121"                                       "022" 
#> lane1_3600STDY6077934_GTGTCCTT_L001_15986_1 lane1_3600STDY6077935_GACGGATT_L001_15986_1 
#>                                       "022"                                      "0121" 
#> lane1_3600STDY6077936_GCAACATT_L001_15986_1 lane1_3600STDY6077937_GGTCGTGT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077938_GAATCTGT_L001_15986_1 lane1_3600STDY6077939_GTACATCT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077940_GAGGTGCT_L001_15986_1 lane1_3600STDY6077941_GCATGGCT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077942_GTTAGCCT_L001_15986_1 lane1_3600STDY6077943_GTCGCTAT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077944_GGAATGAT_L001_15986_1 lane1_3600STDY6077945_GAGCCAAT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077946_GCTCCTTG_L001_15986_1 lane1_3600STDY6077947_GTAAGGTG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077948_GAGGATGG_L001_15986_1 lane1_3600STDY6077949_GTTGTCGG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077950_GGATTAGG_L001_15986_1 lane1_3600STDY6077951_GATAGAGG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077952_GTGTGTCG_L001_15986_1 lane1_3600STDY6077953_GCAATCCG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077954_GACCTTAG_L001_15986_1 lane1_3600STDY6077955_GCCTGTTC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077956_GCACTGTC_L001_15986_1 lane1_3600STDY6077957_GCTAACTC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077958_GATTCATC_L001_15986_1 lane1_3600STDY6077959_GTCTTGGC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane3_3600STDY6077960_ATCACGTT_L003_15987_1 lane3_3600STDY6077961_CGATGTTT_L003_15987_1 
#>                                       "022"                                       "022" 
#> lane3_3600STDY6077962_TTAGGCAT_L003_15987_1 lane3_3600STDY6077963_TGACCACT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077964_ACAGTGGT_L003_15987_1 lane3_3600STDY6077965_GCCAATGT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077966_CAGATCTG_L003_15987_1 lane3_3600STDY6077967_ACTTGATG_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077968_GATCAGCG_L003_15987_1 lane3_3600STDY6077969_TAGCTTGT_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6077970_GGCTACAG_L003_15987_1 lane3_3600STDY6077971_CTTGTACT_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6077972_TGGTTGTT_L003_15987_1 lane3_3600STDY6077973_TCTCGGTT_L003_15987_1 
#>                                      "0123"                                      "0122" 
#> lane3_3600STDY6077974_TAAGCGTT_L003_15987_1 lane3_3600STDY6077975_TCCGTCTT_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6077976_TGTACCTT_L003_15987_1 lane3_3600STDY6077977_TTCTGTGT_L003_15987_1 
#>                                      "0123"                                      "0122" 
#> lane3_3600STDY6077978_TCTGCTGT_L003_15987_1 lane3_3600STDY6077979_TTGGAGGT_L003_15987_1 
#>                                       "022"                                      "0122" 
#> lane3_3600STDY6077980_TCGAGCGT_L003_15987_1 lane3_3600STDY6077981_TGATACGT_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6077982_TGCATAGT_L003_15987_1 lane3_3600STDY6077983_TTGACTCT_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6077984_TGCGATCT_L003_15987_1 lane3_3600STDY6077985_TTCCTGCT_L003_15987_1 
#>                                      "0123"                                      "0122" 
#> lane3_3600STDY6077986_TAGTGACT_L003_15987_1 lane3_3600STDY6077987_TACAGGAT_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6077988_TCCTCAAT_L003_15987_1 lane3_3600STDY6077989_TGTGGTTG_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077990_TAGTCTTG_L003_15987_1 lane3_3600STDY6077991_TTCCATTG_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6077992_TCGAAGTG_L003_15987_1 lane3_3600STDY6077993_TAACGCTG_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6077994_TTGGTATG_L003_15987_1 lane3_3600STDY6077995_TGAACTGG_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6077996_TACTTCGG_L003_15987_1 lane3_3600STDY6077997_TCTCACGG_L003_15987_1 
#>                                      "0122"                                       "022" 
#> lane3_3600STDY6077998_TCAGGAGG_L003_15987_1 lane3_3600STDY6077999_TAAGTTCG_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078000_TCCAGTCG_L003_15987_1 lane3_3600STDY6078001_TGTATGCG_L003_15987_1 
#>                                      "0122"                                       "022" 
#> lane3_3600STDY6078002_TCATTGAG_L003_15987_1 lane3_3600STDY6078003_TGGCTCAG_L003_15987_1 
#>                                        "03"                                      "0122" 
#> lane3_3600STDY6078004_TATGCCAG_L003_15987_1 lane3_3600STDY6078005_TCAGATTC_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6078006_TACTAGTC_L003_15987_1 lane3_3600STDY6078007_TTCAGCTC_L003_15987_1 
#>                                      "0123"                                      "0122" 
#> lane3_3600STDY6078008_TGTCTATC_L003_15987_1 lane3_3600STDY6078009_TATGTGGC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078010_TTACTCGC_L003_15987_1 lane3_3600STDY6078011_TCGTTAGC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078012_TACCGAGC_L003_15987_1 lane3_3600STDY6078013_TGTTCTCC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078014_TTCGCACC_L003_15987_1 lane3_3600STDY6078015_TTGCGTAC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078016_TCTACGAC_L003_15987_1 lane3_3600STDY6078017_TGACAGAC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078018_TAGAACAC_L003_15987_1 lane3_3600STDY6078019_TCATCCTA_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078020_TGCTGATA_L003_15987_1 lane3_3600STDY6078021_TAGACGGA_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078022_TGTGAAGA_L003_15987_1 lane3_3600STDY6078023_TCTCTTCA_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078024_TTGTTCCA_L003_15987_1 lane3_3600STDY6078025_TGAAGCCA_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078026_TACCACCA_L003_15987_1 lane3_3600STDY6078027_TGCGTGAA_L003_15987_1 
#>                                      "0123"                                       "022" 
#> lane3_3600STDY6078028_GGTGAGTT_L003_15987_1 lane3_3600STDY6078029_GATCTCTT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078030_GTGTCCTT_L003_15987_1 lane3_3600STDY6078031_GACGGATT_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078032_GCAACATT_L003_15987_1 lane3_3600STDY6078033_GGTCGTGT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078034_GAATCTGT_L003_15987_1 lane3_3600STDY6078035_GTACATCT_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6078036_GAGGTGCT_L003_15987_1 lane3_3600STDY6078037_GCATGGCT_L003_15987_1 
#>                                      "0123"                                      "0122" 
#> lane3_3600STDY6078038_GTTAGCCT_L003_15987_1 lane3_3600STDY6078039_GTCGCTAT_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078040_GGAATGAT_L003_15987_1 lane3_3600STDY6078041_GAGCCAAT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078042_GCTCCTTG_L003_15987_1 lane3_3600STDY6078043_GTAAGGTG_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078044_GAGGATGG_L003_15987_1 lane3_3600STDY6078045_GTTGTCGG_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078046_GGATTAGG_L003_15987_1 lane3_3600STDY6078047_GATAGAGG_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078048_GTGTGTCG_L003_15987_1 lane3_3600STDY6078049_GCAATCCG_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078050_GACCTTAG_L003_15987_1 lane3_3600STDY6078051_GCCTGTTC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078052_GCACTGTC_L003_15987_1 lane3_3600STDY6078053_GCTAACTC_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6078054_GATTCATC_L003_15987_1 lane3_3600STDY6078055_GTCTTGGC_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane1_3600STDY6167693_ATCACGTT_L001_17236_1 lane1_3600STDY6167694_CGATGTTT_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167695_TTAGGCAT_L001_17236_1 lane1_3600STDY6167696_TGACCACT_L001_17236_1 
#>                                        "03"                                       "011" 
#> lane1_3600STDY6167697_ACAGTGGT_L001_17236_1 lane1_3600STDY6167698_GCCAATGT_L001_17236_1 
#>                                       "022"                                       "011" 
#> lane1_3600STDY6167699_CAGATCTG_L001_17236_1 lane1_3600STDY6167700_ACTTGATG_L001_17236_1 
#>                                       "011"                                       "022" 
#> lane1_3600STDY6167701_GATCAGCG_L001_17236_1 lane1_3600STDY6167702_TAGCTTGT_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167703_GGCTACAG_L001_17236_1 lane1_3600STDY6167704_CTTGTACT_L001_17236_1 
#>                                       "014"                                        "03" 
#> lane1_3600STDY6167705_TGGTTGTT_L001_17236_1 lane1_3600STDY6167706_TCTCGGTT_L001_17236_1 
#>                                       "014"                                       "022" 
#> lane1_3600STDY6167707_TAAGCGTT_L001_17236_1 lane1_3600STDY6167708_TCCGTCTT_L001_17236_1 
#>                                       "022"                                       "013" 
#> lane1_3600STDY6167709_TGTACCTT_L001_17236_1 lane1_3600STDY6167710_TTCTGTGT_L001_17236_1 
#>                                       "011"                                       "022" 
#> lane1_3600STDY6167711_TCTGCTGT_L001_17236_1 lane1_3600STDY6167712_TTGGAGGT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167713_TCGAGCGT_L001_17236_1 lane1_3600STDY6167714_TGATACGT_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167715_TGCATAGT_L001_17236_1 lane1_3600STDY6167716_TTGACTCT_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167717_TGCGATCT_L001_17236_1 lane1_3600STDY6167718_TTCCTGCT_L001_17236_1 
#>                                       "013"                                       "022" 
#> lane1_3600STDY6167719_TAGTGACT_L001_17236_1 lane1_3600STDY6167720_TACAGGAT_L001_17236_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6167721_TCCTCAAT_L001_17236_1 lane1_3600STDY6167722_TGTGGTTG_L001_17236_1 
#>                                        "03"                                       "011" 
#> lane1_3600STDY6167723_TAGTCTTG_L001_17236_1 lane1_3600STDY6167724_TTCCATTG_L001_17236_1 
#>                                       "011"                                       "022" 
#> lane1_3600STDY6167725_TCGAAGTG_L001_17236_1 lane1_3600STDY6167726_TAACGCTG_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167727_TTGGTATG_L001_17236_1 lane1_3600STDY6167728_TGAACTGG_L001_17236_1 
#>                                       "013"                                      "0121" 
#> lane1_3600STDY6167729_TACTTCGG_L001_17236_1 lane1_3600STDY6167730_TCTCACGG_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167731_TCAGGAGG_L001_17236_1 lane1_3600STDY6167732_TAAGTTCG_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167733_TCCAGTCG_L001_17236_1 lane1_3600STDY6167734_TGTATGCG_L001_17236_1 
#>                                       "011"                                       "022" 
#> lane1_3600STDY6167735_TCATTGAG_L001_17236_1 lane1_3600STDY6167736_TGGCTCAG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167737_TATGCCAG_L001_17236_1 lane1_3600STDY6167738_TCAGATTC_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167739_TACTAGTC_L001_17236_1 lane1_3600STDY6167740_TTCAGCTC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167741_TGTCTATC_L001_17236_1 lane1_3600STDY6167742_TATGTGGC_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167743_TTACTCGC_L001_17236_1 lane1_3600STDY6167744_TCGTTAGC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167745_TACCGAGC_L001_17236_1 lane1_3600STDY6167746_TGTTCTCC_L001_17236_1 
#>                                        "03"                                       "011" 
#> lane1_3600STDY6167747_TTCGCACC_L001_17236_1 lane1_3600STDY6167748_TTGCGTAC_L001_17236_1 
#>                                        "03"                                       "011" 
#> lane1_3600STDY6167749_TCTACGAC_L001_17236_1 lane1_3600STDY6167750_TGACAGAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167751_TAGAACAC_L001_17236_1 lane1_3600STDY6167752_TCATCCTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167753_TGCTGATA_L001_17236_1 lane1_3600STDY6167754_TAGACGGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167755_TGTGAAGA_L001_17236_1 lane1_3600STDY6167756_TCTCTTCA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167757_TTGTTCCA_L001_17236_1 lane1_3600STDY6167758_TGAAGCCA_L001_17236_1 
#>                                       "011"                                       "022" 
#> lane1_3600STDY6167759_TACCACCA_L001_17236_1 lane1_3600STDY6167760_TGCGTGAA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167761_GGTGAGTT_L001_17236_1 lane1_3600STDY6167762_GATCTCTT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167763_GTGTCCTT_L001_17236_1 lane1_3600STDY6167764_GACGGATT_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167765_GCAACATT_L001_17236_1 lane1_3600STDY6167766_GGTCGTGT_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167767_GAATCTGT_L001_17236_1 lane1_3600STDY6167768_GTACATCT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167769_GAGGTGCT_L001_17236_1 lane1_3600STDY6167770_GCATGGCT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167771_GTTAGCCT_L001_17236_1 lane1_3600STDY6167772_GTCGCTAT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167773_GGAATGAT_L001_17236_1 lane1_3600STDY6167774_GAGCCAAT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167775_GCTCCTTG_L001_17236_1 lane1_3600STDY6167776_GTAAGGTG_L001_17236_1 
#>                                       "011"                                       "022" 
#> lane1_3600STDY6167777_GAGGATGG_L001_17236_1 lane1_3600STDY6167778_GTTGTCGG_L001_17236_1 
#>                                       "011"                                       "022" 
#> lane1_3600STDY6167779_GGATTAGG_L001_17236_1 lane1_3600STDY6167780_GATAGAGG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167781_GTGTGTCG_L001_17236_1 lane1_3600STDY6167782_GCAATCCG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167783_GACCTTAG_L001_17236_1 lane1_3600STDY6167784_GCCTGTTC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167785_GCACTGTC_L001_17236_1 lane1_3600STDY6167786_GCTAACTC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167787_GATTCATC_L001_17236_1 lane1_3600STDY6167788_GTCTTGGC_L001_17236_1 
#>                                       "011"                                       "022" 
#> lane1_3600STDY6167789_GTAGAAGC_L001_17236_1 lane1_3600STDY6167790_GATGGTCC_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167791_GTGCTACC_L001_17236_1 lane1_3600STDY6167792_GCGATTAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167793_GGTTGGAC_L001_17236_1 lane1_3600STDY6167794_GGCACAAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167795_GACACTTA_L001_17236_1 lane1_3600STDY6167796_GTGCAGTA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167797_GGAGTCTA_L001_17236_1 lane1_3600STDY6167798_GCTATGGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167799_GAGTGCGA_L001_17236_1 lane1_3600STDY6167800_GTAACCGA_L001_17236_1 
#>                                        "03"                                       "011" 
#> lane1_3600STDY6167801_GGCAAGCA_L001_17236_1 lane1_3600STDY6167802_GCCTTACA_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167803_GAACGACA_L001_17236_1 lane1_3600STDY6167804_GCAGGTAA_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167805_GCGTCGAA_L001_17236_1 lane1_3600STDY6167806_CGTTCGGT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167807_CACCAGGT_L001_17236_1 lane1_3600STDY6167808_CTGCGAGT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167809_CCGTATCT_L001_17236_1 lane1_3600STDY6167810_CGCTTCCT_L001_17236_1 
#>                                       "011"                                       "022" 
#> lane1_3600STDY6167811_CAAGACCT_L001_17236_1 lane1_3600STDY6167812_CACACACT_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167813_CCTAGTAT_L001_17236_1 lane1_3600STDY6167814_CCACCGAT_L001_17236_1 
#>                                       "022"                                       "011" 
#> lane1_3600STDY6167815_CTTCACAT_L001_17236_1 lane1_3600STDY6167816_CTATCATG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167817_CATGAATG_L001_17236_1 lane1_3600STDY6167818_CCACTTGG_L001_17236_1 
#>                                        "03"                                       "011" 
#> lane1_3600STDY6167819_CTGTACGG_L001_17236_1 lane1_3600STDY6167820_CTAGATAG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167821_CACTCGAG_L001_17236_1 lane1_3600STDY6167822_CCGACAAG_L001_17236_1 
#>                                        "03"                                       "013" 
#> lane1_3600STDY6167823_CTTGCTTC_L001_17236_1 lane1_3600STDY6167824_CATAGGTC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167825_CACATTGC_L001_17236_1 lane1_3600STDY6167826_CGCTAAGC_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167827_CAACCTCC_L001_17236_1 lane1_3600STDY6167828_CAGCTGAC_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167829_CTCAAGAC_L001_17236_1 lane1_3600STDY6167830_CGTGTCAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167831_CCATGCAC_L001_17236_1 lane1_3600STDY6167832_CGTTACTA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167833_CAAGTAGA_L001_17236_1 lane1_3600STDY6167834_CTCTCTCA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167835_CGACTGCA_L001_17236_1 lane1_3600STDY6167836_CCTGAGCA_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167837_CAGGCTAA_L001_17236_1 lane1_3600STDY6167838_CGGAGGAA_L001_17236_1 
#>                                       "014"                                       "011" 
#> lane1_3600STDY6167839_AGGAGATT_L001_17236_1 lane1_3600STDY6167840_AGGCAGCT_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167841_ACGTTCAT_L001_17236_1 lane1_3600STDY6167842_AACGTGTG_L001_17236_1 
#>                                        "03"                                       "013" 
#> lane1_3600STDY6167843_AGACCGTG_L001_17236_1 lane1_3600STDY6167844_ACCTCTGG_L001_17236_1 
#>                                        "03"                                       "022" 
#> lane1_3600STDY6167845_ATCCTAGG_L001_17236_1 lane1_3600STDY6167846_ATCAACCG_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167847_AGGTCACG_L001_17236_1 lane1_3600STDY6167848_ACTGTTAG_L001_17236_1 
#>                                       "022"                                       "013" 
#> lane1_3600STDY6167849_AAGAGTAG_L001_17236_1 lane1_3600STDY6167850_ATTCGGAG_L001_17236_1 
#>                                       "013"                                       "014" 
#> lane1_3600STDY6167851_ACGCAATC_L001_17236_1 lane1_3600STDY6167852_ACAAGTGC_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167853_ATGGATCC_L001_17236_1 lane1_3600STDY6167854_AGAGGACC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167855_ATCTCCAC_L001_17236_1 lane1_3600STDY6167856_ATTGGCTA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167857_AATCCTGA_L001_17236_1 lane1_3600STDY6167858_AGGATTCA_L001_17236_1 
#>                                       "022"                                       "022" 
#> lane1_3600STDY6167859_AACTGGCA_L001_17236_1 lane1_3600STDY6167860_ACAACGCA_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167861_CGGAAACA_L001_17236_1 lane1_3600STDY6167862_AATGAATT_L001_17236_1 
#>                                       "022"                                       "014" 
#> lane1_3600STDY6167863_TAGGACCC_L001_17236_1 lane1_3600STDY6167864_TCTCAGTG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167865_CATGGGAA_L001_17236_1 lane1_3600STDY6167866_CCTAAGAT_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167867_CTCAGATA_L001_17236_1 lane1_3600STDY6167868_CCCATAGG_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167869_GCTATGAC_L001_17236_1 lane1_3600STDY6167870_GCTGTGAA_L001_17236_1 
#>                                       "011"                                       "022" 
#> lane1_3600STDY6167871_ACCTTCAA_L001_17236_1 lane1_3600STDY6167872_ACAAAGCC_L001_17236_1 
#>                                       "022"                                       "022" 
#> lane1_3600STDY6167873_CAAAACCG_L001_17236_1 lane1_3600STDY6167874_GCTGGACA_L001_17236_1 
#>                                       "022"                                       "014" 
#> lane1_3600STDY6167875_AAGTCGTA_L001_17236_1 lane1_3600STDY6167876_CATCCGTA_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167877_TTGTGTCT_L001_17236_1 lane1_3600STDY6167878_TGCTCTAG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167879_ACCCAACA_L001_17236_1 lane1_3600STDY6167880_CGATCTGA_L001_17236_1 
#>                                       "022"                                       "011" 
#> lane1_3600STDY6167881_GTTCCACG_L001_17236_1 lane1_3600STDY6167882_ACTCTTTC_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167883_TATTGGAG_L001_17236_1 lane1_3600STDY6167884_TAAACATA_L001_17236_1 
#>                                       "022"                                       "022" 
#> lane1_3600STDY6167885_GTAAGATA_L001_17236_1 lane1_3600STDY6167886_TACCGCAA_L001_17236_1 
#>                                        "03"                                       "013" 
#> lane1_3600STDY6167887_TATCTCCT_L001_17236_1 lane1_3600STDY6167888_TGTCATCT_L001_17236_1 
#>                                        "03"                                       "011" 
#> lane1_3600STDY6167889_ATAGCTCT_L001_17236_1 lane1_3600STDY6167890_AGTCCAAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167891_TTTGGGCA_L001_17236_1 lane1_3600STDY6167892_TCTGACGC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167893_TGTCGACT_L001_17236_1 lane1_3600STDY6167894_GTCACGTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167895_TTGAGCGA_L001_17236_1 lane1_3600STDY6167896_GAGACATA_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167897_GTCAAGCT_L001_17236_1 lane1_3600STDY6167898_AGCAAGTT_L001_17236_1 
#>                                       "023"                                        "03" 
#> lane1_3600STDY6167899_GACGCTCA_L001_17236_1 lane1_3600STDY6167900_ACGGCAGC_L001_17236_1 
#>                                       "011"                                        "03" 
#> lane1_3600STDY6167901_AGAACTGA_L001_17236_1 lane1_3600STDY6167902_CGCCTTTG_L001_17236_1 
#>                                        "03"                                       "011" 
#> lane1_3600STDY6167903_TAAGGTCA_L001_17236_1 lane1_3600STDY6167904_ACGTTGGC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167905_CCAGCTTA_L001_17236_1 lane1_3600STDY6167906_GAATCCTA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167907_ACTTCGTA_L001_17236_1 lane1_3600STDY6167908_TAGTCGGT_L001_17236_1 
#>                                       "013"                                       "022" 
#> lane1_3600STDY6167909_CGCACGAG_L001_17236_1 lane1_3600STDY6167910_ACGTACTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167911_AGCGCCAA_L001_17236_1 lane1_3600STDY6167912_GCCTGCCC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167913_AGGACGAT_L001_17236_1 lane1_3600STDY6167914_CTTGACCG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167915_AGGTCTAA_L001_17236_1 lane1_3600STDY6167916_CGAGATCC_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167917_ATTAGCGG_L001_17236_1 lane1_3600STDY6167918_GCGCTGAT_L001_17236_1 
#>                                       "011"                                       "022" 
#> lane1_3600STDY6167919_TGCTGAAC_L001_17236_1 lane1_3600STDY6167920_GAGGGCAG_L001_17236_1 
#>                                       "014"                                       "022" 
#> lane1_3600STDY6167921_GTTTTCAC_L001_17236_1 lane1_3600STDY6167922_GAGATGCC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167923_TTGAGAAG_L001_17236_1 lane1_3600STDY6167924_GCATCCGG_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167925_GTCACCAG_L001_17236_1 lane1_3600STDY6167926_GAGGTCGC_L001_17236_1 
#>                                       "011"                                        "03" 
#> lane1_3600STDY6167927_AAGGGGTA_L001_17236_1 lane1_3600STDY6167928_TTTTACGT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167929_TTCCTACA_L001_17236_1 lane1_3600STDY6167930_AGTGTAGT_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167931_GTGGCCAA_L001_17236_1 lane1_3600STDY6167932_AAATACTC_L001_17236_1 
#>                                       "013"                                       "014" 
#> lane1_3600STDY6167933_CACCCGTC_L001_17236_1 lane1_3600STDY6167934_TCGTGGTT_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167935_ACTTGGGG_L001_17236_1 lane1_3600STDY6167936_GGCTGCTT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167937_CAGGGTCG_L001_17236_1 lane1_3600STDY6167938_CTCGTCGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167939_TCTACAGT_L001_17236_1 lane1_3600STDY6167940_CTTCTAGA_L001_17236_1 
#>                                       "011"                                        "03" 
#> lane1_3600STDY6167941_AACGGCTT_L001_17236_1 lane1_3600STDY6167942_ATAAGACT_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167943_GTTTTTCG_L001_17236_1 lane1_3600STDY6167944_ATTGGTAT_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167945_CGCCAGTA_L001_17236_1 lane1_3600STDY6167946_AAGCCGAA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167947_TGACCCAC_L001_17236_1 lane1_3600STDY6167948_ATTGCACA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167949_CTTTTGAT_L001_17236_1 lane1_3600STDY6167950_TAGCGAGA_L001_17236_1 
#>                                       "011"                                       "022" 
#> lane1_3600STDY6167951_TTCGCAGG_L001_17236_1 lane1_3600STDY6167952_TAGTTATT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167953_TCCTCCGA_L001_17236_1 lane1_3600STDY6167954_GCGGGTCT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167955_GATTCTAT_L001_17236_1 lane1_3600STDY6167956_ATGCAAAG_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167957_GTCTGAGG_L001_17236_1 lane1_3600STDY6167958_TCTGGCGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167959_AATTTGCG_L001_17236_1 lane1_3600STDY6167960_TGGGTTGG_L001_17236_1 
#>                                       "011"                                        "03" 
#> lane1_3600STDY6167961_AGTTGAAA_L001_17236_1 lane1_3600STDY6167962_GACCGGAA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167963_GATCGAAC_L001_17236_1 lane1_3600STDY6167964_GTATAGGG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167965_GGTAAGAG_L001_17236_1 lane1_3600STDY6167966_AGTCCGAT_L001_17236_1 
#>                                       "022"                                       "011" 
#> lane1_3600STDY6167967_ATACAGGC_L001_17236_1 lane1_3600STDY6167968_TGAGACTC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167969_ACTCAGGA_L001_17236_1 lane1_3600STDY6167970_GTGTCTGA_L001_17236_1 
#>                                       "011"                                        "03" 
#> lane1_3600STDY6167971_CTTGAATC_L001_17236_1 lane1_3600STDY6167972_CCGCATGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167973_AAGTAACA_L001_17236_1 lane1_3600STDY6167974_GTGGTACT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167975_AGCTGTGC_L001_17236_1 lane1_3600STDY6167976_TTACCTTC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167977_TCCGGGTA_L001_17236_1 lane1_3600STDY6167978_CTACGTAA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167979_TCGGACCG_L001_17236_1 lane1_3600STDY6167980_ATGCGTCG_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167981_TTCTTAGC_L001_17236_1 lane1_3600STDY6167982_TGAGTAAG_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167983_AAGTGATA_L001_17236_1 lane1_3600STDY6167984_TCGATGCG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167985_TATTCTGG_L001_17236_1 lane1_3600STDY6167986_AGCCGTGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167987_AAGCCTTC_L001_17236_1 lane1_3600STDY6167988_AGGTATCC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167989_AGGATCTC_L001_17236_1 lane1_3600STDY6167990_CTGTTTGA_L001_17236_1 
#>                                       "022"                                       "011" 
#> lane1_3600STDY6167991_GGAATTTC_L001_17236_1 lane1_3600STDY6167992_TTGGAGCA_L001_17236_1 
#>                                       "013"                                        "03" 
#> lane1_3600STDY6167993_AAGGTCTG_L001_17236_1 lane1_3600STDY6167994_AATTAGGC_L001_17236_1 
#>                                        "03"                                       "011" 
#> lane1_3600STDY6167995_AATCGGGT_L001_17236_1 lane1_3600STDY6167996_AGGTAGAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167997_CTTATTCC_L001_17236_1 lane1_3600STDY6167998_CAGGCTCT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167999_AAAGCACG_L001_17236_1 lane1_3600STDY6168000_GTATACAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168001_GGACATAT_L001_17236_1 lane1_3600STDY6168002_CGGTTGGG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168003_GTCCGTGA_L001_17236_1 lane1_3600STDY6168004_GCCGAACC_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6168005_ACTTTACT_L001_17236_1 lane1_3600STDY6168006_GGGTCCAT_L001_17236_1 
#>                                        "03"                                       "013" 
#> lane1_3600STDY6168007_ATAACTAG_L001_17236_1 lane1_3600STDY6168008_AATAGAGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168009_TCACCATT_L001_17236_1 lane1_3600STDY6168010_CGCCTGAT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168011_GCGTGAAC_L001_17236_1 lane1_3600STDY6168012_TAAGGGTG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168013_GGTGTCGA_L001_17236_1 lane1_3600STDY6168014_CCGTTAGG_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6168015_TGGCAAAA_L001_17236_1 lane1_3600STDY6168016_CCTACCCG_L001_17236_1 
#>                                       "011"                                       "022" 
#> lane1_3600STDY6168017_AACAGCGC_L001_17236_1 lane1_3600STDY6168018_TATACATC_L001_17236_1 
#>                                       "013"                                       "022" 
#> lane1_3600STDY6168019_AAGCGACT_L001_17236_1 lane1_3600STDY6168020_GAAGCGCA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168021_ACCTCTAC_L001_17236_1 lane1_3600STDY6168022_GATTGCGT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168023_GCTGGTTG_L001_17236_1 lane1_3600STDY6168024_ATCGTCCT_L001_17236_1 
#>                                       "022"                                       "011" 
#> lane1_3600STDY6168025_GGACACGG_L001_17236_1 lane1_3600STDY6168026_CGCACCTA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168027_CTTCGGCT_L001_17236_1 lane1_3600STDY6168028_CGAATCGA_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6168029_TAACAACT_L001_17236_1 lane1_3600STDY6168030_AGCTCTTT_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168031_TAATCCCT_L001_17236_1 lane1_3600STDY6168032_AGGACACT_L001_17236_1 
#>                                       "011"                                        "03" 
#> lane1_3600STDY6168033_TTACACTA_L001_17236_1 lane1_3600STDY6168034_AAACATCA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168035_CCATAGCT_L001_17236_1 lane1_3600STDY6168036_GTTATGGC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168037_ATCCCCTA_L001_17236_1 lane1_3600STDY6168038_CATACTAC_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6168039_CAATTGTT_L001_17236_1 lane1_3600STDY6168040_AAACCCGT_L001_17236_1 
#>                                       "014"                                       "022" 
#> lane1_3600STDY6168041_CAGATTTC_L001_17236_1 lane1_3600STDY6168042_GCGTAGGT_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6168043_GGCATTCG_L001_17236_1 lane1_3600STDY6168044_TGGGGCTT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168045_CTGACTAC_L001_17236_1 lane1_3600STDY6168046_AACTTTTA_L001_17236_1 
#>                                       "011"                                        "03" 
#> lane1_3600STDY6168047_AGGGATTC_L001_17236_1 lane1_3600STDY6168048_CCGAGTAG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168049_GGGGACTA_L001_17236_1 lane1_3600STDY6168050_GGAGTTGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168051_AGCTCATC_L001_17236_1 lane1_3600STDY6168052_TAATCAAC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168053_ACTGGTCG_L001_17236_1 lane1_3600STDY6168054_GACGATTG_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168055_AGCGATGA_L001_17236_1 lane1_3600STDY6168056_GAAGAGAT_L001_17236_1 
#>                                       "011"                                        "03" 
#> lane1_3600STDY6168057_CGTATGCA_L001_17236_1 lane1_3600STDY6168058_CACGTGCG_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6168059_GCTTAAAC_L001_17236_1 lane1_3600STDY6168060_GTTCCGCA_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6168061_GTATCGTC_L001_17236_1 lane1_3600STDY6168062_GTCCTCAC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168063_GTACGGAC_L001_17236_1 lane1_3600STDY6168064_CATTTTGC_L001_17236_1 
#>                                       "022"                                       "022" 
#> lane1_3600STDY6168065_TCCTCTCT_L001_17236_1 lane1_3600STDY6168066_AGCAACGA_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6168067_ACAGAAGA_L001_17236_1 lane1_3600STDY6168068_CGACCCTT_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6168069_CTGCCTAG_L001_17236_1 lane1_3600STDY6168070_GAGCGCAT_L001_17236_1 
#>                                       "022"                                       "013" 
#> lane1_3600STDY6168071_AACTTATC_L001_17236_1 lane1_3600STDY6168072_CCGATGTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168073_TTACTACC_L001_17236_1 lane1_3600STDY6168074_CAAGGAGC_L001_17236_1 
#>                                       "013"                                       "014" 
#> lane1_3600STDY6168075_TGGTTGAC_L001_17236_1 lane1_3600STDY6168076_ACCTGCTG_L001_17236_1 
#>                                       "022"                                       "022" 
#> lane4_3600STDY6184181_ATCACGTT_L004_17480_1 lane4_3600STDY6184182_CGATGTTT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184183_TTAGGCAT_L004_17480_1 lane4_3600STDY6184184_TGACCACT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184185_ACAGTGGT_L004_17480_1 lane4_3600STDY6184186_GCCAATGT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184187_CAGATCTG_L004_17480_1 lane4_3600STDY6184188_ACTTGATG_L004_17480_1 
#>                                        "03"                                       "021" 
#> lane4_3600STDY6184189_GATCAGCG_L004_17480_1 lane4_3600STDY6184190_TAGCTTGT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184191_GGCTACAG_L004_17480_1 lane4_3600STDY6184192_CTTGTACT_L004_17480_1 
#>                                        "03"                                       "021" 
#> lane4_3600STDY6184193_TGGTTGTT_L004_17480_1 lane4_3600STDY6184194_TCTCGGTT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184195_TAAGCGTT_L004_17480_1 lane4_3600STDY6184196_TCCGTCTT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184197_TGTACCTT_L004_17480_1 lane4_3600STDY6184198_TTCTGTGT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184199_TCTGCTGT_L004_17480_1 lane4_3600STDY6184200_TTGGAGGT_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184201_TCGAGCGT_L004_17480_1 lane4_3600STDY6184202_TGATACGT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184203_TGCATAGT_L004_17480_1 lane4_3600STDY6184204_TTGACTCT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184205_TGCGATCT_L004_17480_1 lane4_3600STDY6184206_TTCCTGCT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184207_TAGTGACT_L004_17480_1 lane4_3600STDY6184208_TACAGGAT_L004_17480_1 
#>                                        "03"                                       "021" 
#> lane4_3600STDY6184209_TCCTCAAT_L004_17480_1 lane4_3600STDY6184210_TGTGGTTG_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184211_TAGTCTTG_L004_17480_1 lane4_3600STDY6184212_TTCCATTG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184213_TCGAAGTG_L004_17480_1 lane4_3600STDY6184214_TAACGCTG_L004_17480_1 
#>                                       "022"                                        "03" 
#> lane4_3600STDY6184215_TTGGTATG_L004_17480_1 lane4_3600STDY6184216_TGAACTGG_L004_17480_1 
#>                                       "021"                                       "022" 
#> lane4_3600STDY6184217_TACTTCGG_L004_17480_1 lane4_3600STDY6184218_TCTCACGG_L004_17480_1 
#>                                       "021"                                        "03" 
#> lane4_3600STDY6184219_TCAGGAGG_L004_17480_1 lane4_3600STDY6184220_TAAGTTCG_L004_17480_1 
#>                                       "021"                                        "03" 
#> lane4_3600STDY6184221_TCCAGTCG_L004_17480_1 lane4_3600STDY6184222_TGTATGCG_L004_17480_1 
#>                                        "03"                                       "021" 
#> lane4_3600STDY6184223_TCATTGAG_L004_17480_1 lane4_3600STDY6184224_TGGCTCAG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184225_TATGCCAG_L004_17480_1 lane4_3600STDY6184226_TCAGATTC_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184227_TACTAGTC_L004_17480_1 lane4_3600STDY6184228_TTCAGCTC_L004_17480_1 
#>                                       "021"                                        "03" 
#> lane4_3600STDY6184229_TGTCTATC_L004_17480_1 lane4_3600STDY6184230_TATGTGGC_L004_17480_1 
#>                                        "03"                                       "021" 
#> lane4_3600STDY6184231_TTACTCGC_L004_17480_1 lane4_3600STDY6184232_TCGTTAGC_L004_17480_1 
#>                                       "021"                                        "03" 
#> lane4_3600STDY6184233_TACCGAGC_L004_17480_1 lane4_3600STDY6184234_TGTTCTCC_L004_17480_1 
#>                                        "03"                                       "021" 
#> lane4_3600STDY6184235_TTCGCACC_L004_17480_1 lane4_3600STDY6184236_TTGCGTAC_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184237_TCTACGAC_L004_17480_1 lane4_3600STDY6184238_TGACAGAC_L004_17480_1 
#>                                        "03"                                       "021" 
#> lane4_3600STDY6184239_TAGAACAC_L004_17480_1 lane4_3600STDY6184240_TCATCCTA_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184241_TGCTGATA_L004_17480_1 lane4_3600STDY6184242_TAGACGGA_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184243_TGTGAAGA_L004_17480_1 lane4_3600STDY6184244_TCTCTTCA_L004_17480_1 
#>                                        "03"                                       "021" 
#> lane4_3600STDY6184245_TTGTTCCA_L004_17480_1 lane4_3600STDY6184246_TGAAGCCA_L004_17480_1 
#>                                        "03"                                       "021" 
#> lane4_3600STDY6184247_TACCACCA_L004_17480_1 lane4_3600STDY6184248_TGCGTGAA_L004_17480_1 
#>                                       "022"                                       "021" 
#> lane4_3600STDY6184249_GGTGAGTT_L004_17480_1 lane4_3600STDY6184250_GATCTCTT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184251_GTGTCCTT_L004_17480_1 lane4_3600STDY6184252_GACGGATT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184253_GCAACATT_L004_17480_1 lane4_3600STDY6184254_GGTCGTGT_L004_17480_1 
#>                                        "03"                                       "021" 
#> lane4_3600STDY6184255_GAATCTGT_L004_17480_1 lane4_3600STDY6184256_GTACATCT_L004_17480_1 
#>                                        "03"                                       "021" 
#> lane4_3600STDY6184257_GAGGTGCT_L004_17480_1 lane4_3600STDY6184258_GCATGGCT_L004_17480_1 
#>                                       "023"                                       "021" 
#> lane4_3600STDY6184259_GTTAGCCT_L004_17480_1 lane4_3600STDY6184260_GTCGCTAT_L004_17480_1 
#>                                       "021"                                       "022" 
#> lane4_3600STDY6184261_GGAATGAT_L004_17480_1 lane4_3600STDY6184262_GAGCCAAT_L004_17480_1 
#>                                       "023"                                       "021" 
#> lane4_3600STDY6184263_GCTCCTTG_L004_17480_1 lane4_3600STDY6184264_GTAAGGTG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184265_GAGGATGG_L004_17480_1 lane4_3600STDY6184266_GTTGTCGG_L004_17480_1 
#>                                       "021"                                        "03" 
#> lane4_3600STDY6184267_GGATTAGG_L004_17480_1 lane4_3600STDY6184268_GATAGAGG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184269_GTGTGTCG_L004_17480_1 lane4_3600STDY6184270_GCAATCCG_L004_17480_1 
#>                                        "03"                                       "023" 
#> lane4_3600STDY6184271_GACCTTAG_L004_17480_1 lane4_3600STDY6184272_GCCTGTTC_L004_17480_1 
#>                                       "022"                                       "021" 
#> lane4_3600STDY6184273_GCACTGTC_L004_17480_1 lane4_3600STDY6184274_GCTAACTC_L004_17480_1 
#>                                       "021"                                        "03" 
#> lane4_3600STDY6184275_GATTCATC_L004_17480_1 lane4_3600STDY6184276_GTCTTGGC_L004_17480_1 
#>                                       "021"                                        "03" 
#> lane4_3600STDY6184277_GTAGAAGC_L004_17480_1 lane4_3600STDY6184278_GATGGTCC_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184279_GTGCTACC_L004_17480_1 lane4_3600STDY6184280_GCGATTAC_L004_17480_1 
#>                                        "03"                                       "021" 
#> lane4_3600STDY6184281_GGTTGGAC_L004_17480_1 lane4_3600STDY6184282_GGCACAAC_L004_17480_1 
#>                                        "03"                                       "022" 
#> lane4_3600STDY6184283_GACACTTA_L004_17480_1 lane4_3600STDY6184284_GTGCAGTA_L004_17480_1 
#>                                       "021"                                        "03" 
#> lane4_3600STDY6184285_GGAGTCTA_L004_17480_1 lane4_3600STDY6184286_GCTATGGA_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184287_GAGTGCGA_L004_17480_1 lane4_3600STDY6184288_GTAACCGA_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184289_GGCAAGCA_L004_17480_1 lane4_3600STDY6184290_GCCTTACA_L004_17480_1 
#>                                        "03"                                       "021" 
#> lane4_3600STDY6184291_GAACGACA_L004_17480_1 lane4_3600STDY6184292_GCAGGTAA_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184293_GCGTCGAA_L004_17480_1 lane4_3600STDY6184294_CGTTCGGT_L004_17480_1 
#>                                        "03"                                       "022" 
#> lane4_3600STDY6184295_CACCAGGT_L004_17480_1 lane4_3600STDY6184296_CTGCGAGT_L004_17480_1 
#>                                       "021"                                        "03" 
#> lane4_3600STDY6184297_CCGTATCT_L004_17480_1 lane4_3600STDY6184298_CGCTTCCT_L004_17480_1 
#>                                       "021"                                        "03" 
#> lane4_3600STDY6184299_CAAGACCT_L004_17480_1 lane4_3600STDY6184300_CACACACT_L004_17480_1 
#>                                       "021"                                        "03" 
#> lane4_3600STDY6184301_CCTAGTAT_L004_17480_1 lane4_3600STDY6184302_CCACCGAT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184303_CTTCACAT_L004_17480_1 lane4_3600STDY6184304_CTATCATG_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184305_CATGAATG_L004_17480_1 lane4_3600STDY6184306_CCACTTGG_L004_17480_1 
#>                                        "03"                                       "021" 
#> lane4_3600STDY6184307_CTGTACGG_L004_17480_1 lane4_3600STDY6184308_CTAGATAG_L004_17480_1 
#>                                       "021"                                        "03" 
#> lane4_3600STDY6184309_CACTCGAG_L004_17480_1 lane4_3600STDY6184310_CCGACAAG_L004_17480_1 
#>                                       "022"                                        "03" 
#> lane4_3600STDY6184311_CTTGCTTC_L004_17480_1 lane4_3600STDY6184312_CATAGGTC_L004_17480_1 
#>                                       "021"                                       "022" 
#> lane4_3600STDY6184313_CACATTGC_L004_17480_1 lane4_3600STDY6184314_CGCTAAGC_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184315_CAACCTCC_L004_17480_1 lane4_3600STDY6184316_CAGCTGAC_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184317_CTCAAGAC_L004_17480_1 lane4_3600STDY6184318_CGTGTCAC_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184319_CCATGCAC_L004_17480_1 lane4_3600STDY6184320_CGTTACTA_L004_17480_1 
#>                                       "022"                                        "03" 
#> lane4_3600STDY6184321_CAAGTAGA_L004_17480_1 lane4_3600STDY6184322_CTCTCTCA_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184323_CGACTGCA_L004_17480_1 lane4_3600STDY6184324_CCTGAGCA_L004_17480_1 
#>                                       "021"                                       "022" 
#> lane4_3600STDY6184325_CAGGCTAA_L004_17480_1 lane4_3600STDY6184326_CGGAGGAA_L004_17480_1 
#>                                        "03"                                       "021" 
#> lane4_3600STDY6184327_AGGAGATT_L004_17480_1 lane4_3600STDY6184328_AGGCAGCT_L004_17480_1 
#>                                        "03"                                       "021" 
#> lane4_3600STDY6184329_ACGTTCAT_L004_17480_1 lane4_3600STDY6184330_AACGTGTG_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184331_AGACCGTG_L004_17480_1 lane4_3600STDY6184332_ACCTCTGG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184333_ATCCTAGG_L004_17480_1 lane4_3600STDY6184334_ATCAACCG_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184335_AGGTCACG_L004_17480_1 lane4_3600STDY6184336_ACTGTTAG_L004_17480_1 
#>                                        "03"                                       "021" 
#> lane4_3600STDY6184337_AAGAGTAG_L004_17480_1 lane4_3600STDY6184338_ATTCGGAG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184339_ACGCAATC_L004_17480_1 lane4_3600STDY6184340_ACAAGTGC_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184341_ATGGATCC_L004_17480_1 lane4_3600STDY6184342_AGAGGACC_L004_17480_1 
#>                                       "021"                                       "022" 
#> lane4_3600STDY6184343_ATCTCCAC_L004_17480_1 lane4_3600STDY6184344_ATTGGCTA_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184345_AATCCTGA_L004_17480_1 lane4_3600STDY6184346_AGGATTCA_L004_17480_1 
#>                                        "03"                                       "022" 
#> lane4_3600STDY6184347_AACTGGCA_L004_17480_1 lane4_3600STDY6184348_ACAACGCA_L004_17480_1 
#>                                       "022"                                       "022" 
#> lane4_3600STDY6184349_CGGAAACA_L004_17480_1 lane4_3600STDY6184350_AATGAATT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184351_TAGGACCC_L004_17480_1 lane4_3600STDY6184352_TCTCAGTG_L004_17480_1 
#>                                        "03"                                       "022" 
#> lane4_3600STDY6184353_CATGGGAA_L004_17480_1 lane4_3600STDY6184354_CCTAAGAT_L004_17480_1 
#>                                        "03"                                       "021" 
#> lane4_3600STDY6184355_CTCAGATA_L004_17480_1 lane4_3600STDY6184356_CCCATAGG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184357_GCTATGAC_L004_17480_1 lane4_3600STDY6184358_GCTGTGAA_L004_17480_1 
#>                                       "022"                                       "022" 
#> lane4_3600STDY6184359_ACCTTCAA_L004_17480_1 lane4_3600STDY6184360_ACAAAGCC_L004_17480_1 
#>                                       "022"                                       "022" 
#> lane4_3600STDY6184361_CAAAACCG_L004_17480_1 lane4_3600STDY6184362_GCTGGACA_L004_17480_1 
#>                                       "021"                                        "03" 
#> lane4_3600STDY6184363_AAGTCGTA_L004_17480_1 lane4_3600STDY6184364_CATCCGTA_L004_17480_1 
#>                                       "021"                                       "023" 
#> lane4_3600STDY6184365_TTGTGTCT_L004_17480_1 lane4_3600STDY6184366_TGCTCTAG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184367_ACCCAACA_L004_17480_1 lane4_3600STDY6184368_CGATCTGA_L004_17480_1 
#>                                       "022"                                       "021" 
#> lane4_3600STDY6184369_GTTCCACG_L004_17480_1 lane4_3600STDY6184370_ACTCTTTC_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184371_TATTGGAG_L004_17480_1 lane4_3600STDY6184372_TAAACATA_L004_17480_1 
#>                                       "022"                                       "022" 
#> lane4_3600STDY6184373_GTAAGATA_L004_17480_1 lane4_3600STDY6184374_TACCGCAA_L004_17480_1 
#>                                       "022"                                        "03" 
#> lane4_3600STDY6184375_TATCTCCT_L004_17480_1 lane4_3600STDY6184376_TGTCATCT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184377_ATAGCTCT_L004_17480_1 lane4_3600STDY6184378_AGTCCAAC_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184379_TTTGGGCA_L004_17480_1 lane4_3600STDY6184380_TCTGACGC_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184381_TGTCGACT_L004_17480_1 lane4_3600STDY6184382_GTCACGTA_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184383_TTGAGCGA_L004_17480_1 lane4_3600STDY6184384_GAGACATA_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184385_GTCAAGCT_L004_17480_1 lane4_3600STDY6184386_AGCAAGTT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184387_GACGCTCA_L004_17480_1 lane4_3600STDY6184388_ACGGCAGC_L004_17480_1 
#>                                        "03"                                       "021" 
#> lane4_3600STDY6184389_AGAACTGA_L004_17480_1 lane4_3600STDY6184390_CGCCTTTG_L004_17480_1 
#>                                       "021"                                       "022" 
#> lane4_3600STDY6184391_TAAGGTCA_L004_17480_1 lane4_3600STDY6184392_ACGTTGGC_L004_17480_1 
#>                                       "022"                                       "021" 
#> lane4_3600STDY6184393_CCAGCTTA_L004_17480_1 lane4_3600STDY6184394_GAATCCTA_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184395_ACTTCGTA_L004_17480_1 lane4_3600STDY6184396_TAGTCGGT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184397_CGCACGAG_L004_17480_1 lane4_3600STDY6184398_ACGTACTA_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184399_AGCGCCAA_L004_17480_1 lane4_3600STDY6184400_GCCTGCCC_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184401_AGGACGAT_L004_17480_1 lane4_3600STDY6184402_CTTGACCG_L004_17480_1 
#>                                       "021"                                        "03" 
#> lane4_3600STDY6184403_AGGTCTAA_L004_17480_1 lane4_3600STDY6184404_CGAGATCC_L004_17480_1 
#>                                       "021"                                        "03" 
#> lane4_3600STDY6184405_ATTAGCGG_L004_17480_1 lane4_3600STDY6184406_GCGCTGAT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184407_TGCTGAAC_L004_17480_1 lane4_3600STDY6184408_GAGGGCAG_L004_17480_1 
#>                                        "03"                                       "021" 
#> lane4_3600STDY6184409_GTTTTCAC_L004_17480_1 lane4_3600STDY6184410_GAGATGCC_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184411_TTGAGAAG_L004_17480_1 lane4_3600STDY6184412_GCATCCGG_L004_17480_1 
#>                                        "03"                                       "023" 
#> lane4_3600STDY6184413_GTCACCAG_L004_17480_1 lane4_3600STDY6184414_GAGGTCGC_L004_17480_1 
#>                                       "021"                                       "022" 
#> lane4_3600STDY6184415_AAGGGGTA_L004_17480_1 lane4_3600STDY6184416_TTTTACGT_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184417_TTCCTACA_L004_17480_1 lane4_3600STDY6184418_AGTGTAGT_L004_17480_1 
#>                                        "03"                                       "021" 
#> lane4_3600STDY6184419_GTGGCCAA_L004_17480_1 lane4_3600STDY6184420_AAATACTC_L004_17480_1 
#>                                       "021"                                        "03" 
#> lane4_3600STDY6184421_CACCCGTC_L004_17480_1 lane4_3600STDY6184422_TCGTGGTT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184423_ACTTGGGG_L004_17480_1 lane4_3600STDY6184424_GGCTGCTT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184425_CAGGGTCG_L004_17480_1 lane4_3600STDY6184426_CTCGTCGA_L004_17480_1 
#>                                        "03"                                       "021" 
#> lane4_3600STDY6184427_TCTACAGT_L004_17480_1 lane4_3600STDY6184428_CTTCTAGA_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184429_AACGGCTT_L004_17480_1 lane4_3600STDY6184430_ATAAGACT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184431_GTTTTTCG_L004_17480_1 lane4_3600STDY6184432_ATTGGTAT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184433_CGCCAGTA_L004_17480_1 lane4_3600STDY6184434_AAGCCGAA_L004_17480_1 
#>                                       "022"                                        "03" 
#> lane4_3600STDY6184435_TGACCCAC_L004_17480_1 lane4_3600STDY6184436_ATTGCACA_L004_17480_1 
#>                                       "021"                                        "03" 
#> lane4_3600STDY6184437_CTTTTGAT_L004_17480_1 lane4_3600STDY6184438_TAGCGAGA_L004_17480_1 
#>                                       "021"                                       "022" 
#> lane4_3600STDY6184439_TTCGCAGG_L004_17480_1 lane4_3600STDY6184440_TAGTTATT_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184441_TCCTCCGA_L004_17480_1 lane4_3600STDY6184442_GCGGGTCT_L004_17480_1 
#>                                        "03"                                       "021" 
#> lane4_3600STDY6184443_GATTCTAT_L004_17480_1 lane4_3600STDY6184444_ATGCAAAG_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184445_GTCTGAGG_L004_17480_1 lane4_3600STDY6184446_TCTGGCGA_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184447_AATTTGCG_L004_17480_1 lane4_3600STDY6184448_TGGGTTGG_L004_17480_1 
#>                                       "022"                                       "023" 
#> lane4_3600STDY6184449_AGTTGAAA_L004_17480_1 lane4_3600STDY6184450_GACCGGAA_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184451_GATCGAAC_L004_17480_1 lane4_3600STDY6184452_GTATAGGG_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184453_GGTAAGAG_L004_17480_1 lane4_3600STDY6184454_AGTCCGAT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184455_ATACAGGC_L004_17480_1 lane4_3600STDY6184456_TGAGACTC_L004_17480_1 
#>                                       "021"                                       "022" 
#> lane4_3600STDY6184457_ACTCAGGA_L004_17480_1 lane4_3600STDY6184458_GTGTCTGA_L004_17480_1 
#>                                       "021"                                        "03" 
#> lane4_3600STDY6184459_CTTGAATC_L004_17480_1 lane4_3600STDY6184460_CCGCATGA_L004_17480_1 
#>                                       "021"                                       "022" 
#> lane4_3600STDY6184461_AAGTAACA_L004_17480_1 lane4_3600STDY6184462_GTGGTACT_L004_17480_1 
#>                                       "022"                                       "022" 
#> lane4_3600STDY6184463_AGCTGTGC_L004_17480_1 lane4_3600STDY6184464_TTACCTTC_L004_17480_1 
#>                                       "022"                                       "022" 
#> lane4_3600STDY6184465_TCCGGGTA_L004_17480_1 lane4_3600STDY6184466_CTACGTAA_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184467_TCGGACCG_L004_17480_1 lane4_3600STDY6184468_ATGCGTCG_L004_17480_1 
#>                                       "021"                                        "03" 
#> lane4_3600STDY6184469_TTCTTAGC_L004_17480_1 lane4_3600STDY6184470_TGAGTAAG_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184471_AAGTGATA_L004_17480_1 lane4_3600STDY6184472_TCGATGCG_L004_17480_1 
#>                                       "021"                                        "03" 
#> lane4_3600STDY6184473_TATTCTGG_L004_17480_1 lane4_3600STDY6184474_AGCCGTGA_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184475_AAGCCTTC_L004_17480_1 lane4_3600STDY6184476_AGGTATCC_L004_17480_1 
#>                                       "021"                                        "03" 
#> lane4_3600STDY6184477_AGGATCTC_L004_17480_1 lane4_3600STDY6184478_CTGTTTGA_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184479_GGAATTTC_L004_17480_1 lane4_3600STDY6184480_TTGGAGCA_L004_17480_1 
#>                                        "03"                                       "021" 
#> lane4_3600STDY6184481_AAGGTCTG_L004_17480_1 lane4_3600STDY6184482_AATTAGGC_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184483_AATCGGGT_L004_17480_1 lane4_3600STDY6184484_AGGTAGAC_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184485_CTTATTCC_L004_17480_1 lane4_3600STDY6184486_CAGGCTCT_L004_17480_1 
#>                                        "03"                                       "022" 
#> lane4_3600STDY6184487_AAAGCACG_L004_17480_1 lane4_3600STDY6184488_GTATACAC_L004_17480_1 
#>                                       "022"                                       "021" 
#> lane4_3600STDY6184489_GGACATAT_L004_17480_1 lane4_3600STDY6184490_CGGTTGGG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184491_GTCCGTGA_L004_17480_1 lane4_3600STDY6184492_GCCGAACC_L004_17480_1 
#>                                       "021"                                        "03" 
#> lane4_3600STDY6184493_ACTTTACT_L004_17480_1 lane4_3600STDY6184494_GGGTCCAT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184495_ATAACTAG_L004_17480_1 lane4_3600STDY6184496_AATAGAGA_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184497_TCACCATT_L004_17480_1 lane4_3600STDY6184498_CGCCTGAT_L004_17480_1 
#>                                        "03"                                       "022" 
#> lane4_3600STDY6184499_GCGTGAAC_L004_17480_1 lane4_3600STDY6184500_TAAGGGTG_L004_17480_1 
#>                                        "03"                                       "021" 
#> lane4_3600STDY6184501_GGTGTCGA_L004_17480_1 lane4_3600STDY6184502_CCGTTAGG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184503_TGGCAAAA_L004_17480_1 lane4_3600STDY6184504_CCTACCCG_L004_17480_1 
#>                                       "021"                                       "022" 
#> lane4_3600STDY6184505_AACAGCGC_L004_17480_1 lane4_3600STDY6184506_TATACATC_L004_17480_1 
#>                                       "021"                                        "03" 
#> lane4_3600STDY6184507_AAGCGACT_L004_17480_1 lane4_3600STDY6184508_GAAGCGCA_L004_17480_1 
#>                                       "021"                                       "022" 
#> lane4_3600STDY6184509_ACCTCTAC_L004_17480_1 lane4_3600STDY6184510_GATTGCGT_L004_17480_1 
#>                                       "022"                                       "023" 
#> lane4_3600STDY6184511_GCTGGTTG_L004_17480_1 lane4_3600STDY6184512_ATCGTCCT_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184513_GGACACGG_L004_17480_1 lane4_3600STDY6184514_CGCACCTA_L004_17480_1 
#>                                        "03"                                       "021" 
#> lane4_3600STDY6184515_CTTCGGCT_L004_17480_1 lane4_3600STDY6184516_CGAATCGA_L004_17480_1 
#>                                       "021"                                        "03" 
#> lane4_3600STDY6184517_TAACAACT_L004_17480_1 lane4_3600STDY6184518_AGCTCTTT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184519_TAATCCCT_L004_17480_1 lane4_3600STDY6184520_AGGACACT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184521_TTACACTA_L004_17480_1 lane4_3600STDY6184522_AAACATCA_L004_17480_1 
#>                                        "03"                                       "021" 
#> lane4_3600STDY6184523_CCATAGCT_L004_17480_1 lane4_3600STDY6184524_GTTATGGC_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184525_ATCCCCTA_L004_17480_1 lane4_3600STDY6184526_CATACTAC_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184527_CAATTGTT_L004_17480_1 lane4_3600STDY6184528_AAACCCGT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184529_CAGATTTC_L004_17480_1 lane4_3600STDY6184530_GCGTAGGT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184531_GGCATTCG_L004_17480_1 lane4_3600STDY6184532_TGGGGCTT_L004_17480_1 
#>                                        "03"                                       "021" 
#> lane4_3600STDY6184533_CTGACTAC_L004_17480_1 lane4_3600STDY6184534_AACTTTTA_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184535_AGGGATTC_L004_17480_1 lane4_3600STDY6184536_CCGAGTAG_L004_17480_1 
#>                                       "022"                                       "021" 
#> lane4_3600STDY6184537_GGGGACTA_L004_17480_1 lane4_3600STDY6184538_GGAGTTGA_L004_17480_1 
#>                                        "03"                                       "021" 
#> lane4_3600STDY6184539_AGCTCATC_L004_17480_1 lane4_3600STDY6184540_TAATCAAC_L004_17480_1 
#>                                       "021"                                        "03" 
#> lane4_3600STDY6184541_ACTGGTCG_L004_17480_1 lane4_3600STDY6184542_GACGATTG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184543_AGCGATGA_L004_17480_1 lane4_3600STDY6184544_GAAGAGAT_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184545_CGTATGCA_L004_17480_1 lane4_3600STDY6184546_CACGTGCG_L004_17480_1 
#>                                       "021"                                       "021" 
#> lane4_3600STDY6184547_GCTTAAAC_L004_17480_1 lane4_3600STDY6184548_GTTCCGCA_L004_17480_1 
#>                                        "03"                                       "022" 
#> lane4_3600STDY6184549_GTATCGTC_L004_17480_1 lane4_3600STDY6184550_GTCCTCAC_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184551_GTACGGAC_L004_17480_1 lane4_3600STDY6184552_CATTTTGC_L004_17480_1 
#>                                       "022"                                       "022" 
#> lane4_3600STDY6184553_TCCTCTCT_L004_17480_1 lane4_3600STDY6184554_AGCAACGA_L004_17480_1 
#>                                       "021"                                        "03" 
#> lane4_3600STDY6184555_ACAGAAGA_L004_17480_1 lane4_3600STDY6184556_CGACCCTT_L004_17480_1 
#>                                       "021"                                        "03" 
#> lane4_3600STDY6184557_CTGCCTAG_L004_17480_1 lane4_3600STDY6184558_GAGCGCAT_L004_17480_1 
#>                                       "021"                                       "022" 
#> lane4_3600STDY6184559_AACTTATC_L004_17480_1 lane4_3600STDY6184560_CCGATGTA_L004_17480_1 
#>                                        "03"                                       "021" 
#> lane4_3600STDY6184561_TTACTACC_L004_17480_1 lane4_3600STDY6184562_CAAGGAGC_L004_17480_1 
#>                                        "03"                                       "022" 
#> lane4_3600STDY6184563_TGGTTGAC_L004_17480_1 lane4_3600STDY6184564_ACCTGCTG_L004_17480_1 
#>                                       "022"                                       "022" 
#> lane1_3600STDY6183797_ATCACGTT_L001_17592_1 lane1_3600STDY6183798_CGATGTTT_L001_17592_1 
#>                                       "022"                                        "03" 
#> lane1_3600STDY6183799_TTAGGCAT_L001_17592_1 lane1_3600STDY6183800_TGACCACT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183801_ACAGTGGT_L001_17592_1 lane1_3600STDY6183802_GCCAATGT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183803_CAGATCTG_L001_17592_1 lane1_3600STDY6183804_ACTTGATG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183805_GATCAGCG_L001_17592_1 lane1_3600STDY6183806_TAGCTTGT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183807_GGCTACAG_L001_17592_1 lane1_3600STDY6183808_CTTGTACT_L001_17592_1 
#>                                        "03"                                       "022" 
#> lane1_3600STDY6183809_TGGTTGTT_L001_17592_1 lane1_3600STDY6183810_TCTCGGTT_L001_17592_1 
#>                                        "03"                                       "022" 
#> lane1_3600STDY6183811_TAAGCGTT_L001_17592_1 lane1_3600STDY6183812_TCCGTCTT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183813_TGTACCTT_L001_17592_1 lane1_3600STDY6183814_TTCTGTGT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183815_TCTGCTGT_L001_17592_1 lane1_3600STDY6183816_TTGGAGGT_L001_17592_1 
#>                                        "03"                                       "022" 
#> lane1_3600STDY6183817_TCGAGCGT_L001_17592_1 lane1_3600STDY6183818_TGATACGT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183819_TGCATAGT_L001_17592_1 lane1_3600STDY6183820_TTGACTCT_L001_17592_1 
#>                                        "03"                                       "022" 
#> lane1_3600STDY6183821_TGCGATCT_L001_17592_1 lane1_3600STDY6183822_TTCCTGCT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183823_TAGTGACT_L001_17592_1 lane1_3600STDY6183824_TACAGGAT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183825_TCCTCAAT_L001_17592_1 lane1_3600STDY6183826_TGTGGTTG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183827_TAGTCTTG_L001_17592_1 lane1_3600STDY6183828_TTCCATTG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183829_TCGAAGTG_L001_17592_1 lane1_3600STDY6183830_TAACGCTG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183831_TTGGTATG_L001_17592_1 lane1_3600STDY6183832_TGAACTGG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183833_TACTTCGG_L001_17592_1 lane1_3600STDY6183834_TCTCACGG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183835_TCAGGAGG_L001_17592_1 lane1_3600STDY6183836_TAAGTTCG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183837_TCCAGTCG_L001_17592_1 lane1_3600STDY6183838_TGTATGCG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183839_TCATTGAG_L001_17592_1 lane1_3600STDY6183840_TGGCTCAG_L001_17592_1 
#>                                       "023"                                        "03" 
#> lane1_3600STDY6183841_TATGCCAG_L001_17592_1 lane1_3600STDY6183842_TCAGATTC_L001_17592_1 
#>                                       "023"                                        "03" 
#> lane1_3600STDY6183843_TACTAGTC_L001_17592_1 lane1_3600STDY6183844_TTCAGCTC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183845_TGTCTATC_L001_17592_1 lane1_3600STDY6183846_TATGTGGC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183847_TTACTCGC_L001_17592_1 lane1_3600STDY6183848_TCGTTAGC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183849_TACCGAGC_L001_17592_1 lane1_3600STDY6183850_TGTTCTCC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183851_TTCGCACC_L001_17592_1 lane1_3600STDY6183852_TTGCGTAC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183853_TCTACGAC_L001_17592_1 lane1_3600STDY6183854_TGACAGAC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183855_TAGAACAC_L001_17592_1 lane1_3600STDY6183856_TCATCCTA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183857_TGCTGATA_L001_17592_1 lane1_3600STDY6183858_TAGACGGA_L001_17592_1 
#>                                       "023"                                        "03" 
#> lane1_3600STDY6183859_TGTGAAGA_L001_17592_1 lane1_3600STDY6183860_TCTCTTCA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183861_TTGTTCCA_L001_17592_1 lane1_3600STDY6183862_TGAAGCCA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183863_TACCACCA_L001_17592_1 lane1_3600STDY6183864_TGCGTGAA_L001_17592_1 
#>                                        "03"                                       "023" 
#> lane1_3600STDY6183865_GGTGAGTT_L001_17592_1 lane1_3600STDY6183866_GATCTCTT_L001_17592_1 
#>                                       "023"                                        "03" 
#> lane1_3600STDY6183867_GTGTCCTT_L001_17592_1 lane1_3600STDY6183868_GACGGATT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183869_GCAACATT_L001_17592_1 lane1_3600STDY6183870_GGTCGTGT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183871_GAATCTGT_L001_17592_1 lane1_3600STDY6183872_GTACATCT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183873_GAGGTGCT_L001_17592_1 lane1_3600STDY6183874_GCATGGCT_L001_17592_1 
#>                                        "03"                                       "023" 
#> lane1_3600STDY6183875_GTTAGCCT_L001_17592_1 lane1_3600STDY6183876_GTCGCTAT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183877_GGAATGAT_L001_17592_1 lane1_3600STDY6183878_GAGCCAAT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183879_GCTCCTTG_L001_17592_1 lane1_3600STDY6183880_GTAAGGTG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183881_GAGGATGG_L001_17592_1 lane1_3600STDY6183882_GTTGTCGG_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183883_GGATTAGG_L001_17592_1 lane1_3600STDY6183884_GATAGAGG_L001_17592_1 
#>                                        "03"                                       "023" 
#> lane1_3600STDY6183885_GTGTGTCG_L001_17592_1 lane1_3600STDY6183886_GCAATCCG_L001_17592_1 
#>                                       "023"                                       "022" 
#> lane1_3600STDY6183887_GACCTTAG_L001_17592_1 lane1_3600STDY6183888_GCCTGTTC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183889_GCACTGTC_L001_17592_1 lane1_3600STDY6183890_GCTAACTC_L001_17592_1 
#>                                       "023"                                        "03" 
#> lane1_3600STDY6183891_GATTCATC_L001_17592_1 lane1_3600STDY6183892_GTCTTGGC_L001_17592_1 
#>                                       "023"                                        "03" 
#> lane1_3600STDY6183893_GTAGAAGC_L001_17592_1 lane1_3600STDY6183894_GATGGTCC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183895_GTGCTACC_L001_17592_1 lane1_3600STDY6183896_GCGATTAC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183897_GGTTGGAC_L001_17592_1 lane1_3600STDY6183898_GGCACAAC_L001_17592_1 
#>                                        "03"                                       "023" 
#> lane1_3600STDY6183899_GACACTTA_L001_17592_1 lane1_3600STDY6183900_GTGCAGTA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183901_GGAGTCTA_L001_17592_1 lane1_3600STDY6183902_GCTATGGA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183903_GAGTGCGA_L001_17592_1 lane1_3600STDY6183904_GTAACCGA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183905_GGCAAGCA_L001_17592_1 lane1_3600STDY6183906_GCCTTACA_L001_17592_1 
#>                                       "023"                                        "03" 
#> lane1_3600STDY6183907_GAACGACA_L001_17592_1 lane1_3600STDY6183908_GCAGGTAA_L001_17592_1 
#>                                        "03"                                       "023" 
#> lane1_3600STDY6183909_GCGTCGAA_L001_17592_1 lane1_3600STDY6183910_CGTTCGGT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183911_CACCAGGT_L001_17592_1 lane1_3600STDY6183912_CTGCGAGT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183913_CCGTATCT_L001_17592_1 lane1_3600STDY6183914_CGCTTCCT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183915_CAAGACCT_L001_17592_1 lane1_3600STDY6183916_CACACACT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183917_CCTAGTAT_L001_17592_1 lane1_3600STDY6183918_CCACCGAT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183919_CTTCACAT_L001_17592_1 lane1_3600STDY6183920_CTATCATG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183921_CATGAATG_L001_17592_1 lane1_3600STDY6183922_CCACTTGG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183923_CTGTACGG_L001_17592_1 lane1_3600STDY6183924_CTAGATAG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183925_CACTCGAG_L001_17592_1 lane1_3600STDY6183926_CCGACAAG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183927_CTTGCTTC_L001_17592_1 lane1_3600STDY6183928_CATAGGTC_L001_17592_1 
#>                                       "023"                                       "021" 
#> lane1_3600STDY6183929_CACATTGC_L001_17592_1 lane1_3600STDY6183930_CGCTAAGC_L001_17592_1 
#>                                       "023"                                        "03" 
#> lane1_3600STDY6183931_CAACCTCC_L001_17592_1 lane1_3600STDY6183932_CAGCTGAC_L001_17592_1 
#>                                        "03"                                       "023" 
#> lane1_3600STDY6183933_CTCAAGAC_L001_17592_1 lane1_3600STDY6183934_CGTGTCAC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183935_CCATGCAC_L001_17592_1 lane1_3600STDY6183936_CGTTACTA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183937_CAAGTAGA_L001_17592_1 lane1_3600STDY6183938_CTCTCTCA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183939_CGACTGCA_L001_17592_1 lane1_3600STDY6183940_CCTGAGCA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183941_CAGGCTAA_L001_17592_1 lane1_3600STDY6183942_CGGAGGAA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183943_AGGAGATT_L001_17592_1 lane1_3600STDY6183944_AGGCAGCT_L001_17592_1 
#>                                        "03"                                       "021" 
#> lane1_3600STDY6183945_ACGTTCAT_L001_17592_1 lane1_3600STDY6183946_AACGTGTG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183947_AGACCGTG_L001_17592_1 lane1_3600STDY6183948_ACCTCTGG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183949_ATCCTAGG_L001_17592_1 lane1_3600STDY6183950_ATCAACCG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183951_AGGTCACG_L001_17592_1 lane1_3600STDY6183952_ACTGTTAG_L001_17592_1 
#>                                        "03"                                       "022" 
#> lane1_3600STDY6183953_AAGAGTAG_L001_17592_1 lane1_3600STDY6183954_ATTCGGAG_L001_17592_1 
#>                                       "023"                                        "03" 
#> lane1_3600STDY6183955_ACGCAATC_L001_17592_1 lane1_3600STDY6183956_ACAAGTGC_L001_17592_1 
#>                                        "03"                                       "023" 
#> lane1_3600STDY6183957_ATGGATCC_L001_17592_1 lane1_3600STDY6183958_AGAGGACC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183959_ATCTCCAC_L001_17592_1 lane1_3600STDY6183960_ATTGGCTA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183961_AATCCTGA_L001_17592_1 lane1_3600STDY6183962_AGGATTCA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183963_AACTGGCA_L001_17592_1 lane1_3600STDY6183964_ACAACGCA_L001_17592_1 
#>                                        "03"                                       "022" 
#> lane1_3600STDY6183965_CGGAAACA_L001_17592_1 lane1_3600STDY6183966_AATGAATT_L001_17592_1 
#>                                       "022"                                        "03" 
#> lane1_3600STDY6183967_TAGGACCC_L001_17592_1 lane1_3600STDY6183968_TCTCAGTG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183969_CATGGGAA_L001_17592_1 lane1_3600STDY6183970_CCTAAGAT_L001_17592_1 
#>                                        "03"                                       "023" 
#> lane1_3600STDY6183971_CTCAGATA_L001_17592_1 lane1_3600STDY6183972_CCCATAGG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183973_GCTATGAC_L001_17592_1 lane1_3600STDY6183974_GCTGTGAA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183975_ACCTTCAA_L001_17592_1 lane1_3600STDY6183976_ACAAAGCC_L001_17592_1 
#>                                       "023"                                       "021" 
#> lane1_3600STDY6183977_CAAAACCG_L001_17592_1 lane1_3600STDY6183978_GCTGGACA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183979_AAGTCGTA_L001_17592_1 lane1_3600STDY6183980_CATCCGTA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183981_TTGTGTCT_L001_17592_1 lane1_3600STDY6183982_TGCTCTAG_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183983_ACCCAACA_L001_17592_1 lane1_3600STDY6183984_CGATCTGA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183985_GTTCCACG_L001_17592_1 lane1_3600STDY6183986_ACTCTTTC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183987_TATTGGAG_L001_17592_1 lane1_3600STDY6183988_TAAACATA_L001_17592_1 
#>                                       "023"                                       "022" 
#> lane1_3600STDY6183989_GTAAGATA_L001_17592_1 lane1_3600STDY6183990_TACCGCAA_L001_17592_1 
#>                                       "022"                                        "03" 
#> lane1_3600STDY6183991_TATCTCCT_L001_17592_1 lane1_3600STDY6183992_TGTCATCT_L001_17592_1 
#>                                        "03"                                       "023" 
#> lane1_3600STDY6183993_ATAGCTCT_L001_17592_1 lane1_3600STDY6183994_AGTCCAAC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183995_TTTGGGCA_L001_17592_1 lane1_3600STDY6183996_TCTGACGC_L001_17592_1 
#>                                        "03"                                       "023" 
#> lane1_3600STDY6183997_TGTCGACT_L001_17592_1 lane1_3600STDY6183998_GTCACGTA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6183999_TTGAGCGA_L001_17592_1 lane1_3600STDY6184000_GAGACATA_L001_17592_1 
#>                                       "023"                                        "03" 
#> lane1_3600STDY6184001_GTCAAGCT_L001_17592_1 lane1_3600STDY6184002_AGCAAGTT_L001_17592_1 
#>                                       "022"                                        "03" 
#> lane1_3600STDY6184003_GACGCTCA_L001_17592_1 lane1_3600STDY6184004_ACGGCAGC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184005_AGAACTGA_L001_17592_1 lane1_3600STDY6184006_CGCCTTTG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184007_TAAGGTCA_L001_17592_1 lane1_3600STDY6184008_ACGTTGGC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184009_CCAGCTTA_L001_17592_1 lane1_3600STDY6184010_GAATCCTA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184011_ACTTCGTA_L001_17592_1 lane1_3600STDY6184012_TAGTCGGT_L001_17592_1 
#>                                       "022"                                        "03" 
#> lane1_3600STDY6184013_CGCACGAG_L001_17592_1 lane1_3600STDY6184014_ACGTACTA_L001_17592_1 
#>                                        "03"                                       "023" 
#> lane1_3600STDY6184015_AGCGCCAA_L001_17592_1 lane1_3600STDY6184016_GCCTGCCC_L001_17592_1 
#>                                        "03"                                       "023" 
#> lane1_3600STDY6184017_AGGACGAT_L001_17592_1 lane1_3600STDY6184018_CTTGACCG_L001_17592_1 
#>                                        "03"                                       "023" 
#> lane1_3600STDY6184019_AGGTCTAA_L001_17592_1 lane1_3600STDY6184020_CGAGATCC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184021_ATTAGCGG_L001_17592_1 lane1_3600STDY6184022_GCGCTGAT_L001_17592_1 
#>                                        "03"                                       "023" 
#> lane1_3600STDY6184023_TGCTGAAC_L001_17592_1 lane1_3600STDY6184024_GAGGGCAG_L001_17592_1 
#>                                       "022"                                        "03" 
#> lane1_3600STDY6184025_GTTTTCAC_L001_17592_1 lane1_3600STDY6184026_GAGATGCC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184027_TTGAGAAG_L001_17592_1 lane1_3600STDY6184028_GCATCCGG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184029_GTCACCAG_L001_17592_1 lane1_3600STDY6184030_GAGGTCGC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184031_AAGGGGTA_L001_17592_1 lane1_3600STDY6184032_TTTTACGT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184033_TTCCTACA_L001_17592_1 lane1_3600STDY6184034_AGTGTAGT_L001_17592_1 
#>                                        "03"                                       "023" 
#> lane1_3600STDY6184035_GTGGCCAA_L001_17592_1 lane1_3600STDY6184036_AAATACTC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184037_CACCCGTC_L001_17592_1 lane1_3600STDY6184038_TCGTGGTT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184039_ACTTGGGG_L001_17592_1 lane1_3600STDY6184040_GGCTGCTT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184041_CAGGGTCG_L001_17592_1 lane1_3600STDY6184042_CTCGTCGA_L001_17592_1 
#>                                        "03"                                       "023" 
#> lane1_3600STDY6184043_TCTACAGT_L001_17592_1 lane1_3600STDY6184044_CTTCTAGA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184045_AACGGCTT_L001_17592_1 lane1_3600STDY6184046_ATAAGACT_L001_17592_1 
#>                                        "03"                                       "023" 
#> lane1_3600STDY6184047_GTTTTTCG_L001_17592_1 lane1_3600STDY6184048_ATTGGTAT_L001_17592_1 
#>                                       "023"                                        "03" 
#> lane1_3600STDY6184049_CGCCAGTA_L001_17592_1 lane1_3600STDY6184050_AAGCCGAA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184051_TGACCCAC_L001_17592_1 lane1_3600STDY6184052_ATTGCACA_L001_17592_1 
#>                                       "023"                                        "03" 
#> lane1_3600STDY6184053_CTTTTGAT_L001_17592_1 lane1_3600STDY6184054_TAGCGAGA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184055_TTCGCAGG_L001_17592_1 lane1_3600STDY6184056_TAGTTATT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184057_TCCTCCGA_L001_17592_1 lane1_3600STDY6184058_GCGGGTCT_L001_17592_1 
#>                                        "03"                                       "023" 
#> lane1_3600STDY6184059_GATTCTAT_L001_17592_1 lane1_3600STDY6184060_ATGCAAAG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184061_GTCTGAGG_L001_17592_1 lane1_3600STDY6184062_TCTGGCGA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184063_AATTTGCG_L001_17592_1 lane1_3600STDY6184064_TGGGTTGG_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184065_AGTTGAAA_L001_17592_1 lane1_3600STDY6184066_GACCGGAA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184067_GATCGAAC_L001_17592_1 lane1_3600STDY6184068_GTATAGGG_L001_17592_1 
#>                                       "022"                                       "022" 
#> lane1_3600STDY6184069_GGTAAGAG_L001_17592_1 lane1_3600STDY6184070_AGTCCGAT_L001_17592_1 
#>                                        "03"                                       "023" 
#> lane1_3600STDY6184071_ATACAGGC_L001_17592_1 lane1_3600STDY6184072_TGAGACTC_L001_17592_1 
#>                                       "023"                                        "03" 
#> lane1_3600STDY6184073_ACTCAGGA_L001_17592_1 lane1_3600STDY6184074_GTGTCTGA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184075_CTTGAATC_L001_17592_1 lane1_3600STDY6184076_CCGCATGA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184077_AAGTAACA_L001_17592_1 lane1_3600STDY6184078_GTGGTACT_L001_17592_1 
#>                                        "03"                                       "023" 
#> lane1_3600STDY6184079_AGCTGTGC_L001_17592_1 lane1_3600STDY6184080_TTACCTTC_L001_17592_1 
#>                                       "022"                                        "03" 
#> lane1_3600STDY6184081_TCCGGGTA_L001_17592_1 lane1_3600STDY6184082_CTACGTAA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184083_TCGGACCG_L001_17592_1 lane1_3600STDY6184084_ATGCGTCG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184085_TTCTTAGC_L001_17592_1 lane1_3600STDY6184086_TGAGTAAG_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184087_AAGTGATA_L001_17592_1 lane1_3600STDY6184088_TCGATGCG_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184089_TATTCTGG_L001_17592_1 lane1_3600STDY6184090_AGCCGTGA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184091_AAGCCTTC_L001_17592_1 lane1_3600STDY6184092_AGGTATCC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184093_AGGATCTC_L001_17592_1 lane1_3600STDY6184094_CTGTTTGA_L001_17592_1 
#>                                        "03"                                       "023" 
#> lane1_3600STDY6184095_GGAATTTC_L001_17592_1 lane1_3600STDY6184096_TTGGAGCA_L001_17592_1 
#>                                       "023"                                        "03" 
#> lane1_3600STDY6184097_AAGGTCTG_L001_17592_1 lane1_3600STDY6184098_AATTAGGC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184099_AATCGGGT_L001_17592_1 lane1_3600STDY6184100_AGGTAGAC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184101_CTTATTCC_L001_17592_1 lane1_3600STDY6184102_CAGGCTCT_L001_17592_1 
#>                                        "03"                                       "023" 
#> lane1_3600STDY6184103_AAAGCACG_L001_17592_1 lane1_3600STDY6184104_GTATACAC_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184105_GGACATAT_L001_17592_1 lane1_3600STDY6184106_CGGTTGGG_L001_17592_1 
#>                                       "022"                                       "023" 
#> lane1_3600STDY6184107_GTCCGTGA_L001_17592_1 lane1_3600STDY6184108_GCCGAACC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184109_ACTTTACT_L001_17592_1 lane1_3600STDY6184110_GGGTCCAT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184111_ATAACTAG_L001_17592_1 lane1_3600STDY6184112_AATAGAGA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184113_TCACCATT_L001_17592_1 lane1_3600STDY6184114_CGCCTGAT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184115_GCGTGAAC_L001_17592_1 lane1_3600STDY6184116_TAAGGGTG_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184117_GGTGTCGA_L001_17592_1 lane1_3600STDY6184118_CCGTTAGG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184119_TGGCAAAA_L001_17592_1 lane1_3600STDY6184120_CCTACCCG_L001_17592_1 
#>                                       "023"                                        "03" 
#> lane1_3600STDY6184121_AACAGCGC_L001_17592_1 lane1_3600STDY6184122_TATACATC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184123_AAGCGACT_L001_17592_1 lane1_3600STDY6184124_GAAGCGCA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184125_ACCTCTAC_L001_17592_1 lane1_3600STDY6184126_GATTGCGT_L001_17592_1 
#>                                        "03"                                       "023" 
#> lane1_3600STDY6184127_GCTGGTTG_L001_17592_1 lane1_3600STDY6184128_ATCGTCCT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184129_GGACACGG_L001_17592_1 lane1_3600STDY6184130_CGCACCTA_L001_17592_1 
#>                                        "03"                                       "023" 
#> lane1_3600STDY6184131_CTTCGGCT_L001_17592_1 lane1_3600STDY6184132_CGAATCGA_L001_17592_1 
#>                                        "03"                                       "022" 
#> lane1_3600STDY6184133_TAACAACT_L001_17592_1 lane1_3600STDY6184134_AGCTCTTT_L001_17592_1 
#>                                        "03"                                       "023" 
#> lane1_3600STDY6184135_TAATCCCT_L001_17592_1 lane1_3600STDY6184136_AGGACACT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184137_TTACACTA_L001_17592_1 lane1_3600STDY6184138_AAACATCA_L001_17592_1 
#>                                        "03"                                       "023" 
#> lane1_3600STDY6184139_CCATAGCT_L001_17592_1 lane1_3600STDY6184140_GTTATGGC_L001_17592_1 
#>                                        "03"                                       "023" 
#> lane1_3600STDY6184141_ATCCCCTA_L001_17592_1 lane1_3600STDY6184142_CATACTAC_L001_17592_1 
#>                                       "023"                                        "03" 
#> lane1_3600STDY6184143_CAATTGTT_L001_17592_1 lane1_3600STDY6184144_AAACCCGT_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184145_CAGATTTC_L001_17592_1 lane1_3600STDY6184146_GCGTAGGT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184147_GGCATTCG_L001_17592_1 lane1_3600STDY6184148_TGGGGCTT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184149_CTGACTAC_L001_17592_1 lane1_3600STDY6184150_AACTTTTA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184151_AGGGATTC_L001_17592_1 lane1_3600STDY6184152_CCGAGTAG_L001_17592_1 
#>                                       "023"                                        "03" 
#> lane1_3600STDY6184153_GGGGACTA_L001_17592_1 lane1_3600STDY6184154_GGAGTTGA_L001_17592_1 
#>                                        "03"                                       "023" 
#> lane1_3600STDY6184155_AGCTCATC_L001_17592_1 lane1_3600STDY6184156_TAATCAAC_L001_17592_1 
#>                                        "03"                                       "022" 
#> lane1_3600STDY6184157_ACTGGTCG_L001_17592_1 lane1_3600STDY6184158_GACGATTG_L001_17592_1 
#>                                        "03"                                       "023" 
#> lane1_3600STDY6184159_AGCGATGA_L001_17592_1 lane1_3600STDY6184160_GAAGAGAT_L001_17592_1 
#>                                        "03"                                       "023" 
#> lane1_3600STDY6184161_CGTATGCA_L001_17592_1 lane1_3600STDY6184162_CACGTGCG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184163_GCTTAAAC_L001_17592_1 lane1_3600STDY6184164_GTTCCGCA_L001_17592_1 
#>                                       "023"                                       "023" 
#> lane1_3600STDY6184165_GTATCGTC_L001_17592_1 lane1_3600STDY6184166_GTCCTCAC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184167_GTACGGAC_L001_17592_1 lane1_3600STDY6184168_CATTTTGC_L001_17592_1 
#>                                       "023"                                        "03" 
#> lane1_3600STDY6184169_TCCTCTCT_L001_17592_1 lane1_3600STDY6184170_AGCAACGA_L001_17592_1 
#>                                        "03"                                       "023" 
#> lane1_3600STDY6184171_ACAGAAGA_L001_17592_1 lane1_3600STDY6184172_CGACCCTT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184173_CTGCCTAG_L001_17592_1 lane1_3600STDY6184174_GAGCGCAT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184175_AACTTATC_L001_17592_1 lane1_3600STDY6184176_CCGATGTA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184177_TTACTACC_L001_17592_1 lane1_3600STDY6184178_CAAGGAGC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184179_TGGTTGAC_L001_17592_1 lane1_3600STDY6184180_ACCTGCTG_L001_17592_1 
#>                                        "03"                                       "022"

show/hide code output

get_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 10635))
#> lane1_3600STDY6077864_ATCACGTT_L001_15986_1 lane1_3600STDY6077865_CGATGTTT_L001_15986_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6077866_TTAGGCAT_L001_15986_1 lane1_3600STDY6077867_TGACCACT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077868_ACAGTGGT_L001_15986_1 lane1_3600STDY6077869_GCCAATGT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077870_CAGATCTG_L001_15986_1 lane1_3600STDY6077871_ACTTGATG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077872_GATCAGCG_L001_15986_1 lane1_3600STDY6077873_TAGCTTGT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077874_GGCTACAG_L001_15986_1 lane1_3600STDY6077875_CTTGTACT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077876_TGGTTGTT_L001_15986_1 lane1_3600STDY6077877_TCTCGGTT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077878_TAAGCGTT_L001_15986_1 lane1_3600STDY6077879_TCCGTCTT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077880_TGTACCTT_L001_15986_1 lane1_3600STDY6077881_TTCTGTGT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077882_TCTGCTGT_L001_15986_1 lane1_3600STDY6077883_TTGGAGGT_L001_15986_1 
#>                                      "0121"                                        "02" 
#> lane1_3600STDY6077884_TCGAGCGT_L001_15986_1 lane1_3600STDY6077885_TGATACGT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077886_TGCATAGT_L001_15986_1 lane1_3600STDY6077887_TTGACTCT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077888_TGCGATCT_L001_15986_1 lane1_3600STDY6077889_TTCCTGCT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077890_TAGTGACT_L001_15986_1 lane1_3600STDY6077891_TACAGGAT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077892_TCCTCAAT_L001_15986_1 lane1_3600STDY6077893_TGTGGTTG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077894_TAGTCTTG_L001_15986_1 lane1_3600STDY6077895_TTCCATTG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077896_TCGAAGTG_L001_15986_1 lane1_3600STDY6077897_TAACGCTG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077898_TTGGTATG_L001_15986_1 lane1_3600STDY6077899_TGAACTGG_L001_15986_1 
#>                                      "0121"                                        "02" 
#> lane1_3600STDY6077900_TACTTCGG_L001_15986_1 lane1_3600STDY6077901_TCTCACGG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077902_TCAGGAGG_L001_15986_1 lane1_3600STDY6077903_TAAGTTCG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077904_TCCAGTCG_L001_15986_1 lane1_3600STDY6077905_TGTATGCG_L001_15986_1 
#>                                        "02"                                      "0121" 
#> lane1_3600STDY6077906_TCATTGAG_L001_15986_1 lane1_3600STDY6077907_TGGCTCAG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077908_TATGCCAG_L001_15986_1 lane1_3600STDY6077909_TCAGATTC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077910_TACTAGTC_L001_15986_1 lane1_3600STDY6077911_TTCAGCTC_L001_15986_1 
#>                                      "0121"                                        "02" 
#> lane1_3600STDY6077912_TGTCTATC_L001_15986_1 lane1_3600STDY6077913_TATGTGGC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077914_TTACTCGC_L001_15986_1 lane1_3600STDY6077915_TCGTTAGC_L001_15986_1 
#>                                        "02"                                      "0121" 
#> lane1_3600STDY6077916_TACCGAGC_L001_15986_1 lane1_3600STDY6077917_TGTTCTCC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077918_TTCGCACC_L001_15986_1 lane1_3600STDY6077919_TTGCGTAC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077920_TCTACGAC_L001_15986_1 lane1_3600STDY6077921_TGACAGAC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077922_TAGAACAC_L001_15986_1 lane1_3600STDY6077923_TCATCCTA_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077924_TGCTGATA_L001_15986_1 lane1_3600STDY6077925_TAGACGGA_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077926_TGTGAAGA_L001_15986_1 lane1_3600STDY6077927_TCTCTTCA_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077928_TTGTTCCA_L001_15986_1 lane1_3600STDY6077929_TGAAGCCA_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077930_TACCACCA_L001_15986_1 lane1_3600STDY6077931_TGCGTGAA_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077932_GGTGAGTT_L001_15986_1 lane1_3600STDY6077933_GATCTCTT_L001_15986_1 
#>                                      "0121"                                        "02" 
#> lane1_3600STDY6077934_GTGTCCTT_L001_15986_1 lane1_3600STDY6077935_GACGGATT_L001_15986_1 
#>                                        "02"                                      "0121" 
#> lane1_3600STDY6077936_GCAACATT_L001_15986_1 lane1_3600STDY6077937_GGTCGTGT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077938_GAATCTGT_L001_15986_1 lane1_3600STDY6077939_GTACATCT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077940_GAGGTGCT_L001_15986_1 lane1_3600STDY6077941_GCATGGCT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077942_GTTAGCCT_L001_15986_1 lane1_3600STDY6077943_GTCGCTAT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077944_GGAATGAT_L001_15986_1 lane1_3600STDY6077945_GAGCCAAT_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077946_GCTCCTTG_L001_15986_1 lane1_3600STDY6077947_GTAAGGTG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077948_GAGGATGG_L001_15986_1 lane1_3600STDY6077949_GTTGTCGG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077950_GGATTAGG_L001_15986_1 lane1_3600STDY6077951_GATAGAGG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077952_GTGTGTCG_L001_15986_1 lane1_3600STDY6077953_GCAATCCG_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077954_GACCTTAG_L001_15986_1 lane1_3600STDY6077955_GCCTGTTC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077956_GCACTGTC_L001_15986_1 lane1_3600STDY6077957_GCTAACTC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane1_3600STDY6077958_GATTCATC_L001_15986_1 lane1_3600STDY6077959_GTCTTGGC_L001_15986_1 
#>                                      "0121"                                      "0121" 
#> lane3_3600STDY6077960_ATCACGTT_L003_15987_1 lane3_3600STDY6077961_CGATGTTT_L003_15987_1 
#>                                        "02"                                        "02" 
#> lane3_3600STDY6077962_TTAGGCAT_L003_15987_1 lane3_3600STDY6077963_TGACCACT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077964_ACAGTGGT_L003_15987_1 lane3_3600STDY6077965_GCCAATGT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077966_CAGATCTG_L003_15987_1 lane3_3600STDY6077967_ACTTGATG_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077968_GATCAGCG_L003_15987_1 lane3_3600STDY6077969_TAGCTTGT_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6077970_GGCTACAG_L003_15987_1 lane3_3600STDY6077971_CTTGTACT_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6077972_TGGTTGTT_L003_15987_1 lane3_3600STDY6077973_TCTCGGTT_L003_15987_1 
#>                                      "0123"                                      "0122" 
#> lane3_3600STDY6077974_TAAGCGTT_L003_15987_1 lane3_3600STDY6077975_TCCGTCTT_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6077976_TGTACCTT_L003_15987_1 lane3_3600STDY6077977_TTCTGTGT_L003_15987_1 
#>                                      "0123"                                      "0122" 
#> lane3_3600STDY6077978_TCTGCTGT_L003_15987_1 lane3_3600STDY6077979_TTGGAGGT_L003_15987_1 
#>                                        "02"                                      "0122" 
#> lane3_3600STDY6077980_TCGAGCGT_L003_15987_1 lane3_3600STDY6077981_TGATACGT_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6077982_TGCATAGT_L003_15987_1 lane3_3600STDY6077983_TTGACTCT_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6077984_TGCGATCT_L003_15987_1 lane3_3600STDY6077985_TTCCTGCT_L003_15987_1 
#>                                      "0123"                                      "0122" 
#> lane3_3600STDY6077986_TAGTGACT_L003_15987_1 lane3_3600STDY6077987_TACAGGAT_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6077988_TCCTCAAT_L003_15987_1 lane3_3600STDY6077989_TGTGGTTG_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6077990_TAGTCTTG_L003_15987_1 lane3_3600STDY6077991_TTCCATTG_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6077992_TCGAAGTG_L003_15987_1 lane3_3600STDY6077993_TAACGCTG_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6077994_TTGGTATG_L003_15987_1 lane3_3600STDY6077995_TGAACTGG_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6077996_TACTTCGG_L003_15987_1 lane3_3600STDY6077997_TCTCACGG_L003_15987_1 
#>                                      "0122"                                        "02" 
#> lane3_3600STDY6077998_TCAGGAGG_L003_15987_1 lane3_3600STDY6077999_TAAGTTCG_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078000_TCCAGTCG_L003_15987_1 lane3_3600STDY6078001_TGTATGCG_L003_15987_1 
#>                                      "0122"                                        "02" 
#> lane3_3600STDY6078002_TCATTGAG_L003_15987_1 lane3_3600STDY6078003_TGGCTCAG_L003_15987_1 
#>                                        "03"                                      "0122" 
#> lane3_3600STDY6078004_TATGCCAG_L003_15987_1 lane3_3600STDY6078005_TCAGATTC_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6078006_TACTAGTC_L003_15987_1 lane3_3600STDY6078007_TTCAGCTC_L003_15987_1 
#>                                      "0123"                                      "0122" 
#> lane3_3600STDY6078008_TGTCTATC_L003_15987_1 lane3_3600STDY6078009_TATGTGGC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078010_TTACTCGC_L003_15987_1 lane3_3600STDY6078011_TCGTTAGC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078012_TACCGAGC_L003_15987_1 lane3_3600STDY6078013_TGTTCTCC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078014_TTCGCACC_L003_15987_1 lane3_3600STDY6078015_TTGCGTAC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078016_TCTACGAC_L003_15987_1 lane3_3600STDY6078017_TGACAGAC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078018_TAGAACAC_L003_15987_1 lane3_3600STDY6078019_TCATCCTA_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078020_TGCTGATA_L003_15987_1 lane3_3600STDY6078021_TAGACGGA_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078022_TGTGAAGA_L003_15987_1 lane3_3600STDY6078023_TCTCTTCA_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078024_TTGTTCCA_L003_15987_1 lane3_3600STDY6078025_TGAAGCCA_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078026_TACCACCA_L003_15987_1 lane3_3600STDY6078027_TGCGTGAA_L003_15987_1 
#>                                      "0123"                                        "02" 
#> lane3_3600STDY6078028_GGTGAGTT_L003_15987_1 lane3_3600STDY6078029_GATCTCTT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078030_GTGTCCTT_L003_15987_1 lane3_3600STDY6078031_GACGGATT_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078032_GCAACATT_L003_15987_1 lane3_3600STDY6078033_GGTCGTGT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078034_GAATCTGT_L003_15987_1 lane3_3600STDY6078035_GTACATCT_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6078036_GAGGTGCT_L003_15987_1 lane3_3600STDY6078037_GCATGGCT_L003_15987_1 
#>                                      "0123"                                      "0122" 
#> lane3_3600STDY6078038_GTTAGCCT_L003_15987_1 lane3_3600STDY6078039_GTCGCTAT_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078040_GGAATGAT_L003_15987_1 lane3_3600STDY6078041_GAGCCAAT_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078042_GCTCCTTG_L003_15987_1 lane3_3600STDY6078043_GTAAGGTG_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078044_GAGGATGG_L003_15987_1 lane3_3600STDY6078045_GTTGTCGG_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078046_GGATTAGG_L003_15987_1 lane3_3600STDY6078047_GATAGAGG_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane3_3600STDY6078048_GTGTGTCG_L003_15987_1 lane3_3600STDY6078049_GCAATCCG_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078050_GACCTTAG_L003_15987_1 lane3_3600STDY6078051_GCCTGTTC_L003_15987_1 
#>                                      "0122"                                      "0122" 
#> lane3_3600STDY6078052_GCACTGTC_L003_15987_1 lane3_3600STDY6078053_GCTAACTC_L003_15987_1 
#>                                      "0122"                                      "0123" 
#> lane3_3600STDY6078054_GATTCATC_L003_15987_1 lane3_3600STDY6078055_GTCTTGGC_L003_15987_1 
#>                                      "0123"                                      "0123" 
#> lane1_3600STDY6167693_ATCACGTT_L001_17236_1 lane1_3600STDY6167694_CGATGTTT_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167695_TTAGGCAT_L001_17236_1 lane1_3600STDY6167696_TGACCACT_L001_17236_1 
#>                                        "03"                                       "011" 
#> lane1_3600STDY6167697_ACAGTGGT_L001_17236_1 lane1_3600STDY6167698_GCCAATGT_L001_17236_1 
#>                                        "02"                                       "011" 
#> lane1_3600STDY6167699_CAGATCTG_L001_17236_1 lane1_3600STDY6167700_ACTTGATG_L001_17236_1 
#>                                       "011"                                        "02" 
#> lane1_3600STDY6167701_GATCAGCG_L001_17236_1 lane1_3600STDY6167702_TAGCTTGT_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167703_GGCTACAG_L001_17236_1 lane1_3600STDY6167704_CTTGTACT_L001_17236_1 
#>                                       "014"                                        "03" 
#> lane1_3600STDY6167705_TGGTTGTT_L001_17236_1 lane1_3600STDY6167706_TCTCGGTT_L001_17236_1 
#>                                       "014"                                        "02" 
#> lane1_3600STDY6167707_TAAGCGTT_L001_17236_1 lane1_3600STDY6167708_TCCGTCTT_L001_17236_1 
#>                                        "02"                                       "013" 
#> lane1_3600STDY6167709_TGTACCTT_L001_17236_1 lane1_3600STDY6167710_TTCTGTGT_L001_17236_1 
#>                                       "011"                                        "02" 
#> lane1_3600STDY6167711_TCTGCTGT_L001_17236_1 lane1_3600STDY6167712_TTGGAGGT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167713_TCGAGCGT_L001_17236_1 lane1_3600STDY6167714_TGATACGT_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167715_TGCATAGT_L001_17236_1 lane1_3600STDY6167716_TTGACTCT_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167717_TGCGATCT_L001_17236_1 lane1_3600STDY6167718_TTCCTGCT_L001_17236_1 
#>                                       "013"                                        "02" 
#> lane1_3600STDY6167719_TAGTGACT_L001_17236_1 lane1_3600STDY6167720_TACAGGAT_L001_17236_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6167721_TCCTCAAT_L001_17236_1 lane1_3600STDY6167722_TGTGGTTG_L001_17236_1 
#>                                        "03"                                       "011" 
#> lane1_3600STDY6167723_TAGTCTTG_L001_17236_1 lane1_3600STDY6167724_TTCCATTG_L001_17236_1 
#>                                       "011"                                        "02" 
#> lane1_3600STDY6167725_TCGAAGTG_L001_17236_1 lane1_3600STDY6167726_TAACGCTG_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167727_TTGGTATG_L001_17236_1 lane1_3600STDY6167728_TGAACTGG_L001_17236_1 
#>                                       "013"                                      "0121" 
#> lane1_3600STDY6167729_TACTTCGG_L001_17236_1 lane1_3600STDY6167730_TCTCACGG_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167731_TCAGGAGG_L001_17236_1 lane1_3600STDY6167732_TAAGTTCG_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167733_TCCAGTCG_L001_17236_1 lane1_3600STDY6167734_TGTATGCG_L001_17236_1 
#>                                       "011"                                        "02" 
#> lane1_3600STDY6167735_TCATTGAG_L001_17236_1 lane1_3600STDY6167736_TGGCTCAG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167737_TATGCCAG_L001_17236_1 lane1_3600STDY6167738_TCAGATTC_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167739_TACTAGTC_L001_17236_1 lane1_3600STDY6167740_TTCAGCTC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167741_TGTCTATC_L001_17236_1 lane1_3600STDY6167742_TATGTGGC_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167743_TTACTCGC_L001_17236_1 lane1_3600STDY6167744_TCGTTAGC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167745_TACCGAGC_L001_17236_1 lane1_3600STDY6167746_TGTTCTCC_L001_17236_1 
#>                                        "03"                                       "011" 
#> lane1_3600STDY6167747_TTCGCACC_L001_17236_1 lane1_3600STDY6167748_TTGCGTAC_L001_17236_1 
#>                                        "03"                                       "011" 
#> lane1_3600STDY6167749_TCTACGAC_L001_17236_1 lane1_3600STDY6167750_TGACAGAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167751_TAGAACAC_L001_17236_1 lane1_3600STDY6167752_TCATCCTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167753_TGCTGATA_L001_17236_1 lane1_3600STDY6167754_TAGACGGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167755_TGTGAAGA_L001_17236_1 lane1_3600STDY6167756_TCTCTTCA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167757_TTGTTCCA_L001_17236_1 lane1_3600STDY6167758_TGAAGCCA_L001_17236_1 
#>                                       "011"                                        "02" 
#> lane1_3600STDY6167759_TACCACCA_L001_17236_1 lane1_3600STDY6167760_TGCGTGAA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167761_GGTGAGTT_L001_17236_1 lane1_3600STDY6167762_GATCTCTT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167763_GTGTCCTT_L001_17236_1 lane1_3600STDY6167764_GACGGATT_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167765_GCAACATT_L001_17236_1 lane1_3600STDY6167766_GGTCGTGT_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167767_GAATCTGT_L001_17236_1 lane1_3600STDY6167768_GTACATCT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167769_GAGGTGCT_L001_17236_1 lane1_3600STDY6167770_GCATGGCT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167771_GTTAGCCT_L001_17236_1 lane1_3600STDY6167772_GTCGCTAT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167773_GGAATGAT_L001_17236_1 lane1_3600STDY6167774_GAGCCAAT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167775_GCTCCTTG_L001_17236_1 lane1_3600STDY6167776_GTAAGGTG_L001_17236_1 
#>                                       "011"                                        "02" 
#> lane1_3600STDY6167777_GAGGATGG_L001_17236_1 lane1_3600STDY6167778_GTTGTCGG_L001_17236_1 
#>                                       "011"                                        "02" 
#> lane1_3600STDY6167779_GGATTAGG_L001_17236_1 lane1_3600STDY6167780_GATAGAGG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167781_GTGTGTCG_L001_17236_1 lane1_3600STDY6167782_GCAATCCG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167783_GACCTTAG_L001_17236_1 lane1_3600STDY6167784_GCCTGTTC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167785_GCACTGTC_L001_17236_1 lane1_3600STDY6167786_GCTAACTC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167787_GATTCATC_L001_17236_1 lane1_3600STDY6167788_GTCTTGGC_L001_17236_1 
#>                                       "011"                                        "02" 
#> lane1_3600STDY6167789_GTAGAAGC_L001_17236_1 lane1_3600STDY6167790_GATGGTCC_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167791_GTGCTACC_L001_17236_1 lane1_3600STDY6167792_GCGATTAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167793_GGTTGGAC_L001_17236_1 lane1_3600STDY6167794_GGCACAAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167795_GACACTTA_L001_17236_1 lane1_3600STDY6167796_GTGCAGTA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167797_GGAGTCTA_L001_17236_1 lane1_3600STDY6167798_GCTATGGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167799_GAGTGCGA_L001_17236_1 lane1_3600STDY6167800_GTAACCGA_L001_17236_1 
#>                                        "03"                                       "011" 
#> lane1_3600STDY6167801_GGCAAGCA_L001_17236_1 lane1_3600STDY6167802_GCCTTACA_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167803_GAACGACA_L001_17236_1 lane1_3600STDY6167804_GCAGGTAA_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167805_GCGTCGAA_L001_17236_1 lane1_3600STDY6167806_CGTTCGGT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167807_CACCAGGT_L001_17236_1 lane1_3600STDY6167808_CTGCGAGT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167809_CCGTATCT_L001_17236_1 lane1_3600STDY6167810_CGCTTCCT_L001_17236_1 
#>                                       "011"                                        "02" 
#> lane1_3600STDY6167811_CAAGACCT_L001_17236_1 lane1_3600STDY6167812_CACACACT_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167813_CCTAGTAT_L001_17236_1 lane1_3600STDY6167814_CCACCGAT_L001_17236_1 
#>                                        "02"                                       "011" 
#> lane1_3600STDY6167815_CTTCACAT_L001_17236_1 lane1_3600STDY6167816_CTATCATG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167817_CATGAATG_L001_17236_1 lane1_3600STDY6167818_CCACTTGG_L001_17236_1 
#>                                        "03"                                       "011" 
#> lane1_3600STDY6167819_CTGTACGG_L001_17236_1 lane1_3600STDY6167820_CTAGATAG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167821_CACTCGAG_L001_17236_1 lane1_3600STDY6167822_CCGACAAG_L001_17236_1 
#>                                        "03"                                       "013" 
#> lane1_3600STDY6167823_CTTGCTTC_L001_17236_1 lane1_3600STDY6167824_CATAGGTC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167825_CACATTGC_L001_17236_1 lane1_3600STDY6167826_CGCTAAGC_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167827_CAACCTCC_L001_17236_1 lane1_3600STDY6167828_CAGCTGAC_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167829_CTCAAGAC_L001_17236_1 lane1_3600STDY6167830_CGTGTCAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167831_CCATGCAC_L001_17236_1 lane1_3600STDY6167832_CGTTACTA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167833_CAAGTAGA_L001_17236_1 lane1_3600STDY6167834_CTCTCTCA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167835_CGACTGCA_L001_17236_1 lane1_3600STDY6167836_CCTGAGCA_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167837_CAGGCTAA_L001_17236_1 lane1_3600STDY6167838_CGGAGGAA_L001_17236_1 
#>                                       "014"                                       "011" 
#> lane1_3600STDY6167839_AGGAGATT_L001_17236_1 lane1_3600STDY6167840_AGGCAGCT_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167841_ACGTTCAT_L001_17236_1 lane1_3600STDY6167842_AACGTGTG_L001_17236_1 
#>                                        "03"                                       "013" 
#> lane1_3600STDY6167843_AGACCGTG_L001_17236_1 lane1_3600STDY6167844_ACCTCTGG_L001_17236_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6167845_ATCCTAGG_L001_17236_1 lane1_3600STDY6167846_ATCAACCG_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167847_AGGTCACG_L001_17236_1 lane1_3600STDY6167848_ACTGTTAG_L001_17236_1 
#>                                        "02"                                       "013" 
#> lane1_3600STDY6167849_AAGAGTAG_L001_17236_1 lane1_3600STDY6167850_ATTCGGAG_L001_17236_1 
#>                                       "013"                                       "014" 
#> lane1_3600STDY6167851_ACGCAATC_L001_17236_1 lane1_3600STDY6167852_ACAAGTGC_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167853_ATGGATCC_L001_17236_1 lane1_3600STDY6167854_AGAGGACC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167855_ATCTCCAC_L001_17236_1 lane1_3600STDY6167856_ATTGGCTA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167857_AATCCTGA_L001_17236_1 lane1_3600STDY6167858_AGGATTCA_L001_17236_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6167859_AACTGGCA_L001_17236_1 lane1_3600STDY6167860_ACAACGCA_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167861_CGGAAACA_L001_17236_1 lane1_3600STDY6167862_AATGAATT_L001_17236_1 
#>                                        "02"                                       "014" 
#> lane1_3600STDY6167863_TAGGACCC_L001_17236_1 lane1_3600STDY6167864_TCTCAGTG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167865_CATGGGAA_L001_17236_1 lane1_3600STDY6167866_CCTAAGAT_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167867_CTCAGATA_L001_17236_1 lane1_3600STDY6167868_CCCATAGG_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167869_GCTATGAC_L001_17236_1 lane1_3600STDY6167870_GCTGTGAA_L001_17236_1 
#>                                       "011"                                        "02" 
#> lane1_3600STDY6167871_ACCTTCAA_L001_17236_1 lane1_3600STDY6167872_ACAAAGCC_L001_17236_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6167873_CAAAACCG_L001_17236_1 lane1_3600STDY6167874_GCTGGACA_L001_17236_1 
#>                                        "02"                                       "014" 
#> lane1_3600STDY6167875_AAGTCGTA_L001_17236_1 lane1_3600STDY6167876_CATCCGTA_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167877_TTGTGTCT_L001_17236_1 lane1_3600STDY6167878_TGCTCTAG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167879_ACCCAACA_L001_17236_1 lane1_3600STDY6167880_CGATCTGA_L001_17236_1 
#>                                        "02"                                       "011" 
#> lane1_3600STDY6167881_GTTCCACG_L001_17236_1 lane1_3600STDY6167882_ACTCTTTC_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167883_TATTGGAG_L001_17236_1 lane1_3600STDY6167884_TAAACATA_L001_17236_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6167885_GTAAGATA_L001_17236_1 lane1_3600STDY6167886_TACCGCAA_L001_17236_1 
#>                                        "03"                                       "013" 
#> lane1_3600STDY6167887_TATCTCCT_L001_17236_1 lane1_3600STDY6167888_TGTCATCT_L001_17236_1 
#>                                        "03"                                       "011" 
#> lane1_3600STDY6167889_ATAGCTCT_L001_17236_1 lane1_3600STDY6167890_AGTCCAAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167891_TTTGGGCA_L001_17236_1 lane1_3600STDY6167892_TCTGACGC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167893_TGTCGACT_L001_17236_1 lane1_3600STDY6167894_GTCACGTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167895_TTGAGCGA_L001_17236_1 lane1_3600STDY6167896_GAGACATA_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167897_GTCAAGCT_L001_17236_1 lane1_3600STDY6167898_AGCAAGTT_L001_17236_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6167899_GACGCTCA_L001_17236_1 lane1_3600STDY6167900_ACGGCAGC_L001_17236_1 
#>                                       "011"                                        "03" 
#> lane1_3600STDY6167901_AGAACTGA_L001_17236_1 lane1_3600STDY6167902_CGCCTTTG_L001_17236_1 
#>                                        "03"                                       "011" 
#> lane1_3600STDY6167903_TAAGGTCA_L001_17236_1 lane1_3600STDY6167904_ACGTTGGC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167905_CCAGCTTA_L001_17236_1 lane1_3600STDY6167906_GAATCCTA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167907_ACTTCGTA_L001_17236_1 lane1_3600STDY6167908_TAGTCGGT_L001_17236_1 
#>                                       "013"                                        "02" 
#> lane1_3600STDY6167909_CGCACGAG_L001_17236_1 lane1_3600STDY6167910_ACGTACTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167911_AGCGCCAA_L001_17236_1 lane1_3600STDY6167912_GCCTGCCC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167913_AGGACGAT_L001_17236_1 lane1_3600STDY6167914_CTTGACCG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167915_AGGTCTAA_L001_17236_1 lane1_3600STDY6167916_CGAGATCC_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167917_ATTAGCGG_L001_17236_1 lane1_3600STDY6167918_GCGCTGAT_L001_17236_1 
#>                                       "011"                                        "02" 
#> lane1_3600STDY6167919_TGCTGAAC_L001_17236_1 lane1_3600STDY6167920_GAGGGCAG_L001_17236_1 
#>                                       "014"                                        "02" 
#> lane1_3600STDY6167921_GTTTTCAC_L001_17236_1 lane1_3600STDY6167922_GAGATGCC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167923_TTGAGAAG_L001_17236_1 lane1_3600STDY6167924_GCATCCGG_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167925_GTCACCAG_L001_17236_1 lane1_3600STDY6167926_GAGGTCGC_L001_17236_1 
#>                                       "011"                                        "03" 
#> lane1_3600STDY6167927_AAGGGGTA_L001_17236_1 lane1_3600STDY6167928_TTTTACGT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167929_TTCCTACA_L001_17236_1 lane1_3600STDY6167930_AGTGTAGT_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167931_GTGGCCAA_L001_17236_1 lane1_3600STDY6167932_AAATACTC_L001_17236_1 
#>                                       "013"                                       "014" 
#> lane1_3600STDY6167933_CACCCGTC_L001_17236_1 lane1_3600STDY6167934_TCGTGGTT_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167935_ACTTGGGG_L001_17236_1 lane1_3600STDY6167936_GGCTGCTT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167937_CAGGGTCG_L001_17236_1 lane1_3600STDY6167938_CTCGTCGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167939_TCTACAGT_L001_17236_1 lane1_3600STDY6167940_CTTCTAGA_L001_17236_1 
#>                                       "011"                                        "03" 
#> lane1_3600STDY6167941_AACGGCTT_L001_17236_1 lane1_3600STDY6167942_ATAAGACT_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167943_GTTTTTCG_L001_17236_1 lane1_3600STDY6167944_ATTGGTAT_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167945_CGCCAGTA_L001_17236_1 lane1_3600STDY6167946_AAGCCGAA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167947_TGACCCAC_L001_17236_1 lane1_3600STDY6167948_ATTGCACA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167949_CTTTTGAT_L001_17236_1 lane1_3600STDY6167950_TAGCGAGA_L001_17236_1 
#>                                       "011"                                        "02" 
#> lane1_3600STDY6167951_TTCGCAGG_L001_17236_1 lane1_3600STDY6167952_TAGTTATT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167953_TCCTCCGA_L001_17236_1 lane1_3600STDY6167954_GCGGGTCT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167955_GATTCTAT_L001_17236_1 lane1_3600STDY6167956_ATGCAAAG_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167957_GTCTGAGG_L001_17236_1 lane1_3600STDY6167958_TCTGGCGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167959_AATTTGCG_L001_17236_1 lane1_3600STDY6167960_TGGGTTGG_L001_17236_1 
#>                                       "011"                                        "03" 
#> lane1_3600STDY6167961_AGTTGAAA_L001_17236_1 lane1_3600STDY6167962_GACCGGAA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167963_GATCGAAC_L001_17236_1 lane1_3600STDY6167964_GTATAGGG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167965_GGTAAGAG_L001_17236_1 lane1_3600STDY6167966_AGTCCGAT_L001_17236_1 
#>                                        "02"                                       "011" 
#> lane1_3600STDY6167967_ATACAGGC_L001_17236_1 lane1_3600STDY6167968_TGAGACTC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167969_ACTCAGGA_L001_17236_1 lane1_3600STDY6167970_GTGTCTGA_L001_17236_1 
#>                                       "011"                                        "03" 
#> lane1_3600STDY6167971_CTTGAATC_L001_17236_1 lane1_3600STDY6167972_CCGCATGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167973_AAGTAACA_L001_17236_1 lane1_3600STDY6167974_GTGGTACT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167975_AGCTGTGC_L001_17236_1 lane1_3600STDY6167976_TTACCTTC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167977_TCCGGGTA_L001_17236_1 lane1_3600STDY6167978_CTACGTAA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167979_TCGGACCG_L001_17236_1 lane1_3600STDY6167980_ATGCGTCG_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167981_TTCTTAGC_L001_17236_1 lane1_3600STDY6167982_TGAGTAAG_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167983_AAGTGATA_L001_17236_1 lane1_3600STDY6167984_TCGATGCG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167985_TATTCTGG_L001_17236_1 lane1_3600STDY6167986_AGCCGTGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167987_AAGCCTTC_L001_17236_1 lane1_3600STDY6167988_AGGTATCC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167989_AGGATCTC_L001_17236_1 lane1_3600STDY6167990_CTGTTTGA_L001_17236_1 
#>                                        "02"                                       "011" 
#> lane1_3600STDY6167991_GGAATTTC_L001_17236_1 lane1_3600STDY6167992_TTGGAGCA_L001_17236_1 
#>                                       "013"                                        "03" 
#> lane1_3600STDY6167993_AAGGTCTG_L001_17236_1 lane1_3600STDY6167994_AATTAGGC_L001_17236_1 
#>                                        "03"                                       "011" 
#> lane1_3600STDY6167995_AATCGGGT_L001_17236_1 lane1_3600STDY6167996_AGGTAGAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167997_CTTATTCC_L001_17236_1 lane1_3600STDY6167998_CAGGCTCT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167999_AAAGCACG_L001_17236_1 lane1_3600STDY6168000_GTATACAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168001_GGACATAT_L001_17236_1 lane1_3600STDY6168002_CGGTTGGG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168003_GTCCGTGA_L001_17236_1 lane1_3600STDY6168004_GCCGAACC_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6168005_ACTTTACT_L001_17236_1 lane1_3600STDY6168006_GGGTCCAT_L001_17236_1 
#>                                        "03"                                       "013" 
#> lane1_3600STDY6168007_ATAACTAG_L001_17236_1 lane1_3600STDY6168008_AATAGAGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168009_TCACCATT_L001_17236_1 lane1_3600STDY6168010_CGCCTGAT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168011_GCGTGAAC_L001_17236_1 lane1_3600STDY6168012_TAAGGGTG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168013_GGTGTCGA_L001_17236_1 lane1_3600STDY6168014_CCGTTAGG_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6168015_TGGCAAAA_L001_17236_1 lane1_3600STDY6168016_CCTACCCG_L001_17236_1 
#>                                       "011"                                        "02" 
#> lane1_3600STDY6168017_AACAGCGC_L001_17236_1 lane1_3600STDY6168018_TATACATC_L001_17236_1 
#>                                       "013"                                        "02" 
#> lane1_3600STDY6168019_AAGCGACT_L001_17236_1 lane1_3600STDY6168020_GAAGCGCA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168021_ACCTCTAC_L001_17236_1 lane1_3600STDY6168022_GATTGCGT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168023_GCTGGTTG_L001_17236_1 lane1_3600STDY6168024_ATCGTCCT_L001_17236_1 
#>                                        "02"                                       "011" 
#> lane1_3600STDY6168025_GGACACGG_L001_17236_1 lane1_3600STDY6168026_CGCACCTA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168027_CTTCGGCT_L001_17236_1 lane1_3600STDY6168028_CGAATCGA_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6168029_TAACAACT_L001_17236_1 lane1_3600STDY6168030_AGCTCTTT_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168031_TAATCCCT_L001_17236_1 lane1_3600STDY6168032_AGGACACT_L001_17236_1 
#>                                       "011"                                        "03" 
#> lane1_3600STDY6168033_TTACACTA_L001_17236_1 lane1_3600STDY6168034_AAACATCA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168035_CCATAGCT_L001_17236_1 lane1_3600STDY6168036_GTTATGGC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168037_ATCCCCTA_L001_17236_1 lane1_3600STDY6168038_CATACTAC_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6168039_CAATTGTT_L001_17236_1 lane1_3600STDY6168040_AAACCCGT_L001_17236_1 
#>                                       "014"                                        "02" 
#> lane1_3600STDY6168041_CAGATTTC_L001_17236_1 lane1_3600STDY6168042_GCGTAGGT_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6168043_GGCATTCG_L001_17236_1 lane1_3600STDY6168044_TGGGGCTT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168045_CTGACTAC_L001_17236_1 lane1_3600STDY6168046_AACTTTTA_L001_17236_1 
#>                                       "011"                                        "03" 
#> lane1_3600STDY6168047_AGGGATTC_L001_17236_1 lane1_3600STDY6168048_CCGAGTAG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168049_GGGGACTA_L001_17236_1 lane1_3600STDY6168050_GGAGTTGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168051_AGCTCATC_L001_17236_1 lane1_3600STDY6168052_TAATCAAC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168053_ACTGGTCG_L001_17236_1 lane1_3600STDY6168054_GACGATTG_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168055_AGCGATGA_L001_17236_1 lane1_3600STDY6168056_GAAGAGAT_L001_17236_1 
#>                                       "011"                                        "03" 
#> lane1_3600STDY6168057_CGTATGCA_L001_17236_1 lane1_3600STDY6168058_CACGTGCG_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6168059_GCTTAAAC_L001_17236_1 lane1_3600STDY6168060_GTTCCGCA_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6168061_GTATCGTC_L001_17236_1 lane1_3600STDY6168062_GTCCTCAC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168063_GTACGGAC_L001_17236_1 lane1_3600STDY6168064_CATTTTGC_L001_17236_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6168065_TCCTCTCT_L001_17236_1 lane1_3600STDY6168066_AGCAACGA_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6168067_ACAGAAGA_L001_17236_1 lane1_3600STDY6168068_CGACCCTT_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6168069_CTGCCTAG_L001_17236_1 lane1_3600STDY6168070_GAGCGCAT_L001_17236_1 
#>                                        "02"                                       "013" 
#> lane1_3600STDY6168071_AACTTATC_L001_17236_1 lane1_3600STDY6168072_CCGATGTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168073_TTACTACC_L001_17236_1 lane1_3600STDY6168074_CAAGGAGC_L001_17236_1 
#>                                       "013"                                       "014" 
#> lane1_3600STDY6168075_TGGTTGAC_L001_17236_1 lane1_3600STDY6168076_ACCTGCTG_L001_17236_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184181_ATCACGTT_L004_17480_1 lane4_3600STDY6184182_CGATGTTT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184183_TTAGGCAT_L004_17480_1 lane4_3600STDY6184184_TGACCACT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184185_ACAGTGGT_L004_17480_1 lane4_3600STDY6184186_GCCAATGT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184187_CAGATCTG_L004_17480_1 lane4_3600STDY6184188_ACTTGATG_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184189_GATCAGCG_L004_17480_1 lane4_3600STDY6184190_TAGCTTGT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184191_GGCTACAG_L004_17480_1 lane4_3600STDY6184192_CTTGTACT_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184193_TGGTTGTT_L004_17480_1 lane4_3600STDY6184194_TCTCGGTT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184195_TAAGCGTT_L004_17480_1 lane4_3600STDY6184196_TCCGTCTT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184197_TGTACCTT_L004_17480_1 lane4_3600STDY6184198_TTCTGTGT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184199_TCTGCTGT_L004_17480_1 lane4_3600STDY6184200_TTGGAGGT_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184201_TCGAGCGT_L004_17480_1 lane4_3600STDY6184202_TGATACGT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184203_TGCATAGT_L004_17480_1 lane4_3600STDY6184204_TTGACTCT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184205_TGCGATCT_L004_17480_1 lane4_3600STDY6184206_TTCCTGCT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184207_TAGTGACT_L004_17480_1 lane4_3600STDY6184208_TACAGGAT_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184209_TCCTCAAT_L004_17480_1 lane4_3600STDY6184210_TGTGGTTG_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184211_TAGTCTTG_L004_17480_1 lane4_3600STDY6184212_TTCCATTG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184213_TCGAAGTG_L004_17480_1 lane4_3600STDY6184214_TAACGCTG_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184215_TTGGTATG_L004_17480_1 lane4_3600STDY6184216_TGAACTGG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184217_TACTTCGG_L004_17480_1 lane4_3600STDY6184218_TCTCACGG_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184219_TCAGGAGG_L004_17480_1 lane4_3600STDY6184220_TAAGTTCG_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184221_TCCAGTCG_L004_17480_1 lane4_3600STDY6184222_TGTATGCG_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184223_TCATTGAG_L004_17480_1 lane4_3600STDY6184224_TGGCTCAG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184225_TATGCCAG_L004_17480_1 lane4_3600STDY6184226_TCAGATTC_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184227_TACTAGTC_L004_17480_1 lane4_3600STDY6184228_TTCAGCTC_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184229_TGTCTATC_L004_17480_1 lane4_3600STDY6184230_TATGTGGC_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184231_TTACTCGC_L004_17480_1 lane4_3600STDY6184232_TCGTTAGC_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184233_TACCGAGC_L004_17480_1 lane4_3600STDY6184234_TGTTCTCC_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184235_TTCGCACC_L004_17480_1 lane4_3600STDY6184236_TTGCGTAC_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184237_TCTACGAC_L004_17480_1 lane4_3600STDY6184238_TGACAGAC_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184239_TAGAACAC_L004_17480_1 lane4_3600STDY6184240_TCATCCTA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184241_TGCTGATA_L004_17480_1 lane4_3600STDY6184242_TAGACGGA_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184243_TGTGAAGA_L004_17480_1 lane4_3600STDY6184244_TCTCTTCA_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184245_TTGTTCCA_L004_17480_1 lane4_3600STDY6184246_TGAAGCCA_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184247_TACCACCA_L004_17480_1 lane4_3600STDY6184248_TGCGTGAA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184249_GGTGAGTT_L004_17480_1 lane4_3600STDY6184250_GATCTCTT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184251_GTGTCCTT_L004_17480_1 lane4_3600STDY6184252_GACGGATT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184253_GCAACATT_L004_17480_1 lane4_3600STDY6184254_GGTCGTGT_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184255_GAATCTGT_L004_17480_1 lane4_3600STDY6184256_GTACATCT_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184257_GAGGTGCT_L004_17480_1 lane4_3600STDY6184258_GCATGGCT_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184259_GTTAGCCT_L004_17480_1 lane4_3600STDY6184260_GTCGCTAT_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184261_GGAATGAT_L004_17480_1 lane4_3600STDY6184262_GAGCCAAT_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184263_GCTCCTTG_L004_17480_1 lane4_3600STDY6184264_GTAAGGTG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184265_GAGGATGG_L004_17480_1 lane4_3600STDY6184266_GTTGTCGG_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184267_GGATTAGG_L004_17480_1 lane4_3600STDY6184268_GATAGAGG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184269_GTGTGTCG_L004_17480_1 lane4_3600STDY6184270_GCAATCCG_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184271_GACCTTAG_L004_17480_1 lane4_3600STDY6184272_GCCTGTTC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184273_GCACTGTC_L004_17480_1 lane4_3600STDY6184274_GCTAACTC_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184275_GATTCATC_L004_17480_1 lane4_3600STDY6184276_GTCTTGGC_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184277_GTAGAAGC_L004_17480_1 lane4_3600STDY6184278_GATGGTCC_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184279_GTGCTACC_L004_17480_1 lane4_3600STDY6184280_GCGATTAC_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184281_GGTTGGAC_L004_17480_1 lane4_3600STDY6184282_GGCACAAC_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184283_GACACTTA_L004_17480_1 lane4_3600STDY6184284_GTGCAGTA_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184285_GGAGTCTA_L004_17480_1 lane4_3600STDY6184286_GCTATGGA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184287_GAGTGCGA_L004_17480_1 lane4_3600STDY6184288_GTAACCGA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184289_GGCAAGCA_L004_17480_1 lane4_3600STDY6184290_GCCTTACA_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184291_GAACGACA_L004_17480_1 lane4_3600STDY6184292_GCAGGTAA_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184293_GCGTCGAA_L004_17480_1 lane4_3600STDY6184294_CGTTCGGT_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184295_CACCAGGT_L004_17480_1 lane4_3600STDY6184296_CTGCGAGT_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184297_CCGTATCT_L004_17480_1 lane4_3600STDY6184298_CGCTTCCT_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184299_CAAGACCT_L004_17480_1 lane4_3600STDY6184300_CACACACT_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184301_CCTAGTAT_L004_17480_1 lane4_3600STDY6184302_CCACCGAT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184303_CTTCACAT_L004_17480_1 lane4_3600STDY6184304_CTATCATG_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184305_CATGAATG_L004_17480_1 lane4_3600STDY6184306_CCACTTGG_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184307_CTGTACGG_L004_17480_1 lane4_3600STDY6184308_CTAGATAG_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184309_CACTCGAG_L004_17480_1 lane4_3600STDY6184310_CCGACAAG_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184311_CTTGCTTC_L004_17480_1 lane4_3600STDY6184312_CATAGGTC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184313_CACATTGC_L004_17480_1 lane4_3600STDY6184314_CGCTAAGC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184315_CAACCTCC_L004_17480_1 lane4_3600STDY6184316_CAGCTGAC_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184317_CTCAAGAC_L004_17480_1 lane4_3600STDY6184318_CGTGTCAC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184319_CCATGCAC_L004_17480_1 lane4_3600STDY6184320_CGTTACTA_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184321_CAAGTAGA_L004_17480_1 lane4_3600STDY6184322_CTCTCTCA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184323_CGACTGCA_L004_17480_1 lane4_3600STDY6184324_CCTGAGCA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184325_CAGGCTAA_L004_17480_1 lane4_3600STDY6184326_CGGAGGAA_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184327_AGGAGATT_L004_17480_1 lane4_3600STDY6184328_AGGCAGCT_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184329_ACGTTCAT_L004_17480_1 lane4_3600STDY6184330_AACGTGTG_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184331_AGACCGTG_L004_17480_1 lane4_3600STDY6184332_ACCTCTGG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184333_ATCCTAGG_L004_17480_1 lane4_3600STDY6184334_ATCAACCG_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184335_AGGTCACG_L004_17480_1 lane4_3600STDY6184336_ACTGTTAG_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184337_AAGAGTAG_L004_17480_1 lane4_3600STDY6184338_ATTCGGAG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184339_ACGCAATC_L004_17480_1 lane4_3600STDY6184340_ACAAGTGC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184341_ATGGATCC_L004_17480_1 lane4_3600STDY6184342_AGAGGACC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184343_ATCTCCAC_L004_17480_1 lane4_3600STDY6184344_ATTGGCTA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184345_AATCCTGA_L004_17480_1 lane4_3600STDY6184346_AGGATTCA_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184347_AACTGGCA_L004_17480_1 lane4_3600STDY6184348_ACAACGCA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184349_CGGAAACA_L004_17480_1 lane4_3600STDY6184350_AATGAATT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184351_TAGGACCC_L004_17480_1 lane4_3600STDY6184352_TCTCAGTG_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184353_CATGGGAA_L004_17480_1 lane4_3600STDY6184354_CCTAAGAT_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184355_CTCAGATA_L004_17480_1 lane4_3600STDY6184356_CCCATAGG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184357_GCTATGAC_L004_17480_1 lane4_3600STDY6184358_GCTGTGAA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184359_ACCTTCAA_L004_17480_1 lane4_3600STDY6184360_ACAAAGCC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184361_CAAAACCG_L004_17480_1 lane4_3600STDY6184362_GCTGGACA_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184363_AAGTCGTA_L004_17480_1 lane4_3600STDY6184364_CATCCGTA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184365_TTGTGTCT_L004_17480_1 lane4_3600STDY6184366_TGCTCTAG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184367_ACCCAACA_L004_17480_1 lane4_3600STDY6184368_CGATCTGA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184369_GTTCCACG_L004_17480_1 lane4_3600STDY6184370_ACTCTTTC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184371_TATTGGAG_L004_17480_1 lane4_3600STDY6184372_TAAACATA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184373_GTAAGATA_L004_17480_1 lane4_3600STDY6184374_TACCGCAA_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184375_TATCTCCT_L004_17480_1 lane4_3600STDY6184376_TGTCATCT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184377_ATAGCTCT_L004_17480_1 lane4_3600STDY6184378_AGTCCAAC_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184379_TTTGGGCA_L004_17480_1 lane4_3600STDY6184380_TCTGACGC_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184381_TGTCGACT_L004_17480_1 lane4_3600STDY6184382_GTCACGTA_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184383_TTGAGCGA_L004_17480_1 lane4_3600STDY6184384_GAGACATA_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184385_GTCAAGCT_L004_17480_1 lane4_3600STDY6184386_AGCAAGTT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184387_GACGCTCA_L004_17480_1 lane4_3600STDY6184388_ACGGCAGC_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184389_AGAACTGA_L004_17480_1 lane4_3600STDY6184390_CGCCTTTG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184391_TAAGGTCA_L004_17480_1 lane4_3600STDY6184392_ACGTTGGC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184393_CCAGCTTA_L004_17480_1 lane4_3600STDY6184394_GAATCCTA_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184395_ACTTCGTA_L004_17480_1 lane4_3600STDY6184396_TAGTCGGT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184397_CGCACGAG_L004_17480_1 lane4_3600STDY6184398_ACGTACTA_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184399_AGCGCCAA_L004_17480_1 lane4_3600STDY6184400_GCCTGCCC_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184401_AGGACGAT_L004_17480_1 lane4_3600STDY6184402_CTTGACCG_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184403_AGGTCTAA_L004_17480_1 lane4_3600STDY6184404_CGAGATCC_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184405_ATTAGCGG_L004_17480_1 lane4_3600STDY6184406_GCGCTGAT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184407_TGCTGAAC_L004_17480_1 lane4_3600STDY6184408_GAGGGCAG_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184409_GTTTTCAC_L004_17480_1 lane4_3600STDY6184410_GAGATGCC_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184411_TTGAGAAG_L004_17480_1 lane4_3600STDY6184412_GCATCCGG_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184413_GTCACCAG_L004_17480_1 lane4_3600STDY6184414_GAGGTCGC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184415_AAGGGGTA_L004_17480_1 lane4_3600STDY6184416_TTTTACGT_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184417_TTCCTACA_L004_17480_1 lane4_3600STDY6184418_AGTGTAGT_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184419_GTGGCCAA_L004_17480_1 lane4_3600STDY6184420_AAATACTC_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184421_CACCCGTC_L004_17480_1 lane4_3600STDY6184422_TCGTGGTT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184423_ACTTGGGG_L004_17480_1 lane4_3600STDY6184424_GGCTGCTT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184425_CAGGGTCG_L004_17480_1 lane4_3600STDY6184426_CTCGTCGA_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184427_TCTACAGT_L004_17480_1 lane4_3600STDY6184428_CTTCTAGA_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184429_AACGGCTT_L004_17480_1 lane4_3600STDY6184430_ATAAGACT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184431_GTTTTTCG_L004_17480_1 lane4_3600STDY6184432_ATTGGTAT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184433_CGCCAGTA_L004_17480_1 lane4_3600STDY6184434_AAGCCGAA_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184435_TGACCCAC_L004_17480_1 lane4_3600STDY6184436_ATTGCACA_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184437_CTTTTGAT_L004_17480_1 lane4_3600STDY6184438_TAGCGAGA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184439_TTCGCAGG_L004_17480_1 lane4_3600STDY6184440_TAGTTATT_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184441_TCCTCCGA_L004_17480_1 lane4_3600STDY6184442_GCGGGTCT_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184443_GATTCTAT_L004_17480_1 lane4_3600STDY6184444_ATGCAAAG_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184445_GTCTGAGG_L004_17480_1 lane4_3600STDY6184446_TCTGGCGA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184447_AATTTGCG_L004_17480_1 lane4_3600STDY6184448_TGGGTTGG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184449_AGTTGAAA_L004_17480_1 lane4_3600STDY6184450_GACCGGAA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184451_GATCGAAC_L004_17480_1 lane4_3600STDY6184452_GTATAGGG_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184453_GGTAAGAG_L004_17480_1 lane4_3600STDY6184454_AGTCCGAT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184455_ATACAGGC_L004_17480_1 lane4_3600STDY6184456_TGAGACTC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184457_ACTCAGGA_L004_17480_1 lane4_3600STDY6184458_GTGTCTGA_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184459_CTTGAATC_L004_17480_1 lane4_3600STDY6184460_CCGCATGA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184461_AAGTAACA_L004_17480_1 lane4_3600STDY6184462_GTGGTACT_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184463_AGCTGTGC_L004_17480_1 lane4_3600STDY6184464_TTACCTTC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184465_TCCGGGTA_L004_17480_1 lane4_3600STDY6184466_CTACGTAA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184467_TCGGACCG_L004_17480_1 lane4_3600STDY6184468_ATGCGTCG_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184469_TTCTTAGC_L004_17480_1 lane4_3600STDY6184470_TGAGTAAG_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184471_AAGTGATA_L004_17480_1 lane4_3600STDY6184472_TCGATGCG_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184473_TATTCTGG_L004_17480_1 lane4_3600STDY6184474_AGCCGTGA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184475_AAGCCTTC_L004_17480_1 lane4_3600STDY6184476_AGGTATCC_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184477_AGGATCTC_L004_17480_1 lane4_3600STDY6184478_CTGTTTGA_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184479_GGAATTTC_L004_17480_1 lane4_3600STDY6184480_TTGGAGCA_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184481_AAGGTCTG_L004_17480_1 lane4_3600STDY6184482_AATTAGGC_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184483_AATCGGGT_L004_17480_1 lane4_3600STDY6184484_AGGTAGAC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184485_CTTATTCC_L004_17480_1 lane4_3600STDY6184486_CAGGCTCT_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184487_AAAGCACG_L004_17480_1 lane4_3600STDY6184488_GTATACAC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184489_GGACATAT_L004_17480_1 lane4_3600STDY6184490_CGGTTGGG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184491_GTCCGTGA_L004_17480_1 lane4_3600STDY6184492_GCCGAACC_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184493_ACTTTACT_L004_17480_1 lane4_3600STDY6184494_GGGTCCAT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184495_ATAACTAG_L004_17480_1 lane4_3600STDY6184496_AATAGAGA_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184497_TCACCATT_L004_17480_1 lane4_3600STDY6184498_CGCCTGAT_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184499_GCGTGAAC_L004_17480_1 lane4_3600STDY6184500_TAAGGGTG_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184501_GGTGTCGA_L004_17480_1 lane4_3600STDY6184502_CCGTTAGG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184503_TGGCAAAA_L004_17480_1 lane4_3600STDY6184504_CCTACCCG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184505_AACAGCGC_L004_17480_1 lane4_3600STDY6184506_TATACATC_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184507_AAGCGACT_L004_17480_1 lane4_3600STDY6184508_GAAGCGCA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184509_ACCTCTAC_L004_17480_1 lane4_3600STDY6184510_GATTGCGT_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184511_GCTGGTTG_L004_17480_1 lane4_3600STDY6184512_ATCGTCCT_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184513_GGACACGG_L004_17480_1 lane4_3600STDY6184514_CGCACCTA_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184515_CTTCGGCT_L004_17480_1 lane4_3600STDY6184516_CGAATCGA_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184517_TAACAACT_L004_17480_1 lane4_3600STDY6184518_AGCTCTTT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184519_TAATCCCT_L004_17480_1 lane4_3600STDY6184520_AGGACACT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184521_TTACACTA_L004_17480_1 lane4_3600STDY6184522_AAACATCA_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184523_CCATAGCT_L004_17480_1 lane4_3600STDY6184524_GTTATGGC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184525_ATCCCCTA_L004_17480_1 lane4_3600STDY6184526_CATACTAC_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184527_CAATTGTT_L004_17480_1 lane4_3600STDY6184528_AAACCCGT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184529_CAGATTTC_L004_17480_1 lane4_3600STDY6184530_GCGTAGGT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184531_GGCATTCG_L004_17480_1 lane4_3600STDY6184532_TGGGGCTT_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184533_CTGACTAC_L004_17480_1 lane4_3600STDY6184534_AACTTTTA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184535_AGGGATTC_L004_17480_1 lane4_3600STDY6184536_CCGAGTAG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184537_GGGGACTA_L004_17480_1 lane4_3600STDY6184538_GGAGTTGA_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184539_AGCTCATC_L004_17480_1 lane4_3600STDY6184540_TAATCAAC_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184541_ACTGGTCG_L004_17480_1 lane4_3600STDY6184542_GACGATTG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184543_AGCGATGA_L004_17480_1 lane4_3600STDY6184544_GAAGAGAT_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184545_CGTATGCA_L004_17480_1 lane4_3600STDY6184546_CACGTGCG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184547_GCTTAAAC_L004_17480_1 lane4_3600STDY6184548_GTTCCGCA_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184549_GTATCGTC_L004_17480_1 lane4_3600STDY6184550_GTCCTCAC_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184551_GTACGGAC_L004_17480_1 lane4_3600STDY6184552_CATTTTGC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184553_TCCTCTCT_L004_17480_1 lane4_3600STDY6184554_AGCAACGA_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184555_ACAGAAGA_L004_17480_1 lane4_3600STDY6184556_CGACCCTT_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184557_CTGCCTAG_L004_17480_1 lane4_3600STDY6184558_GAGCGCAT_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184559_AACTTATC_L004_17480_1 lane4_3600STDY6184560_CCGATGTA_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184561_TTACTACC_L004_17480_1 lane4_3600STDY6184562_CAAGGAGC_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184563_TGGTTGAC_L004_17480_1 lane4_3600STDY6184564_ACCTGCTG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183797_ATCACGTT_L001_17592_1 lane1_3600STDY6183798_CGATGTTT_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6183799_TTAGGCAT_L001_17592_1 lane1_3600STDY6183800_TGACCACT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183801_ACAGTGGT_L001_17592_1 lane1_3600STDY6183802_GCCAATGT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183803_CAGATCTG_L001_17592_1 lane1_3600STDY6183804_ACTTGATG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183805_GATCAGCG_L001_17592_1 lane1_3600STDY6183806_TAGCTTGT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183807_GGCTACAG_L001_17592_1 lane1_3600STDY6183808_CTTGTACT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183809_TGGTTGTT_L001_17592_1 lane1_3600STDY6183810_TCTCGGTT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183811_TAAGCGTT_L001_17592_1 lane1_3600STDY6183812_TCCGTCTT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183813_TGTACCTT_L001_17592_1 lane1_3600STDY6183814_TTCTGTGT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183815_TCTGCTGT_L001_17592_1 lane1_3600STDY6183816_TTGGAGGT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183817_TCGAGCGT_L001_17592_1 lane1_3600STDY6183818_TGATACGT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183819_TGCATAGT_L001_17592_1 lane1_3600STDY6183820_TTGACTCT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183821_TGCGATCT_L001_17592_1 lane1_3600STDY6183822_TTCCTGCT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183823_TAGTGACT_L001_17592_1 lane1_3600STDY6183824_TACAGGAT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183825_TCCTCAAT_L001_17592_1 lane1_3600STDY6183826_TGTGGTTG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183827_TAGTCTTG_L001_17592_1 lane1_3600STDY6183828_TTCCATTG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183829_TCGAAGTG_L001_17592_1 lane1_3600STDY6183830_TAACGCTG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183831_TTGGTATG_L001_17592_1 lane1_3600STDY6183832_TGAACTGG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183833_TACTTCGG_L001_17592_1 lane1_3600STDY6183834_TCTCACGG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183835_TCAGGAGG_L001_17592_1 lane1_3600STDY6183836_TAAGTTCG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183837_TCCAGTCG_L001_17592_1 lane1_3600STDY6183838_TGTATGCG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183839_TCATTGAG_L001_17592_1 lane1_3600STDY6183840_TGGCTCAG_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6183841_TATGCCAG_L001_17592_1 lane1_3600STDY6183842_TCAGATTC_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6183843_TACTAGTC_L001_17592_1 lane1_3600STDY6183844_TTCAGCTC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183845_TGTCTATC_L001_17592_1 lane1_3600STDY6183846_TATGTGGC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183847_TTACTCGC_L001_17592_1 lane1_3600STDY6183848_TCGTTAGC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183849_TACCGAGC_L001_17592_1 lane1_3600STDY6183850_TGTTCTCC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183851_TTCGCACC_L001_17592_1 lane1_3600STDY6183852_TTGCGTAC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183853_TCTACGAC_L001_17592_1 lane1_3600STDY6183854_TGACAGAC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183855_TAGAACAC_L001_17592_1 lane1_3600STDY6183856_TCATCCTA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183857_TGCTGATA_L001_17592_1 lane1_3600STDY6183858_TAGACGGA_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6183859_TGTGAAGA_L001_17592_1 lane1_3600STDY6183860_TCTCTTCA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183861_TTGTTCCA_L001_17592_1 lane1_3600STDY6183862_TGAAGCCA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183863_TACCACCA_L001_17592_1 lane1_3600STDY6183864_TGCGTGAA_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183865_GGTGAGTT_L001_17592_1 lane1_3600STDY6183866_GATCTCTT_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6183867_GTGTCCTT_L001_17592_1 lane1_3600STDY6183868_GACGGATT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183869_GCAACATT_L001_17592_1 lane1_3600STDY6183870_GGTCGTGT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183871_GAATCTGT_L001_17592_1 lane1_3600STDY6183872_GTACATCT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183873_GAGGTGCT_L001_17592_1 lane1_3600STDY6183874_GCATGGCT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183875_GTTAGCCT_L001_17592_1 lane1_3600STDY6183876_GTCGCTAT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183877_GGAATGAT_L001_17592_1 lane1_3600STDY6183878_GAGCCAAT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183879_GCTCCTTG_L001_17592_1 lane1_3600STDY6183880_GTAAGGTG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183881_GAGGATGG_L001_17592_1 lane1_3600STDY6183882_GTTGTCGG_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183883_GGATTAGG_L001_17592_1 lane1_3600STDY6183884_GATAGAGG_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183885_GTGTGTCG_L001_17592_1 lane1_3600STDY6183886_GCAATCCG_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183887_GACCTTAG_L001_17592_1 lane1_3600STDY6183888_GCCTGTTC_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183889_GCACTGTC_L001_17592_1 lane1_3600STDY6183890_GCTAACTC_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6183891_GATTCATC_L001_17592_1 lane1_3600STDY6183892_GTCTTGGC_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6183893_GTAGAAGC_L001_17592_1 lane1_3600STDY6183894_GATGGTCC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183895_GTGCTACC_L001_17592_1 lane1_3600STDY6183896_GCGATTAC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183897_GGTTGGAC_L001_17592_1 lane1_3600STDY6183898_GGCACAAC_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183899_GACACTTA_L001_17592_1 lane1_3600STDY6183900_GTGCAGTA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183901_GGAGTCTA_L001_17592_1 lane1_3600STDY6183902_GCTATGGA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183903_GAGTGCGA_L001_17592_1 lane1_3600STDY6183904_GTAACCGA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183905_GGCAAGCA_L001_17592_1 lane1_3600STDY6183906_GCCTTACA_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6183907_GAACGACA_L001_17592_1 lane1_3600STDY6183908_GCAGGTAA_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183909_GCGTCGAA_L001_17592_1 lane1_3600STDY6183910_CGTTCGGT_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183911_CACCAGGT_L001_17592_1 lane1_3600STDY6183912_CTGCGAGT_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183913_CCGTATCT_L001_17592_1 lane1_3600STDY6183914_CGCTTCCT_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183915_CAAGACCT_L001_17592_1 lane1_3600STDY6183916_CACACACT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183917_CCTAGTAT_L001_17592_1 lane1_3600STDY6183918_CCACCGAT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183919_CTTCACAT_L001_17592_1 lane1_3600STDY6183920_CTATCATG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183921_CATGAATG_L001_17592_1 lane1_3600STDY6183922_CCACTTGG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183923_CTGTACGG_L001_17592_1 lane1_3600STDY6183924_CTAGATAG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183925_CACTCGAG_L001_17592_1 lane1_3600STDY6183926_CCGACAAG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183927_CTTGCTTC_L001_17592_1 lane1_3600STDY6183928_CATAGGTC_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183929_CACATTGC_L001_17592_1 lane1_3600STDY6183930_CGCTAAGC_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6183931_CAACCTCC_L001_17592_1 lane1_3600STDY6183932_CAGCTGAC_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183933_CTCAAGAC_L001_17592_1 lane1_3600STDY6183934_CGTGTCAC_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183935_CCATGCAC_L001_17592_1 lane1_3600STDY6183936_CGTTACTA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183937_CAAGTAGA_L001_17592_1 lane1_3600STDY6183938_CTCTCTCA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183939_CGACTGCA_L001_17592_1 lane1_3600STDY6183940_CCTGAGCA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183941_CAGGCTAA_L001_17592_1 lane1_3600STDY6183942_CGGAGGAA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183943_AGGAGATT_L001_17592_1 lane1_3600STDY6183944_AGGCAGCT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183945_ACGTTCAT_L001_17592_1 lane1_3600STDY6183946_AACGTGTG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183947_AGACCGTG_L001_17592_1 lane1_3600STDY6183948_ACCTCTGG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183949_ATCCTAGG_L001_17592_1 lane1_3600STDY6183950_ATCAACCG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183951_AGGTCACG_L001_17592_1 lane1_3600STDY6183952_ACTGTTAG_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183953_AAGAGTAG_L001_17592_1 lane1_3600STDY6183954_ATTCGGAG_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6183955_ACGCAATC_L001_17592_1 lane1_3600STDY6183956_ACAAGTGC_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183957_ATGGATCC_L001_17592_1 lane1_3600STDY6183958_AGAGGACC_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183959_ATCTCCAC_L001_17592_1 lane1_3600STDY6183960_ATTGGCTA_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183961_AATCCTGA_L001_17592_1 lane1_3600STDY6183962_AGGATTCA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183963_AACTGGCA_L001_17592_1 lane1_3600STDY6183964_ACAACGCA_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183965_CGGAAACA_L001_17592_1 lane1_3600STDY6183966_AATGAATT_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6183967_TAGGACCC_L001_17592_1 lane1_3600STDY6183968_TCTCAGTG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183969_CATGGGAA_L001_17592_1 lane1_3600STDY6183970_CCTAAGAT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183971_CTCAGATA_L001_17592_1 lane1_3600STDY6183972_CCCATAGG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183973_GCTATGAC_L001_17592_1 lane1_3600STDY6183974_GCTGTGAA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183975_ACCTTCAA_L001_17592_1 lane1_3600STDY6183976_ACAAAGCC_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183977_CAAAACCG_L001_17592_1 lane1_3600STDY6183978_GCTGGACA_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183979_AAGTCGTA_L001_17592_1 lane1_3600STDY6183980_CATCCGTA_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183981_TTGTGTCT_L001_17592_1 lane1_3600STDY6183982_TGCTCTAG_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183983_ACCCAACA_L001_17592_1 lane1_3600STDY6183984_CGATCTGA_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183985_GTTCCACG_L001_17592_1 lane1_3600STDY6183986_ACTCTTTC_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183987_TATTGGAG_L001_17592_1 lane1_3600STDY6183988_TAAACATA_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183989_GTAAGATA_L001_17592_1 lane1_3600STDY6183990_TACCGCAA_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6183991_TATCTCCT_L001_17592_1 lane1_3600STDY6183992_TGTCATCT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183993_ATAGCTCT_L001_17592_1 lane1_3600STDY6183994_AGTCCAAC_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183995_TTTGGGCA_L001_17592_1 lane1_3600STDY6183996_TCTGACGC_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183997_TGTCGACT_L001_17592_1 lane1_3600STDY6183998_GTCACGTA_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183999_TTGAGCGA_L001_17592_1 lane1_3600STDY6184000_GAGACATA_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6184001_GTCAAGCT_L001_17592_1 lane1_3600STDY6184002_AGCAAGTT_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6184003_GACGCTCA_L001_17592_1 lane1_3600STDY6184004_ACGGCAGC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184005_AGAACTGA_L001_17592_1 lane1_3600STDY6184006_CGCCTTTG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184007_TAAGGTCA_L001_17592_1 lane1_3600STDY6184008_ACGTTGGC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184009_CCAGCTTA_L001_17592_1 lane1_3600STDY6184010_GAATCCTA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184011_ACTTCGTA_L001_17592_1 lane1_3600STDY6184012_TAGTCGGT_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6184013_CGCACGAG_L001_17592_1 lane1_3600STDY6184014_ACGTACTA_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184015_AGCGCCAA_L001_17592_1 lane1_3600STDY6184016_GCCTGCCC_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184017_AGGACGAT_L001_17592_1 lane1_3600STDY6184018_CTTGACCG_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184019_AGGTCTAA_L001_17592_1 lane1_3600STDY6184020_CGAGATCC_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184021_ATTAGCGG_L001_17592_1 lane1_3600STDY6184022_GCGCTGAT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184023_TGCTGAAC_L001_17592_1 lane1_3600STDY6184024_GAGGGCAG_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6184025_GTTTTCAC_L001_17592_1 lane1_3600STDY6184026_GAGATGCC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184027_TTGAGAAG_L001_17592_1 lane1_3600STDY6184028_GCATCCGG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184029_GTCACCAG_L001_17592_1 lane1_3600STDY6184030_GAGGTCGC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184031_AAGGGGTA_L001_17592_1 lane1_3600STDY6184032_TTTTACGT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184033_TTCCTACA_L001_17592_1 lane1_3600STDY6184034_AGTGTAGT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184035_GTGGCCAA_L001_17592_1 lane1_3600STDY6184036_AAATACTC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184037_CACCCGTC_L001_17592_1 lane1_3600STDY6184038_TCGTGGTT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184039_ACTTGGGG_L001_17592_1 lane1_3600STDY6184040_GGCTGCTT_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184041_CAGGGTCG_L001_17592_1 lane1_3600STDY6184042_CTCGTCGA_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184043_TCTACAGT_L001_17592_1 lane1_3600STDY6184044_CTTCTAGA_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184045_AACGGCTT_L001_17592_1 lane1_3600STDY6184046_ATAAGACT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184047_GTTTTTCG_L001_17592_1 lane1_3600STDY6184048_ATTGGTAT_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6184049_CGCCAGTA_L001_17592_1 lane1_3600STDY6184050_AAGCCGAA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184051_TGACCCAC_L001_17592_1 lane1_3600STDY6184052_ATTGCACA_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6184053_CTTTTGAT_L001_17592_1 lane1_3600STDY6184054_TAGCGAGA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184055_TTCGCAGG_L001_17592_1 lane1_3600STDY6184056_TAGTTATT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184057_TCCTCCGA_L001_17592_1 lane1_3600STDY6184058_GCGGGTCT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184059_GATTCTAT_L001_17592_1 lane1_3600STDY6184060_ATGCAAAG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184061_GTCTGAGG_L001_17592_1 lane1_3600STDY6184062_TCTGGCGA_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184063_AATTTGCG_L001_17592_1 lane1_3600STDY6184064_TGGGTTGG_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184065_AGTTGAAA_L001_17592_1 lane1_3600STDY6184066_GACCGGAA_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184067_GATCGAAC_L001_17592_1 lane1_3600STDY6184068_GTATAGGG_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184069_GGTAAGAG_L001_17592_1 lane1_3600STDY6184070_AGTCCGAT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184071_ATACAGGC_L001_17592_1 lane1_3600STDY6184072_TGAGACTC_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6184073_ACTCAGGA_L001_17592_1 lane1_3600STDY6184074_GTGTCTGA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184075_CTTGAATC_L001_17592_1 lane1_3600STDY6184076_CCGCATGA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184077_AAGTAACA_L001_17592_1 lane1_3600STDY6184078_GTGGTACT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184079_AGCTGTGC_L001_17592_1 lane1_3600STDY6184080_TTACCTTC_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6184081_TCCGGGTA_L001_17592_1 lane1_3600STDY6184082_CTACGTAA_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184083_TCGGACCG_L001_17592_1 lane1_3600STDY6184084_ATGCGTCG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184085_TTCTTAGC_L001_17592_1 lane1_3600STDY6184086_TGAGTAAG_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184087_AAGTGATA_L001_17592_1 lane1_3600STDY6184088_TCGATGCG_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184089_TATTCTGG_L001_17592_1 lane1_3600STDY6184090_AGCCGTGA_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184091_AAGCCTTC_L001_17592_1 lane1_3600STDY6184092_AGGTATCC_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184093_AGGATCTC_L001_17592_1 lane1_3600STDY6184094_CTGTTTGA_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184095_GGAATTTC_L001_17592_1 lane1_3600STDY6184096_TTGGAGCA_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6184097_AAGGTCTG_L001_17592_1 lane1_3600STDY6184098_AATTAGGC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184099_AATCGGGT_L001_17592_1 lane1_3600STDY6184100_AGGTAGAC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184101_CTTATTCC_L001_17592_1 lane1_3600STDY6184102_CAGGCTCT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184103_AAAGCACG_L001_17592_1 lane1_3600STDY6184104_GTATACAC_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184105_GGACATAT_L001_17592_1 lane1_3600STDY6184106_CGGTTGGG_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184107_GTCCGTGA_L001_17592_1 lane1_3600STDY6184108_GCCGAACC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184109_ACTTTACT_L001_17592_1 lane1_3600STDY6184110_GGGTCCAT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184111_ATAACTAG_L001_17592_1 lane1_3600STDY6184112_AATAGAGA_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184113_TCACCATT_L001_17592_1 lane1_3600STDY6184114_CGCCTGAT_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184115_GCGTGAAC_L001_17592_1 lane1_3600STDY6184116_TAAGGGTG_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184117_GGTGTCGA_L001_17592_1 lane1_3600STDY6184118_CCGTTAGG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184119_TGGCAAAA_L001_17592_1 lane1_3600STDY6184120_CCTACCCG_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6184121_AACAGCGC_L001_17592_1 lane1_3600STDY6184122_TATACATC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184123_AAGCGACT_L001_17592_1 lane1_3600STDY6184124_GAAGCGCA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184125_ACCTCTAC_L001_17592_1 lane1_3600STDY6184126_GATTGCGT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184127_GCTGGTTG_L001_17592_1 lane1_3600STDY6184128_ATCGTCCT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184129_GGACACGG_L001_17592_1 lane1_3600STDY6184130_CGCACCTA_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184131_CTTCGGCT_L001_17592_1 lane1_3600STDY6184132_CGAATCGA_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184133_TAACAACT_L001_17592_1 lane1_3600STDY6184134_AGCTCTTT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184135_TAATCCCT_L001_17592_1 lane1_3600STDY6184136_AGGACACT_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184137_TTACACTA_L001_17592_1 lane1_3600STDY6184138_AAACATCA_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184139_CCATAGCT_L001_17592_1 lane1_3600STDY6184140_GTTATGGC_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184141_ATCCCCTA_L001_17592_1 lane1_3600STDY6184142_CATACTAC_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6184143_CAATTGTT_L001_17592_1 lane1_3600STDY6184144_AAACCCGT_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184145_CAGATTTC_L001_17592_1 lane1_3600STDY6184146_GCGTAGGT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184147_GGCATTCG_L001_17592_1 lane1_3600STDY6184148_TGGGGCTT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184149_CTGACTAC_L001_17592_1 lane1_3600STDY6184150_AACTTTTA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184151_AGGGATTC_L001_17592_1 lane1_3600STDY6184152_CCGAGTAG_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6184153_GGGGACTA_L001_17592_1 lane1_3600STDY6184154_GGAGTTGA_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184155_AGCTCATC_L001_17592_1 lane1_3600STDY6184156_TAATCAAC_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184157_ACTGGTCG_L001_17592_1 lane1_3600STDY6184158_GACGATTG_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184159_AGCGATGA_L001_17592_1 lane1_3600STDY6184160_GAAGAGAT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184161_CGTATGCA_L001_17592_1 lane1_3600STDY6184162_CACGTGCG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184163_GCTTAAAC_L001_17592_1 lane1_3600STDY6184164_GTTCCGCA_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184165_GTATCGTC_L001_17592_1 lane1_3600STDY6184166_GTCCTCAC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184167_GTACGGAC_L001_17592_1 lane1_3600STDY6184168_CATTTTGC_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6184169_TCCTCTCT_L001_17592_1 lane1_3600STDY6184170_AGCAACGA_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184171_ACAGAAGA_L001_17592_1 lane1_3600STDY6184172_CGACCCTT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184173_CTGCCTAG_L001_17592_1 lane1_3600STDY6184174_GAGCGCAT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184175_AACTTATC_L001_17592_1 lane1_3600STDY6184176_CCGATGTA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184177_TTACTACC_L001_17592_1 lane1_3600STDY6184178_CAAGGAGC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184179_TGGTTGAC_L001_17592_1 lane1_3600STDY6184180_ACCTGCTG_L001_17592_1 
#>                                        "03"                                        "02"

show/hide code output

get_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 12250))
#> lane1_3600STDY6077864_ATCACGTT_L001_15986_1 lane1_3600STDY6077865_CGATGTTT_L001_15986_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6077866_TTAGGCAT_L001_15986_1 lane1_3600STDY6077867_TGACCACT_L001_15986_1 
#>                                       "012"                                       "012" 
#> lane1_3600STDY6077868_ACAGTGGT_L001_15986_1 lane1_3600STDY6077869_GCCAATGT_L001_15986_1 
#>                                       "012"                                       "012" 
#> lane1_3600STDY6077870_CAGATCTG_L001_15986_1 lane1_3600STDY6077871_ACTTGATG_L001_15986_1 
#>                                       "012"                                       "012" 
#> lane1_3600STDY6077872_GATCAGCG_L001_15986_1 lane1_3600STDY6077873_TAGCTTGT_L001_15986_1 
#>                                       "012"                                       "012" 
#> lane1_3600STDY6077874_GGCTACAG_L001_15986_1 lane1_3600STDY6077875_CTTGTACT_L001_15986_1 
#>                                       "012"                                       "012" 
#> lane1_3600STDY6077876_TGGTTGTT_L001_15986_1 lane1_3600STDY6077877_TCTCGGTT_L001_15986_1 
#>                                       "012"                                       "012" 
#> lane1_3600STDY6077878_TAAGCGTT_L001_15986_1 lane1_3600STDY6077879_TCCGTCTT_L001_15986_1 
#>                                       "012"                                       "012" 
#> lane1_3600STDY6077880_TGTACCTT_L001_15986_1 lane1_3600STDY6077881_TTCTGTGT_L001_15986_1 
#>                                       "012"                                       "012" 
#> lane1_3600STDY6077882_TCTGCTGT_L001_15986_1 lane1_3600STDY6077883_TTGGAGGT_L001_15986_1 
#>                                       "012"                                        "02" 
#> lane1_3600STDY6077884_TCGAGCGT_L001_15986_1 lane1_3600STDY6077885_TGATACGT_L001_15986_1 
#>                                       "012"                                       "012" 
#> lane1_3600STDY6077886_TGCATAGT_L001_15986_1 lane1_3600STDY6077887_TTGACTCT_L001_15986_1 
#>                                       "012"                                       "012" 
#> lane1_3600STDY6077888_TGCGATCT_L001_15986_1 lane1_3600STDY6077889_TTCCTGCT_L001_15986_1 
#>                                       "012"                                       "012" 
#> lane1_3600STDY6077890_TAGTGACT_L001_15986_1 lane1_3600STDY6077891_TACAGGAT_L001_15986_1 
#>                                       "012"                                       "012" 
#> lane1_3600STDY6077892_TCCTCAAT_L001_15986_1 lane1_3600STDY6077893_TGTGGTTG_L001_15986_1 
#>                                       "012"                                       "012" 
#> lane1_3600STDY6077894_TAGTCTTG_L001_15986_1 lane1_3600STDY6077895_TTCCATTG_L001_15986_1 
#>                                       "012"                                       "012" 
#> lane1_3600STDY6077896_TCGAAGTG_L001_15986_1 lane1_3600STDY6077897_TAACGCTG_L001_15986_1 
#>                                       "012"                                       "012" 
#> lane1_3600STDY6077898_TTGGTATG_L001_15986_1 lane1_3600STDY6077899_TGAACTGG_L001_15986_1 
#>                                       "012"                                        "02" 
#> lane1_3600STDY6077900_TACTTCGG_L001_15986_1 lane1_3600STDY6077901_TCTCACGG_L001_15986_1 
#>                                       "012"                                       "012" 
#> lane1_3600STDY6077902_TCAGGAGG_L001_15986_1 lane1_3600STDY6077903_TAAGTTCG_L001_15986_1 
#>                                       "012"                                       "012" 
#> lane1_3600STDY6077904_TCCAGTCG_L001_15986_1 lane1_3600STDY6077905_TGTATGCG_L001_15986_1 
#>                                        "02"                                       "012" 
#> lane1_3600STDY6077906_TCATTGAG_L001_15986_1 lane1_3600STDY6077907_TGGCTCAG_L001_15986_1 
#>                                       "012"                                       "012" 
#> lane1_3600STDY6077908_TATGCCAG_L001_15986_1 lane1_3600STDY6077909_TCAGATTC_L001_15986_1 
#>                                       "012"                                       "012" 
#> lane1_3600STDY6077910_TACTAGTC_L001_15986_1 lane1_3600STDY6077911_TTCAGCTC_L001_15986_1 
#>                                       "012"                                        "02" 
#> lane1_3600STDY6077912_TGTCTATC_L001_15986_1 lane1_3600STDY6077913_TATGTGGC_L001_15986_1 
#>                                       "012"                                       "012" 
#> lane1_3600STDY6077914_TTACTCGC_L001_15986_1 lane1_3600STDY6077915_TCGTTAGC_L001_15986_1 
#>                                        "02"                                       "012" 
#> lane1_3600STDY6077916_TACCGAGC_L001_15986_1 lane1_3600STDY6077917_TGTTCTCC_L001_15986_1 
#>                                       "012"                                       "012" 
#> lane1_3600STDY6077918_TTCGCACC_L001_15986_1 lane1_3600STDY6077919_TTGCGTAC_L001_15986_1 
#>                                       "012"                                       "012" 
#> lane1_3600STDY6077920_TCTACGAC_L001_15986_1 lane1_3600STDY6077921_TGACAGAC_L001_15986_1 
#>                                       "012"                                       "012" 
#> lane1_3600STDY6077922_TAGAACAC_L001_15986_1 lane1_3600STDY6077923_TCATCCTA_L001_15986_1 
#>                                       "012"                                       "012" 
#> lane1_3600STDY6077924_TGCTGATA_L001_15986_1 lane1_3600STDY6077925_TAGACGGA_L001_15986_1 
#>                                       "012"                                       "012" 
#> lane1_3600STDY6077926_TGTGAAGA_L001_15986_1 lane1_3600STDY6077927_TCTCTTCA_L001_15986_1 
#>                                       "012"                                       "012" 
#> lane1_3600STDY6077928_TTGTTCCA_L001_15986_1 lane1_3600STDY6077929_TGAAGCCA_L001_15986_1 
#>                                       "012"                                       "012" 
#> lane1_3600STDY6077930_TACCACCA_L001_15986_1 lane1_3600STDY6077931_TGCGTGAA_L001_15986_1 
#>                                       "012"                                       "012" 
#> lane1_3600STDY6077932_GGTGAGTT_L001_15986_1 lane1_3600STDY6077933_GATCTCTT_L001_15986_1 
#>                                       "012"                                        "02" 
#> lane1_3600STDY6077934_GTGTCCTT_L001_15986_1 lane1_3600STDY6077935_GACGGATT_L001_15986_1 
#>                                        "02"                                       "012" 
#> lane1_3600STDY6077936_GCAACATT_L001_15986_1 lane1_3600STDY6077937_GGTCGTGT_L001_15986_1 
#>                                       "012"                                       "012" 
#> lane1_3600STDY6077938_GAATCTGT_L001_15986_1 lane1_3600STDY6077939_GTACATCT_L001_15986_1 
#>                                       "012"                                       "012" 
#> lane1_3600STDY6077940_GAGGTGCT_L001_15986_1 lane1_3600STDY6077941_GCATGGCT_L001_15986_1 
#>                                       "012"                                       "012" 
#> lane1_3600STDY6077942_GTTAGCCT_L001_15986_1 lane1_3600STDY6077943_GTCGCTAT_L001_15986_1 
#>                                       "012"                                       "012" 
#> lane1_3600STDY6077944_GGAATGAT_L001_15986_1 lane1_3600STDY6077945_GAGCCAAT_L001_15986_1 
#>                                       "012"                                       "012" 
#> lane1_3600STDY6077946_GCTCCTTG_L001_15986_1 lane1_3600STDY6077947_GTAAGGTG_L001_15986_1 
#>                                       "012"                                       "012" 
#> lane1_3600STDY6077948_GAGGATGG_L001_15986_1 lane1_3600STDY6077949_GTTGTCGG_L001_15986_1 
#>                                       "012"                                       "012" 
#> lane1_3600STDY6077950_GGATTAGG_L001_15986_1 lane1_3600STDY6077951_GATAGAGG_L001_15986_1 
#>                                       "012"                                       "012" 
#> lane1_3600STDY6077952_GTGTGTCG_L001_15986_1 lane1_3600STDY6077953_GCAATCCG_L001_15986_1 
#>                                       "012"                                       "012" 
#> lane1_3600STDY6077954_GACCTTAG_L001_15986_1 lane1_3600STDY6077955_GCCTGTTC_L001_15986_1 
#>                                       "012"                                       "012" 
#> lane1_3600STDY6077956_GCACTGTC_L001_15986_1 lane1_3600STDY6077957_GCTAACTC_L001_15986_1 
#>                                       "012"                                       "012" 
#> lane1_3600STDY6077958_GATTCATC_L001_15986_1 lane1_3600STDY6077959_GTCTTGGC_L001_15986_1 
#>                                       "012"                                       "012" 
#> lane3_3600STDY6077960_ATCACGTT_L003_15987_1 lane3_3600STDY6077961_CGATGTTT_L003_15987_1 
#>                                        "02"                                        "02" 
#> lane3_3600STDY6077962_TTAGGCAT_L003_15987_1 lane3_3600STDY6077963_TGACCACT_L003_15987_1 
#>                                       "012"                                       "012" 
#> lane3_3600STDY6077964_ACAGTGGT_L003_15987_1 lane3_3600STDY6077965_GCCAATGT_L003_15987_1 
#>                                       "012"                                       "012" 
#> lane3_3600STDY6077966_CAGATCTG_L003_15987_1 lane3_3600STDY6077967_ACTTGATG_L003_15987_1 
#>                                       "012"                                       "012" 
#> lane3_3600STDY6077968_GATCAGCG_L003_15987_1 lane3_3600STDY6077969_TAGCTTGT_L003_15987_1 
#>                                       "012"                                       "012" 
#> lane3_3600STDY6077970_GGCTACAG_L003_15987_1 lane3_3600STDY6077971_CTTGTACT_L003_15987_1 
#>                                       "012"                                       "012" 
#> lane3_3600STDY6077972_TGGTTGTT_L003_15987_1 lane3_3600STDY6077973_TCTCGGTT_L003_15987_1 
#>                                       "012"                                       "012" 
#> lane3_3600STDY6077974_TAAGCGTT_L003_15987_1 lane3_3600STDY6077975_TCCGTCTT_L003_15987_1 
#>                                       "012"                                       "012" 
#> lane3_3600STDY6077976_TGTACCTT_L003_15987_1 lane3_3600STDY6077977_TTCTGTGT_L003_15987_1 
#>                                       "012"                                       "012" 
#> lane3_3600STDY6077978_TCTGCTGT_L003_15987_1 lane3_3600STDY6077979_TTGGAGGT_L003_15987_1 
#>                                        "02"                                       "012" 
#> lane3_3600STDY6077980_TCGAGCGT_L003_15987_1 lane3_3600STDY6077981_TGATACGT_L003_15987_1 
#>                                       "012"                                       "012" 
#> lane3_3600STDY6077982_TGCATAGT_L003_15987_1 lane3_3600STDY6077983_TTGACTCT_L003_15987_1 
#>                                       "012"                                       "012" 
#> lane3_3600STDY6077984_TGCGATCT_L003_15987_1 lane3_3600STDY6077985_TTCCTGCT_L003_15987_1 
#>                                       "012"                                       "012" 
#> lane3_3600STDY6077986_TAGTGACT_L003_15987_1 lane3_3600STDY6077987_TACAGGAT_L003_15987_1 
#>                                       "012"                                       "012" 
#> lane3_3600STDY6077988_TCCTCAAT_L003_15987_1 lane3_3600STDY6077989_TGTGGTTG_L003_15987_1 
#>                                       "012"                                       "012" 
#> lane3_3600STDY6077990_TAGTCTTG_L003_15987_1 lane3_3600STDY6077991_TTCCATTG_L003_15987_1 
#>                                       "012"                                       "012" 
#> lane3_3600STDY6077992_TCGAAGTG_L003_15987_1 lane3_3600STDY6077993_TAACGCTG_L003_15987_1 
#>                                       "012"                                       "012" 
#> lane3_3600STDY6077994_TTGGTATG_L003_15987_1 lane3_3600STDY6077995_TGAACTGG_L003_15987_1 
#>                                       "012"                                       "012" 
#> lane3_3600STDY6077996_TACTTCGG_L003_15987_1 lane3_3600STDY6077997_TCTCACGG_L003_15987_1 
#>                                       "012"                                        "02" 
#> lane3_3600STDY6077998_TCAGGAGG_L003_15987_1 lane3_3600STDY6077999_TAAGTTCG_L003_15987_1 
#>                                       "012"                                       "012" 
#> lane3_3600STDY6078000_TCCAGTCG_L003_15987_1 lane3_3600STDY6078001_TGTATGCG_L003_15987_1 
#>                                       "012"                                        "02" 
#> lane3_3600STDY6078002_TCATTGAG_L003_15987_1 lane3_3600STDY6078003_TGGCTCAG_L003_15987_1 
#>                                        "03"                                       "012" 
#> lane3_3600STDY6078004_TATGCCAG_L003_15987_1 lane3_3600STDY6078005_TCAGATTC_L003_15987_1 
#>                                       "012"                                       "012" 
#> lane3_3600STDY6078006_TACTAGTC_L003_15987_1 lane3_3600STDY6078007_TTCAGCTC_L003_15987_1 
#>                                       "012"                                       "012" 
#> lane3_3600STDY6078008_TGTCTATC_L003_15987_1 lane3_3600STDY6078009_TATGTGGC_L003_15987_1 
#>                                       "012"                                       "012" 
#> lane3_3600STDY6078010_TTACTCGC_L003_15987_1 lane3_3600STDY6078011_TCGTTAGC_L003_15987_1 
#>                                       "012"                                       "012" 
#> lane3_3600STDY6078012_TACCGAGC_L003_15987_1 lane3_3600STDY6078013_TGTTCTCC_L003_15987_1 
#>                                       "012"                                       "012" 
#> lane3_3600STDY6078014_TTCGCACC_L003_15987_1 lane3_3600STDY6078015_TTGCGTAC_L003_15987_1 
#>                                       "012"                                       "012" 
#> lane3_3600STDY6078016_TCTACGAC_L003_15987_1 lane3_3600STDY6078017_TGACAGAC_L003_15987_1 
#>                                       "012"                                       "012" 
#> lane3_3600STDY6078018_TAGAACAC_L003_15987_1 lane3_3600STDY6078019_TCATCCTA_L003_15987_1 
#>                                       "012"                                       "012" 
#> lane3_3600STDY6078020_TGCTGATA_L003_15987_1 lane3_3600STDY6078021_TAGACGGA_L003_15987_1 
#>                                       "012"                                       "012" 
#> lane3_3600STDY6078022_TGTGAAGA_L003_15987_1 lane3_3600STDY6078023_TCTCTTCA_L003_15987_1 
#>                                       "012"                                       "012" 
#> lane3_3600STDY6078024_TTGTTCCA_L003_15987_1 lane3_3600STDY6078025_TGAAGCCA_L003_15987_1 
#>                                       "012"                                       "012" 
#> lane3_3600STDY6078026_TACCACCA_L003_15987_1 lane3_3600STDY6078027_TGCGTGAA_L003_15987_1 
#>                                       "012"                                        "02" 
#> lane3_3600STDY6078028_GGTGAGTT_L003_15987_1 lane3_3600STDY6078029_GATCTCTT_L003_15987_1 
#>                                       "012"                                       "012" 
#> lane3_3600STDY6078030_GTGTCCTT_L003_15987_1 lane3_3600STDY6078031_GACGGATT_L003_15987_1 
#>                                       "012"                                       "012" 
#> lane3_3600STDY6078032_GCAACATT_L003_15987_1 lane3_3600STDY6078033_GGTCGTGT_L003_15987_1 
#>                                       "012"                                       "012" 
#> lane3_3600STDY6078034_GAATCTGT_L003_15987_1 lane3_3600STDY6078035_GTACATCT_L003_15987_1 
#>                                       "012"                                       "012" 
#> lane3_3600STDY6078036_GAGGTGCT_L003_15987_1 lane3_3600STDY6078037_GCATGGCT_L003_15987_1 
#>                                       "012"                                       "012" 
#> lane3_3600STDY6078038_GTTAGCCT_L003_15987_1 lane3_3600STDY6078039_GTCGCTAT_L003_15987_1 
#>                                       "012"                                       "012" 
#> lane3_3600STDY6078040_GGAATGAT_L003_15987_1 lane3_3600STDY6078041_GAGCCAAT_L003_15987_1 
#>                                       "012"                                       "012" 
#> lane3_3600STDY6078042_GCTCCTTG_L003_15987_1 lane3_3600STDY6078043_GTAAGGTG_L003_15987_1 
#>                                       "012"                                       "012" 
#> lane3_3600STDY6078044_GAGGATGG_L003_15987_1 lane3_3600STDY6078045_GTTGTCGG_L003_15987_1 
#>                                       "012"                                       "012" 
#> lane3_3600STDY6078046_GGATTAGG_L003_15987_1 lane3_3600STDY6078047_GATAGAGG_L003_15987_1 
#>                                       "012"                                       "012" 
#> lane3_3600STDY6078048_GTGTGTCG_L003_15987_1 lane3_3600STDY6078049_GCAATCCG_L003_15987_1 
#>                                       "012"                                       "012" 
#> lane3_3600STDY6078050_GACCTTAG_L003_15987_1 lane3_3600STDY6078051_GCCTGTTC_L003_15987_1 
#>                                       "012"                                       "012" 
#> lane3_3600STDY6078052_GCACTGTC_L003_15987_1 lane3_3600STDY6078053_GCTAACTC_L003_15987_1 
#>                                       "012"                                       "012" 
#> lane3_3600STDY6078054_GATTCATC_L003_15987_1 lane3_3600STDY6078055_GTCTTGGC_L003_15987_1 
#>                                       "012"                                       "012" 
#> lane1_3600STDY6167693_ATCACGTT_L001_17236_1 lane1_3600STDY6167694_CGATGTTT_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167695_TTAGGCAT_L001_17236_1 lane1_3600STDY6167696_TGACCACT_L001_17236_1 
#>                                        "03"                                       "011" 
#> lane1_3600STDY6167697_ACAGTGGT_L001_17236_1 lane1_3600STDY6167698_GCCAATGT_L001_17236_1 
#>                                        "02"                                       "011" 
#> lane1_3600STDY6167699_CAGATCTG_L001_17236_1 lane1_3600STDY6167700_ACTTGATG_L001_17236_1 
#>                                       "011"                                        "02" 
#> lane1_3600STDY6167701_GATCAGCG_L001_17236_1 lane1_3600STDY6167702_TAGCTTGT_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167703_GGCTACAG_L001_17236_1 lane1_3600STDY6167704_CTTGTACT_L001_17236_1 
#>                                       "014"                                        "03" 
#> lane1_3600STDY6167705_TGGTTGTT_L001_17236_1 lane1_3600STDY6167706_TCTCGGTT_L001_17236_1 
#>                                       "014"                                        "02" 
#> lane1_3600STDY6167707_TAAGCGTT_L001_17236_1 lane1_3600STDY6167708_TCCGTCTT_L001_17236_1 
#>                                        "02"                                       "013" 
#> lane1_3600STDY6167709_TGTACCTT_L001_17236_1 lane1_3600STDY6167710_TTCTGTGT_L001_17236_1 
#>                                       "011"                                        "02" 
#> lane1_3600STDY6167711_TCTGCTGT_L001_17236_1 lane1_3600STDY6167712_TTGGAGGT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167713_TCGAGCGT_L001_17236_1 lane1_3600STDY6167714_TGATACGT_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167715_TGCATAGT_L001_17236_1 lane1_3600STDY6167716_TTGACTCT_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167717_TGCGATCT_L001_17236_1 lane1_3600STDY6167718_TTCCTGCT_L001_17236_1 
#>                                       "013"                                        "02" 
#> lane1_3600STDY6167719_TAGTGACT_L001_17236_1 lane1_3600STDY6167720_TACAGGAT_L001_17236_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6167721_TCCTCAAT_L001_17236_1 lane1_3600STDY6167722_TGTGGTTG_L001_17236_1 
#>                                        "03"                                       "011" 
#> lane1_3600STDY6167723_TAGTCTTG_L001_17236_1 lane1_3600STDY6167724_TTCCATTG_L001_17236_1 
#>                                       "011"                                        "02" 
#> lane1_3600STDY6167725_TCGAAGTG_L001_17236_1 lane1_3600STDY6167726_TAACGCTG_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167727_TTGGTATG_L001_17236_1 lane1_3600STDY6167728_TGAACTGG_L001_17236_1 
#>                                       "013"                                       "012" 
#> lane1_3600STDY6167729_TACTTCGG_L001_17236_1 lane1_3600STDY6167730_TCTCACGG_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167731_TCAGGAGG_L001_17236_1 lane1_3600STDY6167732_TAAGTTCG_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167733_TCCAGTCG_L001_17236_1 lane1_3600STDY6167734_TGTATGCG_L001_17236_1 
#>                                       "011"                                        "02" 
#> lane1_3600STDY6167735_TCATTGAG_L001_17236_1 lane1_3600STDY6167736_TGGCTCAG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167737_TATGCCAG_L001_17236_1 lane1_3600STDY6167738_TCAGATTC_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167739_TACTAGTC_L001_17236_1 lane1_3600STDY6167740_TTCAGCTC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167741_TGTCTATC_L001_17236_1 lane1_3600STDY6167742_TATGTGGC_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167743_TTACTCGC_L001_17236_1 lane1_3600STDY6167744_TCGTTAGC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167745_TACCGAGC_L001_17236_1 lane1_3600STDY6167746_TGTTCTCC_L001_17236_1 
#>                                        "03"                                       "011" 
#> lane1_3600STDY6167747_TTCGCACC_L001_17236_1 lane1_3600STDY6167748_TTGCGTAC_L001_17236_1 
#>                                        "03"                                       "011" 
#> lane1_3600STDY6167749_TCTACGAC_L001_17236_1 lane1_3600STDY6167750_TGACAGAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167751_TAGAACAC_L001_17236_1 lane1_3600STDY6167752_TCATCCTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167753_TGCTGATA_L001_17236_1 lane1_3600STDY6167754_TAGACGGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167755_TGTGAAGA_L001_17236_1 lane1_3600STDY6167756_TCTCTTCA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167757_TTGTTCCA_L001_17236_1 lane1_3600STDY6167758_TGAAGCCA_L001_17236_1 
#>                                       "011"                                        "02" 
#> lane1_3600STDY6167759_TACCACCA_L001_17236_1 lane1_3600STDY6167760_TGCGTGAA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167761_GGTGAGTT_L001_17236_1 lane1_3600STDY6167762_GATCTCTT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167763_GTGTCCTT_L001_17236_1 lane1_3600STDY6167764_GACGGATT_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167765_GCAACATT_L001_17236_1 lane1_3600STDY6167766_GGTCGTGT_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167767_GAATCTGT_L001_17236_1 lane1_3600STDY6167768_GTACATCT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167769_GAGGTGCT_L001_17236_1 lane1_3600STDY6167770_GCATGGCT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167771_GTTAGCCT_L001_17236_1 lane1_3600STDY6167772_GTCGCTAT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167773_GGAATGAT_L001_17236_1 lane1_3600STDY6167774_GAGCCAAT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167775_GCTCCTTG_L001_17236_1 lane1_3600STDY6167776_GTAAGGTG_L001_17236_1 
#>                                       "011"                                        "02" 
#> lane1_3600STDY6167777_GAGGATGG_L001_17236_1 lane1_3600STDY6167778_GTTGTCGG_L001_17236_1 
#>                                       "011"                                        "02" 
#> lane1_3600STDY6167779_GGATTAGG_L001_17236_1 lane1_3600STDY6167780_GATAGAGG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167781_GTGTGTCG_L001_17236_1 lane1_3600STDY6167782_GCAATCCG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167783_GACCTTAG_L001_17236_1 lane1_3600STDY6167784_GCCTGTTC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167785_GCACTGTC_L001_17236_1 lane1_3600STDY6167786_GCTAACTC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167787_GATTCATC_L001_17236_1 lane1_3600STDY6167788_GTCTTGGC_L001_17236_1 
#>                                       "011"                                        "02" 
#> lane1_3600STDY6167789_GTAGAAGC_L001_17236_1 lane1_3600STDY6167790_GATGGTCC_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167791_GTGCTACC_L001_17236_1 lane1_3600STDY6167792_GCGATTAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167793_GGTTGGAC_L001_17236_1 lane1_3600STDY6167794_GGCACAAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167795_GACACTTA_L001_17236_1 lane1_3600STDY6167796_GTGCAGTA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167797_GGAGTCTA_L001_17236_1 lane1_3600STDY6167798_GCTATGGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167799_GAGTGCGA_L001_17236_1 lane1_3600STDY6167800_GTAACCGA_L001_17236_1 
#>                                        "03"                                       "011" 
#> lane1_3600STDY6167801_GGCAAGCA_L001_17236_1 lane1_3600STDY6167802_GCCTTACA_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167803_GAACGACA_L001_17236_1 lane1_3600STDY6167804_GCAGGTAA_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167805_GCGTCGAA_L001_17236_1 lane1_3600STDY6167806_CGTTCGGT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167807_CACCAGGT_L001_17236_1 lane1_3600STDY6167808_CTGCGAGT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167809_CCGTATCT_L001_17236_1 lane1_3600STDY6167810_CGCTTCCT_L001_17236_1 
#>                                       "011"                                        "02" 
#> lane1_3600STDY6167811_CAAGACCT_L001_17236_1 lane1_3600STDY6167812_CACACACT_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167813_CCTAGTAT_L001_17236_1 lane1_3600STDY6167814_CCACCGAT_L001_17236_1 
#>                                        "02"                                       "011" 
#> lane1_3600STDY6167815_CTTCACAT_L001_17236_1 lane1_3600STDY6167816_CTATCATG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167817_CATGAATG_L001_17236_1 lane1_3600STDY6167818_CCACTTGG_L001_17236_1 
#>                                        "03"                                       "011" 
#> lane1_3600STDY6167819_CTGTACGG_L001_17236_1 lane1_3600STDY6167820_CTAGATAG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167821_CACTCGAG_L001_17236_1 lane1_3600STDY6167822_CCGACAAG_L001_17236_1 
#>                                        "03"                                       "013" 
#> lane1_3600STDY6167823_CTTGCTTC_L001_17236_1 lane1_3600STDY6167824_CATAGGTC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167825_CACATTGC_L001_17236_1 lane1_3600STDY6167826_CGCTAAGC_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167827_CAACCTCC_L001_17236_1 lane1_3600STDY6167828_CAGCTGAC_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167829_CTCAAGAC_L001_17236_1 lane1_3600STDY6167830_CGTGTCAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167831_CCATGCAC_L001_17236_1 lane1_3600STDY6167832_CGTTACTA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167833_CAAGTAGA_L001_17236_1 lane1_3600STDY6167834_CTCTCTCA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167835_CGACTGCA_L001_17236_1 lane1_3600STDY6167836_CCTGAGCA_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167837_CAGGCTAA_L001_17236_1 lane1_3600STDY6167838_CGGAGGAA_L001_17236_1 
#>                                       "014"                                       "011" 
#> lane1_3600STDY6167839_AGGAGATT_L001_17236_1 lane1_3600STDY6167840_AGGCAGCT_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167841_ACGTTCAT_L001_17236_1 lane1_3600STDY6167842_AACGTGTG_L001_17236_1 
#>                                        "03"                                       "013" 
#> lane1_3600STDY6167843_AGACCGTG_L001_17236_1 lane1_3600STDY6167844_ACCTCTGG_L001_17236_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6167845_ATCCTAGG_L001_17236_1 lane1_3600STDY6167846_ATCAACCG_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167847_AGGTCACG_L001_17236_1 lane1_3600STDY6167848_ACTGTTAG_L001_17236_1 
#>                                        "02"                                       "013" 
#> lane1_3600STDY6167849_AAGAGTAG_L001_17236_1 lane1_3600STDY6167850_ATTCGGAG_L001_17236_1 
#>                                       "013"                                       "014" 
#> lane1_3600STDY6167851_ACGCAATC_L001_17236_1 lane1_3600STDY6167852_ACAAGTGC_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167853_ATGGATCC_L001_17236_1 lane1_3600STDY6167854_AGAGGACC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167855_ATCTCCAC_L001_17236_1 lane1_3600STDY6167856_ATTGGCTA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167857_AATCCTGA_L001_17236_1 lane1_3600STDY6167858_AGGATTCA_L001_17236_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6167859_AACTGGCA_L001_17236_1 lane1_3600STDY6167860_ACAACGCA_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167861_CGGAAACA_L001_17236_1 lane1_3600STDY6167862_AATGAATT_L001_17236_1 
#>                                        "02"                                       "014" 
#> lane1_3600STDY6167863_TAGGACCC_L001_17236_1 lane1_3600STDY6167864_TCTCAGTG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167865_CATGGGAA_L001_17236_1 lane1_3600STDY6167866_CCTAAGAT_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167867_CTCAGATA_L001_17236_1 lane1_3600STDY6167868_CCCATAGG_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6167869_GCTATGAC_L001_17236_1 lane1_3600STDY6167870_GCTGTGAA_L001_17236_1 
#>                                       "011"                                        "02" 
#> lane1_3600STDY6167871_ACCTTCAA_L001_17236_1 lane1_3600STDY6167872_ACAAAGCC_L001_17236_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6167873_CAAAACCG_L001_17236_1 lane1_3600STDY6167874_GCTGGACA_L001_17236_1 
#>                                        "02"                                       "014" 
#> lane1_3600STDY6167875_AAGTCGTA_L001_17236_1 lane1_3600STDY6167876_CATCCGTA_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167877_TTGTGTCT_L001_17236_1 lane1_3600STDY6167878_TGCTCTAG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167879_ACCCAACA_L001_17236_1 lane1_3600STDY6167880_CGATCTGA_L001_17236_1 
#>                                        "02"                                       "011" 
#> lane1_3600STDY6167881_GTTCCACG_L001_17236_1 lane1_3600STDY6167882_ACTCTTTC_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167883_TATTGGAG_L001_17236_1 lane1_3600STDY6167884_TAAACATA_L001_17236_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6167885_GTAAGATA_L001_17236_1 lane1_3600STDY6167886_TACCGCAA_L001_17236_1 
#>                                        "03"                                       "013" 
#> lane1_3600STDY6167887_TATCTCCT_L001_17236_1 lane1_3600STDY6167888_TGTCATCT_L001_17236_1 
#>                                        "03"                                       "011" 
#> lane1_3600STDY6167889_ATAGCTCT_L001_17236_1 lane1_3600STDY6167890_AGTCCAAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167891_TTTGGGCA_L001_17236_1 lane1_3600STDY6167892_TCTGACGC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167893_TGTCGACT_L001_17236_1 lane1_3600STDY6167894_GTCACGTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167895_TTGAGCGA_L001_17236_1 lane1_3600STDY6167896_GAGACATA_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6167897_GTCAAGCT_L001_17236_1 lane1_3600STDY6167898_AGCAAGTT_L001_17236_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6167899_GACGCTCA_L001_17236_1 lane1_3600STDY6167900_ACGGCAGC_L001_17236_1 
#>                                       "011"                                        "03" 
#> lane1_3600STDY6167901_AGAACTGA_L001_17236_1 lane1_3600STDY6167902_CGCCTTTG_L001_17236_1 
#>                                        "03"                                       "011" 
#> lane1_3600STDY6167903_TAAGGTCA_L001_17236_1 lane1_3600STDY6167904_ACGTTGGC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167905_CCAGCTTA_L001_17236_1 lane1_3600STDY6167906_GAATCCTA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167907_ACTTCGTA_L001_17236_1 lane1_3600STDY6167908_TAGTCGGT_L001_17236_1 
#>                                       "013"                                        "02" 
#> lane1_3600STDY6167909_CGCACGAG_L001_17236_1 lane1_3600STDY6167910_ACGTACTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167911_AGCGCCAA_L001_17236_1 lane1_3600STDY6167912_GCCTGCCC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167913_AGGACGAT_L001_17236_1 lane1_3600STDY6167914_CTTGACCG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167915_AGGTCTAA_L001_17236_1 lane1_3600STDY6167916_CGAGATCC_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167917_ATTAGCGG_L001_17236_1 lane1_3600STDY6167918_GCGCTGAT_L001_17236_1 
#>                                       "011"                                        "02" 
#> lane1_3600STDY6167919_TGCTGAAC_L001_17236_1 lane1_3600STDY6167920_GAGGGCAG_L001_17236_1 
#>                                       "014"                                        "02" 
#> lane1_3600STDY6167921_GTTTTCAC_L001_17236_1 lane1_3600STDY6167922_GAGATGCC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167923_TTGAGAAG_L001_17236_1 lane1_3600STDY6167924_GCATCCGG_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167925_GTCACCAG_L001_17236_1 lane1_3600STDY6167926_GAGGTCGC_L001_17236_1 
#>                                       "011"                                        "03" 
#> lane1_3600STDY6167927_AAGGGGTA_L001_17236_1 lane1_3600STDY6167928_TTTTACGT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167929_TTCCTACA_L001_17236_1 lane1_3600STDY6167930_AGTGTAGT_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167931_GTGGCCAA_L001_17236_1 lane1_3600STDY6167932_AAATACTC_L001_17236_1 
#>                                       "013"                                       "014" 
#> lane1_3600STDY6167933_CACCCGTC_L001_17236_1 lane1_3600STDY6167934_TCGTGGTT_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167935_ACTTGGGG_L001_17236_1 lane1_3600STDY6167936_GGCTGCTT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167937_CAGGGTCG_L001_17236_1 lane1_3600STDY6167938_CTCGTCGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167939_TCTACAGT_L001_17236_1 lane1_3600STDY6167940_CTTCTAGA_L001_17236_1 
#>                                       "011"                                        "03" 
#> lane1_3600STDY6167941_AACGGCTT_L001_17236_1 lane1_3600STDY6167942_ATAAGACT_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167943_GTTTTTCG_L001_17236_1 lane1_3600STDY6167944_ATTGGTAT_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167945_CGCCAGTA_L001_17236_1 lane1_3600STDY6167946_AAGCCGAA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167947_TGACCCAC_L001_17236_1 lane1_3600STDY6167948_ATTGCACA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167949_CTTTTGAT_L001_17236_1 lane1_3600STDY6167950_TAGCGAGA_L001_17236_1 
#>                                       "011"                                        "02" 
#> lane1_3600STDY6167951_TTCGCAGG_L001_17236_1 lane1_3600STDY6167952_TAGTTATT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167953_TCCTCCGA_L001_17236_1 lane1_3600STDY6167954_GCGGGTCT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167955_GATTCTAT_L001_17236_1 lane1_3600STDY6167956_ATGCAAAG_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6167957_GTCTGAGG_L001_17236_1 lane1_3600STDY6167958_TCTGGCGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167959_AATTTGCG_L001_17236_1 lane1_3600STDY6167960_TGGGTTGG_L001_17236_1 
#>                                       "011"                                        "03" 
#> lane1_3600STDY6167961_AGTTGAAA_L001_17236_1 lane1_3600STDY6167962_GACCGGAA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167963_GATCGAAC_L001_17236_1 lane1_3600STDY6167964_GTATAGGG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167965_GGTAAGAG_L001_17236_1 lane1_3600STDY6167966_AGTCCGAT_L001_17236_1 
#>                                        "02"                                       "011" 
#> lane1_3600STDY6167967_ATACAGGC_L001_17236_1 lane1_3600STDY6167968_TGAGACTC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167969_ACTCAGGA_L001_17236_1 lane1_3600STDY6167970_GTGTCTGA_L001_17236_1 
#>                                       "011"                                        "03" 
#> lane1_3600STDY6167971_CTTGAATC_L001_17236_1 lane1_3600STDY6167972_CCGCATGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167973_AAGTAACA_L001_17236_1 lane1_3600STDY6167974_GTGGTACT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167975_AGCTGTGC_L001_17236_1 lane1_3600STDY6167976_TTACCTTC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167977_TCCGGGTA_L001_17236_1 lane1_3600STDY6167978_CTACGTAA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167979_TCGGACCG_L001_17236_1 lane1_3600STDY6167980_ATGCGTCG_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6167981_TTCTTAGC_L001_17236_1 lane1_3600STDY6167982_TGAGTAAG_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6167983_AAGTGATA_L001_17236_1 lane1_3600STDY6167984_TCGATGCG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167985_TATTCTGG_L001_17236_1 lane1_3600STDY6167986_AGCCGTGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167987_AAGCCTTC_L001_17236_1 lane1_3600STDY6167988_AGGTATCC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167989_AGGATCTC_L001_17236_1 lane1_3600STDY6167990_CTGTTTGA_L001_17236_1 
#>                                        "02"                                       "011" 
#> lane1_3600STDY6167991_GGAATTTC_L001_17236_1 lane1_3600STDY6167992_TTGGAGCA_L001_17236_1 
#>                                       "013"                                        "03" 
#> lane1_3600STDY6167993_AAGGTCTG_L001_17236_1 lane1_3600STDY6167994_AATTAGGC_L001_17236_1 
#>                                        "03"                                       "011" 
#> lane1_3600STDY6167995_AATCGGGT_L001_17236_1 lane1_3600STDY6167996_AGGTAGAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167997_CTTATTCC_L001_17236_1 lane1_3600STDY6167998_CAGGCTCT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6167999_AAAGCACG_L001_17236_1 lane1_3600STDY6168000_GTATACAC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168001_GGACATAT_L001_17236_1 lane1_3600STDY6168002_CGGTTGGG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168003_GTCCGTGA_L001_17236_1 lane1_3600STDY6168004_GCCGAACC_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6168005_ACTTTACT_L001_17236_1 lane1_3600STDY6168006_GGGTCCAT_L001_17236_1 
#>                                        "03"                                       "013" 
#> lane1_3600STDY6168007_ATAACTAG_L001_17236_1 lane1_3600STDY6168008_AATAGAGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168009_TCACCATT_L001_17236_1 lane1_3600STDY6168010_CGCCTGAT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168011_GCGTGAAC_L001_17236_1 lane1_3600STDY6168012_TAAGGGTG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168013_GGTGTCGA_L001_17236_1 lane1_3600STDY6168014_CCGTTAGG_L001_17236_1 
#>                                       "011"                                       "013" 
#> lane1_3600STDY6168015_TGGCAAAA_L001_17236_1 lane1_3600STDY6168016_CCTACCCG_L001_17236_1 
#>                                       "011"                                        "02" 
#> lane1_3600STDY6168017_AACAGCGC_L001_17236_1 lane1_3600STDY6168018_TATACATC_L001_17236_1 
#>                                       "013"                                        "02" 
#> lane1_3600STDY6168019_AAGCGACT_L001_17236_1 lane1_3600STDY6168020_GAAGCGCA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168021_ACCTCTAC_L001_17236_1 lane1_3600STDY6168022_GATTGCGT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168023_GCTGGTTG_L001_17236_1 lane1_3600STDY6168024_ATCGTCCT_L001_17236_1 
#>                                        "02"                                       "011" 
#> lane1_3600STDY6168025_GGACACGG_L001_17236_1 lane1_3600STDY6168026_CGCACCTA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168027_CTTCGGCT_L001_17236_1 lane1_3600STDY6168028_CGAATCGA_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6168029_TAACAACT_L001_17236_1 lane1_3600STDY6168030_AGCTCTTT_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168031_TAATCCCT_L001_17236_1 lane1_3600STDY6168032_AGGACACT_L001_17236_1 
#>                                       "011"                                        "03" 
#> lane1_3600STDY6168033_TTACACTA_L001_17236_1 lane1_3600STDY6168034_AAACATCA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168035_CCATAGCT_L001_17236_1 lane1_3600STDY6168036_GTTATGGC_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168037_ATCCCCTA_L001_17236_1 lane1_3600STDY6168038_CATACTAC_L001_17236_1 
#>                                       "011"                                       "014" 
#> lane1_3600STDY6168039_CAATTGTT_L001_17236_1 lane1_3600STDY6168040_AAACCCGT_L001_17236_1 
#>                                       "014"                                        "02" 
#> lane1_3600STDY6168041_CAGATTTC_L001_17236_1 lane1_3600STDY6168042_GCGTAGGT_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6168043_GGCATTCG_L001_17236_1 lane1_3600STDY6168044_TGGGGCTT_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168045_CTGACTAC_L001_17236_1 lane1_3600STDY6168046_AACTTTTA_L001_17236_1 
#>                                       "011"                                        "03" 
#> lane1_3600STDY6168047_AGGGATTC_L001_17236_1 lane1_3600STDY6168048_CCGAGTAG_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168049_GGGGACTA_L001_17236_1 lane1_3600STDY6168050_GGAGTTGA_L001_17236_1 
#>                                       "011"                                       "011" 
#> lane1_3600STDY6168051_AGCTCATC_L001_17236_1 lane1_3600STDY6168052_TAATCAAC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168053_ACTGGTCG_L001_17236_1 lane1_3600STDY6168054_GACGATTG_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168055_AGCGATGA_L001_17236_1 lane1_3600STDY6168056_GAAGAGAT_L001_17236_1 
#>                                       "011"                                        "03" 
#> lane1_3600STDY6168057_CGTATGCA_L001_17236_1 lane1_3600STDY6168058_CACGTGCG_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6168059_GCTTAAAC_L001_17236_1 lane1_3600STDY6168060_GTTCCGCA_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6168061_GTATCGTC_L001_17236_1 lane1_3600STDY6168062_GTCCTCAC_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168063_GTACGGAC_L001_17236_1 lane1_3600STDY6168064_CATTTTGC_L001_17236_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6168065_TCCTCTCT_L001_17236_1 lane1_3600STDY6168066_AGCAACGA_L001_17236_1 
#>                                       "014"                                       "013" 
#> lane1_3600STDY6168067_ACAGAAGA_L001_17236_1 lane1_3600STDY6168068_CGACCCTT_L001_17236_1 
#>                                       "013"                                       "011" 
#> lane1_3600STDY6168069_CTGCCTAG_L001_17236_1 lane1_3600STDY6168070_GAGCGCAT_L001_17236_1 
#>                                        "02"                                       "013" 
#> lane1_3600STDY6168071_AACTTATC_L001_17236_1 lane1_3600STDY6168072_CCGATGTA_L001_17236_1 
#>                                       "013"                                       "013" 
#> lane1_3600STDY6168073_TTACTACC_L001_17236_1 lane1_3600STDY6168074_CAAGGAGC_L001_17236_1 
#>                                       "013"                                       "014" 
#> lane1_3600STDY6168075_TGGTTGAC_L001_17236_1 lane1_3600STDY6168076_ACCTGCTG_L001_17236_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184181_ATCACGTT_L004_17480_1 lane4_3600STDY6184182_CGATGTTT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184183_TTAGGCAT_L004_17480_1 lane4_3600STDY6184184_TGACCACT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184185_ACAGTGGT_L004_17480_1 lane4_3600STDY6184186_GCCAATGT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184187_CAGATCTG_L004_17480_1 lane4_3600STDY6184188_ACTTGATG_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184189_GATCAGCG_L004_17480_1 lane4_3600STDY6184190_TAGCTTGT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184191_GGCTACAG_L004_17480_1 lane4_3600STDY6184192_CTTGTACT_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184193_TGGTTGTT_L004_17480_1 lane4_3600STDY6184194_TCTCGGTT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184195_TAAGCGTT_L004_17480_1 lane4_3600STDY6184196_TCCGTCTT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184197_TGTACCTT_L004_17480_1 lane4_3600STDY6184198_TTCTGTGT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184199_TCTGCTGT_L004_17480_1 lane4_3600STDY6184200_TTGGAGGT_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184201_TCGAGCGT_L004_17480_1 lane4_3600STDY6184202_TGATACGT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184203_TGCATAGT_L004_17480_1 lane4_3600STDY6184204_TTGACTCT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184205_TGCGATCT_L004_17480_1 lane4_3600STDY6184206_TTCCTGCT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184207_TAGTGACT_L004_17480_1 lane4_3600STDY6184208_TACAGGAT_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184209_TCCTCAAT_L004_17480_1 lane4_3600STDY6184210_TGTGGTTG_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184211_TAGTCTTG_L004_17480_1 lane4_3600STDY6184212_TTCCATTG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184213_TCGAAGTG_L004_17480_1 lane4_3600STDY6184214_TAACGCTG_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184215_TTGGTATG_L004_17480_1 lane4_3600STDY6184216_TGAACTGG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184217_TACTTCGG_L004_17480_1 lane4_3600STDY6184218_TCTCACGG_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184219_TCAGGAGG_L004_17480_1 lane4_3600STDY6184220_TAAGTTCG_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184221_TCCAGTCG_L004_17480_1 lane4_3600STDY6184222_TGTATGCG_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184223_TCATTGAG_L004_17480_1 lane4_3600STDY6184224_TGGCTCAG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184225_TATGCCAG_L004_17480_1 lane4_3600STDY6184226_TCAGATTC_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184227_TACTAGTC_L004_17480_1 lane4_3600STDY6184228_TTCAGCTC_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184229_TGTCTATC_L004_17480_1 lane4_3600STDY6184230_TATGTGGC_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184231_TTACTCGC_L004_17480_1 lane4_3600STDY6184232_TCGTTAGC_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184233_TACCGAGC_L004_17480_1 lane4_3600STDY6184234_TGTTCTCC_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184235_TTCGCACC_L004_17480_1 lane4_3600STDY6184236_TTGCGTAC_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184237_TCTACGAC_L004_17480_1 lane4_3600STDY6184238_TGACAGAC_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184239_TAGAACAC_L004_17480_1 lane4_3600STDY6184240_TCATCCTA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184241_TGCTGATA_L004_17480_1 lane4_3600STDY6184242_TAGACGGA_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184243_TGTGAAGA_L004_17480_1 lane4_3600STDY6184244_TCTCTTCA_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184245_TTGTTCCA_L004_17480_1 lane4_3600STDY6184246_TGAAGCCA_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184247_TACCACCA_L004_17480_1 lane4_3600STDY6184248_TGCGTGAA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184249_GGTGAGTT_L004_17480_1 lane4_3600STDY6184250_GATCTCTT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184251_GTGTCCTT_L004_17480_1 lane4_3600STDY6184252_GACGGATT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184253_GCAACATT_L004_17480_1 lane4_3600STDY6184254_GGTCGTGT_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184255_GAATCTGT_L004_17480_1 lane4_3600STDY6184256_GTACATCT_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184257_GAGGTGCT_L004_17480_1 lane4_3600STDY6184258_GCATGGCT_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184259_GTTAGCCT_L004_17480_1 lane4_3600STDY6184260_GTCGCTAT_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184261_GGAATGAT_L004_17480_1 lane4_3600STDY6184262_GAGCCAAT_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184263_GCTCCTTG_L004_17480_1 lane4_3600STDY6184264_GTAAGGTG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184265_GAGGATGG_L004_17480_1 lane4_3600STDY6184266_GTTGTCGG_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184267_GGATTAGG_L004_17480_1 lane4_3600STDY6184268_GATAGAGG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184269_GTGTGTCG_L004_17480_1 lane4_3600STDY6184270_GCAATCCG_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184271_GACCTTAG_L004_17480_1 lane4_3600STDY6184272_GCCTGTTC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184273_GCACTGTC_L004_17480_1 lane4_3600STDY6184274_GCTAACTC_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184275_GATTCATC_L004_17480_1 lane4_3600STDY6184276_GTCTTGGC_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184277_GTAGAAGC_L004_17480_1 lane4_3600STDY6184278_GATGGTCC_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184279_GTGCTACC_L004_17480_1 lane4_3600STDY6184280_GCGATTAC_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184281_GGTTGGAC_L004_17480_1 lane4_3600STDY6184282_GGCACAAC_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184283_GACACTTA_L004_17480_1 lane4_3600STDY6184284_GTGCAGTA_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184285_GGAGTCTA_L004_17480_1 lane4_3600STDY6184286_GCTATGGA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184287_GAGTGCGA_L004_17480_1 lane4_3600STDY6184288_GTAACCGA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184289_GGCAAGCA_L004_17480_1 lane4_3600STDY6184290_GCCTTACA_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184291_GAACGACA_L004_17480_1 lane4_3600STDY6184292_GCAGGTAA_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184293_GCGTCGAA_L004_17480_1 lane4_3600STDY6184294_CGTTCGGT_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184295_CACCAGGT_L004_17480_1 lane4_3600STDY6184296_CTGCGAGT_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184297_CCGTATCT_L004_17480_1 lane4_3600STDY6184298_CGCTTCCT_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184299_CAAGACCT_L004_17480_1 lane4_3600STDY6184300_CACACACT_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184301_CCTAGTAT_L004_17480_1 lane4_3600STDY6184302_CCACCGAT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184303_CTTCACAT_L004_17480_1 lane4_3600STDY6184304_CTATCATG_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184305_CATGAATG_L004_17480_1 lane4_3600STDY6184306_CCACTTGG_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184307_CTGTACGG_L004_17480_1 lane4_3600STDY6184308_CTAGATAG_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184309_CACTCGAG_L004_17480_1 lane4_3600STDY6184310_CCGACAAG_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184311_CTTGCTTC_L004_17480_1 lane4_3600STDY6184312_CATAGGTC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184313_CACATTGC_L004_17480_1 lane4_3600STDY6184314_CGCTAAGC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184315_CAACCTCC_L004_17480_1 lane4_3600STDY6184316_CAGCTGAC_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184317_CTCAAGAC_L004_17480_1 lane4_3600STDY6184318_CGTGTCAC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184319_CCATGCAC_L004_17480_1 lane4_3600STDY6184320_CGTTACTA_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184321_CAAGTAGA_L004_17480_1 lane4_3600STDY6184322_CTCTCTCA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184323_CGACTGCA_L004_17480_1 lane4_3600STDY6184324_CCTGAGCA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184325_CAGGCTAA_L004_17480_1 lane4_3600STDY6184326_CGGAGGAA_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184327_AGGAGATT_L004_17480_1 lane4_3600STDY6184328_AGGCAGCT_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184329_ACGTTCAT_L004_17480_1 lane4_3600STDY6184330_AACGTGTG_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184331_AGACCGTG_L004_17480_1 lane4_3600STDY6184332_ACCTCTGG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184333_ATCCTAGG_L004_17480_1 lane4_3600STDY6184334_ATCAACCG_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184335_AGGTCACG_L004_17480_1 lane4_3600STDY6184336_ACTGTTAG_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184337_AAGAGTAG_L004_17480_1 lane4_3600STDY6184338_ATTCGGAG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184339_ACGCAATC_L004_17480_1 lane4_3600STDY6184340_ACAAGTGC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184341_ATGGATCC_L004_17480_1 lane4_3600STDY6184342_AGAGGACC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184343_ATCTCCAC_L004_17480_1 lane4_3600STDY6184344_ATTGGCTA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184345_AATCCTGA_L004_17480_1 lane4_3600STDY6184346_AGGATTCA_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184347_AACTGGCA_L004_17480_1 lane4_3600STDY6184348_ACAACGCA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184349_CGGAAACA_L004_17480_1 lane4_3600STDY6184350_AATGAATT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184351_TAGGACCC_L004_17480_1 lane4_3600STDY6184352_TCTCAGTG_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184353_CATGGGAA_L004_17480_1 lane4_3600STDY6184354_CCTAAGAT_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184355_CTCAGATA_L004_17480_1 lane4_3600STDY6184356_CCCATAGG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184357_GCTATGAC_L004_17480_1 lane4_3600STDY6184358_GCTGTGAA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184359_ACCTTCAA_L004_17480_1 lane4_3600STDY6184360_ACAAAGCC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184361_CAAAACCG_L004_17480_1 lane4_3600STDY6184362_GCTGGACA_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184363_AAGTCGTA_L004_17480_1 lane4_3600STDY6184364_CATCCGTA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184365_TTGTGTCT_L004_17480_1 lane4_3600STDY6184366_TGCTCTAG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184367_ACCCAACA_L004_17480_1 lane4_3600STDY6184368_CGATCTGA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184369_GTTCCACG_L004_17480_1 lane4_3600STDY6184370_ACTCTTTC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184371_TATTGGAG_L004_17480_1 lane4_3600STDY6184372_TAAACATA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184373_GTAAGATA_L004_17480_1 lane4_3600STDY6184374_TACCGCAA_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184375_TATCTCCT_L004_17480_1 lane4_3600STDY6184376_TGTCATCT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184377_ATAGCTCT_L004_17480_1 lane4_3600STDY6184378_AGTCCAAC_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184379_TTTGGGCA_L004_17480_1 lane4_3600STDY6184380_TCTGACGC_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184381_TGTCGACT_L004_17480_1 lane4_3600STDY6184382_GTCACGTA_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184383_TTGAGCGA_L004_17480_1 lane4_3600STDY6184384_GAGACATA_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184385_GTCAAGCT_L004_17480_1 lane4_3600STDY6184386_AGCAAGTT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184387_GACGCTCA_L004_17480_1 lane4_3600STDY6184388_ACGGCAGC_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184389_AGAACTGA_L004_17480_1 lane4_3600STDY6184390_CGCCTTTG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184391_TAAGGTCA_L004_17480_1 lane4_3600STDY6184392_ACGTTGGC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184393_CCAGCTTA_L004_17480_1 lane4_3600STDY6184394_GAATCCTA_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184395_ACTTCGTA_L004_17480_1 lane4_3600STDY6184396_TAGTCGGT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184397_CGCACGAG_L004_17480_1 lane4_3600STDY6184398_ACGTACTA_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184399_AGCGCCAA_L004_17480_1 lane4_3600STDY6184400_GCCTGCCC_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184401_AGGACGAT_L004_17480_1 lane4_3600STDY6184402_CTTGACCG_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184403_AGGTCTAA_L004_17480_1 lane4_3600STDY6184404_CGAGATCC_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184405_ATTAGCGG_L004_17480_1 lane4_3600STDY6184406_GCGCTGAT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184407_TGCTGAAC_L004_17480_1 lane4_3600STDY6184408_GAGGGCAG_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184409_GTTTTCAC_L004_17480_1 lane4_3600STDY6184410_GAGATGCC_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184411_TTGAGAAG_L004_17480_1 lane4_3600STDY6184412_GCATCCGG_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184413_GTCACCAG_L004_17480_1 lane4_3600STDY6184414_GAGGTCGC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184415_AAGGGGTA_L004_17480_1 lane4_3600STDY6184416_TTTTACGT_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184417_TTCCTACA_L004_17480_1 lane4_3600STDY6184418_AGTGTAGT_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184419_GTGGCCAA_L004_17480_1 lane4_3600STDY6184420_AAATACTC_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184421_CACCCGTC_L004_17480_1 lane4_3600STDY6184422_TCGTGGTT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184423_ACTTGGGG_L004_17480_1 lane4_3600STDY6184424_GGCTGCTT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184425_CAGGGTCG_L004_17480_1 lane4_3600STDY6184426_CTCGTCGA_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184427_TCTACAGT_L004_17480_1 lane4_3600STDY6184428_CTTCTAGA_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184429_AACGGCTT_L004_17480_1 lane4_3600STDY6184430_ATAAGACT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184431_GTTTTTCG_L004_17480_1 lane4_3600STDY6184432_ATTGGTAT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184433_CGCCAGTA_L004_17480_1 lane4_3600STDY6184434_AAGCCGAA_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184435_TGACCCAC_L004_17480_1 lane4_3600STDY6184436_ATTGCACA_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184437_CTTTTGAT_L004_17480_1 lane4_3600STDY6184438_TAGCGAGA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184439_TTCGCAGG_L004_17480_1 lane4_3600STDY6184440_TAGTTATT_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184441_TCCTCCGA_L004_17480_1 lane4_3600STDY6184442_GCGGGTCT_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184443_GATTCTAT_L004_17480_1 lane4_3600STDY6184444_ATGCAAAG_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184445_GTCTGAGG_L004_17480_1 lane4_3600STDY6184446_TCTGGCGA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184447_AATTTGCG_L004_17480_1 lane4_3600STDY6184448_TGGGTTGG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184449_AGTTGAAA_L004_17480_1 lane4_3600STDY6184450_GACCGGAA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184451_GATCGAAC_L004_17480_1 lane4_3600STDY6184452_GTATAGGG_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184453_GGTAAGAG_L004_17480_1 lane4_3600STDY6184454_AGTCCGAT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184455_ATACAGGC_L004_17480_1 lane4_3600STDY6184456_TGAGACTC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184457_ACTCAGGA_L004_17480_1 lane4_3600STDY6184458_GTGTCTGA_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184459_CTTGAATC_L004_17480_1 lane4_3600STDY6184460_CCGCATGA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184461_AAGTAACA_L004_17480_1 lane4_3600STDY6184462_GTGGTACT_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184463_AGCTGTGC_L004_17480_1 lane4_3600STDY6184464_TTACCTTC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184465_TCCGGGTA_L004_17480_1 lane4_3600STDY6184466_CTACGTAA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184467_TCGGACCG_L004_17480_1 lane4_3600STDY6184468_ATGCGTCG_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184469_TTCTTAGC_L004_17480_1 lane4_3600STDY6184470_TGAGTAAG_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184471_AAGTGATA_L004_17480_1 lane4_3600STDY6184472_TCGATGCG_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184473_TATTCTGG_L004_17480_1 lane4_3600STDY6184474_AGCCGTGA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184475_AAGCCTTC_L004_17480_1 lane4_3600STDY6184476_AGGTATCC_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184477_AGGATCTC_L004_17480_1 lane4_3600STDY6184478_CTGTTTGA_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184479_GGAATTTC_L004_17480_1 lane4_3600STDY6184480_TTGGAGCA_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184481_AAGGTCTG_L004_17480_1 lane4_3600STDY6184482_AATTAGGC_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184483_AATCGGGT_L004_17480_1 lane4_3600STDY6184484_AGGTAGAC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184485_CTTATTCC_L004_17480_1 lane4_3600STDY6184486_CAGGCTCT_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184487_AAAGCACG_L004_17480_1 lane4_3600STDY6184488_GTATACAC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184489_GGACATAT_L004_17480_1 lane4_3600STDY6184490_CGGTTGGG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184491_GTCCGTGA_L004_17480_1 lane4_3600STDY6184492_GCCGAACC_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184493_ACTTTACT_L004_17480_1 lane4_3600STDY6184494_GGGTCCAT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184495_ATAACTAG_L004_17480_1 lane4_3600STDY6184496_AATAGAGA_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184497_TCACCATT_L004_17480_1 lane4_3600STDY6184498_CGCCTGAT_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184499_GCGTGAAC_L004_17480_1 lane4_3600STDY6184500_TAAGGGTG_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184501_GGTGTCGA_L004_17480_1 lane4_3600STDY6184502_CCGTTAGG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184503_TGGCAAAA_L004_17480_1 lane4_3600STDY6184504_CCTACCCG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184505_AACAGCGC_L004_17480_1 lane4_3600STDY6184506_TATACATC_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184507_AAGCGACT_L004_17480_1 lane4_3600STDY6184508_GAAGCGCA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184509_ACCTCTAC_L004_17480_1 lane4_3600STDY6184510_GATTGCGT_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184511_GCTGGTTG_L004_17480_1 lane4_3600STDY6184512_ATCGTCCT_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184513_GGACACGG_L004_17480_1 lane4_3600STDY6184514_CGCACCTA_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184515_CTTCGGCT_L004_17480_1 lane4_3600STDY6184516_CGAATCGA_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184517_TAACAACT_L004_17480_1 lane4_3600STDY6184518_AGCTCTTT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184519_TAATCCCT_L004_17480_1 lane4_3600STDY6184520_AGGACACT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184521_TTACACTA_L004_17480_1 lane4_3600STDY6184522_AAACATCA_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184523_CCATAGCT_L004_17480_1 lane4_3600STDY6184524_GTTATGGC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184525_ATCCCCTA_L004_17480_1 lane4_3600STDY6184526_CATACTAC_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184527_CAATTGTT_L004_17480_1 lane4_3600STDY6184528_AAACCCGT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184529_CAGATTTC_L004_17480_1 lane4_3600STDY6184530_GCGTAGGT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184531_GGCATTCG_L004_17480_1 lane4_3600STDY6184532_TGGGGCTT_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184533_CTGACTAC_L004_17480_1 lane4_3600STDY6184534_AACTTTTA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184535_AGGGATTC_L004_17480_1 lane4_3600STDY6184536_CCGAGTAG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184537_GGGGACTA_L004_17480_1 lane4_3600STDY6184538_GGAGTTGA_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184539_AGCTCATC_L004_17480_1 lane4_3600STDY6184540_TAATCAAC_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184541_ACTGGTCG_L004_17480_1 lane4_3600STDY6184542_GACGATTG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184543_AGCGATGA_L004_17480_1 lane4_3600STDY6184544_GAAGAGAT_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184545_CGTATGCA_L004_17480_1 lane4_3600STDY6184546_CACGTGCG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184547_GCTTAAAC_L004_17480_1 lane4_3600STDY6184548_GTTCCGCA_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184549_GTATCGTC_L004_17480_1 lane4_3600STDY6184550_GTCCTCAC_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184551_GTACGGAC_L004_17480_1 lane4_3600STDY6184552_CATTTTGC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184553_TCCTCTCT_L004_17480_1 lane4_3600STDY6184554_AGCAACGA_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184555_ACAGAAGA_L004_17480_1 lane4_3600STDY6184556_CGACCCTT_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184557_CTGCCTAG_L004_17480_1 lane4_3600STDY6184558_GAGCGCAT_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184559_AACTTATC_L004_17480_1 lane4_3600STDY6184560_CCGATGTA_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184561_TTACTACC_L004_17480_1 lane4_3600STDY6184562_CAAGGAGC_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184563_TGGTTGAC_L004_17480_1 lane4_3600STDY6184564_ACCTGCTG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183797_ATCACGTT_L001_17592_1 lane1_3600STDY6183798_CGATGTTT_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6183799_TTAGGCAT_L001_17592_1 lane1_3600STDY6183800_TGACCACT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183801_ACAGTGGT_L001_17592_1 lane1_3600STDY6183802_GCCAATGT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183803_CAGATCTG_L001_17592_1 lane1_3600STDY6183804_ACTTGATG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183805_GATCAGCG_L001_17592_1 lane1_3600STDY6183806_TAGCTTGT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183807_GGCTACAG_L001_17592_1 lane1_3600STDY6183808_CTTGTACT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183809_TGGTTGTT_L001_17592_1 lane1_3600STDY6183810_TCTCGGTT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183811_TAAGCGTT_L001_17592_1 lane1_3600STDY6183812_TCCGTCTT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183813_TGTACCTT_L001_17592_1 lane1_3600STDY6183814_TTCTGTGT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183815_TCTGCTGT_L001_17592_1 lane1_3600STDY6183816_TTGGAGGT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183817_TCGAGCGT_L001_17592_1 lane1_3600STDY6183818_TGATACGT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183819_TGCATAGT_L001_17592_1 lane1_3600STDY6183820_TTGACTCT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183821_TGCGATCT_L001_17592_1 lane1_3600STDY6183822_TTCCTGCT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183823_TAGTGACT_L001_17592_1 lane1_3600STDY6183824_TACAGGAT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183825_TCCTCAAT_L001_17592_1 lane1_3600STDY6183826_TGTGGTTG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183827_TAGTCTTG_L001_17592_1 lane1_3600STDY6183828_TTCCATTG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183829_TCGAAGTG_L001_17592_1 lane1_3600STDY6183830_TAACGCTG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183831_TTGGTATG_L001_17592_1 lane1_3600STDY6183832_TGAACTGG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183833_TACTTCGG_L001_17592_1 lane1_3600STDY6183834_TCTCACGG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183835_TCAGGAGG_L001_17592_1 lane1_3600STDY6183836_TAAGTTCG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183837_TCCAGTCG_L001_17592_1 lane1_3600STDY6183838_TGTATGCG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183839_TCATTGAG_L001_17592_1 lane1_3600STDY6183840_TGGCTCAG_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6183841_TATGCCAG_L001_17592_1 lane1_3600STDY6183842_TCAGATTC_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6183843_TACTAGTC_L001_17592_1 lane1_3600STDY6183844_TTCAGCTC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183845_TGTCTATC_L001_17592_1 lane1_3600STDY6183846_TATGTGGC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183847_TTACTCGC_L001_17592_1 lane1_3600STDY6183848_TCGTTAGC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183849_TACCGAGC_L001_17592_1 lane1_3600STDY6183850_TGTTCTCC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183851_TTCGCACC_L001_17592_1 lane1_3600STDY6183852_TTGCGTAC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183853_TCTACGAC_L001_17592_1 lane1_3600STDY6183854_TGACAGAC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183855_TAGAACAC_L001_17592_1 lane1_3600STDY6183856_TCATCCTA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183857_TGCTGATA_L001_17592_1 lane1_3600STDY6183858_TAGACGGA_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6183859_TGTGAAGA_L001_17592_1 lane1_3600STDY6183860_TCTCTTCA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183861_TTGTTCCA_L001_17592_1 lane1_3600STDY6183862_TGAAGCCA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183863_TACCACCA_L001_17592_1 lane1_3600STDY6183864_TGCGTGAA_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183865_GGTGAGTT_L001_17592_1 lane1_3600STDY6183866_GATCTCTT_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6183867_GTGTCCTT_L001_17592_1 lane1_3600STDY6183868_GACGGATT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183869_GCAACATT_L001_17592_1 lane1_3600STDY6183870_GGTCGTGT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183871_GAATCTGT_L001_17592_1 lane1_3600STDY6183872_GTACATCT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183873_GAGGTGCT_L001_17592_1 lane1_3600STDY6183874_GCATGGCT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183875_GTTAGCCT_L001_17592_1 lane1_3600STDY6183876_GTCGCTAT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183877_GGAATGAT_L001_17592_1 lane1_3600STDY6183878_GAGCCAAT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183879_GCTCCTTG_L001_17592_1 lane1_3600STDY6183880_GTAAGGTG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183881_GAGGATGG_L001_17592_1 lane1_3600STDY6183882_GTTGTCGG_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183883_GGATTAGG_L001_17592_1 lane1_3600STDY6183884_GATAGAGG_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183885_GTGTGTCG_L001_17592_1 lane1_3600STDY6183886_GCAATCCG_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183887_GACCTTAG_L001_17592_1 lane1_3600STDY6183888_GCCTGTTC_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183889_GCACTGTC_L001_17592_1 lane1_3600STDY6183890_GCTAACTC_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6183891_GATTCATC_L001_17592_1 lane1_3600STDY6183892_GTCTTGGC_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6183893_GTAGAAGC_L001_17592_1 lane1_3600STDY6183894_GATGGTCC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183895_GTGCTACC_L001_17592_1 lane1_3600STDY6183896_GCGATTAC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183897_GGTTGGAC_L001_17592_1 lane1_3600STDY6183898_GGCACAAC_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183899_GACACTTA_L001_17592_1 lane1_3600STDY6183900_GTGCAGTA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183901_GGAGTCTA_L001_17592_1 lane1_3600STDY6183902_GCTATGGA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183903_GAGTGCGA_L001_17592_1 lane1_3600STDY6183904_GTAACCGA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183905_GGCAAGCA_L001_17592_1 lane1_3600STDY6183906_GCCTTACA_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6183907_GAACGACA_L001_17592_1 lane1_3600STDY6183908_GCAGGTAA_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183909_GCGTCGAA_L001_17592_1 lane1_3600STDY6183910_CGTTCGGT_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183911_CACCAGGT_L001_17592_1 lane1_3600STDY6183912_CTGCGAGT_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183913_CCGTATCT_L001_17592_1 lane1_3600STDY6183914_CGCTTCCT_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183915_CAAGACCT_L001_17592_1 lane1_3600STDY6183916_CACACACT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183917_CCTAGTAT_L001_17592_1 lane1_3600STDY6183918_CCACCGAT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183919_CTTCACAT_L001_17592_1 lane1_3600STDY6183920_CTATCATG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183921_CATGAATG_L001_17592_1 lane1_3600STDY6183922_CCACTTGG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183923_CTGTACGG_L001_17592_1 lane1_3600STDY6183924_CTAGATAG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183925_CACTCGAG_L001_17592_1 lane1_3600STDY6183926_CCGACAAG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183927_CTTGCTTC_L001_17592_1 lane1_3600STDY6183928_CATAGGTC_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183929_CACATTGC_L001_17592_1 lane1_3600STDY6183930_CGCTAAGC_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6183931_CAACCTCC_L001_17592_1 lane1_3600STDY6183932_CAGCTGAC_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183933_CTCAAGAC_L001_17592_1 lane1_3600STDY6183934_CGTGTCAC_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183935_CCATGCAC_L001_17592_1 lane1_3600STDY6183936_CGTTACTA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183937_CAAGTAGA_L001_17592_1 lane1_3600STDY6183938_CTCTCTCA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183939_CGACTGCA_L001_17592_1 lane1_3600STDY6183940_CCTGAGCA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183941_CAGGCTAA_L001_17592_1 lane1_3600STDY6183942_CGGAGGAA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183943_AGGAGATT_L001_17592_1 lane1_3600STDY6183944_AGGCAGCT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183945_ACGTTCAT_L001_17592_1 lane1_3600STDY6183946_AACGTGTG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183947_AGACCGTG_L001_17592_1 lane1_3600STDY6183948_ACCTCTGG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183949_ATCCTAGG_L001_17592_1 lane1_3600STDY6183950_ATCAACCG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183951_AGGTCACG_L001_17592_1 lane1_3600STDY6183952_ACTGTTAG_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183953_AAGAGTAG_L001_17592_1 lane1_3600STDY6183954_ATTCGGAG_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6183955_ACGCAATC_L001_17592_1 lane1_3600STDY6183956_ACAAGTGC_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183957_ATGGATCC_L001_17592_1 lane1_3600STDY6183958_AGAGGACC_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183959_ATCTCCAC_L001_17592_1 lane1_3600STDY6183960_ATTGGCTA_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183961_AATCCTGA_L001_17592_1 lane1_3600STDY6183962_AGGATTCA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183963_AACTGGCA_L001_17592_1 lane1_3600STDY6183964_ACAACGCA_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183965_CGGAAACA_L001_17592_1 lane1_3600STDY6183966_AATGAATT_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6183967_TAGGACCC_L001_17592_1 lane1_3600STDY6183968_TCTCAGTG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183969_CATGGGAA_L001_17592_1 lane1_3600STDY6183970_CCTAAGAT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183971_CTCAGATA_L001_17592_1 lane1_3600STDY6183972_CCCATAGG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183973_GCTATGAC_L001_17592_1 lane1_3600STDY6183974_GCTGTGAA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183975_ACCTTCAA_L001_17592_1 lane1_3600STDY6183976_ACAAAGCC_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183977_CAAAACCG_L001_17592_1 lane1_3600STDY6183978_GCTGGACA_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183979_AAGTCGTA_L001_17592_1 lane1_3600STDY6183980_CATCCGTA_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183981_TTGTGTCT_L001_17592_1 lane1_3600STDY6183982_TGCTCTAG_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183983_ACCCAACA_L001_17592_1 lane1_3600STDY6183984_CGATCTGA_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183985_GTTCCACG_L001_17592_1 lane1_3600STDY6183986_ACTCTTTC_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183987_TATTGGAG_L001_17592_1 lane1_3600STDY6183988_TAAACATA_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183989_GTAAGATA_L001_17592_1 lane1_3600STDY6183990_TACCGCAA_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6183991_TATCTCCT_L001_17592_1 lane1_3600STDY6183992_TGTCATCT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183993_ATAGCTCT_L001_17592_1 lane1_3600STDY6183994_AGTCCAAC_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183995_TTTGGGCA_L001_17592_1 lane1_3600STDY6183996_TCTGACGC_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183997_TGTCGACT_L001_17592_1 lane1_3600STDY6183998_GTCACGTA_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183999_TTGAGCGA_L001_17592_1 lane1_3600STDY6184000_GAGACATA_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6184001_GTCAAGCT_L001_17592_1 lane1_3600STDY6184002_AGCAAGTT_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6184003_GACGCTCA_L001_17592_1 lane1_3600STDY6184004_ACGGCAGC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184005_AGAACTGA_L001_17592_1 lane1_3600STDY6184006_CGCCTTTG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184007_TAAGGTCA_L001_17592_1 lane1_3600STDY6184008_ACGTTGGC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184009_CCAGCTTA_L001_17592_1 lane1_3600STDY6184010_GAATCCTA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184011_ACTTCGTA_L001_17592_1 lane1_3600STDY6184012_TAGTCGGT_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6184013_CGCACGAG_L001_17592_1 lane1_3600STDY6184014_ACGTACTA_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184015_AGCGCCAA_L001_17592_1 lane1_3600STDY6184016_GCCTGCCC_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184017_AGGACGAT_L001_17592_1 lane1_3600STDY6184018_CTTGACCG_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184019_AGGTCTAA_L001_17592_1 lane1_3600STDY6184020_CGAGATCC_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184021_ATTAGCGG_L001_17592_1 lane1_3600STDY6184022_GCGCTGAT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184023_TGCTGAAC_L001_17592_1 lane1_3600STDY6184024_GAGGGCAG_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6184025_GTTTTCAC_L001_17592_1 lane1_3600STDY6184026_GAGATGCC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184027_TTGAGAAG_L001_17592_1 lane1_3600STDY6184028_GCATCCGG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184029_GTCACCAG_L001_17592_1 lane1_3600STDY6184030_GAGGTCGC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184031_AAGGGGTA_L001_17592_1 lane1_3600STDY6184032_TTTTACGT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184033_TTCCTACA_L001_17592_1 lane1_3600STDY6184034_AGTGTAGT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184035_GTGGCCAA_L001_17592_1 lane1_3600STDY6184036_AAATACTC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184037_CACCCGTC_L001_17592_1 lane1_3600STDY6184038_TCGTGGTT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184039_ACTTGGGG_L001_17592_1 lane1_3600STDY6184040_GGCTGCTT_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184041_CAGGGTCG_L001_17592_1 lane1_3600STDY6184042_CTCGTCGA_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184043_TCTACAGT_L001_17592_1 lane1_3600STDY6184044_CTTCTAGA_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184045_AACGGCTT_L001_17592_1 lane1_3600STDY6184046_ATAAGACT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184047_GTTTTTCG_L001_17592_1 lane1_3600STDY6184048_ATTGGTAT_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6184049_CGCCAGTA_L001_17592_1 lane1_3600STDY6184050_AAGCCGAA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184051_TGACCCAC_L001_17592_1 lane1_3600STDY6184052_ATTGCACA_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6184053_CTTTTGAT_L001_17592_1 lane1_3600STDY6184054_TAGCGAGA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184055_TTCGCAGG_L001_17592_1 lane1_3600STDY6184056_TAGTTATT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184057_TCCTCCGA_L001_17592_1 lane1_3600STDY6184058_GCGGGTCT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184059_GATTCTAT_L001_17592_1 lane1_3600STDY6184060_ATGCAAAG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184061_GTCTGAGG_L001_17592_1 lane1_3600STDY6184062_TCTGGCGA_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184063_AATTTGCG_L001_17592_1 lane1_3600STDY6184064_TGGGTTGG_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184065_AGTTGAAA_L001_17592_1 lane1_3600STDY6184066_GACCGGAA_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184067_GATCGAAC_L001_17592_1 lane1_3600STDY6184068_GTATAGGG_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184069_GGTAAGAG_L001_17592_1 lane1_3600STDY6184070_AGTCCGAT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184071_ATACAGGC_L001_17592_1 lane1_3600STDY6184072_TGAGACTC_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6184073_ACTCAGGA_L001_17592_1 lane1_3600STDY6184074_GTGTCTGA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184075_CTTGAATC_L001_17592_1 lane1_3600STDY6184076_CCGCATGA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184077_AAGTAACA_L001_17592_1 lane1_3600STDY6184078_GTGGTACT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184079_AGCTGTGC_L001_17592_1 lane1_3600STDY6184080_TTACCTTC_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6184081_TCCGGGTA_L001_17592_1 lane1_3600STDY6184082_CTACGTAA_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184083_TCGGACCG_L001_17592_1 lane1_3600STDY6184084_ATGCGTCG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184085_TTCTTAGC_L001_17592_1 lane1_3600STDY6184086_TGAGTAAG_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184087_AAGTGATA_L001_17592_1 lane1_3600STDY6184088_TCGATGCG_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184089_TATTCTGG_L001_17592_1 lane1_3600STDY6184090_AGCCGTGA_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184091_AAGCCTTC_L001_17592_1 lane1_3600STDY6184092_AGGTATCC_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184093_AGGATCTC_L001_17592_1 lane1_3600STDY6184094_CTGTTTGA_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184095_GGAATTTC_L001_17592_1 lane1_3600STDY6184096_TTGGAGCA_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6184097_AAGGTCTG_L001_17592_1 lane1_3600STDY6184098_AATTAGGC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184099_AATCGGGT_L001_17592_1 lane1_3600STDY6184100_AGGTAGAC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184101_CTTATTCC_L001_17592_1 lane1_3600STDY6184102_CAGGCTCT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184103_AAAGCACG_L001_17592_1 lane1_3600STDY6184104_GTATACAC_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184105_GGACATAT_L001_17592_1 lane1_3600STDY6184106_CGGTTGGG_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184107_GTCCGTGA_L001_17592_1 lane1_3600STDY6184108_GCCGAACC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184109_ACTTTACT_L001_17592_1 lane1_3600STDY6184110_GGGTCCAT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184111_ATAACTAG_L001_17592_1 lane1_3600STDY6184112_AATAGAGA_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184113_TCACCATT_L001_17592_1 lane1_3600STDY6184114_CGCCTGAT_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184115_GCGTGAAC_L001_17592_1 lane1_3600STDY6184116_TAAGGGTG_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184117_GGTGTCGA_L001_17592_1 lane1_3600STDY6184118_CCGTTAGG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184119_TGGCAAAA_L001_17592_1 lane1_3600STDY6184120_CCTACCCG_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6184121_AACAGCGC_L001_17592_1 lane1_3600STDY6184122_TATACATC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184123_AAGCGACT_L001_17592_1 lane1_3600STDY6184124_GAAGCGCA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184125_ACCTCTAC_L001_17592_1 lane1_3600STDY6184126_GATTGCGT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184127_GCTGGTTG_L001_17592_1 lane1_3600STDY6184128_ATCGTCCT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184129_GGACACGG_L001_17592_1 lane1_3600STDY6184130_CGCACCTA_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184131_CTTCGGCT_L001_17592_1 lane1_3600STDY6184132_CGAATCGA_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184133_TAACAACT_L001_17592_1 lane1_3600STDY6184134_AGCTCTTT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184135_TAATCCCT_L001_17592_1 lane1_3600STDY6184136_AGGACACT_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184137_TTACACTA_L001_17592_1 lane1_3600STDY6184138_AAACATCA_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184139_CCATAGCT_L001_17592_1 lane1_3600STDY6184140_GTTATGGC_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184141_ATCCCCTA_L001_17592_1 lane1_3600STDY6184142_CATACTAC_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6184143_CAATTGTT_L001_17592_1 lane1_3600STDY6184144_AAACCCGT_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184145_CAGATTTC_L001_17592_1 lane1_3600STDY6184146_GCGTAGGT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184147_GGCATTCG_L001_17592_1 lane1_3600STDY6184148_TGGGGCTT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184149_CTGACTAC_L001_17592_1 lane1_3600STDY6184150_AACTTTTA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184151_AGGGATTC_L001_17592_1 lane1_3600STDY6184152_CCGAGTAG_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6184153_GGGGACTA_L001_17592_1 lane1_3600STDY6184154_GGAGTTGA_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184155_AGCTCATC_L001_17592_1 lane1_3600STDY6184156_TAATCAAC_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184157_ACTGGTCG_L001_17592_1 lane1_3600STDY6184158_GACGATTG_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184159_AGCGATGA_L001_17592_1 lane1_3600STDY6184160_GAAGAGAT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184161_CGTATGCA_L001_17592_1 lane1_3600STDY6184162_CACGTGCG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184163_GCTTAAAC_L001_17592_1 lane1_3600STDY6184164_GTTCCGCA_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184165_GTATCGTC_L001_17592_1 lane1_3600STDY6184166_GTCCTCAC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184167_GTACGGAC_L001_17592_1 lane1_3600STDY6184168_CATTTTGC_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6184169_TCCTCTCT_L001_17592_1 lane1_3600STDY6184170_AGCAACGA_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184171_ACAGAAGA_L001_17592_1 lane1_3600STDY6184172_CGACCCTT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184173_CTGCCTAG_L001_17592_1 lane1_3600STDY6184174_GAGCGCAT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184175_AACTTATC_L001_17592_1 lane1_3600STDY6184176_CCGATGTA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184177_TTACTACC_L001_17592_1 lane1_3600STDY6184178_CAAGGAGC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184179_TGGTTGAC_L001_17592_1 lane1_3600STDY6184180_ACCTGCTG_L001_17592_1 
#>                                        "03"                                        "02"

show/hide code output

get_classes(res_rh, merge_node = merge_node_param(min_n_signatures = 13342))
#> lane1_3600STDY6077864_ATCACGTT_L001_15986_1 lane1_3600STDY6077865_CGATGTTT_L001_15986_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6077866_TTAGGCAT_L001_15986_1 lane1_3600STDY6077867_TGACCACT_L001_15986_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6077868_ACAGTGGT_L001_15986_1 lane1_3600STDY6077869_GCCAATGT_L001_15986_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6077870_CAGATCTG_L001_15986_1 lane1_3600STDY6077871_ACTTGATG_L001_15986_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6077872_GATCAGCG_L001_15986_1 lane1_3600STDY6077873_TAGCTTGT_L001_15986_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6077874_GGCTACAG_L001_15986_1 lane1_3600STDY6077875_CTTGTACT_L001_15986_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6077876_TGGTTGTT_L001_15986_1 lane1_3600STDY6077877_TCTCGGTT_L001_15986_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6077878_TAAGCGTT_L001_15986_1 lane1_3600STDY6077879_TCCGTCTT_L001_15986_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6077880_TGTACCTT_L001_15986_1 lane1_3600STDY6077881_TTCTGTGT_L001_15986_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6077882_TCTGCTGT_L001_15986_1 lane1_3600STDY6077883_TTGGAGGT_L001_15986_1 
#>                                        "01"                                        "02" 
#> lane1_3600STDY6077884_TCGAGCGT_L001_15986_1 lane1_3600STDY6077885_TGATACGT_L001_15986_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6077886_TGCATAGT_L001_15986_1 lane1_3600STDY6077887_TTGACTCT_L001_15986_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6077888_TGCGATCT_L001_15986_1 lane1_3600STDY6077889_TTCCTGCT_L001_15986_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6077890_TAGTGACT_L001_15986_1 lane1_3600STDY6077891_TACAGGAT_L001_15986_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6077892_TCCTCAAT_L001_15986_1 lane1_3600STDY6077893_TGTGGTTG_L001_15986_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6077894_TAGTCTTG_L001_15986_1 lane1_3600STDY6077895_TTCCATTG_L001_15986_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6077896_TCGAAGTG_L001_15986_1 lane1_3600STDY6077897_TAACGCTG_L001_15986_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6077898_TTGGTATG_L001_15986_1 lane1_3600STDY6077899_TGAACTGG_L001_15986_1 
#>                                        "01"                                        "02" 
#> lane1_3600STDY6077900_TACTTCGG_L001_15986_1 lane1_3600STDY6077901_TCTCACGG_L001_15986_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6077902_TCAGGAGG_L001_15986_1 lane1_3600STDY6077903_TAAGTTCG_L001_15986_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6077904_TCCAGTCG_L001_15986_1 lane1_3600STDY6077905_TGTATGCG_L001_15986_1 
#>                                        "02"                                        "01" 
#> lane1_3600STDY6077906_TCATTGAG_L001_15986_1 lane1_3600STDY6077907_TGGCTCAG_L001_15986_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6077908_TATGCCAG_L001_15986_1 lane1_3600STDY6077909_TCAGATTC_L001_15986_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6077910_TACTAGTC_L001_15986_1 lane1_3600STDY6077911_TTCAGCTC_L001_15986_1 
#>                                        "01"                                        "02" 
#> lane1_3600STDY6077912_TGTCTATC_L001_15986_1 lane1_3600STDY6077913_TATGTGGC_L001_15986_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6077914_TTACTCGC_L001_15986_1 lane1_3600STDY6077915_TCGTTAGC_L001_15986_1 
#>                                        "02"                                        "01" 
#> lane1_3600STDY6077916_TACCGAGC_L001_15986_1 lane1_3600STDY6077917_TGTTCTCC_L001_15986_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6077918_TTCGCACC_L001_15986_1 lane1_3600STDY6077919_TTGCGTAC_L001_15986_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6077920_TCTACGAC_L001_15986_1 lane1_3600STDY6077921_TGACAGAC_L001_15986_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6077922_TAGAACAC_L001_15986_1 lane1_3600STDY6077923_TCATCCTA_L001_15986_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6077924_TGCTGATA_L001_15986_1 lane1_3600STDY6077925_TAGACGGA_L001_15986_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6077926_TGTGAAGA_L001_15986_1 lane1_3600STDY6077927_TCTCTTCA_L001_15986_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6077928_TTGTTCCA_L001_15986_1 lane1_3600STDY6077929_TGAAGCCA_L001_15986_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6077930_TACCACCA_L001_15986_1 lane1_3600STDY6077931_TGCGTGAA_L001_15986_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6077932_GGTGAGTT_L001_15986_1 lane1_3600STDY6077933_GATCTCTT_L001_15986_1 
#>                                        "01"                                        "02" 
#> lane1_3600STDY6077934_GTGTCCTT_L001_15986_1 lane1_3600STDY6077935_GACGGATT_L001_15986_1 
#>                                        "02"                                        "01" 
#> lane1_3600STDY6077936_GCAACATT_L001_15986_1 lane1_3600STDY6077937_GGTCGTGT_L001_15986_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6077938_GAATCTGT_L001_15986_1 lane1_3600STDY6077939_GTACATCT_L001_15986_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6077940_GAGGTGCT_L001_15986_1 lane1_3600STDY6077941_GCATGGCT_L001_15986_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6077942_GTTAGCCT_L001_15986_1 lane1_3600STDY6077943_GTCGCTAT_L001_15986_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6077944_GGAATGAT_L001_15986_1 lane1_3600STDY6077945_GAGCCAAT_L001_15986_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6077946_GCTCCTTG_L001_15986_1 lane1_3600STDY6077947_GTAAGGTG_L001_15986_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6077948_GAGGATGG_L001_15986_1 lane1_3600STDY6077949_GTTGTCGG_L001_15986_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6077950_GGATTAGG_L001_15986_1 lane1_3600STDY6077951_GATAGAGG_L001_15986_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6077952_GTGTGTCG_L001_15986_1 lane1_3600STDY6077953_GCAATCCG_L001_15986_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6077954_GACCTTAG_L001_15986_1 lane1_3600STDY6077955_GCCTGTTC_L001_15986_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6077956_GCACTGTC_L001_15986_1 lane1_3600STDY6077957_GCTAACTC_L001_15986_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6077958_GATTCATC_L001_15986_1 lane1_3600STDY6077959_GTCTTGGC_L001_15986_1 
#>                                        "01"                                        "01" 
#> lane3_3600STDY6077960_ATCACGTT_L003_15987_1 lane3_3600STDY6077961_CGATGTTT_L003_15987_1 
#>                                        "02"                                        "02" 
#> lane3_3600STDY6077962_TTAGGCAT_L003_15987_1 lane3_3600STDY6077963_TGACCACT_L003_15987_1 
#>                                        "01"                                        "01" 
#> lane3_3600STDY6077964_ACAGTGGT_L003_15987_1 lane3_3600STDY6077965_GCCAATGT_L003_15987_1 
#>                                        "01"                                        "01" 
#> lane3_3600STDY6077966_CAGATCTG_L003_15987_1 lane3_3600STDY6077967_ACTTGATG_L003_15987_1 
#>                                        "01"                                        "01" 
#> lane3_3600STDY6077968_GATCAGCG_L003_15987_1 lane3_3600STDY6077969_TAGCTTGT_L003_15987_1 
#>                                        "01"                                        "01" 
#> lane3_3600STDY6077970_GGCTACAG_L003_15987_1 lane3_3600STDY6077971_CTTGTACT_L003_15987_1 
#>                                        "01"                                        "01" 
#> lane3_3600STDY6077972_TGGTTGTT_L003_15987_1 lane3_3600STDY6077973_TCTCGGTT_L003_15987_1 
#>                                        "01"                                        "01" 
#> lane3_3600STDY6077974_TAAGCGTT_L003_15987_1 lane3_3600STDY6077975_TCCGTCTT_L003_15987_1 
#>                                        "01"                                        "01" 
#> lane3_3600STDY6077976_TGTACCTT_L003_15987_1 lane3_3600STDY6077977_TTCTGTGT_L003_15987_1 
#>                                        "01"                                        "01" 
#> lane3_3600STDY6077978_TCTGCTGT_L003_15987_1 lane3_3600STDY6077979_TTGGAGGT_L003_15987_1 
#>                                        "02"                                        "01" 
#> lane3_3600STDY6077980_TCGAGCGT_L003_15987_1 lane3_3600STDY6077981_TGATACGT_L003_15987_1 
#>                                        "01"                                        "01" 
#> lane3_3600STDY6077982_TGCATAGT_L003_15987_1 lane3_3600STDY6077983_TTGACTCT_L003_15987_1 
#>                                        "01"                                        "01" 
#> lane3_3600STDY6077984_TGCGATCT_L003_15987_1 lane3_3600STDY6077985_TTCCTGCT_L003_15987_1 
#>                                        "01"                                        "01" 
#> lane3_3600STDY6077986_TAGTGACT_L003_15987_1 lane3_3600STDY6077987_TACAGGAT_L003_15987_1 
#>                                        "01"                                        "01" 
#> lane3_3600STDY6077988_TCCTCAAT_L003_15987_1 lane3_3600STDY6077989_TGTGGTTG_L003_15987_1 
#>                                        "01"                                        "01" 
#> lane3_3600STDY6077990_TAGTCTTG_L003_15987_1 lane3_3600STDY6077991_TTCCATTG_L003_15987_1 
#>                                        "01"                                        "01" 
#> lane3_3600STDY6077992_TCGAAGTG_L003_15987_1 lane3_3600STDY6077993_TAACGCTG_L003_15987_1 
#>                                        "01"                                        "01" 
#> lane3_3600STDY6077994_TTGGTATG_L003_15987_1 lane3_3600STDY6077995_TGAACTGG_L003_15987_1 
#>                                        "01"                                        "01" 
#> lane3_3600STDY6077996_TACTTCGG_L003_15987_1 lane3_3600STDY6077997_TCTCACGG_L003_15987_1 
#>                                        "01"                                        "02" 
#> lane3_3600STDY6077998_TCAGGAGG_L003_15987_1 lane3_3600STDY6077999_TAAGTTCG_L003_15987_1 
#>                                        "01"                                        "01" 
#> lane3_3600STDY6078000_TCCAGTCG_L003_15987_1 lane3_3600STDY6078001_TGTATGCG_L003_15987_1 
#>                                        "01"                                        "02" 
#> lane3_3600STDY6078002_TCATTGAG_L003_15987_1 lane3_3600STDY6078003_TGGCTCAG_L003_15987_1 
#>                                        "03"                                        "01" 
#> lane3_3600STDY6078004_TATGCCAG_L003_15987_1 lane3_3600STDY6078005_TCAGATTC_L003_15987_1 
#>                                        "01"                                        "01" 
#> lane3_3600STDY6078006_TACTAGTC_L003_15987_1 lane3_3600STDY6078007_TTCAGCTC_L003_15987_1 
#>                                        "01"                                        "01" 
#> lane3_3600STDY6078008_TGTCTATC_L003_15987_1 lane3_3600STDY6078009_TATGTGGC_L003_15987_1 
#>                                        "01"                                        "01" 
#> lane3_3600STDY6078010_TTACTCGC_L003_15987_1 lane3_3600STDY6078011_TCGTTAGC_L003_15987_1 
#>                                        "01"                                        "01" 
#> lane3_3600STDY6078012_TACCGAGC_L003_15987_1 lane3_3600STDY6078013_TGTTCTCC_L003_15987_1 
#>                                        "01"                                        "01" 
#> lane3_3600STDY6078014_TTCGCACC_L003_15987_1 lane3_3600STDY6078015_TTGCGTAC_L003_15987_1 
#>                                        "01"                                        "01" 
#> lane3_3600STDY6078016_TCTACGAC_L003_15987_1 lane3_3600STDY6078017_TGACAGAC_L003_15987_1 
#>                                        "01"                                        "01" 
#> lane3_3600STDY6078018_TAGAACAC_L003_15987_1 lane3_3600STDY6078019_TCATCCTA_L003_15987_1 
#>                                        "01"                                        "01" 
#> lane3_3600STDY6078020_TGCTGATA_L003_15987_1 lane3_3600STDY6078021_TAGACGGA_L003_15987_1 
#>                                        "01"                                        "01" 
#> lane3_3600STDY6078022_TGTGAAGA_L003_15987_1 lane3_3600STDY6078023_TCTCTTCA_L003_15987_1 
#>                                        "01"                                        "01" 
#> lane3_3600STDY6078024_TTGTTCCA_L003_15987_1 lane3_3600STDY6078025_TGAAGCCA_L003_15987_1 
#>                                        "01"                                        "01" 
#> lane3_3600STDY6078026_TACCACCA_L003_15987_1 lane3_3600STDY6078027_TGCGTGAA_L003_15987_1 
#>                                        "01"                                        "02" 
#> lane3_3600STDY6078028_GGTGAGTT_L003_15987_1 lane3_3600STDY6078029_GATCTCTT_L003_15987_1 
#>                                        "01"                                        "01" 
#> lane3_3600STDY6078030_GTGTCCTT_L003_15987_1 lane3_3600STDY6078031_GACGGATT_L003_15987_1 
#>                                        "01"                                        "01" 
#> lane3_3600STDY6078032_GCAACATT_L003_15987_1 lane3_3600STDY6078033_GGTCGTGT_L003_15987_1 
#>                                        "01"                                        "01" 
#> lane3_3600STDY6078034_GAATCTGT_L003_15987_1 lane3_3600STDY6078035_GTACATCT_L003_15987_1 
#>                                        "01"                                        "01" 
#> lane3_3600STDY6078036_GAGGTGCT_L003_15987_1 lane3_3600STDY6078037_GCATGGCT_L003_15987_1 
#>                                        "01"                                        "01" 
#> lane3_3600STDY6078038_GTTAGCCT_L003_15987_1 lane3_3600STDY6078039_GTCGCTAT_L003_15987_1 
#>                                        "01"                                        "01" 
#> lane3_3600STDY6078040_GGAATGAT_L003_15987_1 lane3_3600STDY6078041_GAGCCAAT_L003_15987_1 
#>                                        "01"                                        "01" 
#> lane3_3600STDY6078042_GCTCCTTG_L003_15987_1 lane3_3600STDY6078043_GTAAGGTG_L003_15987_1 
#>                                        "01"                                        "01" 
#> lane3_3600STDY6078044_GAGGATGG_L003_15987_1 lane3_3600STDY6078045_GTTGTCGG_L003_15987_1 
#>                                        "01"                                        "01" 
#> lane3_3600STDY6078046_GGATTAGG_L003_15987_1 lane3_3600STDY6078047_GATAGAGG_L003_15987_1 
#>                                        "01"                                        "01" 
#> lane3_3600STDY6078048_GTGTGTCG_L003_15987_1 lane3_3600STDY6078049_GCAATCCG_L003_15987_1 
#>                                        "01"                                        "01" 
#> lane3_3600STDY6078050_GACCTTAG_L003_15987_1 lane3_3600STDY6078051_GCCTGTTC_L003_15987_1 
#>                                        "01"                                        "01" 
#> lane3_3600STDY6078052_GCACTGTC_L003_15987_1 lane3_3600STDY6078053_GCTAACTC_L003_15987_1 
#>                                        "01"                                        "01" 
#> lane3_3600STDY6078054_GATTCATC_L003_15987_1 lane3_3600STDY6078055_GTCTTGGC_L003_15987_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167693_ATCACGTT_L001_17236_1 lane1_3600STDY6167694_CGATGTTT_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167695_TTAGGCAT_L001_17236_1 lane1_3600STDY6167696_TGACCACT_L001_17236_1 
#>                                        "03"                                        "01" 
#> lane1_3600STDY6167697_ACAGTGGT_L001_17236_1 lane1_3600STDY6167698_GCCAATGT_L001_17236_1 
#>                                        "02"                                        "01" 
#> lane1_3600STDY6167699_CAGATCTG_L001_17236_1 lane1_3600STDY6167700_ACTTGATG_L001_17236_1 
#>                                        "01"                                        "02" 
#> lane1_3600STDY6167701_GATCAGCG_L001_17236_1 lane1_3600STDY6167702_TAGCTTGT_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167703_GGCTACAG_L001_17236_1 lane1_3600STDY6167704_CTTGTACT_L001_17236_1 
#>                                        "01"                                        "03" 
#> lane1_3600STDY6167705_TGGTTGTT_L001_17236_1 lane1_3600STDY6167706_TCTCGGTT_L001_17236_1 
#>                                        "01"                                        "02" 
#> lane1_3600STDY6167707_TAAGCGTT_L001_17236_1 lane1_3600STDY6167708_TCCGTCTT_L001_17236_1 
#>                                        "02"                                        "01" 
#> lane1_3600STDY6167709_TGTACCTT_L001_17236_1 lane1_3600STDY6167710_TTCTGTGT_L001_17236_1 
#>                                        "01"                                        "02" 
#> lane1_3600STDY6167711_TCTGCTGT_L001_17236_1 lane1_3600STDY6167712_TTGGAGGT_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167713_TCGAGCGT_L001_17236_1 lane1_3600STDY6167714_TGATACGT_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167715_TGCATAGT_L001_17236_1 lane1_3600STDY6167716_TTGACTCT_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167717_TGCGATCT_L001_17236_1 lane1_3600STDY6167718_TTCCTGCT_L001_17236_1 
#>                                        "01"                                        "02" 
#> lane1_3600STDY6167719_TAGTGACT_L001_17236_1 lane1_3600STDY6167720_TACAGGAT_L001_17236_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6167721_TCCTCAAT_L001_17236_1 lane1_3600STDY6167722_TGTGGTTG_L001_17236_1 
#>                                        "03"                                        "01" 
#> lane1_3600STDY6167723_TAGTCTTG_L001_17236_1 lane1_3600STDY6167724_TTCCATTG_L001_17236_1 
#>                                        "01"                                        "02" 
#> lane1_3600STDY6167725_TCGAAGTG_L001_17236_1 lane1_3600STDY6167726_TAACGCTG_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167727_TTGGTATG_L001_17236_1 lane1_3600STDY6167728_TGAACTGG_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167729_TACTTCGG_L001_17236_1 lane1_3600STDY6167730_TCTCACGG_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167731_TCAGGAGG_L001_17236_1 lane1_3600STDY6167732_TAAGTTCG_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167733_TCCAGTCG_L001_17236_1 lane1_3600STDY6167734_TGTATGCG_L001_17236_1 
#>                                        "01"                                        "02" 
#> lane1_3600STDY6167735_TCATTGAG_L001_17236_1 lane1_3600STDY6167736_TGGCTCAG_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167737_TATGCCAG_L001_17236_1 lane1_3600STDY6167738_TCAGATTC_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167739_TACTAGTC_L001_17236_1 lane1_3600STDY6167740_TTCAGCTC_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167741_TGTCTATC_L001_17236_1 lane1_3600STDY6167742_TATGTGGC_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167743_TTACTCGC_L001_17236_1 lane1_3600STDY6167744_TCGTTAGC_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167745_TACCGAGC_L001_17236_1 lane1_3600STDY6167746_TGTTCTCC_L001_17236_1 
#>                                        "03"                                        "01" 
#> lane1_3600STDY6167747_TTCGCACC_L001_17236_1 lane1_3600STDY6167748_TTGCGTAC_L001_17236_1 
#>                                        "03"                                        "01" 
#> lane1_3600STDY6167749_TCTACGAC_L001_17236_1 lane1_3600STDY6167750_TGACAGAC_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167751_TAGAACAC_L001_17236_1 lane1_3600STDY6167752_TCATCCTA_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167753_TGCTGATA_L001_17236_1 lane1_3600STDY6167754_TAGACGGA_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167755_TGTGAAGA_L001_17236_1 lane1_3600STDY6167756_TCTCTTCA_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167757_TTGTTCCA_L001_17236_1 lane1_3600STDY6167758_TGAAGCCA_L001_17236_1 
#>                                        "01"                                        "02" 
#> lane1_3600STDY6167759_TACCACCA_L001_17236_1 lane1_3600STDY6167760_TGCGTGAA_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167761_GGTGAGTT_L001_17236_1 lane1_3600STDY6167762_GATCTCTT_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167763_GTGTCCTT_L001_17236_1 lane1_3600STDY6167764_GACGGATT_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167765_GCAACATT_L001_17236_1 lane1_3600STDY6167766_GGTCGTGT_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167767_GAATCTGT_L001_17236_1 lane1_3600STDY6167768_GTACATCT_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167769_GAGGTGCT_L001_17236_1 lane1_3600STDY6167770_GCATGGCT_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167771_GTTAGCCT_L001_17236_1 lane1_3600STDY6167772_GTCGCTAT_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167773_GGAATGAT_L001_17236_1 lane1_3600STDY6167774_GAGCCAAT_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167775_GCTCCTTG_L001_17236_1 lane1_3600STDY6167776_GTAAGGTG_L001_17236_1 
#>                                        "01"                                        "02" 
#> lane1_3600STDY6167777_GAGGATGG_L001_17236_1 lane1_3600STDY6167778_GTTGTCGG_L001_17236_1 
#>                                        "01"                                        "02" 
#> lane1_3600STDY6167779_GGATTAGG_L001_17236_1 lane1_3600STDY6167780_GATAGAGG_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167781_GTGTGTCG_L001_17236_1 lane1_3600STDY6167782_GCAATCCG_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167783_GACCTTAG_L001_17236_1 lane1_3600STDY6167784_GCCTGTTC_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167785_GCACTGTC_L001_17236_1 lane1_3600STDY6167786_GCTAACTC_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167787_GATTCATC_L001_17236_1 lane1_3600STDY6167788_GTCTTGGC_L001_17236_1 
#>                                        "01"                                        "02" 
#> lane1_3600STDY6167789_GTAGAAGC_L001_17236_1 lane1_3600STDY6167790_GATGGTCC_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167791_GTGCTACC_L001_17236_1 lane1_3600STDY6167792_GCGATTAC_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167793_GGTTGGAC_L001_17236_1 lane1_3600STDY6167794_GGCACAAC_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167795_GACACTTA_L001_17236_1 lane1_3600STDY6167796_GTGCAGTA_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167797_GGAGTCTA_L001_17236_1 lane1_3600STDY6167798_GCTATGGA_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167799_GAGTGCGA_L001_17236_1 lane1_3600STDY6167800_GTAACCGA_L001_17236_1 
#>                                        "03"                                        "01" 
#> lane1_3600STDY6167801_GGCAAGCA_L001_17236_1 lane1_3600STDY6167802_GCCTTACA_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167803_GAACGACA_L001_17236_1 lane1_3600STDY6167804_GCAGGTAA_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167805_GCGTCGAA_L001_17236_1 lane1_3600STDY6167806_CGTTCGGT_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167807_CACCAGGT_L001_17236_1 lane1_3600STDY6167808_CTGCGAGT_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167809_CCGTATCT_L001_17236_1 lane1_3600STDY6167810_CGCTTCCT_L001_17236_1 
#>                                        "01"                                        "02" 
#> lane1_3600STDY6167811_CAAGACCT_L001_17236_1 lane1_3600STDY6167812_CACACACT_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167813_CCTAGTAT_L001_17236_1 lane1_3600STDY6167814_CCACCGAT_L001_17236_1 
#>                                        "02"                                        "01" 
#> lane1_3600STDY6167815_CTTCACAT_L001_17236_1 lane1_3600STDY6167816_CTATCATG_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167817_CATGAATG_L001_17236_1 lane1_3600STDY6167818_CCACTTGG_L001_17236_1 
#>                                        "03"                                        "01" 
#> lane1_3600STDY6167819_CTGTACGG_L001_17236_1 lane1_3600STDY6167820_CTAGATAG_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167821_CACTCGAG_L001_17236_1 lane1_3600STDY6167822_CCGACAAG_L001_17236_1 
#>                                        "03"                                        "01" 
#> lane1_3600STDY6167823_CTTGCTTC_L001_17236_1 lane1_3600STDY6167824_CATAGGTC_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167825_CACATTGC_L001_17236_1 lane1_3600STDY6167826_CGCTAAGC_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167827_CAACCTCC_L001_17236_1 lane1_3600STDY6167828_CAGCTGAC_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167829_CTCAAGAC_L001_17236_1 lane1_3600STDY6167830_CGTGTCAC_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167831_CCATGCAC_L001_17236_1 lane1_3600STDY6167832_CGTTACTA_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167833_CAAGTAGA_L001_17236_1 lane1_3600STDY6167834_CTCTCTCA_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167835_CGACTGCA_L001_17236_1 lane1_3600STDY6167836_CCTGAGCA_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167837_CAGGCTAA_L001_17236_1 lane1_3600STDY6167838_CGGAGGAA_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167839_AGGAGATT_L001_17236_1 lane1_3600STDY6167840_AGGCAGCT_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167841_ACGTTCAT_L001_17236_1 lane1_3600STDY6167842_AACGTGTG_L001_17236_1 
#>                                        "03"                                        "01" 
#> lane1_3600STDY6167843_AGACCGTG_L001_17236_1 lane1_3600STDY6167844_ACCTCTGG_L001_17236_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6167845_ATCCTAGG_L001_17236_1 lane1_3600STDY6167846_ATCAACCG_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167847_AGGTCACG_L001_17236_1 lane1_3600STDY6167848_ACTGTTAG_L001_17236_1 
#>                                        "02"                                        "01" 
#> lane1_3600STDY6167849_AAGAGTAG_L001_17236_1 lane1_3600STDY6167850_ATTCGGAG_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167851_ACGCAATC_L001_17236_1 lane1_3600STDY6167852_ACAAGTGC_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167853_ATGGATCC_L001_17236_1 lane1_3600STDY6167854_AGAGGACC_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167855_ATCTCCAC_L001_17236_1 lane1_3600STDY6167856_ATTGGCTA_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167857_AATCCTGA_L001_17236_1 lane1_3600STDY6167858_AGGATTCA_L001_17236_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6167859_AACTGGCA_L001_17236_1 lane1_3600STDY6167860_ACAACGCA_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167861_CGGAAACA_L001_17236_1 lane1_3600STDY6167862_AATGAATT_L001_17236_1 
#>                                        "02"                                        "01" 
#> lane1_3600STDY6167863_TAGGACCC_L001_17236_1 lane1_3600STDY6167864_TCTCAGTG_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167865_CATGGGAA_L001_17236_1 lane1_3600STDY6167866_CCTAAGAT_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167867_CTCAGATA_L001_17236_1 lane1_3600STDY6167868_CCCATAGG_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167869_GCTATGAC_L001_17236_1 lane1_3600STDY6167870_GCTGTGAA_L001_17236_1 
#>                                        "01"                                        "02" 
#> lane1_3600STDY6167871_ACCTTCAA_L001_17236_1 lane1_3600STDY6167872_ACAAAGCC_L001_17236_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6167873_CAAAACCG_L001_17236_1 lane1_3600STDY6167874_GCTGGACA_L001_17236_1 
#>                                        "02"                                        "01" 
#> lane1_3600STDY6167875_AAGTCGTA_L001_17236_1 lane1_3600STDY6167876_CATCCGTA_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167877_TTGTGTCT_L001_17236_1 lane1_3600STDY6167878_TGCTCTAG_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167879_ACCCAACA_L001_17236_1 lane1_3600STDY6167880_CGATCTGA_L001_17236_1 
#>                                        "02"                                        "01" 
#> lane1_3600STDY6167881_GTTCCACG_L001_17236_1 lane1_3600STDY6167882_ACTCTTTC_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167883_TATTGGAG_L001_17236_1 lane1_3600STDY6167884_TAAACATA_L001_17236_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6167885_GTAAGATA_L001_17236_1 lane1_3600STDY6167886_TACCGCAA_L001_17236_1 
#>                                        "03"                                        "01" 
#> lane1_3600STDY6167887_TATCTCCT_L001_17236_1 lane1_3600STDY6167888_TGTCATCT_L001_17236_1 
#>                                        "03"                                        "01" 
#> lane1_3600STDY6167889_ATAGCTCT_L001_17236_1 lane1_3600STDY6167890_AGTCCAAC_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167891_TTTGGGCA_L001_17236_1 lane1_3600STDY6167892_TCTGACGC_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167893_TGTCGACT_L001_17236_1 lane1_3600STDY6167894_GTCACGTA_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167895_TTGAGCGA_L001_17236_1 lane1_3600STDY6167896_GAGACATA_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167897_GTCAAGCT_L001_17236_1 lane1_3600STDY6167898_AGCAAGTT_L001_17236_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6167899_GACGCTCA_L001_17236_1 lane1_3600STDY6167900_ACGGCAGC_L001_17236_1 
#>                                        "01"                                        "03" 
#> lane1_3600STDY6167901_AGAACTGA_L001_17236_1 lane1_3600STDY6167902_CGCCTTTG_L001_17236_1 
#>                                        "03"                                        "01" 
#> lane1_3600STDY6167903_TAAGGTCA_L001_17236_1 lane1_3600STDY6167904_ACGTTGGC_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167905_CCAGCTTA_L001_17236_1 lane1_3600STDY6167906_GAATCCTA_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167907_ACTTCGTA_L001_17236_1 lane1_3600STDY6167908_TAGTCGGT_L001_17236_1 
#>                                        "01"                                        "02" 
#> lane1_3600STDY6167909_CGCACGAG_L001_17236_1 lane1_3600STDY6167910_ACGTACTA_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167911_AGCGCCAA_L001_17236_1 lane1_3600STDY6167912_GCCTGCCC_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167913_AGGACGAT_L001_17236_1 lane1_3600STDY6167914_CTTGACCG_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167915_AGGTCTAA_L001_17236_1 lane1_3600STDY6167916_CGAGATCC_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167917_ATTAGCGG_L001_17236_1 lane1_3600STDY6167918_GCGCTGAT_L001_17236_1 
#>                                        "01"                                        "02" 
#> lane1_3600STDY6167919_TGCTGAAC_L001_17236_1 lane1_3600STDY6167920_GAGGGCAG_L001_17236_1 
#>                                        "01"                                        "02" 
#> lane1_3600STDY6167921_GTTTTCAC_L001_17236_1 lane1_3600STDY6167922_GAGATGCC_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167923_TTGAGAAG_L001_17236_1 lane1_3600STDY6167924_GCATCCGG_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167925_GTCACCAG_L001_17236_1 lane1_3600STDY6167926_GAGGTCGC_L001_17236_1 
#>                                        "01"                                        "03" 
#> lane1_3600STDY6167927_AAGGGGTA_L001_17236_1 lane1_3600STDY6167928_TTTTACGT_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167929_TTCCTACA_L001_17236_1 lane1_3600STDY6167930_AGTGTAGT_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167931_GTGGCCAA_L001_17236_1 lane1_3600STDY6167932_AAATACTC_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167933_CACCCGTC_L001_17236_1 lane1_3600STDY6167934_TCGTGGTT_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167935_ACTTGGGG_L001_17236_1 lane1_3600STDY6167936_GGCTGCTT_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167937_CAGGGTCG_L001_17236_1 lane1_3600STDY6167938_CTCGTCGA_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167939_TCTACAGT_L001_17236_1 lane1_3600STDY6167940_CTTCTAGA_L001_17236_1 
#>                                        "01"                                        "03" 
#> lane1_3600STDY6167941_AACGGCTT_L001_17236_1 lane1_3600STDY6167942_ATAAGACT_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167943_GTTTTTCG_L001_17236_1 lane1_3600STDY6167944_ATTGGTAT_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167945_CGCCAGTA_L001_17236_1 lane1_3600STDY6167946_AAGCCGAA_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167947_TGACCCAC_L001_17236_1 lane1_3600STDY6167948_ATTGCACA_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167949_CTTTTGAT_L001_17236_1 lane1_3600STDY6167950_TAGCGAGA_L001_17236_1 
#>                                        "01"                                        "02" 
#> lane1_3600STDY6167951_TTCGCAGG_L001_17236_1 lane1_3600STDY6167952_TAGTTATT_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167953_TCCTCCGA_L001_17236_1 lane1_3600STDY6167954_GCGGGTCT_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167955_GATTCTAT_L001_17236_1 lane1_3600STDY6167956_ATGCAAAG_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167957_GTCTGAGG_L001_17236_1 lane1_3600STDY6167958_TCTGGCGA_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167959_AATTTGCG_L001_17236_1 lane1_3600STDY6167960_TGGGTTGG_L001_17236_1 
#>                                        "01"                                        "03" 
#> lane1_3600STDY6167961_AGTTGAAA_L001_17236_1 lane1_3600STDY6167962_GACCGGAA_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167963_GATCGAAC_L001_17236_1 lane1_3600STDY6167964_GTATAGGG_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167965_GGTAAGAG_L001_17236_1 lane1_3600STDY6167966_AGTCCGAT_L001_17236_1 
#>                                        "02"                                        "01" 
#> lane1_3600STDY6167967_ATACAGGC_L001_17236_1 lane1_3600STDY6167968_TGAGACTC_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167969_ACTCAGGA_L001_17236_1 lane1_3600STDY6167970_GTGTCTGA_L001_17236_1 
#>                                        "01"                                        "03" 
#> lane1_3600STDY6167971_CTTGAATC_L001_17236_1 lane1_3600STDY6167972_CCGCATGA_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167973_AAGTAACA_L001_17236_1 lane1_3600STDY6167974_GTGGTACT_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167975_AGCTGTGC_L001_17236_1 lane1_3600STDY6167976_TTACCTTC_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167977_TCCGGGTA_L001_17236_1 lane1_3600STDY6167978_CTACGTAA_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167979_TCGGACCG_L001_17236_1 lane1_3600STDY6167980_ATGCGTCG_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167981_TTCTTAGC_L001_17236_1 lane1_3600STDY6167982_TGAGTAAG_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167983_AAGTGATA_L001_17236_1 lane1_3600STDY6167984_TCGATGCG_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167985_TATTCTGG_L001_17236_1 lane1_3600STDY6167986_AGCCGTGA_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167987_AAGCCTTC_L001_17236_1 lane1_3600STDY6167988_AGGTATCC_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167989_AGGATCTC_L001_17236_1 lane1_3600STDY6167990_CTGTTTGA_L001_17236_1 
#>                                        "02"                                        "01" 
#> lane1_3600STDY6167991_GGAATTTC_L001_17236_1 lane1_3600STDY6167992_TTGGAGCA_L001_17236_1 
#>                                        "01"                                        "03" 
#> lane1_3600STDY6167993_AAGGTCTG_L001_17236_1 lane1_3600STDY6167994_AATTAGGC_L001_17236_1 
#>                                        "03"                                        "01" 
#> lane1_3600STDY6167995_AATCGGGT_L001_17236_1 lane1_3600STDY6167996_AGGTAGAC_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167997_CTTATTCC_L001_17236_1 lane1_3600STDY6167998_CAGGCTCT_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6167999_AAAGCACG_L001_17236_1 lane1_3600STDY6168000_GTATACAC_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6168001_GGACATAT_L001_17236_1 lane1_3600STDY6168002_CGGTTGGG_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6168003_GTCCGTGA_L001_17236_1 lane1_3600STDY6168004_GCCGAACC_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6168005_ACTTTACT_L001_17236_1 lane1_3600STDY6168006_GGGTCCAT_L001_17236_1 
#>                                        "03"                                        "01" 
#> lane1_3600STDY6168007_ATAACTAG_L001_17236_1 lane1_3600STDY6168008_AATAGAGA_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6168009_TCACCATT_L001_17236_1 lane1_3600STDY6168010_CGCCTGAT_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6168011_GCGTGAAC_L001_17236_1 lane1_3600STDY6168012_TAAGGGTG_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6168013_GGTGTCGA_L001_17236_1 lane1_3600STDY6168014_CCGTTAGG_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6168015_TGGCAAAA_L001_17236_1 lane1_3600STDY6168016_CCTACCCG_L001_17236_1 
#>                                        "01"                                        "02" 
#> lane1_3600STDY6168017_AACAGCGC_L001_17236_1 lane1_3600STDY6168018_TATACATC_L001_17236_1 
#>                                        "01"                                        "02" 
#> lane1_3600STDY6168019_AAGCGACT_L001_17236_1 lane1_3600STDY6168020_GAAGCGCA_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6168021_ACCTCTAC_L001_17236_1 lane1_3600STDY6168022_GATTGCGT_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6168023_GCTGGTTG_L001_17236_1 lane1_3600STDY6168024_ATCGTCCT_L001_17236_1 
#>                                        "02"                                        "01" 
#> lane1_3600STDY6168025_GGACACGG_L001_17236_1 lane1_3600STDY6168026_CGCACCTA_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6168027_CTTCGGCT_L001_17236_1 lane1_3600STDY6168028_CGAATCGA_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6168029_TAACAACT_L001_17236_1 lane1_3600STDY6168030_AGCTCTTT_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6168031_TAATCCCT_L001_17236_1 lane1_3600STDY6168032_AGGACACT_L001_17236_1 
#>                                        "01"                                        "03" 
#> lane1_3600STDY6168033_TTACACTA_L001_17236_1 lane1_3600STDY6168034_AAACATCA_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6168035_CCATAGCT_L001_17236_1 lane1_3600STDY6168036_GTTATGGC_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6168037_ATCCCCTA_L001_17236_1 lane1_3600STDY6168038_CATACTAC_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6168039_CAATTGTT_L001_17236_1 lane1_3600STDY6168040_AAACCCGT_L001_17236_1 
#>                                        "01"                                        "02" 
#> lane1_3600STDY6168041_CAGATTTC_L001_17236_1 lane1_3600STDY6168042_GCGTAGGT_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6168043_GGCATTCG_L001_17236_1 lane1_3600STDY6168044_TGGGGCTT_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6168045_CTGACTAC_L001_17236_1 lane1_3600STDY6168046_AACTTTTA_L001_17236_1 
#>                                        "01"                                        "03" 
#> lane1_3600STDY6168047_AGGGATTC_L001_17236_1 lane1_3600STDY6168048_CCGAGTAG_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6168049_GGGGACTA_L001_17236_1 lane1_3600STDY6168050_GGAGTTGA_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6168051_AGCTCATC_L001_17236_1 lane1_3600STDY6168052_TAATCAAC_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6168053_ACTGGTCG_L001_17236_1 lane1_3600STDY6168054_GACGATTG_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6168055_AGCGATGA_L001_17236_1 lane1_3600STDY6168056_GAAGAGAT_L001_17236_1 
#>                                        "01"                                        "03" 
#> lane1_3600STDY6168057_CGTATGCA_L001_17236_1 lane1_3600STDY6168058_CACGTGCG_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6168059_GCTTAAAC_L001_17236_1 lane1_3600STDY6168060_GTTCCGCA_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6168061_GTATCGTC_L001_17236_1 lane1_3600STDY6168062_GTCCTCAC_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6168063_GTACGGAC_L001_17236_1 lane1_3600STDY6168064_CATTTTGC_L001_17236_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6168065_TCCTCTCT_L001_17236_1 lane1_3600STDY6168066_AGCAACGA_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6168067_ACAGAAGA_L001_17236_1 lane1_3600STDY6168068_CGACCCTT_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6168069_CTGCCTAG_L001_17236_1 lane1_3600STDY6168070_GAGCGCAT_L001_17236_1 
#>                                        "02"                                        "01" 
#> lane1_3600STDY6168071_AACTTATC_L001_17236_1 lane1_3600STDY6168072_CCGATGTA_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6168073_TTACTACC_L001_17236_1 lane1_3600STDY6168074_CAAGGAGC_L001_17236_1 
#>                                        "01"                                        "01" 
#> lane1_3600STDY6168075_TGGTTGAC_L001_17236_1 lane1_3600STDY6168076_ACCTGCTG_L001_17236_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184181_ATCACGTT_L004_17480_1 lane4_3600STDY6184182_CGATGTTT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184183_TTAGGCAT_L004_17480_1 lane4_3600STDY6184184_TGACCACT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184185_ACAGTGGT_L004_17480_1 lane4_3600STDY6184186_GCCAATGT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184187_CAGATCTG_L004_17480_1 lane4_3600STDY6184188_ACTTGATG_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184189_GATCAGCG_L004_17480_1 lane4_3600STDY6184190_TAGCTTGT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184191_GGCTACAG_L004_17480_1 lane4_3600STDY6184192_CTTGTACT_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184193_TGGTTGTT_L004_17480_1 lane4_3600STDY6184194_TCTCGGTT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184195_TAAGCGTT_L004_17480_1 lane4_3600STDY6184196_TCCGTCTT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184197_TGTACCTT_L004_17480_1 lane4_3600STDY6184198_TTCTGTGT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184199_TCTGCTGT_L004_17480_1 lane4_3600STDY6184200_TTGGAGGT_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184201_TCGAGCGT_L004_17480_1 lane4_3600STDY6184202_TGATACGT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184203_TGCATAGT_L004_17480_1 lane4_3600STDY6184204_TTGACTCT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184205_TGCGATCT_L004_17480_1 lane4_3600STDY6184206_TTCCTGCT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184207_TAGTGACT_L004_17480_1 lane4_3600STDY6184208_TACAGGAT_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184209_TCCTCAAT_L004_17480_1 lane4_3600STDY6184210_TGTGGTTG_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184211_TAGTCTTG_L004_17480_1 lane4_3600STDY6184212_TTCCATTG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184213_TCGAAGTG_L004_17480_1 lane4_3600STDY6184214_TAACGCTG_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184215_TTGGTATG_L004_17480_1 lane4_3600STDY6184216_TGAACTGG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184217_TACTTCGG_L004_17480_1 lane4_3600STDY6184218_TCTCACGG_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184219_TCAGGAGG_L004_17480_1 lane4_3600STDY6184220_TAAGTTCG_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184221_TCCAGTCG_L004_17480_1 lane4_3600STDY6184222_TGTATGCG_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184223_TCATTGAG_L004_17480_1 lane4_3600STDY6184224_TGGCTCAG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184225_TATGCCAG_L004_17480_1 lane4_3600STDY6184226_TCAGATTC_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184227_TACTAGTC_L004_17480_1 lane4_3600STDY6184228_TTCAGCTC_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184229_TGTCTATC_L004_17480_1 lane4_3600STDY6184230_TATGTGGC_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184231_TTACTCGC_L004_17480_1 lane4_3600STDY6184232_TCGTTAGC_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184233_TACCGAGC_L004_17480_1 lane4_3600STDY6184234_TGTTCTCC_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184235_TTCGCACC_L004_17480_1 lane4_3600STDY6184236_TTGCGTAC_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184237_TCTACGAC_L004_17480_1 lane4_3600STDY6184238_TGACAGAC_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184239_TAGAACAC_L004_17480_1 lane4_3600STDY6184240_TCATCCTA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184241_TGCTGATA_L004_17480_1 lane4_3600STDY6184242_TAGACGGA_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184243_TGTGAAGA_L004_17480_1 lane4_3600STDY6184244_TCTCTTCA_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184245_TTGTTCCA_L004_17480_1 lane4_3600STDY6184246_TGAAGCCA_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184247_TACCACCA_L004_17480_1 lane4_3600STDY6184248_TGCGTGAA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184249_GGTGAGTT_L004_17480_1 lane4_3600STDY6184250_GATCTCTT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184251_GTGTCCTT_L004_17480_1 lane4_3600STDY6184252_GACGGATT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184253_GCAACATT_L004_17480_1 lane4_3600STDY6184254_GGTCGTGT_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184255_GAATCTGT_L004_17480_1 lane4_3600STDY6184256_GTACATCT_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184257_GAGGTGCT_L004_17480_1 lane4_3600STDY6184258_GCATGGCT_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184259_GTTAGCCT_L004_17480_1 lane4_3600STDY6184260_GTCGCTAT_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184261_GGAATGAT_L004_17480_1 lane4_3600STDY6184262_GAGCCAAT_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184263_GCTCCTTG_L004_17480_1 lane4_3600STDY6184264_GTAAGGTG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184265_GAGGATGG_L004_17480_1 lane4_3600STDY6184266_GTTGTCGG_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184267_GGATTAGG_L004_17480_1 lane4_3600STDY6184268_GATAGAGG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184269_GTGTGTCG_L004_17480_1 lane4_3600STDY6184270_GCAATCCG_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184271_GACCTTAG_L004_17480_1 lane4_3600STDY6184272_GCCTGTTC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184273_GCACTGTC_L004_17480_1 lane4_3600STDY6184274_GCTAACTC_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184275_GATTCATC_L004_17480_1 lane4_3600STDY6184276_GTCTTGGC_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184277_GTAGAAGC_L004_17480_1 lane4_3600STDY6184278_GATGGTCC_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184279_GTGCTACC_L004_17480_1 lane4_3600STDY6184280_GCGATTAC_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184281_GGTTGGAC_L004_17480_1 lane4_3600STDY6184282_GGCACAAC_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184283_GACACTTA_L004_17480_1 lane4_3600STDY6184284_GTGCAGTA_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184285_GGAGTCTA_L004_17480_1 lane4_3600STDY6184286_GCTATGGA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184287_GAGTGCGA_L004_17480_1 lane4_3600STDY6184288_GTAACCGA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184289_GGCAAGCA_L004_17480_1 lane4_3600STDY6184290_GCCTTACA_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184291_GAACGACA_L004_17480_1 lane4_3600STDY6184292_GCAGGTAA_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184293_GCGTCGAA_L004_17480_1 lane4_3600STDY6184294_CGTTCGGT_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184295_CACCAGGT_L004_17480_1 lane4_3600STDY6184296_CTGCGAGT_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184297_CCGTATCT_L004_17480_1 lane4_3600STDY6184298_CGCTTCCT_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184299_CAAGACCT_L004_17480_1 lane4_3600STDY6184300_CACACACT_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184301_CCTAGTAT_L004_17480_1 lane4_3600STDY6184302_CCACCGAT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184303_CTTCACAT_L004_17480_1 lane4_3600STDY6184304_CTATCATG_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184305_CATGAATG_L004_17480_1 lane4_3600STDY6184306_CCACTTGG_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184307_CTGTACGG_L004_17480_1 lane4_3600STDY6184308_CTAGATAG_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184309_CACTCGAG_L004_17480_1 lane4_3600STDY6184310_CCGACAAG_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184311_CTTGCTTC_L004_17480_1 lane4_3600STDY6184312_CATAGGTC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184313_CACATTGC_L004_17480_1 lane4_3600STDY6184314_CGCTAAGC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184315_CAACCTCC_L004_17480_1 lane4_3600STDY6184316_CAGCTGAC_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184317_CTCAAGAC_L004_17480_1 lane4_3600STDY6184318_CGTGTCAC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184319_CCATGCAC_L004_17480_1 lane4_3600STDY6184320_CGTTACTA_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184321_CAAGTAGA_L004_17480_1 lane4_3600STDY6184322_CTCTCTCA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184323_CGACTGCA_L004_17480_1 lane4_3600STDY6184324_CCTGAGCA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184325_CAGGCTAA_L004_17480_1 lane4_3600STDY6184326_CGGAGGAA_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184327_AGGAGATT_L004_17480_1 lane4_3600STDY6184328_AGGCAGCT_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184329_ACGTTCAT_L004_17480_1 lane4_3600STDY6184330_AACGTGTG_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184331_AGACCGTG_L004_17480_1 lane4_3600STDY6184332_ACCTCTGG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184333_ATCCTAGG_L004_17480_1 lane4_3600STDY6184334_ATCAACCG_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184335_AGGTCACG_L004_17480_1 lane4_3600STDY6184336_ACTGTTAG_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184337_AAGAGTAG_L004_17480_1 lane4_3600STDY6184338_ATTCGGAG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184339_ACGCAATC_L004_17480_1 lane4_3600STDY6184340_ACAAGTGC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184341_ATGGATCC_L004_17480_1 lane4_3600STDY6184342_AGAGGACC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184343_ATCTCCAC_L004_17480_1 lane4_3600STDY6184344_ATTGGCTA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184345_AATCCTGA_L004_17480_1 lane4_3600STDY6184346_AGGATTCA_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184347_AACTGGCA_L004_17480_1 lane4_3600STDY6184348_ACAACGCA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184349_CGGAAACA_L004_17480_1 lane4_3600STDY6184350_AATGAATT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184351_TAGGACCC_L004_17480_1 lane4_3600STDY6184352_TCTCAGTG_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184353_CATGGGAA_L004_17480_1 lane4_3600STDY6184354_CCTAAGAT_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184355_CTCAGATA_L004_17480_1 lane4_3600STDY6184356_CCCATAGG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184357_GCTATGAC_L004_17480_1 lane4_3600STDY6184358_GCTGTGAA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184359_ACCTTCAA_L004_17480_1 lane4_3600STDY6184360_ACAAAGCC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184361_CAAAACCG_L004_17480_1 lane4_3600STDY6184362_GCTGGACA_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184363_AAGTCGTA_L004_17480_1 lane4_3600STDY6184364_CATCCGTA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184365_TTGTGTCT_L004_17480_1 lane4_3600STDY6184366_TGCTCTAG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184367_ACCCAACA_L004_17480_1 lane4_3600STDY6184368_CGATCTGA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184369_GTTCCACG_L004_17480_1 lane4_3600STDY6184370_ACTCTTTC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184371_TATTGGAG_L004_17480_1 lane4_3600STDY6184372_TAAACATA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184373_GTAAGATA_L004_17480_1 lane4_3600STDY6184374_TACCGCAA_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184375_TATCTCCT_L004_17480_1 lane4_3600STDY6184376_TGTCATCT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184377_ATAGCTCT_L004_17480_1 lane4_3600STDY6184378_AGTCCAAC_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184379_TTTGGGCA_L004_17480_1 lane4_3600STDY6184380_TCTGACGC_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184381_TGTCGACT_L004_17480_1 lane4_3600STDY6184382_GTCACGTA_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184383_TTGAGCGA_L004_17480_1 lane4_3600STDY6184384_GAGACATA_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184385_GTCAAGCT_L004_17480_1 lane4_3600STDY6184386_AGCAAGTT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184387_GACGCTCA_L004_17480_1 lane4_3600STDY6184388_ACGGCAGC_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184389_AGAACTGA_L004_17480_1 lane4_3600STDY6184390_CGCCTTTG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184391_TAAGGTCA_L004_17480_1 lane4_3600STDY6184392_ACGTTGGC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184393_CCAGCTTA_L004_17480_1 lane4_3600STDY6184394_GAATCCTA_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184395_ACTTCGTA_L004_17480_1 lane4_3600STDY6184396_TAGTCGGT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184397_CGCACGAG_L004_17480_1 lane4_3600STDY6184398_ACGTACTA_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184399_AGCGCCAA_L004_17480_1 lane4_3600STDY6184400_GCCTGCCC_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184401_AGGACGAT_L004_17480_1 lane4_3600STDY6184402_CTTGACCG_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184403_AGGTCTAA_L004_17480_1 lane4_3600STDY6184404_CGAGATCC_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184405_ATTAGCGG_L004_17480_1 lane4_3600STDY6184406_GCGCTGAT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184407_TGCTGAAC_L004_17480_1 lane4_3600STDY6184408_GAGGGCAG_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184409_GTTTTCAC_L004_17480_1 lane4_3600STDY6184410_GAGATGCC_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184411_TTGAGAAG_L004_17480_1 lane4_3600STDY6184412_GCATCCGG_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184413_GTCACCAG_L004_17480_1 lane4_3600STDY6184414_GAGGTCGC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184415_AAGGGGTA_L004_17480_1 lane4_3600STDY6184416_TTTTACGT_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184417_TTCCTACA_L004_17480_1 lane4_3600STDY6184418_AGTGTAGT_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184419_GTGGCCAA_L004_17480_1 lane4_3600STDY6184420_AAATACTC_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184421_CACCCGTC_L004_17480_1 lane4_3600STDY6184422_TCGTGGTT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184423_ACTTGGGG_L004_17480_1 lane4_3600STDY6184424_GGCTGCTT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184425_CAGGGTCG_L004_17480_1 lane4_3600STDY6184426_CTCGTCGA_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184427_TCTACAGT_L004_17480_1 lane4_3600STDY6184428_CTTCTAGA_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184429_AACGGCTT_L004_17480_1 lane4_3600STDY6184430_ATAAGACT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184431_GTTTTTCG_L004_17480_1 lane4_3600STDY6184432_ATTGGTAT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184433_CGCCAGTA_L004_17480_1 lane4_3600STDY6184434_AAGCCGAA_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184435_TGACCCAC_L004_17480_1 lane4_3600STDY6184436_ATTGCACA_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184437_CTTTTGAT_L004_17480_1 lane4_3600STDY6184438_TAGCGAGA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184439_TTCGCAGG_L004_17480_1 lane4_3600STDY6184440_TAGTTATT_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184441_TCCTCCGA_L004_17480_1 lane4_3600STDY6184442_GCGGGTCT_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184443_GATTCTAT_L004_17480_1 lane4_3600STDY6184444_ATGCAAAG_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184445_GTCTGAGG_L004_17480_1 lane4_3600STDY6184446_TCTGGCGA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184447_AATTTGCG_L004_17480_1 lane4_3600STDY6184448_TGGGTTGG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184449_AGTTGAAA_L004_17480_1 lane4_3600STDY6184450_GACCGGAA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184451_GATCGAAC_L004_17480_1 lane4_3600STDY6184452_GTATAGGG_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184453_GGTAAGAG_L004_17480_1 lane4_3600STDY6184454_AGTCCGAT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184455_ATACAGGC_L004_17480_1 lane4_3600STDY6184456_TGAGACTC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184457_ACTCAGGA_L004_17480_1 lane4_3600STDY6184458_GTGTCTGA_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184459_CTTGAATC_L004_17480_1 lane4_3600STDY6184460_CCGCATGA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184461_AAGTAACA_L004_17480_1 lane4_3600STDY6184462_GTGGTACT_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184463_AGCTGTGC_L004_17480_1 lane4_3600STDY6184464_TTACCTTC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184465_TCCGGGTA_L004_17480_1 lane4_3600STDY6184466_CTACGTAA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184467_TCGGACCG_L004_17480_1 lane4_3600STDY6184468_ATGCGTCG_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184469_TTCTTAGC_L004_17480_1 lane4_3600STDY6184470_TGAGTAAG_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184471_AAGTGATA_L004_17480_1 lane4_3600STDY6184472_TCGATGCG_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184473_TATTCTGG_L004_17480_1 lane4_3600STDY6184474_AGCCGTGA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184475_AAGCCTTC_L004_17480_1 lane4_3600STDY6184476_AGGTATCC_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184477_AGGATCTC_L004_17480_1 lane4_3600STDY6184478_CTGTTTGA_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184479_GGAATTTC_L004_17480_1 lane4_3600STDY6184480_TTGGAGCA_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184481_AAGGTCTG_L004_17480_1 lane4_3600STDY6184482_AATTAGGC_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184483_AATCGGGT_L004_17480_1 lane4_3600STDY6184484_AGGTAGAC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184485_CTTATTCC_L004_17480_1 lane4_3600STDY6184486_CAGGCTCT_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184487_AAAGCACG_L004_17480_1 lane4_3600STDY6184488_GTATACAC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184489_GGACATAT_L004_17480_1 lane4_3600STDY6184490_CGGTTGGG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184491_GTCCGTGA_L004_17480_1 lane4_3600STDY6184492_GCCGAACC_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184493_ACTTTACT_L004_17480_1 lane4_3600STDY6184494_GGGTCCAT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184495_ATAACTAG_L004_17480_1 lane4_3600STDY6184496_AATAGAGA_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184497_TCACCATT_L004_17480_1 lane4_3600STDY6184498_CGCCTGAT_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184499_GCGTGAAC_L004_17480_1 lane4_3600STDY6184500_TAAGGGTG_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184501_GGTGTCGA_L004_17480_1 lane4_3600STDY6184502_CCGTTAGG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184503_TGGCAAAA_L004_17480_1 lane4_3600STDY6184504_CCTACCCG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184505_AACAGCGC_L004_17480_1 lane4_3600STDY6184506_TATACATC_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184507_AAGCGACT_L004_17480_1 lane4_3600STDY6184508_GAAGCGCA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184509_ACCTCTAC_L004_17480_1 lane4_3600STDY6184510_GATTGCGT_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184511_GCTGGTTG_L004_17480_1 lane4_3600STDY6184512_ATCGTCCT_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184513_GGACACGG_L004_17480_1 lane4_3600STDY6184514_CGCACCTA_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184515_CTTCGGCT_L004_17480_1 lane4_3600STDY6184516_CGAATCGA_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184517_TAACAACT_L004_17480_1 lane4_3600STDY6184518_AGCTCTTT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184519_TAATCCCT_L004_17480_1 lane4_3600STDY6184520_AGGACACT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184521_TTACACTA_L004_17480_1 lane4_3600STDY6184522_AAACATCA_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184523_CCATAGCT_L004_17480_1 lane4_3600STDY6184524_GTTATGGC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184525_ATCCCCTA_L004_17480_1 lane4_3600STDY6184526_CATACTAC_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184527_CAATTGTT_L004_17480_1 lane4_3600STDY6184528_AAACCCGT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184529_CAGATTTC_L004_17480_1 lane4_3600STDY6184530_GCGTAGGT_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184531_GGCATTCG_L004_17480_1 lane4_3600STDY6184532_TGGGGCTT_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184533_CTGACTAC_L004_17480_1 lane4_3600STDY6184534_AACTTTTA_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184535_AGGGATTC_L004_17480_1 lane4_3600STDY6184536_CCGAGTAG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184537_GGGGACTA_L004_17480_1 lane4_3600STDY6184538_GGAGTTGA_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184539_AGCTCATC_L004_17480_1 lane4_3600STDY6184540_TAATCAAC_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184541_ACTGGTCG_L004_17480_1 lane4_3600STDY6184542_GACGATTG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184543_AGCGATGA_L004_17480_1 lane4_3600STDY6184544_GAAGAGAT_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184545_CGTATGCA_L004_17480_1 lane4_3600STDY6184546_CACGTGCG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184547_GCTTAAAC_L004_17480_1 lane4_3600STDY6184548_GTTCCGCA_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184549_GTATCGTC_L004_17480_1 lane4_3600STDY6184550_GTCCTCAC_L004_17480_1 
#>                                        "03"                                        "03" 
#> lane4_3600STDY6184551_GTACGGAC_L004_17480_1 lane4_3600STDY6184552_CATTTTGC_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184553_TCCTCTCT_L004_17480_1 lane4_3600STDY6184554_AGCAACGA_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184555_ACAGAAGA_L004_17480_1 lane4_3600STDY6184556_CGACCCTT_L004_17480_1 
#>                                        "02"                                        "03" 
#> lane4_3600STDY6184557_CTGCCTAG_L004_17480_1 lane4_3600STDY6184558_GAGCGCAT_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane4_3600STDY6184559_AACTTATC_L004_17480_1 lane4_3600STDY6184560_CCGATGTA_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184561_TTACTACC_L004_17480_1 lane4_3600STDY6184562_CAAGGAGC_L004_17480_1 
#>                                        "03"                                        "02" 
#> lane4_3600STDY6184563_TGGTTGAC_L004_17480_1 lane4_3600STDY6184564_ACCTGCTG_L004_17480_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183797_ATCACGTT_L001_17592_1 lane1_3600STDY6183798_CGATGTTT_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6183799_TTAGGCAT_L001_17592_1 lane1_3600STDY6183800_TGACCACT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183801_ACAGTGGT_L001_17592_1 lane1_3600STDY6183802_GCCAATGT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183803_CAGATCTG_L001_17592_1 lane1_3600STDY6183804_ACTTGATG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183805_GATCAGCG_L001_17592_1 lane1_3600STDY6183806_TAGCTTGT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183807_GGCTACAG_L001_17592_1 lane1_3600STDY6183808_CTTGTACT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183809_TGGTTGTT_L001_17592_1 lane1_3600STDY6183810_TCTCGGTT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183811_TAAGCGTT_L001_17592_1 lane1_3600STDY6183812_TCCGTCTT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183813_TGTACCTT_L001_17592_1 lane1_3600STDY6183814_TTCTGTGT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183815_TCTGCTGT_L001_17592_1 lane1_3600STDY6183816_TTGGAGGT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183817_TCGAGCGT_L001_17592_1 lane1_3600STDY6183818_TGATACGT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183819_TGCATAGT_L001_17592_1 lane1_3600STDY6183820_TTGACTCT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183821_TGCGATCT_L001_17592_1 lane1_3600STDY6183822_TTCCTGCT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183823_TAGTGACT_L001_17592_1 lane1_3600STDY6183824_TACAGGAT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183825_TCCTCAAT_L001_17592_1 lane1_3600STDY6183826_TGTGGTTG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183827_TAGTCTTG_L001_17592_1 lane1_3600STDY6183828_TTCCATTG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183829_TCGAAGTG_L001_17592_1 lane1_3600STDY6183830_TAACGCTG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183831_TTGGTATG_L001_17592_1 lane1_3600STDY6183832_TGAACTGG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183833_TACTTCGG_L001_17592_1 lane1_3600STDY6183834_TCTCACGG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183835_TCAGGAGG_L001_17592_1 lane1_3600STDY6183836_TAAGTTCG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183837_TCCAGTCG_L001_17592_1 lane1_3600STDY6183838_TGTATGCG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183839_TCATTGAG_L001_17592_1 lane1_3600STDY6183840_TGGCTCAG_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6183841_TATGCCAG_L001_17592_1 lane1_3600STDY6183842_TCAGATTC_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6183843_TACTAGTC_L001_17592_1 lane1_3600STDY6183844_TTCAGCTC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183845_TGTCTATC_L001_17592_1 lane1_3600STDY6183846_TATGTGGC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183847_TTACTCGC_L001_17592_1 lane1_3600STDY6183848_TCGTTAGC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183849_TACCGAGC_L001_17592_1 lane1_3600STDY6183850_TGTTCTCC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183851_TTCGCACC_L001_17592_1 lane1_3600STDY6183852_TTGCGTAC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183853_TCTACGAC_L001_17592_1 lane1_3600STDY6183854_TGACAGAC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183855_TAGAACAC_L001_17592_1 lane1_3600STDY6183856_TCATCCTA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183857_TGCTGATA_L001_17592_1 lane1_3600STDY6183858_TAGACGGA_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6183859_TGTGAAGA_L001_17592_1 lane1_3600STDY6183860_TCTCTTCA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183861_TTGTTCCA_L001_17592_1 lane1_3600STDY6183862_TGAAGCCA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183863_TACCACCA_L001_17592_1 lane1_3600STDY6183864_TGCGTGAA_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183865_GGTGAGTT_L001_17592_1 lane1_3600STDY6183866_GATCTCTT_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6183867_GTGTCCTT_L001_17592_1 lane1_3600STDY6183868_GACGGATT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183869_GCAACATT_L001_17592_1 lane1_3600STDY6183870_GGTCGTGT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183871_GAATCTGT_L001_17592_1 lane1_3600STDY6183872_GTACATCT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183873_GAGGTGCT_L001_17592_1 lane1_3600STDY6183874_GCATGGCT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183875_GTTAGCCT_L001_17592_1 lane1_3600STDY6183876_GTCGCTAT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183877_GGAATGAT_L001_17592_1 lane1_3600STDY6183878_GAGCCAAT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183879_GCTCCTTG_L001_17592_1 lane1_3600STDY6183880_GTAAGGTG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183881_GAGGATGG_L001_17592_1 lane1_3600STDY6183882_GTTGTCGG_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183883_GGATTAGG_L001_17592_1 lane1_3600STDY6183884_GATAGAGG_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183885_GTGTGTCG_L001_17592_1 lane1_3600STDY6183886_GCAATCCG_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183887_GACCTTAG_L001_17592_1 lane1_3600STDY6183888_GCCTGTTC_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183889_GCACTGTC_L001_17592_1 lane1_3600STDY6183890_GCTAACTC_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6183891_GATTCATC_L001_17592_1 lane1_3600STDY6183892_GTCTTGGC_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6183893_GTAGAAGC_L001_17592_1 lane1_3600STDY6183894_GATGGTCC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183895_GTGCTACC_L001_17592_1 lane1_3600STDY6183896_GCGATTAC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183897_GGTTGGAC_L001_17592_1 lane1_3600STDY6183898_GGCACAAC_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183899_GACACTTA_L001_17592_1 lane1_3600STDY6183900_GTGCAGTA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183901_GGAGTCTA_L001_17592_1 lane1_3600STDY6183902_GCTATGGA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183903_GAGTGCGA_L001_17592_1 lane1_3600STDY6183904_GTAACCGA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183905_GGCAAGCA_L001_17592_1 lane1_3600STDY6183906_GCCTTACA_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6183907_GAACGACA_L001_17592_1 lane1_3600STDY6183908_GCAGGTAA_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183909_GCGTCGAA_L001_17592_1 lane1_3600STDY6183910_CGTTCGGT_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183911_CACCAGGT_L001_17592_1 lane1_3600STDY6183912_CTGCGAGT_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183913_CCGTATCT_L001_17592_1 lane1_3600STDY6183914_CGCTTCCT_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183915_CAAGACCT_L001_17592_1 lane1_3600STDY6183916_CACACACT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183917_CCTAGTAT_L001_17592_1 lane1_3600STDY6183918_CCACCGAT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183919_CTTCACAT_L001_17592_1 lane1_3600STDY6183920_CTATCATG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183921_CATGAATG_L001_17592_1 lane1_3600STDY6183922_CCACTTGG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183923_CTGTACGG_L001_17592_1 lane1_3600STDY6183924_CTAGATAG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183925_CACTCGAG_L001_17592_1 lane1_3600STDY6183926_CCGACAAG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183927_CTTGCTTC_L001_17592_1 lane1_3600STDY6183928_CATAGGTC_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183929_CACATTGC_L001_17592_1 lane1_3600STDY6183930_CGCTAAGC_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6183931_CAACCTCC_L001_17592_1 lane1_3600STDY6183932_CAGCTGAC_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183933_CTCAAGAC_L001_17592_1 lane1_3600STDY6183934_CGTGTCAC_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183935_CCATGCAC_L001_17592_1 lane1_3600STDY6183936_CGTTACTA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183937_CAAGTAGA_L001_17592_1 lane1_3600STDY6183938_CTCTCTCA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183939_CGACTGCA_L001_17592_1 lane1_3600STDY6183940_CCTGAGCA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183941_CAGGCTAA_L001_17592_1 lane1_3600STDY6183942_CGGAGGAA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183943_AGGAGATT_L001_17592_1 lane1_3600STDY6183944_AGGCAGCT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183945_ACGTTCAT_L001_17592_1 lane1_3600STDY6183946_AACGTGTG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183947_AGACCGTG_L001_17592_1 lane1_3600STDY6183948_ACCTCTGG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183949_ATCCTAGG_L001_17592_1 lane1_3600STDY6183950_ATCAACCG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183951_AGGTCACG_L001_17592_1 lane1_3600STDY6183952_ACTGTTAG_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183953_AAGAGTAG_L001_17592_1 lane1_3600STDY6183954_ATTCGGAG_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6183955_ACGCAATC_L001_17592_1 lane1_3600STDY6183956_ACAAGTGC_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183957_ATGGATCC_L001_17592_1 lane1_3600STDY6183958_AGAGGACC_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183959_ATCTCCAC_L001_17592_1 lane1_3600STDY6183960_ATTGGCTA_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183961_AATCCTGA_L001_17592_1 lane1_3600STDY6183962_AGGATTCA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183963_AACTGGCA_L001_17592_1 lane1_3600STDY6183964_ACAACGCA_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183965_CGGAAACA_L001_17592_1 lane1_3600STDY6183966_AATGAATT_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6183967_TAGGACCC_L001_17592_1 lane1_3600STDY6183968_TCTCAGTG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183969_CATGGGAA_L001_17592_1 lane1_3600STDY6183970_CCTAAGAT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183971_CTCAGATA_L001_17592_1 lane1_3600STDY6183972_CCCATAGG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183973_GCTATGAC_L001_17592_1 lane1_3600STDY6183974_GCTGTGAA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6183975_ACCTTCAA_L001_17592_1 lane1_3600STDY6183976_ACAAAGCC_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183977_CAAAACCG_L001_17592_1 lane1_3600STDY6183978_GCTGGACA_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183979_AAGTCGTA_L001_17592_1 lane1_3600STDY6183980_CATCCGTA_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183981_TTGTGTCT_L001_17592_1 lane1_3600STDY6183982_TGCTCTAG_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183983_ACCCAACA_L001_17592_1 lane1_3600STDY6183984_CGATCTGA_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183985_GTTCCACG_L001_17592_1 lane1_3600STDY6183986_ACTCTTTC_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183987_TATTGGAG_L001_17592_1 lane1_3600STDY6183988_TAAACATA_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183989_GTAAGATA_L001_17592_1 lane1_3600STDY6183990_TACCGCAA_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6183991_TATCTCCT_L001_17592_1 lane1_3600STDY6183992_TGTCATCT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183993_ATAGCTCT_L001_17592_1 lane1_3600STDY6183994_AGTCCAAC_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183995_TTTGGGCA_L001_17592_1 lane1_3600STDY6183996_TCTGACGC_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6183997_TGTCGACT_L001_17592_1 lane1_3600STDY6183998_GTCACGTA_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6183999_TTGAGCGA_L001_17592_1 lane1_3600STDY6184000_GAGACATA_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6184001_GTCAAGCT_L001_17592_1 lane1_3600STDY6184002_AGCAAGTT_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6184003_GACGCTCA_L001_17592_1 lane1_3600STDY6184004_ACGGCAGC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184005_AGAACTGA_L001_17592_1 lane1_3600STDY6184006_CGCCTTTG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184007_TAAGGTCA_L001_17592_1 lane1_3600STDY6184008_ACGTTGGC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184009_CCAGCTTA_L001_17592_1 lane1_3600STDY6184010_GAATCCTA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184011_ACTTCGTA_L001_17592_1 lane1_3600STDY6184012_TAGTCGGT_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6184013_CGCACGAG_L001_17592_1 lane1_3600STDY6184014_ACGTACTA_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184015_AGCGCCAA_L001_17592_1 lane1_3600STDY6184016_GCCTGCCC_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184017_AGGACGAT_L001_17592_1 lane1_3600STDY6184018_CTTGACCG_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184019_AGGTCTAA_L001_17592_1 lane1_3600STDY6184020_CGAGATCC_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184021_ATTAGCGG_L001_17592_1 lane1_3600STDY6184022_GCGCTGAT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184023_TGCTGAAC_L001_17592_1 lane1_3600STDY6184024_GAGGGCAG_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6184025_GTTTTCAC_L001_17592_1 lane1_3600STDY6184026_GAGATGCC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184027_TTGAGAAG_L001_17592_1 lane1_3600STDY6184028_GCATCCGG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184029_GTCACCAG_L001_17592_1 lane1_3600STDY6184030_GAGGTCGC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184031_AAGGGGTA_L001_17592_1 lane1_3600STDY6184032_TTTTACGT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184033_TTCCTACA_L001_17592_1 lane1_3600STDY6184034_AGTGTAGT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184035_GTGGCCAA_L001_17592_1 lane1_3600STDY6184036_AAATACTC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184037_CACCCGTC_L001_17592_1 lane1_3600STDY6184038_TCGTGGTT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184039_ACTTGGGG_L001_17592_1 lane1_3600STDY6184040_GGCTGCTT_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184041_CAGGGTCG_L001_17592_1 lane1_3600STDY6184042_CTCGTCGA_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184043_TCTACAGT_L001_17592_1 lane1_3600STDY6184044_CTTCTAGA_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184045_AACGGCTT_L001_17592_1 lane1_3600STDY6184046_ATAAGACT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184047_GTTTTTCG_L001_17592_1 lane1_3600STDY6184048_ATTGGTAT_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6184049_CGCCAGTA_L001_17592_1 lane1_3600STDY6184050_AAGCCGAA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184051_TGACCCAC_L001_17592_1 lane1_3600STDY6184052_ATTGCACA_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6184053_CTTTTGAT_L001_17592_1 lane1_3600STDY6184054_TAGCGAGA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184055_TTCGCAGG_L001_17592_1 lane1_3600STDY6184056_TAGTTATT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184057_TCCTCCGA_L001_17592_1 lane1_3600STDY6184058_GCGGGTCT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184059_GATTCTAT_L001_17592_1 lane1_3600STDY6184060_ATGCAAAG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184061_GTCTGAGG_L001_17592_1 lane1_3600STDY6184062_TCTGGCGA_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184063_AATTTGCG_L001_17592_1 lane1_3600STDY6184064_TGGGTTGG_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184065_AGTTGAAA_L001_17592_1 lane1_3600STDY6184066_GACCGGAA_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184067_GATCGAAC_L001_17592_1 lane1_3600STDY6184068_GTATAGGG_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184069_GGTAAGAG_L001_17592_1 lane1_3600STDY6184070_AGTCCGAT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184071_ATACAGGC_L001_17592_1 lane1_3600STDY6184072_TGAGACTC_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6184073_ACTCAGGA_L001_17592_1 lane1_3600STDY6184074_GTGTCTGA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184075_CTTGAATC_L001_17592_1 lane1_3600STDY6184076_CCGCATGA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184077_AAGTAACA_L001_17592_1 lane1_3600STDY6184078_GTGGTACT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184079_AGCTGTGC_L001_17592_1 lane1_3600STDY6184080_TTACCTTC_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6184081_TCCGGGTA_L001_17592_1 lane1_3600STDY6184082_CTACGTAA_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184083_TCGGACCG_L001_17592_1 lane1_3600STDY6184084_ATGCGTCG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184085_TTCTTAGC_L001_17592_1 lane1_3600STDY6184086_TGAGTAAG_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184087_AAGTGATA_L001_17592_1 lane1_3600STDY6184088_TCGATGCG_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184089_TATTCTGG_L001_17592_1 lane1_3600STDY6184090_AGCCGTGA_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184091_AAGCCTTC_L001_17592_1 lane1_3600STDY6184092_AGGTATCC_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184093_AGGATCTC_L001_17592_1 lane1_3600STDY6184094_CTGTTTGA_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184095_GGAATTTC_L001_17592_1 lane1_3600STDY6184096_TTGGAGCA_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6184097_AAGGTCTG_L001_17592_1 lane1_3600STDY6184098_AATTAGGC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184099_AATCGGGT_L001_17592_1 lane1_3600STDY6184100_AGGTAGAC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184101_CTTATTCC_L001_17592_1 lane1_3600STDY6184102_CAGGCTCT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184103_AAAGCACG_L001_17592_1 lane1_3600STDY6184104_GTATACAC_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184105_GGACATAT_L001_17592_1 lane1_3600STDY6184106_CGGTTGGG_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184107_GTCCGTGA_L001_17592_1 lane1_3600STDY6184108_GCCGAACC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184109_ACTTTACT_L001_17592_1 lane1_3600STDY6184110_GGGTCCAT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184111_ATAACTAG_L001_17592_1 lane1_3600STDY6184112_AATAGAGA_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184113_TCACCATT_L001_17592_1 lane1_3600STDY6184114_CGCCTGAT_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184115_GCGTGAAC_L001_17592_1 lane1_3600STDY6184116_TAAGGGTG_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184117_GGTGTCGA_L001_17592_1 lane1_3600STDY6184118_CCGTTAGG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184119_TGGCAAAA_L001_17592_1 lane1_3600STDY6184120_CCTACCCG_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6184121_AACAGCGC_L001_17592_1 lane1_3600STDY6184122_TATACATC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184123_AAGCGACT_L001_17592_1 lane1_3600STDY6184124_GAAGCGCA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184125_ACCTCTAC_L001_17592_1 lane1_3600STDY6184126_GATTGCGT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184127_GCTGGTTG_L001_17592_1 lane1_3600STDY6184128_ATCGTCCT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184129_GGACACGG_L001_17592_1 lane1_3600STDY6184130_CGCACCTA_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184131_CTTCGGCT_L001_17592_1 lane1_3600STDY6184132_CGAATCGA_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184133_TAACAACT_L001_17592_1 lane1_3600STDY6184134_AGCTCTTT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184135_TAATCCCT_L001_17592_1 lane1_3600STDY6184136_AGGACACT_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184137_TTACACTA_L001_17592_1 lane1_3600STDY6184138_AAACATCA_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184139_CCATAGCT_L001_17592_1 lane1_3600STDY6184140_GTTATGGC_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184141_ATCCCCTA_L001_17592_1 lane1_3600STDY6184142_CATACTAC_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6184143_CAATTGTT_L001_17592_1 lane1_3600STDY6184144_AAACCCGT_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184145_CAGATTTC_L001_17592_1 lane1_3600STDY6184146_GCGTAGGT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184147_GGCATTCG_L001_17592_1 lane1_3600STDY6184148_TGGGGCTT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184149_CTGACTAC_L001_17592_1 lane1_3600STDY6184150_AACTTTTA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184151_AGGGATTC_L001_17592_1 lane1_3600STDY6184152_CCGAGTAG_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6184153_GGGGACTA_L001_17592_1 lane1_3600STDY6184154_GGAGTTGA_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184155_AGCTCATC_L001_17592_1 lane1_3600STDY6184156_TAATCAAC_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184157_ACTGGTCG_L001_17592_1 lane1_3600STDY6184158_GACGATTG_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184159_AGCGATGA_L001_17592_1 lane1_3600STDY6184160_GAAGAGAT_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184161_CGTATGCA_L001_17592_1 lane1_3600STDY6184162_CACGTGCG_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184163_GCTTAAAC_L001_17592_1 lane1_3600STDY6184164_GTTCCGCA_L001_17592_1 
#>                                        "02"                                        "02" 
#> lane1_3600STDY6184165_GTATCGTC_L001_17592_1 lane1_3600STDY6184166_GTCCTCAC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184167_GTACGGAC_L001_17592_1 lane1_3600STDY6184168_CATTTTGC_L001_17592_1 
#>                                        "02"                                        "03" 
#> lane1_3600STDY6184169_TCCTCTCT_L001_17592_1 lane1_3600STDY6184170_AGCAACGA_L001_17592_1 
#>                                        "03"                                        "02" 
#> lane1_3600STDY6184171_ACAGAAGA_L001_17592_1 lane1_3600STDY6184172_CGACCCTT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184173_CTGCCTAG_L001_17592_1 lane1_3600STDY6184174_GAGCGCAT_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184175_AACTTATC_L001_17592_1 lane1_3600STDY6184176_CCGATGTA_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184177_TTACTACC_L001_17592_1 lane1_3600STDY6184178_CAAGGAGC_L001_17592_1 
#>                                        "03"                                        "03" 
#> lane1_3600STDY6184179_TGGTTGAC_L001_17592_1 lane1_3600STDY6184180_ACCTGCTG_L001_17592_1 
#>                                        "03"                                        "02"

Top rows heatmap

Heatmaps of the top rows:

top_rows_heatmap(res_rh)

plot of chunk top-rows-heatmap

Top rows on each node:

top_rows_overlap(res_rh, method = "upset")

plot of chunk top-rows-overlap

UMAP plot

UMAP plot which shows how samples are separated.

par(mfrow = c(1, 2))
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 910),
    method = "UMAP", top_value_method = "SD", top_n = 2000, scale_rows = FALSE)
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 910),
    method = "UMAP", top_value_method = "ATC", top_n = 2000, scale_rows = TRUE)

plot of chunk tab-dimension-reduction-by-depth-1

par(mfrow = c(1, 2))
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 981),
    method = "UMAP", top_value_method = "SD", top_n = 2000, scale_rows = FALSE)
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 981),
    method = "UMAP", top_value_method = "ATC", top_n = 2000, scale_rows = TRUE)

plot of chunk tab-dimension-reduction-by-depth-2

par(mfrow = c(1, 2))
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 1085),
    method = "UMAP", top_value_method = "SD", top_n = 2000, scale_rows = FALSE)
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 1085),
    method = "UMAP", top_value_method = "ATC", top_n = 2000, scale_rows = TRUE)

plot of chunk tab-dimension-reduction-by-depth-3

par(mfrow = c(1, 2))
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 1435),
    method = "UMAP", top_value_method = "SD", top_n = 2000, scale_rows = FALSE)
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 1435),
    method = "UMAP", top_value_method = "ATC", top_n = 2000, scale_rows = TRUE)

plot of chunk tab-dimension-reduction-by-depth-4

par(mfrow = c(1, 2))
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 1489),
    method = "UMAP", top_value_method = "SD", top_n = 2000, scale_rows = FALSE)
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 1489),
    method = "UMAP", top_value_method = "ATC", top_n = 2000, scale_rows = TRUE)

plot of chunk tab-dimension-reduction-by-depth-5

par(mfrow = c(1, 2))
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 1764),
    method = "UMAP", top_value_method = "SD", top_n = 2000, scale_rows = FALSE)
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 1764),
    method = "UMAP", top_value_method = "ATC", top_n = 2000, scale_rows = TRUE)

plot of chunk tab-dimension-reduction-by-depth-6

par(mfrow = c(1, 2))
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 1878),
    method = "UMAP", top_value_method = "SD", top_n = 2000, scale_rows = FALSE)
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 1878),
    method = "UMAP", top_value_method = "ATC", top_n = 2000, scale_rows = TRUE)

plot of chunk tab-dimension-reduction-by-depth-7

par(mfrow = c(1, 2))
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 2688),
    method = "UMAP", top_value_method = "SD", top_n = 2000, scale_rows = FALSE)
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 2688),
    method = "UMAP", top_value_method = "ATC", top_n = 2000, scale_rows = TRUE)

plot of chunk tab-dimension-reduction-by-depth-8

par(mfrow = c(1, 2))
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 5150),
    method = "UMAP", top_value_method = "SD", top_n = 2000, scale_rows = FALSE)
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 5150),
    method = "UMAP", top_value_method = "ATC", top_n = 2000, scale_rows = TRUE)

plot of chunk tab-dimension-reduction-by-depth-9

par(mfrow = c(1, 2))
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 5659),
    method = "UMAP", top_value_method = "SD", top_n = 2000, scale_rows = FALSE)
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 5659),
    method = "UMAP", top_value_method = "ATC", top_n = 2000, scale_rows = TRUE)

plot of chunk tab-dimension-reduction-by-depth-10

par(mfrow = c(1, 2))
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 9665),
    method = "UMAP", top_value_method = "SD", top_n = 2000, scale_rows = FALSE)
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 9665),
    method = "UMAP", top_value_method = "ATC", top_n = 2000, scale_rows = TRUE)

plot of chunk tab-dimension-reduction-by-depth-11

par(mfrow = c(1, 2))
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 10425),
    method = "UMAP", top_value_method = "SD", top_n = 2000, scale_rows = FALSE)
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 10425),
    method = "UMAP", top_value_method = "ATC", top_n = 2000, scale_rows = TRUE)

plot of chunk tab-dimension-reduction-by-depth-12

par(mfrow = c(1, 2))
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 10635),
    method = "UMAP", top_value_method = "SD", top_n = 2000, scale_rows = FALSE)
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 10635),
    method = "UMAP", top_value_method = "ATC", top_n = 2000, scale_rows = TRUE)

plot of chunk tab-dimension-reduction-by-depth-13

par(mfrow = c(1, 2))
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 12250),
    method = "UMAP", top_value_method = "SD", top_n = 2000, scale_rows = FALSE)
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 12250),
    method = "UMAP", top_value_method = "ATC", top_n = 2000, scale_rows = TRUE)

plot of chunk tab-dimension-reduction-by-depth-14

par(mfrow = c(1, 2))
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 13342),
    method = "UMAP", top_value_method = "SD", top_n = 2000, scale_rows = FALSE)
dimension_reduction(res_rh, merge_node = merge_node_param(min_n_signatures = 13342),
    method = "UMAP", top_value_method = "ATC", top_n = 2000, scale_rows = TRUE)

plot of chunk tab-dimension-reduction-by-depth-15

Signature heatmap

Signatures on the heatmap are the union of all signatures found on every node on the hierarchy. The number of k-means on rows are automatically selected by the function.

get_signatures(res_rh, merge_node = merge_node_param(min_n_signatures = 910))

plot of chunk tab-get-signatures-from-hierarchical-partition-1

get_signatures(res_rh, merge_node = merge_node_param(min_n_signatures = 981))

plot of chunk tab-get-signatures-from-hierarchical-partition-2

get_signatures(res_rh, merge_node = merge_node_param(min_n_signatures = 1085))

plot of chunk tab-get-signatures-from-hierarchical-partition-3

get_signatures(res_rh, merge_node = merge_node_param(min_n_signatures = 1435))

plot of chunk tab-get-signatures-from-hierarchical-partition-4

get_signatures(res_rh, merge_node = merge_node_param(min_n_signatures = 1489))

plot of chunk tab-get-signatures-from-hierarchical-partition-5

get_signatures(res_rh, merge_node = merge_node_param(min_n_signatures = 1764))

plot of chunk tab-get-signatures-from-hierarchical-partition-6

get_signatures(res_rh, merge_node = merge_node_param(min_n_signatures = 1878))

plot of chunk tab-get-signatures-from-hierarchical-partition-7

get_signatures(res_rh, merge_node = merge_node_param(min_n_signatures = 2688))

plot of chunk tab-get-signatures-from-hierarchical-partition-8

get_signatures(res_rh, merge_node = merge_node_param(min_n_signatures = 5150))

plot of chunk tab-get-signatures-from-hierarchical-partition-9

get_signatures(res_rh, merge_node = merge_node_param(min_n_signatures = 5659))

plot of chunk tab-get-signatures-from-hierarchical-partition-10

get_signatures(res_rh, merge_node = merge_node_param(min_n_signatures = 9665))

plot of chunk tab-get-signatures-from-hierarchical-partition-11

get_signatures(res_rh, merge_node = merge_node_param(min_n_signatures = 10425))

plot of chunk tab-get-signatures-from-hierarchical-partition-12

get_signatures(res_rh, merge_node = merge_node_param(min_n_signatures = 10635))

plot of chunk tab-get-signatures-from-hierarchical-partition-13

get_signatures(res_rh, merge_node = merge_node_param(min_n_signatures = 12250))

plot of chunk tab-get-signatures-from-hierarchical-partition-14

get_signatures(res_rh, merge_node = merge_node_param(min_n_signatures = 13342))

plot of chunk tab-get-signatures-from-hierarchical-partition-15

Compare signatures from different nodes:

compare_signatures(res_rh, verbose = FALSE)

plot of chunk unnamed-chunk-24

If there are too many signatures, top_signatures = ... can be set to only show the signatures with the highest FDRs. Note it only works on every node and the final signatures are the union of all signatures of all nodes.

# code only for demonstration
# e.g. to show the top 500 most significant rows on each node.
tb = get_signature(res_rh, top_signatures = 500)

Test to known annotations

Test correlation between subgroups and known annotations. If the known annotation is numeric, one-way ANOVA test is applied, and if the known annotation is discrete, chi-squared contingency table test is applied.

test_to_known_factors(res_rh, merge_node = merge_node_param(min_n_signatures = 910))
#>       phenotype
#> class  5.9e-244
test_to_known_factors(res_rh, merge_node = merge_node_param(min_n_signatures = 981))
#>       phenotype
#> class 1.13e-244
test_to_known_factors(res_rh, merge_node = merge_node_param(min_n_signatures = 1085))
#>       phenotype
#> class 1.37e-245
test_to_known_factors(res_rh, merge_node = merge_node_param(min_n_signatures = 1435))
#>       phenotype
#> class 2.65e-247
test_to_known_factors(res_rh, merge_node = merge_node_param(min_n_signatures = 1489))
#>       phenotype
#> class 3.56e-248
test_to_known_factors(res_rh, merge_node = merge_node_param(min_n_signatures = 1764))
#>       phenotype
#> class 4.78e-249
test_to_known_factors(res_rh, merge_node = merge_node_param(min_n_signatures = 1878))
#>       phenotype
#> class 7.69e-251
test_to_known_factors(res_rh, merge_node = merge_node_param(min_n_signatures = 2688))
#>       phenotype
#> class 1.11e-252
test_to_known_factors(res_rh, merge_node = merge_node_param(min_n_signatures = 5150))
#>       phenotype
#> class 1.43e-254
test_to_known_factors(res_rh, merge_node = merge_node_param(min_n_signatures = 5659))
#>       phenotype
#> class 5.29e-239
test_to_known_factors(res_rh, merge_node = merge_node_param(min_n_signatures = 9665))
#>       phenotype
#> class 4.97e-232
test_to_known_factors(res_rh, merge_node = merge_node_param(min_n_signatures = 10425))
#>       phenotype
#> class 1.96e-230
test_to_known_factors(res_rh, merge_node = merge_node_param(min_n_signatures = 10635))
#>       phenotype
#> class 3.63e-220
test_to_known_factors(res_rh, merge_node = merge_node_param(min_n_signatures = 12250))
#>       phenotype
#> class 9.08e-181
test_to_known_factors(res_rh, merge_node = merge_node_param(min_n_signatures = 13342))
#>       phenotype
#> class 1.61e-157

Results for each node


Node0

Child nodes: Node01 , Node02 , Node03 .

The object with results only for a single top-value method and a single partitioning method can be extracted as:

res = res_rh["0"]

A summary of res and all the functions that can be applied to it:

res
#> A 'DownSamplingConsensusPartition' object with k = 2, 3, 4.
#>   On a matrix with 17869 rows and 500 columns, randomly sampled from 1344 columns.
#>   Top rows (1679) are extracted by 'ATC' method.
#>   Subgroups are detected by 'skmeans' method.
#>   Performed in total 150 partitions by row resampling.
#>   Best k for subgroups seems to be 4.
#> 
#> Following methods can be applied to this 'DownSamplingConsensusPartition' object:
#>  [1] "cola_report"             "collect_classes"         "collect_plots"          
#>  [4] "collect_stats"           "colnames"                "compare_partitions"     
#>  [7] "compare_signatures"      "consensus_heatmap"       "dimension_reduction"    
#> [10] "functional_enrichment"   "get_anno_col"            "get_anno"               
#> [13] "get_classes"             "get_consensus"           "get_matrix"             
#> [16] "get_membership"          "get_param"               "get_signatures"         
#> [19] "get_stats"               "is_best_k"               "is_stable_k"            
#> [22] "membership_heatmap"      "ncol"                    "nrow"                   
#> [25] "plot_ecdf"               "predict_classes"         "rownames"               
#> [28] "select_partition_number" "show"                    "suggest_best_k"         
#> [31] "test_to_known_factors"   "top_rows_heatmap"

collect_plots() function collects all the plots made from res for all k (number of subgroups) into one single page to provide an easy and fast comparison between different k.

collect_plots(res)

plot of chunk node-0-collect-plots

The plots are:

All the plots in panels can be made by individual functions and they are plotted later in this section.

select_partition_number() produces several plots showing different statistics for choosing “optimized” k. There are following statistics:

The detailed explanations of these statistics can be found in the cola vignette.

Generally speaking, higher 1-PAC score, higher mean silhouette score or higher concordance corresponds to better partition. Rand index and Jaccard index measure how similar the current partition is compared to partition with k-1. If they are too similar, we won't accept k is better than k-1.

select_partition_number(res)

plot of chunk node-0-select-partition-number

The numeric values for all these statistics can be obtained by get_stats().

get_stats(res)
#>   k 1-PAC mean_silhouette concordance area_increased  Rand Jaccard
#> 2 2     1           0.982       0.993         0.4999 0.501   0.501
#> 3 3     1           0.995       0.998         0.3095 0.792   0.605
#> 4 4     1           0.993       0.997         0.0993 0.915   0.762

suggest_best_k() suggests the best \(k\) based on these statistics. The rules are as follows:

suggest_best_k(res)
#> [1] 4
#> attr(,"optional")
#> [1] 2 3

There is also optional best \(k\) = 2 3 that is worth to check.

Following is the table of the partitions (You need to click the show/hide code output link to see it). The membership matrix (columns with name p*) is inferred by clue::cl_consensus() function with the SE method. Basically the value in the membership matrix represents the probability to belong to a certain group. The finall subgroup label for an item is determined with the group with highest probability it belongs to.

In get_classes() function, the entropy is calculated from the membership matrix and the silhouette score is calculated from the consensus matrix.

show/hide code output

get_classes(res, k = 2)
#>                                             class     p
#> lane1_3600STDY6077864_ATCACGTT_L001_15986_1     2 0.000
#> lane1_3600STDY6077865_CGATGTTT_L001_15986_1     2 0.253
#> lane1_3600STDY6077866_TTAGGCAT_L001_15986_1     1 0.000
#> lane1_3600STDY6077867_TGACCACT_L001_15986_1     1 0.000
#> lane1_3600STDY6077868_ACAGTGGT_L001_15986_1     1 0.000
#> lane1_3600STDY6077869_GCCAATGT_L001_15986_1     1 0.000
#> lane1_3600STDY6077870_CAGATCTG_L001_15986_1     1 0.000
#> lane1_3600STDY6077871_ACTTGATG_L001_15986_1     1 0.000
#> lane1_3600STDY6077872_GATCAGCG_L001_15986_1     1 0.000
#> lane1_3600STDY6077873_TAGCTTGT_L001_15986_1     1 0.000
#> lane1_3600STDY6077874_GGCTACAG_L001_15986_1     1 0.000
#> lane1_3600STDY6077875_CTTGTACT_L001_15986_1     1 0.000
#> lane1_3600STDY6077876_TGGTTGTT_L001_15986_1     1 0.000
#> lane1_3600STDY6077877_TCTCGGTT_L001_15986_1     1 0.000
#> lane1_3600STDY6077878_TAAGCGTT_L001_15986_1     1 0.000
#> lane1_3600STDY6077879_TCCGTCTT_L001_15986_1     1 0.000
#> lane1_3600STDY6077880_TGTACCTT_L001_15986_1     1 0.000
#> lane1_3600STDY6077881_TTCTGTGT_L001_15986_1     1 0.000
#> lane1_3600STDY6077882_TCTGCTGT_L001_15986_1     1 0.000
#> lane1_3600STDY6077883_TTGGAGGT_L001_15986_1     2 0.000
#> lane1_3600STDY6077884_TCGAGCGT_L001_15986_1     1 0.000
#> lane1_3600STDY6077885_TGATACGT_L001_15986_1     1 0.000
#> lane1_3600STDY6077886_TGCATAGT_L001_15986_1     1 0.000
#> lane1_3600STDY6077887_TTGACTCT_L001_15986_1     1 0.000
#> lane1_3600STDY6077888_TGCGATCT_L001_15986_1     1 0.000
#> lane1_3600STDY6077889_TTCCTGCT_L001_15986_1     1 0.000
#> lane1_3600STDY6077890_TAGTGACT_L001_15986_1     1 0.000
#> lane1_3600STDY6077891_TACAGGAT_L001_15986_1     1 0.000
#> lane1_3600STDY6077892_TCCTCAAT_L001_15986_1     1 0.000
#> lane1_3600STDY6077893_TGTGGTTG_L001_15986_1     1 0.000
#> lane1_3600STDY6077894_TAGTCTTG_L001_15986_1     1 0.000
#> lane1_3600STDY6077895_TTCCATTG_L001_15986_1     1 0.000
#> lane1_3600STDY6077896_TCGAAGTG_L001_15986_1     1 0.000
#> lane1_3600STDY6077897_TAACGCTG_L001_15986_1     1 0.000
#> lane1_3600STDY6077898_TTGGTATG_L001_15986_1     1 0.000
#> lane1_3600STDY6077899_TGAACTGG_L001_15986_1     2 0.253
#> lane1_3600STDY6077900_TACTTCGG_L001_15986_1     1 0.000
#> lane1_3600STDY6077901_TCTCACGG_L001_15986_1     1 0.000
#> lane1_3600STDY6077902_TCAGGAGG_L001_15986_1     1 0.000
#> lane1_3600STDY6077903_TAAGTTCG_L001_15986_1     1 0.000
#> lane1_3600STDY6077904_TCCAGTCG_L001_15986_1     2 0.253
#> lane1_3600STDY6077905_TGTATGCG_L001_15986_1     1 0.000
#> lane1_3600STDY6077906_TCATTGAG_L001_15986_1     1 0.000
#> lane1_3600STDY6077907_TGGCTCAG_L001_15986_1     1 0.000
#> lane1_3600STDY6077908_TATGCCAG_L001_15986_1     1 0.000
#> lane1_3600STDY6077909_TCAGATTC_L001_15986_1     1 0.000
#> lane1_3600STDY6077910_TACTAGTC_L001_15986_1     1 0.000
#> lane1_3600STDY6077911_TTCAGCTC_L001_15986_1     2 0.253
#> lane1_3600STDY6077912_TGTCTATC_L001_15986_1     1 0.000
#> lane1_3600STDY6077913_TATGTGGC_L001_15986_1     1 0.000
#> lane1_3600STDY6077914_TTACTCGC_L001_15986_1     2 0.253
#> lane1_3600STDY6077915_TCGTTAGC_L001_15986_1     1 0.000
#> lane1_3600STDY6077916_TACCGAGC_L001_15986_1     1 0.000
#> lane1_3600STDY6077917_TGTTCTCC_L001_15986_1     1 0.000
#> lane1_3600STDY6077918_TTCGCACC_L001_15986_1     1 0.000
#> lane1_3600STDY6077919_TTGCGTAC_L001_15986_1     1 0.000
#> lane1_3600STDY6077920_TCTACGAC_L001_15986_1     1 0.000
#> lane1_3600STDY6077921_TGACAGAC_L001_15986_1     1 0.000
#> lane1_3600STDY6077922_TAGAACAC_L001_15986_1     1 0.000
#> lane1_3600STDY6077923_TCATCCTA_L001_15986_1     1 0.000
#> lane1_3600STDY6077924_TGCTGATA_L001_15986_1     1 0.000
#> lane1_3600STDY6077925_TAGACGGA_L001_15986_1     1 0.000
#> lane1_3600STDY6077926_TGTGAAGA_L001_15986_1     1 0.000
#> lane1_3600STDY6077927_TCTCTTCA_L001_15986_1     1 0.000
#> lane1_3600STDY6077928_TTGTTCCA_L001_15986_1     1 0.000
#> lane1_3600STDY6077929_TGAAGCCA_L001_15986_1     1 0.000
#> lane1_3600STDY6077930_TACCACCA_L001_15986_1     1 0.000
#> lane1_3600STDY6077931_TGCGTGAA_L001_15986_1     1 0.000
#> lane1_3600STDY6077932_GGTGAGTT_L001_15986_1     1 0.000
#> lane1_3600STDY6077933_GATCTCTT_L001_15986_1     2 0.253
#> lane1_3600STDY6077934_GTGTCCTT_L001_15986_1     2 0.000
#> lane1_3600STDY6077935_GACGGATT_L001_15986_1     1 0.000
#> lane1_3600STDY6077936_GCAACATT_L001_15986_1     1 0.000
#> lane1_3600STDY6077937_GGTCGTGT_L001_15986_1     1 0.000
#> lane1_3600STDY6077938_GAATCTGT_L001_15986_1     1 0.000
#> lane1_3600STDY6077939_GTACATCT_L001_15986_1     1 0.000
#> lane1_3600STDY6077940_GAGGTGCT_L001_15986_1     1 0.000
#> lane1_3600STDY6077941_GCATGGCT_L001_15986_1     1 0.000
#> lane1_3600STDY6077942_GTTAGCCT_L001_15986_1     1 0.000
#> lane1_3600STDY6077943_GTCGCTAT_L001_15986_1     1 0.000
#> lane1_3600STDY6077944_GGAATGAT_L001_15986_1     1 0.000
#> lane1_3600STDY6077945_GAGCCAAT_L001_15986_1     1 0.000
#> lane1_3600STDY6077946_GCTCCTTG_L001_15986_1     1 0.000
#> lane1_3600STDY6077947_GTAAGGTG_L001_15986_1     1 0.000
#> lane1_3600STDY6077948_GAGGATGG_L001_15986_1     1 0.000
#> lane1_3600STDY6077949_GTTGTCGG_L001_15986_1     1 0.000
#> lane1_3600STDY6077950_GGATTAGG_L001_15986_1     1 0.000
#> lane1_3600STDY6077951_GATAGAGG_L001_15986_1     1 0.000
#> lane1_3600STDY6077952_GTGTGTCG_L001_15986_1     1 0.000
#> lane1_3600STDY6077953_GCAATCCG_L001_15986_1     1 0.000
#> lane1_3600STDY6077954_GACCTTAG_L001_15986_1     1 0.000
#> lane1_3600STDY6077955_GCCTGTTC_L001_15986_1     1 0.000
#> lane1_3600STDY6077956_GCACTGTC_L001_15986_1     1 0.000
#> lane1_3600STDY6077957_GCTAACTC_L001_15986_1     1 0.000
#> lane1_3600STDY6077958_GATTCATC_L001_15986_1     1 0.000
#> lane1_3600STDY6077959_GTCTTGGC_L001_15986_1     1 0.000
#> lane3_3600STDY6077960_ATCACGTT_L003_15987_1     2 0.000
#> lane3_3600STDY6077961_CGATGTTT_L003_15987_1     2 0.000
#> lane3_3600STDY6077962_TTAGGCAT_L003_15987_1     1 0.000
#> lane3_3600STDY6077963_TGACCACT_L003_15987_1     1 0.249
#> lane3_3600STDY6077964_ACAGTGGT_L003_15987_1     1 0.249
#> lane3_3600STDY6077965_GCCAATGT_L003_15987_1     1 0.000
#> lane3_3600STDY6077966_CAGATCTG_L003_15987_1     1 0.000
#> lane3_3600STDY6077967_ACTTGATG_L003_15987_1     1 0.751
#> lane3_3600STDY6077968_GATCAGCG_L003_15987_1     1 0.000
#> lane3_3600STDY6077969_TAGCTTGT_L003_15987_1     1 0.502
#> lane3_3600STDY6077970_GGCTACAG_L003_15987_1     1 0.000
#> lane3_3600STDY6077971_CTTGTACT_L003_15987_1     1 0.000
#> lane3_3600STDY6077972_TGGTTGTT_L003_15987_1     1 0.751
#> lane3_3600STDY6077973_TCTCGGTT_L003_15987_1     1 0.249
#> lane3_3600STDY6077974_TAAGCGTT_L003_15987_1     1 0.000
#> lane3_3600STDY6077975_TCCGTCTT_L003_15987_1     1 0.249
#> lane3_3600STDY6077976_TGTACCTT_L003_15987_1     1 0.000
#> lane3_3600STDY6077977_TTCTGTGT_L003_15987_1     1 0.000
#> lane3_3600STDY6077978_TCTGCTGT_L003_15987_1     2 0.253
#> lane3_3600STDY6077979_TTGGAGGT_L003_15987_1     1 0.000
#> lane3_3600STDY6077980_TCGAGCGT_L003_15987_1     1 0.000
#> lane3_3600STDY6077981_TGATACGT_L003_15987_1     1 0.000
#> lane3_3600STDY6077982_TGCATAGT_L003_15987_1     1 0.751
#> lane3_3600STDY6077983_TTGACTCT_L003_15987_1     1 0.000
#> lane3_3600STDY6077984_TGCGATCT_L003_15987_1     1 0.751
#> lane3_3600STDY6077985_TTCCTGCT_L003_15987_1     1 0.249
#> lane3_3600STDY6077986_TAGTGACT_L003_15987_1     1 0.000
#> lane3_3600STDY6077987_TACAGGAT_L003_15987_1     1 0.000
#> lane3_3600STDY6077988_TCCTCAAT_L003_15987_1     1 0.249
#> lane3_3600STDY6077989_TGTGGTTG_L003_15987_1     1 0.498
#> lane3_3600STDY6077990_TAGTCTTG_L003_15987_1     1 0.000
#> lane3_3600STDY6077991_TTCCATTG_L003_15987_1     1 0.253
#> lane3_3600STDY6077992_TCGAAGTG_L003_15987_1     1 0.249
#> lane3_3600STDY6077993_TAACGCTG_L003_15987_1     1 0.751
#> lane3_3600STDY6077994_TTGGTATG_L003_15987_1     1 0.249
#> lane3_3600STDY6077995_TGAACTGG_L003_15987_1     1 0.000
#> lane3_3600STDY6077996_TACTTCGG_L003_15987_1     1 0.000
#> lane3_3600STDY6077997_TCTCACGG_L003_15987_1     2 0.502
#> lane3_3600STDY6077998_TCAGGAGG_L003_15987_1     1 0.253
#> lane3_3600STDY6077999_TAAGTTCG_L003_15987_1     1 0.253
#> lane3_3600STDY6078000_TCCAGTCG_L003_15987_1     1 0.000
#> lane3_3600STDY6078001_TGTATGCG_L003_15987_1     2 0.000
#> lane3_3600STDY6078002_TCATTGAG_L003_15987_1     1 0.000
#> lane3_3600STDY6078003_TGGCTCAG_L003_15987_1     1 0.000
#> lane3_3600STDY6078004_TATGCCAG_L003_15987_1     1 0.000
#> lane3_3600STDY6078005_TCAGATTC_L003_15987_1     1 0.751
#> lane3_3600STDY6078006_TACTAGTC_L003_15987_1     1 0.502
#> lane3_3600STDY6078007_TTCAGCTC_L003_15987_1     1 0.751
#> lane3_3600STDY6078008_TGTCTATC_L003_15987_1     1 0.000
#> lane3_3600STDY6078009_TATGTGGC_L003_15987_1     1 0.253
#> lane3_3600STDY6078010_TTACTCGC_L003_15987_1     1 0.249
#> lane3_3600STDY6078011_TCGTTAGC_L003_15987_1     1 0.000
#> lane3_3600STDY6078012_TACCGAGC_L003_15987_1     1 0.751
#> lane3_3600STDY6078013_TGTTCTCC_L003_15987_1     1 0.253
#> lane3_3600STDY6078014_TTCGCACC_L003_15987_1     1 0.000
#> lane3_3600STDY6078015_TTGCGTAC_L003_15987_1     1 0.751
#> lane3_3600STDY6078016_TCTACGAC_L003_15987_1     1 0.000
#> lane3_3600STDY6078017_TGACAGAC_L003_15987_1     1 0.000
#> lane3_3600STDY6078018_TAGAACAC_L003_15987_1     1 0.502
#> lane3_3600STDY6078019_TCATCCTA_L003_15987_1     1 0.751
#> lane3_3600STDY6078020_TGCTGATA_L003_15987_1     1 0.498
#> lane3_3600STDY6078021_TAGACGGA_L003_15987_1     1 0.000
#> lane3_3600STDY6078022_TGTGAAGA_L003_15987_1     1 0.249
#> lane3_3600STDY6078023_TCTCTTCA_L003_15987_1     1 0.000
#> lane3_3600STDY6078024_TTGTTCCA_L003_15987_1     1 0.000
#> lane3_3600STDY6078025_TGAAGCCA_L003_15987_1     1 0.000
#> lane3_3600STDY6078026_TACCACCA_L003_15987_1     1 0.502
#> lane3_3600STDY6078027_TGCGTGAA_L003_15987_1     2 0.249
#> lane3_3600STDY6078028_GGTGAGTT_L003_15987_1     1 0.502
#> lane3_3600STDY6078029_GATCTCTT_L003_15987_1     1 0.498
#> lane3_3600STDY6078030_GTGTCCTT_L003_15987_1     1 0.751
#> lane3_3600STDY6078031_GACGGATT_L003_15987_1     1 0.249
#> lane3_3600STDY6078032_GCAACATT_L003_15987_1     1 0.249
#> lane3_3600STDY6078033_GGTCGTGT_L003_15987_1     1 0.000
#> lane3_3600STDY6078034_GAATCTGT_L003_15987_1     1 0.502
#> lane3_3600STDY6078035_GTACATCT_L003_15987_1     1 1.000
#> lane3_3600STDY6078036_GAGGTGCT_L003_15987_1     1 0.502
#> lane3_3600STDY6078037_GCATGGCT_L003_15987_1     1 0.000
#> lane3_3600STDY6078038_GTTAGCCT_L003_15987_1     1 0.000
#> lane3_3600STDY6078039_GTCGCTAT_L003_15987_1     1 0.502
#> lane3_3600STDY6078040_GGAATGAT_L003_15987_1     1 0.000
#> lane3_3600STDY6078041_GAGCCAAT_L003_15987_1     1 0.498
#> lane3_3600STDY6078042_GCTCCTTG_L003_15987_1     1 0.000
#> lane3_3600STDY6078043_GTAAGGTG_L003_15987_1     1 0.000
#> lane3_3600STDY6078044_GAGGATGG_L003_15987_1     1 0.000
#> lane3_3600STDY6078045_GTTGTCGG_L003_15987_1     1 0.000
#> lane3_3600STDY6078046_GGATTAGG_L003_15987_1     1 0.000
#> lane3_3600STDY6078047_GATAGAGG_L003_15987_1     1 0.000
#> lane3_3600STDY6078048_GTGTGTCG_L003_15987_1     1 0.000
#> lane3_3600STDY6078049_GCAATCCG_L003_15987_1     1 0.249
#> lane3_3600STDY6078050_GACCTTAG_L003_15987_1     1 0.249
#> lane3_3600STDY6078051_GCCTGTTC_L003_15987_1     1 0.000
#> lane3_3600STDY6078052_GCACTGTC_L003_15987_1     1 0.000
#> lane3_3600STDY6078053_GCTAACTC_L003_15987_1     1 0.000
#> lane3_3600STDY6078054_GATTCATC_L003_15987_1     1 0.000
#> lane3_3600STDY6078055_GTCTTGGC_L003_15987_1     1 0.000
#> lane1_3600STDY6167693_ATCACGTT_L001_17236_1     1 0.000
#> lane1_3600STDY6167694_CGATGTTT_L001_17236_1     1 0.249
#> lane1_3600STDY6167695_TTAGGCAT_L001_17236_1     1 0.000
#> lane1_3600STDY6167696_TGACCACT_L001_17236_1     1 0.000
#> lane1_3600STDY6167697_ACAGTGGT_L001_17236_1     2 1.000
#> lane1_3600STDY6167698_GCCAATGT_L001_17236_1     1 0.000
#> lane1_3600STDY6167699_CAGATCTG_L001_17236_1     1 0.000
#> lane1_3600STDY6167700_ACTTGATG_L001_17236_1     2 0.000
#> lane1_3600STDY6167701_GATCAGCG_L001_17236_1     1 0.000
#> lane1_3600STDY6167702_TAGCTTGT_L001_17236_1     1 0.000
#> lane1_3600STDY6167703_GGCTACAG_L001_17236_1     1 0.000
#> lane1_3600STDY6167704_CTTGTACT_L001_17236_1     2 1.000
#> lane1_3600STDY6167705_TGGTTGTT_L001_17236_1     1 0.000
#> lane1_3600STDY6167706_TCTCGGTT_L001_17236_1     2 0.000
#> lane1_3600STDY6167707_TAAGCGTT_L001_17236_1     2 0.000
#> lane1_3600STDY6167708_TCCGTCTT_L001_17236_1     1 0.000
#> lane1_3600STDY6167709_TGTACCTT_L001_17236_1     1 0.000
#> lane1_3600STDY6167710_TTCTGTGT_L001_17236_1     2 0.000
#> lane1_3600STDY6167711_TCTGCTGT_L001_17236_1     1 0.000
#> lane1_3600STDY6167712_TTGGAGGT_L001_17236_1     1 0.000
#> lane1_3600STDY6167713_TCGAGCGT_L001_17236_1     1 0.000
#> lane1_3600STDY6167714_TGATACGT_L001_17236_1     1 0.000
#> lane1_3600STDY6167715_TGCATAGT_L001_17236_1     1 0.000
#> lane1_3600STDY6167716_TTGACTCT_L001_17236_1     1 0.000
#> lane1_3600STDY6167717_TGCGATCT_L001_17236_1     1 0.249
#> lane1_3600STDY6167718_TTCCTGCT_L001_17236_1     2 0.000
#> lane1_3600STDY6167719_TAGTGACT_L001_17236_1     1 0.000
#> lane1_3600STDY6167720_TACAGGAT_L001_17236_1     1 0.000
#> lane1_3600STDY6167721_TCCTCAAT_L001_17236_1     1 0.000
#> lane1_3600STDY6167722_TGTGGTTG_L001_17236_1     1 0.000
#> lane1_3600STDY6167723_TAGTCTTG_L001_17236_1     1 0.249
#> lane1_3600STDY6167724_TTCCATTG_L001_17236_1     2 0.000
#> lane1_3600STDY6167725_TCGAAGTG_L001_17236_1     1 0.000
#> lane1_3600STDY6167726_TAACGCTG_L001_17236_1     1 0.000
#> lane1_3600STDY6167727_TTGGTATG_L001_17236_1     1 0.000
#> lane1_3600STDY6167728_TGAACTGG_L001_17236_1     1 0.000
#> lane1_3600STDY6167729_TACTTCGG_L001_17236_1     1 0.000
#> lane1_3600STDY6167730_TCTCACGG_L001_17236_1     1 0.000
#> lane1_3600STDY6167731_TCAGGAGG_L001_17236_1     1 0.000
#> lane1_3600STDY6167732_TAAGTTCG_L001_17236_1     1 0.000
#> lane1_3600STDY6167733_TCCAGTCG_L001_17236_1     1 0.000
#> lane1_3600STDY6167734_TGTATGCG_L001_17236_1     2 0.000
#> lane1_3600STDY6167735_TCATTGAG_L001_17236_1     1 0.000
#> lane1_3600STDY6167736_TGGCTCAG_L001_17236_1     1 0.000
#> lane1_3600STDY6167737_TATGCCAG_L001_17236_1     1 0.000
#> lane1_3600STDY6167738_TCAGATTC_L001_17236_1     1 0.000
#> lane1_3600STDY6167739_TACTAGTC_L001_17236_1     1 0.000
#> lane1_3600STDY6167740_TTCAGCTC_L001_17236_1     1 0.000
#> lane1_3600STDY6167741_TGTCTATC_L001_17236_1     1 0.000
#> lane1_3600STDY6167742_TATGTGGC_L001_17236_1     1 0.000
#> lane1_3600STDY6167743_TTACTCGC_L001_17236_1     1 0.000
#> lane1_3600STDY6167744_TCGTTAGC_L001_17236_1     1 0.000
#> lane1_3600STDY6167745_TACCGAGC_L001_17236_1     1 0.000
#> lane1_3600STDY6167746_TGTTCTCC_L001_17236_1     1 0.000
#> lane1_3600STDY6167747_TTCGCACC_L001_17236_1     2 1.000
#> lane1_3600STDY6167748_TTGCGTAC_L001_17236_1     1 0.000
#> lane1_3600STDY6167749_TCTACGAC_L001_17236_1     1 0.000
#> lane1_3600STDY6167750_TGACAGAC_L001_17236_1     1 0.000
#> lane1_3600STDY6167751_TAGAACAC_L001_17236_1     1 0.000
#> lane1_3600STDY6167752_TCATCCTA_L001_17236_1     1 0.000
#> lane1_3600STDY6167753_TGCTGATA_L001_17236_1     1 0.000
#> lane1_3600STDY6167754_TAGACGGA_L001_17236_1     1 0.000
#> lane1_3600STDY6167755_TGTGAAGA_L001_17236_1     1 0.000
#> lane1_3600STDY6167756_TCTCTTCA_L001_17236_1     1 0.000
#> lane1_3600STDY6167757_TTGTTCCA_L001_17236_1     1 0.000
#> lane1_3600STDY6167758_TGAAGCCA_L001_17236_1     2 0.000
#> lane1_3600STDY6167759_TACCACCA_L001_17236_1     1 0.000
#> lane1_3600STDY6167760_TGCGTGAA_L001_17236_1     1 0.000
#> lane1_3600STDY6167761_GGTGAGTT_L001_17236_1     1 0.000
#> lane1_3600STDY6167762_GATCTCTT_L001_17236_1     1 0.000
#> lane1_3600STDY6167763_GTGTCCTT_L001_17236_1     1 0.000
#> lane1_3600STDY6167764_GACGGATT_L001_17236_1     1 0.000
#> lane1_3600STDY6167765_GCAACATT_L001_17236_1     1 0.000
#> lane1_3600STDY6167766_GGTCGTGT_L001_17236_1     1 0.000
#> lane1_3600STDY6167767_GAATCTGT_L001_17236_1     1 0.249
#> lane1_3600STDY6167768_GTACATCT_L001_17236_1     1 0.000
#> lane1_3600STDY6167769_GAGGTGCT_L001_17236_1     1 0.000
#> lane1_3600STDY6167770_GCATGGCT_L001_17236_1     1 0.000
#> lane1_3600STDY6167771_GTTAGCCT_L001_17236_1     1 0.000
#> lane1_3600STDY6167772_GTCGCTAT_L001_17236_1     1 0.000
#> lane1_3600STDY6167773_GGAATGAT_L001_17236_1     1 0.000
#> lane1_3600STDY6167774_GAGCCAAT_L001_17236_1     1 0.000
#> lane1_3600STDY6167775_GCTCCTTG_L001_17236_1     1 0.000
#> lane1_3600STDY6167776_GTAAGGTG_L001_17236_1     2 0.000
#> lane1_3600STDY6167777_GAGGATGG_L001_17236_1     1 0.000
#> lane1_3600STDY6167778_GTTGTCGG_L001_17236_1     2 0.000
#> lane1_3600STDY6167779_GGATTAGG_L001_17236_1     1 0.000
#> lane1_3600STDY6167780_GATAGAGG_L001_17236_1     1 0.000
#> lane1_3600STDY6167781_GTGTGTCG_L001_17236_1     1 0.000
#> lane1_3600STDY6167782_GCAATCCG_L001_17236_1     1 0.000
#> lane1_3600STDY6167783_GACCTTAG_L001_17236_1     1 0.000
#> lane1_3600STDY6167784_GCCTGTTC_L001_17236_1     1 0.000
#> lane1_3600STDY6167785_GCACTGTC_L001_17236_1     1 0.000
#> lane1_3600STDY6167786_GCTAACTC_L001_17236_1     1 0.000
#> lane1_3600STDY6167787_GATTCATC_L001_17236_1     1 0.000
#> lane1_3600STDY6167788_GTCTTGGC_L001_17236_1     2 0.000
#> lane1_3600STDY6167789_GTAGAAGC_L001_17236_1     1 0.000
#> lane1_3600STDY6167790_GATGGTCC_L001_17236_1     1 0.000
#> lane1_3600STDY6167791_GTGCTACC_L001_17236_1     1 0.000
#> lane1_3600STDY6167792_GCGATTAC_L001_17236_1     1 0.000
#> lane1_3600STDY6167793_GGTTGGAC_L001_17236_1     1 0.000
#> lane1_3600STDY6167794_GGCACAAC_L001_17236_1     1 0.000
#> lane1_3600STDY6167795_GACACTTA_L001_17236_1     1 0.000
#> lane1_3600STDY6167796_GTGCAGTA_L001_17236_1     1 0.249
#> lane1_3600STDY6167797_GGAGTCTA_L001_17236_1     1 0.000
#> lane1_3600STDY6167798_GCTATGGA_L001_17236_1     1 0.000
#> lane1_3600STDY6167799_GAGTGCGA_L001_17236_1     1 0.498
#> lane1_3600STDY6167800_GTAACCGA_L001_17236_1     1 0.000
#> lane1_3600STDY6167801_GGCAAGCA_L001_17236_1     1 0.000
#> lane1_3600STDY6167802_GCCTTACA_L001_17236_1     1 0.000
#> lane1_3600STDY6167803_GAACGACA_L001_17236_1     1 0.000
#> lane1_3600STDY6167804_GCAGGTAA_L001_17236_1     1 0.000
#> lane1_3600STDY6167805_GCGTCGAA_L001_17236_1     1 0.000
#> lane1_3600STDY6167806_CGTTCGGT_L001_17236_1     1 0.000
#> lane1_3600STDY6167807_CACCAGGT_L001_17236_1     1 0.000
#> lane1_3600STDY6167808_CTGCGAGT_L001_17236_1     1 0.000
#> lane1_3600STDY6167809_CCGTATCT_L001_17236_1     1 0.000
#> lane1_3600STDY6167810_CGCTTCCT_L001_17236_1     2 1.000
#> lane1_3600STDY6167811_CAAGACCT_L001_17236_1     1 0.000
#> lane1_3600STDY6167812_CACACACT_L001_17236_1     1 0.000
#> lane1_3600STDY6167813_CCTAGTAT_L001_17236_1     2 0.253
#> lane1_3600STDY6167814_CCACCGAT_L001_17236_1     1 0.000
#> lane1_3600STDY6167815_CTTCACAT_L001_17236_1     1 0.000
#> lane1_3600STDY6167816_CTATCATG_L001_17236_1     1 0.000
#> lane1_3600STDY6167817_CATGAATG_L001_17236_1     2 1.000
#> lane1_3600STDY6167818_CCACTTGG_L001_17236_1     1 0.000
#> lane1_3600STDY6167819_CTGTACGG_L001_17236_1     1 0.000
#> lane1_3600STDY6167820_CTAGATAG_L001_17236_1     1 0.000
#> lane1_3600STDY6167821_CACTCGAG_L001_17236_1     2 1.000
#> lane1_3600STDY6167822_CCGACAAG_L001_17236_1     1 0.000
#> lane1_3600STDY6167823_CTTGCTTC_L001_17236_1     1 0.000
#> lane1_3600STDY6167824_CATAGGTC_L001_17236_1     1 0.000
#> lane1_3600STDY6167825_CACATTGC_L001_17236_1     1 0.000
#> lane1_3600STDY6167826_CGCTAAGC_L001_17236_1     1 0.000
#> lane1_3600STDY6167827_CAACCTCC_L001_17236_1     1 0.000
#> lane1_3600STDY6167828_CAGCTGAC_L001_17236_1     1 0.000
#> lane1_3600STDY6167829_CTCAAGAC_L001_17236_1     1 0.000
#> lane1_3600STDY6167830_CGTGTCAC_L001_17236_1     1 0.000
#> lane1_3600STDY6167831_CCATGCAC_L001_17236_1     1 0.000
#> lane1_3600STDY6167832_CGTTACTA_L001_17236_1     1 0.000
#> lane1_3600STDY6167833_CAAGTAGA_L001_17236_1     1 0.000
#> lane1_3600STDY6167834_CTCTCTCA_L001_17236_1     1 0.000
#> lane1_3600STDY6167835_CGACTGCA_L001_17236_1     1 0.000
#> lane1_3600STDY6167836_CCTGAGCA_L001_17236_1     1 0.000
#> lane1_3600STDY6167837_CAGGCTAA_L001_17236_1     1 0.000
#> lane1_3600STDY6167838_CGGAGGAA_L001_17236_1     1 0.000
#> lane1_3600STDY6167839_AGGAGATT_L001_17236_1     1 0.000
#> lane1_3600STDY6167840_AGGCAGCT_L001_17236_1     1 0.000
#> lane1_3600STDY6167841_ACGTTCAT_L001_17236_1     1 0.000
#> lane1_3600STDY6167842_AACGTGTG_L001_17236_1     1 0.000
#> lane1_3600STDY6167843_AGACCGTG_L001_17236_1     1 0.000
#> lane1_3600STDY6167844_ACCTCTGG_L001_17236_1     2 0.000
#> lane1_3600STDY6167845_ATCCTAGG_L001_17236_1     1 0.000
#> lane1_3600STDY6167846_ATCAACCG_L001_17236_1     1 0.000
#> lane1_3600STDY6167847_AGGTCACG_L001_17236_1     2 0.253
#> lane1_3600STDY6167848_ACTGTTAG_L001_17236_1     1 0.000
#> lane1_3600STDY6167849_AAGAGTAG_L001_17236_1     1 0.000
#> lane1_3600STDY6167850_ATTCGGAG_L001_17236_1     1 0.000
#> lane1_3600STDY6167851_ACGCAATC_L001_17236_1     1 0.249
#> lane1_3600STDY6167852_ACAAGTGC_L001_17236_1     1 0.000
#> lane1_3600STDY6167853_ATGGATCC_L001_17236_1     1 0.000
#> lane1_3600STDY6167854_AGAGGACC_L001_17236_1     1 0.000
#> lane1_3600STDY6167855_ATCTCCAC_L001_17236_1     1 0.000
#> lane1_3600STDY6167856_ATTGGCTA_L001_17236_1     1 0.000
#> lane1_3600STDY6167857_AATCCTGA_L001_17236_1     2 0.000
#> lane1_3600STDY6167858_AGGATTCA_L001_17236_1     2 0.000
#> lane1_3600STDY6167859_AACTGGCA_L001_17236_1     1 0.000
#> lane1_3600STDY6167860_ACAACGCA_L001_17236_1     1 0.000
#> lane1_3600STDY6167861_CGGAAACA_L001_17236_1     2 0.000
#> lane1_3600STDY6167862_AATGAATT_L001_17236_1     1 0.000
#> lane1_3600STDY6167863_TAGGACCC_L001_17236_1     1 0.249
#> lane1_3600STDY6167864_TCTCAGTG_L001_17236_1     1 0.000
#> lane1_3600STDY6167865_CATGGGAA_L001_17236_1     1 0.249
#> lane1_3600STDY6167866_CCTAAGAT_L001_17236_1     1 0.000
#> lane1_3600STDY6167867_CTCAGATA_L001_17236_1     1 0.000
#> lane1_3600STDY6167868_CCCATAGG_L001_17236_1     1 0.000
#> lane1_3600STDY6167869_GCTATGAC_L001_17236_1     1 0.000
#> lane1_3600STDY6167870_GCTGTGAA_L001_17236_1     2 0.000
#> lane1_3600STDY6167871_ACCTTCAA_L001_17236_1     2 0.000
#> lane1_3600STDY6167872_ACAAAGCC_L001_17236_1     2 0.000
#> lane1_3600STDY6167873_CAAAACCG_L001_17236_1     2 0.000
#> lane1_3600STDY6167874_GCTGGACA_L001_17236_1     1 0.000
#> lane1_3600STDY6167875_AAGTCGTA_L001_17236_1     1 0.000
#> lane1_3600STDY6167876_CATCCGTA_L001_17236_1     1 0.000
#> lane1_3600STDY6167877_TTGTGTCT_L001_17236_1     1 0.000
#> lane1_3600STDY6167878_TGCTCTAG_L001_17236_1     1 0.000
#> lane1_3600STDY6167879_ACCCAACA_L001_17236_1     2 0.000
#> lane1_3600STDY6167880_CGATCTGA_L001_17236_1     1 0.000
#> lane1_3600STDY6167881_GTTCCACG_L001_17236_1     1 0.000
#> lane1_3600STDY6167882_ACTCTTTC_L001_17236_1     1 0.000
#> lane1_3600STDY6167883_TATTGGAG_L001_17236_1     2 0.000
#> lane1_3600STDY6167884_TAAACATA_L001_17236_1     2 0.000
#> lane1_3600STDY6167885_GTAAGATA_L001_17236_1     2 1.000
#> lane1_3600STDY6167886_TACCGCAA_L001_17236_1     1 0.000
#> lane1_3600STDY6167887_TATCTCCT_L001_17236_1     1 0.000
#> lane1_3600STDY6167888_TGTCATCT_L001_17236_1     1 0.000
#> lane1_3600STDY6167889_ATAGCTCT_L001_17236_1     1 0.000
#> lane1_3600STDY6167890_AGTCCAAC_L001_17236_1     1 0.000
#> lane1_3600STDY6167891_TTTGGGCA_L001_17236_1     1 0.000
#> lane1_3600STDY6167892_TCTGACGC_L001_17236_1     1 0.000
#> lane1_3600STDY6167893_TGTCGACT_L001_17236_1     1 0.000
#> lane1_3600STDY6167894_GTCACGTA_L001_17236_1     1 0.000
#> lane1_3600STDY6167895_TTGAGCGA_L001_17236_1     1 1.000
#> lane1_3600STDY6167896_GAGACATA_L001_17236_1     1 0.000
#> lane1_3600STDY6167897_GTCAAGCT_L001_17236_1     2 1.000
#> lane1_3600STDY6167898_AGCAAGTT_L001_17236_1     2 1.000
#> lane1_3600STDY6167899_GACGCTCA_L001_17236_1     1 0.000
#> lane1_3600STDY6167900_ACGGCAGC_L001_17236_1     2 1.000
#> lane1_3600STDY6167901_AGAACTGA_L001_17236_1     1 0.000
#> lane1_3600STDY6167902_CGCCTTTG_L001_17236_1     1 0.000
#> lane1_3600STDY6167903_TAAGGTCA_L001_17236_1     1 0.000
#> lane1_3600STDY6167904_ACGTTGGC_L001_17236_1     1 0.000
#> lane1_3600STDY6167905_CCAGCTTA_L001_17236_1     1 0.000
#> lane1_3600STDY6167906_GAATCCTA_L001_17236_1     1 0.000
#> lane1_3600STDY6167907_ACTTCGTA_L001_17236_1     1 0.000
#> lane1_3600STDY6167908_TAGTCGGT_L001_17236_1     2 0.000
#> lane1_3600STDY6167909_CGCACGAG_L001_17236_1     1 0.000
#> lane1_3600STDY6167910_ACGTACTA_L001_17236_1     1 0.000
#> lane1_3600STDY6167911_AGCGCCAA_L001_17236_1     1 0.249
#> lane1_3600STDY6167912_GCCTGCCC_L001_17236_1     1 0.000
#> lane1_3600STDY6167913_AGGACGAT_L001_17236_1     1 0.000
#> lane1_3600STDY6167914_CTTGACCG_L001_17236_1     1 0.000
#> lane1_3600STDY6167915_AGGTCTAA_L001_17236_1     1 0.000
#> lane1_3600STDY6167916_CGAGATCC_L001_17236_1     1 0.000
#> lane1_3600STDY6167917_ATTAGCGG_L001_17236_1     1 0.000
#> lane1_3600STDY6167918_GCGCTGAT_L001_17236_1     2 0.000
#> lane1_3600STDY6167919_TGCTGAAC_L001_17236_1     1 0.000
#> lane1_3600STDY6167920_GAGGGCAG_L001_17236_1     2 0.000
#> lane1_3600STDY6167921_GTTTTCAC_L001_17236_1     1 0.000
#> lane1_3600STDY6167922_GAGATGCC_L001_17236_1     1 0.249
#> lane1_3600STDY6167923_TTGAGAAG_L001_17236_1     1 0.000
#> lane1_3600STDY6167924_GCATCCGG_L001_17236_1     1 0.000
#> lane1_3600STDY6167925_GTCACCAG_L001_17236_1     1 0.000
#> lane1_3600STDY6167926_GAGGTCGC_L001_17236_1     2 1.000
#> lane1_3600STDY6167927_AAGGGGTA_L001_17236_1     1 0.000
#> lane1_3600STDY6167928_TTTTACGT_L001_17236_1     1 0.000
#> lane1_3600STDY6167929_TTCCTACA_L001_17236_1     1 0.000
#> lane1_3600STDY6167930_AGTGTAGT_L001_17236_1     1 0.502
#> lane1_3600STDY6167931_GTGGCCAA_L001_17236_1     1 0.000
#> lane1_3600STDY6167932_AAATACTC_L001_17236_1     1 0.249
#> lane1_3600STDY6167933_CACCCGTC_L001_17236_1     1 0.000
#> lane1_3600STDY6167934_TCGTGGTT_L001_17236_1     1 0.000
#> lane1_3600STDY6167935_ACTTGGGG_L001_17236_1     1 0.000
#> lane1_3600STDY6167936_GGCTGCTT_L001_17236_1     1 0.000
#> lane1_3600STDY6167937_CAGGGTCG_L001_17236_1     1 0.000
#> lane1_3600STDY6167938_CTCGTCGA_L001_17236_1     1 0.000
#> lane1_3600STDY6167939_TCTACAGT_L001_17236_1     1 0.000
#> lane1_3600STDY6167940_CTTCTAGA_L001_17236_1     1 0.000
#> lane1_3600STDY6167941_AACGGCTT_L001_17236_1     1 0.000
#> lane1_3600STDY6167942_ATAAGACT_L001_17236_1     1 0.000
#> lane1_3600STDY6167943_GTTTTTCG_L001_17236_1     1 0.000
#> lane1_3600STDY6167944_ATTGGTAT_L001_17236_1     1 0.000
#> lane1_3600STDY6167945_CGCCAGTA_L001_17236_1     1 0.000
#> lane1_3600STDY6167946_AAGCCGAA_L001_17236_1     1 0.000
#> lane1_3600STDY6167947_TGACCCAC_L001_17236_1     1 0.000
#> lane1_3600STDY6167948_ATTGCACA_L001_17236_1     1 0.000
#> lane1_3600STDY6167949_CTTTTGAT_L001_17236_1     1 0.000
#> lane1_3600STDY6167950_TAGCGAGA_L001_17236_1     2 0.000
#> lane1_3600STDY6167951_TTCGCAGG_L001_17236_1     1 0.000
#> lane1_3600STDY6167952_TAGTTATT_L001_17236_1     1 0.000
#> lane1_3600STDY6167953_TCCTCCGA_L001_17236_1     1 0.000
#> lane1_3600STDY6167954_GCGGGTCT_L001_17236_1     1 0.000
#> lane1_3600STDY6167955_GATTCTAT_L001_17236_1     1 0.000
#> lane1_3600STDY6167956_ATGCAAAG_L001_17236_1     1 1.000
#> lane1_3600STDY6167957_GTCTGAGG_L001_17236_1     1 0.000
#> lane1_3600STDY6167958_TCTGGCGA_L001_17236_1     1 0.000
#> lane1_3600STDY6167959_AATTTGCG_L001_17236_1     1 0.000
#> lane1_3600STDY6167960_TGGGTTGG_L001_17236_1     1 0.000
#> lane1_3600STDY6167961_AGTTGAAA_L001_17236_1     1 0.000
#> lane1_3600STDY6167962_GACCGGAA_L001_17236_1     1 0.000
#> lane1_3600STDY6167963_GATCGAAC_L001_17236_1     1 0.000
#> lane1_3600STDY6167964_GTATAGGG_L001_17236_1     1 0.000
#> lane1_3600STDY6167965_GGTAAGAG_L001_17236_1     2 0.000
#> lane1_3600STDY6167966_AGTCCGAT_L001_17236_1     1 0.000
#> lane1_3600STDY6167967_ATACAGGC_L001_17236_1     1 0.000
#> lane1_3600STDY6167968_TGAGACTC_L001_17236_1     1 0.000
#> lane1_3600STDY6167969_ACTCAGGA_L001_17236_1     1 0.000
#> lane1_3600STDY6167970_GTGTCTGA_L001_17236_1     1 0.000
#> lane1_3600STDY6167971_CTTGAATC_L001_17236_1     1 0.000
#> lane1_3600STDY6167972_CCGCATGA_L001_17236_1     1 0.000
#> lane1_3600STDY6167973_AAGTAACA_L001_17236_1     1 0.000
#> lane1_3600STDY6167974_GTGGTACT_L001_17236_1     1 0.000
#> lane1_3600STDY6167975_AGCTGTGC_L001_17236_1     1 0.249
#> lane1_3600STDY6167976_TTACCTTC_L001_17236_1     1 0.000
#> lane1_3600STDY6167977_TCCGGGTA_L001_17236_1     1 0.000
#> lane1_3600STDY6167978_CTACGTAA_L001_17236_1     1 0.000
#> lane1_3600STDY6167979_TCGGACCG_L001_17236_1     1 0.000
#> lane1_3600STDY6167980_ATGCGTCG_L001_17236_1     1 0.000
#> lane1_3600STDY6167981_TTCTTAGC_L001_17236_1     1 0.000
#> lane1_3600STDY6167982_TGAGTAAG_L001_17236_1     1 0.000
#> lane1_3600STDY6167983_AAGTGATA_L001_17236_1     1 0.000
#> lane1_3600STDY6167984_TCGATGCG_L001_17236_1     1 0.000
#> lane1_3600STDY6167985_TATTCTGG_L001_17236_1     1 0.000
#> lane1_3600STDY6167986_AGCCGTGA_L001_17236_1     1 0.000
#> lane1_3600STDY6167987_AAGCCTTC_L001_17236_1     1 0.000
#> lane1_3600STDY6167988_AGGTATCC_L001_17236_1     1 0.000
#> lane1_3600STDY6167989_AGGATCTC_L001_17236_1     2 0.000
#> lane1_3600STDY6167990_CTGTTTGA_L001_17236_1     1 0.000
#> lane1_3600STDY6167991_GGAATTTC_L001_17236_1     1 0.000
#> lane1_3600STDY6167992_TTGGAGCA_L001_17236_1     2 1.000
#> lane1_3600STDY6167993_AAGGTCTG_L001_17236_1     1 0.000
#> lane1_3600STDY6167994_AATTAGGC_L001_17236_1     1 0.000
#> lane1_3600STDY6167995_AATCGGGT_L001_17236_1     1 0.000
#> lane1_3600STDY6167996_AGGTAGAC_L001_17236_1     1 0.000
#> lane1_3600STDY6167997_CTTATTCC_L001_17236_1     1 0.000
#> lane1_3600STDY6167998_CAGGCTCT_L001_17236_1     1 0.000
#> lane1_3600STDY6167999_AAAGCACG_L001_17236_1     1 0.000
#> lane1_3600STDY6168000_GTATACAC_L001_17236_1     1 0.000
#> lane1_3600STDY6168001_GGACATAT_L001_17236_1     1 0.000
#> lane1_3600STDY6168002_CGGTTGGG_L001_17236_1     1 0.000
#> lane1_3600STDY6168003_GTCCGTGA_L001_17236_1     1 0.000
#> lane1_3600STDY6168004_GCCGAACC_L001_17236_1     1 0.253
#> lane1_3600STDY6168005_ACTTTACT_L001_17236_1     1 0.000
#> lane1_3600STDY6168006_GGGTCCAT_L001_17236_1     1 0.000
#> lane1_3600STDY6168007_ATAACTAG_L001_17236_1     1 0.000
#> lane1_3600STDY6168008_AATAGAGA_L001_17236_1     1 0.000
#> lane1_3600STDY6168009_TCACCATT_L001_17236_1     1 0.000
#> lane1_3600STDY6168010_CGCCTGAT_L001_17236_1     1 0.000
#> lane1_3600STDY6168011_GCGTGAAC_L001_17236_1     1 0.000
#> lane1_3600STDY6168012_TAAGGGTG_L001_17236_1     1 0.249
#> lane1_3600STDY6168013_GGTGTCGA_L001_17236_1     1 0.000
#> lane1_3600STDY6168014_CCGTTAGG_L001_17236_1     1 0.000
#> lane1_3600STDY6168015_TGGCAAAA_L001_17236_1     1 0.000
#> lane1_3600STDY6168016_CCTACCCG_L001_17236_1     2 1.000
#> lane1_3600STDY6168017_AACAGCGC_L001_17236_1     1 0.000
#> lane1_3600STDY6168018_TATACATC_L001_17236_1     2 0.000
#> lane1_3600STDY6168019_AAGCGACT_L001_17236_1     1 0.000
#> lane1_3600STDY6168020_GAAGCGCA_L001_17236_1     1 0.000
#> lane1_3600STDY6168021_ACCTCTAC_L001_17236_1     1 0.000
#> lane1_3600STDY6168022_GATTGCGT_L001_17236_1     1 0.000
#> lane1_3600STDY6168023_GCTGGTTG_L001_17236_1     2 0.000
#> lane1_3600STDY6168024_ATCGTCCT_L001_17236_1     1 0.000
#> lane1_3600STDY6168025_GGACACGG_L001_17236_1     1 0.000
#> lane1_3600STDY6168026_CGCACCTA_L001_17236_1     1 0.000
#> lane1_3600STDY6168027_CTTCGGCT_L001_17236_1     1 0.000
#> lane1_3600STDY6168028_CGAATCGA_L001_17236_1     1 0.000
#> lane1_3600STDY6168029_TAACAACT_L001_17236_1     1 0.000
#> lane1_3600STDY6168030_AGCTCTTT_L001_17236_1     1 0.000
#> lane1_3600STDY6168031_TAATCCCT_L001_17236_1     1 0.249
#> lane1_3600STDY6168032_AGGACACT_L001_17236_1     1 0.000
#> lane1_3600STDY6168033_TTACACTA_L001_17236_1     1 0.249
#> lane1_3600STDY6168034_AAACATCA_L001_17236_1     1 0.000
#> lane1_3600STDY6168035_CCATAGCT_L001_17236_1     1 0.000
#> lane1_3600STDY6168036_GTTATGGC_L001_17236_1     1 0.000
#> lane1_3600STDY6168037_ATCCCCTA_L001_17236_1     1 0.000
#> lane1_3600STDY6168038_CATACTAC_L001_17236_1     1 0.000
#> lane1_3600STDY6168039_CAATTGTT_L001_17236_1     1 0.000
#> lane1_3600STDY6168040_AAACCCGT_L001_17236_1     2 0.000
#> lane1_3600STDY6168041_CAGATTTC_L001_17236_1     1 0.000
#> lane1_3600STDY6168042_GCGTAGGT_L001_17236_1     1 0.000
#> lane1_3600STDY6168043_GGCATTCG_L001_17236_1     1 0.498
#> lane1_3600STDY6168044_TGGGGCTT_L001_17236_1     1 0.000
#> lane1_3600STDY6168045_CTGACTAC_L001_17236_1     1 0.000
#> lane1_3600STDY6168046_AACTTTTA_L001_17236_1     1 0.000
#> lane1_3600STDY6168047_AGGGATTC_L001_17236_1     1 0.000
#> lane1_3600STDY6168048_CCGAGTAG_L001_17236_1     1 0.000
#> lane1_3600STDY6168049_GGGGACTA_L001_17236_1     1 0.000
#> lane1_3600STDY6168050_GGAGTTGA_L001_17236_1     1 0.498
#> lane1_3600STDY6168051_AGCTCATC_L001_17236_1     1 0.000
#> lane1_3600STDY6168052_TAATCAAC_L001_17236_1     1 0.000
#> lane1_3600STDY6168053_ACTGGTCG_L001_17236_1     1 0.000
#> lane1_3600STDY6168054_GACGATTG_L001_17236_1     1 0.751
#> lane1_3600STDY6168055_AGCGATGA_L001_17236_1     1 0.000
#> lane1_3600STDY6168056_GAAGAGAT_L001_17236_1     1 0.000
#> lane1_3600STDY6168057_CGTATGCA_L001_17236_1     1 0.000
#> lane1_3600STDY6168058_CACGTGCG_L001_17236_1     1 0.498
#> lane1_3600STDY6168059_GCTTAAAC_L001_17236_1     1 0.000
#> lane1_3600STDY6168060_GTTCCGCA_L001_17236_1     1 0.000
#> lane1_3600STDY6168061_GTATCGTC_L001_17236_1     1 0.249
#> lane1_3600STDY6168062_GTCCTCAC_L001_17236_1     1 0.000
#> lane1_3600STDY6168063_GTACGGAC_L001_17236_1     2 0.000
#> lane1_3600STDY6168064_CATTTTGC_L001_17236_1     2 0.000
#> lane1_3600STDY6168065_TCCTCTCT_L001_17236_1     1 0.249
#> lane1_3600STDY6168066_AGCAACGA_L001_17236_1     1 0.000
#> lane1_3600STDY6168067_ACAGAAGA_L001_17236_1     1 0.498
#> lane1_3600STDY6168068_CGACCCTT_L001_17236_1     1 0.000
#> lane1_3600STDY6168069_CTGCCTAG_L001_17236_1     2 0.000
#> lane1_3600STDY6168070_GAGCGCAT_L001_17236_1     1 0.000
#> lane1_3600STDY6168071_AACTTATC_L001_17236_1     1 0.000
#> lane1_3600STDY6168072_CCGATGTA_L001_17236_1     1 0.000
#> lane1_3600STDY6168073_TTACTACC_L001_17236_1     1 0.000
#> lane1_3600STDY6168074_CAAGGAGC_L001_17236_1     1 0.751
#> lane1_3600STDY6168075_TGGTTGAC_L001_17236_1     2 0.000
#> lane1_3600STDY6168076_ACCTGCTG_L001_17236_1     2 0.000
#> lane4_3600STDY6184181_ATCACGTT_L004_17480_1     2 1.000
#> lane4_3600STDY6184182_CGATGTTT_L004_17480_1     2 0.249
#> lane4_3600STDY6184183_TTAGGCAT_L004_17480_1     1 0.253
#> lane4_3600STDY6184184_TGACCACT_L004_17480_1     2 0.249
#> lane4_3600STDY6184185_ACAGTGGT_L004_17480_1     2 0.249
#> lane4_3600STDY6184186_GCCAATGT_L004_17480_1     2 0.498
#> lane4_3600STDY6184187_CAGATCTG_L004_17480_1     1 0.751
#> lane4_3600STDY6184188_ACTTGATG_L004_17480_1     2 0.000
#> lane4_3600STDY6184189_GATCAGCG_L004_17480_1     2 0.249
#> lane4_3600STDY6184190_TAGCTTGT_L004_17480_1     1 0.498
#> lane4_3600STDY6184191_GGCTACAG_L004_17480_1     1 1.000
#> lane4_3600STDY6184192_CTTGTACT_L004_17480_1     2 0.000
#> lane4_3600STDY6184193_TGGTTGTT_L004_17480_1     2 0.000
#> lane4_3600STDY6184194_TCTCGGTT_L004_17480_1     1 0.502
#> lane4_3600STDY6184195_TAAGCGTT_L004_17480_1     1 0.751
#> lane4_3600STDY6184196_TCCGTCTT_L004_17480_1     2 0.498
#> lane4_3600STDY6184197_TGTACCTT_L004_17480_1     2 0.249
#> lane4_3600STDY6184198_TTCTGTGT_L004_17480_1     2 0.747
#> lane4_3600STDY6184199_TCTGCTGT_L004_17480_1     2 0.249
#> lane4_3600STDY6184200_TTGGAGGT_L004_17480_1     2 0.747
#> lane4_3600STDY6184201_TCGAGCGT_L004_17480_1     1 1.000
#> lane4_3600STDY6184202_TGATACGT_L004_17480_1     1 0.502
#> lane4_3600STDY6184203_TGCATAGT_L004_17480_1     2 0.751
#> lane4_3600STDY6184204_TTGACTCT_L004_17480_1     2 1.000
#> lane4_3600STDY6184205_TGCGATCT_L004_17480_1     2 0.249
#> lane4_3600STDY6184206_TTCCTGCT_L004_17480_1     2 0.000
#> lane4_3600STDY6184207_TAGTGACT_L004_17480_1     1 0.751
#> lane4_3600STDY6184208_TACAGGAT_L004_17480_1     2 0.249
#> lane4_3600STDY6184209_TCCTCAAT_L004_17480_1     2 0.498
#> lane4_3600STDY6184210_TGTGGTTG_L004_17480_1     2 0.000
#> lane4_3600STDY6184211_TAGTCTTG_L004_17480_1     2 0.751
#> lane4_3600STDY6184212_TTCCATTG_L004_17480_1     2 0.000
#> lane4_3600STDY6184213_TCGAAGTG_L004_17480_1     2 0.000
#> lane4_3600STDY6184214_TAACGCTG_L004_17480_1     2 0.249
#> lane4_3600STDY6184215_TTGGTATG_L004_17480_1     2 0.000
#> lane4_3600STDY6184216_TGAACTGG_L004_17480_1     2 0.000
#> lane4_3600STDY6184217_TACTTCGG_L004_17480_1     2 0.000
#> lane4_3600STDY6184218_TCTCACGG_L004_17480_1     2 0.000
#> lane4_3600STDY6184219_TCAGGAGG_L004_17480_1     2 0.000
#> lane4_3600STDY6184220_TAAGTTCG_L004_17480_1     2 0.000
#> lane4_3600STDY6184221_TCCAGTCG_L004_17480_1     2 0.000
#> lane4_3600STDY6184222_TGTATGCG_L004_17480_1     2 0.502
#> lane4_3600STDY6184223_TCATTGAG_L004_17480_1     2 0.000
#> lane4_3600STDY6184224_TGGCTCAG_L004_17480_1     2 0.249
#> lane4_3600STDY6184225_TATGCCAG_L004_17480_1     2 0.000
#> lane4_3600STDY6184226_TCAGATTC_L004_17480_1     2 0.000
#> lane4_3600STDY6184227_TACTAGTC_L004_17480_1     2 0.000
#> lane4_3600STDY6184228_TTCAGCTC_L004_17480_1     2 0.249
#> lane4_3600STDY6184229_TGTCTATC_L004_17480_1     2 0.498
#> lane4_3600STDY6184230_TATGTGGC_L004_17480_1     2 0.000
#> lane4_3600STDY6184231_TTACTCGC_L004_17480_1     2 0.249
#> lane4_3600STDY6184232_TCGTTAGC_L004_17480_1     2 0.000
#> lane4_3600STDY6184233_TACCGAGC_L004_17480_1     2 0.000
#> lane4_3600STDY6184234_TGTTCTCC_L004_17480_1     2 0.498
#> lane4_3600STDY6184235_TTCGCACC_L004_17480_1     2 0.498
#> lane4_3600STDY6184236_TTGCGTAC_L004_17480_1     2 0.249
#> lane4_3600STDY6184237_TCTACGAC_L004_17480_1     2 0.000
#> lane4_3600STDY6184238_TGACAGAC_L004_17480_1     2 0.249
#> lane4_3600STDY6184239_TAGAACAC_L004_17480_1     2 0.498
#> lane4_3600STDY6184240_TCATCCTA_L004_17480_1     2 0.000
#> lane4_3600STDY6184241_TGCTGATA_L004_17480_1     2 0.000
#> lane4_3600STDY6184242_TAGACGGA_L004_17480_1     2 0.249
#> lane4_3600STDY6184243_TGTGAAGA_L004_17480_1     2 0.498
#> lane4_3600STDY6184244_TCTCTTCA_L004_17480_1     2 0.000
#> lane4_3600STDY6184245_TTGTTCCA_L004_17480_1     2 1.000
#> lane4_3600STDY6184246_TGAAGCCA_L004_17480_1     2 0.000
#> lane4_3600STDY6184247_TACCACCA_L004_17480_1     2 0.000
#> lane4_3600STDY6184248_TGCGTGAA_L004_17480_1     2 0.502
#> lane4_3600STDY6184249_GGTGAGTT_L004_17480_1     2 0.000
#> lane4_3600STDY6184250_GATCTCTT_L004_17480_1     2 0.000
#> lane4_3600STDY6184251_GTGTCCTT_L004_17480_1     2 0.000
#> lane4_3600STDY6184252_GACGGATT_L004_17480_1     2 0.000
#> lane4_3600STDY6184253_GCAACATT_L004_17480_1     2 0.249
#> lane4_3600STDY6184254_GGTCGTGT_L004_17480_1     2 0.747
#> lane4_3600STDY6184255_GAATCTGT_L004_17480_1     2 0.000
#> lane4_3600STDY6184256_GTACATCT_L004_17480_1     2 0.000
#> lane4_3600STDY6184257_GAGGTGCT_L004_17480_1     2 0.000
#> lane4_3600STDY6184258_GCATGGCT_L004_17480_1     2 0.000
#> lane4_3600STDY6184259_GTTAGCCT_L004_17480_1     2 0.249
#> lane4_3600STDY6184260_GTCGCTAT_L004_17480_1     2 0.000
#> lane4_3600STDY6184261_GGAATGAT_L004_17480_1     2 0.000
#> lane4_3600STDY6184262_GAGCCAAT_L004_17480_1     2 0.000
#> lane4_3600STDY6184263_GCTCCTTG_L004_17480_1     2 0.249
#> lane4_3600STDY6184264_GTAAGGTG_L004_17480_1     2 0.000
#> lane4_3600STDY6184265_GAGGATGG_L004_17480_1     2 0.249
#> lane4_3600STDY6184266_GTTGTCGG_L004_17480_1     2 0.000
#> lane4_3600STDY6184267_GGATTAGG_L004_17480_1     2 0.000
#> lane4_3600STDY6184268_GATAGAGG_L004_17480_1     2 0.249
#> lane4_3600STDY6184269_GTGTGTCG_L004_17480_1     2 0.751
#> lane4_3600STDY6184270_GCAATCCG_L004_17480_1     2 0.000
#> lane4_3600STDY6184271_GACCTTAG_L004_17480_1     2 0.000
#> lane4_3600STDY6184272_GCCTGTTC_L004_17480_1     2 0.000
#> lane4_3600STDY6184273_GCACTGTC_L004_17480_1     2 1.000
#> lane4_3600STDY6184274_GCTAACTC_L004_17480_1     2 0.000
#> lane4_3600STDY6184275_GATTCATC_L004_17480_1     2 1.000
#> lane4_3600STDY6184276_GTCTTGGC_L004_17480_1     1 0.249
#> lane4_3600STDY6184277_GTAGAAGC_L004_17480_1     2 0.498
#> lane4_3600STDY6184278_GATGGTCC_L004_17480_1     2 0.000
#> lane4_3600STDY6184279_GTGCTACC_L004_17480_1     2 0.000
#> lane4_3600STDY6184280_GCGATTAC_L004_17480_1     2 0.000
#> lane4_3600STDY6184281_GGTTGGAC_L004_17480_1     2 0.747
#> lane4_3600STDY6184282_GGCACAAC_L004_17480_1     2 0.253
#> lane4_3600STDY6184283_GACACTTA_L004_17480_1     2 0.000
#> lane4_3600STDY6184284_GTGCAGTA_L004_17480_1     2 0.498
#> lane4_3600STDY6184285_GGAGTCTA_L004_17480_1     2 0.000
#> lane4_3600STDY6184286_GCTATGGA_L004_17480_1     2 0.249
#> lane4_3600STDY6184287_GAGTGCGA_L004_17480_1     2 0.249
#> lane4_3600STDY6184288_GTAACCGA_L004_17480_1     2 0.000
#> lane4_3600STDY6184289_GGCAAGCA_L004_17480_1     2 0.000
#> lane4_3600STDY6184290_GCCTTACA_L004_17480_1     2 0.000
#> lane4_3600STDY6184291_GAACGACA_L004_17480_1     2 0.000
#> lane4_3600STDY6184292_GCAGGTAA_L004_17480_1     2 0.000
#> lane4_3600STDY6184293_GCGTCGAA_L004_17480_1     2 0.249
#> lane4_3600STDY6184294_CGTTCGGT_L004_17480_1     2 0.253
#> lane4_3600STDY6184295_CACCAGGT_L004_17480_1     2 0.249
#> lane4_3600STDY6184296_CTGCGAGT_L004_17480_1     2 0.000
#> lane4_3600STDY6184297_CCGTATCT_L004_17480_1     2 0.249
#> lane4_3600STDY6184298_CGCTTCCT_L004_17480_1     2 1.000
#> lane4_3600STDY6184299_CAAGACCT_L004_17480_1     2 0.000
#> lane4_3600STDY6184300_CACACACT_L004_17480_1     2 0.747
#> lane4_3600STDY6184301_CCTAGTAT_L004_17480_1     2 0.249
#> lane4_3600STDY6184302_CCACCGAT_L004_17480_1     2 0.747
#> lane4_3600STDY6184303_CTTCACAT_L004_17480_1     2 0.249
#> lane4_3600STDY6184304_CTATCATG_L004_17480_1     2 0.249
#> lane4_3600STDY6184305_CATGAATG_L004_17480_1     2 0.000
#> lane4_3600STDY6184306_CCACTTGG_L004_17480_1     2 0.000
#> lane4_3600STDY6184307_CTGTACGG_L004_17480_1     2 0.000
#> lane4_3600STDY6184308_CTAGATAG_L004_17480_1     2 0.000
#> lane4_3600STDY6184309_CACTCGAG_L004_17480_1     2 0.000
#> lane4_3600STDY6184310_CCGACAAG_L004_17480_1     2 0.000
#> lane4_3600STDY6184311_CTTGCTTC_L004_17480_1     2 0.498
#> lane4_3600STDY6184312_CATAGGTC_L004_17480_1     2 0.502
#> lane4_3600STDY6184313_CACATTGC_L004_17480_1     2 0.498
#> lane4_3600STDY6184314_CGCTAAGC_L004_17480_1     2 1.000
#> lane4_3600STDY6184315_CAACCTCC_L004_17480_1     2 0.000
#> lane4_3600STDY6184316_CAGCTGAC_L004_17480_1     2 0.249
#> lane4_3600STDY6184317_CTCAAGAC_L004_17480_1     2 0.249
#> lane4_3600STDY6184318_CGTGTCAC_L004_17480_1     2 0.000
#> lane4_3600STDY6184319_CCATGCAC_L004_17480_1     2 0.000
#> lane4_3600STDY6184320_CGTTACTA_L004_17480_1     2 0.498
#> lane4_3600STDY6184321_CAAGTAGA_L004_17480_1     2 1.000
#> lane4_3600STDY6184322_CTCTCTCA_L004_17480_1     2 0.000
#> lane4_3600STDY6184323_CGACTGCA_L004_17480_1     2 0.000
#> lane4_3600STDY6184324_CCTGAGCA_L004_17480_1     2 0.502
#> lane4_3600STDY6184325_CAGGCTAA_L004_17480_1     2 0.249
#> lane4_3600STDY6184326_CGGAGGAA_L004_17480_1     2 0.000
#> lane4_3600STDY6184327_AGGAGATT_L004_17480_1     2 0.000
#> lane4_3600STDY6184328_AGGCAGCT_L004_17480_1     2 0.000
#> lane4_3600STDY6184329_ACGTTCAT_L004_17480_1     1 0.502
#> lane4_3600STDY6184330_AACGTGTG_L004_17480_1     2 0.000
#> lane4_3600STDY6184331_AGACCGTG_L004_17480_1     2 0.000
#> lane4_3600STDY6184332_ACCTCTGG_L004_17480_1     2 0.498
#> lane4_3600STDY6184333_ATCCTAGG_L004_17480_1     2 0.000
#> lane4_3600STDY6184334_ATCAACCG_L004_17480_1     2 0.000
#> lane4_3600STDY6184335_AGGTCACG_L004_17480_1     2 0.000
#> lane4_3600STDY6184336_ACTGTTAG_L004_17480_1     2 0.000
#> lane4_3600STDY6184337_AAGAGTAG_L004_17480_1     2 0.498
#> lane4_3600STDY6184338_ATTCGGAG_L004_17480_1     2 0.498
#> lane4_3600STDY6184339_ACGCAATC_L004_17480_1     2 0.249
#> lane4_3600STDY6184340_ACAAGTGC_L004_17480_1     2 0.249
#> lane4_3600STDY6184341_ATGGATCC_L004_17480_1     2 0.249
#> lane4_3600STDY6184342_AGAGGACC_L004_17480_1     2 1.000
#> lane4_3600STDY6184343_ATCTCCAC_L004_17480_1     2 1.000
#> lane4_3600STDY6184344_ATTGGCTA_L004_17480_1     2 0.249
#> lane4_3600STDY6184345_AATCCTGA_L004_17480_1     2 0.000
#> lane4_3600STDY6184346_AGGATTCA_L004_17480_1     2 0.000
#> lane4_3600STDY6184347_AACTGGCA_L004_17480_1     2 0.000
#> lane4_3600STDY6184348_ACAACGCA_L004_17480_1     2 0.747
#> lane4_3600STDY6184349_CGGAAACA_L004_17480_1     1 0.751
#> lane4_3600STDY6184350_AATGAATT_L004_17480_1     2 0.498
#> lane4_3600STDY6184351_TAGGACCC_L004_17480_1     2 0.751
#> lane4_3600STDY6184352_TCTCAGTG_L004_17480_1     2 0.000
#> lane4_3600STDY6184353_CATGGGAA_L004_17480_1     2 0.000
#> lane4_3600STDY6184354_CCTAAGAT_L004_17480_1     2 0.498
#> lane4_3600STDY6184355_CTCAGATA_L004_17480_1     2 1.000
#> lane4_3600STDY6184356_CCCATAGG_L004_17480_1     2 1.000
#> lane4_3600STDY6184357_GCTATGAC_L004_17480_1     2 0.000
#> lane4_3600STDY6184358_GCTGTGAA_L004_17480_1     2 0.249
#> lane4_3600STDY6184359_ACCTTCAA_L004_17480_1     2 0.000
#> lane4_3600STDY6184360_ACAAAGCC_L004_17480_1     2 0.000
#> lane4_3600STDY6184361_CAAAACCG_L004_17480_1     2 0.253
#> lane4_3600STDY6184362_GCTGGACA_L004_17480_1     2 0.000
#> lane4_3600STDY6184363_AAGTCGTA_L004_17480_1     2 0.249
#> lane4_3600STDY6184364_CATCCGTA_L004_17480_1     2 0.000
#> lane4_3600STDY6184365_TTGTGTCT_L004_17480_1     2 0.000
#> lane4_3600STDY6184366_TGCTCTAG_L004_17480_1     2 1.000
#> lane4_3600STDY6184367_ACCCAACA_L004_17480_1     2 1.000
#> lane4_3600STDY6184368_CGATCTGA_L004_17480_1     2 0.751
#> lane4_3600STDY6184369_GTTCCACG_L004_17480_1     2 0.000
#> lane4_3600STDY6184370_ACTCTTTC_L004_17480_1     2 0.747
#> lane4_3600STDY6184371_TATTGGAG_L004_17480_1     2 0.000
#> lane4_3600STDY6184372_TAAACATA_L004_17480_1     2 0.000
#> lane4_3600STDY6184373_GTAAGATA_L004_17480_1     2 0.000
#> lane4_3600STDY6184374_TACCGCAA_L004_17480_1     1 0.000
#> lane4_3600STDY6184375_TATCTCCT_L004_17480_1     1 0.498
#> lane4_3600STDY6184376_TGTCATCT_L004_17480_1     1 1.000
#> lane4_3600STDY6184377_ATAGCTCT_L004_17480_1     2 0.747
#> lane4_3600STDY6184378_AGTCCAAC_L004_17480_1     1 0.751
#> lane4_3600STDY6184379_TTTGGGCA_L004_17480_1     1 1.000
#> lane4_3600STDY6184380_TCTGACGC_L004_17480_1     1 0.000
#> lane4_3600STDY6184381_TGTCGACT_L004_17480_1     1 0.502
#> lane4_3600STDY6184382_GTCACGTA_L004_17480_1     1 1.000
#> lane4_3600STDY6184383_TTGAGCGA_L004_17480_1     1 1.000
#> lane4_3600STDY6184384_GAGACATA_L004_17480_1     1 0.502
#> lane4_3600STDY6184385_GTCAAGCT_L004_17480_1     1 0.000
#> lane4_3600STDY6184386_AGCAAGTT_L004_17480_1     1 0.249
#> lane4_3600STDY6184387_GACGCTCA_L004_17480_1     2 0.000
#> lane4_3600STDY6184388_ACGGCAGC_L004_17480_1     2 0.000
#> lane4_3600STDY6184389_AGAACTGA_L004_17480_1     2 0.000
#> lane4_3600STDY6184390_CGCCTTTG_L004_17480_1     2 0.000
#> lane4_3600STDY6184391_TAAGGTCA_L004_17480_1     2 0.000
#> lane4_3600STDY6184392_ACGTTGGC_L004_17480_1     2 0.000
#> lane4_3600STDY6184393_CCAGCTTA_L004_17480_1     2 0.000
#> lane4_3600STDY6184394_GAATCCTA_L004_17480_1     2 0.000
#> lane4_3600STDY6184395_ACTTCGTA_L004_17480_1     2 0.249
#> lane4_3600STDY6184396_TAGTCGGT_L004_17480_1     1 0.000
#> lane4_3600STDY6184397_CGCACGAG_L004_17480_1     2 0.751
#> lane4_3600STDY6184398_ACGTACTA_L004_17480_1     1 1.000
#> lane4_3600STDY6184399_AGCGCCAA_L004_17480_1     1 0.502
#> lane4_3600STDY6184400_GCCTGCCC_L004_17480_1     2 0.249
#> lane4_3600STDY6184401_AGGACGAT_L004_17480_1     2 1.000
#> lane4_3600STDY6184402_CTTGACCG_L004_17480_1     2 0.249
#> lane4_3600STDY6184403_AGGTCTAA_L004_17480_1     2 1.000
#> lane4_3600STDY6184404_CGAGATCC_L004_17480_1     1 0.751
#> lane4_3600STDY6184405_ATTAGCGG_L004_17480_1     1 1.000
#> lane4_3600STDY6184406_GCGCTGAT_L004_17480_1     1 0.502
#> lane4_3600STDY6184407_TGCTGAAC_L004_17480_1     1 0.000
#> lane4_3600STDY6184408_GAGGGCAG_L004_17480_1     2 0.502
#> lane4_3600STDY6184409_GTTTTCAC_L004_17480_1     2 0.498
#> lane4_3600STDY6184410_GAGATGCC_L004_17480_1     2 0.751
#> lane4_3600STDY6184411_TTGAGAAG_L004_17480_1     2 0.747
#> lane4_3600STDY6184412_GCATCCGG_L004_17480_1     2 0.000
#> lane4_3600STDY6184413_GTCACCAG_L004_17480_1     2 0.249
#> lane4_3600STDY6184414_GAGGTCGC_L004_17480_1     2 0.000
#> lane4_3600STDY6184415_AAGGGGTA_L004_17480_1     2 0.000
#> lane4_3600STDY6184416_TTTTACGT_L004_17480_1     2 0.000
#> lane4_3600STDY6184417_TTCCTACA_L004_17480_1     2 0.000
#> lane4_3600STDY6184418_AGTGTAGT_L004_17480_1     2 0.000
#> lane4_3600STDY6184419_GTGGCCAA_L004_17480_1     2 0.249
#> lane4_3600STDY6184420_AAATACTC_L004_17480_1     1 1.000
#> lane4_3600STDY6184421_CACCCGTC_L004_17480_1     1 0.502
#> lane4_3600STDY6184422_TCGTGGTT_L004_17480_1     1 1.000
#> lane4_3600STDY6184423_ACTTGGGG_L004_17480_1     2 0.000
#> lane4_3600STDY6184424_GGCTGCTT_L004_17480_1     1 1.000
#> lane4_3600STDY6184425_CAGGGTCG_L004_17480_1     1 1.000
#> lane4_3600STDY6184426_CTCGTCGA_L004_17480_1     2 0.249
#> lane4_3600STDY6184427_TCTACAGT_L004_17480_1     1 0.000
#> lane4_3600STDY6184428_CTTCTAGA_L004_17480_1     1 0.000
#> lane4_3600STDY6184429_AACGGCTT_L004_17480_1     1 1.000
#> lane4_3600STDY6184430_ATAAGACT_L004_17480_1     1 0.751
#> lane4_3600STDY6184431_GTTTTTCG_L004_17480_1     1 0.000
#> lane4_3600STDY6184432_ATTGGTAT_L004_17480_1     1 0.502
#> lane4_3600STDY6184433_CGCCAGTA_L004_17480_1     2 0.000
#> lane4_3600STDY6184434_AAGCCGAA_L004_17480_1     2 0.000
#> lane4_3600STDY6184435_TGACCCAC_L004_17480_1     2 0.249
#> lane4_3600STDY6184436_ATTGCACA_L004_17480_1     2 0.000
#> lane4_3600STDY6184437_CTTTTGAT_L004_17480_1     2 0.249
#> lane4_3600STDY6184438_TAGCGAGA_L004_17480_1     2 0.000
#> lane4_3600STDY6184439_TTCGCAGG_L004_17480_1     2 0.000
#> lane4_3600STDY6184440_TAGTTATT_L004_17480_1     2 0.000
#> lane4_3600STDY6184441_TCCTCCGA_L004_17480_1     2 0.000
#> lane4_3600STDY6184442_GCGGGTCT_L004_17480_1     2 0.000
#> lane4_3600STDY6184443_GATTCTAT_L004_17480_1     2 0.000
#> lane4_3600STDY6184444_ATGCAAAG_L004_17480_1     1 0.502
#> lane4_3600STDY6184445_GTCTGAGG_L004_17480_1     2 0.000
#> lane4_3600STDY6184446_TCTGGCGA_L004_17480_1     2 0.498
#> lane4_3600STDY6184447_AATTTGCG_L004_17480_1     2 0.249
#> lane4_3600STDY6184448_TGGGTTGG_L004_17480_1     2 0.502
#> lane4_3600STDY6184449_AGTTGAAA_L004_17480_1     2 0.000
#> lane4_3600STDY6184450_GACCGGAA_L004_17480_1     2 0.000
#> lane4_3600STDY6184451_GATCGAAC_L004_17480_1     2 0.751
#> lane4_3600STDY6184452_GTATAGGG_L004_17480_1     2 0.000
#> lane4_3600STDY6184453_GGTAAGAG_L004_17480_1     2 0.249
#> lane4_3600STDY6184454_AGTCCGAT_L004_17480_1     1 1.000
#> lane4_3600STDY6184455_ATACAGGC_L004_17480_1     2 0.498
#> lane4_3600STDY6184456_TGAGACTC_L004_17480_1     2 0.751
#> lane4_3600STDY6184457_ACTCAGGA_L004_17480_1     2 1.000
#> lane4_3600STDY6184458_GTGTCTGA_L004_17480_1     2 0.000
#> lane4_3600STDY6184459_CTTGAATC_L004_17480_1     2 0.000
#> lane4_3600STDY6184460_CCGCATGA_L004_17480_1     2 0.000
#> lane4_3600STDY6184461_AAGTAACA_L004_17480_1     2 1.000
#> lane4_3600STDY6184462_GTGGTACT_L004_17480_1     2 0.249
#> lane4_3600STDY6184463_AGCTGTGC_L004_17480_1     2 0.000
#> lane4_3600STDY6184464_TTACCTTC_L004_17480_1     2 0.000
#> lane4_3600STDY6184465_TCCGGGTA_L004_17480_1     2 0.000
#> lane4_3600STDY6184466_CTACGTAA_L004_17480_1     2 0.000
#> lane4_3600STDY6184467_TCGGACCG_L004_17480_1     2 0.000
#> lane4_3600STDY6184468_ATGCGTCG_L004_17480_1     1 0.751
#> lane4_3600STDY6184469_TTCTTAGC_L004_17480_1     2 1.000
#> lane4_3600STDY6184470_TGAGTAAG_L004_17480_1     2 0.249
#> lane4_3600STDY6184471_AAGTGATA_L004_17480_1     2 0.000
#> lane4_3600STDY6184472_TCGATGCG_L004_17480_1     2 0.249
#> lane4_3600STDY6184473_TATTCTGG_L004_17480_1     2 1.000
#> lane4_3600STDY6184474_AGCCGTGA_L004_17480_1     2 0.000
#> lane4_3600STDY6184475_AAGCCTTC_L004_17480_1     2 1.000
#> lane4_3600STDY6184476_AGGTATCC_L004_17480_1     2 0.249
#> lane4_3600STDY6184477_AGGATCTC_L004_17480_1     2 0.498
#> lane4_3600STDY6184478_CTGTTTGA_L004_17480_1     2 0.000
#> lane4_3600STDY6184479_GGAATTTC_L004_17480_1     2 0.000
#> lane4_3600STDY6184480_TTGGAGCA_L004_17480_1     2 0.249
#> lane4_3600STDY6184481_AAGGTCTG_L004_17480_1     2 0.000
#> lane4_3600STDY6184482_AATTAGGC_L004_17480_1     2 0.000
#> lane4_3600STDY6184483_AATCGGGT_L004_17480_1     2 0.249
#> lane4_3600STDY6184484_AGGTAGAC_L004_17480_1     2 0.000
#> lane4_3600STDY6184485_CTTATTCC_L004_17480_1     2 0.000
#> lane4_3600STDY6184486_CAGGCTCT_L004_17480_1     2 0.000
#> lane4_3600STDY6184487_AAAGCACG_L004_17480_1     2 0.249
#> lane4_3600STDY6184488_GTATACAC_L004_17480_1     2 0.000
#> lane4_3600STDY6184489_GGACATAT_L004_17480_1     2 0.000
#> lane4_3600STDY6184490_CGGTTGGG_L004_17480_1     2 0.000
#> lane4_3600STDY6184491_GTCCGTGA_L004_17480_1     2 0.747
#> lane4_3600STDY6184492_GCCGAACC_L004_17480_1     2 1.000
#> lane4_3600STDY6184493_ACTTTACT_L004_17480_1     1 1.000
#> lane4_3600STDY6184494_GGGTCCAT_L004_17480_1     1 0.751
#> lane4_3600STDY6184495_ATAACTAG_L004_17480_1     2 0.249
#> lane4_3600STDY6184496_AATAGAGA_L004_17480_1     2 0.249
#> lane4_3600STDY6184497_TCACCATT_L004_17480_1     2 0.249
#> lane4_3600STDY6184498_CGCCTGAT_L004_17480_1     2 0.000
#> lane4_3600STDY6184499_GCGTGAAC_L004_17480_1     2 0.000
#> lane4_3600STDY6184500_TAAGGGTG_L004_17480_1     2 0.000
#> lane4_3600STDY6184501_GGTGTCGA_L004_17480_1     2 1.000
#> lane4_3600STDY6184502_CCGTTAGG_L004_17480_1     2 1.000
#> lane4_3600STDY6184503_TGGCAAAA_L004_17480_1     2 0.249
#> lane4_3600STDY6184504_CCTACCCG_L004_17480_1     2 0.751
#> lane4_3600STDY6184505_AACAGCGC_L004_17480_1     2 0.751
#> lane4_3600STDY6184506_TATACATC_L004_17480_1     2 1.000
#> lane4_3600STDY6184507_AAGCGACT_L004_17480_1     2 0.000
#> lane4_3600STDY6184508_GAAGCGCA_L004_17480_1     2 0.000
#> lane4_3600STDY6184509_ACCTCTAC_L004_17480_1     2 0.000
#> lane4_3600STDY6184510_GATTGCGT_L004_17480_1     2 0.000
#> lane4_3600STDY6184511_GCTGGTTG_L004_17480_1     2 0.000
#> lane4_3600STDY6184512_ATCGTCCT_L004_17480_1     2 0.000
#> lane4_3600STDY6184513_GGACACGG_L004_17480_1     2 0.000
#> lane4_3600STDY6184514_CGCACCTA_L004_17480_1     2 0.000
#> lane4_3600STDY6184515_CTTCGGCT_L004_17480_1     2 0.000
#> lane4_3600STDY6184516_CGAATCGA_L004_17480_1     1 0.253
#> lane4_3600STDY6184517_TAACAACT_L004_17480_1     2 0.502
#> lane4_3600STDY6184518_AGCTCTTT_L004_17480_1     1 0.000
#> lane4_3600STDY6184519_TAATCCCT_L004_17480_1     2 0.249
#> lane4_3600STDY6184520_AGGACACT_L004_17480_1     2 0.751
#> lane4_3600STDY6184521_TTACACTA_L004_17480_1     2 0.000
#> lane4_3600STDY6184522_AAACATCA_L004_17480_1     2 0.249
#> lane4_3600STDY6184523_CCATAGCT_L004_17480_1     2 1.000
#> lane4_3600STDY6184524_GTTATGGC_L004_17480_1     2 0.498
#> lane4_3600STDY6184525_ATCCCCTA_L004_17480_1     2 0.498
#> lane4_3600STDY6184526_CATACTAC_L004_17480_1     2 0.249
#> lane4_3600STDY6184527_CAATTGTT_L004_17480_1     2 0.502
#> lane4_3600STDY6184528_AAACCCGT_L004_17480_1     1 0.249
#> lane4_3600STDY6184529_CAGATTTC_L004_17480_1     2 0.249
#> lane4_3600STDY6184530_GCGTAGGT_L004_17480_1     2 0.747
#> lane4_3600STDY6184531_GGCATTCG_L004_17480_1     2 0.502
#> lane4_3600STDY6184532_TGGGGCTT_L004_17480_1     2 0.498
#> lane4_3600STDY6184533_CTGACTAC_L004_17480_1     2 0.249
#> lane4_3600STDY6184534_AACTTTTA_L004_17480_1     2 0.249
#> lane4_3600STDY6184535_AGGGATTC_L004_17480_1     2 0.000
#> lane4_3600STDY6184536_CCGAGTAG_L004_17480_1     2 0.000
#> lane4_3600STDY6184537_GGGGACTA_L004_17480_1     2 0.751
#> lane4_3600STDY6184538_GGAGTTGA_L004_17480_1     2 0.498
#> lane4_3600STDY6184539_AGCTCATC_L004_17480_1     2 0.000
#> lane4_3600STDY6184540_TAATCAAC_L004_17480_1     2 1.000
#> lane4_3600STDY6184541_ACTGGTCG_L004_17480_1     2 1.000
#> lane4_3600STDY6184542_GACGATTG_L004_17480_1     2 0.498
#> lane4_3600STDY6184543_AGCGATGA_L004_17480_1     2 1.000
#> lane4_3600STDY6184544_GAAGAGAT_L004_17480_1     2 1.000
#> lane4_3600STDY6184545_CGTATGCA_L004_17480_1     2 0.751
#> lane4_3600STDY6184546_CACGTGCG_L004_17480_1     2 1.000
#> lane4_3600STDY6184547_GCTTAAAC_L004_17480_1     1 0.502
#> lane4_3600STDY6184548_GTTCCGCA_L004_17480_1     2 0.000
#> lane4_3600STDY6184549_GTATCGTC_L004_17480_1     2 1.000
#> lane4_3600STDY6184550_GTCCTCAC_L004_17480_1     1 0.000
#> lane4_3600STDY6184551_GTACGGAC_L004_17480_1     2 0.000
#> lane4_3600STDY6184552_CATTTTGC_L004_17480_1     2 0.000
#> lane4_3600STDY6184553_TCCTCTCT_L004_17480_1     2 0.249
#> lane4_3600STDY6184554_AGCAACGA_L004_17480_1     2 0.249
#> lane4_3600STDY6184555_ACAGAAGA_L004_17480_1     2 0.498
#> lane4_3600STDY6184556_CGACCCTT_L004_17480_1     2 0.000
#> lane4_3600STDY6184557_CTGCCTAG_L004_17480_1     2 0.000
#> lane4_3600STDY6184558_GAGCGCAT_L004_17480_1     2 0.000
#> lane4_3600STDY6184559_AACTTATC_L004_17480_1     2 0.498
#> lane4_3600STDY6184560_CCGATGTA_L004_17480_1     2 0.000
#> lane4_3600STDY6184561_TTACTACC_L004_17480_1     2 0.000
#> lane4_3600STDY6184562_CAAGGAGC_L004_17480_1     2 0.000
#> lane4_3600STDY6184563_TGGTTGAC_L004_17480_1     2 0.000
#> lane4_3600STDY6184564_ACCTGCTG_L004_17480_1     2 0.000
#> lane1_3600STDY6183797_ATCACGTT_L001_17592_1     2 0.000
#> lane1_3600STDY6183798_CGATGTTT_L001_17592_1     1 0.498
#> lane1_3600STDY6183799_TTAGGCAT_L001_17592_1     1 1.000
#> lane1_3600STDY6183800_TGACCACT_L001_17592_1     1 0.498
#> lane1_3600STDY6183801_ACAGTGGT_L001_17592_1     1 1.000
#> lane1_3600STDY6183802_GCCAATGT_L001_17592_1     1 1.000
#> lane1_3600STDY6183803_CAGATCTG_L001_17592_1     1 1.000
#> lane1_3600STDY6183804_ACTTGATG_L001_17592_1     1 1.000
#> lane1_3600STDY6183805_GATCAGCG_L001_17592_1     1 0.249
#> lane1_3600STDY6183806_TAGCTTGT_L001_17592_1     1 0.498
#> lane1_3600STDY6183807_GGCTACAG_L001_17592_1     1 0.249
#> lane1_3600STDY6183808_CTTGTACT_L001_17592_1     2 0.000
#> lane1_3600STDY6183809_TGGTTGTT_L001_17592_1     2 0.000
#> lane1_3600STDY6183810_TCTCGGTT_L001_17592_1     2 0.000
#> lane1_3600STDY6183811_TAAGCGTT_L001_17592_1     1 0.249
#> lane1_3600STDY6183812_TCCGTCTT_L001_17592_1     1 1.000
#> lane1_3600STDY6183813_TGTACCTT_L001_17592_1     2 0.000
#> lane1_3600STDY6183814_TTCTGTGT_L001_17592_1     2 0.000
#> lane1_3600STDY6183815_TCTGCTGT_L001_17592_1     2 0.000
#> lane1_3600STDY6183816_TTGGAGGT_L001_17592_1     2 0.000
#> lane1_3600STDY6183817_TCGAGCGT_L001_17592_1     2 0.000
#> lane1_3600STDY6183818_TGATACGT_L001_17592_1     2 1.000
#> lane1_3600STDY6183819_TGCATAGT_L001_17592_1     1 1.000
#> lane1_3600STDY6183820_TTGACTCT_L001_17592_1     2 0.000
#> lane1_3600STDY6183821_TGCGATCT_L001_17592_1     1 0.249
#> lane1_3600STDY6183822_TTCCTGCT_L001_17592_1     2 0.498
#> lane1_3600STDY6183823_TAGTGACT_L001_17592_1     1 0.498
#> lane1_3600STDY6183824_TACAGGAT_L001_17592_1     1 1.000
#> lane1_3600STDY6183825_TCCTCAAT_L001_17592_1     1 1.000
#> lane1_3600STDY6183826_TGTGGTTG_L001_17592_1     1 0.747
#> lane1_3600STDY6183827_TAGTCTTG_L001_17592_1     1 1.000
#> lane1_3600STDY6183828_TTCCATTG_L001_17592_1     1 0.751
#> lane1_3600STDY6183829_TCGAAGTG_L001_17592_1     1 1.000
#> lane1_3600STDY6183830_TAACGCTG_L001_17592_1     1 0.000
#> lane1_3600STDY6183831_TTGGTATG_L001_17592_1     1 0.498
#> lane1_3600STDY6183832_TGAACTGG_L001_17592_1     1 0.000
#> lane1_3600STDY6183833_TACTTCGG_L001_17592_1     2 0.000
#> lane1_3600STDY6183834_TCTCACGG_L001_17592_1     1 1.000
#> lane1_3600STDY6183835_TCAGGAGG_L001_17592_1     1 0.751
#> lane1_3600STDY6183836_TAAGTTCG_L001_17592_1     1 1.000
#> lane1_3600STDY6183837_TCCAGTCG_L001_17592_1     2 0.000
#> lane1_3600STDY6183838_TGTATGCG_L001_17592_1     2 0.000
#> lane1_3600STDY6183839_TCATTGAG_L001_17592_1     2 0.751
#> lane1_3600STDY6183840_TGGCTCAG_L001_17592_1     2 0.000
#> lane1_3600STDY6183841_TATGCCAG_L001_17592_1     2 0.000
#> lane1_3600STDY6183842_TCAGATTC_L001_17592_1     2 0.000
#> lane1_3600STDY6183843_TACTAGTC_L001_17592_1     1 1.000
#> lane1_3600STDY6183844_TTCAGCTC_L001_17592_1     1 1.000
#> lane1_3600STDY6183845_TGTCTATC_L001_17592_1     1 0.249
#> lane1_3600STDY6183846_TATGTGGC_L001_17592_1     1 0.751
#> lane1_3600STDY6183847_TTACTCGC_L001_17592_1     2 0.249
#> lane1_3600STDY6183848_TCGTTAGC_L001_17592_1     1 0.498
#> lane1_3600STDY6183849_TACCGAGC_L001_17592_1     1 0.747
#> lane1_3600STDY6183850_TGTTCTCC_L001_17592_1     2 0.249
#> lane1_3600STDY6183851_TTCGCACC_L001_17592_1     1 0.747
#> lane1_3600STDY6183852_TTGCGTAC_L001_17592_1     1 1.000
#> lane1_3600STDY6183853_TCTACGAC_L001_17592_1     1 1.000
#> lane1_3600STDY6183854_TGACAGAC_L001_17592_1     1 1.000
#> lane1_3600STDY6183855_TAGAACAC_L001_17592_1     2 0.249
#> lane1_3600STDY6183856_TCATCCTA_L001_17592_1     1 1.000
#> lane1_3600STDY6183857_TGCTGATA_L001_17592_1     2 0.000
#> lane1_3600STDY6183858_TAGACGGA_L001_17592_1     2 0.000
#> lane1_3600STDY6183859_TGTGAAGA_L001_17592_1     2 0.000
#> lane1_3600STDY6183860_TCTCTTCA_L001_17592_1     2 0.000
#> lane1_3600STDY6183861_TTGTTCCA_L001_17592_1     2 0.000
#> lane1_3600STDY6183862_TGAAGCCA_L001_17592_1     2 0.000
#> lane1_3600STDY6183863_TACCACCA_L001_17592_1     2 0.000
#> lane1_3600STDY6183864_TGCGTGAA_L001_17592_1     2 0.000
#> lane1_3600STDY6183865_GGTGAGTT_L001_17592_1     2 1.000
#> lane1_3600STDY6183866_GATCTCTT_L001_17592_1     2 0.000
#> lane1_3600STDY6183867_GTGTCCTT_L001_17592_1     1 1.000
#> lane1_3600STDY6183868_GACGGATT_L001_17592_1     2 0.000
#> lane1_3600STDY6183869_GCAACATT_L001_17592_1     1 0.502
#> lane1_3600STDY6183870_GGTCGTGT_L001_17592_1     1 1.000
#> lane1_3600STDY6183871_GAATCTGT_L001_17592_1     2 0.000
#> lane1_3600STDY6183872_GTACATCT_L001_17592_1     2 0.000
#> lane1_3600STDY6183873_GAGGTGCT_L001_17592_1     1 1.000
#> lane1_3600STDY6183874_GCATGGCT_L001_17592_1     2 0.000
#> lane1_3600STDY6183875_GTTAGCCT_L001_17592_1     2 0.000
#> lane1_3600STDY6183876_GTCGCTAT_L001_17592_1     2 0.000
#> lane1_3600STDY6183877_GGAATGAT_L001_17592_1     1 1.000
#> lane1_3600STDY6183878_GAGCCAAT_L001_17592_1     1 1.000
#> lane1_3600STDY6183879_GCTCCTTG_L001_17592_1     2 0.000
#> lane1_3600STDY6183880_GTAAGGTG_L001_17592_1     2 0.000
#> lane1_3600STDY6183881_GAGGATGG_L001_17592_1     2 0.000
#> lane1_3600STDY6183882_GTTGTCGG_L001_17592_1     2 0.000
#> lane1_3600STDY6183883_GGATTAGG_L001_17592_1     2 0.000
#> lane1_3600STDY6183884_GATAGAGG_L001_17592_1     2 0.000
#> lane1_3600STDY6183885_GTGTGTCG_L001_17592_1     2 0.000
#> lane1_3600STDY6183886_GCAATCCG_L001_17592_1     2 0.000
#> lane1_3600STDY6183887_GACCTTAG_L001_17592_1     2 0.000
#> lane1_3600STDY6183888_GCCTGTTC_L001_17592_1     2 0.502
#> lane1_3600STDY6183889_GCACTGTC_L001_17592_1     2 0.000
#> lane1_3600STDY6183890_GCTAACTC_L001_17592_1     2 0.000
#> lane1_3600STDY6183891_GATTCATC_L001_17592_1     2 0.000
#> lane1_3600STDY6183892_GTCTTGGC_L001_17592_1     2 0.000
#> lane1_3600STDY6183893_GTAGAAGC_L001_17592_1     1 0.498
#> lane1_3600STDY6183894_GATGGTCC_L001_17592_1     1 1.000
#> lane1_3600STDY6183895_GTGCTACC_L001_17592_1     2 0.000
#> lane1_3600STDY6183896_GCGATTAC_L001_17592_1     2 0.000
#> lane1_3600STDY6183897_GGTTGGAC_L001_17592_1     2 0.000
#> lane1_3600STDY6183898_GGCACAAC_L001_17592_1     2 0.000
#> lane1_3600STDY6183899_GACACTTA_L001_17592_1     2 0.000
#> lane1_3600STDY6183900_GTGCAGTA_L001_17592_1     2 0.000
#> lane1_3600STDY6183901_GGAGTCTA_L001_17592_1     1 1.000
#> lane1_3600STDY6183902_GCTATGGA_L001_17592_1     1 1.000
#> lane1_3600STDY6183903_GAGTGCGA_L001_17592_1     2 0.000
#> lane1_3600STDY6183904_GTAACCGA_L001_17592_1     2 0.000
#> lane1_3600STDY6183905_GGCAAGCA_L001_17592_1     2 0.253
#> lane1_3600STDY6183906_GCCTTACA_L001_17592_1     2 0.000
#> lane1_3600STDY6183907_GAACGACA_L001_17592_1     2 0.000
#> lane1_3600STDY6183908_GCAGGTAA_L001_17592_1     2 0.502
#> lane1_3600STDY6183909_GCGTCGAA_L001_17592_1     2 0.000
#> lane1_3600STDY6183910_CGTTCGGT_L001_17592_1     2 0.253
#> lane1_3600STDY6183911_CACCAGGT_L001_17592_1     2 0.000
#> lane1_3600STDY6183912_CTGCGAGT_L001_17592_1     2 0.249
#> lane1_3600STDY6183913_CCGTATCT_L001_17592_1     2 0.253
#> lane1_3600STDY6183914_CGCTTCCT_L001_17592_1     2 0.000
#> lane1_3600STDY6183915_CAAGACCT_L001_17592_1     2 0.000
#> lane1_3600STDY6183916_CACACACT_L001_17592_1     2 0.000
#> lane1_3600STDY6183917_CCTAGTAT_L001_17592_1     1 0.751
#> lane1_3600STDY6183918_CCACCGAT_L001_17592_1     1 1.000
#> lane1_3600STDY6183919_CTTCACAT_L001_17592_1     2 0.249
#> lane1_3600STDY6183920_CTATCATG_L001_17592_1     1 1.000
#> lane1_3600STDY6183921_CATGAATG_L001_17592_1     1 1.000
#> lane1_3600STDY6183922_CCACTTGG_L001_17592_1     2 0.000
#> lane1_3600STDY6183923_CTGTACGG_L001_17592_1     1 1.000
#> lane1_3600STDY6183924_CTAGATAG_L001_17592_1     2 0.000
#> lane1_3600STDY6183925_CACTCGAG_L001_17592_1     2 0.000
#> lane1_3600STDY6183926_CCGACAAG_L001_17592_1     1 1.000
#> lane1_3600STDY6183927_CTTGCTTC_L001_17592_1     2 0.249
#> lane1_3600STDY6183928_CATAGGTC_L001_17592_1     2 0.000
#> lane1_3600STDY6183929_CACATTGC_L001_17592_1     2 0.000
#> lane1_3600STDY6183930_CGCTAAGC_L001_17592_1     2 0.000
#> lane1_3600STDY6183931_CAACCTCC_L001_17592_1     2 0.000
#> lane1_3600STDY6183932_CAGCTGAC_L001_17592_1     2 0.000
#> lane1_3600STDY6183933_CTCAAGAC_L001_17592_1     2 0.000
#> lane1_3600STDY6183934_CGTGTCAC_L001_17592_1     2 0.000
#> lane1_3600STDY6183935_CCATGCAC_L001_17592_1     2 1.000
#> lane1_3600STDY6183936_CGTTACTA_L001_17592_1     2 0.000
#> lane1_3600STDY6183937_CAAGTAGA_L001_17592_1     2 0.000
#> lane1_3600STDY6183938_CTCTCTCA_L001_17592_1     1 1.000
#> lane1_3600STDY6183939_CGACTGCA_L001_17592_1     2 0.000
#> lane1_3600STDY6183940_CCTGAGCA_L001_17592_1     1 1.000
#> lane1_3600STDY6183941_CAGGCTAA_L001_17592_1     1 1.000
#> lane1_3600STDY6183942_CGGAGGAA_L001_17592_1     2 0.000
#> lane1_3600STDY6183943_AGGAGATT_L001_17592_1     2 0.000
#> lane1_3600STDY6183944_AGGCAGCT_L001_17592_1     2 0.498
#> lane1_3600STDY6183945_ACGTTCAT_L001_17592_1     2 0.000
#> lane1_3600STDY6183946_AACGTGTG_L001_17592_1     1 0.751
#> lane1_3600STDY6183947_AGACCGTG_L001_17592_1     1 1.000
#> lane1_3600STDY6183948_ACCTCTGG_L001_17592_1     1 1.000
#> lane1_3600STDY6183949_ATCCTAGG_L001_17592_1     1 1.000
#> lane1_3600STDY6183950_ATCAACCG_L001_17592_1     1 1.000
#> lane1_3600STDY6183951_AGGTCACG_L001_17592_1     1 0.747
#> lane1_3600STDY6183952_ACTGTTAG_L001_17592_1     2 0.000
#> lane1_3600STDY6183953_AAGAGTAG_L001_17592_1     2 0.000
#> lane1_3600STDY6183954_ATTCGGAG_L001_17592_1     1 0.747
#> lane1_3600STDY6183955_ACGCAATC_L001_17592_1     2 0.000
#> lane1_3600STDY6183956_ACAAGTGC_L001_17592_1     2 0.000
#> lane1_3600STDY6183957_ATGGATCC_L001_17592_1     2 0.000
#> lane1_3600STDY6183958_AGAGGACC_L001_17592_1     2 0.000
#> lane1_3600STDY6183959_ATCTCCAC_L001_17592_1     2 0.000
#> lane1_3600STDY6183960_ATTGGCTA_L001_17592_1     2 0.000
#> lane1_3600STDY6183961_AATCCTGA_L001_17592_1     2 0.000
#> lane1_3600STDY6183962_AGGATTCA_L001_17592_1     2 0.000
#> lane1_3600STDY6183963_AACTGGCA_L001_17592_1     2 0.000
#> lane1_3600STDY6183964_ACAACGCA_L001_17592_1     2 0.000
#> lane1_3600STDY6183965_CGGAAACA_L001_17592_1     2 1.000
#> lane1_3600STDY6183966_AATGAATT_L001_17592_1     2 0.000
#> lane1_3600STDY6183967_TAGGACCC_L001_17592_1     2 0.000
#> lane1_3600STDY6183968_TCTCAGTG_L001_17592_1     2 0.000
#> lane1_3600STDY6183969_CATGGGAA_L001_17592_1     2 0.249
#> lane1_3600STDY6183970_CCTAAGAT_L001_17592_1     2 0.000
#> lane1_3600STDY6183971_CTCAGATA_L001_17592_1     2 0.000
#> lane1_3600STDY6183972_CCCATAGG_L001_17592_1     2 0.000
#> lane1_3600STDY6183973_GCTATGAC_L001_17592_1     2 0.000
#> lane1_3600STDY6183974_GCTGTGAA_L001_17592_1     1 1.000
#> lane1_3600STDY6183975_ACCTTCAA_L001_17592_1     2 0.000
#> lane1_3600STDY6183976_ACAAAGCC_L001_17592_1     2 1.000
#> lane1_3600STDY6183977_CAAAACCG_L001_17592_1     2 0.000
#> lane1_3600STDY6183978_GCTGGACA_L001_17592_1     2 0.000
#> lane1_3600STDY6183979_AAGTCGTA_L001_17592_1     2 0.000
#> lane1_3600STDY6183980_CATCCGTA_L001_17592_1     2 0.000
#> lane1_3600STDY6183981_TTGTGTCT_L001_17592_1     2 0.000
#> lane1_3600STDY6183982_TGCTCTAG_L001_17592_1     2 0.751
#> lane1_3600STDY6183983_ACCCAACA_L001_17592_1     2 0.000
#> lane1_3600STDY6183984_CGATCTGA_L001_17592_1     2 0.000
#> lane1_3600STDY6183985_GTTCCACG_L001_17592_1     2 0.000
#> lane1_3600STDY6183986_ACTCTTTC_L001_17592_1     2 0.000
#> lane1_3600STDY6183987_TATTGGAG_L001_17592_1     2 0.000
#> lane1_3600STDY6183988_TAAACATA_L001_17592_1     2 0.000
#> lane1_3600STDY6183989_GTAAGATA_L001_17592_1     2 0.000
#> lane1_3600STDY6183990_TACCGCAA_L001_17592_1     1 1.000
#> lane1_3600STDY6183991_TATCTCCT_L001_17592_1     2 0.000
#> lane1_3600STDY6183992_TGTCATCT_L001_17592_1     2 0.000
#> lane1_3600STDY6183993_ATAGCTCT_L001_17592_1     2 0.000
#> lane1_3600STDY6183994_AGTCCAAC_L001_17592_1     2 0.000
#> lane1_3600STDY6183995_TTTGGGCA_L001_17592_1     2 0.000
#> lane1_3600STDY6183996_TCTGACGC_L001_17592_1     2 0.000
#> lane1_3600STDY6183997_TGTCGACT_L001_17592_1     2 0.000
#> lane1_3600STDY6183998_GTCACGTA_L001_17592_1     2 0.000
#> lane1_3600STDY6183999_TTGAGCGA_L001_17592_1     2 0.000
#> lane1_3600STDY6184000_GAGACATA_L001_17592_1     1 1.000
#> lane1_3600STDY6184001_GTCAAGCT_L001_17592_1     2 0.000
#> lane1_3600STDY6184002_AGCAAGTT_L001_17592_1     1 0.498
#> lane1_3600STDY6184003_GACGCTCA_L001_17592_1     1 1.000
#> lane1_3600STDY6184004_ACGGCAGC_L001_17592_1     1 1.000
#> lane1_3600STDY6184005_AGAACTGA_L001_17592_1     1 1.000
#> lane1_3600STDY6184006_CGCCTTTG_L001_17592_1     2 0.000
#> lane1_3600STDY6184007_TAAGGTCA_L001_17592_1     2 0.000
#> lane1_3600STDY6184008_ACGTTGGC_L001_17592_1     2 0.000
#> lane1_3600STDY6184009_CCAGCTTA_L001_17592_1     2 0.000
#> lane1_3600STDY6184010_GAATCCTA_L001_17592_1     2 0.249
#> lane1_3600STDY6184011_ACTTCGTA_L001_17592_1     2 0.000
#> lane1_3600STDY6184012_TAGTCGGT_L001_17592_1     1 0.751
#> lane1_3600STDY6184013_CGCACGAG_L001_17592_1     2 0.000
#> lane1_3600STDY6184014_ACGTACTA_L001_17592_1     2 0.000
#> lane1_3600STDY6184015_AGCGCCAA_L001_17592_1     2 0.249
#> lane1_3600STDY6184016_GCCTGCCC_L001_17592_1     2 0.000
#> lane1_3600STDY6184017_AGGACGAT_L001_17592_1     2 0.000
#> lane1_3600STDY6184018_CTTGACCG_L001_17592_1     2 0.000
#> lane1_3600STDY6184019_AGGTCTAA_L001_17592_1     2 0.000
#> lane1_3600STDY6184020_CGAGATCC_L001_17592_1     2 0.000
#> lane1_3600STDY6184021_ATTAGCGG_L001_17592_1     1 1.000
#> lane1_3600STDY6184022_GCGCTGAT_L001_17592_1     2 0.000
#> lane1_3600STDY6184023_TGCTGAAC_L001_17592_1     2 0.000
#> lane1_3600STDY6184024_GAGGGCAG_L001_17592_1     1 1.000
#> lane1_3600STDY6184025_GTTTTCAC_L001_17592_1     1 0.498
#> lane1_3600STDY6184026_GAGATGCC_L001_17592_1     2 0.000
#> lane1_3600STDY6184027_TTGAGAAG_L001_17592_1     1 1.000
#> lane1_3600STDY6184028_GCATCCGG_L001_17592_1     1 1.000
#> lane1_3600STDY6184029_GTCACCAG_L001_17592_1     1 1.000
#> lane1_3600STDY6184030_GAGGTCGC_L001_17592_1     2 0.000
#> lane1_3600STDY6184031_AAGGGGTA_L001_17592_1     2 0.000
#> lane1_3600STDY6184032_TTTTACGT_L001_17592_1     2 0.000
#> lane1_3600STDY6184033_TTCCTACA_L001_17592_1     2 0.000
#> lane1_3600STDY6184034_AGTGTAGT_L001_17592_1     2 0.000
#> lane1_3600STDY6184035_GTGGCCAA_L001_17592_1     2 0.000
#> lane1_3600STDY6184036_AAATACTC_L001_17592_1     1 1.000
#> lane1_3600STDY6184037_CACCCGTC_L001_17592_1     2 0.253
#> lane1_3600STDY6184038_TCGTGGTT_L001_17592_1     2 0.000
#> lane1_3600STDY6184039_ACTTGGGG_L001_17592_1     2 0.000
#> lane1_3600STDY6184040_GGCTGCTT_L001_17592_1     2 0.000
#> lane1_3600STDY6184041_CAGGGTCG_L001_17592_1     2 0.000
#> lane1_3600STDY6184042_CTCGTCGA_L001_17592_1     2 0.253
#> lane1_3600STDY6184043_TCTACAGT_L001_17592_1     2 0.000
#> lane1_3600STDY6184044_CTTCTAGA_L001_17592_1     2 0.000
#> lane1_3600STDY6184045_AACGGCTT_L001_17592_1     2 0.000
#> lane1_3600STDY6184046_ATAAGACT_L001_17592_1     2 0.000
#> lane1_3600STDY6184047_GTTTTTCG_L001_17592_1     2 0.000
#> lane1_3600STDY6184048_ATTGGTAT_L001_17592_1     2 0.000
#> lane1_3600STDY6184049_CGCCAGTA_L001_17592_1     1 1.000
#> lane1_3600STDY6184050_AAGCCGAA_L001_17592_1     2 0.000
#> lane1_3600STDY6184051_TGACCCAC_L001_17592_1     2 0.000
#> lane1_3600STDY6184052_ATTGCACA_L001_17592_1     2 0.000
#> lane1_3600STDY6184053_CTTTTGAT_L001_17592_1     1 1.000
#> lane1_3600STDY6184054_TAGCGAGA_L001_17592_1     2 0.000
#> lane1_3600STDY6184055_TTCGCAGG_L001_17592_1     1 1.000
#> lane1_3600STDY6184056_TAGTTATT_L001_17592_1     2 0.000
#> lane1_3600STDY6184057_TCCTCCGA_L001_17592_1     1 1.000
#> lane1_3600STDY6184058_GCGGGTCT_L001_17592_1     2 0.000
#> lane1_3600STDY6184059_GATTCTAT_L001_17592_1     2 0.000
#> lane1_3600STDY6184060_ATGCAAAG_L001_17592_1     1 1.000
#> lane1_3600STDY6184061_GTCTGAGG_L001_17592_1     2 0.000
#> lane1_3600STDY6184062_TCTGGCGA_L001_17592_1     2 0.000
#> lane1_3600STDY6184063_AATTTGCG_L001_17592_1     2 0.000
#> lane1_3600STDY6184064_TGGGTTGG_L001_17592_1     2 0.000
#> lane1_3600STDY6184065_AGTTGAAA_L001_17592_1     2 0.000
#> lane1_3600STDY6184066_GACCGGAA_L001_17592_1     2 0.000
#> lane1_3600STDY6184067_GATCGAAC_L001_17592_1     2 0.000
#> lane1_3600STDY6184068_GTATAGGG_L001_17592_1     2 0.000
#> lane1_3600STDY6184069_GGTAAGAG_L001_17592_1     2 0.000
#> lane1_3600STDY6184070_AGTCCGAT_L001_17592_1     2 0.000
#> lane1_3600STDY6184071_ATACAGGC_L001_17592_1     2 0.000
#> lane1_3600STDY6184072_TGAGACTC_L001_17592_1     2 0.000
#> lane1_3600STDY6184073_ACTCAGGA_L001_17592_1     2 0.000
#> lane1_3600STDY6184074_GTGTCTGA_L001_17592_1     1 1.000
#> lane1_3600STDY6184075_CTTGAATC_L001_17592_1     2 0.249
#> lane1_3600STDY6184076_CCGCATGA_L001_17592_1     2 0.000
#> lane1_3600STDY6184077_AAGTAACA_L001_17592_1     2 0.000
#> lane1_3600STDY6184078_GTGGTACT_L001_17592_1     2 0.502
#> lane1_3600STDY6184079_AGCTGTGC_L001_17592_1     2 0.000
#> lane1_3600STDY6184080_TTACCTTC_L001_17592_1     2 0.000
#> lane1_3600STDY6184081_TCCGGGTA_L001_17592_1     2 0.000
#> lane1_3600STDY6184082_CTACGTAA_L001_17592_1     2 0.000
#> lane1_3600STDY6184083_TCGGACCG_L001_17592_1     2 0.000
#> lane1_3600STDY6184084_ATGCGTCG_L001_17592_1     1 1.000
#> lane1_3600STDY6184085_TTCTTAGC_L001_17592_1     2 0.000
#> lane1_3600STDY6184086_TGAGTAAG_L001_17592_1     2 0.249
#> lane1_3600STDY6184087_AAGTGATA_L001_17592_1     2 0.000
#> lane1_3600STDY6184088_TCGATGCG_L001_17592_1     2 0.000
#> lane1_3600STDY6184089_TATTCTGG_L001_17592_1     2 0.000
#> lane1_3600STDY6184090_AGCCGTGA_L001_17592_1     2 0.000
#> lane1_3600STDY6184091_AAGCCTTC_L001_17592_1     2 0.000
#> lane1_3600STDY6184092_AGGTATCC_L001_17592_1     2 0.000
#> lane1_3600STDY6184093_AGGATCTC_L001_17592_1     2 0.000
#> lane1_3600STDY6184094_CTGTTTGA_L001_17592_1     2 0.000
#> lane1_3600STDY6184095_GGAATTTC_L001_17592_1     2 0.000
#> lane1_3600STDY6184096_TTGGAGCA_L001_17592_1     1 1.000
#> lane1_3600STDY6184097_AAGGTCTG_L001_17592_1     1 1.000
#> lane1_3600STDY6184098_AATTAGGC_L001_17592_1     2 0.000
#> lane1_3600STDY6184099_AATCGGGT_L001_17592_1     2 0.000
#> lane1_3600STDY6184100_AGGTAGAC_L001_17592_1     2 0.498
#> lane1_3600STDY6184101_CTTATTCC_L001_17592_1     2 0.000
#> lane1_3600STDY6184102_CAGGCTCT_L001_17592_1     2 0.000
#> lane1_3600STDY6184103_AAAGCACG_L001_17592_1     2 0.000
#> lane1_3600STDY6184104_GTATACAC_L001_17592_1     2 0.000
#> lane1_3600STDY6184105_GGACATAT_L001_17592_1     2 0.000
#> lane1_3600STDY6184106_CGGTTGGG_L001_17592_1     2 0.000
#> lane1_3600STDY6184107_GTCCGTGA_L001_17592_1     2 0.000
#> lane1_3600STDY6184108_GCCGAACC_L001_17592_1     1 1.000
#> lane1_3600STDY6184109_ACTTTACT_L001_17592_1     2 0.000
#> lane1_3600STDY6184110_GGGTCCAT_L001_17592_1     2 0.000
#> lane1_3600STDY6184111_ATAACTAG_L001_17592_1     2 0.000
#> lane1_3600STDY6184112_AATAGAGA_L001_17592_1     2 0.000
#> lane1_3600STDY6184113_TCACCATT_L001_17592_1     2 0.000
#> lane1_3600STDY6184114_CGCCTGAT_L001_17592_1     2 0.000
#> lane1_3600STDY6184115_GCGTGAAC_L001_17592_1     2 0.000
#> lane1_3600STDY6184116_TAAGGGTG_L001_17592_1     2 0.253
#> lane1_3600STDY6184117_GGTGTCGA_L001_17592_1     2 0.000
#> lane1_3600STDY6184118_CCGTTAGG_L001_17592_1     2 0.000
#> lane1_3600STDY6184119_TGGCAAAA_L001_17592_1     2 0.000
#> lane1_3600STDY6184120_CCTACCCG_L001_17592_1     1 1.000
#> lane1_3600STDY6184121_AACAGCGC_L001_17592_1     1 1.000
#> lane1_3600STDY6184122_TATACATC_L001_17592_1     1 1.000
#> lane1_3600STDY6184123_AAGCGACT_L001_17592_1     2 0.000
#> lane1_3600STDY6184124_GAAGCGCA_L001_17592_1     2 0.000
#> lane1_3600STDY6184125_ACCTCTAC_L001_17592_1     2 0.000
#> lane1_3600STDY6184126_GATTGCGT_L001_17592_1     2 0.000
#> lane1_3600STDY6184127_GCTGGTTG_L001_17592_1     2 0.000
#> lane1_3600STDY6184128_ATCGTCCT_L001_17592_1     1 1.000
#> lane1_3600STDY6184129_GGACACGG_L001_17592_1     2 0.000
#> lane1_3600STDY6184130_CGCACCTA_L001_17592_1     2 0.000
#> lane1_3600STDY6184131_CTTCGGCT_L001_17592_1     1 1.000
#> lane1_3600STDY6184132_CGAATCGA_L001_17592_1     2 0.502
#> lane1_3600STDY6184133_TAACAACT_L001_17592_1     2 0.502
#> lane1_3600STDY6184134_AGCTCTTT_L001_17592_1     2 0.000
#> lane1_3600STDY6184135_TAATCCCT_L001_17592_1     2 0.000
#> lane1_3600STDY6184136_AGGACACT_L001_17592_1     2 0.000
#> lane1_3600STDY6184137_TTACACTA_L001_17592_1     2 0.000
#> lane1_3600STDY6184138_AAACATCA_L001_17592_1     2 0.000
#> lane1_3600STDY6184139_CCATAGCT_L001_17592_1     2 0.000
#> lane1_3600STDY6184140_GTTATGGC_L001_17592_1     2 0.000
#> lane1_3600STDY6184141_ATCCCCTA_L001_17592_1     2 0.000
#> lane1_3600STDY6184142_CATACTAC_L001_17592_1     2 0.000
#> lane1_3600STDY6184143_CAATTGTT_L001_17592_1     2 0.000
#> lane1_3600STDY6184144_AAACCCGT_L001_17592_1     2 0.000
#> lane1_3600STDY6184145_CAGATTTC_L001_17592_1     1 1.000
#> lane1_3600STDY6184146_GCGTAGGT_L001_17592_1     2 0.000
#> lane1_3600STDY6184147_GGCATTCG_L001_17592_1     2 0.000
#> lane1_3600STDY6184148_TGGGGCTT_L001_17592_1     2 0.000
#> lane1_3600STDY6184149_CTGACTAC_L001_17592_1     2 0.000
#> lane1_3600STDY6184150_AACTTTTA_L001_17592_1     2 0.000
#> lane1_3600STDY6184151_AGGGATTC_L001_17592_1     2 0.000
#> lane1_3600STDY6184152_CCGAGTAG_L001_17592_1     2 0.000
#> lane1_3600STDY6184153_GGGGACTA_L001_17592_1     2 0.000
#> lane1_3600STDY6184154_GGAGTTGA_L001_17592_1     2 0.000
#> lane1_3600STDY6184155_AGCTCATC_L001_17592_1     2 0.000
#> lane1_3600STDY6184156_TAATCAAC_L001_17592_1     2 0.000
#> lane1_3600STDY6184157_ACTGGTCG_L001_17592_1     1 1.000
#> lane1_3600STDY6184158_GACGATTG_L001_17592_1     2 0.000
#> lane1_3600STDY6184159_AGCGATGA_L001_17592_1     2 0.000
#> lane1_3600STDY6184160_GAAGAGAT_L001_17592_1     2 0.000
#> lane1_3600STDY6184161_CGTATGCA_L001_17592_1     2 0.000
#> lane1_3600STDY6184162_CACGTGCG_L001_17592_1     2 0.000
#> lane1_3600STDY6184163_GCTTAAAC_L001_17592_1     2 0.000
#> lane1_3600STDY6184164_GTTCCGCA_L001_17592_1     2 0.000
#> lane1_3600STDY6184165_GTATCGTC_L001_17592_1     2 0.000
#> lane1_3600STDY6184166_GTCCTCAC_L001_17592_1     2 0.000
#> lane1_3600STDY6184167_GTACGGAC_L001_17592_1     2 0.000
#> lane1_3600STDY6184168_CATTTTGC_L001_17592_1     2 0.000
#> lane1_3600STDY6184169_TCCTCTCT_L001_17592_1     2 1.000
#> lane1_3600STDY6184170_AGCAACGA_L001_17592_1     2 0.000
#> lane1_3600STDY6184171_ACAGAAGA_L001_17592_1     2 0.000
#> lane1_3600STDY6184172_CGACCCTT_L001_17592_1     2 0.000
#> lane1_3600STDY6184173_CTGCCTAG_L001_17592_1     2 0.000
#> lane1_3600STDY6184174_GAGCGCAT_L001_17592_1     2 0.000
#> lane1_3600STDY6184175_AACTTATC_L001_17592_1     2 0.000
#> lane1_3600STDY6184176_CCGATGTA_L001_17592_1     2 0.000
#> lane1_3600STDY6184177_TTACTACC_L001_17592_1     1 1.000
#> lane1_3600STDY6184178_CAAGGAGC_L001_17592_1     2 0.000
#> lane1_3600STDY6184179_TGGTTGAC_L001_17592_1     1 1.000
#> lane1_3600STDY6184180_ACCTGCTG_L001_17592_1     2 0.000

show/hide code output

get_classes(res, k = 3)
#>                                             class     p
#> lane1_3600STDY6077864_ATCACGTT_L001_15986_1     2 0.000
#> lane1_3600STDY6077865_CGATGTTT_L001_15986_1     2 0.000
#> lane1_3600STDY6077866_TTAGGCAT_L001_15986_1     1 0.000
#> lane1_3600STDY6077867_TGACCACT_L001_15986_1     1 0.000
#> lane1_3600STDY6077868_ACAGTGGT_L001_15986_1     1 0.000
#> lane1_3600STDY6077869_GCCAATGT_L001_15986_1     1 0.000
#> lane1_3600STDY6077870_CAGATCTG_L001_15986_1     1 0.000
#> lane1_3600STDY6077871_ACTTGATG_L001_15986_1     1 0.000
#> lane1_3600STDY6077872_GATCAGCG_L001_15986_1     1 0.000
#> lane1_3600STDY6077873_TAGCTTGT_L001_15986_1     1 0.000
#> lane1_3600STDY6077874_GGCTACAG_L001_15986_1     1 0.000
#> lane1_3600STDY6077875_CTTGTACT_L001_15986_1     1 0.000
#> lane1_3600STDY6077876_TGGTTGTT_L001_15986_1     1 0.000
#> lane1_3600STDY6077877_TCTCGGTT_L001_15986_1     1 1.000
#> lane1_3600STDY6077878_TAAGCGTT_L001_15986_1     1 0.000
#> lane1_3600STDY6077879_TCCGTCTT_L001_15986_1     1 0.000
#> lane1_3600STDY6077880_TGTACCTT_L001_15986_1     1 0.000
#> lane1_3600STDY6077881_TTCTGTGT_L001_15986_1     1 0.000
#> lane1_3600STDY6077882_TCTGCTGT_L001_15986_1     1 0.000
#> lane1_3600STDY6077883_TTGGAGGT_L001_15986_1     2 0.000
#> lane1_3600STDY6077884_TCGAGCGT_L001_15986_1     1 0.000
#> lane1_3600STDY6077885_TGATACGT_L001_15986_1     1 0.000
#> lane1_3600STDY6077886_TGCATAGT_L001_15986_1     1 0.000
#> lane1_3600STDY6077887_TTGACTCT_L001_15986_1     1 0.000
#> lane1_3600STDY6077888_TGCGATCT_L001_15986_1     1 0.000
#> lane1_3600STDY6077889_TTCCTGCT_L001_15986_1     1 0.000
#> lane1_3600STDY6077890_TAGTGACT_L001_15986_1     1 0.000
#> lane1_3600STDY6077891_TACAGGAT_L001_15986_1     1 0.000
#> lane1_3600STDY6077892_TCCTCAAT_L001_15986_1     1 0.000
#> lane1_3600STDY6077893_TGTGGTTG_L001_15986_1     1 0.000
#> lane1_3600STDY6077894_TAGTCTTG_L001_15986_1     1 0.000
#> lane1_3600STDY6077895_TTCCATTG_L001_15986_1     1 0.000
#> lane1_3600STDY6077896_TCGAAGTG_L001_15986_1     1 1.000
#> lane1_3600STDY6077897_TAACGCTG_L001_15986_1     1 0.000
#> lane1_3600STDY6077898_TTGGTATG_L001_15986_1     1 0.000
#> lane1_3600STDY6077899_TGAACTGG_L001_15986_1     2 0.000
#> lane1_3600STDY6077900_TACTTCGG_L001_15986_1     1 0.000
#> lane1_3600STDY6077901_TCTCACGG_L001_15986_1     1 0.000
#> lane1_3600STDY6077902_TCAGGAGG_L001_15986_1     1 0.000
#> lane1_3600STDY6077903_TAAGTTCG_L001_15986_1     1 0.000
#> lane1_3600STDY6077904_TCCAGTCG_L001_15986_1     2 0.000
#> lane1_3600STDY6077905_TGTATGCG_L001_15986_1     1 0.000
#> lane1_3600STDY6077906_TCATTGAG_L001_15986_1     1 0.000
#> lane1_3600STDY6077907_TGGCTCAG_L001_15986_1     1 0.000
#> lane1_3600STDY6077908_TATGCCAG_L001_15986_1     1 0.000
#> lane1_3600STDY6077909_TCAGATTC_L001_15986_1     1 0.000
#> lane1_3600STDY6077910_TACTAGTC_L001_15986_1     1 0.000
#> lane1_3600STDY6077911_TTCAGCTC_L001_15986_1     2 0.000
#> lane1_3600STDY6077912_TGTCTATC_L001_15986_1     1 0.000
#> lane1_3600STDY6077913_TATGTGGC_L001_15986_1     1 0.000
#> lane1_3600STDY6077914_TTACTCGC_L001_15986_1     2 0.000
#> lane1_3600STDY6077915_TCGTTAGC_L001_15986_1     1 0.000
#> lane1_3600STDY6077916_TACCGAGC_L001_15986_1     1 0.000
#> lane1_3600STDY6077917_TGTTCTCC_L001_15986_1     1 0.000
#> lane1_3600STDY6077918_TTCGCACC_L001_15986_1     1 0.000
#> lane1_3600STDY6077919_TTGCGTAC_L001_15986_1     1 0.000
#> lane1_3600STDY6077920_TCTACGAC_L001_15986_1     1 0.000
#> lane1_3600STDY6077921_TGACAGAC_L001_15986_1     1 0.000
#> lane1_3600STDY6077922_TAGAACAC_L001_15986_1     1 0.000
#> lane1_3600STDY6077923_TCATCCTA_L001_15986_1     1 0.000
#> lane1_3600STDY6077924_TGCTGATA_L001_15986_1     1 0.000
#> lane1_3600STDY6077925_TAGACGGA_L001_15986_1     1 0.000
#> lane1_3600STDY6077926_TGTGAAGA_L001_15986_1     1 0.000
#> lane1_3600STDY6077927_TCTCTTCA_L001_15986_1     1 0.000
#> lane1_3600STDY6077928_TTGTTCCA_L001_15986_1     1 0.000
#> lane1_3600STDY6077929_TGAAGCCA_L001_15986_1     1 0.000
#> lane1_3600STDY6077930_TACCACCA_L001_15986_1     1 0.000
#> lane1_3600STDY6077931_TGCGTGAA_L001_15986_1     1 0.000
#> lane1_3600STDY6077932_GGTGAGTT_L001_15986_1     1 0.000
#> lane1_3600STDY6077933_GATCTCTT_L001_15986_1     2 0.000
#> lane1_3600STDY6077934_GTGTCCTT_L001_15986_1     2 0.000
#> lane1_3600STDY6077935_GACGGATT_L001_15986_1     1 0.000
#> lane1_3600STDY6077936_GCAACATT_L001_15986_1     1 1.000
#> lane1_3600STDY6077937_GGTCGTGT_L001_15986_1     1 0.000
#> lane1_3600STDY6077938_GAATCTGT_L001_15986_1     1 0.000
#> lane1_3600STDY6077939_GTACATCT_L001_15986_1     1 0.000
#> lane1_3600STDY6077940_GAGGTGCT_L001_15986_1     1 0.000
#> lane1_3600STDY6077941_GCATGGCT_L001_15986_1     1 0.000
#> lane1_3600STDY6077942_GTTAGCCT_L001_15986_1     1 0.000
#> lane1_3600STDY6077943_GTCGCTAT_L001_15986_1     1 0.000
#> lane1_3600STDY6077944_GGAATGAT_L001_15986_1     1 0.000
#> lane1_3600STDY6077945_GAGCCAAT_L001_15986_1     1 0.000
#> lane1_3600STDY6077946_GCTCCTTG_L001_15986_1     1 0.000
#> lane1_3600STDY6077947_GTAAGGTG_L001_15986_1     1 0.000
#> lane1_3600STDY6077948_GAGGATGG_L001_15986_1     1 0.000
#> lane1_3600STDY6077949_GTTGTCGG_L001_15986_1     1 0.000
#> lane1_3600STDY6077950_GGATTAGG_L001_15986_1     1 0.000
#> lane1_3600STDY6077951_GATAGAGG_L001_15986_1     1 0.000
#> lane1_3600STDY6077952_GTGTGTCG_L001_15986_1     1 0.000
#> lane1_3600STDY6077953_GCAATCCG_L001_15986_1     1 0.000
#> lane1_3600STDY6077954_GACCTTAG_L001_15986_1     1 0.000
#> lane1_3600STDY6077955_GCCTGTTC_L001_15986_1     1 0.000
#> lane1_3600STDY6077956_GCACTGTC_L001_15986_1     1 0.000
#> lane1_3600STDY6077957_GCTAACTC_L001_15986_1     1 0.000
#> lane1_3600STDY6077958_GATTCATC_L001_15986_1     1 0.000
#> lane1_3600STDY6077959_GTCTTGGC_L001_15986_1     1 0.000
#> lane3_3600STDY6077960_ATCACGTT_L003_15987_1     2 0.000
#> lane3_3600STDY6077961_CGATGTTT_L003_15987_1     2 0.000
#> lane3_3600STDY6077962_TTAGGCAT_L003_15987_1     1 1.000
#> lane3_3600STDY6077963_TGACCACT_L003_15987_1     1 1.000
#> lane3_3600STDY6077964_ACAGTGGT_L003_15987_1     1 1.000
#> lane3_3600STDY6077965_GCCAATGT_L003_15987_1     1 1.000
#> lane3_3600STDY6077966_CAGATCTG_L003_15987_1     1 1.000
#> lane3_3600STDY6077967_ACTTGATG_L003_15987_1     1 1.000
#> lane3_3600STDY6077968_GATCAGCG_L003_15987_1     1 1.000
#> lane3_3600STDY6077969_TAGCTTGT_L003_15987_1     1 1.000
#> lane3_3600STDY6077970_GGCTACAG_L003_15987_1     1 1.000
#> lane3_3600STDY6077971_CTTGTACT_L003_15987_1     1 1.000
#> lane3_3600STDY6077972_TGGTTGTT_L003_15987_1     1 1.000
#> lane3_3600STDY6077973_TCTCGGTT_L003_15987_1     1 1.000
#> lane3_3600STDY6077974_TAAGCGTT_L003_15987_1     1 1.000
#> lane3_3600STDY6077975_TCCGTCTT_L003_15987_1     1 1.000
#> lane3_3600STDY6077976_TGTACCTT_L003_15987_1     1 1.000
#> lane3_3600STDY6077977_TTCTGTGT_L003_15987_1     1 1.000
#> lane3_3600STDY6077978_TCTGCTGT_L003_15987_1     2 0.000
#> lane3_3600STDY6077979_TTGGAGGT_L003_15987_1     1 1.000
#> lane3_3600STDY6077980_TCGAGCGT_L003_15987_1     1 1.000
#> lane3_3600STDY6077981_TGATACGT_L003_15987_1     1 1.000
#> lane3_3600STDY6077982_TGCATAGT_L003_15987_1     1 1.000
#> lane3_3600STDY6077983_TTGACTCT_L003_15987_1     1 1.000
#> lane3_3600STDY6077984_TGCGATCT_L003_15987_1     1 1.000
#> lane3_3600STDY6077985_TTCCTGCT_L003_15987_1     1 1.000
#> lane3_3600STDY6077986_TAGTGACT_L003_15987_1     1 1.000
#> lane3_3600STDY6077987_TACAGGAT_L003_15987_1     1 1.000
#> lane3_3600STDY6077988_TCCTCAAT_L003_15987_1     1 1.000
#> lane3_3600STDY6077989_TGTGGTTG_L003_15987_1     1 1.000
#> lane3_3600STDY6077990_TAGTCTTG_L003_15987_1     1 1.000
#> lane3_3600STDY6077991_TTCCATTG_L003_15987_1     1 1.000
#> lane3_3600STDY6077992_TCGAAGTG_L003_15987_1     1 1.000
#> lane3_3600STDY6077993_TAACGCTG_L003_15987_1     1 1.000
#> lane3_3600STDY6077994_TTGGTATG_L003_15987_1     1 1.000
#> lane3_3600STDY6077995_TGAACTGG_L003_15987_1     1 1.000
#> lane3_3600STDY6077996_TACTTCGG_L003_15987_1     1 1.000
#> lane3_3600STDY6077997_TCTCACGG_L003_15987_1     2 0.000
#> lane3_3600STDY6077998_TCAGGAGG_L003_15987_1     1 1.000
#> lane3_3600STDY6077999_TAAGTTCG_L003_15987_1     1 1.000
#> lane3_3600STDY6078000_TCCAGTCG_L003_15987_1     1 1.000
#> lane3_3600STDY6078001_TGTATGCG_L003_15987_1     2 0.000
#> lane3_3600STDY6078002_TCATTGAG_L003_15987_1     3 0.000
#> lane3_3600STDY6078003_TGGCTCAG_L003_15987_1     1 1.000
#> lane3_3600STDY6078004_TATGCCAG_L003_15987_1     1 1.000
#> lane3_3600STDY6078005_TCAGATTC_L003_15987_1     1 1.000
#> lane3_3600STDY6078006_TACTAGTC_L003_15987_1     1 1.000
#> lane3_3600STDY6078007_TTCAGCTC_L003_15987_1     1 1.000
#> lane3_3600STDY6078008_TGTCTATC_L003_15987_1     1 1.000
#> lane3_3600STDY6078009_TATGTGGC_L003_15987_1     1 1.000
#> lane3_3600STDY6078010_TTACTCGC_L003_15987_1     1 1.000
#> lane3_3600STDY6078011_TCGTTAGC_L003_15987_1     1 1.000
#> lane3_3600STDY6078012_TACCGAGC_L003_15987_1     1 1.000
#> lane3_3600STDY6078013_TGTTCTCC_L003_15987_1     1 1.000
#> lane3_3600STDY6078014_TTCGCACC_L003_15987_1     1 1.000
#> lane3_3600STDY6078015_TTGCGTAC_L003_15987_1     1 1.000
#> lane3_3600STDY6078016_TCTACGAC_L003_15987_1     1 1.000
#> lane3_3600STDY6078017_TGACAGAC_L003_15987_1     1 1.000
#> lane3_3600STDY6078018_TAGAACAC_L003_15987_1     1 1.000
#> lane3_3600STDY6078019_TCATCCTA_L003_15987_1     1 1.000
#> lane3_3600STDY6078020_TGCTGATA_L003_15987_1     1 1.000
#> lane3_3600STDY6078021_TAGACGGA_L003_15987_1     1 1.000
#> lane3_3600STDY6078022_TGTGAAGA_L003_15987_1     1 1.000
#> lane3_3600STDY6078023_TCTCTTCA_L003_15987_1     1 1.000
#> lane3_3600STDY6078024_TTGTTCCA_L003_15987_1     1 1.000
#> lane3_3600STDY6078025_TGAAGCCA_L003_15987_1     1 1.000
#> lane3_3600STDY6078026_TACCACCA_L003_15987_1     1 1.000
#> lane3_3600STDY6078027_TGCGTGAA_L003_15987_1     2 0.000
#> lane3_3600STDY6078028_GGTGAGTT_L003_15987_1     1 1.000
#> lane3_3600STDY6078029_GATCTCTT_L003_15987_1     1 1.000
#> lane3_3600STDY6078030_GTGTCCTT_L003_15987_1     1 1.000
#> lane3_3600STDY6078031_GACGGATT_L003_15987_1     1 1.000
#> lane3_3600STDY6078032_GCAACATT_L003_15987_1     1 1.000
#> lane3_3600STDY6078033_GGTCGTGT_L003_15987_1     1 1.000
#> lane3_3600STDY6078034_GAATCTGT_L003_15987_1     1 1.000
#> lane3_3600STDY6078035_GTACATCT_L003_15987_1     1 1.000
#> lane3_3600STDY6078036_GAGGTGCT_L003_15987_1     1 1.000
#> lane3_3600STDY6078037_GCATGGCT_L003_15987_1     1 1.000
#> lane3_3600STDY6078038_GTTAGCCT_L003_15987_1     1 1.000
#> lane3_3600STDY6078039_GTCGCTAT_L003_15987_1     1 1.000
#> lane3_3600STDY6078040_GGAATGAT_L003_15987_1     1 1.000
#> lane3_3600STDY6078041_GAGCCAAT_L003_15987_1     1 1.000
#> lane3_3600STDY6078042_GCTCCTTG_L003_15987_1     1 1.000
#> lane3_3600STDY6078043_GTAAGGTG_L003_15987_1     1 1.000
#> lane3_3600STDY6078044_GAGGATGG_L003_15987_1     1 1.000
#> lane3_3600STDY6078045_GTTGTCGG_L003_15987_1     1 1.000
#> lane3_3600STDY6078046_GGATTAGG_L003_15987_1     1 1.000
#> lane3_3600STDY6078047_GATAGAGG_L003_15987_1     1 1.000
#> lane3_3600STDY6078048_GTGTGTCG_L003_15987_1     1 1.000
#> lane3_3600STDY6078049_GCAATCCG_L003_15987_1     1 1.000
#> lane3_3600STDY6078050_GACCTTAG_L003_15987_1     1 1.000
#> lane3_3600STDY6078051_GCCTGTTC_L003_15987_1     1 1.000
#> lane3_3600STDY6078052_GCACTGTC_L003_15987_1     1 1.000
#> lane3_3600STDY6078053_GCTAACTC_L003_15987_1     1 1.000
#> lane3_3600STDY6078054_GATTCATC_L003_15987_1     1 1.000
#> lane3_3600STDY6078055_GTCTTGGC_L003_15987_1     1 1.000
#> lane1_3600STDY6167693_ATCACGTT_L001_17236_1     1 0.000
#> lane1_3600STDY6167694_CGATGTTT_L001_17236_1     1 0.000
#> lane1_3600STDY6167695_TTAGGCAT_L001_17236_1     3 1.000
#> lane1_3600STDY6167696_TGACCACT_L001_17236_1     1 0.000
#> lane1_3600STDY6167697_ACAGTGGT_L001_17236_1     2 0.000
#> lane1_3600STDY6167698_GCCAATGT_L001_17236_1     1 0.000
#> lane1_3600STDY6167699_CAGATCTG_L001_17236_1     1 0.000
#> lane1_3600STDY6167700_ACTTGATG_L001_17236_1     2 0.000
#> lane1_3600STDY6167701_GATCAGCG_L001_17236_1     1 0.000
#> lane1_3600STDY6167702_TAGCTTGT_L001_17236_1     1 0.000
#> lane1_3600STDY6167703_GGCTACAG_L001_17236_1     1 0.000
#> lane1_3600STDY6167704_CTTGTACT_L001_17236_1     3 1.000
#> lane1_3600STDY6167705_TGGTTGTT_L001_17236_1     1 0.000
#> lane1_3600STDY6167706_TCTCGGTT_L001_17236_1     2 0.000
#> lane1_3600STDY6167707_TAAGCGTT_L001_17236_1     2 0.000
#> lane1_3600STDY6167708_TCCGTCTT_L001_17236_1     1 0.000
#> lane1_3600STDY6167709_TGTACCTT_L001_17236_1     1 0.000
#> lane1_3600STDY6167710_TTCTGTGT_L001_17236_1     2 0.000
#> lane1_3600STDY6167711_TCTGCTGT_L001_17236_1     1 0.000
#> lane1_3600STDY6167712_TTGGAGGT_L001_17236_1     1 0.000
#> lane1_3600STDY6167713_TCGAGCGT_L001_17236_1     1 0.000
#> lane1_3600STDY6167714_TGATACGT_L001_17236_1     1 0.000
#> lane1_3600STDY6167715_TGCATAGT_L001_17236_1     1 0.000
#> lane1_3600STDY6167716_TTGACTCT_L001_17236_1     1 0.000
#> lane1_3600STDY6167717_TGCGATCT_L001_17236_1     1 0.000
#> lane1_3600STDY6167718_TTCCTGCT_L001_17236_1     2 0.000
#> lane1_3600STDY6167719_TAGTGACT_L001_17236_1     3 1.000
#> lane1_3600STDY6167720_TACAGGAT_L001_17236_1     3 1.000
#> lane1_3600STDY6167721_TCCTCAAT_L001_17236_1     3 1.000
#> lane1_3600STDY6167722_TGTGGTTG_L001_17236_1     1 0.000
#> lane1_3600STDY6167723_TAGTCTTG_L001_17236_1     1 0.000
#> lane1_3600STDY6167724_TTCCATTG_L001_17236_1     2 0.000
#> lane1_3600STDY6167725_TCGAAGTG_L001_17236_1     1 0.000
#> lane1_3600STDY6167726_TAACGCTG_L001_17236_1     1 0.000
#> lane1_3600STDY6167727_TTGGTATG_L001_17236_1     1 0.000
#> lane1_3600STDY6167728_TGAACTGG_L001_17236_1     1 0.000
#> lane1_3600STDY6167729_TACTTCGG_L001_17236_1     1 0.000
#> lane1_3600STDY6167730_TCTCACGG_L001_17236_1     1 0.000
#> lane1_3600STDY6167731_TCAGGAGG_L001_17236_1     1 0.000
#> lane1_3600STDY6167732_TAAGTTCG_L001_17236_1     1 0.000
#> lane1_3600STDY6167733_TCCAGTCG_L001_17236_1     1 0.000
#> lane1_3600STDY6167734_TGTATGCG_L001_17236_1     2 0.000
#> lane1_3600STDY6167735_TCATTGAG_L001_17236_1     1 0.000
#> lane1_3600STDY6167736_TGGCTCAG_L001_17236_1     1 0.000
#> lane1_3600STDY6167737_TATGCCAG_L001_17236_1     1 0.000
#> lane1_3600STDY6167738_TCAGATTC_L001_17236_1     1 0.000
#> lane1_3600STDY6167739_TACTAGTC_L001_17236_1     1 0.000
#> lane1_3600STDY6167740_TTCAGCTC_L001_17236_1     1 0.000
#> lane1_3600STDY6167741_TGTCTATC_L001_17236_1     1 0.000
#> lane1_3600STDY6167742_TATGTGGC_L001_17236_1     1 0.000
#> lane1_3600STDY6167743_TTACTCGC_L001_17236_1     1 0.253
#> lane1_3600STDY6167744_TCGTTAGC_L001_17236_1     1 0.000
#> lane1_3600STDY6167745_TACCGAGC_L001_17236_1     3 1.000
#> lane1_3600STDY6167746_TGTTCTCC_L001_17236_1     1 0.000
#> lane1_3600STDY6167747_TTCGCACC_L001_17236_1     3 1.000
#> lane1_3600STDY6167748_TTGCGTAC_L001_17236_1     1 0.000
#> lane1_3600STDY6167749_TCTACGAC_L001_17236_1     1 0.000
#> lane1_3600STDY6167750_TGACAGAC_L001_17236_1     1 0.000
#> lane1_3600STDY6167751_TAGAACAC_L001_17236_1     1 0.000
#> lane1_3600STDY6167752_TCATCCTA_L001_17236_1     1 0.000
#> lane1_3600STDY6167753_TGCTGATA_L001_17236_1     1 0.000
#> lane1_3600STDY6167754_TAGACGGA_L001_17236_1     1 0.000
#> lane1_3600STDY6167755_TGTGAAGA_L001_17236_1     1 0.000
#> lane1_3600STDY6167756_TCTCTTCA_L001_17236_1     1 0.000
#> lane1_3600STDY6167757_TTGTTCCA_L001_17236_1     1 0.000
#> lane1_3600STDY6167758_TGAAGCCA_L001_17236_1     2 0.000
#> lane1_3600STDY6167759_TACCACCA_L001_17236_1     1 0.000
#> lane1_3600STDY6167760_TGCGTGAA_L001_17236_1     1 0.000
#> lane1_3600STDY6167761_GGTGAGTT_L001_17236_1     1 0.000
#> lane1_3600STDY6167762_GATCTCTT_L001_17236_1     1 0.000
#> lane1_3600STDY6167763_GTGTCCTT_L001_17236_1     1 0.000
#> lane1_3600STDY6167764_GACGGATT_L001_17236_1     1 0.000
#> lane1_3600STDY6167765_GCAACATT_L001_17236_1     1 0.000
#> lane1_3600STDY6167766_GGTCGTGT_L001_17236_1     1 0.000
#> lane1_3600STDY6167767_GAATCTGT_L001_17236_1     1 0.000
#> lane1_3600STDY6167768_GTACATCT_L001_17236_1     1 0.000
#> lane1_3600STDY6167769_GAGGTGCT_L001_17236_1     1 0.000
#> lane1_3600STDY6167770_GCATGGCT_L001_17236_1     1 0.000
#> lane1_3600STDY6167771_GTTAGCCT_L001_17236_1     1 0.000
#> lane1_3600STDY6167772_GTCGCTAT_L001_17236_1     1 0.000
#> lane1_3600STDY6167773_GGAATGAT_L001_17236_1     1 0.000
#> lane1_3600STDY6167774_GAGCCAAT_L001_17236_1     1 0.000
#> lane1_3600STDY6167775_GCTCCTTG_L001_17236_1     1 0.000
#> lane1_3600STDY6167776_GTAAGGTG_L001_17236_1     2 0.000
#> lane1_3600STDY6167777_GAGGATGG_L001_17236_1     1 0.000
#> lane1_3600STDY6167778_GTTGTCGG_L001_17236_1     2 0.000
#> lane1_3600STDY6167779_GGATTAGG_L001_17236_1     1 0.000
#> lane1_3600STDY6167780_GATAGAGG_L001_17236_1     1 0.000
#> lane1_3600STDY6167781_GTGTGTCG_L001_17236_1     1 0.000
#> lane1_3600STDY6167782_GCAATCCG_L001_17236_1     1 0.000
#> lane1_3600STDY6167783_GACCTTAG_L001_17236_1     1 0.000
#> lane1_3600STDY6167784_GCCTGTTC_L001_17236_1     1 0.000
#> lane1_3600STDY6167785_GCACTGTC_L001_17236_1     1 0.000
#> lane1_3600STDY6167786_GCTAACTC_L001_17236_1     1 0.000
#> lane1_3600STDY6167787_GATTCATC_L001_17236_1     1 1.000
#> lane1_3600STDY6167788_GTCTTGGC_L001_17236_1     2 0.000
#> lane1_3600STDY6167789_GTAGAAGC_L001_17236_1     1 0.000
#> lane1_3600STDY6167790_GATGGTCC_L001_17236_1     1 0.000
#> lane1_3600STDY6167791_GTGCTACC_L001_17236_1     1 0.249
#> lane1_3600STDY6167792_GCGATTAC_L001_17236_1     1 0.000
#> lane1_3600STDY6167793_GGTTGGAC_L001_17236_1     1 0.000
#> lane1_3600STDY6167794_GGCACAAC_L001_17236_1     1 0.000
#> lane1_3600STDY6167795_GACACTTA_L001_17236_1     1 0.000
#> lane1_3600STDY6167796_GTGCAGTA_L001_17236_1     1 0.000
#> lane1_3600STDY6167797_GGAGTCTA_L001_17236_1     1 0.000
#> lane1_3600STDY6167798_GCTATGGA_L001_17236_1     1 0.000
#> lane1_3600STDY6167799_GAGTGCGA_L001_17236_1     3 0.249
#> lane1_3600STDY6167800_GTAACCGA_L001_17236_1     1 0.000
#> lane1_3600STDY6167801_GGCAAGCA_L001_17236_1     1 0.000
#> lane1_3600STDY6167802_GCCTTACA_L001_17236_1     1 0.000
#> lane1_3600STDY6167803_GAACGACA_L001_17236_1     1 0.000
#> lane1_3600STDY6167804_GCAGGTAA_L001_17236_1     1 0.000
#> lane1_3600STDY6167805_GCGTCGAA_L001_17236_1     1 0.000
#> lane1_3600STDY6167806_CGTTCGGT_L001_17236_1     1 0.000
#> lane1_3600STDY6167807_CACCAGGT_L001_17236_1     1 0.000
#> lane1_3600STDY6167808_CTGCGAGT_L001_17236_1     1 0.000
#> lane1_3600STDY6167809_CCGTATCT_L001_17236_1     1 0.000
#> lane1_3600STDY6167810_CGCTTCCT_L001_17236_1     2 0.249
#> lane1_3600STDY6167811_CAAGACCT_L001_17236_1     1 0.000
#> lane1_3600STDY6167812_CACACACT_L001_17236_1     1 0.498
#> lane1_3600STDY6167813_CCTAGTAT_L001_17236_1     2 0.000
#> lane1_3600STDY6167814_CCACCGAT_L001_17236_1     1 0.000
#> lane1_3600STDY6167815_CTTCACAT_L001_17236_1     1 0.000
#> lane1_3600STDY6167816_CTATCATG_L001_17236_1     1 0.000
#> lane1_3600STDY6167817_CATGAATG_L001_17236_1     3 1.000
#> lane1_3600STDY6167818_CCACTTGG_L001_17236_1     1 0.000
#> lane1_3600STDY6167819_CTGTACGG_L001_17236_1     1 0.000
#> lane1_3600STDY6167820_CTAGATAG_L001_17236_1     1 0.000
#> lane1_3600STDY6167821_CACTCGAG_L001_17236_1     3 1.000
#> lane1_3600STDY6167822_CCGACAAG_L001_17236_1     1 0.000
#> lane1_3600STDY6167823_CTTGCTTC_L001_17236_1     1 0.000
#> lane1_3600STDY6167824_CATAGGTC_L001_17236_1     1 0.000
#> lane1_3600STDY6167825_CACATTGC_L001_17236_1     1 1.000
#> lane1_3600STDY6167826_CGCTAAGC_L001_17236_1     1 0.000
#> lane1_3600STDY6167827_CAACCTCC_L001_17236_1     1 0.000
#> lane1_3600STDY6167828_CAGCTGAC_L001_17236_1     1 0.000
#> lane1_3600STDY6167829_CTCAAGAC_L001_17236_1     1 0.000
#> lane1_3600STDY6167830_CGTGTCAC_L001_17236_1     1 0.000
#> lane1_3600STDY6167831_CCATGCAC_L001_17236_1     1 0.000
#> lane1_3600STDY6167832_CGTTACTA_L001_17236_1     1 1.000
#> lane1_3600STDY6167833_CAAGTAGA_L001_17236_1     1 0.000
#> lane1_3600STDY6167834_CTCTCTCA_L001_17236_1     1 0.000
#> lane1_3600STDY6167835_CGACTGCA_L001_17236_1     1 0.000
#> lane1_3600STDY6167836_CCTGAGCA_L001_17236_1     1 0.000
#> lane1_3600STDY6167837_CAGGCTAA_L001_17236_1     1 0.000
#> lane1_3600STDY6167838_CGGAGGAA_L001_17236_1     1 0.000
#> lane1_3600STDY6167839_AGGAGATT_L001_17236_1     1 0.000
#> lane1_3600STDY6167840_AGGCAGCT_L001_17236_1     1 0.000
#> lane1_3600STDY6167841_ACGTTCAT_L001_17236_1     3 1.000
#> lane1_3600STDY6167842_AACGTGTG_L001_17236_1     1 0.000
#> lane1_3600STDY6167843_AGACCGTG_L001_17236_1     3 1.000
#> lane1_3600STDY6167844_ACCTCTGG_L001_17236_1     2 0.000
#> lane1_3600STDY6167845_ATCCTAGG_L001_17236_1     1 0.000
#> lane1_3600STDY6167846_ATCAACCG_L001_17236_1     1 0.000
#> lane1_3600STDY6167847_AGGTCACG_L001_17236_1     2 0.000
#> lane1_3600STDY6167848_ACTGTTAG_L001_17236_1     1 0.000
#> lane1_3600STDY6167849_AAGAGTAG_L001_17236_1     1 0.000
#> lane1_3600STDY6167850_ATTCGGAG_L001_17236_1     1 0.000
#> lane1_3600STDY6167851_ACGCAATC_L001_17236_1     1 0.000
#> lane1_3600STDY6167852_ACAAGTGC_L001_17236_1     1 0.000
#> lane1_3600STDY6167853_ATGGATCC_L001_17236_1     1 0.000
#> lane1_3600STDY6167854_AGAGGACC_L001_17236_1     1 0.000
#> lane1_3600STDY6167855_ATCTCCAC_L001_17236_1     1 0.000
#> lane1_3600STDY6167856_ATTGGCTA_L001_17236_1     1 0.000
#> lane1_3600STDY6167857_AATCCTGA_L001_17236_1     2 0.000
#> lane1_3600STDY6167858_AGGATTCA_L001_17236_1     2 0.000
#> lane1_3600STDY6167859_AACTGGCA_L001_17236_1     1 0.000
#> lane1_3600STDY6167860_ACAACGCA_L001_17236_1     1 0.000
#> lane1_3600STDY6167861_CGGAAACA_L001_17236_1     2 0.000
#> lane1_3600STDY6167862_AATGAATT_L001_17236_1     1 0.000
#> lane1_3600STDY6167863_TAGGACCC_L001_17236_1     1 0.000
#> lane1_3600STDY6167864_TCTCAGTG_L001_17236_1     1 0.000
#> lane1_3600STDY6167865_CATGGGAA_L001_17236_1     1 0.000
#> lane1_3600STDY6167866_CCTAAGAT_L001_17236_1     1 0.000
#> lane1_3600STDY6167867_CTCAGATA_L001_17236_1     1 0.000
#> lane1_3600STDY6167868_CCCATAGG_L001_17236_1     1 0.000
#> lane1_3600STDY6167869_GCTATGAC_L001_17236_1     1 0.000
#> lane1_3600STDY6167870_GCTGTGAA_L001_17236_1     2 0.000
#> lane1_3600STDY6167871_ACCTTCAA_L001_17236_1     2 0.000
#> lane1_3600STDY6167872_ACAAAGCC_L001_17236_1     2 0.000
#> lane1_3600STDY6167873_CAAAACCG_L001_17236_1     2 0.000
#> lane1_3600STDY6167874_GCTGGACA_L001_17236_1     1 0.000
#> lane1_3600STDY6167875_AAGTCGTA_L001_17236_1     1 0.000
#> lane1_3600STDY6167876_CATCCGTA_L001_17236_1     1 0.000
#> lane1_3600STDY6167877_TTGTGTCT_L001_17236_1     1 0.000
#> lane1_3600STDY6167878_TGCTCTAG_L001_17236_1     1 0.000
#> lane1_3600STDY6167879_ACCCAACA_L001_17236_1     2 0.000
#> lane1_3600STDY6167880_CGATCTGA_L001_17236_1     1 0.000
#> lane1_3600STDY6167881_GTTCCACG_L001_17236_1     1 0.000
#> lane1_3600STDY6167882_ACTCTTTC_L001_17236_1     1 0.000
#> lane1_3600STDY6167883_TATTGGAG_L001_17236_1     2 0.000
#> lane1_3600STDY6167884_TAAACATA_L001_17236_1     2 0.000
#> lane1_3600STDY6167885_GTAAGATA_L001_17236_1     3 1.000
#> lane1_3600STDY6167886_TACCGCAA_L001_17236_1     1 0.000
#> lane1_3600STDY6167887_TATCTCCT_L001_17236_1     3 0.747
#> lane1_3600STDY6167888_TGTCATCT_L001_17236_1     1 0.000
#> lane1_3600STDY6167889_ATAGCTCT_L001_17236_1     1 0.000
#> lane1_3600STDY6167890_AGTCCAAC_L001_17236_1     1 0.000
#> lane1_3600STDY6167891_TTTGGGCA_L001_17236_1     1 0.000
#> lane1_3600STDY6167892_TCTGACGC_L001_17236_1     1 0.000
#> lane1_3600STDY6167893_TGTCGACT_L001_17236_1     1 0.000
#> lane1_3600STDY6167894_GTCACGTA_L001_17236_1     1 0.000
#> lane1_3600STDY6167895_TTGAGCGA_L001_17236_1     1 0.000
#> lane1_3600STDY6167896_GAGACATA_L001_17236_1     1 0.000
#> lane1_3600STDY6167897_GTCAAGCT_L001_17236_1     2 1.000
#> lane1_3600STDY6167898_AGCAAGTT_L001_17236_1     3 1.000
#> lane1_3600STDY6167899_GACGCTCA_L001_17236_1     1 0.000
#> lane1_3600STDY6167900_ACGGCAGC_L001_17236_1     3 1.000
#> lane1_3600STDY6167901_AGAACTGA_L001_17236_1     3 1.000
#> lane1_3600STDY6167902_CGCCTTTG_L001_17236_1     1 0.000
#> lane1_3600STDY6167903_TAAGGTCA_L001_17236_1     1 0.000
#> lane1_3600STDY6167904_ACGTTGGC_L001_17236_1     1 0.000
#> lane1_3600STDY6167905_CCAGCTTA_L001_17236_1     1 0.000
#> lane1_3600STDY6167906_GAATCCTA_L001_17236_1     1 0.000
#> lane1_3600STDY6167907_ACTTCGTA_L001_17236_1     1 0.000
#> lane1_3600STDY6167908_TAGTCGGT_L001_17236_1     2 0.000
#> lane1_3600STDY6167909_CGCACGAG_L001_17236_1     1 0.000
#> lane1_3600STDY6167910_ACGTACTA_L001_17236_1     1 0.000
#> lane1_3600STDY6167911_AGCGCCAA_L001_17236_1     1 0.000
#> lane1_3600STDY6167912_GCCTGCCC_L001_17236_1     1 0.000
#> lane1_3600STDY6167913_AGGACGAT_L001_17236_1     1 0.000
#> lane1_3600STDY6167914_CTTGACCG_L001_17236_1     1 0.000
#> lane1_3600STDY6167915_AGGTCTAA_L001_17236_1     1 0.000
#> lane1_3600STDY6167916_CGAGATCC_L001_17236_1     1 0.000
#> lane1_3600STDY6167917_ATTAGCGG_L001_17236_1     1 0.000
#> lane1_3600STDY6167918_GCGCTGAT_L001_17236_1     2 0.000
#> lane1_3600STDY6167919_TGCTGAAC_L001_17236_1     1 0.000
#> lane1_3600STDY6167920_GAGGGCAG_L001_17236_1     2 0.000
#> lane1_3600STDY6167921_GTTTTCAC_L001_17236_1     1 0.000
#> lane1_3600STDY6167922_GAGATGCC_L001_17236_1     1 0.000
#> lane1_3600STDY6167923_TTGAGAAG_L001_17236_1     1 0.000
#> lane1_3600STDY6167924_GCATCCGG_L001_17236_1     1 0.000
#> lane1_3600STDY6167925_GTCACCAG_L001_17236_1     1 0.000
#> lane1_3600STDY6167926_GAGGTCGC_L001_17236_1     3 1.000
#> lane1_3600STDY6167927_AAGGGGTA_L001_17236_1     1 0.000
#> lane1_3600STDY6167928_TTTTACGT_L001_17236_1     1 0.000
#> lane1_3600STDY6167929_TTCCTACA_L001_17236_1     1 0.000
#> lane1_3600STDY6167930_AGTGTAGT_L001_17236_1     1 0.000
#> lane1_3600STDY6167931_GTGGCCAA_L001_17236_1     1 0.000
#> lane1_3600STDY6167932_AAATACTC_L001_17236_1     1 0.000
#> lane1_3600STDY6167933_CACCCGTC_L001_17236_1     1 0.000
#> lane1_3600STDY6167934_TCGTGGTT_L001_17236_1     1 0.000
#> lane1_3600STDY6167935_ACTTGGGG_L001_17236_1     1 0.000
#> lane1_3600STDY6167936_GGCTGCTT_L001_17236_1     1 0.000
#> lane1_3600STDY6167937_CAGGGTCG_L001_17236_1     1 0.000
#> lane1_3600STDY6167938_CTCGTCGA_L001_17236_1     1 0.000
#> lane1_3600STDY6167939_TCTACAGT_L001_17236_1     1 0.000
#> lane1_3600STDY6167940_CTTCTAGA_L001_17236_1     3 1.000
#> lane1_3600STDY6167941_AACGGCTT_L001_17236_1     1 0.000
#> lane1_3600STDY6167942_ATAAGACT_L001_17236_1     1 0.000
#> lane1_3600STDY6167943_GTTTTTCG_L001_17236_1     1 0.000
#> lane1_3600STDY6167944_ATTGGTAT_L001_17236_1     1 0.000
#> lane1_3600STDY6167945_CGCCAGTA_L001_17236_1     1 0.000
#> lane1_3600STDY6167946_AAGCCGAA_L001_17236_1     1 0.000
#> lane1_3600STDY6167947_TGACCCAC_L001_17236_1     1 0.000
#> lane1_3600STDY6167948_ATTGCACA_L001_17236_1     1 0.000
#> lane1_3600STDY6167949_CTTTTGAT_L001_17236_1     1 0.000
#> lane1_3600STDY6167950_TAGCGAGA_L001_17236_1     2 0.000
#> lane1_3600STDY6167951_TTCGCAGG_L001_17236_1     1 0.000
#> lane1_3600STDY6167952_TAGTTATT_L001_17236_1     1 0.000
#> lane1_3600STDY6167953_TCCTCCGA_L001_17236_1     1 0.000
#> lane1_3600STDY6167954_GCGGGTCT_L001_17236_1     1 0.000
#> lane1_3600STDY6167955_GATTCTAT_L001_17236_1     1 0.000
#> lane1_3600STDY6167956_ATGCAAAG_L001_17236_1     1 0.000
#> lane1_3600STDY6167957_GTCTGAGG_L001_17236_1     1 0.000
#> lane1_3600STDY6167958_TCTGGCGA_L001_17236_1     1 0.000
#> lane1_3600STDY6167959_AATTTGCG_L001_17236_1     1 1.000
#> lane1_3600STDY6167960_TGGGTTGG_L001_17236_1     3 0.000
#> lane1_3600STDY6167961_AGTTGAAA_L001_17236_1     1 0.000
#> lane1_3600STDY6167962_GACCGGAA_L001_17236_1     1 0.000
#> lane1_3600STDY6167963_GATCGAAC_L001_17236_1     1 0.000
#> lane1_3600STDY6167964_GTATAGGG_L001_17236_1     1 0.000
#> lane1_3600STDY6167965_GGTAAGAG_L001_17236_1     2 0.000
#> lane1_3600STDY6167966_AGTCCGAT_L001_17236_1     1 0.000
#> lane1_3600STDY6167967_ATACAGGC_L001_17236_1     1 0.000
#> lane1_3600STDY6167968_TGAGACTC_L001_17236_1     1 0.000
#> lane1_3600STDY6167969_ACTCAGGA_L001_17236_1     1 0.000
#> lane1_3600STDY6167970_GTGTCTGA_L001_17236_1     3 1.000
#> lane1_3600STDY6167971_CTTGAATC_L001_17236_1     1 0.000
#> lane1_3600STDY6167972_CCGCATGA_L001_17236_1     1 0.000
#> lane1_3600STDY6167973_AAGTAACA_L001_17236_1     1 0.000
#> lane1_3600STDY6167974_GTGGTACT_L001_17236_1     1 1.000
#> lane1_3600STDY6167975_AGCTGTGC_L001_17236_1     1 0.000
#> lane1_3600STDY6167976_TTACCTTC_L001_17236_1     1 0.000
#> lane1_3600STDY6167977_TCCGGGTA_L001_17236_1     1 0.000
#> lane1_3600STDY6167978_CTACGTAA_L001_17236_1     1 0.000
#> lane1_3600STDY6167979_TCGGACCG_L001_17236_1     1 0.000
#> lane1_3600STDY6167980_ATGCGTCG_L001_17236_1     1 0.000
#> lane1_3600STDY6167981_TTCTTAGC_L001_17236_1     1 0.000
#> lane1_3600STDY6167982_TGAGTAAG_L001_17236_1     1 0.000
#> lane1_3600STDY6167983_AAGTGATA_L001_17236_1     1 1.000
#> lane1_3600STDY6167984_TCGATGCG_L001_17236_1     1 0.000
#> lane1_3600STDY6167985_TATTCTGG_L001_17236_1     1 0.000
#> lane1_3600STDY6167986_AGCCGTGA_L001_17236_1     1 0.000
#> lane1_3600STDY6167987_AAGCCTTC_L001_17236_1     1 0.000
#> lane1_3600STDY6167988_AGGTATCC_L001_17236_1     1 0.000
#> lane1_3600STDY6167989_AGGATCTC_L001_17236_1     2 0.000
#> lane1_3600STDY6167990_CTGTTTGA_L001_17236_1     1 0.000
#> lane1_3600STDY6167991_GGAATTTC_L001_17236_1     1 0.000
#> lane1_3600STDY6167992_TTGGAGCA_L001_17236_1     3 1.000
#> lane1_3600STDY6167993_AAGGTCTG_L001_17236_1     3 0.249
#> lane1_3600STDY6167994_AATTAGGC_L001_17236_1     1 0.000
#> lane1_3600STDY6167995_AATCGGGT_L001_17236_1     1 0.000
#> lane1_3600STDY6167996_AGGTAGAC_L001_17236_1     1 0.000
#> lane1_3600STDY6167997_CTTATTCC_L001_17236_1     1 0.000
#> lane1_3600STDY6167998_CAGGCTCT_L001_17236_1     1 0.000
#> lane1_3600STDY6167999_AAAGCACG_L001_17236_1     1 0.000
#> lane1_3600STDY6168000_GTATACAC_L001_17236_1     1 0.000
#> lane1_3600STDY6168001_GGACATAT_L001_17236_1     1 0.000
#> lane1_3600STDY6168002_CGGTTGGG_L001_17236_1     1 0.000
#> lane1_3600STDY6168003_GTCCGTGA_L001_17236_1     1 0.000
#> lane1_3600STDY6168004_GCCGAACC_L001_17236_1     1 0.000
#> lane1_3600STDY6168005_ACTTTACT_L001_17236_1     3 1.000
#> lane1_3600STDY6168006_GGGTCCAT_L001_17236_1     1 0.000
#> lane1_3600STDY6168007_ATAACTAG_L001_17236_1     1 0.000
#> lane1_3600STDY6168008_AATAGAGA_L001_17236_1     1 0.000
#> lane1_3600STDY6168009_TCACCATT_L001_17236_1     1 0.000
#> lane1_3600STDY6168010_CGCCTGAT_L001_17236_1     1 0.000
#> lane1_3600STDY6168011_GCGTGAAC_L001_17236_1     1 0.000
#> lane1_3600STDY6168012_TAAGGGTG_L001_17236_1     1 0.000
#> lane1_3600STDY6168013_GGTGTCGA_L001_17236_1     1 0.000
#> lane1_3600STDY6168014_CCGTTAGG_L001_17236_1     1 0.000
#> lane1_3600STDY6168015_TGGCAAAA_L001_17236_1     1 1.000
#> lane1_3600STDY6168016_CCTACCCG_L001_17236_1     2 0.000
#> lane1_3600STDY6168017_AACAGCGC_L001_17236_1     1 0.000
#> lane1_3600STDY6168018_TATACATC_L001_17236_1     2 0.000
#> lane1_3600STDY6168019_AAGCGACT_L001_17236_1     1 0.000
#> lane1_3600STDY6168020_GAAGCGCA_L001_17236_1     1 0.000
#> lane1_3600STDY6168021_ACCTCTAC_L001_17236_1     1 0.000
#> lane1_3600STDY6168022_GATTGCGT_L001_17236_1     1 0.000
#> lane1_3600STDY6168023_GCTGGTTG_L001_17236_1     2 0.000
#> lane1_3600STDY6168024_ATCGTCCT_L001_17236_1     1 0.000
#> lane1_3600STDY6168025_GGACACGG_L001_17236_1     1 0.000
#> lane1_3600STDY6168026_CGCACCTA_L001_17236_1     1 0.000
#> lane1_3600STDY6168027_CTTCGGCT_L001_17236_1     1 0.000
#> lane1_3600STDY6168028_CGAATCGA_L001_17236_1     1 0.000
#> lane1_3600STDY6168029_TAACAACT_L001_17236_1     1 0.000
#> lane1_3600STDY6168030_AGCTCTTT_L001_17236_1     1 0.000
#> lane1_3600STDY6168031_TAATCCCT_L001_17236_1     1 0.000
#> lane1_3600STDY6168032_AGGACACT_L001_17236_1     3 1.000
#> lane1_3600STDY6168033_TTACACTA_L001_17236_1     1 0.000
#> lane1_3600STDY6168034_AAACATCA_L001_17236_1     1 0.000
#> lane1_3600STDY6168035_CCATAGCT_L001_17236_1     1 0.000
#> lane1_3600STDY6168036_GTTATGGC_L001_17236_1     1 0.000
#> lane1_3600STDY6168037_ATCCCCTA_L001_17236_1     1 0.000
#> lane1_3600STDY6168038_CATACTAC_L001_17236_1     1 0.000
#> lane1_3600STDY6168039_CAATTGTT_L001_17236_1     1 0.000
#> lane1_3600STDY6168040_AAACCCGT_L001_17236_1     2 0.000
#> lane1_3600STDY6168041_CAGATTTC_L001_17236_1     1 0.000
#> lane1_3600STDY6168042_GCGTAGGT_L001_17236_1     1 0.000
#> lane1_3600STDY6168043_GGCATTCG_L001_17236_1     1 0.000
#> lane1_3600STDY6168044_TGGGGCTT_L001_17236_1     1 0.000
#> lane1_3600STDY6168045_CTGACTAC_L001_17236_1     1 0.000
#> lane1_3600STDY6168046_AACTTTTA_L001_17236_1     3 1.000
#> lane1_3600STDY6168047_AGGGATTC_L001_17236_1     1 0.000
#> lane1_3600STDY6168048_CCGAGTAG_L001_17236_1     1 0.000
#> lane1_3600STDY6168049_GGGGACTA_L001_17236_1     1 0.000
#> lane1_3600STDY6168050_GGAGTTGA_L001_17236_1     1 0.000
#> lane1_3600STDY6168051_AGCTCATC_L001_17236_1     1 0.000
#> lane1_3600STDY6168052_TAATCAAC_L001_17236_1     1 0.000
#> lane1_3600STDY6168053_ACTGGTCG_L001_17236_1     1 0.000
#> lane1_3600STDY6168054_GACGATTG_L001_17236_1     1 0.000
#> lane1_3600STDY6168055_AGCGATGA_L001_17236_1     1 0.000
#> lane1_3600STDY6168056_GAAGAGAT_L001_17236_1     3 1.000
#> lane1_3600STDY6168057_CGTATGCA_L001_17236_1     1 0.000
#> lane1_3600STDY6168058_CACGTGCG_L001_17236_1     1 0.000
#> lane1_3600STDY6168059_GCTTAAAC_L001_17236_1     1 0.000
#> lane1_3600STDY6168060_GTTCCGCA_L001_17236_1     1 0.000
#> lane1_3600STDY6168061_GTATCGTC_L001_17236_1     1 0.000
#> lane1_3600STDY6168062_GTCCTCAC_L001_17236_1     1 0.000
#> lane1_3600STDY6168063_GTACGGAC_L001_17236_1     2 0.000
#> lane1_3600STDY6168064_CATTTTGC_L001_17236_1     2 0.000
#> lane1_3600STDY6168065_TCCTCTCT_L001_17236_1     1 0.000
#> lane1_3600STDY6168066_AGCAACGA_L001_17236_1     1 0.000
#> lane1_3600STDY6168067_ACAGAAGA_L001_17236_1     1 0.000
#> lane1_3600STDY6168068_CGACCCTT_L001_17236_1     1 0.000
#> lane1_3600STDY6168069_CTGCCTAG_L001_17236_1     2 0.000
#> lane1_3600STDY6168070_GAGCGCAT_L001_17236_1     1 0.000
#> lane1_3600STDY6168071_AACTTATC_L001_17236_1     1 0.000
#> lane1_3600STDY6168072_CCGATGTA_L001_17236_1     1 0.000
#> lane1_3600STDY6168073_TTACTACC_L001_17236_1     1 0.000
#> lane1_3600STDY6168074_CAAGGAGC_L001_17236_1     1 1.000
#> lane1_3600STDY6168075_TGGTTGAC_L001_17236_1     2 0.000
#> lane1_3600STDY6168076_ACCTGCTG_L001_17236_1     2 0.000
#> lane4_3600STDY6184181_ATCACGTT_L004_17480_1     3 0.000
#> lane4_3600STDY6184182_CGATGTTT_L004_17480_1     3 0.000
#> lane4_3600STDY6184183_TTAGGCAT_L004_17480_1     3 0.000
#> lane4_3600STDY6184184_TGACCACT_L004_17480_1     3 0.000
#> lane4_3600STDY6184185_ACAGTGGT_L004_17480_1     3 0.000
#> lane4_3600STDY6184186_GCCAATGT_L004_17480_1     3 0.000
#> lane4_3600STDY6184187_CAGATCTG_L004_17480_1     3 0.000
#> lane4_3600STDY6184188_ACTTGATG_L004_17480_1     2 0.000
#> lane4_3600STDY6184189_GATCAGCG_L004_17480_1     3 0.000
#> lane4_3600STDY6184190_TAGCTTGT_L004_17480_1     3 0.000
#> lane4_3600STDY6184191_GGCTACAG_L004_17480_1     3 0.000
#> lane4_3600STDY6184192_CTTGTACT_L004_17480_1     2 0.000
#> lane4_3600STDY6184193_TGGTTGTT_L004_17480_1     3 0.000
#> lane4_3600STDY6184194_TCTCGGTT_L004_17480_1     3 0.000
#> lane4_3600STDY6184195_TAAGCGTT_L004_17480_1     3 0.000
#> lane4_3600STDY6184196_TCCGTCTT_L004_17480_1     3 0.000
#> lane4_3600STDY6184197_TGTACCTT_L004_17480_1     3 0.000
#> lane4_3600STDY6184198_TTCTGTGT_L004_17480_1     3 0.000
#> lane4_3600STDY6184199_TCTGCTGT_L004_17480_1     2 1.000
#> lane4_3600STDY6184200_TTGGAGGT_L004_17480_1     2 1.000
#> lane4_3600STDY6184201_TCGAGCGT_L004_17480_1     3 0.000
#> lane4_3600STDY6184202_TGATACGT_L004_17480_1     3 0.000
#> lane4_3600STDY6184203_TGCATAGT_L004_17480_1     3 0.000
#> lane4_3600STDY6184204_TTGACTCT_L004_17480_1     3 0.000
#> lane4_3600STDY6184205_TGCGATCT_L004_17480_1     3 0.000
#> lane4_3600STDY6184206_TTCCTGCT_L004_17480_1     3 0.000
#> lane4_3600STDY6184207_TAGTGACT_L004_17480_1     3 0.000
#> lane4_3600STDY6184208_TACAGGAT_L004_17480_1     2 1.000
#> lane4_3600STDY6184209_TCCTCAAT_L004_17480_1     3 1.000
#> lane4_3600STDY6184210_TGTGGTTG_L004_17480_1     3 1.000
#> lane4_3600STDY6184211_TAGTCTTG_L004_17480_1     2 1.000
#> lane4_3600STDY6184212_TTCCATTG_L004_17480_1     2 0.000
#> lane4_3600STDY6184213_TCGAAGTG_L004_17480_1     2 0.000
#> lane4_3600STDY6184214_TAACGCTG_L004_17480_1     3 1.000
#> lane4_3600STDY6184215_TTGGTATG_L004_17480_1     2 1.000
#> lane4_3600STDY6184216_TGAACTGG_L004_17480_1     2 0.000
#> lane4_3600STDY6184217_TACTTCGG_L004_17480_1     2 0.751
#> lane4_3600STDY6184218_TCTCACGG_L004_17480_1     3 0.000
#> lane4_3600STDY6184219_TCAGGAGG_L004_17480_1     2 1.000
#> lane4_3600STDY6184220_TAAGTTCG_L004_17480_1     3 0.000
#> lane4_3600STDY6184221_TCCAGTCG_L004_17480_1     3 0.000
#> lane4_3600STDY6184222_TGTATGCG_L004_17480_1     2 0.000
#> lane4_3600STDY6184223_TCATTGAG_L004_17480_1     2 1.000
#> lane4_3600STDY6184224_TGGCTCAG_L004_17480_1     2 0.249
#> lane4_3600STDY6184225_TATGCCAG_L004_17480_1     3 0.000
#> lane4_3600STDY6184226_TCAGATTC_L004_17480_1     3 0.000
#> lane4_3600STDY6184227_TACTAGTC_L004_17480_1     2 1.000
#> lane4_3600STDY6184228_TTCAGCTC_L004_17480_1     3 0.000
#> lane4_3600STDY6184229_TGTCTATC_L004_17480_1     3 0.000
#> lane4_3600STDY6184230_TATGTGGC_L004_17480_1     2 1.000
#> lane4_3600STDY6184231_TTACTCGC_L004_17480_1     2 1.000
#> lane4_3600STDY6184232_TCGTTAGC_L004_17480_1     3 1.000
#> lane4_3600STDY6184233_TACCGAGC_L004_17480_1     3 0.000
#> lane4_3600STDY6184234_TGTTCTCC_L004_17480_1     2 0.000
#> lane4_3600STDY6184235_TTCGCACC_L004_17480_1     3 0.000
#> lane4_3600STDY6184236_TTGCGTAC_L004_17480_1     3 0.000
#> lane4_3600STDY6184237_TCTACGAC_L004_17480_1     3 0.000
#> lane4_3600STDY6184238_TGACAGAC_L004_17480_1     2 0.751
#> lane4_3600STDY6184239_TAGAACAC_L004_17480_1     2 1.000
#> lane4_3600STDY6184240_TCATCCTA_L004_17480_1     2 1.000
#> lane4_3600STDY6184241_TGCTGATA_L004_17480_1     3 0.000
#> lane4_3600STDY6184242_TAGACGGA_L004_17480_1     3 0.000
#> lane4_3600STDY6184243_TGTGAAGA_L004_17480_1     3 0.000
#> lane4_3600STDY6184244_TCTCTTCA_L004_17480_1     2 0.751
#> lane4_3600STDY6184245_TTGTTCCA_L004_17480_1     3 0.000
#> lane4_3600STDY6184246_TGAAGCCA_L004_17480_1     2 0.000
#> lane4_3600STDY6184247_TACCACCA_L004_17480_1     2 0.000
#> lane4_3600STDY6184248_TGCGTGAA_L004_17480_1     2 1.000
#> lane4_3600STDY6184249_GGTGAGTT_L004_17480_1     3 0.000
#> lane4_3600STDY6184250_GATCTCTT_L004_17480_1     3 0.000
#> lane4_3600STDY6184251_GTGTCCTT_L004_17480_1     3 0.000
#> lane4_3600STDY6184252_GACGGATT_L004_17480_1     3 0.000
#> lane4_3600STDY6184253_GCAACATT_L004_17480_1     3 0.000
#> lane4_3600STDY6184254_GGTCGTGT_L004_17480_1     2 0.000
#> lane4_3600STDY6184255_GAATCTGT_L004_17480_1     3 0.000
#> lane4_3600STDY6184256_GTACATCT_L004_17480_1     2 1.000
#> lane4_3600STDY6184257_GAGGTGCT_L004_17480_1     2 1.000
#> lane4_3600STDY6184258_GCATGGCT_L004_17480_1     2 1.000
#> lane4_3600STDY6184259_GTTAGCCT_L004_17480_1     2 1.000
#> lane4_3600STDY6184260_GTCGCTAT_L004_17480_1     2 0.000
#> lane4_3600STDY6184261_GGAATGAT_L004_17480_1     2 0.000
#> lane4_3600STDY6184262_GAGCCAAT_L004_17480_1     2 1.000
#> lane4_3600STDY6184263_GCTCCTTG_L004_17480_1     2 0.498
#> lane4_3600STDY6184264_GTAAGGTG_L004_17480_1     2 0.000
#> lane4_3600STDY6184265_GAGGATGG_L004_17480_1     2 0.000
#> lane4_3600STDY6184266_GTTGTCGG_L004_17480_1     3 0.000
#> lane4_3600STDY6184267_GGATTAGG_L004_17480_1     2 0.253
#> lane4_3600STDY6184268_GATAGAGG_L004_17480_1     2 1.000
#> lane4_3600STDY6184269_GTGTGTCG_L004_17480_1     3 0.000
#> lane4_3600STDY6184270_GCAATCCG_L004_17480_1     2 0.751
#> lane4_3600STDY6184271_GACCTTAG_L004_17480_1     2 0.000
#> lane4_3600STDY6184272_GCCTGTTC_L004_17480_1     2 0.000
#> lane4_3600STDY6184273_GCACTGTC_L004_17480_1     2 0.502
#> lane4_3600STDY6184274_GCTAACTC_L004_17480_1     3 0.000
#> lane4_3600STDY6184275_GATTCATC_L004_17480_1     2 0.502
#> lane4_3600STDY6184276_GTCTTGGC_L004_17480_1     3 0.000
#> lane4_3600STDY6184277_GTAGAAGC_L004_17480_1     3 0.000
#> lane4_3600STDY6184278_GATGGTCC_L004_17480_1     3 0.000
#> lane4_3600STDY6184279_GTGCTACC_L004_17480_1     3 0.000
#> lane4_3600STDY6184280_GCGATTAC_L004_17480_1     2 0.751
#> lane4_3600STDY6184281_GGTTGGAC_L004_17480_1     3 0.000
#> lane4_3600STDY6184282_GGCACAAC_L004_17480_1     2 0.000
#> lane4_3600STDY6184283_GACACTTA_L004_17480_1     2 0.000
#> lane4_3600STDY6184284_GTGCAGTA_L004_17480_1     3 0.000
#> lane4_3600STDY6184285_GGAGTCTA_L004_17480_1     2 1.000
#> lane4_3600STDY6184286_GCTATGGA_L004_17480_1     2 0.000
#> lane4_3600STDY6184287_GAGTGCGA_L004_17480_1     2 1.000
#> lane4_3600STDY6184288_GTAACCGA_L004_17480_1     2 1.000
#> lane4_3600STDY6184289_GGCAAGCA_L004_17480_1     3 0.502
#> lane4_3600STDY6184290_GCCTTACA_L004_17480_1     2 0.000
#> lane4_3600STDY6184291_GAACGACA_L004_17480_1     3 0.000
#> lane4_3600STDY6184292_GCAGGTAA_L004_17480_1     3 0.000
#> lane4_3600STDY6184293_GCGTCGAA_L004_17480_1     3 0.000
#> lane4_3600STDY6184294_CGTTCGGT_L004_17480_1     2 0.000
#> lane4_3600STDY6184295_CACCAGGT_L004_17480_1     2 0.498
#> lane4_3600STDY6184296_CTGCGAGT_L004_17480_1     3 0.000
#> lane4_3600STDY6184297_CCGTATCT_L004_17480_1     2 0.000
#> lane4_3600STDY6184298_CGCTTCCT_L004_17480_1     3 0.000
#> lane4_3600STDY6184299_CAAGACCT_L004_17480_1     2 0.000
#> lane4_3600STDY6184300_CACACACT_L004_17480_1     3 0.000
#> lane4_3600STDY6184301_CCTAGTAT_L004_17480_1     3 0.000
#> lane4_3600STDY6184302_CCACCGAT_L004_17480_1     3 0.000
#> lane4_3600STDY6184303_CTTCACAT_L004_17480_1     3 0.000
#> lane4_3600STDY6184304_CTATCATG_L004_17480_1     3 0.000
#> lane4_3600STDY6184305_CATGAATG_L004_17480_1     3 0.000
#> lane4_3600STDY6184306_CCACTTGG_L004_17480_1     2 0.000
#> lane4_3600STDY6184307_CTGTACGG_L004_17480_1     2 0.000
#> lane4_3600STDY6184308_CTAGATAG_L004_17480_1     3 0.000
#> lane4_3600STDY6184309_CACTCGAG_L004_17480_1     2 0.000
#> lane4_3600STDY6184310_CCGACAAG_L004_17480_1     3 0.000
#> lane4_3600STDY6184311_CTTGCTTC_L004_17480_1     2 1.000
#> lane4_3600STDY6184312_CATAGGTC_L004_17480_1     2 0.000
#> lane4_3600STDY6184313_CACATTGC_L004_17480_1     2 1.000
#> lane4_3600STDY6184314_CGCTAAGC_L004_17480_1     2 1.000
#> lane4_3600STDY6184315_CAACCTCC_L004_17480_1     3 0.000
#> lane4_3600STDY6184316_CAGCTGAC_L004_17480_1     3 0.000
#> lane4_3600STDY6184317_CTCAAGAC_L004_17480_1     2 0.502
#> lane4_3600STDY6184318_CGTGTCAC_L004_17480_1     2 1.000
#> lane4_3600STDY6184319_CCATGCAC_L004_17480_1     2 0.000
#> lane4_3600STDY6184320_CGTTACTA_L004_17480_1     3 0.502
#> lane4_3600STDY6184321_CAAGTAGA_L004_17480_1     2 1.000
#> lane4_3600STDY6184322_CTCTCTCA_L004_17480_1     2 0.253
#> lane4_3600STDY6184323_CGACTGCA_L004_17480_1     2 1.000
#> lane4_3600STDY6184324_CCTGAGCA_L004_17480_1     2 0.000
#> lane4_3600STDY6184325_CAGGCTAA_L004_17480_1     3 0.000
#> lane4_3600STDY6184326_CGGAGGAA_L004_17480_1     2 0.000
#> lane4_3600STDY6184327_AGGAGATT_L004_17480_1     3 0.000
#> lane4_3600STDY6184328_AGGCAGCT_L004_17480_1     2 1.000
#> lane4_3600STDY6184329_ACGTTCAT_L004_17480_1     3 0.000
#> lane4_3600STDY6184330_AACGTGTG_L004_17480_1     3 0.000
#> lane4_3600STDY6184331_AGACCGTG_L004_17480_1     2 0.000
#> lane4_3600STDY6184332_ACCTCTGG_L004_17480_1     2 0.249
#> lane4_3600STDY6184333_ATCCTAGG_L004_17480_1     3 0.000
#> lane4_3600STDY6184334_ATCAACCG_L004_17480_1     3 0.502
#> lane4_3600STDY6184335_AGGTCACG_L004_17480_1     3 0.000
#> lane4_3600STDY6184336_ACTGTTAG_L004_17480_1     2 0.000
#> lane4_3600STDY6184337_AAGAGTAG_L004_17480_1     2 1.000
#> lane4_3600STDY6184338_ATTCGGAG_L004_17480_1     2 1.000
#> lane4_3600STDY6184339_ACGCAATC_L004_17480_1     2 1.000
#> lane4_3600STDY6184340_ACAAGTGC_L004_17480_1     2 0.000
#> lane4_3600STDY6184341_ATGGATCC_L004_17480_1     2 1.000
#> lane4_3600STDY6184342_AGAGGACC_L004_17480_1     2 0.000
#> lane4_3600STDY6184343_ATCTCCAC_L004_17480_1     2 1.000
#> lane4_3600STDY6184344_ATTGGCTA_L004_17480_1     2 1.000
#> lane4_3600STDY6184345_AATCCTGA_L004_17480_1     3 0.000
#> lane4_3600STDY6184346_AGGATTCA_L004_17480_1     2 0.000
#> lane4_3600STDY6184347_AACTGGCA_L004_17480_1     2 0.000
#> lane4_3600STDY6184348_ACAACGCA_L004_17480_1     2 0.000
#> lane4_3600STDY6184349_CGGAAACA_L004_17480_1     3 0.000
#> lane4_3600STDY6184350_AATGAATT_L004_17480_1     3 0.000
#> lane4_3600STDY6184351_TAGGACCC_L004_17480_1     3 1.000
#> lane4_3600STDY6184352_TCTCAGTG_L004_17480_1     2 0.000
#> lane4_3600STDY6184353_CATGGGAA_L004_17480_1     3 0.000
#> lane4_3600STDY6184354_CCTAAGAT_L004_17480_1     2 1.000
#> lane4_3600STDY6184355_CTCAGATA_L004_17480_1     2 1.000
#> lane4_3600STDY6184356_CCCATAGG_L004_17480_1     2 1.000
#> lane4_3600STDY6184357_GCTATGAC_L004_17480_1     2 0.000
#> lane4_3600STDY6184358_GCTGTGAA_L004_17480_1     2 0.000
#> lane4_3600STDY6184359_ACCTTCAA_L004_17480_1     2 0.000
#> lane4_3600STDY6184360_ACAAAGCC_L004_17480_1     2 0.000
#> lane4_3600STDY6184361_CAAAACCG_L004_17480_1     2 0.000
#> lane4_3600STDY6184362_GCTGGACA_L004_17480_1     3 0.000
#> lane4_3600STDY6184363_AAGTCGTA_L004_17480_1     2 0.000
#> lane4_3600STDY6184364_CATCCGTA_L004_17480_1     2 0.000
#> lane4_3600STDY6184365_TTGTGTCT_L004_17480_1     2 0.000
#> lane4_3600STDY6184366_TGCTCTAG_L004_17480_1     2 1.000
#> lane4_3600STDY6184367_ACCCAACA_L004_17480_1     2 0.000
#> lane4_3600STDY6184368_CGATCTGA_L004_17480_1     2 1.000
#> lane4_3600STDY6184369_GTTCCACG_L004_17480_1     2 1.000
#> lane4_3600STDY6184370_ACTCTTTC_L004_17480_1     2 0.751
#> lane4_3600STDY6184371_TATTGGAG_L004_17480_1     2 0.000
#> lane4_3600STDY6184372_TAAACATA_L004_17480_1     2 0.000
#> lane4_3600STDY6184373_GTAAGATA_L004_17480_1     2 0.000
#> lane4_3600STDY6184374_TACCGCAA_L004_17480_1     3 0.000
#> lane4_3600STDY6184375_TATCTCCT_L004_17480_1     3 0.000
#> lane4_3600STDY6184376_TGTCATCT_L004_17480_1     3 0.000
#> lane4_3600STDY6184377_ATAGCTCT_L004_17480_1     3 0.000
#> lane4_3600STDY6184378_AGTCCAAC_L004_17480_1     3 0.000
#> lane4_3600STDY6184379_TTTGGGCA_L004_17480_1     3 0.000
#> lane4_3600STDY6184380_TCTGACGC_L004_17480_1     3 0.000
#> lane4_3600STDY6184381_TGTCGACT_L004_17480_1     3 0.000
#> lane4_3600STDY6184382_GTCACGTA_L004_17480_1     3 0.000
#> lane4_3600STDY6184383_TTGAGCGA_L004_17480_1     3 0.000
#> lane4_3600STDY6184384_GAGACATA_L004_17480_1     3 0.000
#> lane4_3600STDY6184385_GTCAAGCT_L004_17480_1     3 0.000
#> lane4_3600STDY6184386_AGCAAGTT_L004_17480_1     3 0.000
#> lane4_3600STDY6184387_GACGCTCA_L004_17480_1     3 0.000
#> lane4_3600STDY6184388_ACGGCAGC_L004_17480_1     2 1.000
#> lane4_3600STDY6184389_AGAACTGA_L004_17480_1     2 1.000
#> lane4_3600STDY6184390_CGCCTTTG_L004_17480_1     2 0.000
#> lane4_3600STDY6184391_TAAGGTCA_L004_17480_1     2 0.000
#> lane4_3600STDY6184392_ACGTTGGC_L004_17480_1     2 0.000
#> lane4_3600STDY6184393_CCAGCTTA_L004_17480_1     3 0.000
#> lane4_3600STDY6184394_GAATCCTA_L004_17480_1     3 0.000
#> lane4_3600STDY6184395_ACTTCGTA_L004_17480_1     3 0.000
#> lane4_3600STDY6184396_TAGTCGGT_L004_17480_1     3 0.000
#> lane4_3600STDY6184397_CGCACGAG_L004_17480_1     3 0.000
#> lane4_3600STDY6184398_ACGTACTA_L004_17480_1     3 0.000
#> lane4_3600STDY6184399_AGCGCCAA_L004_17480_1     3 0.000
#> lane4_3600STDY6184400_GCCTGCCC_L004_17480_1     3 0.000
#> lane4_3600STDY6184401_AGGACGAT_L004_17480_1     2 1.000
#> lane4_3600STDY6184402_CTTGACCG_L004_17480_1     3 0.000
#> lane4_3600STDY6184403_AGGTCTAA_L004_17480_1     2 1.000
#> lane4_3600STDY6184404_CGAGATCC_L004_17480_1     3 0.000
#> lane4_3600STDY6184405_ATTAGCGG_L004_17480_1     3 0.000
#> lane4_3600STDY6184406_GCGCTGAT_L004_17480_1     3 0.000
#> lane4_3600STDY6184407_TGCTGAAC_L004_17480_1     3 0.000
#> lane4_3600STDY6184408_GAGGGCAG_L004_17480_1     2 1.000
#> lane4_3600STDY6184409_GTTTTCAC_L004_17480_1     3 0.000
#> lane4_3600STDY6184410_GAGATGCC_L004_17480_1     3 0.000
#> lane4_3600STDY6184411_TTGAGAAG_L004_17480_1     3 0.000
#> lane4_3600STDY6184412_GCATCCGG_L004_17480_1     2 0.000
#> lane4_3600STDY6184413_GTCACCAG_L004_17480_1     2 0.249
#> lane4_3600STDY6184414_GAGGTCGC_L004_17480_1     2 0.000
#> lane4_3600STDY6184415_AAGGGGTA_L004_17480_1     2 1.000
#> lane4_3600STDY6184416_TTTTACGT_L004_17480_1     2 0.000
#> lane4_3600STDY6184417_TTCCTACA_L004_17480_1     3 0.000
#> lane4_3600STDY6184418_AGTGTAGT_L004_17480_1     2 1.000
#> lane4_3600STDY6184419_GTGGCCAA_L004_17480_1     2 1.000
#> lane4_3600STDY6184420_AAATACTC_L004_17480_1     3 0.000
#> lane4_3600STDY6184421_CACCCGTC_L004_17480_1     3 0.000
#> lane4_3600STDY6184422_TCGTGGTT_L004_17480_1     3 0.000
#> lane4_3600STDY6184423_ACTTGGGG_L004_17480_1     3 0.000
#> lane4_3600STDY6184424_GGCTGCTT_L004_17480_1     3 0.000
#> lane4_3600STDY6184425_CAGGGTCG_L004_17480_1     3 0.000
#> lane4_3600STDY6184426_CTCGTCGA_L004_17480_1     2 1.000
#> lane4_3600STDY6184427_TCTACAGT_L004_17480_1     3 0.000
#> lane4_3600STDY6184428_CTTCTAGA_L004_17480_1     3 0.000
#> lane4_3600STDY6184429_AACGGCTT_L004_17480_1     3 0.000
#> lane4_3600STDY6184430_ATAAGACT_L004_17480_1     3 0.000
#> lane4_3600STDY6184431_GTTTTTCG_L004_17480_1     3 0.000
#> lane4_3600STDY6184432_ATTGGTAT_L004_17480_1     3 0.000
#> lane4_3600STDY6184433_CGCCAGTA_L004_17480_1     2 0.000
#> lane4_3600STDY6184434_AAGCCGAA_L004_17480_1     3 0.000
#> lane4_3600STDY6184435_TGACCCAC_L004_17480_1     2 1.000
#> lane4_3600STDY6184436_ATTGCACA_L004_17480_1     3 0.000
#> lane4_3600STDY6184437_CTTTTGAT_L004_17480_1     2 0.253
#> lane4_3600STDY6184438_TAGCGAGA_L004_17480_1     2 0.000
#> lane4_3600STDY6184439_TTCGCAGG_L004_17480_1     2 0.000
#> lane4_3600STDY6184440_TAGTTATT_L004_17480_1     2 0.000
#> lane4_3600STDY6184441_TCCTCCGA_L004_17480_1     3 0.000
#> lane4_3600STDY6184442_GCGGGTCT_L004_17480_1     2 1.000
#> lane4_3600STDY6184443_GATTCTAT_L004_17480_1     3 0.000
#> lane4_3600STDY6184444_ATGCAAAG_L004_17480_1     3 0.000
#> lane4_3600STDY6184445_GTCTGAGG_L004_17480_1     2 0.000
#> lane4_3600STDY6184446_TCTGGCGA_L004_17480_1     2 0.747
#> lane4_3600STDY6184447_AATTTGCG_L004_17480_1     2 0.000
#> lane4_3600STDY6184448_TGGGTTGG_L004_17480_1     2 0.751
#> lane4_3600STDY6184449_AGTTGAAA_L004_17480_1     2 0.000
#> lane4_3600STDY6184450_GACCGGAA_L004_17480_1     2 0.000
#> lane4_3600STDY6184451_GATCGAAC_L004_17480_1     3 1.000
#> lane4_3600STDY6184452_GTATAGGG_L004_17480_1     3 0.000
#> lane4_3600STDY6184453_GGTAAGAG_L004_17480_1     3 0.000
#> lane4_3600STDY6184454_AGTCCGAT_L004_17480_1     3 0.000
#> lane4_3600STDY6184455_ATACAGGC_L004_17480_1     2 1.000
#> lane4_3600STDY6184456_TGAGACTC_L004_17480_1     2 0.000
#> lane4_3600STDY6184457_ACTCAGGA_L004_17480_1     2 1.000
#> lane4_3600STDY6184458_GTGTCTGA_L004_17480_1     3 0.000
#> lane4_3600STDY6184459_CTTGAATC_L004_17480_1     2 0.000
#> lane4_3600STDY6184460_CCGCATGA_L004_17480_1     2 0.000
#> lane4_3600STDY6184461_AAGTAACA_L004_17480_1     2 0.000
#> lane4_3600STDY6184462_GTGGTACT_L004_17480_1     2 0.000
#> lane4_3600STDY6184463_AGCTGTGC_L004_17480_1     2 0.000
#> lane4_3600STDY6184464_TTACCTTC_L004_17480_1     2 0.000
#> lane4_3600STDY6184465_TCCGGGTA_L004_17480_1     2 0.000
#> lane4_3600STDY6184466_CTACGTAA_L004_17480_1     2 0.000
#> lane4_3600STDY6184467_TCGGACCG_L004_17480_1     2 0.000
#> lane4_3600STDY6184468_ATGCGTCG_L004_17480_1     3 0.000
#> lane4_3600STDY6184469_TTCTTAGC_L004_17480_1     3 0.000
#> lane4_3600STDY6184470_TGAGTAAG_L004_17480_1     3 0.000
#> lane4_3600STDY6184471_AAGTGATA_L004_17480_1     2 0.751
#> lane4_3600STDY6184472_TCGATGCG_L004_17480_1     3 0.000
#> lane4_3600STDY6184473_TATTCTGG_L004_17480_1     2 0.502
#> lane4_3600STDY6184474_AGCCGTGA_L004_17480_1     2 0.000
#> lane4_3600STDY6184475_AAGCCTTC_L004_17480_1     2 0.751
#> lane4_3600STDY6184476_AGGTATCC_L004_17480_1     3 0.000
#> lane4_3600STDY6184477_AGGATCTC_L004_17480_1     3 0.000
#> lane4_3600STDY6184478_CTGTTTGA_L004_17480_1     3 0.000
#> lane4_3600STDY6184479_GGAATTTC_L004_17480_1     3 0.000
#> lane4_3600STDY6184480_TTGGAGCA_L004_17480_1     2 1.000
#> lane4_3600STDY6184481_AAGGTCTG_L004_17480_1     3 0.000
#> lane4_3600STDY6184482_AATTAGGC_L004_17480_1     3 0.000
#> lane4_3600STDY6184483_AATCGGGT_L004_17480_1     2 1.000
#> lane4_3600STDY6184484_AGGTAGAC_L004_17480_1     2 0.502
#> lane4_3600STDY6184485_CTTATTCC_L004_17480_1     3 0.000
#> lane4_3600STDY6184486_CAGGCTCT_L004_17480_1     2 0.000
#> lane4_3600STDY6184487_AAAGCACG_L004_17480_1     2 0.000
#> lane4_3600STDY6184488_GTATACAC_L004_17480_1     2 0.000
#> lane4_3600STDY6184489_GGACATAT_L004_17480_1     2 0.000
#> lane4_3600STDY6184490_CGGTTGGG_L004_17480_1     2 0.000
#> lane4_3600STDY6184491_GTCCGTGA_L004_17480_1     2 0.751
#> lane4_3600STDY6184492_GCCGAACC_L004_17480_1     3 0.000
#> lane4_3600STDY6184493_ACTTTACT_L004_17480_1     3 0.000
#> lane4_3600STDY6184494_GGGTCCAT_L004_17480_1     3 0.000
#> lane4_3600STDY6184495_ATAACTAG_L004_17480_1     3 0.249
#> lane4_3600STDY6184496_AATAGAGA_L004_17480_1     3 0.000
#> lane4_3600STDY6184497_TCACCATT_L004_17480_1     3 0.000
#> lane4_3600STDY6184498_CGCCTGAT_L004_17480_1     2 0.000
#> lane4_3600STDY6184499_GCGTGAAC_L004_17480_1     3 0.253
#> lane4_3600STDY6184500_TAAGGGTG_L004_17480_1     2 0.502
#> lane4_3600STDY6184501_GGTGTCGA_L004_17480_1     2 1.000
#> lane4_3600STDY6184502_CCGTTAGG_L004_17480_1     2 1.000
#> lane4_3600STDY6184503_TGGCAAAA_L004_17480_1     2 1.000
#> lane4_3600STDY6184504_CCTACCCG_L004_17480_1     2 0.000
#> lane4_3600STDY6184505_AACAGCGC_L004_17480_1     2 1.000
#> lane4_3600STDY6184506_TATACATC_L004_17480_1     3 0.000
#> lane4_3600STDY6184507_AAGCGACT_L004_17480_1     2 0.000
#> lane4_3600STDY6184508_GAAGCGCA_L004_17480_1     2 0.000
#> lane4_3600STDY6184509_ACCTCTAC_L004_17480_1     2 0.000
#> lane4_3600STDY6184510_GATTGCGT_L004_17480_1     2 0.000
#> lane4_3600STDY6184511_GCTGGTTG_L004_17480_1     2 0.000
#> lane4_3600STDY6184512_ATCGTCCT_L004_17480_1     2 0.253
#> lane4_3600STDY6184513_GGACACGG_L004_17480_1     3 1.000
#> lane4_3600STDY6184514_CGCACCTA_L004_17480_1     2 0.000
#> lane4_3600STDY6184515_CTTCGGCT_L004_17480_1     2 0.000
#> lane4_3600STDY6184516_CGAATCGA_L004_17480_1     3 0.000
#> lane4_3600STDY6184517_TAACAACT_L004_17480_1     3 0.000
#> lane4_3600STDY6184518_AGCTCTTT_L004_17480_1     3 0.000
#> lane4_3600STDY6184519_TAATCCCT_L004_17480_1     3 0.000
#> lane4_3600STDY6184520_AGGACACT_L004_17480_1     3 0.000
#> lane4_3600STDY6184521_TTACACTA_L004_17480_1     3 0.000
#> lane4_3600STDY6184522_AAACATCA_L004_17480_1     2 1.000
#> lane4_3600STDY6184523_CCATAGCT_L004_17480_1     2 1.000
#> lane4_3600STDY6184524_GTTATGGC_L004_17480_1     2 0.249
#> lane4_3600STDY6184525_ATCCCCTA_L004_17480_1     3 0.000
#> lane4_3600STDY6184526_CATACTAC_L004_17480_1     3 0.000
#> lane4_3600STDY6184527_CAATTGTT_L004_17480_1     3 0.000
#> lane4_3600STDY6184528_AAACCCGT_L004_17480_1     3 0.000
#> lane4_3600STDY6184529_CAGATTTC_L004_17480_1     3 0.000
#> lane4_3600STDY6184530_GCGTAGGT_L004_17480_1     3 0.000
#> lane4_3600STDY6184531_GGCATTCG_L004_17480_1     3 0.000
#> lane4_3600STDY6184532_TGGGGCTT_L004_17480_1     2 1.000
#> lane4_3600STDY6184533_CTGACTAC_L004_17480_1     2 0.751
#> lane4_3600STDY6184534_AACTTTTA_L004_17480_1     2 0.502
#> lane4_3600STDY6184535_AGGGATTC_L004_17480_1     2 0.000
#> lane4_3600STDY6184536_CCGAGTAG_L004_17480_1     2 1.000
#> lane4_3600STDY6184537_GGGGACTA_L004_17480_1     3 0.000
#> lane4_3600STDY6184538_GGAGTTGA_L004_17480_1     2 0.751
#> lane4_3600STDY6184539_AGCTCATC_L004_17480_1     2 1.000
#> lane4_3600STDY6184540_TAATCAAC_L004_17480_1     3 0.000
#> lane4_3600STDY6184541_ACTGGTCG_L004_17480_1     2 1.000
#> lane4_3600STDY6184542_GACGATTG_L004_17480_1     2 0.249
#> lane4_3600STDY6184543_AGCGATGA_L004_17480_1     2 0.751
#> lane4_3600STDY6184544_GAAGAGAT_L004_17480_1     2 1.000
#> lane4_3600STDY6184545_CGTATGCA_L004_17480_1     2 0.000
#> lane4_3600STDY6184546_CACGTGCG_L004_17480_1     2 1.000
#> lane4_3600STDY6184547_GCTTAAAC_L004_17480_1     3 0.000
#> lane4_3600STDY6184548_GTTCCGCA_L004_17480_1     2 0.000
#> lane4_3600STDY6184549_GTATCGTC_L004_17480_1     3 0.000
#> lane4_3600STDY6184550_GTCCTCAC_L004_17480_1     3 0.000
#> lane4_3600STDY6184551_GTACGGAC_L004_17480_1     2 0.000
#> lane4_3600STDY6184552_CATTTTGC_L004_17480_1     2 0.000
#> lane4_3600STDY6184553_TCCTCTCT_L004_17480_1     2 1.000
#> lane4_3600STDY6184554_AGCAACGA_L004_17480_1     3 0.000
#> lane4_3600STDY6184555_ACAGAAGA_L004_17480_1     2 0.747
#> lane4_3600STDY6184556_CGACCCTT_L004_17480_1     3 0.000
#> lane4_3600STDY6184557_CTGCCTAG_L004_17480_1     2 1.000
#> lane4_3600STDY6184558_GAGCGCAT_L004_17480_1     2 0.000
#> lane4_3600STDY6184559_AACTTATC_L004_17480_1     3 0.000
#> lane4_3600STDY6184560_CCGATGTA_L004_17480_1     2 0.000
#> lane4_3600STDY6184561_TTACTACC_L004_17480_1     3 0.000
#> lane4_3600STDY6184562_CAAGGAGC_L004_17480_1     2 0.000
#> lane4_3600STDY6184563_TGGTTGAC_L004_17480_1     2 0.000
#> lane4_3600STDY6184564_ACCTGCTG_L004_17480_1     2 0.000
#> lane1_3600STDY6183797_ATCACGTT_L001_17592_1     2 0.000
#> lane1_3600STDY6183798_CGATGTTT_L001_17592_1     3 0.000
#> lane1_3600STDY6183799_TTAGGCAT_L001_17592_1     3 0.000
#> lane1_3600STDY6183800_TGACCACT_L001_17592_1     3 0.000
#> lane1_3600STDY6183801_ACAGTGGT_L001_17592_1     3 0.000
#> lane1_3600STDY6183802_GCCAATGT_L001_17592_1     3 0.000
#> lane1_3600STDY6183803_CAGATCTG_L001_17592_1     3 0.000
#> lane1_3600STDY6183804_ACTTGATG_L001_17592_1     3 0.000
#> lane1_3600STDY6183805_GATCAGCG_L001_17592_1     3 0.000
#> lane1_3600STDY6183806_TAGCTTGT_L001_17592_1     3 0.000
#> lane1_3600STDY6183807_GGCTACAG_L001_17592_1     3 0.000
#> lane1_3600STDY6183808_CTTGTACT_L001_17592_1     2 0.000
#> lane1_3600STDY6183809_TGGTTGTT_L001_17592_1     3 0.000
#> lane1_3600STDY6183810_TCTCGGTT_L001_17592_1     2 0.000
#> lane1_3600STDY6183811_TAAGCGTT_L001_17592_1     3 0.000
#> lane1_3600STDY6183812_TCCGTCTT_L001_17592_1     3 0.000
#> lane1_3600STDY6183813_TGTACCTT_L001_17592_1     3 0.000
#> lane1_3600STDY6183814_TTCTGTGT_L001_17592_1     3 0.000
#> lane1_3600STDY6183815_TCTGCTGT_L001_17592_1     3 0.000
#> lane1_3600STDY6183816_TTGGAGGT_L001_17592_1     2 0.000
#> lane1_3600STDY6183817_TCGAGCGT_L001_17592_1     3 0.000
#> lane1_3600STDY6183818_TGATACGT_L001_17592_1     3 0.000
#> lane1_3600STDY6183819_TGCATAGT_L001_17592_1     3 0.000
#> lane1_3600STDY6183820_TTGACTCT_L001_17592_1     2 0.000
#> lane1_3600STDY6183821_TGCGATCT_L001_17592_1     3 0.000
#> lane1_3600STDY6183822_TTCCTGCT_L001_17592_1     3 0.000
#> lane1_3600STDY6183823_TAGTGACT_L001_17592_1     3 0.000
#> lane1_3600STDY6183824_TACAGGAT_L001_17592_1     3 0.000
#> lane1_3600STDY6183825_TCCTCAAT_L001_17592_1     3 0.000
#> lane1_3600STDY6183826_TGTGGTTG_L001_17592_1     3 0.000
#> lane1_3600STDY6183827_TAGTCTTG_L001_17592_1     3 0.000
#> lane1_3600STDY6183828_TTCCATTG_L001_17592_1     3 0.000
#> lane1_3600STDY6183829_TCGAAGTG_L001_17592_1     3 0.000
#> lane1_3600STDY6183830_TAACGCTG_L001_17592_1     3 0.000
#> lane1_3600STDY6183831_TTGGTATG_L001_17592_1     3 0.000
#> lane1_3600STDY6183832_TGAACTGG_L001_17592_1     3 0.000
#> lane1_3600STDY6183833_TACTTCGG_L001_17592_1     3 0.000
#> lane1_3600STDY6183834_TCTCACGG_L001_17592_1     3 0.000
#> lane1_3600STDY6183835_TCAGGAGG_L001_17592_1     3 0.000
#> lane1_3600STDY6183836_TAAGTTCG_L001_17592_1     3 0.000
#> lane1_3600STDY6183837_TCCAGTCG_L001_17592_1     3 0.000
#> lane1_3600STDY6183838_TGTATGCG_L001_17592_1     3 0.000
#> lane1_3600STDY6183839_TCATTGAG_L001_17592_1     2 1.000
#> lane1_3600STDY6183840_TGGCTCAG_L001_17592_1     3 0.000
#> lane1_3600STDY6183841_TATGCCAG_L001_17592_1     2 1.000
#> lane1_3600STDY6183842_TCAGATTC_L001_17592_1     3 0.000
#> lane1_3600STDY6183843_TACTAGTC_L001_17592_1     3 0.000
#> lane1_3600STDY6183844_TTCAGCTC_L001_17592_1     3 0.000
#> lane1_3600STDY6183845_TGTCTATC_L001_17592_1     3 0.000
#> lane1_3600STDY6183846_TATGTGGC_L001_17592_1     3 0.000
#> lane1_3600STDY6183847_TTACTCGC_L001_17592_1     3 0.000
#> lane1_3600STDY6183848_TCGTTAGC_L001_17592_1     3 0.000
#> lane1_3600STDY6183849_TACCGAGC_L001_17592_1     3 0.000
#> lane1_3600STDY6183850_TGTTCTCC_L001_17592_1     3 0.000
#> lane1_3600STDY6183851_TTCGCACC_L001_17592_1     3 0.000
#> lane1_3600STDY6183852_TTGCGTAC_L001_17592_1     3 0.000
#> lane1_3600STDY6183853_TCTACGAC_L001_17592_1     3 0.000
#> lane1_3600STDY6183854_TGACAGAC_L001_17592_1     3 0.000
#> lane1_3600STDY6183855_TAGAACAC_L001_17592_1     3 0.000
#> lane1_3600STDY6183856_TCATCCTA_L001_17592_1     3 0.000
#> lane1_3600STDY6183857_TGCTGATA_L001_17592_1     2 1.000
#> lane1_3600STDY6183858_TAGACGGA_L001_17592_1     3 0.000
#> lane1_3600STDY6183859_TGTGAAGA_L001_17592_1     3 0.000
#> lane1_3600STDY6183860_TCTCTTCA_L001_17592_1     3 0.000
#> lane1_3600STDY6183861_TTGTTCCA_L001_17592_1     3 0.000
#> lane1_3600STDY6183862_TGAAGCCA_L001_17592_1     3 0.000
#> lane1_3600STDY6183863_TACCACCA_L001_17592_1     3 0.000
#> lane1_3600STDY6183864_TGCGTGAA_L001_17592_1     2 0.000
#> lane1_3600STDY6183865_GGTGAGTT_L001_17592_1     2 1.000
#> lane1_3600STDY6183866_GATCTCTT_L001_17592_1     3 0.000
#> lane1_3600STDY6183867_GTGTCCTT_L001_17592_1     3 0.000
#> lane1_3600STDY6183868_GACGGATT_L001_17592_1     3 0.000
#> lane1_3600STDY6183869_GCAACATT_L001_17592_1     3 0.000
#> lane1_3600STDY6183870_GGTCGTGT_L001_17592_1     3 0.000
#> lane1_3600STDY6183871_GAATCTGT_L001_17592_1     3 0.000
#> lane1_3600STDY6183872_GTACATCT_L001_17592_1     3 0.000
#> lane1_3600STDY6183873_GAGGTGCT_L001_17592_1     3 0.000
#> lane1_3600STDY6183874_GCATGGCT_L001_17592_1     2 0.000
#> lane1_3600STDY6183875_GTTAGCCT_L001_17592_1     3 0.000
#> lane1_3600STDY6183876_GTCGCTAT_L001_17592_1     3 0.000
#> lane1_3600STDY6183877_GGAATGAT_L001_17592_1     3 0.000
#> lane1_3600STDY6183878_GAGCCAAT_L001_17592_1     3 0.000
#> lane1_3600STDY6183879_GCTCCTTG_L001_17592_1     3 0.000
#> lane1_3600STDY6183880_GTAAGGTG_L001_17592_1     3 0.000
#> lane1_3600STDY6183881_GAGGATGG_L001_17592_1     2 0.000
#> lane1_3600STDY6183882_GTTGTCGG_L001_17592_1     2 1.000
#> lane1_3600STDY6183883_GGATTAGG_L001_17592_1     3 0.000
#> lane1_3600STDY6183884_GATAGAGG_L001_17592_1     2 0.747
#> lane1_3600STDY6183885_GTGTGTCG_L001_17592_1     2 0.000
#> lane1_3600STDY6183886_GCAATCCG_L001_17592_1     2 0.000
#> lane1_3600STDY6183887_GACCTTAG_L001_17592_1     2 0.000
#> lane1_3600STDY6183888_GCCTGTTC_L001_17592_1     2 0.000
#> lane1_3600STDY6183889_GCACTGTC_L001_17592_1     2 0.000
#> lane1_3600STDY6183890_GCTAACTC_L001_17592_1     3 0.000
#> lane1_3600STDY6183891_GATTCATC_L001_17592_1     2 1.000
#> lane1_3600STDY6183892_GTCTTGGC_L001_17592_1     3 0.000
#> lane1_3600STDY6183893_GTAGAAGC_L001_17592_1     3 0.000
#> lane1_3600STDY6183894_GATGGTCC_L001_17592_1     3 0.000
#> lane1_3600STDY6183895_GTGCTACC_L001_17592_1     3 0.000
#> lane1_3600STDY6183896_GCGATTAC_L001_17592_1     3 0.000
#> lane1_3600STDY6183897_GGTTGGAC_L001_17592_1     3 0.000
#> lane1_3600STDY6183898_GGCACAAC_L001_17592_1     2 1.000
#> lane1_3600STDY6183899_GACACTTA_L001_17592_1     3 0.000
#> lane1_3600STDY6183900_GTGCAGTA_L001_17592_1     3 0.000
#> lane1_3600STDY6183901_GGAGTCTA_L001_17592_1     3 0.000
#> lane1_3600STDY6183902_GCTATGGA_L001_17592_1     3 0.000
#> lane1_3600STDY6183903_GAGTGCGA_L001_17592_1     3 0.000
#> lane1_3600STDY6183904_GTAACCGA_L001_17592_1     3 0.000
#> lane1_3600STDY6183905_GGCAAGCA_L001_17592_1     2 0.000
#> lane1_3600STDY6183906_GCCTTACA_L001_17592_1     3 0.000
#> lane1_3600STDY6183907_GAACGACA_L001_17592_1     3 0.000
#> lane1_3600STDY6183908_GCAGGTAA_L001_17592_1     2 0.747
#> lane1_3600STDY6183909_GCGTCGAA_L001_17592_1     2 0.000
#> lane1_3600STDY6183910_CGTTCGGT_L001_17592_1     2 0.000
#> lane1_3600STDY6183911_CACCAGGT_L001_17592_1     2 0.000
#> lane1_3600STDY6183912_CTGCGAGT_L001_17592_1     2 0.000
#> lane1_3600STDY6183913_CCGTATCT_L001_17592_1     2 0.000
#> lane1_3600STDY6183914_CGCTTCCT_L001_17592_1     2 0.249
#> lane1_3600STDY6183915_CAAGACCT_L001_17592_1     3 0.000
#> lane1_3600STDY6183916_CACACACT_L001_17592_1     3 0.000
#> lane1_3600STDY6183917_CCTAGTAT_L001_17592_1     3 0.000
#> lane1_3600STDY6183918_CCACCGAT_L001_17592_1     3 0.000
#> lane1_3600STDY6183919_CTTCACAT_L001_17592_1     3 0.000
#> lane1_3600STDY6183920_CTATCATG_L001_17592_1     3 0.000
#> lane1_3600STDY6183921_CATGAATG_L001_17592_1     3 0.000
#> lane1_3600STDY6183922_CCACTTGG_L001_17592_1     3 0.000
#> lane1_3600STDY6183923_CTGTACGG_L001_17592_1     3 0.000
#> lane1_3600STDY6183924_CTAGATAG_L001_17592_1     3 0.000
#> lane1_3600STDY6183925_CACTCGAG_L001_17592_1     3 0.000
#> lane1_3600STDY6183926_CCGACAAG_L001_17592_1     3 0.000
#> lane1_3600STDY6183927_CTTGCTTC_L001_17592_1     2 0.000
#> lane1_3600STDY6183928_CATAGGTC_L001_17592_1     2 1.000
#> lane1_3600STDY6183929_CACATTGC_L001_17592_1     2 1.000
#> lane1_3600STDY6183930_CGCTAAGC_L001_17592_1     3 0.000
#> lane1_3600STDY6183931_CAACCTCC_L001_17592_1     3 0.000
#> lane1_3600STDY6183932_CAGCTGAC_L001_17592_1     2 0.502
#> lane1_3600STDY6183933_CTCAAGAC_L001_17592_1     2 0.000
#> lane1_3600STDY6183934_CGTGTCAC_L001_17592_1     2 0.000
#> lane1_3600STDY6183935_CCATGCAC_L001_17592_1     3 0.000
#> lane1_3600STDY6183936_CGTTACTA_L001_17592_1     3 0.000
#> lane1_3600STDY6183937_CAAGTAGA_L001_17592_1     3 0.000
#> lane1_3600STDY6183938_CTCTCTCA_L001_17592_1     3 0.000
#> lane1_3600STDY6183939_CGACTGCA_L001_17592_1     3 0.000
#> lane1_3600STDY6183940_CCTGAGCA_L001_17592_1     3 0.000
#> lane1_3600STDY6183941_CAGGCTAA_L001_17592_1     3 0.000
#> lane1_3600STDY6183942_CGGAGGAA_L001_17592_1     3 0.000
#> lane1_3600STDY6183943_AGGAGATT_L001_17592_1     3 0.000
#> lane1_3600STDY6183944_AGGCAGCT_L001_17592_1     2 1.000
#> lane1_3600STDY6183945_ACGTTCAT_L001_17592_1     3 0.000
#> lane1_3600STDY6183946_AACGTGTG_L001_17592_1     3 0.000
#> lane1_3600STDY6183947_AGACCGTG_L001_17592_1     3 0.000
#> lane1_3600STDY6183948_ACCTCTGG_L001_17592_1     3 0.000
#> lane1_3600STDY6183949_ATCCTAGG_L001_17592_1     3 0.000
#> lane1_3600STDY6183950_ATCAACCG_L001_17592_1     3 0.000
#> lane1_3600STDY6183951_AGGTCACG_L001_17592_1     3 0.000
#> lane1_3600STDY6183952_ACTGTTAG_L001_17592_1     2 0.000
#> lane1_3600STDY6183953_AAGAGTAG_L001_17592_1     2 1.000
#> lane1_3600STDY6183954_ATTCGGAG_L001_17592_1     3 0.000
#> lane1_3600STDY6183955_ACGCAATC_L001_17592_1     3 0.000
#> lane1_3600STDY6183956_ACAAGTGC_L001_17592_1     2 0.253
#> lane1_3600STDY6183957_ATGGATCC_L001_17592_1     2 1.000
#> lane1_3600STDY6183958_AGAGGACC_L001_17592_1     2 1.000
#> lane1_3600STDY6183959_ATCTCCAC_L001_17592_1     2 0.502
#> lane1_3600STDY6183960_ATTGGCTA_L001_17592_1     2 0.498
#> lane1_3600STDY6183961_AATCCTGA_L001_17592_1     3 0.000
#> lane1_3600STDY6183962_AGGATTCA_L001_17592_1     3 0.000
#> lane1_3600STDY6183963_AACTGGCA_L001_17592_1     3 0.000
#> lane1_3600STDY6183964_ACAACGCA_L001_17592_1     2 0.000
#> lane1_3600STDY6183965_CGGAAACA_L001_17592_1     2 0.000
#> lane1_3600STDY6183966_AATGAATT_L001_17592_1     3 0.000
#> lane1_3600STDY6183967_TAGGACCC_L001_17592_1     3 0.000
#> lane1_3600STDY6183968_TCTCAGTG_L001_17592_1     3 1.000
#> lane1_3600STDY6183969_CATGGGAA_L001_17592_1     3 0.000
#> lane1_3600STDY6183970_CCTAAGAT_L001_17592_1     2 0.751
#> lane1_3600STDY6183971_CTCAGATA_L001_17592_1     3 0.000
#> lane1_3600STDY6183972_CCCATAGG_L001_17592_1     3 0.000
#> lane1_3600STDY6183973_GCTATGAC_L001_17592_1     3 0.000
#> lane1_3600STDY6183974_GCTGTGAA_L001_17592_1     3 0.000
#> lane1_3600STDY6183975_ACCTTCAA_L001_17592_1     2 1.000
#> lane1_3600STDY6183976_ACAAAGCC_L001_17592_1     2 1.000
#> lane1_3600STDY6183977_CAAAACCG_L001_17592_1     2 0.000
#> lane1_3600STDY6183978_GCTGGACA_L001_17592_1     2 1.000
#> lane1_3600STDY6183979_AAGTCGTA_L001_17592_1     2 0.000
#> lane1_3600STDY6183980_CATCCGTA_L001_17592_1     2 1.000
#> lane1_3600STDY6183981_TTGTGTCT_L001_17592_1     2 0.249
#> lane1_3600STDY6183982_TGCTCTAG_L001_17592_1     2 0.000
#> lane1_3600STDY6183983_ACCCAACA_L001_17592_1     2 0.000
#> lane1_3600STDY6183984_CGATCTGA_L001_17592_1     2 0.751
#> lane1_3600STDY6183985_GTTCCACG_L001_17592_1     2 1.000
#> lane1_3600STDY6183986_ACTCTTTC_L001_17592_1     2 0.000
#> lane1_3600STDY6183987_TATTGGAG_L001_17592_1     2 1.000
#> lane1_3600STDY6183988_TAAACATA_L001_17592_1     2 0.000
#> lane1_3600STDY6183989_GTAAGATA_L001_17592_1     2 0.000
#> lane1_3600STDY6183990_TACCGCAA_L001_17592_1     3 0.000
#> lane1_3600STDY6183991_TATCTCCT_L001_17592_1     3 0.000
#> lane1_3600STDY6183992_TGTCATCT_L001_17592_1     2 1.000
#> lane1_3600STDY6183993_ATAGCTCT_L001_17592_1     2 1.000
#> lane1_3600STDY6183994_AGTCCAAC_L001_17592_1     2 0.000
#> lane1_3600STDY6183995_TTTGGGCA_L001_17592_1     3 0.000
#> lane1_3600STDY6183996_TCTGACGC_L001_17592_1     2 0.000
#> lane1_3600STDY6183997_TGTCGACT_L001_17592_1     2 1.000
#> lane1_3600STDY6183998_GTCACGTA_L001_17592_1     2 1.000
#> lane1_3600STDY6183999_TTGAGCGA_L001_17592_1     2 1.000
#> lane1_3600STDY6184000_GAGACATA_L001_17592_1     3 0.000
#> lane1_3600STDY6184001_GTCAAGCT_L001_17592_1     2 0.000
#> lane1_3600STDY6184002_AGCAAGTT_L001_17592_1     3 0.000
#> lane1_3600STDY6184003_GACGCTCA_L001_17592_1     3 0.000
#> lane1_3600STDY6184004_ACGGCAGC_L001_17592_1     3 0.000
#> lane1_3600STDY6184005_AGAACTGA_L001_17592_1     3 0.000
#> lane1_3600STDY6184006_CGCCTTTG_L001_17592_1     3 0.000
#> lane1_3600STDY6184007_TAAGGTCA_L001_17592_1     3 0.000
#> lane1_3600STDY6184008_ACGTTGGC_L001_17592_1     3 0.000
#> lane1_3600STDY6184009_CCAGCTTA_L001_17592_1     3 0.000
#> lane1_3600STDY6184010_GAATCCTA_L001_17592_1     3 0.000
#> lane1_3600STDY6184011_ACTTCGTA_L001_17592_1     2 0.000
#> lane1_3600STDY6184012_TAGTCGGT_L001_17592_1     3 0.000
#> lane1_3600STDY6184013_CGCACGAG_L001_17592_1     3 0.000
#> lane1_3600STDY6184014_ACGTACTA_L001_17592_1     2 1.000
#> lane1_3600STDY6184015_AGCGCCAA_L001_17592_1     3 0.000
#> lane1_3600STDY6184016_GCCTGCCC_L001_17592_1     2 1.000
#> lane1_3600STDY6184017_AGGACGAT_L001_17592_1     3 0.000
#> lane1_3600STDY6184018_CTTGACCG_L001_17592_1     2 0.000
#> lane1_3600STDY6184019_AGGTCTAA_L001_17592_1     2 1.000
#> lane1_3600STDY6184020_CGAGATCC_L001_17592_1     2 1.000
#> lane1_3600STDY6184021_ATTAGCGG_L001_17592_1     3 0.000
#> lane1_3600STDY6184022_GCGCTGAT_L001_17592_1     2 0.502
#> lane1_3600STDY6184023_TGCTGAAC_L001_17592_1     2 0.000
#> lane1_3600STDY6184024_GAGGGCAG_L001_17592_1     3 0.000
#> lane1_3600STDY6184025_GTTTTCAC_L001_17592_1     3 0.000
#> lane1_3600STDY6184026_GAGATGCC_L001_17592_1     3 0.000
#> lane1_3600STDY6184027_TTGAGAAG_L001_17592_1     3 0.000
#> lane1_3600STDY6184028_GCATCCGG_L001_17592_1     3 0.000
#> lane1_3600STDY6184029_GTCACCAG_L001_17592_1     3 0.000
#> lane1_3600STDY6184030_GAGGTCGC_L001_17592_1     3 1.000
#> lane1_3600STDY6184031_AAGGGGTA_L001_17592_1     3 0.000
#> lane1_3600STDY6184032_TTTTACGT_L001_17592_1     3 0.000
#> lane1_3600STDY6184033_TTCCTACA_L001_17592_1     3 0.000
#> lane1_3600STDY6184034_AGTGTAGT_L001_17592_1     2 1.000
#> lane1_3600STDY6184035_GTGGCCAA_L001_17592_1     3 0.000
#> lane1_3600STDY6184036_AAATACTC_L001_17592_1     3 0.000
#> lane1_3600STDY6184037_CACCCGTC_L001_17592_1     3 0.000
#> lane1_3600STDY6184038_TCGTGGTT_L001_17592_1     3 0.000
#> lane1_3600STDY6184039_ACTTGGGG_L001_17592_1     2 1.000
#> lane1_3600STDY6184040_GGCTGCTT_L001_17592_1     2 0.502
#> lane1_3600STDY6184041_CAGGGTCG_L001_17592_1     3 0.000
#> lane1_3600STDY6184042_CTCGTCGA_L001_17592_1     2 1.000
#> lane1_3600STDY6184043_TCTACAGT_L001_17592_1     2 0.000
#> lane1_3600STDY6184044_CTTCTAGA_L001_17592_1     2 1.000
#> lane1_3600STDY6184045_AACGGCTT_L001_17592_1     3 0.000
#> lane1_3600STDY6184046_ATAAGACT_L001_17592_1     2 0.000
#> lane1_3600STDY6184047_GTTTTTCG_L001_17592_1     2 0.000
#> lane1_3600STDY6184048_ATTGGTAT_L001_17592_1     3 0.000
#> lane1_3600STDY6184049_CGCCAGTA_L001_17592_1     3 0.000
#> lane1_3600STDY6184050_AAGCCGAA_L001_17592_1     3 0.000
#> lane1_3600STDY6184051_TGACCCAC_L001_17592_1     2 0.751
#> lane1_3600STDY6184052_ATTGCACA_L001_17592_1     3 0.000
#> lane1_3600STDY6184053_CTTTTGAT_L001_17592_1     3 0.000
#> lane1_3600STDY6184054_TAGCGAGA_L001_17592_1     3 0.000
#> lane1_3600STDY6184055_TTCGCAGG_L001_17592_1     3 0.000
#> lane1_3600STDY6184056_TAGTTATT_L001_17592_1     3 0.000
#> lane1_3600STDY6184057_TCCTCCGA_L001_17592_1     3 0.000
#> lane1_3600STDY6184058_GCGGGTCT_L001_17592_1     2 0.253
#> lane1_3600STDY6184059_GATTCTAT_L001_17592_1     3 0.000
#> lane1_3600STDY6184060_ATGCAAAG_L001_17592_1     3 0.000
#> lane1_3600STDY6184061_GTCTGAGG_L001_17592_1     2 0.498
#> lane1_3600STDY6184062_TCTGGCGA_L001_17592_1     2 0.253
#> lane1_3600STDY6184063_AATTTGCG_L001_17592_1     2 0.000
#> lane1_3600STDY6184064_TGGGTTGG_L001_17592_1     2 0.000
#> lane1_3600STDY6184065_AGTTGAAA_L001_17592_1     2 0.000
#> lane1_3600STDY6184066_GACCGGAA_L001_17592_1     2 0.000
#> lane1_3600STDY6184067_GATCGAAC_L001_17592_1     2 0.000
#> lane1_3600STDY6184068_GTATAGGG_L001_17592_1     2 0.000
#> lane1_3600STDY6184069_GGTAAGAG_L001_17592_1     3 0.747
#> lane1_3600STDY6184070_AGTCCGAT_L001_17592_1     2 0.000
#> lane1_3600STDY6184071_ATACAGGC_L001_17592_1     2 0.000
#> lane1_3600STDY6184072_TGAGACTC_L001_17592_1     3 1.000
#> lane1_3600STDY6184073_ACTCAGGA_L001_17592_1     3 0.000
#> lane1_3600STDY6184074_GTGTCTGA_L001_17592_1     3 0.000
#> lane1_3600STDY6184075_CTTGAATC_L001_17592_1     3 0.000
#> lane1_3600STDY6184076_CCGCATGA_L001_17592_1     3 0.000
#> lane1_3600STDY6184077_AAGTAACA_L001_17592_1     3 0.000
#> lane1_3600STDY6184078_GTGGTACT_L001_17592_1     2 0.000
#> lane1_3600STDY6184079_AGCTGTGC_L001_17592_1     2 0.000
#> lane1_3600STDY6184080_TTACCTTC_L001_17592_1     3 0.000
#> lane1_3600STDY6184081_TCCGGGTA_L001_17592_1     2 1.000
#> lane1_3600STDY6184082_CTACGTAA_L001_17592_1     2 0.000
#> lane1_3600STDY6184083_TCGGACCG_L001_17592_1     3 0.000
#> lane1_3600STDY6184084_ATGCGTCG_L001_17592_1     3 0.000
#> lane1_3600STDY6184085_TTCTTAGC_L001_17592_1     2 1.000
#> lane1_3600STDY6184086_TGAGTAAG_L001_17592_1     2 1.000
#> lane1_3600STDY6184087_AAGTGATA_L001_17592_1     2 0.498
#> lane1_3600STDY6184088_TCGATGCG_L001_17592_1     2 1.000
#> lane1_3600STDY6184089_TATTCTGG_L001_17592_1     2 0.000
#> lane1_3600STDY6184090_AGCCGTGA_L001_17592_1     2 0.000
#> lane1_3600STDY6184091_AAGCCTTC_L001_17592_1     2 1.000
#> lane1_3600STDY6184092_AGGTATCC_L001_17592_1     2 0.249
#> lane1_3600STDY6184093_AGGATCTC_L001_17592_1     3 0.000
#> lane1_3600STDY6184094_CTGTTTGA_L001_17592_1     2 0.000
#> lane1_3600STDY6184095_GGAATTTC_L001_17592_1     2 0.000
#> lane1_3600STDY6184096_TTGGAGCA_L001_17592_1     3 0.000
#> lane1_3600STDY6184097_AAGGTCTG_L001_17592_1     3 0.000
#> lane1_3600STDY6184098_AATTAGGC_L001_17592_1     3 0.000
#> lane1_3600STDY6184099_AATCGGGT_L001_17592_1     3 0.000
#> lane1_3600STDY6184100_AGGTAGAC_L001_17592_1     3 0.000
#> lane1_3600STDY6184101_CTTATTCC_L001_17592_1     3 0.000
#> lane1_3600STDY6184102_CAGGCTCT_L001_17592_1     2 0.000
#> lane1_3600STDY6184103_AAAGCACG_L001_17592_1     2 0.498
#> lane1_3600STDY6184104_GTATACAC_L001_17592_1     2 1.000
#> lane1_3600STDY6184105_GGACATAT_L001_17592_1     2 0.000
#> lane1_3600STDY6184106_CGGTTGGG_L001_17592_1     2 1.000
#> lane1_3600STDY6184107_GTCCGTGA_L001_17592_1     3 0.000
#> lane1_3600STDY6184108_GCCGAACC_L001_17592_1     3 0.000
#> lane1_3600STDY6184109_ACTTTACT_L001_17592_1     3 0.000
#> lane1_3600STDY6184110_GGGTCCAT_L001_17592_1     3 0.000
#> lane1_3600STDY6184111_ATAACTAG_L001_17592_1     2 1.000
#> lane1_3600STDY6184112_AATAGAGA_L001_17592_1     2 0.000
#> lane1_3600STDY6184113_TCACCATT_L001_17592_1     2 0.747
#> lane1_3600STDY6184114_CGCCTGAT_L001_17592_1     2 0.000
#> lane1_3600STDY6184115_GCGTGAAC_L001_17592_1     2 0.000
#> lane1_3600STDY6184116_TAAGGGTG_L001_17592_1     2 0.498
#> lane1_3600STDY6184117_GGTGTCGA_L001_17592_1     3 0.000
#> lane1_3600STDY6184118_CCGTTAGG_L001_17592_1     3 0.000
#> lane1_3600STDY6184119_TGGCAAAA_L001_17592_1     2 1.000
#> lane1_3600STDY6184120_CCTACCCG_L001_17592_1     3 0.000
#> lane1_3600STDY6184121_AACAGCGC_L001_17592_1     3 0.000
#> lane1_3600STDY6184122_TATACATC_L001_17592_1     3 0.000
#> lane1_3600STDY6184123_AAGCGACT_L001_17592_1     3 1.000
#> lane1_3600STDY6184124_GAAGCGCA_L001_17592_1     3 0.000
#> lane1_3600STDY6184125_ACCTCTAC_L001_17592_1     3 0.000
#> lane1_3600STDY6184126_GATTGCGT_L001_17592_1     2 0.000
#> lane1_3600STDY6184127_GCTGGTTG_L001_17592_1     3 0.000
#> lane1_3600STDY6184128_ATCGTCCT_L001_17592_1     3 0.000
#> lane1_3600STDY6184129_GGACACGG_L001_17592_1     3 0.000
#> lane1_3600STDY6184130_CGCACCTA_L001_17592_1     2 1.000
#> lane1_3600STDY6184131_CTTCGGCT_L001_17592_1     3 0.000
#> lane1_3600STDY6184132_CGAATCGA_L001_17592_1     2 0.000
#> lane1_3600STDY6184133_TAACAACT_L001_17592_1     3 0.000
#> lane1_3600STDY6184134_AGCTCTTT_L001_17592_1     2 1.000
#> lane1_3600STDY6184135_TAATCCCT_L001_17592_1     2 1.000
#> lane1_3600STDY6184136_AGGACACT_L001_17592_1     2 0.000
#> lane1_3600STDY6184137_TTACACTA_L001_17592_1     3 0.000
#> lane1_3600STDY6184138_AAACATCA_L001_17592_1     2 0.000
#> lane1_3600STDY6184139_CCATAGCT_L001_17592_1     3 0.000
#> lane1_3600STDY6184140_GTTATGGC_L001_17592_1     2 0.249
#> lane1_3600STDY6184141_ATCCCCTA_L001_17592_1     2 0.000
#> lane1_3600STDY6184142_CATACTAC_L001_17592_1     3 0.000
#> lane1_3600STDY6184143_CAATTGTT_L001_17592_1     2 1.000
#> lane1_3600STDY6184144_AAACCCGT_L001_17592_1     2 1.000
#> lane1_3600STDY6184145_CAGATTTC_L001_17592_1     3 0.000
#> lane1_3600STDY6184146_GCGTAGGT_L001_17592_1     3 0.000
#> lane1_3600STDY6184147_GGCATTCG_L001_17592_1     3 0.000
#> lane1_3600STDY6184148_TGGGGCTT_L001_17592_1     3 0.000
#> lane1_3600STDY6184149_CTGACTAC_L001_17592_1     3 0.000
#> lane1_3600STDY6184150_AACTTTTA_L001_17592_1     3 0.000
#> lane1_3600STDY6184151_AGGGATTC_L001_17592_1     2 1.000
#> lane1_3600STDY6184152_CCGAGTAG_L001_17592_1     3 0.000
#> lane1_3600STDY6184153_GGGGACTA_L001_17592_1     3 0.000
#> lane1_3600STDY6184154_GGAGTTGA_L001_17592_1     2 1.000
#> lane1_3600STDY6184155_AGCTCATC_L001_17592_1     3 0.000
#> lane1_3600STDY6184156_TAATCAAC_L001_17592_1     2 0.000
#> lane1_3600STDY6184157_ACTGGTCG_L001_17592_1     3 0.000
#> lane1_3600STDY6184158_GACGATTG_L001_17592_1     2 1.000
#> lane1_3600STDY6184159_AGCGATGA_L001_17592_1     3 0.000
#> lane1_3600STDY6184160_GAAGAGAT_L001_17592_1     2 1.000
#> lane1_3600STDY6184161_CGTATGCA_L001_17592_1     3 0.000
#> lane1_3600STDY6184162_CACGTGCG_L001_17592_1     3 0.000
#> lane1_3600STDY6184163_GCTTAAAC_L001_17592_1     2 1.000
#> lane1_3600STDY6184164_GTTCCGCA_L001_17592_1     2 1.000
#> lane1_3600STDY6184165_GTATCGTC_L001_17592_1     3 0.498
#> lane1_3600STDY6184166_GTCCTCAC_L001_17592_1     3 0.000
#> lane1_3600STDY6184167_GTACGGAC_L001_17592_1     2 0.747
#> lane1_3600STDY6184168_CATTTTGC_L001_17592_1     3 0.000
#> lane1_3600STDY6184169_TCCTCTCT_L001_17592_1     3 0.000
#> lane1_3600STDY6184170_AGCAACGA_L001_17592_1     2 1.000
#> lane1_3600STDY6184171_ACAGAAGA_L001_17592_1     3 0.000
#> lane1_3600STDY6184172_CGACCCTT_L001_17592_1     3 0.000
#> lane1_3600STDY6184173_CTGCCTAG_L001_17592_1     3 0.000
#> lane1_3600STDY6184174_GAGCGCAT_L001_17592_1     3 0.000
#> lane1_3600STDY6184175_AACTTATC_L001_17592_1     3 0.000
#> lane1_3600STDY6184176_CCGATGTA_L001_17592_1     3 0.000
#> lane1_3600STDY6184177_TTACTACC_L001_17592_1     3 0.000
#> lane1_3600STDY6184178_CAAGGAGC_L001_17592_1     3 0.000
#> lane1_3600STDY6184179_TGGTTGAC_L001_17592_1     3 0.000
#> lane1_3600STDY6184180_ACCTGCTG_L001_17592_1     2 0.000

show/hide code output

get_classes(res, k = 4)
#>                                             class     p
#> lane1_3600STDY6077864_ATCACGTT_L001_15986_1     2 0.000
#> lane1_3600STDY6077865_CGATGTTT_L001_15986_1     2 0.000
#> lane1_3600STDY6077866_TTAGGCAT_L001_15986_1     1 0.000
#> lane1_3600STDY6077867_TGACCACT_L001_15986_1     1 0.000
#> lane1_3600STDY6077868_ACAGTGGT_L001_15986_1     1 0.000
#> lane1_3600STDY6077869_GCCAATGT_L001_15986_1     1 0.000
#> lane1_3600STDY6077870_CAGATCTG_L001_15986_1     1 0.000
#> lane1_3600STDY6077871_ACTTGATG_L001_15986_1     1 0.000
#> lane1_3600STDY6077872_GATCAGCG_L001_15986_1     1 0.000
#> lane1_3600STDY6077873_TAGCTTGT_L001_15986_1     1 0.000
#> lane1_3600STDY6077874_GGCTACAG_L001_15986_1     1 0.000
#> lane1_3600STDY6077875_CTTGTACT_L001_15986_1     1 1.000
#> lane1_3600STDY6077876_TGGTTGTT_L001_15986_1     1 0.000
#> lane1_3600STDY6077877_TCTCGGTT_L001_15986_1     1 0.000
#> lane1_3600STDY6077878_TAAGCGTT_L001_15986_1     1 0.000
#> lane1_3600STDY6077879_TCCGTCTT_L001_15986_1     1 0.249
#> lane1_3600STDY6077880_TGTACCTT_L001_15986_1     1 0.000
#> lane1_3600STDY6077881_TTCTGTGT_L001_15986_1     1 0.000
#> lane1_3600STDY6077882_TCTGCTGT_L001_15986_1     1 0.000
#> lane1_3600STDY6077883_TTGGAGGT_L001_15986_1     2 0.000
#> lane1_3600STDY6077884_TCGAGCGT_L001_15986_1     1 1.000
#> lane1_3600STDY6077885_TGATACGT_L001_15986_1     1 1.000
#> lane1_3600STDY6077886_TGCATAGT_L001_15986_1     1 1.000
#> lane1_3600STDY6077887_TTGACTCT_L001_15986_1     1 1.000
#> lane1_3600STDY6077888_TGCGATCT_L001_15986_1     1 0.000
#> lane1_3600STDY6077889_TTCCTGCT_L001_15986_1     1 0.000
#> lane1_3600STDY6077890_TAGTGACT_L001_15986_1     1 0.000
#> lane1_3600STDY6077891_TACAGGAT_L001_15986_1     1 0.000
#> lane1_3600STDY6077892_TCCTCAAT_L001_15986_1     1 0.000
#> lane1_3600STDY6077893_TGTGGTTG_L001_15986_1     1 0.000
#> lane1_3600STDY6077894_TAGTCTTG_L001_15986_1     1 0.000
#> lane1_3600STDY6077895_TTCCATTG_L001_15986_1     1 0.000
#> lane1_3600STDY6077896_TCGAAGTG_L001_15986_1     1 0.000
#> lane1_3600STDY6077897_TAACGCTG_L001_15986_1     1 0.498
#> lane1_3600STDY6077898_TTGGTATG_L001_15986_1     1 0.249
#> lane1_3600STDY6077899_TGAACTGG_L001_15986_1     2 0.000
#> lane1_3600STDY6077900_TACTTCGG_L001_15986_1     1 0.000
#> lane1_3600STDY6077901_TCTCACGG_L001_15986_1     1 0.000
#> lane1_3600STDY6077902_TCAGGAGG_L001_15986_1     1 0.000
#> lane1_3600STDY6077903_TAAGTTCG_L001_15986_1     1 0.000
#> lane1_3600STDY6077904_TCCAGTCG_L001_15986_1     2 0.000
#> lane1_3600STDY6077905_TGTATGCG_L001_15986_1     1 0.000
#> lane1_3600STDY6077906_TCATTGAG_L001_15986_1     1 0.000
#> lane1_3600STDY6077907_TGGCTCAG_L001_15986_1     1 0.000
#> lane1_3600STDY6077908_TATGCCAG_L001_15986_1     1 0.000
#> lane1_3600STDY6077909_TCAGATTC_L001_15986_1     1 0.000
#> lane1_3600STDY6077910_TACTAGTC_L001_15986_1     1 0.000
#> lane1_3600STDY6077911_TTCAGCTC_L001_15986_1     2 0.000
#> lane1_3600STDY6077912_TGTCTATC_L001_15986_1     1 0.498
#> lane1_3600STDY6077913_TATGTGGC_L001_15986_1     1 0.000
#> lane1_3600STDY6077914_TTACTCGC_L001_15986_1     2 0.000
#> lane1_3600STDY6077915_TCGTTAGC_L001_15986_1     1 0.000
#> lane1_3600STDY6077916_TACCGAGC_L001_15986_1     1 0.000
#> lane1_3600STDY6077917_TGTTCTCC_L001_15986_1     1 0.000
#> lane1_3600STDY6077918_TTCGCACC_L001_15986_1     1 0.000
#> lane1_3600STDY6077919_TTGCGTAC_L001_15986_1     1 0.000
#> lane1_3600STDY6077920_TCTACGAC_L001_15986_1     1 0.000
#> lane1_3600STDY6077921_TGACAGAC_L001_15986_1     1 0.000
#> lane1_3600STDY6077922_TAGAACAC_L001_15986_1     1 0.000
#> lane1_3600STDY6077923_TCATCCTA_L001_15986_1     1 0.000
#> lane1_3600STDY6077924_TGCTGATA_L001_15986_1     1 0.000
#> lane1_3600STDY6077925_TAGACGGA_L001_15986_1     1 0.751
#> lane1_3600STDY6077926_TGTGAAGA_L001_15986_1     1 0.000
#> lane1_3600STDY6077927_TCTCTTCA_L001_15986_1     1 0.000
#> lane1_3600STDY6077928_TTGTTCCA_L001_15986_1     1 0.000
#> lane1_3600STDY6077929_TGAAGCCA_L001_15986_1     1 0.000
#> lane1_3600STDY6077930_TACCACCA_L001_15986_1     1 0.000
#> lane1_3600STDY6077931_TGCGTGAA_L001_15986_1     1 0.000
#> lane1_3600STDY6077932_GGTGAGTT_L001_15986_1     1 0.000
#> lane1_3600STDY6077933_GATCTCTT_L001_15986_1     2 0.000
#> lane1_3600STDY6077934_GTGTCCTT_L001_15986_1     2 0.000
#> lane1_3600STDY6077935_GACGGATT_L001_15986_1     1 0.000
#> lane1_3600STDY6077936_GCAACATT_L001_15986_1     1 0.000
#> lane1_3600STDY6077937_GGTCGTGT_L001_15986_1     1 1.000
#> lane1_3600STDY6077938_GAATCTGT_L001_15986_1     1 0.000
#> lane1_3600STDY6077939_GTACATCT_L001_15986_1     1 0.000
#> lane1_3600STDY6077940_GAGGTGCT_L001_15986_1     1 0.000
#> lane1_3600STDY6077941_GCATGGCT_L001_15986_1     1 0.000
#> lane1_3600STDY6077942_GTTAGCCT_L001_15986_1     1 0.000
#> lane1_3600STDY6077943_GTCGCTAT_L001_15986_1     1 0.000
#> lane1_3600STDY6077944_GGAATGAT_L001_15986_1     1 0.000
#> lane1_3600STDY6077945_GAGCCAAT_L001_15986_1     1 0.000
#> lane1_3600STDY6077946_GCTCCTTG_L001_15986_1     1 0.000
#> lane1_3600STDY6077947_GTAAGGTG_L001_15986_1     1 0.000
#> lane1_3600STDY6077948_GAGGATGG_L001_15986_1     1 0.000
#> lane1_3600STDY6077949_GTTGTCGG_L001_15986_1     1 0.000
#> lane1_3600STDY6077950_GGATTAGG_L001_15986_1     1 0.000
#> lane1_3600STDY6077951_GATAGAGG_L001_15986_1     1 0.000
#> lane1_3600STDY6077952_GTGTGTCG_L001_15986_1     1 0.000
#> lane1_3600STDY6077953_GCAATCCG_L001_15986_1     1 0.000
#> lane1_3600STDY6077954_GACCTTAG_L001_15986_1     1 0.000
#> lane1_3600STDY6077955_GCCTGTTC_L001_15986_1     1 0.000
#> lane1_3600STDY6077956_GCACTGTC_L001_15986_1     1 0.000
#> lane1_3600STDY6077957_GCTAACTC_L001_15986_1     1 0.249
#> lane1_3600STDY6077958_GATTCATC_L001_15986_1     1 0.000
#> lane1_3600STDY6077959_GTCTTGGC_L001_15986_1     1 0.000
#> lane3_3600STDY6077960_ATCACGTT_L003_15987_1     2 0.000
#> lane3_3600STDY6077961_CGATGTTT_L003_15987_1     2 0.000
#> lane3_3600STDY6077962_TTAGGCAT_L003_15987_1     1 0.000
#> lane3_3600STDY6077963_TGACCACT_L003_15987_1     1 0.000
#> lane3_3600STDY6077964_ACAGTGGT_L003_15987_1     1 0.000
#> lane3_3600STDY6077965_GCCAATGT_L003_15987_1     1 0.000
#> lane3_3600STDY6077966_CAGATCTG_L003_15987_1     1 0.000
#> lane3_3600STDY6077967_ACTTGATG_L003_15987_1     1 0.000
#> lane3_3600STDY6077968_GATCAGCG_L003_15987_1     1 0.000
#> lane3_3600STDY6077969_TAGCTTGT_L003_15987_1     1 0.000
#> lane3_3600STDY6077970_GGCTACAG_L003_15987_1     1 0.000
#> lane3_3600STDY6077971_CTTGTACT_L003_15987_1     1 0.000
#> lane3_3600STDY6077972_TGGTTGTT_L003_15987_1     1 0.000
#> lane3_3600STDY6077973_TCTCGGTT_L003_15987_1     1 0.000
#> lane3_3600STDY6077974_TAAGCGTT_L003_15987_1     1 0.000
#> lane3_3600STDY6077975_TCCGTCTT_L003_15987_1     1 0.000
#> lane3_3600STDY6077976_TGTACCTT_L003_15987_1     1 0.000
#> lane3_3600STDY6077977_TTCTGTGT_L003_15987_1     1 0.000
#> lane3_3600STDY6077978_TCTGCTGT_L003_15987_1     2 0.000
#> lane3_3600STDY6077979_TTGGAGGT_L003_15987_1     1 0.000
#> lane3_3600STDY6077980_TCGAGCGT_L003_15987_1     1 0.000
#> lane3_3600STDY6077981_TGATACGT_L003_15987_1     1 0.000
#> lane3_3600STDY6077982_TGCATAGT_L003_15987_1     1 0.000
#> lane3_3600STDY6077983_TTGACTCT_L003_15987_1     1 0.000
#> lane3_3600STDY6077984_TGCGATCT_L003_15987_1     1 0.000
#> lane3_3600STDY6077985_TTCCTGCT_L003_15987_1     1 0.000
#> lane3_3600STDY6077986_TAGTGACT_L003_15987_1     1 0.000
#> lane3_3600STDY6077987_TACAGGAT_L003_15987_1     1 0.000
#> lane3_3600STDY6077988_TCCTCAAT_L003_15987_1     1 0.000
#> lane3_3600STDY6077989_TGTGGTTG_L003_15987_1     1 0.000
#> lane3_3600STDY6077990_TAGTCTTG_L003_15987_1     1 0.000
#> lane3_3600STDY6077991_TTCCATTG_L003_15987_1     1 0.000
#> lane3_3600STDY6077992_TCGAAGTG_L003_15987_1     1 0.000
#> lane3_3600STDY6077993_TAACGCTG_L003_15987_1     1 0.000
#> lane3_3600STDY6077994_TTGGTATG_L003_15987_1     1 0.000
#> lane3_3600STDY6077995_TGAACTGG_L003_15987_1     1 0.000
#> lane3_3600STDY6077996_TACTTCGG_L003_15987_1     1 0.000
#> lane3_3600STDY6077997_TCTCACGG_L003_15987_1     2 0.000
#> lane3_3600STDY6077998_TCAGGAGG_L003_15987_1     1 0.000
#> lane3_3600STDY6077999_TAAGTTCG_L003_15987_1     1 0.000
#> lane3_3600STDY6078000_TCCAGTCG_L003_15987_1     1 0.000
#> lane3_3600STDY6078001_TGTATGCG_L003_15987_1     2 0.000
#> lane3_3600STDY6078002_TCATTGAG_L003_15987_1     3 0.000
#> lane3_3600STDY6078003_TGGCTCAG_L003_15987_1     1 0.000
#> lane3_3600STDY6078004_TATGCCAG_L003_15987_1     1 0.000
#> lane3_3600STDY6078005_TCAGATTC_L003_15987_1     1 0.000
#> lane3_3600STDY6078006_TACTAGTC_L003_15987_1     1 0.000
#> lane3_3600STDY6078007_TTCAGCTC_L003_15987_1     1 0.000
#> lane3_3600STDY6078008_TGTCTATC_L003_15987_1     1 0.000
#> lane3_3600STDY6078009_TATGTGGC_L003_15987_1     1 0.000
#> lane3_3600STDY6078010_TTACTCGC_L003_15987_1     1 0.000
#> lane3_3600STDY6078011_TCGTTAGC_L003_15987_1     1 0.000
#> lane3_3600STDY6078012_TACCGAGC_L003_15987_1     1 0.000
#> lane3_3600STDY6078013_TGTTCTCC_L003_15987_1     1 0.000
#> lane3_3600STDY6078014_TTCGCACC_L003_15987_1     1 0.000
#> lane3_3600STDY6078015_TTGCGTAC_L003_15987_1     1 0.000
#> lane3_3600STDY6078016_TCTACGAC_L003_15987_1     1 0.000
#> lane3_3600STDY6078017_TGACAGAC_L003_15987_1     1 0.000
#> lane3_3600STDY6078018_TAGAACAC_L003_15987_1     1 0.000
#> lane3_3600STDY6078019_TCATCCTA_L003_15987_1     1 0.000
#> lane3_3600STDY6078020_TGCTGATA_L003_15987_1     1 0.000
#> lane3_3600STDY6078021_TAGACGGA_L003_15987_1     1 0.000
#> lane3_3600STDY6078022_TGTGAAGA_L003_15987_1     1 0.000
#> lane3_3600STDY6078023_TCTCTTCA_L003_15987_1     1 0.000
#> lane3_3600STDY6078024_TTGTTCCA_L003_15987_1     1 0.000
#> lane3_3600STDY6078025_TGAAGCCA_L003_15987_1     1 0.000
#> lane3_3600STDY6078026_TACCACCA_L003_15987_1     1 0.000
#> lane3_3600STDY6078027_TGCGTGAA_L003_15987_1     2 0.000
#> lane3_3600STDY6078028_GGTGAGTT_L003_15987_1     1 0.000
#> lane3_3600STDY6078029_GATCTCTT_L003_15987_1     1 0.000
#> lane3_3600STDY6078030_GTGTCCTT_L003_15987_1     1 0.000
#> lane3_3600STDY6078031_GACGGATT_L003_15987_1     1 0.000
#> lane3_3600STDY6078032_GCAACATT_L003_15987_1     1 0.000
#> lane3_3600STDY6078033_GGTCGTGT_L003_15987_1     1 0.000
#> lane3_3600STDY6078034_GAATCTGT_L003_15987_1     1 0.000
#> lane3_3600STDY6078035_GTACATCT_L003_15987_1     1 0.000
#> lane3_3600STDY6078036_GAGGTGCT_L003_15987_1     1 0.000
#> lane3_3600STDY6078037_GCATGGCT_L003_15987_1     1 0.000
#> lane3_3600STDY6078038_GTTAGCCT_L003_15987_1     1 0.000
#> lane3_3600STDY6078039_GTCGCTAT_L003_15987_1     1 0.000
#> lane3_3600STDY6078040_GGAATGAT_L003_15987_1     1 0.000
#> lane3_3600STDY6078041_GAGCCAAT_L003_15987_1     1 0.000
#> lane3_3600STDY6078042_GCTCCTTG_L003_15987_1     1 0.000
#> lane3_3600STDY6078043_GTAAGGTG_L003_15987_1     1 0.000
#> lane3_3600STDY6078044_GAGGATGG_L003_15987_1     1 0.000
#> lane3_3600STDY6078045_GTTGTCGG_L003_15987_1     1 0.000
#> lane3_3600STDY6078046_GGATTAGG_L003_15987_1     1 0.000
#> lane3_3600STDY6078047_GATAGAGG_L003_15987_1     1 0.000
#> lane3_3600STDY6078048_GTGTGTCG_L003_15987_1     1 0.000
#> lane3_3600STDY6078049_GCAATCCG_L003_15987_1     1 0.000
#> lane3_3600STDY6078050_GACCTTAG_L003_15987_1     1 0.000
#> lane3_3600STDY6078051_GCCTGTTC_L003_15987_1     1 0.000
#> lane3_3600STDY6078052_GCACTGTC_L003_15987_1     1 0.000
#> lane3_3600STDY6078053_GCTAACTC_L003_15987_1     1 0.000
#> lane3_3600STDY6078054_GATTCATC_L003_15987_1     1 0.000
#> lane3_3600STDY6078055_GTCTTGGC_L003_15987_1     1 0.000
#> lane1_3600STDY6167693_ATCACGTT_L001_17236_1     1 1.000
#> lane1_3600STDY6167694_CGATGTTT_L001_17236_1     4 0.000
#> lane1_3600STDY6167695_TTAGGCAT_L001_17236_1     4 0.000
#> lane1_3600STDY6167696_TGACCACT_L001_17236_1     4 0.000
#> lane1_3600STDY6167697_ACAGTGGT_L001_17236_1     2 0.000
#> lane1_3600STDY6167698_GCCAATGT_L001_17236_1     4 0.000
#> lane1_3600STDY6167699_CAGATCTG_L001_17236_1     4 0.000
#> lane1_3600STDY6167700_ACTTGATG_L001_17236_1     2 0.000
#> lane1_3600STDY6167701_GATCAGCG_L001_17236_1     4 0.000
#> lane1_3600STDY6167702_TAGCTTGT_L001_17236_1     1 1.000
#> lane1_3600STDY6167703_GGCTACAG_L001_17236_1     1 1.000
#> lane1_3600STDY6167704_CTTGTACT_L001_17236_1     3 1.000
#> lane1_3600STDY6167705_TGGTTGTT_L001_17236_1     1 1.000
#> lane1_3600STDY6167706_TCTCGGTT_L001_17236_1     2 0.000
#> lane1_3600STDY6167707_TAAGCGTT_L001_17236_1     2 0.000
#> lane1_3600STDY6167708_TCCGTCTT_L001_17236_1     1 1.000
#> lane1_3600STDY6167709_TGTACCTT_L001_17236_1     4 0.000
#> lane1_3600STDY6167710_TTCTGTGT_L001_17236_1     2 0.000
#> lane1_3600STDY6167711_TCTGCTGT_L001_17236_1     4 0.000
#> lane1_3600STDY6167712_TTGGAGGT_L001_17236_1     4 1.000
#> lane1_3600STDY6167713_TCGAGCGT_L001_17236_1     1 1.000
#> lane1_3600STDY6167714_TGATACGT_L001_17236_1     4 0.000
#> lane1_3600STDY6167715_TGCATAGT_L001_17236_1     4 0.000
#> lane1_3600STDY6167716_TTGACTCT_L001_17236_1     4 0.000
#> lane1_3600STDY6167717_TGCGATCT_L001_17236_1     4 0.000
#> lane1_3600STDY6167718_TTCCTGCT_L001_17236_1     2 0.000
#> lane1_3600STDY6167719_TAGTGACT_L001_17236_1     4 0.000
#> lane1_3600STDY6167720_TACAGGAT_L001_17236_1     4 0.000
#> lane1_3600STDY6167721_TCCTCAAT_L001_17236_1     4 0.000
#> lane1_3600STDY6167722_TGTGGTTG_L001_17236_1     4 0.000
#> lane1_3600STDY6167723_TAGTCTTG_L001_17236_1     4 0.000
#> lane1_3600STDY6167724_TTCCATTG_L001_17236_1     2 0.000
#> lane1_3600STDY6167725_TCGAAGTG_L001_17236_1     4 0.000
#> lane1_3600STDY6167726_TAACGCTG_L001_17236_1     4 1.000
#> lane1_3600STDY6167727_TTGGTATG_L001_17236_1     4 0.000
#> lane1_3600STDY6167728_TGAACTGG_L001_17236_1     1 1.000
#> lane1_3600STDY6167729_TACTTCGG_L001_17236_1     4 1.000
#> lane1_3600STDY6167730_TCTCACGG_L001_17236_1     1 1.000
#> lane1_3600STDY6167731_TCAGGAGG_L001_17236_1     4 0.000
#> lane1_3600STDY6167732_TAAGTTCG_L001_17236_1     4 0.000
#> lane1_3600STDY6167733_TCCAGTCG_L001_17236_1     4 0.000
#> lane1_3600STDY6167734_TGTATGCG_L001_17236_1     2 0.000
#> lane1_3600STDY6167735_TCATTGAG_L001_17236_1     4 1.000
#> lane1_3600STDY6167736_TGGCTCAG_L001_17236_1     4 0.000
#> lane1_3600STDY6167737_TATGCCAG_L001_17236_1     4 0.000
#> lane1_3600STDY6167738_TCAGATTC_L001_17236_1     4 0.000
#> lane1_3600STDY6167739_TACTAGTC_L001_17236_1     4 0.000
#> lane1_3600STDY6167740_TTCAGCTC_L001_17236_1     4 0.000
#> lane1_3600STDY6167741_TGTCTATC_L001_17236_1     4 0.000
#> lane1_3600STDY6167742_TATGTGGC_L001_17236_1     4 0.000
#> lane1_3600STDY6167743_TTACTCGC_L001_17236_1     4 0.000
#> lane1_3600STDY6167744_TCGTTAGC_L001_17236_1     4 0.000
#> lane1_3600STDY6167745_TACCGAGC_L001_17236_1     4 0.000
#> lane1_3600STDY6167746_TGTTCTCC_L001_17236_1     1 1.000
#> lane1_3600STDY6167747_TTCGCACC_L001_17236_1     4 0.249
#> lane1_3600STDY6167748_TTGCGTAC_L001_17236_1     1 1.000
#> lane1_3600STDY6167749_TCTACGAC_L001_17236_1     4 1.000
#> lane1_3600STDY6167750_TGACAGAC_L001_17236_1     4 0.000
#> lane1_3600STDY6167751_TAGAACAC_L001_17236_1     1 1.000
#> lane1_3600STDY6167752_TCATCCTA_L001_17236_1     4 0.000
#> lane1_3600STDY6167753_TGCTGATA_L001_17236_1     1 1.000
#> lane1_3600STDY6167754_TAGACGGA_L001_17236_1     4 0.000
#> lane1_3600STDY6167755_TGTGAAGA_L001_17236_1     4 1.000
#> lane1_3600STDY6167756_TCTCTTCA_L001_17236_1     4 0.000
#> lane1_3600STDY6167757_TTGTTCCA_L001_17236_1     1 1.000
#> lane1_3600STDY6167758_TGAAGCCA_L001_17236_1     2 0.000
#> lane1_3600STDY6167759_TACCACCA_L001_17236_1     4 0.000
#> lane1_3600STDY6167760_TGCGTGAA_L001_17236_1     4 0.000
#> lane1_3600STDY6167761_GGTGAGTT_L001_17236_1     4 0.000
#> lane1_3600STDY6167762_GATCTCTT_L001_17236_1     4 0.000
#> lane1_3600STDY6167763_GTGTCCTT_L001_17236_1     4 0.000
#> lane1_3600STDY6167764_GACGGATT_L001_17236_1     4 0.000
#> lane1_3600STDY6167765_GCAACATT_L001_17236_1     4 0.000
#> lane1_3600STDY6167766_GGTCGTGT_L001_17236_1     4 0.000
#> lane1_3600STDY6167767_GAATCTGT_L001_17236_1     4 0.000
#> lane1_3600STDY6167768_GTACATCT_L001_17236_1     4 0.000
#> lane1_3600STDY6167769_GAGGTGCT_L001_17236_1     1 1.000
#> lane1_3600STDY6167770_GCATGGCT_L001_17236_1     1 1.000
#> lane1_3600STDY6167771_GTTAGCCT_L001_17236_1     4 0.000
#> lane1_3600STDY6167772_GTCGCTAT_L001_17236_1     1 1.000
#> lane1_3600STDY6167773_GGAATGAT_L001_17236_1     4 0.000
#> lane1_3600STDY6167774_GAGCCAAT_L001_17236_1     4 0.000
#> lane1_3600STDY6167775_GCTCCTTG_L001_17236_1     4 1.000
#> lane1_3600STDY6167776_GTAAGGTG_L001_17236_1     2 0.000
#> lane1_3600STDY6167777_GAGGATGG_L001_17236_1     4 0.000
#> lane1_3600STDY6167778_GTTGTCGG_L001_17236_1     2 0.000
#> lane1_3600STDY6167779_GGATTAGG_L001_17236_1     4 0.000
#> lane1_3600STDY6167780_GATAGAGG_L001_17236_1     4 0.000
#> lane1_3600STDY6167781_GTGTGTCG_L001_17236_1     4 0.000
#> lane1_3600STDY6167782_GCAATCCG_L001_17236_1     4 0.000
#> lane1_3600STDY6167783_GACCTTAG_L001_17236_1     1 1.000
#> lane1_3600STDY6167784_GCCTGTTC_L001_17236_1     4 0.000
#> lane1_3600STDY6167785_GCACTGTC_L001_17236_1     4 0.000
#> lane1_3600STDY6167786_GCTAACTC_L001_17236_1     4 0.000
#> lane1_3600STDY6167787_GATTCATC_L001_17236_1     4 0.000
#> lane1_3600STDY6167788_GTCTTGGC_L001_17236_1     2 0.000
#> lane1_3600STDY6167789_GTAGAAGC_L001_17236_1     4 1.000
#> lane1_3600STDY6167790_GATGGTCC_L001_17236_1     4 0.000
#> lane1_3600STDY6167791_GTGCTACC_L001_17236_1     4 0.000
#> lane1_3600STDY6167792_GCGATTAC_L001_17236_1     4 0.502
#> lane1_3600STDY6167793_GGTTGGAC_L001_17236_1     4 0.000
#> lane1_3600STDY6167794_GGCACAAC_L001_17236_1     1 1.000
#> lane1_3600STDY6167795_GACACTTA_L001_17236_1     4 0.000
#> lane1_3600STDY6167796_GTGCAGTA_L001_17236_1     1 1.000
#> lane1_3600STDY6167797_GGAGTCTA_L001_17236_1     1 1.000
#> lane1_3600STDY6167798_GCTATGGA_L001_17236_1     4 0.000
#> lane1_3600STDY6167799_GAGTGCGA_L001_17236_1     4 0.249
#> lane1_3600STDY6167800_GTAACCGA_L001_17236_1     1 1.000
#> lane1_3600STDY6167801_GGCAAGCA_L001_17236_1     4 0.000
#> lane1_3600STDY6167802_GCCTTACA_L001_17236_1     1 1.000
#> lane1_3600STDY6167803_GAACGACA_L001_17236_1     4 0.000
#> lane1_3600STDY6167804_GCAGGTAA_L001_17236_1     1 1.000
#> lane1_3600STDY6167805_GCGTCGAA_L001_17236_1     1 1.000
#> lane1_3600STDY6167806_CGTTCGGT_L001_17236_1     4 0.000
#> lane1_3600STDY6167807_CACCAGGT_L001_17236_1     4 0.000
#> lane1_3600STDY6167808_CTGCGAGT_L001_17236_1     4 0.000
#> lane1_3600STDY6167809_CCGTATCT_L001_17236_1     1 1.000
#> lane1_3600STDY6167810_CGCTTCCT_L001_17236_1     3 1.000
#> lane1_3600STDY6167811_CAAGACCT_L001_17236_1     4 0.000
#> lane1_3600STDY6167812_CACACACT_L001_17236_1     1 0.000
#> lane1_3600STDY6167813_CCTAGTAT_L001_17236_1     2 0.000
#> lane1_3600STDY6167814_CCACCGAT_L001_17236_1     4 0.000
#> lane1_3600STDY6167815_CTTCACAT_L001_17236_1     4 0.000
#> lane1_3600STDY6167816_CTATCATG_L001_17236_1     4 0.000
#> lane1_3600STDY6167817_CATGAATG_L001_17236_1     4 0.000
#> lane1_3600STDY6167818_CCACTTGG_L001_17236_1     4 0.000
#> lane1_3600STDY6167819_CTGTACGG_L001_17236_1     4 0.000
#> lane1_3600STDY6167820_CTAGATAG_L001_17236_1     4 0.000
#> lane1_3600STDY6167821_CACTCGAG_L001_17236_1     4 0.000
#> lane1_3600STDY6167822_CCGACAAG_L001_17236_1     4 0.000
#> lane1_3600STDY6167823_CTTGCTTC_L001_17236_1     1 1.000
#> lane1_3600STDY6167824_CATAGGTC_L001_17236_1     4 0.000
#> lane1_3600STDY6167825_CACATTGC_L001_17236_1     1 0.249
#> lane1_3600STDY6167826_CGCTAAGC_L001_17236_1     1 1.000
#> lane1_3600STDY6167827_CAACCTCC_L001_17236_1     4 1.000
#> lane1_3600STDY6167828_CAGCTGAC_L001_17236_1     4 1.000
#> lane1_3600STDY6167829_CTCAAGAC_L001_17236_1     4 1.000
#> lane1_3600STDY6167830_CGTGTCAC_L001_17236_1     4 0.000
#> lane1_3600STDY6167831_CCATGCAC_L001_17236_1     4 0.000
#> lane1_3600STDY6167832_CGTTACTA_L001_17236_1     4 0.000
#> lane1_3600STDY6167833_CAAGTAGA_L001_17236_1     1 1.000
#> lane1_3600STDY6167834_CTCTCTCA_L001_17236_1     4 0.000
#> lane1_3600STDY6167835_CGACTGCA_L001_17236_1     4 0.000
#> lane1_3600STDY6167836_CCTGAGCA_L001_17236_1     4 0.000
#> lane1_3600STDY6167837_CAGGCTAA_L001_17236_1     4 1.000
#> lane1_3600STDY6167838_CGGAGGAA_L001_17236_1     4 0.000
#> lane1_3600STDY6167839_AGGAGATT_L001_17236_1     1 1.000
#> lane1_3600STDY6167840_AGGCAGCT_L001_17236_1     4 0.000
#> lane1_3600STDY6167841_ACGTTCAT_L001_17236_1     4 0.000
#> lane1_3600STDY6167842_AACGTGTG_L001_17236_1     4 1.000
#> lane1_3600STDY6167843_AGACCGTG_L001_17236_1     4 0.000
#> lane1_3600STDY6167844_ACCTCTGG_L001_17236_1     2 0.000
#> lane1_3600STDY6167845_ATCCTAGG_L001_17236_1     4 1.000
#> lane1_3600STDY6167846_ATCAACCG_L001_17236_1     4 1.000
#> lane1_3600STDY6167847_AGGTCACG_L001_17236_1     2 0.000
#> lane1_3600STDY6167848_ACTGTTAG_L001_17236_1     4 0.000
#> lane1_3600STDY6167849_AAGAGTAG_L001_17236_1     4 1.000
#> lane1_3600STDY6167850_ATTCGGAG_L001_17236_1     4 1.000
#> lane1_3600STDY6167851_ACGCAATC_L001_17236_1     1 1.000
#> lane1_3600STDY6167852_ACAAGTGC_L001_17236_1     4 1.000
#> lane1_3600STDY6167853_ATGGATCC_L001_17236_1     4 0.000
#> lane1_3600STDY6167854_AGAGGACC_L001_17236_1     4 1.000
#> lane1_3600STDY6167855_ATCTCCAC_L001_17236_1     4 0.000
#> lane1_3600STDY6167856_ATTGGCTA_L001_17236_1     4 0.000
#> lane1_3600STDY6167857_AATCCTGA_L001_17236_1     2 0.000
#> lane1_3600STDY6167858_AGGATTCA_L001_17236_1     2 0.000
#> lane1_3600STDY6167859_AACTGGCA_L001_17236_1     4 0.000
#> lane1_3600STDY6167860_ACAACGCA_L001_17236_1     4 0.000
#> lane1_3600STDY6167861_CGGAAACA_L001_17236_1     2 0.000
#> lane1_3600STDY6167862_AATGAATT_L001_17236_1     1 1.000
#> lane1_3600STDY6167863_TAGGACCC_L001_17236_1     4 0.000
#> lane1_3600STDY6167864_TCTCAGTG_L001_17236_1     4 0.502
#> lane1_3600STDY6167865_CATGGGAA_L001_17236_1     1 1.000
#> lane1_3600STDY6167866_CCTAAGAT_L001_17236_1     4 0.000
#> lane1_3600STDY6167867_CTCAGATA_L001_17236_1     4 0.000
#> lane1_3600STDY6167868_CCCATAGG_L001_17236_1     1 1.000
#> lane1_3600STDY6167869_GCTATGAC_L001_17236_1     4 0.000
#> lane1_3600STDY6167870_GCTGTGAA_L001_17236_1     2 0.000
#> lane1_3600STDY6167871_ACCTTCAA_L001_17236_1     2 0.000
#> lane1_3600STDY6167872_ACAAAGCC_L001_17236_1     2 0.000
#> lane1_3600STDY6167873_CAAAACCG_L001_17236_1     2 0.000
#> lane1_3600STDY6167874_GCTGGACA_L001_17236_1     1 1.000
#> lane1_3600STDY6167875_AAGTCGTA_L001_17236_1     4 0.000
#> lane1_3600STDY6167876_CATCCGTA_L001_17236_1     4 0.000
#> lane1_3600STDY6167877_TTGTGTCT_L001_17236_1     4 0.000
#> lane1_3600STDY6167878_TGCTCTAG_L001_17236_1     4 0.000
#> lane1_3600STDY6167879_ACCCAACA_L001_17236_1     2 0.000
#> lane1_3600STDY6167880_CGATCTGA_L001_17236_1     4 0.000
#> lane1_3600STDY6167881_GTTCCACG_L001_17236_1     1 1.000
#> lane1_3600STDY6167882_ACTCTTTC_L001_17236_1     4 0.000
#> lane1_3600STDY6167883_TATTGGAG_L001_17236_1     2 0.000
#> lane1_3600STDY6167884_TAAACATA_L001_17236_1     2 0.000
#> lane1_3600STDY6167885_GTAAGATA_L001_17236_1     4 0.000
#> lane1_3600STDY6167886_TACCGCAA_L001_17236_1     4 0.000
#> lane1_3600STDY6167887_TATCTCCT_L001_17236_1     4 0.000
#> lane1_3600STDY6167888_TGTCATCT_L001_17236_1     4 0.000
#> lane1_3600STDY6167889_ATAGCTCT_L001_17236_1     4 0.000
#> lane1_3600STDY6167890_AGTCCAAC_L001_17236_1     4 1.000
#> lane1_3600STDY6167891_TTTGGGCA_L001_17236_1     4 0.000
#> lane1_3600STDY6167892_TCTGACGC_L001_17236_1     1 1.000
#> lane1_3600STDY6167893_TGTCGACT_L001_17236_1     1 1.000
#> lane1_3600STDY6167894_GTCACGTA_L001_17236_1     1 1.000
#> lane1_3600STDY6167895_TTGAGCGA_L001_17236_1     1 1.000
#> lane1_3600STDY6167896_GAGACATA_L001_17236_1     4 0.000
#> lane1_3600STDY6167897_GTCAAGCT_L001_17236_1     3 1.000
#> lane1_3600STDY6167898_AGCAAGTT_L001_17236_1     4 0.000
#> lane1_3600STDY6167899_GACGCTCA_L001_17236_1     4 0.000
#> lane1_3600STDY6167900_ACGGCAGC_L001_17236_1     4 0.000
#> lane1_3600STDY6167901_AGAACTGA_L001_17236_1     4 0.000
#> lane1_3600STDY6167902_CGCCTTTG_L001_17236_1     4 0.000
#> lane1_3600STDY6167903_TAAGGTCA_L001_17236_1     4 0.000
#> lane1_3600STDY6167904_ACGTTGGC_L001_17236_1     4 0.000
#> lane1_3600STDY6167905_CCAGCTTA_L001_17236_1     4 0.000
#> lane1_3600STDY6167906_GAATCCTA_L001_17236_1     4 0.000
#> lane1_3600STDY6167907_ACTTCGTA_L001_17236_1     4 0.000
#> lane1_3600STDY6167908_TAGTCGGT_L001_17236_1     2 0.000
#> lane1_3600STDY6167909_CGCACGAG_L001_17236_1     4 0.000
#> lane1_3600STDY6167910_ACGTACTA_L001_17236_1     4 0.000
#> lane1_3600STDY6167911_AGCGCCAA_L001_17236_1     4 0.000
#> lane1_3600STDY6167912_GCCTGCCC_L001_17236_1     4 0.000
#> lane1_3600STDY6167913_AGGACGAT_L001_17236_1     4 1.000
#> lane1_3600STDY6167914_CTTGACCG_L001_17236_1     4 0.000
#> lane1_3600STDY6167915_AGGTCTAA_L001_17236_1     4 0.253
#> lane1_3600STDY6167916_CGAGATCC_L001_17236_1     4 1.000
#> lane1_3600STDY6167917_ATTAGCGG_L001_17236_1     4 1.000
#> lane1_3600STDY6167918_GCGCTGAT_L001_17236_1     2 0.000
#> lane1_3600STDY6167919_TGCTGAAC_L001_17236_1     1 1.000
#> lane1_3600STDY6167920_GAGGGCAG_L001_17236_1     2 0.000
#> lane1_3600STDY6167921_GTTTTCAC_L001_17236_1     4 0.000
#> lane1_3600STDY6167922_GAGATGCC_L001_17236_1     4 0.000
#> lane1_3600STDY6167923_TTGAGAAG_L001_17236_1     4 0.000
#> lane1_3600STDY6167924_GCATCCGG_L001_17236_1     4 0.000
#> lane1_3600STDY6167925_GTCACCAG_L001_17236_1     4 0.000
#> lane1_3600STDY6167926_GAGGTCGC_L001_17236_1     4 0.000
#> lane1_3600STDY6167927_AAGGGGTA_L001_17236_1     4 0.000
#> lane1_3600STDY6167928_TTTTACGT_L001_17236_1     4 0.000
#> lane1_3600STDY6167929_TTCCTACA_L001_17236_1     4 0.502
#> lane1_3600STDY6167930_AGTGTAGT_L001_17236_1     1 1.000
#> lane1_3600STDY6167931_GTGGCCAA_L001_17236_1     4 0.000
#> lane1_3600STDY6167932_AAATACTC_L001_17236_1     1 1.000
#> lane1_3600STDY6167933_CACCCGTC_L001_17236_1     4 0.000
#> lane1_3600STDY6167934_TCGTGGTT_L001_17236_1     4 0.000
#> lane1_3600STDY6167935_ACTTGGGG_L001_17236_1     1 1.000
#> lane1_3600STDY6167936_GGCTGCTT_L001_17236_1     4 0.000
#> lane1_3600STDY6167937_CAGGGTCG_L001_17236_1     4 0.000
#> lane1_3600STDY6167938_CTCGTCGA_L001_17236_1     4 0.502
#> lane1_3600STDY6167939_TCTACAGT_L001_17236_1     4 0.000
#> lane1_3600STDY6167940_CTTCTAGA_L001_17236_1     4 0.000
#> lane1_3600STDY6167941_AACGGCTT_L001_17236_1     1 1.000
#> lane1_3600STDY6167942_ATAAGACT_L001_17236_1     1 1.000
#> lane1_3600STDY6167943_GTTTTTCG_L001_17236_1     4 0.000
#> lane1_3600STDY6167944_ATTGGTAT_L001_17236_1     4 0.000
#> lane1_3600STDY6167945_CGCCAGTA_L001_17236_1     4 0.000
#> lane1_3600STDY6167946_AAGCCGAA_L001_17236_1     4 0.000
#> lane1_3600STDY6167947_TGACCCAC_L001_17236_1     4 0.000
#> lane1_3600STDY6167948_ATTGCACA_L001_17236_1     4 0.000
#> lane1_3600STDY6167949_CTTTTGAT_L001_17236_1     4 0.000
#> lane1_3600STDY6167950_TAGCGAGA_L001_17236_1     2 0.000
#> lane1_3600STDY6167951_TTCGCAGG_L001_17236_1     4 0.000
#> lane1_3600STDY6167952_TAGTTATT_L001_17236_1     4 1.000
#> lane1_3600STDY6167953_TCCTCCGA_L001_17236_1     4 0.000
#> lane1_3600STDY6167954_GCGGGTCT_L001_17236_1     4 0.000
#> lane1_3600STDY6167955_GATTCTAT_L001_17236_1     4 1.000
#> lane1_3600STDY6167956_ATGCAAAG_L001_17236_1     1 1.000
#> lane1_3600STDY6167957_GTCTGAGG_L001_17236_1     4 0.000
#> lane1_3600STDY6167958_TCTGGCGA_L001_17236_1     4 0.000
#> lane1_3600STDY6167959_AATTTGCG_L001_17236_1     4 0.498
#> lane1_3600STDY6167960_TGGGTTGG_L001_17236_1     4 0.249
#> lane1_3600STDY6167961_AGTTGAAA_L001_17236_1     4 0.000
#> lane1_3600STDY6167962_GACCGGAA_L001_17236_1     4 0.000
#> lane1_3600STDY6167963_GATCGAAC_L001_17236_1     4 0.000
#> lane1_3600STDY6167964_GTATAGGG_L001_17236_1     4 0.000
#> lane1_3600STDY6167965_GGTAAGAG_L001_17236_1     2 0.000
#> lane1_3600STDY6167966_AGTCCGAT_L001_17236_1     4 0.000
#> lane1_3600STDY6167967_ATACAGGC_L001_17236_1     4 0.000
#> lane1_3600STDY6167968_TGAGACTC_L001_17236_1     4 0.000
#> lane1_3600STDY6167969_ACTCAGGA_L001_17236_1     4 0.000
#> lane1_3600STDY6167970_GTGTCTGA_L001_17236_1     4 0.000
#> lane1_3600STDY6167971_CTTGAATC_L001_17236_1     4 0.000
#> lane1_3600STDY6167972_CCGCATGA_L001_17236_1     4 0.000
#> lane1_3600STDY6167973_AAGTAACA_L001_17236_1     4 0.000
#> lane1_3600STDY6167974_GTGGTACT_L001_17236_1     4 0.000
#> lane1_3600STDY6167975_AGCTGTGC_L001_17236_1     4 0.000
#> lane1_3600STDY6167976_TTACCTTC_L001_17236_1     4 0.000
#> lane1_3600STDY6167977_TCCGGGTA_L001_17236_1     4 1.000
#> lane1_3600STDY6167978_CTACGTAA_L001_17236_1     1 1.000
#> lane1_3600STDY6167979_TCGGACCG_L001_17236_1     1 1.000
#> lane1_3600STDY6167980_ATGCGTCG_L001_17236_1     1 1.000
#> lane1_3600STDY6167981_TTCTTAGC_L001_17236_1     4 0.000
#> lane1_3600STDY6167982_TGAGTAAG_L001_17236_1     4 0.000
#> lane1_3600STDY6167983_AAGTGATA_L001_17236_1     4 0.000
#> lane1_3600STDY6167984_TCGATGCG_L001_17236_1     4 0.000
#> lane1_3600STDY6167985_TATTCTGG_L001_17236_1     4 0.000
#> lane1_3600STDY6167986_AGCCGTGA_L001_17236_1     4 0.000
#> lane1_3600STDY6167987_AAGCCTTC_L001_17236_1     4 0.000
#> lane1_3600STDY6167988_AGGTATCC_L001_17236_1     4 0.000
#> lane1_3600STDY6167989_AGGATCTC_L001_17236_1     2 0.000
#> lane1_3600STDY6167990_CTGTTTGA_L001_17236_1     4 0.253
#> lane1_3600STDY6167991_GGAATTTC_L001_17236_1     4 0.000
#> lane1_3600STDY6167992_TTGGAGCA_L001_17236_1     4 0.000
#> lane1_3600STDY6167993_AAGGTCTG_L001_17236_1     4 1.000
#> lane1_3600STDY6167994_AATTAGGC_L001_17236_1     4 0.000
#> lane1_3600STDY6167995_AATCGGGT_L001_17236_1     4 0.000
#> lane1_3600STDY6167996_AGGTAGAC_L001_17236_1     4 0.000
#> lane1_3600STDY6167997_CTTATTCC_L001_17236_1     4 0.000
#> lane1_3600STDY6167998_CAGGCTCT_L001_17236_1     4 0.000
#> lane1_3600STDY6167999_AAAGCACG_L001_17236_1     1 1.000
#> lane1_3600STDY6168000_GTATACAC_L001_17236_1     4 0.000
#> lane1_3600STDY6168001_GGACATAT_L001_17236_1     4 1.000
#> lane1_3600STDY6168002_CGGTTGGG_L001_17236_1     4 0.000
#> lane1_3600STDY6168003_GTCCGTGA_L001_17236_1     4 0.000
#> lane1_3600STDY6168004_GCCGAACC_L001_17236_1     4 1.000
#> lane1_3600STDY6168005_ACTTTACT_L001_17236_1     4 0.000
#> lane1_3600STDY6168006_GGGTCCAT_L001_17236_1     4 0.000
#> lane1_3600STDY6168007_ATAACTAG_L001_17236_1     4 0.000
#> lane1_3600STDY6168008_AATAGAGA_L001_17236_1     4 0.000
#> lane1_3600STDY6168009_TCACCATT_L001_17236_1     4 0.000
#> lane1_3600STDY6168010_CGCCTGAT_L001_17236_1     4 0.000
#> lane1_3600STDY6168011_GCGTGAAC_L001_17236_1     4 0.000
#> lane1_3600STDY6168012_TAAGGGTG_L001_17236_1     4 0.000
#> lane1_3600STDY6168013_GGTGTCGA_L001_17236_1     4 0.000
#> lane1_3600STDY6168014_CCGTTAGG_L001_17236_1     4 0.000
#> lane1_3600STDY6168015_TGGCAAAA_L001_17236_1     4 0.000
#> lane1_3600STDY6168016_CCTACCCG_L001_17236_1     2 0.000
#> lane1_3600STDY6168017_AACAGCGC_L001_17236_1     4 0.000
#> lane1_3600STDY6168018_TATACATC_L001_17236_1     2 0.000
#> lane1_3600STDY6168019_AAGCGACT_L001_17236_1     4 0.000
#> lane1_3600STDY6168020_GAAGCGCA_L001_17236_1     4 0.000
#> lane1_3600STDY6168021_ACCTCTAC_L001_17236_1     4 0.000
#> lane1_3600STDY6168022_GATTGCGT_L001_17236_1     4 0.000
#> lane1_3600STDY6168023_GCTGGTTG_L001_17236_1     2 0.000
#> lane1_3600STDY6168024_ATCGTCCT_L001_17236_1     4 0.000
#> lane1_3600STDY6168025_GGACACGG_L001_17236_1     4 0.000
#> lane1_3600STDY6168026_CGCACCTA_L001_17236_1     4 0.000
#> lane1_3600STDY6168027_CTTCGGCT_L001_17236_1     4 1.000
#> lane1_3600STDY6168028_CGAATCGA_L001_17236_1     1 1.000
#> lane1_3600STDY6168029_TAACAACT_L001_17236_1     4 0.000
#> lane1_3600STDY6168030_AGCTCTTT_L001_17236_1     4 0.000
#> lane1_3600STDY6168031_TAATCCCT_L001_17236_1     4 0.000
#> lane1_3600STDY6168032_AGGACACT_L001_17236_1     4 0.000
#> lane1_3600STDY6168033_TTACACTA_L001_17236_1     1 1.000
#> lane1_3600STDY6168034_AAACATCA_L001_17236_1     4 0.000
#> lane1_3600STDY6168035_CCATAGCT_L001_17236_1     4 0.000
#> lane1_3600STDY6168036_GTTATGGC_L001_17236_1     4 0.000
#> lane1_3600STDY6168037_ATCCCCTA_L001_17236_1     4 0.000
#> lane1_3600STDY6168038_CATACTAC_L001_17236_1     1 1.000
#> lane1_3600STDY6168039_CAATTGTT_L001_17236_1     4 1.000
#> lane1_3600STDY6168040_AAACCCGT_L001_17236_1     2 0.000
#> lane1_3600STDY6168041_CAGATTTC_L001_17236_1     4 0.000
#> lane1_3600STDY6168042_GCGTAGGT_L001_17236_1     4 0.000
#> lane1_3600STDY6168043_GGCATTCG_L001_17236_1     4 0.000
#> lane1_3600STDY6168044_TGGGGCTT_L001_17236_1     4 0.000
#> lane1_3600STDY6168045_CTGACTAC_L001_17236_1     4 0.000
#> lane1_3600STDY6168046_AACTTTTA_L001_17236_1     4 0.000
#> lane1_3600STDY6168047_AGGGATTC_L001_17236_1     4 0.000
#> lane1_3600STDY6168048_CCGAGTAG_L001_17236_1     4 0.000
#> lane1_3600STDY6168049_GGGGACTA_L001_17236_1     4 0.000
#> lane1_3600STDY6168050_GGAGTTGA_L001_17236_1     4 0.000
#> lane1_3600STDY6168051_AGCTCATC_L001_17236_1     1 1.000
#> lane1_3600STDY6168052_TAATCAAC_L001_17236_1     4 0.000
#> lane1_3600STDY6168053_ACTGGTCG_L001_17236_1     4 0.000
#> lane1_3600STDY6168054_GACGATTG_L001_17236_1     4 0.000
#> lane1_3600STDY6168055_AGCGATGA_L001_17236_1     4 0.000
#> lane1_3600STDY6168056_GAAGAGAT_L001_17236_1     4 0.000
#> lane1_3600STDY6168057_CGTATGCA_L001_17236_1     4 1.000
#> lane1_3600STDY6168058_CACGTGCG_L001_17236_1     4 0.000
#> lane1_3600STDY6168059_GCTTAAAC_L001_17236_1     4 0.000
#> lane1_3600STDY6168060_GTTCCGCA_L001_17236_1     4 0.000
#> lane1_3600STDY6168061_GTATCGTC_L001_17236_1     4 0.000
#> lane1_3600STDY6168062_GTCCTCAC_L001_17236_1     1 1.000
#> lane1_3600STDY6168063_GTACGGAC_L001_17236_1     2 0.000
#> lane1_3600STDY6168064_CATTTTGC_L001_17236_1     2 0.000
#> lane1_3600STDY6168065_TCCTCTCT_L001_17236_1     4 1.000
#> lane1_3600STDY6168066_AGCAACGA_L001_17236_1     4 0.000
#> lane1_3600STDY6168067_ACAGAAGA_L001_17236_1     4 0.000
#> lane1_3600STDY6168068_CGACCCTT_L001_17236_1     4 0.000
#> lane1_3600STDY6168069_CTGCCTAG_L001_17236_1     2 0.000
#> lane1_3600STDY6168070_GAGCGCAT_L001_17236_1     4 0.000
#> lane1_3600STDY6168071_AACTTATC_L001_17236_1     4 0.000
#> lane1_3600STDY6168072_CCGATGTA_L001_17236_1     4 0.000
#> lane1_3600STDY6168073_TTACTACC_L001_17236_1     4 0.000
#> lane1_3600STDY6168074_CAAGGAGC_L001_17236_1     4 1.000
#> lane1_3600STDY6168075_TGGTTGAC_L001_17236_1     2 0.000
#> lane1_3600STDY6168076_ACCTGCTG_L001_17236_1     2 0.000
#> lane4_3600STDY6184181_ATCACGTT_L004_17480_1     3 0.000
#> lane4_3600STDY6184182_CGATGTTT_L004_17480_1     3 0.000
#> lane4_3600STDY6184183_TTAGGCAT_L004_17480_1     3 0.000
#> lane4_3600STDY6184184_TGACCACT_L004_17480_1     3 0.000
#> lane4_3600STDY6184185_ACAGTGGT_L004_17480_1     3 0.000
#> lane4_3600STDY6184186_GCCAATGT_L004_17480_1     3 0.000
#> lane4_3600STDY6184187_CAGATCTG_L004_17480_1     3 0.000
#> lane4_3600STDY6184188_ACTTGATG_L004_17480_1     2 0.000
#> lane4_3600STDY6184189_GATCAGCG_L004_17480_1     3 0.000
#> lane4_3600STDY6184190_TAGCTTGT_L004_17480_1     3 0.000
#> lane4_3600STDY6184191_GGCTACAG_L004_17480_1     3 0.000
#> lane4_3600STDY6184192_CTTGTACT_L004_17480_1     2 0.000
#> lane4_3600STDY6184193_TGGTTGTT_L004_17480_1     3 0.000
#> lane4_3600STDY6184194_TCTCGGTT_L004_17480_1     3 0.000
#> lane4_3600STDY6184195_TAAGCGTT_L004_17480_1     3 0.000
#> lane4_3600STDY6184196_TCCGTCTT_L004_17480_1     3 0.000
#> lane4_3600STDY6184197_TGTACCTT_L004_17480_1     3 0.000
#> lane4_3600STDY6184198_TTCTGTGT_L004_17480_1     3 0.000
#> lane4_3600STDY6184199_TCTGCTGT_L004_17480_1     2 1.000
#> lane4_3600STDY6184200_TTGGAGGT_L004_17480_1     2 1.000
#> lane4_3600STDY6184201_TCGAGCGT_L004_17480_1     3 0.000
#> lane4_3600STDY6184202_TGATACGT_L004_17480_1     3 0.000
#> lane4_3600STDY6184203_TGCATAGT_L004_17480_1     3 0.000
#> lane4_3600STDY6184204_TTGACTCT_L004_17480_1     3 0.000
#> lane4_3600STDY6184205_TGCGATCT_L004_17480_1     3 0.000
#> lane4_3600STDY6184206_TTCCTGCT_L004_17480_1     3 0.000
#> lane4_3600STDY6184207_TAGTGACT_L004_17480_1     3 0.000
#> lane4_3600STDY6184208_TACAGGAT_L004_17480_1     2 1.000
#> lane4_3600STDY6184209_TCCTCAAT_L004_17480_1     3 0.000
#> lane4_3600STDY6184210_TGTGGTTG_L004_17480_1     3 0.000
#> lane4_3600STDY6184211_TAGTCTTG_L004_17480_1     2 1.000
#> lane4_3600STDY6184212_TTCCATTG_L004_17480_1     2 0.000
#> lane4_3600STDY6184213_TCGAAGTG_L004_17480_1     2 0.000
#> lane4_3600STDY6184214_TAACGCTG_L004_17480_1     3 0.000
#> lane4_3600STDY6184215_TTGGTATG_L004_17480_1     2 1.000
#> lane4_3600STDY6184216_TGAACTGG_L004_17480_1     2 0.000
#> lane4_3600STDY6184217_TACTTCGG_L004_17480_1     2 1.000
#> lane4_3600STDY6184218_TCTCACGG_L004_17480_1     3 0.000
#> lane4_3600STDY6184219_TCAGGAGG_L004_17480_1     2 1.000
#> lane4_3600STDY6184220_TAAGTTCG_L004_17480_1     3 0.000
#> lane4_3600STDY6184221_TCCAGTCG_L004_17480_1     3 0.000
#> lane4_3600STDY6184222_TGTATGCG_L004_17480_1     2 0.000
#> lane4_3600STDY6184223_TCATTGAG_L004_17480_1     2 1.000
#> lane4_3600STDY6184224_TGGCTCAG_L004_17480_1     2 0.249
#> lane4_3600STDY6184225_TATGCCAG_L004_17480_1     3 0.000
#> lane4_3600STDY6184226_TCAGATTC_L004_17480_1     3 0.000
#> lane4_3600STDY6184227_TACTAGTC_L004_17480_1     2 1.000
#> lane4_3600STDY6184228_TTCAGCTC_L004_17480_1     3 0.000
#> lane4_3600STDY6184229_TGTCTATC_L004_17480_1     3 0.000
#> lane4_3600STDY6184230_TATGTGGC_L004_17480_1     2 1.000
#> lane4_3600STDY6184231_TTACTCGC_L004_17480_1     2 1.000
#> lane4_3600STDY6184232_TCGTTAGC_L004_17480_1     3 0.000
#> lane4_3600STDY6184233_TACCGAGC_L004_17480_1     3 0.000
#> lane4_3600STDY6184234_TGTTCTCC_L004_17480_1     2 0.000
#> lane4_3600STDY6184235_TTCGCACC_L004_17480_1     3 0.000
#> lane4_3600STDY6184236_TTGCGTAC_L004_17480_1     3 0.000
#> lane4_3600STDY6184237_TCTACGAC_L004_17480_1     3 0.000
#> lane4_3600STDY6184238_TGACAGAC_L004_17480_1     2 0.498
#> lane4_3600STDY6184239_TAGAACAC_L004_17480_1     3 0.000
#> lane4_3600STDY6184240_TCATCCTA_L004_17480_1     2 1.000
#> lane4_3600STDY6184241_TGCTGATA_L004_17480_1     3 0.000
#> lane4_3600STDY6184242_TAGACGGA_L004_17480_1     3 0.000
#> lane4_3600STDY6184243_TGTGAAGA_L004_17480_1     3 0.000
#> lane4_3600STDY6184244_TCTCTTCA_L004_17480_1     2 1.000
#> lane4_3600STDY6184245_TTGTTCCA_L004_17480_1     3 0.000
#> lane4_3600STDY6184246_TGAAGCCA_L004_17480_1     2 0.000
#> lane4_3600STDY6184247_TACCACCA_L004_17480_1     2 0.000
#> lane4_3600STDY6184248_TGCGTGAA_L004_17480_1     2 0.751
#> lane4_3600STDY6184249_GGTGAGTT_L004_17480_1     3 0.000
#> lane4_3600STDY6184250_GATCTCTT_L004_17480_1     3 0.000
#> lane4_3600STDY6184251_GTGTCCTT_L004_17480_1     3 0.000
#> lane4_3600STDY6184252_GACGGATT_L004_17480_1     3 0.000
#> lane4_3600STDY6184253_GCAACATT_L004_17480_1     3 0.000
#> lane4_3600STDY6184254_GGTCGTGT_L004_17480_1     2 0.000
#> lane4_3600STDY6184255_GAATCTGT_L004_17480_1     3 0.000
#> lane4_3600STDY6184256_GTACATCT_L004_17480_1     2 1.000
#> lane4_3600STDY6184257_GAGGTGCT_L004_17480_1     2 1.000
#> lane4_3600STDY6184258_GCATGGCT_L004_17480_1     2 1.000
#> lane4_3600STDY6184259_GTTAGCCT_L004_17480_1     2 0.747
#> lane4_3600STDY6184260_GTCGCTAT_L004_17480_1     2 0.000
#> lane4_3600STDY6184261_GGAATGAT_L004_17480_1     2 0.000
#> lane4_3600STDY6184262_GAGCCAAT_L004_17480_1     2 0.751
#> lane4_3600STDY6184263_GCTCCTTG_L004_17480_1     2 0.249
#> lane4_3600STDY6184264_GTAAGGTG_L004_17480_1     2 0.000
#> lane4_3600STDY6184265_GAGGATGG_L004_17480_1     2 0.000
#> lane4_3600STDY6184266_GTTGTCGG_L004_17480_1     3 0.000
#> lane4_3600STDY6184267_GGATTAGG_L004_17480_1     2 0.502
#> lane4_3600STDY6184268_GATAGAGG_L004_17480_1     3 0.000
#> lane4_3600STDY6184269_GTGTGTCG_L004_17480_1     3 0.000
#> lane4_3600STDY6184270_GCAATCCG_L004_17480_1     2 0.000
#> lane4_3600STDY6184271_GACCTTAG_L004_17480_1     2 0.000
#> lane4_3600STDY6184272_GCCTGTTC_L004_17480_1     2 0.000
#> lane4_3600STDY6184273_GCACTGTC_L004_17480_1     2 0.000
#> lane4_3600STDY6184274_GCTAACTC_L004_17480_1     3 0.000
#> lane4_3600STDY6184275_GATTCATC_L004_17480_1     2 0.751
#> lane4_3600STDY6184276_GTCTTGGC_L004_17480_1     3 0.000
#> lane4_3600STDY6184277_GTAGAAGC_L004_17480_1     3 0.000
#> lane4_3600STDY6184278_GATGGTCC_L004_17480_1     3 0.000
#> lane4_3600STDY6184279_GTGCTACC_L004_17480_1     3 0.000
#> lane4_3600STDY6184280_GCGATTAC_L004_17480_1     2 0.747
#> lane4_3600STDY6184281_GGTTGGAC_L004_17480_1     3 0.000
#> lane4_3600STDY6184282_GGCACAAC_L004_17480_1     2 0.000
#> lane4_3600STDY6184283_GACACTTA_L004_17480_1     2 0.000
#> lane4_3600STDY6184284_GTGCAGTA_L004_17480_1     3 0.000
#> lane4_3600STDY6184285_GGAGTCTA_L004_17480_1     2 1.000
#> lane4_3600STDY6184286_GCTATGGA_L004_17480_1     2 0.000
#> lane4_3600STDY6184287_GAGTGCGA_L004_17480_1     3 0.249
#> lane4_3600STDY6184288_GTAACCGA_L004_17480_1     3 0.000
#> lane4_3600STDY6184289_GGCAAGCA_L004_17480_1     3 0.000
#> lane4_3600STDY6184290_GCCTTACA_L004_17480_1     2 0.000
#> lane4_3600STDY6184291_GAACGACA_L004_17480_1     3 0.000
#> lane4_3600STDY6184292_GCAGGTAA_L004_17480_1     3 0.000
#> lane4_3600STDY6184293_GCGTCGAA_L004_17480_1     3 0.000
#> lane4_3600STDY6184294_CGTTCGGT_L004_17480_1     2 0.000
#> lane4_3600STDY6184295_CACCAGGT_L004_17480_1     2 0.498
#> lane4_3600STDY6184296_CTGCGAGT_L004_17480_1     3 0.000
#> lane4_3600STDY6184297_CCGTATCT_L004_17480_1     2 0.000
#> lane4_3600STDY6184298_CGCTTCCT_L004_17480_1     3 0.000
#> lane4_3600STDY6184299_CAAGACCT_L004_17480_1     2 0.249
#> lane4_3600STDY6184300_CACACACT_L004_17480_1     3 0.000
#> lane4_3600STDY6184301_CCTAGTAT_L004_17480_1     3 0.000
#> lane4_3600STDY6184302_CCACCGAT_L004_17480_1     3 0.000
#> lane4_3600STDY6184303_CTTCACAT_L004_17480_1     3 0.000
#> lane4_3600STDY6184304_CTATCATG_L004_17480_1     3 0.000
#> lane4_3600STDY6184305_CATGAATG_L004_17480_1     3 0.000
#> lane4_3600STDY6184306_CCACTTGG_L004_17480_1     2 0.000
#> lane4_3600STDY6184307_CTGTACGG_L004_17480_1     2 0.000
#> lane4_3600STDY6184308_CTAGATAG_L004_17480_1     3 0.000
#> lane4_3600STDY6184309_CACTCGAG_L004_17480_1     2 0.000
#> lane4_3600STDY6184310_CCGACAAG_L004_17480_1     3 0.000
#> lane4_3600STDY6184311_CTTGCTTC_L004_17480_1     2 1.000
#> lane4_3600STDY6184312_CATAGGTC_L004_17480_1     2 0.000
#> lane4_3600STDY6184313_CACATTGC_L004_17480_1     3 1.000
#> lane4_3600STDY6184314_CGCTAAGC_L004_17480_1     2 1.000
#> lane4_3600STDY6184315_CAACCTCC_L004_17480_1     3 0.000
#> lane4_3600STDY6184316_CAGCTGAC_L004_17480_1     3 0.000
#> lane4_3600STDY6184317_CTCAAGAC_L004_17480_1     2 0.000
#> lane4_3600STDY6184318_CGTGTCAC_L004_17480_1     3 0.498
#> lane4_3600STDY6184319_CCATGCAC_L004_17480_1     2 0.000
#> lane4_3600STDY6184320_CGTTACTA_L004_17480_1     3 0.000
#> lane4_3600STDY6184321_CAAGTAGA_L004_17480_1     2 1.000
#> lane4_3600STDY6184322_CTCTCTCA_L004_17480_1     2 0.000
#> lane4_3600STDY6184323_CGACTGCA_L004_17480_1     2 1.000
#> lane4_3600STDY6184324_CCTGAGCA_L004_17480_1     2 0.000
#> lane4_3600STDY6184325_CAGGCTAA_L004_17480_1     3 0.000
#> lane4_3600STDY6184326_CGGAGGAA_L004_17480_1     2 0.000
#> lane4_3600STDY6184327_AGGAGATT_L004_17480_1     3 0.000
#> lane4_3600STDY6184328_AGGCAGCT_L004_17480_1     2 1.000
#> lane4_3600STDY6184329_ACGTTCAT_L004_17480_1     3 0.000
#> lane4_3600STDY6184330_AACGTGTG_L004_17480_1     3 0.000
#> lane4_3600STDY6184331_AGACCGTG_L004_17480_1     2 0.000
#> lane4_3600STDY6184332_ACCTCTGG_L004_17480_1     2 0.000
#> lane4_3600STDY6184333_ATCCTAGG_L004_17480_1     3 0.000
#> lane4_3600STDY6184334_ATCAACCG_L004_17480_1     3 0.000
#> lane4_3600STDY6184335_AGGTCACG_L004_17480_1     3 0.000
#> lane4_3600STDY6184336_ACTGTTAG_L004_17480_1     2 0.000
#> lane4_3600STDY6184337_AAGAGTAG_L004_17480_1     2 1.000
#> lane4_3600STDY6184338_ATTCGGAG_L004_17480_1     2 1.000
#> lane4_3600STDY6184339_ACGCAATC_L004_17480_1     2 1.000
#> lane4_3600STDY6184340_ACAAGTGC_L004_17480_1     2 0.249
#> lane4_3600STDY6184341_ATGGATCC_L004_17480_1     3 0.000
#> lane4_3600STDY6184342_AGAGGACC_L004_17480_1     2 0.000
#> lane4_3600STDY6184343_ATCTCCAC_L004_17480_1     3 0.000
#> lane4_3600STDY6184344_ATTGGCTA_L004_17480_1     3 0.751
#> lane4_3600STDY6184345_AATCCTGA_L004_17480_1     3 0.000
#> lane4_3600STDY6184346_AGGATTCA_L004_17480_1     2 0.000
#> lane4_3600STDY6184347_AACTGGCA_L004_17480_1     2 0.000
#> lane4_3600STDY6184348_ACAACGCA_L004_17480_1     2 0.000
#> lane4_3600STDY6184349_CGGAAACA_L004_17480_1     3 0.000
#> lane4_3600STDY6184350_AATGAATT_L004_17480_1     3 0.000
#> lane4_3600STDY6184351_TAGGACCC_L004_17480_1     3 0.000
#> lane4_3600STDY6184352_TCTCAGTG_L004_17480_1     2 0.000
#> lane4_3600STDY6184353_CATGGGAA_L004_17480_1     3 0.000
#> lane4_3600STDY6184354_CCTAAGAT_L004_17480_1     2 1.000
#> lane4_3600STDY6184355_CTCAGATA_L004_17480_1     2 1.000
#> lane4_3600STDY6184356_CCCATAGG_L004_17480_1     2 0.751
#> lane4_3600STDY6184357_GCTATGAC_L004_17480_1     2 0.000
#> lane4_3600STDY6184358_GCTGTGAA_L004_17480_1     2 0.000
#> lane4_3600STDY6184359_ACCTTCAA_L004_17480_1     2 0.000
#> lane4_3600STDY6184360_ACAAAGCC_L004_17480_1     2 0.000
#> lane4_3600STDY6184361_CAAAACCG_L004_17480_1     2 0.000
#> lane4_3600STDY6184362_GCTGGACA_L004_17480_1     3 0.000
#> lane4_3600STDY6184363_AAGTCGTA_L004_17480_1     2 0.000
#> lane4_3600STDY6184364_CATCCGTA_L004_17480_1     2 0.000
#> lane4_3600STDY6184365_TTGTGTCT_L004_17480_1     2 0.000
#> lane4_3600STDY6184366_TGCTCTAG_L004_17480_1     2 0.751
#> lane4_3600STDY6184367_ACCCAACA_L004_17480_1     2 0.000
#> lane4_3600STDY6184368_CGATCTGA_L004_17480_1     2 0.751
#> lane4_3600STDY6184369_GTTCCACG_L004_17480_1     3 0.000
#> lane4_3600STDY6184370_ACTCTTTC_L004_17480_1     2 0.751
#> lane4_3600STDY6184371_TATTGGAG_L004_17480_1     2 0.000
#> lane4_3600STDY6184372_TAAACATA_L004_17480_1     2 0.000
#> lane4_3600STDY6184373_GTAAGATA_L004_17480_1     2 0.000
#> lane4_3600STDY6184374_TACCGCAA_L004_17480_1     3 0.000
#> lane4_3600STDY6184375_TATCTCCT_L004_17480_1     3 0.000
#> lane4_3600STDY6184376_TGTCATCT_L004_17480_1     3 0.000
#> lane4_3600STDY6184377_ATAGCTCT_L004_17480_1     3 0.000
#> lane4_3600STDY6184378_AGTCCAAC_L004_17480_1     3 0.000
#> lane4_3600STDY6184379_TTTGGGCA_L004_17480_1     3 0.000
#> lane4_3600STDY6184380_TCTGACGC_L004_17480_1     3 0.000
#> lane4_3600STDY6184381_TGTCGACT_L004_17480_1     3 0.000
#> lane4_3600STDY6184382_GTCACGTA_L004_17480_1     3 0.000
#> lane4_3600STDY6184383_TTGAGCGA_L004_17480_1     3 0.000
#> lane4_3600STDY6184384_GAGACATA_L004_17480_1     3 0.000
#> lane4_3600STDY6184385_GTCAAGCT_L004_17480_1     3 0.000
#> lane4_3600STDY6184386_AGCAAGTT_L004_17480_1     3 0.000
#> lane4_3600STDY6184387_GACGCTCA_L004_17480_1     3 0.000
#> lane4_3600STDY6184388_ACGGCAGC_L004_17480_1     3 1.000
#> lane4_3600STDY6184389_AGAACTGA_L004_17480_1     2 1.000
#> lane4_3600STDY6184390_CGCCTTTG_L004_17480_1     2 0.000
#> lane4_3600STDY6184391_TAAGGTCA_L004_17480_1     2 0.000
#> lane4_3600STDY6184392_ACGTTGGC_L004_17480_1     2 0.249
#> lane4_3600STDY6184393_CCAGCTTA_L004_17480_1     3 0.000
#> lane4_3600STDY6184394_GAATCCTA_L004_17480_1     3 0.000
#> lane4_3600STDY6184395_ACTTCGTA_L004_17480_1     3 0.000
#> lane4_3600STDY6184396_TAGTCGGT_L004_17480_1     3 0.000
#> lane4_3600STDY6184397_CGCACGAG_L004_17480_1     3 0.000
#> lane4_3600STDY6184398_ACGTACTA_L004_17480_1     3 0.000
#> lane4_3600STDY6184399_AGCGCCAA_L004_17480_1     3 0.000
#> lane4_3600STDY6184400_GCCTGCCC_L004_17480_1     3 0.000
#> lane4_3600STDY6184401_AGGACGAT_L004_17480_1     2 1.000
#> lane4_3600STDY6184402_CTTGACCG_L004_17480_1     3 0.000
#> lane4_3600STDY6184403_AGGTCTAA_L004_17480_1     2 0.751
#> lane4_3600STDY6184404_CGAGATCC_L004_17480_1     3 0.000
#> lane4_3600STDY6184405_ATTAGCGG_L004_17480_1     3 0.000
#> lane4_3600STDY6184406_GCGCTGAT_L004_17480_1     3 0.000
#> lane4_3600STDY6184407_TGCTGAAC_L004_17480_1     3 0.000
#> lane4_3600STDY6184408_GAGGGCAG_L004_17480_1     3 0.000
#> lane4_3600STDY6184409_GTTTTCAC_L004_17480_1     3 0.000
#> lane4_3600STDY6184410_GAGATGCC_L004_17480_1     3 0.000
#> lane4_3600STDY6184411_TTGAGAAG_L004_17480_1     3 0.000
#> lane4_3600STDY6184412_GCATCCGG_L004_17480_1     2 0.000
#> lane4_3600STDY6184413_GTCACCAG_L004_17480_1     2 0.000
#> lane4_3600STDY6184414_GAGGTCGC_L004_17480_1     2 0.000
#> lane4_3600STDY6184415_AAGGGGTA_L004_17480_1     2 1.000
#> lane4_3600STDY6184416_TTTTACGT_L004_17480_1     2 0.000
#> lane4_3600STDY6184417_TTCCTACA_L004_17480_1     3 0.000
#> lane4_3600STDY6184418_AGTGTAGT_L004_17480_1     2 1.000
#> lane4_3600STDY6184419_GTGGCCAA_L004_17480_1     2 1.000
#> lane4_3600STDY6184420_AAATACTC_L004_17480_1     3 0.000
#> lane4_3600STDY6184421_CACCCGTC_L004_17480_1     3 0.000
#> lane4_3600STDY6184422_TCGTGGTT_L004_17480_1     3 0.000
#> lane4_3600STDY6184423_ACTTGGGG_L004_17480_1     3 0.000
#> lane4_3600STDY6184424_GGCTGCTT_L004_17480_1     3 0.000
#> lane4_3600STDY6184425_CAGGGTCG_L004_17480_1     3 0.000
#> lane4_3600STDY6184426_CTCGTCGA_L004_17480_1     2 1.000
#> lane4_3600STDY6184427_TCTACAGT_L004_17480_1     3 0.000
#> lane4_3600STDY6184428_CTTCTAGA_L004_17480_1     3 0.000
#> lane4_3600STDY6184429_AACGGCTT_L004_17480_1     3 0.000
#> lane4_3600STDY6184430_ATAAGACT_L004_17480_1     3 0.000
#> lane4_3600STDY6184431_GTTTTTCG_L004_17480_1     3 0.000
#> lane4_3600STDY6184432_ATTGGTAT_L004_17480_1     3 0.000
#> lane4_3600STDY6184433_CGCCAGTA_L004_17480_1     2 0.000
#> lane4_3600STDY6184434_AAGCCGAA_L004_17480_1     3 0.000
#> lane4_3600STDY6184435_TGACCCAC_L004_17480_1     2 1.000
#> lane4_3600STDY6184436_ATTGCACA_L004_17480_1     3 0.000
#> lane4_3600STDY6184437_CTTTTGAT_L004_17480_1     2 0.249
#> lane4_3600STDY6184438_TAGCGAGA_L004_17480_1     2 0.000
#> lane4_3600STDY6184439_TTCGCAGG_L004_17480_1     2 0.000
#> lane4_3600STDY6184440_TAGTTATT_L004_17480_1     2 0.000
#> lane4_3600STDY6184441_TCCTCCGA_L004_17480_1     3 0.000
#> lane4_3600STDY6184442_GCGGGTCT_L004_17480_1     2 1.000
#> lane4_3600STDY6184443_GATTCTAT_L004_17480_1     3 0.000
#> lane4_3600STDY6184444_ATGCAAAG_L004_17480_1     3 0.000
#> lane4_3600STDY6184445_GTCTGAGG_L004_17480_1     2 0.000
#> lane4_3600STDY6184446_TCTGGCGA_L004_17480_1     2 1.000
#> lane4_3600STDY6184447_AATTTGCG_L004_17480_1     2 0.000
#> lane4_3600STDY6184448_TGGGTTGG_L004_17480_1     2 0.000
#> lane4_3600STDY6184449_AGTTGAAA_L004_17480_1     2 0.000
#> lane4_3600STDY6184450_GACCGGAA_L004_17480_1     2 0.000
#> lane4_3600STDY6184451_GATCGAAC_L004_17480_1     3 0.000
#> lane4_3600STDY6184452_GTATAGGG_L004_17480_1     3 0.000
#> lane4_3600STDY6184453_GGTAAGAG_L004_17480_1     3 0.000
#> lane4_3600STDY6184454_AGTCCGAT_L004_17480_1     3 0.000
#> lane4_3600STDY6184455_ATACAGGC_L004_17480_1     2 1.000
#> lane4_3600STDY6184456_TGAGACTC_L004_17480_1     2 0.000
#> lane4_3600STDY6184457_ACTCAGGA_L004_17480_1     2 1.000
#> lane4_3600STDY6184458_GTGTCTGA_L004_17480_1     3 0.000
#> lane4_3600STDY6184459_CTTGAATC_L004_17480_1     2 0.000
#> lane4_3600STDY6184460_CCGCATGA_L004_17480_1     2 0.000
#> lane4_3600STDY6184461_AAGTAACA_L004_17480_1     2 0.000
#> lane4_3600STDY6184462_GTGGTACT_L004_17480_1     2 0.000
#> lane4_3600STDY6184463_AGCTGTGC_L004_17480_1     2 0.000
#> lane4_3600STDY6184464_TTACCTTC_L004_17480_1     2 0.000
#> lane4_3600STDY6184465_TCCGGGTA_L004_17480_1     2 0.000
#> lane4_3600STDY6184466_CTACGTAA_L004_17480_1     2 0.000
#> lane4_3600STDY6184467_TCGGACCG_L004_17480_1     2 0.000
#> lane4_3600STDY6184468_ATGCGTCG_L004_17480_1     3 0.000
#> lane4_3600STDY6184469_TTCTTAGC_L004_17480_1     3 0.000
#> lane4_3600STDY6184470_TGAGTAAG_L004_17480_1     3 0.000
#> lane4_3600STDY6184471_AAGTGATA_L004_17480_1     2 0.751
#> lane4_3600STDY6184472_TCGATGCG_L004_17480_1     3 0.000
#> lane4_3600STDY6184473_TATTCTGG_L004_17480_1     2 0.751
#> lane4_3600STDY6184474_AGCCGTGA_L004_17480_1     2 0.000
#> lane4_3600STDY6184475_AAGCCTTC_L004_17480_1     2 0.502
#> lane4_3600STDY6184476_AGGTATCC_L004_17480_1     3 0.000
#> lane4_3600STDY6184477_AGGATCTC_L004_17480_1     3 0.000
#> lane4_3600STDY6184478_CTGTTTGA_L004_17480_1     3 0.000
#> lane4_3600STDY6184479_GGAATTTC_L004_17480_1     3 0.000
#> lane4_3600STDY6184480_TTGGAGCA_L004_17480_1     2 1.000
#> lane4_3600STDY6184481_AAGGTCTG_L004_17480_1     3 0.000
#> lane4_3600STDY6184482_AATTAGGC_L004_17480_1     3 0.000
#> lane4_3600STDY6184483_AATCGGGT_L004_17480_1     2 1.000
#> lane4_3600STDY6184484_AGGTAGAC_L004_17480_1     2 0.000
#> lane4_3600STDY6184485_CTTATTCC_L004_17480_1     3 0.000
#> lane4_3600STDY6184486_CAGGCTCT_L004_17480_1     2 0.000
#> lane4_3600STDY6184487_AAAGCACG_L004_17480_1     2 0.000
#> lane4_3600STDY6184488_GTATACAC_L004_17480_1     2 0.000
#> lane4_3600STDY6184489_GGACATAT_L004_17480_1     2 0.000
#> lane4_3600STDY6184490_CGGTTGGG_L004_17480_1     2 0.000
#> lane4_3600STDY6184491_GTCCGTGA_L004_17480_1     2 1.000
#> lane4_3600STDY6184492_GCCGAACC_L004_17480_1     3 0.000
#> lane4_3600STDY6184493_ACTTTACT_L004_17480_1     3 0.000
#> lane4_3600STDY6184494_GGGTCCAT_L004_17480_1     3 0.000
#> lane4_3600STDY6184495_ATAACTAG_L004_17480_1     3 0.000
#> lane4_3600STDY6184496_AATAGAGA_L004_17480_1     3 0.000
#> lane4_3600STDY6184497_TCACCATT_L004_17480_1     3 0.000
#> lane4_3600STDY6184498_CGCCTGAT_L004_17480_1     2 0.000
#> lane4_3600STDY6184499_GCGTGAAC_L004_17480_1     3 0.000
#> lane4_3600STDY6184500_TAAGGGTG_L004_17480_1     2 0.747
#> lane4_3600STDY6184501_GGTGTCGA_L004_17480_1     2 1.000
#> lane4_3600STDY6184502_CCGTTAGG_L004_17480_1     2 1.000
#> lane4_3600STDY6184503_TGGCAAAA_L004_17480_1     2 0.751
#> lane4_3600STDY6184504_CCTACCCG_L004_17480_1     2 0.000
#> lane4_3600STDY6184505_AACAGCGC_L004_17480_1     2 1.000
#> lane4_3600STDY6184506_TATACATC_L004_17480_1     3 0.000
#> lane4_3600STDY6184507_AAGCGACT_L004_17480_1     2 0.000
#> lane4_3600STDY6184508_GAAGCGCA_L004_17480_1     2 0.000
#> lane4_3600STDY6184509_ACCTCTAC_L004_17480_1     2 0.000
#> lane4_3600STDY6184510_GATTGCGT_L004_17480_1     2 0.000
#> lane4_3600STDY6184511_GCTGGTTG_L004_17480_1     2 0.000
#> lane4_3600STDY6184512_ATCGTCCT_L004_17480_1     2 0.000
#> lane4_3600STDY6184513_GGACACGG_L004_17480_1     3 0.000
#> lane4_3600STDY6184514_CGCACCTA_L004_17480_1     2 0.000
#> lane4_3600STDY6184515_CTTCGGCT_L004_17480_1     2 0.747
#> lane4_3600STDY6184516_CGAATCGA_L004_17480_1     3 0.000
#> lane4_3600STDY6184517_TAACAACT_L004_17480_1     3 0.000
#> lane4_3600STDY6184518_AGCTCTTT_L004_17480_1     3 0.000
#> lane4_3600STDY6184519_TAATCCCT_L004_17480_1     3 0.000
#> lane4_3600STDY6184520_AGGACACT_L004_17480_1     3 0.000
#> lane4_3600STDY6184521_TTACACTA_L004_17480_1     3 0.000
#> lane4_3600STDY6184522_AAACATCA_L004_17480_1     2 1.000
#> lane4_3600STDY6184523_CCATAGCT_L004_17480_1     2 1.000
#> lane4_3600STDY6184524_GTTATGGC_L004_17480_1     2 0.249
#> lane4_3600STDY6184525_ATCCCCTA_L004_17480_1     3 0.000
#> lane4_3600STDY6184526_CATACTAC_L004_17480_1     3 0.000
#> lane4_3600STDY6184527_CAATTGTT_L004_17480_1     3 0.000
#> lane4_3600STDY6184528_AAACCCGT_L004_17480_1     3 0.000
#> lane4_3600STDY6184529_CAGATTTC_L004_17480_1     3 0.000
#> lane4_3600STDY6184530_GCGTAGGT_L004_17480_1     3 0.000
#> lane4_3600STDY6184531_GGCATTCG_L004_17480_1     3 0.000
#> lane4_3600STDY6184532_TGGGGCTT_L004_17480_1     3 0.000
#> lane4_3600STDY6184533_CTGACTAC_L004_17480_1     2 1.000
#> lane4_3600STDY6184534_AACTTTTA_L004_17480_1     2 0.249
#> lane4_3600STDY6184535_AGGGATTC_L004_17480_1     2 0.000
#> lane4_3600STDY6184536_CCGAGTAG_L004_17480_1     2 1.000
#> lane4_3600STDY6184537_GGGGACTA_L004_17480_1     3 0.000
#> lane4_3600STDY6184538_GGAGTTGA_L004_17480_1     2 1.000
#> lane4_3600STDY6184539_AGCTCATC_L004_17480_1     2 1.000
#> lane4_3600STDY6184540_TAATCAAC_L004_17480_1     3 0.000
#> lane4_3600STDY6184541_ACTGGTCG_L004_17480_1     3 1.000
#> lane4_3600STDY6184542_GACGATTG_L004_17480_1     2 0.502
#> lane4_3600STDY6184543_AGCGATGA_L004_17480_1     2 0.751
#> lane4_3600STDY6184544_GAAGAGAT_L004_17480_1     2 1.000
#> lane4_3600STDY6184545_CGTATGCA_L004_17480_1     2 0.000
#> lane4_3600STDY6184546_CACGTGCG_L004_17480_1     3 1.000
#> lane4_3600STDY6184547_GCTTAAAC_L004_17480_1     3 0.000
#> lane4_3600STDY6184548_GTTCCGCA_L004_17480_1     2 0.000
#> lane4_3600STDY6184549_GTATCGTC_L004_17480_1     3 0.000
#> lane4_3600STDY6184550_GTCCTCAC_L004_17480_1     3 0.000
#> lane4_3600STDY6184551_GTACGGAC_L004_17480_1     2 0.000
#> lane4_3600STDY6184552_CATTTTGC_L004_17480_1     2 0.000
#> lane4_3600STDY6184553_TCCTCTCT_L004_17480_1     2 1.000
#> lane4_3600STDY6184554_AGCAACGA_L004_17480_1     3 0.000
#> lane4_3600STDY6184555_ACAGAAGA_L004_17480_1     2 1.000
#> lane4_3600STDY6184556_CGACCCTT_L004_17480_1     3 0.000
#> lane4_3600STDY6184557_CTGCCTAG_L004_17480_1     3 0.502
#> lane4_3600STDY6184558_GAGCGCAT_L004_17480_1     2 0.000
#> lane4_3600STDY6184559_AACTTATC_L004_17480_1     3 0.000
#> lane4_3600STDY6184560_CCGATGTA_L004_17480_1     2 0.000
#> lane4_3600STDY6184561_TTACTACC_L004_17480_1     3 0.000
#> lane4_3600STDY6184562_CAAGGAGC_L004_17480_1     2 0.000
#> lane4_3600STDY6184563_TGGTTGAC_L004_17480_1     2 0.000
#> lane4_3600STDY6184564_ACCTGCTG_L004_17480_1     2 0.000
#> lane1_3600STDY6183797_ATCACGTT_L001_17592_1     2 0.000
#> lane1_3600STDY6183798_CGATGTTT_L001_17592_1     3 0.000
#> lane1_3600STDY6183799_TTAGGCAT_L001_17592_1     3 0.000
#> lane1_3600STDY6183800_TGACCACT_L001_17592_1     3 0.000
#> lane1_3600STDY6183801_ACAGTGGT_L001_17592_1     3 0.000
#> lane1_3600STDY6183802_GCCAATGT_L001_17592_1     3 0.000
#> lane1_3600STDY6183803_CAGATCTG_L001_17592_1     3 0.000
#> lane1_3600STDY6183804_ACTTGATG_L001_17592_1     3 0.000
#> lane1_3600STDY6183805_GATCAGCG_L001_17592_1     3 0.000
#> lane1_3600STDY6183806_TAGCTTGT_L001_17592_1     3 0.000
#> lane1_3600STDY6183807_GGCTACAG_L001_17592_1     3 0.000
#> lane1_3600STDY6183808_CTTGTACT_L001_17592_1     2 0.000
#> lane1_3600STDY6183809_TGGTTGTT_L001_17592_1     3 0.000
#> lane1_3600STDY6183810_TCTCGGTT_L001_17592_1     2 0.000
#> lane1_3600STDY6183811_TAAGCGTT_L001_17592_1     3 0.000
#> lane1_3600STDY6183812_TCCGTCTT_L001_17592_1     3 0.000
#> lane1_3600STDY6183813_TGTACCTT_L001_17592_1     3 0.000
#> lane1_3600STDY6183814_TTCTGTGT_L001_17592_1     3 0.000
#> lane1_3600STDY6183815_TCTGCTGT_L001_17592_1     3 0.000
#> lane1_3600STDY6183816_TTGGAGGT_L001_17592_1     2 0.000
#> lane1_3600STDY6183817_TCGAGCGT_L001_17592_1     3 0.000
#> lane1_3600STDY6183818_TGATACGT_L001_17592_1     3 0.000
#> lane1_3600STDY6183819_TGCATAGT_L001_17592_1     3 0.000
#> lane1_3600STDY6183820_TTGACTCT_L001_17592_1     2 0.000
#> lane1_3600STDY6183821_TGCGATCT_L001_17592_1     3 0.000
#> lane1_3600STDY6183822_TTCCTGCT_L001_17592_1     3 0.000
#> lane1_3600STDY6183823_TAGTGACT_L001_17592_1     3 0.000
#> lane1_3600STDY6183824_TACAGGAT_L001_17592_1     3 0.000
#> lane1_3600STDY6183825_TCCTCAAT_L001_17592_1     3 0.000
#> lane1_3600STDY6183826_TGTGGTTG_L001_17592_1     3 0.000
#> lane1_3600STDY6183827_TAGTCTTG_L001_17592_1     3 0.000
#> lane1_3600STDY6183828_TTCCATTG_L001_17592_1     3 0.000
#> lane1_3600STDY6183829_TCGAAGTG_L001_17592_1     3 0.000
#> lane1_3600STDY6183830_TAACGCTG_L001_17592_1     3 0.000
#> lane1_3600STDY6183831_TTGGTATG_L001_17592_1     3 0.000
#> lane1_3600STDY6183832_TGAACTGG_L001_17592_1     3 0.000
#> lane1_3600STDY6183833_TACTTCGG_L001_17592_1     3 0.000
#> lane1_3600STDY6183834_TCTCACGG_L001_17592_1     3 0.000
#> lane1_3600STDY6183835_TCAGGAGG_L001_17592_1     3 0.000
#> lane1_3600STDY6183836_TAAGTTCG_L001_17592_1     3 0.000
#> lane1_3600STDY6183837_TCCAGTCG_L001_17592_1     3 0.000
#> lane1_3600STDY6183838_TGTATGCG_L001_17592_1     3 0.000
#> lane1_3600STDY6183839_TCATTGAG_L001_17592_1     2 1.000
#> lane1_3600STDY6183840_TGGCTCAG_L001_17592_1     3 0.000
#> lane1_3600STDY6183841_TATGCCAG_L001_17592_1     3 0.751
#> lane1_3600STDY6183842_TCAGATTC_L001_17592_1     3 0.000
#> lane1_3600STDY6183843_TACTAGTC_L001_17592_1     3 0.000
#> lane1_3600STDY6183844_TTCAGCTC_L001_17592_1     3 0.000
#> lane1_3600STDY6183845_TGTCTATC_L001_17592_1     3 0.000
#> lane1_3600STDY6183846_TATGTGGC_L001_17592_1     3 0.000
#> lane1_3600STDY6183847_TTACTCGC_L001_17592_1     3 0.000
#> lane1_3600STDY6183848_TCGTTAGC_L001_17592_1     3 0.000
#> lane1_3600STDY6183849_TACCGAGC_L001_17592_1     3 0.000
#> lane1_3600STDY6183850_TGTTCTCC_L001_17592_1     3 0.000
#> lane1_3600STDY6183851_TTCGCACC_L001_17592_1     3 0.000
#> lane1_3600STDY6183852_TTGCGTAC_L001_17592_1     3 0.000
#> lane1_3600STDY6183853_TCTACGAC_L001_17592_1     3 0.000
#> lane1_3600STDY6183854_TGACAGAC_L001_17592_1     3 0.000
#> lane1_3600STDY6183855_TAGAACAC_L001_17592_1     3 0.000
#> lane1_3600STDY6183856_TCATCCTA_L001_17592_1     3 0.000
#> lane1_3600STDY6183857_TGCTGATA_L001_17592_1     2 1.000
#> lane1_3600STDY6183858_TAGACGGA_L001_17592_1     3 0.000
#> lane1_3600STDY6183859_TGTGAAGA_L001_17592_1     3 0.000
#> lane1_3600STDY6183860_TCTCTTCA_L001_17592_1     3 0.000
#> lane1_3600STDY6183861_TTGTTCCA_L001_17592_1     3 0.000
#> lane1_3600STDY6183862_TGAAGCCA_L001_17592_1     3 0.000
#> lane1_3600STDY6183863_TACCACCA_L001_17592_1     3 0.000
#> lane1_3600STDY6183864_TGCGTGAA_L001_17592_1     2 0.000
#> lane1_3600STDY6183865_GGTGAGTT_L001_17592_1     2 0.502
#> lane1_3600STDY6183866_GATCTCTT_L001_17592_1     3 0.000
#> lane1_3600STDY6183867_GTGTCCTT_L001_17592_1     3 0.000
#> lane1_3600STDY6183868_GACGGATT_L001_17592_1     3 0.000
#> lane1_3600STDY6183869_GCAACATT_L001_17592_1     3 0.000
#> lane1_3600STDY6183870_GGTCGTGT_L001_17592_1     3 0.000
#> lane1_3600STDY6183871_GAATCTGT_L001_17592_1     3 0.000
#> lane1_3600STDY6183872_GTACATCT_L001_17592_1     3 0.000
#> lane1_3600STDY6183873_GAGGTGCT_L001_17592_1     3 0.000
#> lane1_3600STDY6183874_GCATGGCT_L001_17592_1     2 0.249
#> lane1_3600STDY6183875_GTTAGCCT_L001_17592_1     3 0.000
#> lane1_3600STDY6183876_GTCGCTAT_L001_17592_1     3 0.000
#> lane1_3600STDY6183877_GGAATGAT_L001_17592_1     3 0.000
#> lane1_3600STDY6183878_GAGCCAAT_L001_17592_1     3 0.000
#> lane1_3600STDY6183879_GCTCCTTG_L001_17592_1     3 0.000
#> lane1_3600STDY6183880_GTAAGGTG_L001_17592_1     3 0.000
#> lane1_3600STDY6183881_GAGGATGG_L001_17592_1     2 0.000
#> lane1_3600STDY6183882_GTTGTCGG_L001_17592_1     3 0.249
#> lane1_3600STDY6183883_GGATTAGG_L001_17592_1     3 0.000
#> lane1_3600STDY6183884_GATAGAGG_L001_17592_1     3 0.000
#> lane1_3600STDY6183885_GTGTGTCG_L001_17592_1     2 0.000
#> lane1_3600STDY6183886_GCAATCCG_L001_17592_1     2 0.000
#> lane1_3600STDY6183887_GACCTTAG_L001_17592_1     2 0.000
#> lane1_3600STDY6183888_GCCTGTTC_L001_17592_1     2 0.000
#> lane1_3600STDY6183889_GCACTGTC_L001_17592_1     2 0.000
#> lane1_3600STDY6183890_GCTAACTC_L001_17592_1     3 0.000
#> lane1_3600STDY6183891_GATTCATC_L001_17592_1     3 0.000
#> lane1_3600STDY6183892_GTCTTGGC_L001_17592_1     3 0.000
#> lane1_3600STDY6183893_GTAGAAGC_L001_17592_1     3 0.000
#> lane1_3600STDY6183894_GATGGTCC_L001_17592_1     3 0.000
#> lane1_3600STDY6183895_GTGCTACC_L001_17592_1     3 0.000
#> lane1_3600STDY6183896_GCGATTAC_L001_17592_1     3 0.000
#> lane1_3600STDY6183897_GGTTGGAC_L001_17592_1     3 0.000
#> lane1_3600STDY6183898_GGCACAAC_L001_17592_1     3 1.000
#> lane1_3600STDY6183899_GACACTTA_L001_17592_1     3 0.000
#> lane1_3600STDY6183900_GTGCAGTA_L001_17592_1     3 0.000
#> lane1_3600STDY6183901_GGAGTCTA_L001_17592_1     3 0.000
#> lane1_3600STDY6183902_GCTATGGA_L001_17592_1     3 0.000
#> lane1_3600STDY6183903_GAGTGCGA_L001_17592_1     3 0.000
#> lane1_3600STDY6183904_GTAACCGA_L001_17592_1     3 0.000
#> lane1_3600STDY6183905_GGCAAGCA_L001_17592_1     2 0.000
#> lane1_3600STDY6183906_GCCTTACA_L001_17592_1     3 0.000
#> lane1_3600STDY6183907_GAACGACA_L001_17592_1     3 0.000
#> lane1_3600STDY6183908_GCAGGTAA_L001_17592_1     2 0.751
#> lane1_3600STDY6183909_GCGTCGAA_L001_17592_1     2 0.000
#> lane1_3600STDY6183910_CGTTCGGT_L001_17592_1     2 0.000
#> lane1_3600STDY6183911_CACCAGGT_L001_17592_1     2 0.000
#> lane1_3600STDY6183912_CTGCGAGT_L001_17592_1     2 0.000
#> lane1_3600STDY6183913_CCGTATCT_L001_17592_1     2 0.000
#> lane1_3600STDY6183914_CGCTTCCT_L001_17592_1     2 0.747
#> lane1_3600STDY6183915_CAAGACCT_L001_17592_1     3 0.000
#> lane1_3600STDY6183916_CACACACT_L001_17592_1     3 0.000
#> lane1_3600STDY6183917_CCTAGTAT_L001_17592_1     3 0.000
#> lane1_3600STDY6183918_CCACCGAT_L001_17592_1     3 0.000
#> lane1_3600STDY6183919_CTTCACAT_L001_17592_1     3 0.000
#> lane1_3600STDY6183920_CTATCATG_L001_17592_1     3 0.000
#> lane1_3600STDY6183921_CATGAATG_L001_17592_1     3 0.000
#> lane1_3600STDY6183922_CCACTTGG_L001_17592_1     3 0.000
#> lane1_3600STDY6183923_CTGTACGG_L001_17592_1     3 0.000
#> lane1_3600STDY6183924_CTAGATAG_L001_17592_1     3 0.000
#> lane1_3600STDY6183925_CACTCGAG_L001_17592_1     3 0.000
#> lane1_3600STDY6183926_CCGACAAG_L001_17592_1     3 0.000
#> lane1_3600STDY6183927_CTTGCTTC_L001_17592_1     2 0.000
#> lane1_3600STDY6183928_CATAGGTC_L001_17592_1     2 1.000
#> lane1_3600STDY6183929_CACATTGC_L001_17592_1     3 0.000
#> lane1_3600STDY6183930_CGCTAAGC_L001_17592_1     3 0.000
#> lane1_3600STDY6183931_CAACCTCC_L001_17592_1     3 0.000
#> lane1_3600STDY6183932_CAGCTGAC_L001_17592_1     2 0.498
#> lane1_3600STDY6183933_CTCAAGAC_L001_17592_1     2 0.249
#> lane1_3600STDY6183934_CGTGTCAC_L001_17592_1     2 0.000
#> lane1_3600STDY6183935_CCATGCAC_L001_17592_1     3 0.000
#> lane1_3600STDY6183936_CGTTACTA_L001_17592_1     3 0.000
#> lane1_3600STDY6183937_CAAGTAGA_L001_17592_1     3 0.000
#> lane1_3600STDY6183938_CTCTCTCA_L001_17592_1     3 0.000
#> lane1_3600STDY6183939_CGACTGCA_L001_17592_1     3 0.000
#> lane1_3600STDY6183940_CCTGAGCA_L001_17592_1     3 0.000
#> lane1_3600STDY6183941_CAGGCTAA_L001_17592_1     3 0.000
#> lane1_3600STDY6183942_CGGAGGAA_L001_17592_1     3 0.000
#> lane1_3600STDY6183943_AGGAGATT_L001_17592_1     3 0.000
#> lane1_3600STDY6183944_AGGCAGCT_L001_17592_1     2 1.000
#> lane1_3600STDY6183945_ACGTTCAT_L001_17592_1     3 0.000
#> lane1_3600STDY6183946_AACGTGTG_L001_17592_1     3 0.000
#> lane1_3600STDY6183947_AGACCGTG_L001_17592_1     3 0.000
#> lane1_3600STDY6183948_ACCTCTGG_L001_17592_1     3 0.000
#> lane1_3600STDY6183949_ATCCTAGG_L001_17592_1     3 0.000
#> lane1_3600STDY6183950_ATCAACCG_L001_17592_1     3 0.000
#> lane1_3600STDY6183951_AGGTCACG_L001_17592_1     3 0.000
#> lane1_3600STDY6183952_ACTGTTAG_L001_17592_1     2 0.000
#> lane1_3600STDY6183953_AAGAGTAG_L001_17592_1     2 1.000
#> lane1_3600STDY6183954_ATTCGGAG_L001_17592_1     3 0.000
#> lane1_3600STDY6183955_ACGCAATC_L001_17592_1     3 0.000
#> lane1_3600STDY6183956_ACAAGTGC_L001_17592_1     2 0.751
#> lane1_3600STDY6183957_ATGGATCC_L001_17592_1     2 1.000
#> lane1_3600STDY6183958_AGAGGACC_L001_17592_1     2 1.000
#> lane1_3600STDY6183959_ATCTCCAC_L001_17592_1     2 1.000
#> lane1_3600STDY6183960_ATTGGCTA_L001_17592_1     2 1.000
#> lane1_3600STDY6183961_AATCCTGA_L001_17592_1     3 0.000
#> lane1_3600STDY6183962_AGGATTCA_L001_17592_1     3 0.000
#> lane1_3600STDY6183963_AACTGGCA_L001_17592_1     3 0.000
#> lane1_3600STDY6183964_ACAACGCA_L001_17592_1     2 0.000
#> lane1_3600STDY6183965_CGGAAACA_L001_17592_1     2 0.000
#> lane1_3600STDY6183966_AATGAATT_L001_17592_1     3 0.000
#> lane1_3600STDY6183967_TAGGACCC_L001_17592_1     3 0.000
#> lane1_3600STDY6183968_TCTCAGTG_L001_17592_1     3 0.000
#> lane1_3600STDY6183969_CATGGGAA_L001_17592_1     3 0.000
#> lane1_3600STDY6183970_CCTAAGAT_L001_17592_1     2 1.000
#> lane1_3600STDY6183971_CTCAGATA_L001_17592_1     3 0.000
#> lane1_3600STDY6183972_CCCATAGG_L001_17592_1     3 0.000
#> lane1_3600STDY6183973_GCTATGAC_L001_17592_1     3 0.000
#> lane1_3600STDY6183974_GCTGTGAA_L001_17592_1     3 0.000
#> lane1_3600STDY6183975_ACCTTCAA_L001_17592_1     2 1.000
#> lane1_3600STDY6183976_ACAAAGCC_L001_17592_1     2 1.000
#> lane1_3600STDY6183977_CAAAACCG_L001_17592_1     2 0.000
#> lane1_3600STDY6183978_GCTGGACA_L001_17592_1     2 1.000
#> lane1_3600STDY6183979_AAGTCGTA_L001_17592_1     2 0.751
#> lane1_3600STDY6183980_CATCCGTA_L001_17592_1     3 0.000
#> lane1_3600STDY6183981_TTGTGTCT_L001_17592_1     2 0.502
#> lane1_3600STDY6183982_TGCTCTAG_L001_17592_1     2 0.000
#> lane1_3600STDY6183983_ACCCAACA_L001_17592_1     2 0.000
#> lane1_3600STDY6183984_CGATCTGA_L001_17592_1     2 1.000
#> lane1_3600STDY6183985_GTTCCACG_L001_17592_1     3 0.000
#> lane1_3600STDY6183986_ACTCTTTC_L001_17592_1     2 0.498
#> lane1_3600STDY6183987_TATTGGAG_L001_17592_1     2 1.000
#> lane1_3600STDY6183988_TAAACATA_L001_17592_1     2 0.000
#> lane1_3600STDY6183989_GTAAGATA_L001_17592_1     2 0.000
#> lane1_3600STDY6183990_TACCGCAA_L001_17592_1     3 0.000
#> lane1_3600STDY6183991_TATCTCCT_L001_17592_1     3 0.000
#> lane1_3600STDY6183992_TGTCATCT_L001_17592_1     2 1.000
#> lane1_3600STDY6183993_ATAGCTCT_L001_17592_1     2 1.000
#> lane1_3600STDY6183994_AGTCCAAC_L001_17592_1     2 0.000
#> lane1_3600STDY6183995_TTTGGGCA_L001_17592_1     3 0.000
#> lane1_3600STDY6183996_TCTGACGC_L001_17592_1     2 0.000
#> lane1_3600STDY6183997_TGTCGACT_L001_17592_1     2 1.000
#> lane1_3600STDY6183998_GTCACGTA_L001_17592_1     2 1.000
#> lane1_3600STDY6183999_TTGAGCGA_L001_17592_1     2 1.000
#> lane1_3600STDY6184000_GAGACATA_L001_17592_1     3 0.000
#> lane1_3600STDY6184001_GTCAAGCT_L001_17592_1     2 0.000
#> lane1_3600STDY6184002_AGCAAGTT_L001_17592_1     3 0.000
#> lane1_3600STDY6184003_GACGCTCA_L001_17592_1     3 0.000
#> lane1_3600STDY6184004_ACGGCAGC_L001_17592_1     3 0.000
#> lane1_3600STDY6184005_AGAACTGA_L001_17592_1     3 0.000
#> lane1_3600STDY6184006_CGCCTTTG_L001_17592_1     3 0.000
#> lane1_3600STDY6184007_TAAGGTCA_L001_17592_1     3 0.000
#> lane1_3600STDY6184008_ACGTTGGC_L001_17592_1     3 0.000
#> lane1_3600STDY6184009_CCAGCTTA_L001_17592_1     3 0.000
#> lane1_3600STDY6184010_GAATCCTA_L001_17592_1     3 0.000
#> lane1_3600STDY6184011_ACTTCGTA_L001_17592_1     2 0.000
#> lane1_3600STDY6184012_TAGTCGGT_L001_17592_1     3 0.000
#> lane1_3600STDY6184013_CGCACGAG_L001_17592_1     3 0.000
#> lane1_3600STDY6184014_ACGTACTA_L001_17592_1     2 1.000
#> lane1_3600STDY6184015_AGCGCCAA_L001_17592_1     3 0.000
#> lane1_3600STDY6184016_GCCTGCCC_L001_17592_1     2 1.000
#> lane1_3600STDY6184017_AGGACGAT_L001_17592_1     3 0.000
#> lane1_3600STDY6184018_CTTGACCG_L001_17592_1     2 0.249
#> lane1_3600STDY6184019_AGGTCTAA_L001_17592_1     3 1.000
#> lane1_3600STDY6184020_CGAGATCC_L001_17592_1     3 1.000
#> lane1_3600STDY6184021_ATTAGCGG_L001_17592_1     3 0.000
#> lane1_3600STDY6184022_GCGCTGAT_L001_17592_1     2 0.253
#> lane1_3600STDY6184023_TGCTGAAC_L001_17592_1     2 0.000
#> lane1_3600STDY6184024_GAGGGCAG_L001_17592_1     3 0.000
#> lane1_3600STDY6184025_GTTTTCAC_L001_17592_1     3 0.000
#> lane1_3600STDY6184026_GAGATGCC_L001_17592_1     3 0.000
#> lane1_3600STDY6184027_TTGAGAAG_L001_17592_1     3 0.000
#> lane1_3600STDY6184028_GCATCCGG_L001_17592_1     3 0.000
#> lane1_3600STDY6184029_GTCACCAG_L001_17592_1     3 0.000
#> lane1_3600STDY6184030_GAGGTCGC_L001_17592_1     3 0.000
#> lane1_3600STDY6184031_AAGGGGTA_L001_17592_1     3 0.000
#> lane1_3600STDY6184032_TTTTACGT_L001_17592_1     3 0.000
#> lane1_3600STDY6184033_TTCCTACA_L001_17592_1     3 0.000
#> lane1_3600STDY6184034_AGTGTAGT_L001_17592_1     2 1.000
#> lane1_3600STDY6184035_GTGGCCAA_L001_17592_1     3 0.000
#> lane1_3600STDY6184036_AAATACTC_L001_17592_1     3 0.000
#> lane1_3600STDY6184037_CACCCGTC_L001_17592_1     3 0.000
#> lane1_3600STDY6184038_TCGTGGTT_L001_17592_1     3 0.000
#> lane1_3600STDY6184039_ACTTGGGG_L001_17592_1     2 1.000
#> lane1_3600STDY6184040_GGCTGCTT_L001_17592_1     2 1.000
#> lane1_3600STDY6184041_CAGGGTCG_L001_17592_1     3 0.000
#> lane1_3600STDY6184042_CTCGTCGA_L001_17592_1     3 0.000
#> lane1_3600STDY6184043_TCTACAGT_L001_17592_1     2 0.502
#> lane1_3600STDY6184044_CTTCTAGA_L001_17592_1     2 0.751
#> lane1_3600STDY6184045_AACGGCTT_L001_17592_1     3 0.000
#> lane1_3600STDY6184046_ATAAGACT_L001_17592_1     2 0.249
#> lane1_3600STDY6184047_GTTTTTCG_L001_17592_1     2 0.751
#> lane1_3600STDY6184048_ATTGGTAT_L001_17592_1     3 0.000
#> lane1_3600STDY6184049_CGCCAGTA_L001_17592_1     3 0.000
#> lane1_3600STDY6184050_AAGCCGAA_L001_17592_1     3 0.000
#> lane1_3600STDY6184051_TGACCCAC_L001_17592_1     2 0.751
#> lane1_3600STDY6184052_ATTGCACA_L001_17592_1     3 0.000
#> lane1_3600STDY6184053_CTTTTGAT_L001_17592_1     3 0.000
#> lane1_3600STDY6184054_TAGCGAGA_L001_17592_1     3 0.000
#> lane1_3600STDY6184055_TTCGCAGG_L001_17592_1     3 0.000
#> lane1_3600STDY6184056_TAGTTATT_L001_17592_1     3 0.000
#> lane1_3600STDY6184057_TCCTCCGA_L001_17592_1     3 0.000
#> lane1_3600STDY6184058_GCGGGTCT_L001_17592_1     2 0.000
#> lane1_3600STDY6184059_GATTCTAT_L001_17592_1     3 0.000
#> lane1_3600STDY6184060_ATGCAAAG_L001_17592_1     3 0.000
#> lane1_3600STDY6184061_GTCTGAGG_L001_17592_1     2 0.747
#> lane1_3600STDY6184062_TCTGGCGA_L001_17592_1     2 0.498
#> lane1_3600STDY6184063_AATTTGCG_L001_17592_1     2 0.000
#> lane1_3600STDY6184064_TGGGTTGG_L001_17592_1     2 0.000
#> lane1_3600STDY6184065_AGTTGAAA_L001_17592_1     2 0.000
#> lane1_3600STDY6184066_GACCGGAA_L001_17592_1     2 0.000
#> lane1_3600STDY6184067_GATCGAAC_L001_17592_1     2 0.000
#> lane1_3600STDY6184068_GTATAGGG_L001_17592_1     2 0.000
#> lane1_3600STDY6184069_GGTAAGAG_L001_17592_1     3 0.000
#> lane1_3600STDY6184070_AGTCCGAT_L001_17592_1     2 0.000
#> lane1_3600STDY6184071_ATACAGGC_L001_17592_1     2 0.000
#> lane1_3600STDY6184072_TGAGACTC_L001_17592_1     3 0.000
#> lane1_3600STDY6184073_ACTCAGGA_L001_17592_1     3 0.000
#> lane1_3600STDY6184074_GTGTCTGA_L001_17592_1     3 0.000
#> lane1_3600STDY6184075_CTTGAATC_L001_17592_1     3 0.000
#> lane1_3600STDY6184076_CCGCATGA_L001_17592_1     3 0.000
#> lane1_3600STDY6184077_AAGTAACA_L001_17592_1     3 0.000
#> lane1_3600STDY6184078_GTGGTACT_L001_17592_1     2 0.000
#> lane1_3600STDY6184079_AGCTGTGC_L001_17592_1     2 0.000
#> lane1_3600STDY6184080_TTACCTTC_L001_17592_1     3 0.000
#> lane1_3600STDY6184081_TCCGGGTA_L001_17592_1     3 0.249
#> lane1_3600STDY6184082_CTACGTAA_L001_17592_1     2 0.000
#> lane1_3600STDY6184083_TCGGACCG_L001_17592_1     3 0.000
#> lane1_3600STDY6184084_ATGCGTCG_L001_17592_1     3 0.000
#> lane1_3600STDY6184085_TTCTTAGC_L001_17592_1     3 0.000
#> lane1_3600STDY6184086_TGAGTAAG_L001_17592_1     3 0.253
#> lane1_3600STDY6184087_AAGTGATA_L001_17592_1     2 0.751
#> lane1_3600STDY6184088_TCGATGCG_L001_17592_1     2 1.000
#> lane1_3600STDY6184089_TATTCTGG_L001_17592_1     2 0.000
#> lane1_3600STDY6184090_AGCCGTGA_L001_17592_1     2 0.000
#> lane1_3600STDY6184091_AAGCCTTC_L001_17592_1     2 0.751
#> lane1_3600STDY6184092_AGGTATCC_L001_17592_1     2 0.000
#> lane1_3600STDY6184093_AGGATCTC_L001_17592_1     3 0.000
#> lane1_3600STDY6184094_CTGTTTGA_L001_17592_1     2 0.000
#> lane1_3600STDY6184095_GGAATTTC_L001_17592_1     2 0.000
#> lane1_3600STDY6184096_TTGGAGCA_L001_17592_1     3 0.000
#> lane1_3600STDY6184097_AAGGTCTG_L001_17592_1     3 0.000
#> lane1_3600STDY6184098_AATTAGGC_L001_17592_1     3 0.000
#> lane1_3600STDY6184099_AATCGGGT_L001_17592_1     3 0.000
#> lane1_3600STDY6184100_AGGTAGAC_L001_17592_1     3 0.000
#> lane1_3600STDY6184101_CTTATTCC_L001_17592_1     3 0.000
#> lane1_3600STDY6184102_CAGGCTCT_L001_17592_1     2 0.000
#> lane1_3600STDY6184103_AAAGCACG_L001_17592_1     2 1.000
#> lane1_3600STDY6184104_GTATACAC_L001_17592_1     2 1.000
#> lane1_3600STDY6184105_GGACATAT_L001_17592_1     2 0.000
#> lane1_3600STDY6184106_CGGTTGGG_L001_17592_1     2 1.000
#> lane1_3600STDY6184107_GTCCGTGA_L001_17592_1     3 0.000
#> lane1_3600STDY6184108_GCCGAACC_L001_17592_1     3 0.000
#> lane1_3600STDY6184109_ACTTTACT_L001_17592_1     3 0.000
#> lane1_3600STDY6184110_GGGTCCAT_L001_17592_1     3 0.000
#> lane1_3600STDY6184111_ATAACTAG_L001_17592_1     2 1.000
#> lane1_3600STDY6184112_AATAGAGA_L001_17592_1     2 0.000
#> lane1_3600STDY6184113_TCACCATT_L001_17592_1     2 1.000
#> lane1_3600STDY6184114_CGCCTGAT_L001_17592_1     2 0.000
#> lane1_3600STDY6184115_GCGTGAAC_L001_17592_1     2 0.000
#> lane1_3600STDY6184116_TAAGGGTG_L001_17592_1     2 0.249
#> lane1_3600STDY6184117_GGTGTCGA_L001_17592_1     3 0.000
#> lane1_3600STDY6184118_CCGTTAGG_L001_17592_1     3 0.000
#> lane1_3600STDY6184119_TGGCAAAA_L001_17592_1     3 1.000
#> lane1_3600STDY6184120_CCTACCCG_L001_17592_1     3 0.000
#> lane1_3600STDY6184121_AACAGCGC_L001_17592_1     3 0.000
#> lane1_3600STDY6184122_TATACATC_L001_17592_1     3 0.000
#> lane1_3600STDY6184123_AAGCGACT_L001_17592_1     3 0.000
#> lane1_3600STDY6184124_GAAGCGCA_L001_17592_1     3 0.000
#> lane1_3600STDY6184125_ACCTCTAC_L001_17592_1     3 0.000
#> lane1_3600STDY6184126_GATTGCGT_L001_17592_1     2 0.249
#> lane1_3600STDY6184127_GCTGGTTG_L001_17592_1     3 0.000
#> lane1_3600STDY6184128_ATCGTCCT_L001_17592_1     3 0.000
#> lane1_3600STDY6184129_GGACACGG_L001_17592_1     3 0.000
#> lane1_3600STDY6184130_CGCACCTA_L001_17592_1     2 1.000
#> lane1_3600STDY6184131_CTTCGGCT_L001_17592_1     3 0.000
#> lane1_3600STDY6184132_CGAATCGA_L001_17592_1     2 0.000
#> lane1_3600STDY6184133_TAACAACT_L001_17592_1     3 0.000
#> lane1_3600STDY6184134_AGCTCTTT_L001_17592_1     3 1.000
#> lane1_3600STDY6184135_TAATCCCT_L001_17592_1     3 0.000
#> lane1_3600STDY6184136_AGGACACT_L001_17592_1     2 0.000
#> lane1_3600STDY6184137_TTACACTA_L001_17592_1     3 0.000
#> lane1_3600STDY6184138_AAACATCA_L001_17592_1     2 0.000
#> lane1_3600STDY6184139_CCATAGCT_L001_17592_1     3 0.000
#> lane1_3600STDY6184140_GTTATGGC_L001_17592_1     2 0.249
#> lane1_3600STDY6184141_ATCCCCTA_L001_17592_1     2 0.000
#> lane1_3600STDY6184142_CATACTAC_L001_17592_1     3 0.000
#> lane1_3600STDY6184143_CAATTGTT_L001_17592_1     2 1.000
#> lane1_3600STDY6184144_AAACCCGT_L001_17592_1     2 1.000
#> lane1_3600STDY6184145_CAGATTTC_L001_17592_1     3 0.000
#> lane1_3600STDY6184146_GCGTAGGT_L001_17592_1     3 0.000
#> lane1_3600STDY6184147_GGCATTCG_L001_17592_1     3 0.000
#> lane1_3600STDY6184148_TGGGGCTT_L001_17592_1     3 0.000
#> lane1_3600STDY6184149_CTGACTAC_L001_17592_1     3 0.000
#> lane1_3600STDY6184150_AACTTTTA_L001_17592_1     3 0.000
#> lane1_3600STDY6184151_AGGGATTC_L001_17592_1     2 1.000
#> lane1_3600STDY6184152_CCGAGTAG_L001_17592_1     3 0.000
#> lane1_3600STDY6184153_GGGGACTA_L001_17592_1     3 0.000
#> lane1_3600STDY6184154_GGAGTTGA_L001_17592_1     2 1.000
#> lane1_3600STDY6184155_AGCTCATC_L001_17592_1     3 0.000
#> lane1_3600STDY6184156_TAATCAAC_L001_17592_1     2 0.000
#> lane1_3600STDY6184157_ACTGGTCG_L001_17592_1     3 0.000
#> lane1_3600STDY6184158_GACGATTG_L001_17592_1     2 1.000
#> lane1_3600STDY6184159_AGCGATGA_L001_17592_1     3 0.000
#> lane1_3600STDY6184160_GAAGAGAT_L001_17592_1     2 1.000
#> lane1_3600STDY6184161_CGTATGCA_L001_17592_1     3 0.000
#> lane1_3600STDY6184162_CACGTGCG_L001_17592_1     3 0.000
#> lane1_3600STDY6184163_GCTTAAAC_L001_17592_1     2 1.000
#> lane1_3600STDY6184164_GTTCCGCA_L001_17592_1     2 1.000
#> lane1_3600STDY6184165_GTATCGTC_L001_17592_1     3 0.000
#> lane1_3600STDY6184166_GTCCTCAC_L001_17592_1     3 0.000
#> lane1_3600STDY6184167_GTACGGAC_L001_17592_1     2 0.751
#> lane1_3600STDY6184168_CATTTTGC_L001_17592_1     3 0.000
#> lane1_3600STDY6184169_TCCTCTCT_L001_17592_1     3 0.000
#> lane1_3600STDY6184170_AGCAACGA_L001_17592_1     2 1.000
#> lane1_3600STDY6184171_ACAGAAGA_L001_17592_1     3 0.000
#> lane1_3600STDY6184172_CGACCCTT_L001_17592_1     3 0.000
#> lane1_3600STDY6184173_CTGCCTAG_L001_17592_1     3 0.000
#> lane1_3600STDY6184174_GAGCGCAT_L001_17592_1     3 0.000
#> lane1_3600STDY6184175_AACTTATC_L001_17592_1     3 0.000
#> lane1_3600STDY6184176_CCGATGTA_L001_17592_1     3 0.000
#> lane1_3600STDY6184177_TTACTACC_L001_17592_1     3 0.000
#> lane1_3600STDY6184178_CAAGGAGC_L001_17592_1     3 0.000
#> lane1_3600STDY6184179_TGGTTGAC_L001_17592_1     3 0.000
#> lane1_3600STDY6184180_ACCTGCTG_L001_17592_1     2 0.000

Heatmaps for the consensus matrix. It visualizes the probability of two samples to be in a same group.

consensus_heatmap(res, k = 2)

plot of chunk tab-node-0-consensus-heatmap-1

consensus_heatmap(res, k = 3)

plot of chunk tab-node-0-consensus-heatmap-2

consensus_heatmap(res, k = 4)

plot of chunk tab-node-0-consensus-heatmap-3

Heatmaps for the membership of samples in all partitions to see how consistent they are:

membership_heatmap(res, k = 2)

plot of chunk tab-node-0-membership-heatmap-1

membership_heatmap(res, k = 3)

plot of chunk tab-node-0-membership-heatmap-2

membership_heatmap(res, k = 4)

plot of chunk tab-node-0-membership-heatmap-3

As soon as the classes for columns are determined, the signatures that are significantly different between subgroups can be looked for. Following are the heatmaps for signatures.

Signature heatmaps where rows are scaled:

get_signatures(res, k = 2)

plot of chunk tab-node-0-get-signatures-1

get_signatures(res, k = 3)

plot of chunk tab-node-0-get-signatures-2

get_signatures(res, k = 4)

plot of chunk tab-node-0-get-signatures-3

Signature heatmaps where rows are not scaled:

get_signatures(res, k = 2, scale_rows = FALSE)

plot of chunk tab-node-0-get-signatures-no-scale-1

get_signatures(res, k = 3, scale_rows = FALSE)

plot of chunk tab-node-0-get-signatures-no-scale-2

get_signatures(res, k = 4, scale_rows = FALSE)

plot of chunk tab-node-0-get-signatures-no-scale-3

Compare the overlap of signatures from different k:

compare_signatures(res)

plot of chunk node-0-signature_compare

get_signature() returns a data frame invisibly. To get the list of signatures, the function call should be assigned to a variable explicitly. In following code, if plot argument is set to FALSE, no heatmap is plotted while only the differential analysis is performed.

# code only for demonstration
tb = get_signature(res, k = ..., plot = FALSE)

An example of the output of tb is:

#>   which_row         fdr    mean_1    mean_2 scaled_mean_1 scaled_mean_2 km
#> 1        38 0.042760348  8.373488  9.131774    -0.5533452     0.5164555  1
#> 2        40 0.018707592  7.106213  8.469186    -0.6173731     0.5762149  1
#> 3        55 0.019134737 10.221463 11.207825    -0.6159697     0.5749050  1
#> 4        59 0.006059896  5.921854  7.869574    -0.6899429     0.6439467  1
#> 5        60 0.018055526  8.928898 10.211722    -0.6204761     0.5791110  1
#> 6        98 0.009384629 15.714769 14.887706     0.6635654    -0.6193277  2
...

The columns in tb are:

  1. which_row: row indices corresponding to the input matrix.
  2. fdr: FDR for the differential test.
  3. mean_x: The mean value in group x.
  4. scaled_mean_x: The mean value in group x after rows are scaled.
  5. km: Row groups if k-means clustering is applied to rows (which is done by automatically selecting number of clusters).

If there are too many signatures, top_signatures = ... can be set to only show the signatures with the highest FDRs:

# code only for demonstration
# e.g. to show the top 500 most significant rows
tb = get_signature(res, k = ..., top_signatures = 500)

If the signatures are defined as these which are uniquely high in current group, diff_method argument can be set to "uniquely_high_in_one_group":

# code only for demonstration
tb = get_signature(res, k = ..., diff_method = "uniquely_high_in_one_group")

UMAP plot which shows how samples are separated.

dimension_reduction(res, k = 2, method = "UMAP")

plot of chunk tab-node-0-dimension-reduction-1

dimension_reduction(res, k = 3, method = "UMAP")

plot of chunk tab-node-0-dimension-reduction-2

dimension_reduction(res, k = 4, method = "UMAP")

plot of chunk tab-node-0-dimension-reduction-3

Following heatmap shows how subgroups are split when increasing k:

collect_classes(res)

plot of chunk node-0-collect-classes

Test correlation between subgroups and known annotations. If the known annotation is numeric, one-way ANOVA test is applied, and if the known annotation is discrete, chi-squared contingency table test is applied.

test_to_known_factors(res)
#>             n_sample phenotype(p-value) k
#> ATC:skmeans      913          5.61e-124 2
#> ATC:skmeans     1016          1.18e-186 3
#> ATC:skmeans     1064          3.03e-154 4

If matrix rows can be associated to genes, consider to use functional_enrichment(res, ...) to perform function enrichment for the signature genes. See this vignette for more detailed explanations.


Node01

Parent node: Node0. Child nodes: Node011 , Node012 , Node013-leaf , Node014-leaf , Node021 , Node022 , Node023 , Node031 , Node032-leaf , Node033-leaf , Node034 .

The object with results only for a single top-value method and a single partitioning method can be extracted as:

res = res_rh["01"]

A summary of res and all the functions that can be applied to it:

res
#> A 'ConsensusPartition' object with k = 2, 3, 4.
#>   On a matrix with 16747 rows and 491 columns.
#>   Top rows (1675) are extracted by 'ATC' method.
#>   Subgroups are detected by 'skmeans' method.
#>   Performed in total 150 partitions by row resampling.
#>   Best k for subgroups seems to be 4.
#> 
#> Following methods can be applied to this 'ConsensusPartition' object:
#>  [1] "cola_report"             "collect_classes"         "collect_plots"          
#>  [4] "collect_stats"           "colnames"                "compare_partitions"     
#>  [7] "compare_signatures"      "consensus_heatmap"       "dimension_reduction"    
#> [10] "functional_enrichment"   "get_anno_col"            "get_anno"               
#> [13] "get_classes"             "get_consensus"           "get_matrix"             
#> [16] "get_membership"          "get_param"               "get_signatures"         
#> [19] "get_stats"               "is_best_k"               "is_stable_k"            
#> [22] "membership_heatmap"      "ncol"                    "nrow"                   
#> [25] "plot_ecdf"               "predict_classes"         "rownames"               
#> [28] "select_partition_number" "show"                    "suggest_best_k"         
#> [31] "test_to_known_factors"   "top_rows_heatmap"

collect_plots() function collects all the plots made from res for all k (number of subgroups) into one single page to provide an easy and fast comparison between different k.

collect_plots(res)

plot of chunk node-01-collect-plots

The plots are:

All the plots in panels can be made by individual functions and they are plotted later in this section.

select_partition_number() produces several plots showing different statistics for choosing “optimized” k. There are following statistics:

The detailed explanations of these statistics can be found in the cola vignette.

Generally speaking, higher 1-PAC score, higher mean silhouette score or higher concordance corresponds to better partition. Rand index and Jaccard index measure how similar the current partition is compared to partition with k-1. If they are too similar, we won't accept k is better than k-1.

select_partition_number(res)

plot of chunk node-01-select-partition-number

The numeric values for all these statistics can be obtained by get_stats().

get_stats(res)
#>   k 1-PAC mean_silhouette concordance area_increased  Rand Jaccard
#> 2 2  1.00           1.000       1.000          0.474 0.526   0.526
#> 3 3  0.96           0.944       0.977          0.256 0.881   0.776
#> 4 4  1.00           0.986       0.991          0.108 0.902   0.771

suggest_best_k() suggests the best \(k\) based on these statistics. The rules are as follows:

suggest_best_k(res)
#> [1] 4
#> attr(,"optional")
#> [1] 2 3

There is also optional best \(k\) = 2 3 that is worth to check.

Following is the table of the partitions (You need to click the show/hide code output link to see it). The membership matrix (columns with name p*) is inferred by clue::cl_consensus() function with the SE method. Basically the value in the membership matrix represents the probability to belong to a certain group. The finall subgroup label for an item is determined with the group with highest probability it belongs to.

In get_classes() function, the entropy is calculated from the membership matrix and the silhouette score is calculated from the consensus matrix.

show/hide code output

cbind(get_classes(res, k = 2), get_membership(res, k = 2))
#>                                             class entropy silhouette   p1   p2
#> lane1_3600STDY6077866_TTAGGCAT_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077867_TGACCACT_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077868_ACAGTGGT_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077869_GCCAATGT_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077870_CAGATCTG_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077871_ACTTGATG_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077872_GATCAGCG_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077873_TAGCTTGT_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077874_GGCTACAG_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077875_CTTGTACT_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077876_TGGTTGTT_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077877_TCTCGGTT_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077878_TAAGCGTT_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077879_TCCGTCTT_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077880_TGTACCTT_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077881_TTCTGTGT_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077882_TCTGCTGT_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077884_TCGAGCGT_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077885_TGATACGT_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077886_TGCATAGT_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077887_TTGACTCT_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077888_TGCGATCT_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077889_TTCCTGCT_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077890_TAGTGACT_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077891_TACAGGAT_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077892_TCCTCAAT_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077893_TGTGGTTG_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077894_TAGTCTTG_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077895_TTCCATTG_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077896_TCGAAGTG_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077897_TAACGCTG_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077898_TTGGTATG_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077900_TACTTCGG_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077901_TCTCACGG_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077902_TCAGGAGG_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077903_TAAGTTCG_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077905_TGTATGCG_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077906_TCATTGAG_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077907_TGGCTCAG_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077908_TATGCCAG_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077909_TCAGATTC_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077910_TACTAGTC_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077912_TGTCTATC_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077913_TATGTGGC_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077915_TCGTTAGC_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077916_TACCGAGC_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077917_TGTTCTCC_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077918_TTCGCACC_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077919_TTGCGTAC_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077920_TCTACGAC_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077921_TGACAGAC_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077922_TAGAACAC_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077923_TCATCCTA_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077924_TGCTGATA_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077925_TAGACGGA_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077926_TGTGAAGA_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077927_TCTCTTCA_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077928_TTGTTCCA_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077929_TGAAGCCA_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077930_TACCACCA_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077931_TGCGTGAA_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077932_GGTGAGTT_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077935_GACGGATT_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077936_GCAACATT_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077937_GGTCGTGT_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077938_GAATCTGT_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077939_GTACATCT_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077940_GAGGTGCT_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077941_GCATGGCT_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077942_GTTAGCCT_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077943_GTCGCTAT_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077944_GGAATGAT_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077945_GAGCCAAT_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077946_GCTCCTTG_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077947_GTAAGGTG_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077948_GAGGATGG_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077949_GTTGTCGG_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077950_GGATTAGG_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077951_GATAGAGG_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077952_GTGTGTCG_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077953_GCAATCCG_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077954_GACCTTAG_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077955_GCCTGTTC_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077956_GCACTGTC_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077957_GCTAACTC_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077958_GATTCATC_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077959_GTCTTGGC_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6077962_TTAGGCAT_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6077963_TGACCACT_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6077964_ACAGTGGT_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6077965_GCCAATGT_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6077966_CAGATCTG_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6077967_ACTTGATG_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6077968_GATCAGCG_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6077969_TAGCTTGT_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6077970_GGCTACAG_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6077971_CTTGTACT_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6077972_TGGTTGTT_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6077973_TCTCGGTT_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6077974_TAAGCGTT_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6077975_TCCGTCTT_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6077976_TGTACCTT_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6077977_TTCTGTGT_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6077979_TTGGAGGT_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6077980_TCGAGCGT_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6077981_TGATACGT_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6077982_TGCATAGT_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6077983_TTGACTCT_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6077984_TGCGATCT_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6077985_TTCCTGCT_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6077986_TAGTGACT_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6077987_TACAGGAT_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6077988_TCCTCAAT_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6077989_TGTGGTTG_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6077990_TAGTCTTG_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6077991_TTCCATTG_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6077992_TCGAAGTG_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6077993_TAACGCTG_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6077994_TTGGTATG_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6077995_TGAACTGG_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6077996_TACTTCGG_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6077998_TCAGGAGG_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6077999_TAAGTTCG_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078000_TCCAGTCG_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078003_TGGCTCAG_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078004_TATGCCAG_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078005_TCAGATTC_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078006_TACTAGTC_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078007_TTCAGCTC_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078008_TGTCTATC_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078009_TATGTGGC_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078010_TTACTCGC_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078011_TCGTTAGC_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078012_TACCGAGC_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078013_TGTTCTCC_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078014_TTCGCACC_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078015_TTGCGTAC_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078016_TCTACGAC_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078017_TGACAGAC_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078018_TAGAACAC_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078019_TCATCCTA_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078020_TGCTGATA_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078021_TAGACGGA_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078022_TGTGAAGA_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078023_TCTCTTCA_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078024_TTGTTCCA_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078025_TGAAGCCA_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078026_TACCACCA_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078028_GGTGAGTT_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078029_GATCTCTT_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078030_GTGTCCTT_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078031_GACGGATT_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078032_GCAACATT_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078033_GGTCGTGT_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078034_GAATCTGT_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078035_GTACATCT_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078036_GAGGTGCT_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078037_GCATGGCT_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078038_GTTAGCCT_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078039_GTCGCTAT_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078040_GGAATGAT_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078041_GAGCCAAT_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078042_GCTCCTTG_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078043_GTAAGGTG_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078044_GAGGATGG_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078045_GTTGTCGG_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078046_GGATTAGG_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078047_GATAGAGG_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078048_GTGTGTCG_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078049_GCAATCCG_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078050_GACCTTAG_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078051_GCCTGTTC_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078052_GCACTGTC_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078053_GCTAACTC_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078054_GATTCATC_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane3_3600STDY6078055_GTCTTGGC_L003_15987_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6167693_ATCACGTT_L001_17236_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6167694_CGATGTTT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167696_TGACCACT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167698_GCCAATGT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167699_CAGATCTG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167701_GATCAGCG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167702_TAGCTTGT_L001_17236_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6167703_GGCTACAG_L001_17236_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6167705_TGGTTGTT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167708_TCCGTCTT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167709_TGTACCTT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167711_TCTGCTGT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167712_TTGGAGGT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167713_TCGAGCGT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167714_TGATACGT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167715_TGCATAGT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167716_TTGACTCT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167717_TGCGATCT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167722_TGTGGTTG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167723_TAGTCTTG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167725_TCGAAGTG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167726_TAACGCTG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167727_TTGGTATG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167728_TGAACTGG_L001_17236_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6167729_TACTTCGG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167730_TCTCACGG_L001_17236_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6167731_TCAGGAGG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167732_TAAGTTCG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167733_TCCAGTCG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167735_TCATTGAG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167736_TGGCTCAG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167737_TATGCCAG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167738_TCAGATTC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167739_TACTAGTC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167740_TTCAGCTC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167741_TGTCTATC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167742_TATGTGGC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167743_TTACTCGC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167744_TCGTTAGC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167746_TGTTCTCC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167748_TTGCGTAC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167749_TCTACGAC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167750_TGACAGAC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167751_TAGAACAC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167752_TCATCCTA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167753_TGCTGATA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167754_TAGACGGA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167755_TGTGAAGA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167756_TCTCTTCA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167757_TTGTTCCA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167759_TACCACCA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167760_TGCGTGAA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167761_GGTGAGTT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167762_GATCTCTT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167763_GTGTCCTT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167764_GACGGATT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167765_GCAACATT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167766_GGTCGTGT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167767_GAATCTGT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167768_GTACATCT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167769_GAGGTGCT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167770_GCATGGCT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167771_GTTAGCCT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167772_GTCGCTAT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167773_GGAATGAT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167774_GAGCCAAT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167775_GCTCCTTG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167777_GAGGATGG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167779_GGATTAGG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167780_GATAGAGG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167781_GTGTGTCG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167782_GCAATCCG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167783_GACCTTAG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167784_GCCTGTTC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167785_GCACTGTC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167786_GCTAACTC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167787_GATTCATC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167789_GTAGAAGC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167790_GATGGTCC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167791_GTGCTACC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167792_GCGATTAC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167793_GGTTGGAC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167794_GGCACAAC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167795_GACACTTA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167796_GTGCAGTA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167797_GGAGTCTA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167798_GCTATGGA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167800_GTAACCGA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167801_GGCAAGCA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167802_GCCTTACA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167803_GAACGACA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167804_GCAGGTAA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167805_GCGTCGAA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167806_CGTTCGGT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167807_CACCAGGT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167808_CTGCGAGT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167809_CCGTATCT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167811_CAAGACCT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167812_CACACACT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167814_CCACCGAT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167815_CTTCACAT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167816_CTATCATG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167818_CCACTTGG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167819_CTGTACGG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167820_CTAGATAG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167822_CCGACAAG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167823_CTTGCTTC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167824_CATAGGTC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167825_CACATTGC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167826_CGCTAAGC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167827_CAACCTCC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167828_CAGCTGAC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167829_CTCAAGAC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167830_CGTGTCAC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167831_CCATGCAC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167832_CGTTACTA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167833_CAAGTAGA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167834_CTCTCTCA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167835_CGACTGCA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167836_CCTGAGCA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167837_CAGGCTAA_L001_17236_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6167838_CGGAGGAA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167839_AGGAGATT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167840_AGGCAGCT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167842_AACGTGTG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167845_ATCCTAGG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167846_ATCAACCG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167848_ACTGTTAG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167849_AAGAGTAG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167850_ATTCGGAG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167851_ACGCAATC_L001_17236_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6167852_ACAAGTGC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167853_ATGGATCC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167854_AGAGGACC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167855_ATCTCCAC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167856_ATTGGCTA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167859_AACTGGCA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167860_ACAACGCA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167862_AATGAATT_L001_17236_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6167863_TAGGACCC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167864_TCTCAGTG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167865_CATGGGAA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167866_CCTAAGAT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167867_CTCAGATA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167868_CCCATAGG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167869_GCTATGAC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167874_GCTGGACA_L001_17236_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6167875_AAGTCGTA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167876_CATCCGTA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167877_TTGTGTCT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167878_TGCTCTAG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167880_CGATCTGA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167881_GTTCCACG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167882_ACTCTTTC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167886_TACCGCAA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167888_TGTCATCT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167889_ATAGCTCT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167890_AGTCCAAC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167891_TTTGGGCA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167892_TCTGACGC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167893_TGTCGACT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167894_GTCACGTA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167895_TTGAGCGA_L001_17236_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6167896_GAGACATA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167899_GACGCTCA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167902_CGCCTTTG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167903_TAAGGTCA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167904_ACGTTGGC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167905_CCAGCTTA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167906_GAATCCTA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167907_ACTTCGTA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167909_CGCACGAG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167910_ACGTACTA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167911_AGCGCCAA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167912_GCCTGCCC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167913_AGGACGAT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167914_CTTGACCG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167915_AGGTCTAA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167916_CGAGATCC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167917_ATTAGCGG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167919_TGCTGAAC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167921_GTTTTCAC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167922_GAGATGCC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167923_TTGAGAAG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167924_GCATCCGG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167925_GTCACCAG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167927_AAGGGGTA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167928_TTTTACGT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167929_TTCCTACA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167930_AGTGTAGT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167931_GTGGCCAA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167932_AAATACTC_L001_17236_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6167933_CACCCGTC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167934_TCGTGGTT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167935_ACTTGGGG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167936_GGCTGCTT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167937_CAGGGTCG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167938_CTCGTCGA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167939_TCTACAGT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167941_AACGGCTT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167942_ATAAGACT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167943_GTTTTTCG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167944_ATTGGTAT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167945_CGCCAGTA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167946_AAGCCGAA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167947_TGACCCAC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167948_ATTGCACA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167949_CTTTTGAT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167951_TTCGCAGG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167952_TAGTTATT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167953_TCCTCCGA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167954_GCGGGTCT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167955_GATTCTAT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167956_ATGCAAAG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167957_GTCTGAGG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167958_TCTGGCGA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167959_AATTTGCG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167961_AGTTGAAA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167962_GACCGGAA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167963_GATCGAAC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167964_GTATAGGG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167966_AGTCCGAT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167967_ATACAGGC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167968_TGAGACTC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167969_ACTCAGGA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167971_CTTGAATC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167972_CCGCATGA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167973_AAGTAACA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167974_GTGGTACT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167975_AGCTGTGC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167976_TTACCTTC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167977_TCCGGGTA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167978_CTACGTAA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167979_TCGGACCG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167980_ATGCGTCG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167981_TTCTTAGC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167982_TGAGTAAG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167983_AAGTGATA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167984_TCGATGCG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167985_TATTCTGG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167986_AGCCGTGA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167987_AAGCCTTC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167988_AGGTATCC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167990_CTGTTTGA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167991_GGAATTTC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167994_AATTAGGC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167995_AATCGGGT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167996_AGGTAGAC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167997_CTTATTCC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167998_CAGGCTCT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6167999_AAAGCACG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168000_GTATACAC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168001_GGACATAT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168002_CGGTTGGG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168003_GTCCGTGA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168004_GCCGAACC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168006_GGGTCCAT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168007_ATAACTAG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168008_AATAGAGA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168009_TCACCATT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168010_CGCCTGAT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168011_GCGTGAAC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168012_TAAGGGTG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168013_GGTGTCGA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168014_CCGTTAGG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168015_TGGCAAAA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168017_AACAGCGC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168019_AAGCGACT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168020_GAAGCGCA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168021_ACCTCTAC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168022_GATTGCGT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168024_ATCGTCCT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168025_GGACACGG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168026_CGCACCTA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168027_CTTCGGCT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168028_CGAATCGA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168029_TAACAACT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168030_AGCTCTTT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168031_TAATCCCT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168033_TTACACTA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168034_AAACATCA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168035_CCATAGCT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168036_GTTATGGC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168037_ATCCCCTA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168038_CATACTAC_L001_17236_1     1   0.242      0.958 0.96 0.04
#> lane1_3600STDY6168039_CAATTGTT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168041_CAGATTTC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168042_GCGTAGGT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168043_GGCATTCG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168044_TGGGGCTT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168045_CTGACTAC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168047_AGGGATTC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168048_CCGAGTAG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168049_GGGGACTA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168050_GGAGTTGA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168051_AGCTCATC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168052_TAATCAAC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168053_ACTGGTCG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168054_GACGATTG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168055_AGCGATGA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168057_CGTATGCA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168058_CACGTGCG_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168059_GCTTAAAC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168060_GTTCCGCA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168061_GTATCGTC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168062_GTCCTCAC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168065_TCCTCTCT_L001_17236_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6168066_AGCAACGA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168067_ACAGAAGA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168068_CGACCCTT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168070_GAGCGCAT_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168071_AACTTATC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168072_CCGATGTA_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168073_TTACTACC_L001_17236_1     1   0.000      1.000 1.00 0.00
#> lane1_3600STDY6168074_CAAGGAGC_L001_17236_1     1   0.000      1.000 1.00 0.00

show/hide code output

cbind(get_classes(res, k = 3), get_membership(res, k = 3))
#>                                             class entropy silhouette   p1   p2   p3
#> lane1_3600STDY6077866_TTAGGCAT_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077867_TGACCACT_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077868_ACAGTGGT_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077869_GCCAATGT_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077870_CAGATCTG_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077871_ACTTGATG_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077872_GATCAGCG_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077873_TAGCTTGT_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077874_GGCTACAG_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077875_CTTGTACT_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077876_TGGTTGTT_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077877_TCTCGGTT_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077878_TAAGCGTT_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077879_TCCGTCTT_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077880_TGTACCTT_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077881_TTCTGTGT_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077882_TCTGCTGT_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077884_TCGAGCGT_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077885_TGATACGT_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077886_TGCATAGT_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077887_TTGACTCT_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077888_TGCGATCT_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077889_TTCCTGCT_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077890_TAGTGACT_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077891_TACAGGAT_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077892_TCCTCAAT_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077893_TGTGGTTG_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077894_TAGTCTTG_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077895_TTCCATTG_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077896_TCGAAGTG_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077897_TAACGCTG_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077898_TTGGTATG_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077900_TACTTCGG_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077901_TCTCACGG_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077902_TCAGGAGG_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077903_TAAGTTCG_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077905_TGTATGCG_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077906_TCATTGAG_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077907_TGGCTCAG_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077908_TATGCCAG_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077909_TCAGATTC_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077910_TACTAGTC_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077912_TGTCTATC_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077913_TATGTGGC_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077915_TCGTTAGC_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077916_TACCGAGC_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077917_TGTTCTCC_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077918_TTCGCACC_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077919_TTGCGTAC_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077920_TCTACGAC_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077921_TGACAGAC_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077922_TAGAACAC_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077923_TCATCCTA_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077924_TGCTGATA_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077925_TAGACGGA_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077926_TGTGAAGA_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077927_TCTCTTCA_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077928_TTGTTCCA_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077929_TGAAGCCA_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077930_TACCACCA_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077931_TGCGTGAA_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077932_GGTGAGTT_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077935_GACGGATT_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077936_GCAACATT_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077937_GGTCGTGT_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077938_GAATCTGT_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077939_GTACATCT_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077940_GAGGTGCT_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077941_GCATGGCT_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077942_GTTAGCCT_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077943_GTCGCTAT_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077944_GGAATGAT_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077945_GAGCCAAT_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077946_GCTCCTTG_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077947_GTAAGGTG_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077948_GAGGATGG_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077949_GTTGTCGG_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077950_GGATTAGG_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077951_GATAGAGG_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077952_GTGTGTCG_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077953_GCAATCCG_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077954_GACCTTAG_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077955_GCCTGTTC_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077956_GCACTGTC_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077957_GCTAACTC_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077958_GATTCATC_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6077959_GTCTTGGC_L001_15986_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6077962_TTAGGCAT_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6077963_TGACCACT_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6077964_ACAGTGGT_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6077965_GCCAATGT_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6077966_CAGATCTG_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6077967_ACTTGATG_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6077968_GATCAGCG_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6077969_TAGCTTGT_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6077970_GGCTACAG_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6077971_CTTGTACT_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6077972_TGGTTGTT_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6077973_TCTCGGTT_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6077974_TAAGCGTT_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6077975_TCCGTCTT_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6077976_TGTACCTT_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6077977_TTCTGTGT_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6077979_TTGGAGGT_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6077980_TCGAGCGT_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6077981_TGATACGT_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6077982_TGCATAGT_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6077983_TTGACTCT_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6077984_TGCGATCT_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6077985_TTCCTGCT_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6077986_TAGTGACT_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6077987_TACAGGAT_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6077988_TCCTCAAT_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6077989_TGTGGTTG_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6077990_TAGTCTTG_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6077991_TTCCATTG_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6077992_TCGAAGTG_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6077993_TAACGCTG_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6077994_TTGGTATG_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6077995_TGAACTGG_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6077996_TACTTCGG_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6077998_TCAGGAGG_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6077999_TAAGTTCG_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078000_TCCAGTCG_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078003_TGGCTCAG_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078004_TATGCCAG_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078005_TCAGATTC_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078006_TACTAGTC_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078007_TTCAGCTC_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078008_TGTCTATC_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078009_TATGTGGC_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078010_TTACTCGC_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078011_TCGTTAGC_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078012_TACCGAGC_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078013_TGTTCTCC_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078014_TTCGCACC_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078015_TTGCGTAC_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078016_TCTACGAC_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078017_TGACAGAC_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078018_TAGAACAC_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078019_TCATCCTA_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078020_TGCTGATA_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078021_TAGACGGA_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078022_TGTGAAGA_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078023_TCTCTTCA_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078024_TTGTTCCA_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078025_TGAAGCCA_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078026_TACCACCA_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078028_GGTGAGTT_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078029_GATCTCTT_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078030_GTGTCCTT_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078031_GACGGATT_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078032_GCAACATT_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078033_GGTCGTGT_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078034_GAATCTGT_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078035_GTACATCT_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078036_GAGGTGCT_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078037_GCATGGCT_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078038_GTTAGCCT_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078039_GTCGCTAT_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078040_GGAATGAT_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078041_GAGCCAAT_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078042_GCTCCTTG_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078043_GTAAGGTG_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078044_GAGGATGG_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078045_GTTGTCGG_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078046_GGATTAGG_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078047_GATAGAGG_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078048_GTGTGTCG_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078049_GCAATCCG_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078050_GACCTTAG_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078051_GCCTGTTC_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078052_GCACTGTC_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078053_GCTAACTC_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078054_GATTCATC_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane3_3600STDY6078055_GTCTTGGC_L003_15987_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6167693_ATCACGTT_L001_17236_1     3   0.604     0.3649 0.00 0.38 0.62
#> lane1_3600STDY6167694_CGATGTTT_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6167696_TGACCACT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167698_GCCAATGT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167699_CAGATCTG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167701_GATCAGCG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167702_TAGCTTGT_L001_17236_1     3   0.207     0.9047 0.00 0.06 0.94
#> lane1_3600STDY6167703_GGCTACAG_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6167705_TGGTTGTT_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6167708_TCCGTCTT_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6167709_TGTACCTT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167711_TCTGCTGT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167712_TTGGAGGT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167713_TCGAGCGT_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6167714_TGATACGT_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6167715_TGCATAGT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167716_TTGACTCT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167717_TGCGATCT_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6167722_TGTGGTTG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167723_TAGTCTTG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167725_TCGAAGTG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167726_TAACGCTG_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6167727_TTGGTATG_L001_17236_1     3   0.254     0.8813 0.08 0.00 0.92
#> lane1_3600STDY6167728_TGAACTGG_L001_17236_1     2   0.000     1.0000 0.00 1.00 0.00
#> lane1_3600STDY6167729_TACTTCGG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167730_TCTCACGG_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6167731_TCAGGAGG_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6167732_TAAGTTCG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167733_TCCAGTCG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167735_TCATTGAG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167736_TGGCTCAG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167737_TATGCCAG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167738_TCAGATTC_L001_17236_1     1   0.556     0.5995 0.70 0.00 0.30
#> lane1_3600STDY6167739_TACTAGTC_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6167740_TTCAGCTC_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6167741_TGTCTATC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167742_TATGTGGC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167743_TTACTCGC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167744_TCGTTAGC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167746_TGTTCTCC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167748_TTGCGTAC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167749_TCTACGAC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167750_TGACAGAC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167751_TAGAACAC_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6167752_TCATCCTA_L001_17236_1     1   0.556     0.5995 0.70 0.00 0.30
#> lane1_3600STDY6167753_TGCTGATA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167754_TAGACGGA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167755_TGTGAAGA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167756_TCTCTTCA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167757_TTGTTCCA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167759_TACCACCA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167760_TGCGTGAA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167761_GGTGAGTT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167762_GATCTCTT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167763_GTGTCCTT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167764_GACGGATT_L001_17236_1     1   0.604     0.4397 0.62 0.00 0.38
#> lane1_3600STDY6167765_GCAACATT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167766_GGTCGTGT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167767_GAATCTGT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167768_GTACATCT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167769_GAGGTGCT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167770_GCATGGCT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167771_GTTAGCCT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167772_GTCGCTAT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167773_GGAATGAT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167774_GAGCCAAT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167775_GCTCCTTG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167777_GAGGATGG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167779_GGATTAGG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167780_GATAGAGG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167781_GTGTGTCG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167782_GCAATCCG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167783_GACCTTAG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167784_GCCTGTTC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167785_GCACTGTC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167786_GCTAACTC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167787_GATTCATC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167789_GTAGAAGC_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6167790_GATGGTCC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167791_GTGCTACC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167792_GCGATTAC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167793_GGTTGGAC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167794_GGCACAAC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167795_GACACTTA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167796_GTGCAGTA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167797_GGAGTCTA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167798_GCTATGGA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167800_GTAACCGA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167801_GGCAAGCA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167802_GCCTTACA_L001_17236_1     1   0.556     0.5995 0.70 0.00 0.30
#> lane1_3600STDY6167803_GAACGACA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167804_GCAGGTAA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167805_GCGTCGAA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167806_CGTTCGGT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167807_CACCAGGT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167808_CTGCGAGT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167809_CCGTATCT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167811_CAAGACCT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167812_CACACACT_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6167814_CCACCGAT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167815_CTTCACAT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167816_CTATCATG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167818_CCACTTGG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167819_CTGTACGG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167820_CTAGATAG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167822_CCGACAAG_L001_17236_1     3   0.595     0.3772 0.36 0.00 0.64
#> lane1_3600STDY6167823_CTTGCTTC_L001_17236_1     1   0.595     0.4839 0.64 0.00 0.36
#> lane1_3600STDY6167824_CATAGGTC_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6167825_CACATTGC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167826_CGCTAAGC_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6167827_CAACCTCC_L001_17236_1     1   0.604     0.4397 0.62 0.00 0.38
#> lane1_3600STDY6167828_CAGCTGAC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167829_CTCAAGAC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167830_CGTGTCAC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167831_CCATGCAC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167832_CGTTACTA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167833_CAAGTAGA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167834_CTCTCTCA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167835_CGACTGCA_L001_17236_1     1   0.556     0.5995 0.70 0.00 0.30
#> lane1_3600STDY6167836_CCTGAGCA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167837_CAGGCTAA_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6167838_CGGAGGAA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167839_AGGAGATT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167840_AGGCAGCT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167842_AACGTGTG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167845_ATCCTAGG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167846_ATCAACCG_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6167848_ACTGTTAG_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6167849_AAGAGTAG_L001_17236_1     1   0.604     0.4397 0.62 0.00 0.38
#> lane1_3600STDY6167850_ATTCGGAG_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6167851_ACGCAATC_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6167852_ACAAGTGC_L001_17236_1     1   0.604     0.4397 0.62 0.00 0.38
#> lane1_3600STDY6167853_ATGGATCC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167854_AGAGGACC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167855_ATCTCCAC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167856_ATTGGCTA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167859_AACTGGCA_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6167860_ACAACGCA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167862_AATGAATT_L001_17236_1     3   0.480     0.6936 0.00 0.22 0.78
#> lane1_3600STDY6167863_TAGGACCC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167864_TCTCAGTG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167865_CATGGGAA_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6167866_CCTAAGAT_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6167867_CTCAGATA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167868_CCCATAGG_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6167869_GCTATGAC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167874_GCTGGACA_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6167875_AAGTCGTA_L001_17236_1     1   0.556     0.5995 0.70 0.00 0.30
#> lane1_3600STDY6167876_CATCCGTA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167877_TTGTGTCT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167878_TGCTCTAG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167880_CGATCTGA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167881_GTTCCACG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167882_ACTCTTTC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167886_TACCGCAA_L001_17236_1     1   0.556     0.5995 0.70 0.00 0.30
#> lane1_3600STDY6167888_TGTCATCT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167889_ATAGCTCT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167890_AGTCCAAC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167891_TTTGGGCA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167892_TCTGACGC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167893_TGTCGACT_L001_17236_1     1   0.556     0.6000 0.70 0.00 0.30
#> lane1_3600STDY6167894_GTCACGTA_L001_17236_1     1   0.522     0.6629 0.74 0.00 0.26
#> lane1_3600STDY6167895_TTGAGCGA_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6167896_GAGACATA_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6167899_GACGCTCA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167902_CGCCTTTG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167903_TAAGGTCA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167904_ACGTTGGC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167905_CCAGCTTA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167906_GAATCCTA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167907_ACTTCGTA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167909_CGCACGAG_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6167910_ACGTACTA_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6167911_AGCGCCAA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167912_GCCTGCCC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167913_AGGACGAT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167914_CTTGACCG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167915_AGGTCTAA_L001_17236_1     3   0.630    -0.0244 0.48 0.00 0.52
#> lane1_3600STDY6167916_CGAGATCC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167917_ATTAGCGG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167919_TGCTGAAC_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6167921_GTTTTCAC_L001_17236_1     1   0.604     0.4397 0.62 0.00 0.38
#> lane1_3600STDY6167922_GAGATGCC_L001_17236_1     1   0.540     0.6322 0.72 0.00 0.28
#> lane1_3600STDY6167923_TTGAGAAG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167924_GCATCCGG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167925_GTCACCAG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167927_AAGGGGTA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167928_TTTTACGT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167929_TTCCTACA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167930_AGTGTAGT_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6167931_GTGGCCAA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167932_AAATACTC_L001_17236_1     3   0.556     0.5469 0.00 0.30 0.70
#> lane1_3600STDY6167933_CACCCGTC_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6167934_TCGTGGTT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167935_ACTTGGGG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167936_GGCTGCTT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167937_CAGGGTCG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167938_CTCGTCGA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167939_TCTACAGT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167941_AACGGCTT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167942_ATAAGACT_L001_17236_1     1   0.556     0.5995 0.70 0.00 0.30
#> lane1_3600STDY6167943_GTTTTTCG_L001_17236_1     1   0.630     0.1541 0.52 0.00 0.48
#> lane1_3600STDY6167944_ATTGGTAT_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6167945_CGCCAGTA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167946_AAGCCGAA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167947_TGACCCAC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167948_ATTGCACA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167949_CTTTTGAT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167951_TTCGCAGG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167952_TAGTTATT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167953_TCCTCCGA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167954_GCGGGTCT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167955_GATTCTAT_L001_17236_1     1   0.604     0.4397 0.62 0.00 0.38
#> lane1_3600STDY6167956_ATGCAAAG_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6167957_GTCTGAGG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167958_TCTGGCGA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167959_AATTTGCG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167961_AGTTGAAA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167962_GACCGGAA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167963_GATCGAAC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167964_GTATAGGG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167966_AGTCCGAT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167967_ATACAGGC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167968_TGAGACTC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167969_ACTCAGGA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167971_CTTGAATC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167972_CCGCATGA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167973_AAGTAACA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167974_GTGGTACT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167975_AGCTGTGC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167976_TTACCTTC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167977_TCCGGGTA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167978_CTACGTAA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167979_TCGGACCG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167980_ATGCGTCG_L001_17236_1     1   0.556     0.5995 0.70 0.00 0.30
#> lane1_3600STDY6167981_TTCTTAGC_L001_17236_1     1   0.556     0.5995 0.70 0.00 0.30
#> lane1_3600STDY6167982_TGAGTAAG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167983_AAGTGATA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167984_TCGATGCG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167985_TATTCTGG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167986_AGCCGTGA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167987_AAGCCTTC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167988_AGGTATCC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167990_CTGTTTGA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167991_GGAATTTC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167994_AATTAGGC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167995_AATCGGGT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167996_AGGTAGAC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167997_CTTATTCC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167998_CAGGCTCT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6167999_AAAGCACG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6168000_GTATACAC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6168001_GGACATAT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6168002_CGGTTGGG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6168003_GTCCGTGA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6168004_GCCGAACC_L001_17236_1     1   0.595     0.4839 0.64 0.00 0.36
#> lane1_3600STDY6168006_GGGTCCAT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6168007_ATAACTAG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6168008_AATAGAGA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6168009_TCACCATT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6168010_CGCCTGAT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6168011_GCGTGAAC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6168012_TAAGGGTG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6168013_GGTGTCGA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6168014_CCGTTAGG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6168015_TGGCAAAA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6168017_AACAGCGC_L001_17236_1     1   0.604     0.4397 0.62 0.00 0.38
#> lane1_3600STDY6168019_AAGCGACT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6168020_GAAGCGCA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6168021_ACCTCTAC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6168022_GATTGCGT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6168024_ATCGTCCT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6168025_GGACACGG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6168026_CGCACCTA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6168027_CTTCGGCT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6168028_CGAATCGA_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6168029_TAACAACT_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6168030_AGCTCTTT_L001_17236_1     1   0.571     0.5635 0.68 0.00 0.32
#> lane1_3600STDY6168031_TAATCCCT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6168033_TTACACTA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6168034_AAACATCA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6168035_CCATAGCT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6168036_GTTATGGC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6168037_ATCCCCTA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6168038_CATACTAC_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6168039_CAATTGTT_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6168041_CAGATTTC_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6168042_GCGTAGGT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6168043_GGCATTCG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6168044_TGGGGCTT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6168045_CTGACTAC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6168047_AGGGATTC_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6168048_CCGAGTAG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6168049_GGGGACTA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6168050_GGAGTTGA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6168051_AGCTCATC_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6168052_TAATCAAC_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6168053_ACTGGTCG_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6168054_GACGATTG_L001_17236_1     1   0.604     0.4397 0.62 0.00 0.38
#> lane1_3600STDY6168055_AGCGATGA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6168057_CGTATGCA_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6168058_CACGTGCG_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6168059_GCTTAAAC_L001_17236_1     1   0.619     0.3390 0.58 0.00 0.42
#> lane1_3600STDY6168060_GTTCCGCA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6168061_GTATCGTC_L001_17236_1     1   0.556     0.5995 0.70 0.00 0.30
#> lane1_3600STDY6168062_GTCCTCAC_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6168065_TCCTCTCT_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6168066_AGCAACGA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6168067_ACAGAAGA_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6168068_CGACCCTT_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6168070_GAGCGCAT_L001_17236_1     1   0.556     0.5995 0.70 0.00 0.30
#> lane1_3600STDY6168071_AACTTATC_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00
#> lane1_3600STDY6168072_CCGATGTA_L001_17236_1     1   0.000     0.9614 1.00 0.00 0.00
#> lane1_3600STDY6168073_TTACTACC_L001_17236_1     1   0.556     0.5995 0.70 0.00 0.30
#> lane1_3600STDY6168074_CAAGGAGC_L001_17236_1     3   0.000     0.9629 0.00 0.00 1.00

show/hide code output

cbind(get_classes(res, k = 4), get_membership(res, k = 4))
#>                                             class entropy silhouette   p1   p2   p3   p4
#> lane1_3600STDY6077866_TTAGGCAT_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077867_TGACCACT_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077868_ACAGTGGT_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077869_GCCAATGT_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077870_CAGATCTG_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077871_ACTTGATG_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077872_GATCAGCG_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077873_TAGCTTGT_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077874_GGCTACAG_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077875_CTTGTACT_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077876_TGGTTGTT_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077877_TCTCGGTT_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077878_TAAGCGTT_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077879_TCCGTCTT_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077880_TGTACCTT_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077881_TTCTGTGT_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077882_TCTGCTGT_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077884_TCGAGCGT_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077885_TGATACGT_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077886_TGCATAGT_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077887_TTGACTCT_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077888_TGCGATCT_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077889_TTCCTGCT_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077890_TAGTGACT_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077891_TACAGGAT_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077892_TCCTCAAT_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077893_TGTGGTTG_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077894_TAGTCTTG_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077895_TTCCATTG_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077896_TCGAAGTG_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077897_TAACGCTG_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077898_TTGGTATG_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077900_TACTTCGG_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077901_TCTCACGG_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077902_TCAGGAGG_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077903_TAAGTTCG_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077905_TGTATGCG_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077906_TCATTGAG_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077907_TGGCTCAG_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077908_TATGCCAG_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077909_TCAGATTC_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077910_TACTAGTC_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077912_TGTCTATC_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077913_TATGTGGC_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077915_TCGTTAGC_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077916_TACCGAGC_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077917_TGTTCTCC_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077918_TTCGCACC_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077919_TTGCGTAC_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077920_TCTACGAC_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077921_TGACAGAC_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077922_TAGAACAC_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077923_TCATCCTA_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077924_TGCTGATA_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077925_TAGACGGA_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077926_TGTGAAGA_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077927_TCTCTTCA_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077928_TTGTTCCA_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077929_TGAAGCCA_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077930_TACCACCA_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077931_TGCGTGAA_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077932_GGTGAGTT_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077935_GACGGATT_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077936_GCAACATT_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077937_GGTCGTGT_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077938_GAATCTGT_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077939_GTACATCT_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077940_GAGGTGCT_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077941_GCATGGCT_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077942_GTTAGCCT_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077943_GTCGCTAT_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077944_GGAATGAT_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077945_GAGCCAAT_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077946_GCTCCTTG_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077947_GTAAGGTG_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077948_GAGGATGG_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077949_GTTGTCGG_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077950_GGATTAGG_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077951_GATAGAGG_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077952_GTGTGTCG_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077953_GCAATCCG_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077954_GACCTTAG_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077955_GCCTGTTC_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077956_GCACTGTC_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077957_GCTAACTC_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077958_GATTCATC_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077959_GTCTTGGC_L001_15986_1     2  0.0707      0.988 0.00 0.98 0.00 0.02
#> lane3_3600STDY6077962_TTAGGCAT_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077963_TGACCACT_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077964_ACAGTGGT_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077965_GCCAATGT_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077966_CAGATCTG_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077967_ACTTGATG_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077968_GATCAGCG_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077969_TAGCTTGT_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077970_GGCTACAG_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077971_CTTGTACT_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077972_TGGTTGTT_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077973_TCTCGGTT_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077974_TAAGCGTT_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077975_TCCGTCTT_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077976_TGTACCTT_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077977_TTCTGTGT_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077979_TTGGAGGT_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077980_TCGAGCGT_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077981_TGATACGT_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077982_TGCATAGT_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077983_TTGACTCT_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077984_TGCGATCT_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077985_TTCCTGCT_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077986_TAGTGACT_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077987_TACAGGAT_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077988_TCCTCAAT_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077989_TGTGGTTG_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077990_TAGTCTTG_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077991_TTCCATTG_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077992_TCGAAGTG_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077993_TAACGCTG_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077994_TTGGTATG_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077995_TGAACTGG_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077996_TACTTCGG_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077998_TCAGGAGG_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077999_TAAGTTCG_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078000_TCCAGTCG_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078003_TGGCTCAG_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078004_TATGCCAG_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078005_TCAGATTC_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078006_TACTAGTC_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078007_TTCAGCTC_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078008_TGTCTATC_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078009_TATGTGGC_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078010_TTACTCGC_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078011_TCGTTAGC_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078012_TACCGAGC_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078013_TGTTCTCC_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078014_TTCGCACC_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078015_TTGCGTAC_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078016_TCTACGAC_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078017_TGACAGAC_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078018_TAGAACAC_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078019_TCATCCTA_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078020_TGCTGATA_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078021_TAGACGGA_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078022_TGTGAAGA_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078023_TCTCTTCA_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078024_TTGTTCCA_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078025_TGAAGCCA_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078026_TACCACCA_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078028_GGTGAGTT_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078029_GATCTCTT_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078030_GTGTCCTT_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078031_GACGGATT_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078032_GCAACATT_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078033_GGTCGTGT_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078034_GAATCTGT_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078035_GTACATCT_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078036_GAGGTGCT_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078037_GCATGGCT_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078038_GTTAGCCT_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078039_GTCGCTAT_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078040_GGAATGAT_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078041_GAGCCAAT_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078042_GCTCCTTG_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078043_GTAAGGTG_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078044_GAGGATGG_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078045_GTTGTCGG_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078046_GGATTAGG_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078047_GATAGAGG_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078048_GTGTGTCG_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078049_GCAATCCG_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078050_GACCTTAG_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078051_GCCTGTTC_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078052_GCACTGTC_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078053_GCTAACTC_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078054_GATTCATC_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078055_GTCTTGGC_L003_15987_1     2  0.0000      0.988 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167693_ATCACGTT_L001_17236_1     4  0.0000      0.977 0.00 0.00 0.00 1.00
#> lane1_3600STDY6167694_CGATGTTT_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167696_TGACCACT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167698_GCCAATGT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167699_CAGATCTG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167701_GATCAGCG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167702_TAGCTTGT_L001_17236_1     4  0.0000      0.977 0.00 0.00 0.00 1.00
#> lane1_3600STDY6167703_GGCTACAG_L001_17236_1     4  0.0707      0.995 0.00 0.00 0.02 0.98
#> lane1_3600STDY6167705_TGGTTGTT_L001_17236_1     4  0.0707      0.995 0.00 0.00 0.02 0.98
#> lane1_3600STDY6167708_TCCGTCTT_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167709_TGTACCTT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167711_TCTGCTGT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167712_TTGGAGGT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167713_TCGAGCGT_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167714_TGATACGT_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167715_TGCATAGT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167716_TTGACTCT_L001_17236_1     3  0.0707      0.969 0.02 0.00 0.98 0.00
#> lane1_3600STDY6167717_TGCGATCT_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167722_TGTGGTTG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167723_TAGTCTTG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167725_TCGAAGTG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167726_TAACGCTG_L001_17236_1     4  0.0707      0.995 0.00 0.00 0.02 0.98
#> lane1_3600STDY6167727_TTGGTATG_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167728_TGAACTGG_L001_17236_1     2  0.4790      0.427 0.00 0.62 0.00 0.38
#> lane1_3600STDY6167729_TACTTCGG_L001_17236_1     1  0.2011      0.904 0.92 0.00 0.08 0.00
#> lane1_3600STDY6167730_TCTCACGG_L001_17236_1     4  0.0707      0.995 0.00 0.00 0.02 0.98
#> lane1_3600STDY6167731_TCAGGAGG_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167732_TAAGTTCG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167733_TCCAGTCG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167735_TCATTGAG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167736_TGGCTCAG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167737_TATGCCAG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167738_TCAGATTC_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167739_TACTAGTC_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167740_TTCAGCTC_L001_17236_1     3  0.1211      0.950 0.00 0.00 0.96 0.04
#> lane1_3600STDY6167741_TGTCTATC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167742_TATGTGGC_L001_17236_1     3  0.0707      0.969 0.02 0.00 0.98 0.00
#> lane1_3600STDY6167743_TTACTCGC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167744_TCGTTAGC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167746_TGTTCTCC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167748_TTGCGTAC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167749_TCTACGAC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167750_TGACAGAC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167751_TAGAACAC_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167752_TCATCCTA_L001_17236_1     3  0.0707      0.969 0.02 0.00 0.98 0.00
#> lane1_3600STDY6167753_TGCTGATA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167754_TAGACGGA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167755_TGTGAAGA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167756_TCTCTTCA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167757_TTGTTCCA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167759_TACCACCA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167760_TGCGTGAA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167761_GGTGAGTT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167762_GATCTCTT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167763_GTGTCCTT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167764_GACGGATT_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167765_GCAACATT_L001_17236_1     3  0.0707      0.969 0.02 0.00 0.98 0.00
#> lane1_3600STDY6167766_GGTCGTGT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167767_GAATCTGT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167768_GTACATCT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167769_GAGGTGCT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167770_GCATGGCT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167771_GTTAGCCT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167772_GTCGCTAT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167773_GGAATGAT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167774_GAGCCAAT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167775_GCTCCTTG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167777_GAGGATGG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167779_GGATTAGG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167780_GATAGAGG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167781_GTGTGTCG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167782_GCAATCCG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167783_GACCTTAG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167784_GCCTGTTC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167785_GCACTGTC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167786_GCTAACTC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167787_GATTCATC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167789_GTAGAAGC_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167790_GATGGTCC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167791_GTGCTACC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167792_GCGATTAC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167793_GGTTGGAC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167794_GGCACAAC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167795_GACACTTA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167796_GTGCAGTA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167797_GGAGTCTA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167798_GCTATGGA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167800_GTAACCGA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167801_GGCAAGCA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167802_GCCTTACA_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167803_GAACGACA_L001_17236_1     3  0.0707      0.969 0.02 0.00 0.98 0.00
#> lane1_3600STDY6167804_GCAGGTAA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167805_GCGTCGAA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167806_CGTTCGGT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167807_CACCAGGT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167808_CTGCGAGT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167809_CCGTATCT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167811_CAAGACCT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167812_CACACACT_L001_17236_1     4  0.0707      0.995 0.00 0.00 0.02 0.98
#> lane1_3600STDY6167814_CCACCGAT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167815_CTTCACAT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167816_CTATCATG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167818_CCACTTGG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167819_CTGTACGG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167820_CTAGATAG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167822_CCGACAAG_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167823_CTTGCTTC_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167824_CATAGGTC_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167825_CACATTGC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167826_CGCTAAGC_L001_17236_1     4  0.0707      0.995 0.00 0.00 0.02 0.98
#> lane1_3600STDY6167827_CAACCTCC_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167828_CAGCTGAC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167829_CTCAAGAC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167830_CGTGTCAC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167831_CCATGCAC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167832_CGTTACTA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167833_CAAGTAGA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167834_CTCTCTCA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167835_CGACTGCA_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167836_CCTGAGCA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167837_CAGGCTAA_L001_17236_1     4  0.0707      0.995 0.00 0.00 0.02 0.98
#> lane1_3600STDY6167838_CGGAGGAA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167839_AGGAGATT_L001_17236_1     3  0.0707      0.969 0.02 0.00 0.98 0.00
#> lane1_3600STDY6167840_AGGCAGCT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167842_AACGTGTG_L001_17236_1     3  0.0707      0.969 0.02 0.00 0.98 0.00
#> lane1_3600STDY6167845_ATCCTAGG_L001_17236_1     3  0.0707      0.969 0.02 0.00 0.98 0.00
#> lane1_3600STDY6167846_ATCAACCG_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167848_ACTGTTAG_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167849_AAGAGTAG_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167850_ATTCGGAG_L001_17236_1     4  0.0707      0.995 0.00 0.00 0.02 0.98
#> lane1_3600STDY6167851_ACGCAATC_L001_17236_1     4  0.0707      0.995 0.00 0.00 0.02 0.98
#> lane1_3600STDY6167852_ACAAGTGC_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167853_ATGGATCC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167854_AGAGGACC_L001_17236_1     1  0.1637      0.928 0.94 0.00 0.06 0.00
#> lane1_3600STDY6167855_ATCTCCAC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167856_ATTGGCTA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167859_AACTGGCA_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167860_ACAACGCA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167862_AATGAATT_L001_17236_1     4  0.0000      0.977 0.00 0.00 0.00 1.00
#> lane1_3600STDY6167863_TAGGACCC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167864_TCTCAGTG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167865_CATGGGAA_L001_17236_1     4  0.0707      0.995 0.00 0.00 0.02 0.98
#> lane1_3600STDY6167866_CCTAAGAT_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167867_CTCAGATA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167868_CCCATAGG_L001_17236_1     4  0.0707      0.995 0.00 0.00 0.02 0.98
#> lane1_3600STDY6167869_GCTATGAC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167874_GCTGGACA_L001_17236_1     4  0.0707      0.995 0.00 0.00 0.02 0.98
#> lane1_3600STDY6167875_AAGTCGTA_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167876_CATCCGTA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167877_TTGTGTCT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167878_TGCTCTAG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167880_CGATCTGA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167881_GTTCCACG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167882_ACTCTTTC_L001_17236_1     3  0.0707      0.969 0.02 0.00 0.98 0.00
#> lane1_3600STDY6167886_TACCGCAA_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167888_TGTCATCT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167889_ATAGCTCT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167890_AGTCCAAC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167891_TTTGGGCA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167892_TCTGACGC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167893_TGTCGACT_L001_17236_1     3  0.0707      0.969 0.02 0.00 0.98 0.00
#> lane1_3600STDY6167894_GTCACGTA_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167895_TTGAGCGA_L001_17236_1     4  0.0707      0.995 0.00 0.00 0.02 0.98
#> lane1_3600STDY6167896_GAGACATA_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167899_GACGCTCA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167902_CGCCTTTG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167903_TAAGGTCA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167904_ACGTTGGC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167905_CCAGCTTA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167906_GAATCCTA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167907_ACTTCGTA_L001_17236_1     3  0.0707      0.969 0.02 0.00 0.98 0.00
#> lane1_3600STDY6167909_CGCACGAG_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167910_ACGTACTA_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167911_AGCGCCAA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167912_GCCTGCCC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167913_AGGACGAT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167914_CTTGACCG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167915_AGGTCTAA_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167916_CGAGATCC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167917_ATTAGCGG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167919_TGCTGAAC_L001_17236_1     4  0.0707      0.995 0.00 0.00 0.02 0.98
#> lane1_3600STDY6167921_GTTTTCAC_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167922_GAGATGCC_L001_17236_1     3  0.0707      0.969 0.02 0.00 0.98 0.00
#> lane1_3600STDY6167923_TTGAGAAG_L001_17236_1     3  0.0707      0.969 0.02 0.00 0.98 0.00
#> lane1_3600STDY6167924_GCATCCGG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167925_GTCACCAG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167927_AAGGGGTA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167928_TTTTACGT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167929_TTCCTACA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167930_AGTGTAGT_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167931_GTGGCCAA_L001_17236_1     3  0.0707      0.969 0.02 0.00 0.98 0.00
#> lane1_3600STDY6167932_AAATACTC_L001_17236_1     4  0.0000      0.977 0.00 0.00 0.00 1.00
#> lane1_3600STDY6167933_CACCCGTC_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167934_TCGTGGTT_L001_17236_1     1  0.4624      0.485 0.66 0.00 0.34 0.00
#> lane1_3600STDY6167935_ACTTGGGG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167936_GGCTGCTT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167937_CAGGGTCG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167938_CTCGTCGA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167939_TCTACAGT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167941_AACGGCTT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167942_ATAAGACT_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167943_GTTTTTCG_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167944_ATTGGTAT_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167945_CGCCAGTA_L001_17236_1     1  0.3801      0.706 0.78 0.00 0.22 0.00
#> lane1_3600STDY6167946_AAGCCGAA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167947_TGACCCAC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167948_ATTGCACA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167949_CTTTTGAT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167951_TTCGCAGG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167952_TAGTTATT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167953_TCCTCCGA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167954_GCGGGTCT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167955_GATTCTAT_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167956_ATGCAAAG_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167957_GTCTGAGG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167958_TCTGGCGA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167959_AATTTGCG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167961_AGTTGAAA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167962_GACCGGAA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167963_GATCGAAC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167964_GTATAGGG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167966_AGTCCGAT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167967_ATACAGGC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167968_TGAGACTC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167969_ACTCAGGA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167971_CTTGAATC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167972_CCGCATGA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167973_AAGTAACA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167974_GTGGTACT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167975_AGCTGTGC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167976_TTACCTTC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167977_TCCGGGTA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167978_CTACGTAA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167979_TCGGACCG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167980_ATGCGTCG_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167981_TTCTTAGC_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167982_TGAGTAAG_L001_17236_1     1  0.1211      0.952 0.96 0.00 0.04 0.00
#> lane1_3600STDY6167983_AAGTGATA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167984_TCGATGCG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167985_TATTCTGG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167986_AGCCGTGA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167987_AAGCCTTC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167988_AGGTATCC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167990_CTGTTTGA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167991_GGAATTTC_L001_17236_1     3  0.0707      0.969 0.02 0.00 0.98 0.00
#> lane1_3600STDY6167994_AATTAGGC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167995_AATCGGGT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167996_AGGTAGAC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167997_CTTATTCC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167998_CAGGCTCT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167999_AAAGCACG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168000_GTATACAC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168001_GGACATAT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168002_CGGTTGGG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168003_GTCCGTGA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168004_GCCGAACC_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6168006_GGGTCCAT_L001_17236_1     3  0.0707      0.969 0.02 0.00 0.98 0.00
#> lane1_3600STDY6168007_ATAACTAG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168008_AATAGAGA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168009_TCACCATT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168010_CGCCTGAT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168011_GCGTGAAC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168012_TAAGGGTG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168013_GGTGTCGA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168014_CCGTTAGG_L001_17236_1     3  0.0707      0.969 0.02 0.00 0.98 0.00
#> lane1_3600STDY6168015_TGGCAAAA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168017_AACAGCGC_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6168019_AAGCGACT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168020_GAAGCGCA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168021_ACCTCTAC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168022_GATTGCGT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168024_ATCGTCCT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168025_GGACACGG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168026_CGCACCTA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168027_CTTCGGCT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168028_CGAATCGA_L001_17236_1     4  0.0707      0.995 0.00 0.00 0.02 0.98
#> lane1_3600STDY6168029_TAACAACT_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6168030_AGCTCTTT_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6168031_TAATCCCT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168033_TTACACTA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168034_AAACATCA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168035_CCATAGCT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168036_GTTATGGC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168037_ATCCCCTA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168038_CATACTAC_L001_17236_1     4  0.0707      0.995 0.00 0.00 0.02 0.98
#> lane1_3600STDY6168039_CAATTGTT_L001_17236_1     4  0.0707      0.995 0.00 0.00 0.02 0.98
#> lane1_3600STDY6168041_CAGATTTC_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6168042_GCGTAGGT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168043_GGCATTCG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168044_TGGGGCTT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168045_CTGACTAC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168047_AGGGATTC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168048_CCGAGTAG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168049_GGGGACTA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168050_GGAGTTGA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168051_AGCTCATC_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6168052_TAATCAAC_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6168053_ACTGGTCG_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6168054_GACGATTG_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6168055_AGCGATGA_L001_17236_1     1  0.2921      0.825 0.86 0.00 0.14 0.00
#> lane1_3600STDY6168057_CGTATGCA_L001_17236_1     4  0.0707      0.995 0.00 0.00 0.02 0.98
#> lane1_3600STDY6168058_CACGTGCG_L001_17236_1     3  0.0707      0.969 0.02 0.00 0.98 0.00
#> lane1_3600STDY6168059_GCTTAAAC_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6168060_GTTCCGCA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168061_GTATCGTC_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6168062_GTCCTCAC_L001_17236_1     3  0.4624      0.472 0.00 0.00 0.66 0.34
#> lane1_3600STDY6168065_TCCTCTCT_L001_17236_1     4  0.0707      0.995 0.00 0.00 0.02 0.98
#> lane1_3600STDY6168066_AGCAACGA_L001_17236_1     3  0.0707      0.969 0.02 0.00 0.98 0.00
#> lane1_3600STDY6168067_ACAGAAGA_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6168068_CGACCCTT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168070_GAGCGCAT_L001_17236_1     3  0.0707      0.969 0.02 0.00 0.98 0.00
#> lane1_3600STDY6168071_AACTTATC_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6168072_CCGATGTA_L001_17236_1     3  0.0707      0.969 0.02 0.00 0.98 0.00
#> lane1_3600STDY6168073_TTACTACC_L001_17236_1     3  0.0000      0.985 0.00 0.00 1.00 0.00
#> lane1_3600STDY6168074_CAAGGAGC_L001_17236_1     4  0.0707      0.995 0.00 0.00 0.02 0.98

Heatmaps for the consensus matrix. It visualizes the probability of two samples to be in a same group.

consensus_heatmap(res, k = 2)

plot of chunk tab-node-01-consensus-heatmap-1

consensus_heatmap(res, k = 3)

plot of chunk tab-node-01-consensus-heatmap-2

consensus_heatmap(res, k = 4)

plot of chunk tab-node-01-consensus-heatmap-3

Heatmaps for the membership of samples in all partitions to see how consistent they are:

membership_heatmap(res, k = 2)

plot of chunk tab-node-01-membership-heatmap-1

membership_heatmap(res, k = 3)

plot of chunk tab-node-01-membership-heatmap-2

membership_heatmap(res, k = 4)

plot of chunk tab-node-01-membership-heatmap-3

As soon as the classes for columns are determined, the signatures that are significantly different between subgroups can be looked for. Following are the heatmaps for signatures.

Signature heatmaps where rows are scaled:

get_signatures(res, k = 2)

plot of chunk tab-node-01-get-signatures-1

get_signatures(res, k = 3)

plot of chunk tab-node-01-get-signatures-2

get_signatures(res, k = 4)

plot of chunk tab-node-01-get-signatures-3

Signature heatmaps where rows are not scaled:

get_signatures(res, k = 2, scale_rows = FALSE)

plot of chunk tab-node-01-get-signatures-no-scale-1

get_signatures(res, k = 3, scale_rows = FALSE)

plot of chunk tab-node-01-get-signatures-no-scale-2

get_signatures(res, k = 4, scale_rows = FALSE)

plot of chunk tab-node-01-get-signatures-no-scale-3

Compare the overlap of signatures from different k:

compare_signatures(res)

plot of chunk node-01-signature_compare

get_signature() returns a data frame invisibly. To get the list of signatures, the function call should be assigned to a variable explicitly. In following code, if plot argument is set to FALSE, no heatmap is plotted while only the differential analysis is performed.

# code only for demonstration
tb = get_signature(res, k = ..., plot = FALSE)

An example of the output of tb is:

#>   which_row         fdr    mean_1    mean_2 scaled_mean_1 scaled_mean_2 km
#> 1        38 0.042760348  8.373488  9.131774    -0.5533452     0.5164555  1
#> 2        40 0.018707592  7.106213  8.469186    -0.6173731     0.5762149  1
#> 3        55 0.019134737 10.221463 11.207825    -0.6159697     0.5749050  1
#> 4        59 0.006059896  5.921854  7.869574    -0.6899429     0.6439467  1
#> 5        60 0.018055526  8.928898 10.211722    -0.6204761     0.5791110  1
#> 6        98 0.009384629 15.714769 14.887706     0.6635654    -0.6193277  2
...

The columns in tb are:

  1. which_row: row indices corresponding to the input matrix.
  2. fdr: FDR for the differential test.
  3. mean_x: The mean value in group x.
  4. scaled_mean_x: The mean value in group x after rows are scaled.
  5. km: Row groups if k-means clustering is applied to rows (which is done by automatically selecting number of clusters).

If there are too many signatures, top_signatures = ... can be set to only show the signatures with the highest FDRs:

# code only for demonstration
# e.g. to show the top 500 most significant rows
tb = get_signature(res, k = ..., top_signatures = 500)

If the signatures are defined as these which are uniquely high in current group, diff_method argument can be set to "uniquely_high_in_one_group":

# code only for demonstration
tb = get_signature(res, k = ..., diff_method = "uniquely_high_in_one_group")

UMAP plot which shows how samples are separated.

dimension_reduction(res, k = 2, method = "UMAP")

plot of chunk tab-node-01-dimension-reduction-1

dimension_reduction(res, k = 3, method = "UMAP")

plot of chunk tab-node-01-dimension-reduction-2

dimension_reduction(res, k = 4, method = "UMAP")

plot of chunk tab-node-01-dimension-reduction-3

Following heatmap shows how subgroups are split when increasing k:

collect_classes(res)

plot of chunk node-01-collect-classes

Test correlation between subgroups and known annotations. If the known annotation is numeric, one-way ANOVA test is applied, and if the known annotation is discrete, chi-squared contingency table test is applied.

test_to_known_factors(res)
#>             n_sample phenotype(p-value) k
#> ATC:skmeans      491           2.68e-39 2
#> ATC:skmeans      476           7.00e-41 3
#> ATC:skmeans      488           1.40e-41 4

If matrix rows can be associated to genes, consider to use functional_enrichment(res, ...) to perform function enrichment for the signature genes. See this vignette for more detailed explanations.


Node011

Parent node: Node01. Child nodes: Node0111-leaf , Node0112-leaf , Node0113-leaf , Node0121 , Node0122-leaf , Node0123 , Node0211-leaf , Node0212-leaf , Node0213-leaf , Node0221-leaf , Node0222 , Node0223-leaf , Node0224-leaf , Node0231-leaf , Node0232-leaf , Node0311-leaf , Node0312-leaf , Node0313-leaf , Node0341-leaf , Node0342 .

The object with results only for a single top-value method and a single partitioning method can be extracted as:

res = res_rh["011"]

A summary of res and all the functions that can be applied to it:

res
#> A 'ConsensusPartition' object with k = 2, 3, 4.
#>   On a matrix with 16252 rows and 212 columns.
#>   Top rows (1625) are extracted by 'ATC' method.
#>   Subgroups are detected by 'skmeans' method.
#>   Performed in total 150 partitions by row resampling.
#>   Best k for subgroups seems to be 4.
#> 
#> Following methods can be applied to this 'ConsensusPartition' object:
#>  [1] "cola_report"             "collect_classes"         "collect_plots"          
#>  [4] "collect_stats"           "colnames"                "compare_partitions"     
#>  [7] "compare_signatures"      "consensus_heatmap"       "dimension_reduction"    
#> [10] "functional_enrichment"   "get_anno_col"            "get_anno"               
#> [13] "get_classes"             "get_consensus"           "get_matrix"             
#> [16] "get_membership"          "get_param"               "get_signatures"         
#> [19] "get_stats"               "is_best_k"               "is_stable_k"            
#> [22] "membership_heatmap"      "ncol"                    "nrow"                   
#> [25] "plot_ecdf"               "predict_classes"         "rownames"               
#> [28] "select_partition_number" "show"                    "suggest_best_k"         
#> [31] "test_to_known_factors"   "top_rows_heatmap"

collect_plots() function collects all the plots made from res for all k (number of subgroups) into one single page to provide an easy and fast comparison between different k.

collect_plots(res)

plot of chunk node-011-collect-plots

The plots are:

All the plots in panels can be made by individual functions and they are plotted later in this section.

select_partition_number() produces several plots showing different statistics for choosing “optimized” k. There are following statistics:

The detailed explanations of these statistics can be found in the cola vignette.

Generally speaking, higher 1-PAC score, higher mean silhouette score or higher concordance corresponds to better partition. Rand index and Jaccard index measure how similar the current partition is compared to partition with k-1. If they are too similar, we won't accept k is better than k-1.

select_partition_number(res)

plot of chunk node-011-select-partition-number

The numeric values for all these statistics can be obtained by get_stats().

get_stats(res)
#>   k 1-PAC mean_silhouette concordance area_increased  Rand Jaccard
#> 2 2 1.000           0.975       0.991          0.503 0.498   0.498
#> 3 3 1.000           0.980       0.992          0.269 0.821   0.655
#> 4 4 0.981           0.942       0.978          0.108 0.914   0.769

suggest_best_k() suggests the best \(k\) based on these statistics. The rules are as follows:

suggest_best_k(res)
#> [1] 4
#> attr(,"optional")
#> [1] 2 3

There is also optional best \(k\) = 2 3 that is worth to check.

Following is the table of the partitions (You need to click the show/hide code output link to see it). The membership matrix (columns with name p*) is inferred by clue::cl_consensus() function with the SE method. Basically the value in the membership matrix represents the probability to belong to a certain group. The finall subgroup label for an item is determined with the group with highest probability it belongs to.

In get_classes() function, the entropy is calculated from the membership matrix and the silhouette score is calculated from the consensus matrix.

show/hide code output

cbind(get_classes(res, k = 2), get_membership(res, k = 2))
#>                                             class entropy silhouette   p1   p2
#> lane1_3600STDY6167696_TGACCACT_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167698_GCCAATGT_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167699_CAGATCTG_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167701_GATCAGCG_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167709_TGTACCTT_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167711_TCTGCTGT_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167712_TTGGAGGT_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167715_TGCATAGT_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167722_TGTGGTTG_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167723_TAGTCTTG_L001_17236_1     2   0.999     0.0885 0.48 0.52
#> lane1_3600STDY6167725_TCGAAGTG_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167729_TACTTCGG_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167732_TAAGTTCG_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167733_TCCAGTCG_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167735_TCATTGAG_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167736_TGGCTCAG_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167737_TATGCCAG_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167741_TGTCTATC_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167743_TTACTCGC_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167744_TCGTTAGC_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167746_TGTTCTCC_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167748_TTGCGTAC_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167749_TCTACGAC_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167750_TGACAGAC_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167753_TGCTGATA_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167754_TAGACGGA_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167755_TGTGAAGA_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167756_TCTCTTCA_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167757_TTGTTCCA_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167759_TACCACCA_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167760_TGCGTGAA_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167761_GGTGAGTT_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167762_GATCTCTT_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167763_GTGTCCTT_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167766_GGTCGTGT_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167767_GAATCTGT_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167768_GTACATCT_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167769_GAGGTGCT_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167770_GCATGGCT_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167771_GTTAGCCT_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167772_GTCGCTAT_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167773_GGAATGAT_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167774_GAGCCAAT_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167775_GCTCCTTG_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167777_GAGGATGG_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167779_GGATTAGG_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167780_GATAGAGG_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167781_GTGTGTCG_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167782_GCAATCCG_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167783_GACCTTAG_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167784_GCCTGTTC_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167785_GCACTGTC_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167786_GCTAACTC_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167787_GATTCATC_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167790_GATGGTCC_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167791_GTGCTACC_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167792_GCGATTAC_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167793_GGTTGGAC_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167794_GGCACAAC_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167795_GACACTTA_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167796_GTGCAGTA_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167797_GGAGTCTA_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167798_GCTATGGA_L001_17236_1     2   0.242     0.9462 0.04 0.96
#> lane1_3600STDY6167800_GTAACCGA_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167801_GGCAAGCA_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167804_GCAGGTAA_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167805_GCGTCGAA_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167806_CGTTCGGT_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167807_CACCAGGT_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167808_CTGCGAGT_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167809_CCGTATCT_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167811_CAAGACCT_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167814_CCACCGAT_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167815_CTTCACAT_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167816_CTATCATG_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167818_CCACTTGG_L001_17236_1     2   0.999     0.0897 0.48 0.52
#> lane1_3600STDY6167819_CTGTACGG_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167820_CTAGATAG_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167825_CACATTGC_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167828_CAGCTGAC_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167829_CTCAAGAC_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167830_CGTGTCAC_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167831_CCATGCAC_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167832_CGTTACTA_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167833_CAAGTAGA_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167834_CTCTCTCA_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167836_CCTGAGCA_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167838_CGGAGGAA_L001_17236_1     2   0.995     0.1591 0.46 0.54
#> lane1_3600STDY6167840_AGGCAGCT_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167853_ATGGATCC_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167854_AGAGGACC_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167855_ATCTCCAC_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167856_ATTGGCTA_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167860_ACAACGCA_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167863_TAGGACCC_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167864_TCTCAGTG_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167867_CTCAGATA_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167869_GCTATGAC_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167876_CATCCGTA_L001_17236_1     2   0.529     0.8559 0.12 0.88
#> lane1_3600STDY6167877_TTGTGTCT_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167878_TGCTCTAG_L001_17236_1     2   0.141     0.9663 0.02 0.98
#> lane1_3600STDY6167880_CGATCTGA_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167881_GTTCCACG_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167888_TGTCATCT_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167889_ATAGCTCT_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167890_AGTCCAAC_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167891_TTTGGGCA_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167892_TCTGACGC_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167899_GACGCTCA_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167902_CGCCTTTG_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167903_TAAGGTCA_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167904_ACGTTGGC_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167905_CCAGCTTA_L001_17236_1     2   0.141     0.9663 0.02 0.98
#> lane1_3600STDY6167906_GAATCCTA_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167911_AGCGCCAA_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167912_GCCTGCCC_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167913_AGGACGAT_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167914_CTTGACCG_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167916_CGAGATCC_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167917_ATTAGCGG_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167924_GCATCCGG_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167925_GTCACCAG_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167927_AAGGGGTA_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167928_TTTTACGT_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167929_TTCCTACA_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167934_TCGTGGTT_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167935_ACTTGGGG_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167936_GGCTGCTT_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167937_CAGGGTCG_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167938_CTCGTCGA_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167939_TCTACAGT_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167941_AACGGCTT_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167945_CGCCAGTA_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167946_AAGCCGAA_L001_17236_1     1   0.925     0.4714 0.66 0.34
#> lane1_3600STDY6167947_TGACCCAC_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167948_ATTGCACA_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167949_CTTTTGAT_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167951_TTCGCAGG_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167952_TAGTTATT_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167953_TCCTCCGA_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167954_GCGGGTCT_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167957_GTCTGAGG_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167958_TCTGGCGA_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167959_AATTTGCG_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167961_AGTTGAAA_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167962_GACCGGAA_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167963_GATCGAAC_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167964_GTATAGGG_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167966_AGTCCGAT_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167967_ATACAGGC_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167968_TGAGACTC_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167969_ACTCAGGA_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167971_CTTGAATC_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167972_CCGCATGA_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167973_AAGTAACA_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167974_GTGGTACT_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167975_AGCTGTGC_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167976_TTACCTTC_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167977_TCCGGGTA_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167978_CTACGTAA_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167979_TCGGACCG_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167982_TGAGTAAG_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167983_AAGTGATA_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167984_TCGATGCG_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167985_TATTCTGG_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167986_AGCCGTGA_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167987_AAGCCTTC_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167988_AGGTATCC_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167990_CTGTTTGA_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6167994_AATTAGGC_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167995_AATCGGGT_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167996_AGGTAGAC_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167997_CTTATTCC_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167998_CAGGCTCT_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6167999_AAAGCACG_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6168000_GTATACAC_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6168001_GGACATAT_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6168002_CGGTTGGG_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6168003_GTCCGTGA_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6168007_ATAACTAG_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6168008_AATAGAGA_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6168009_TCACCATT_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6168010_CGCCTGAT_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6168011_GCGTGAAC_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6168012_TAAGGGTG_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6168013_GGTGTCGA_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6168015_TGGCAAAA_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6168019_AAGCGACT_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6168020_GAAGCGCA_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6168021_ACCTCTAC_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6168022_GATTGCGT_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6168024_ATCGTCCT_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6168025_GGACACGG_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6168026_CGCACCTA_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6168027_CTTCGGCT_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6168031_TAATCCCT_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6168033_TTACACTA_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6168034_AAACATCA_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6168035_CCATAGCT_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6168036_GTTATGGC_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6168037_ATCCCCTA_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6168042_GCGTAGGT_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6168043_GGCATTCG_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6168044_TGGGGCTT_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6168045_CTGACTAC_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6168047_AGGGATTC_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6168048_CCGAGTAG_L001_17236_1     2   0.000     0.9849 0.00 1.00
#> lane1_3600STDY6168049_GGGGACTA_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6168050_GGAGTTGA_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6168055_AGCGATGA_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6168060_GTTCCGCA_L001_17236_1     1   0.000     0.9966 1.00 0.00
#> lane1_3600STDY6168068_CGACCCTT_L001_17236_1     1   0.000     0.9966 1.00 0.00

show/hide code output

cbind(get_classes(res, k = 3), get_membership(res, k = 3))
#>                                             class entropy silhouette   p1   p2   p3
#> lane1_3600STDY6167696_TGACCACT_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167698_GCCAATGT_L001_17236_1     3  0.0000      0.980 0.00 0.00 1.00
#> lane1_3600STDY6167699_CAGATCTG_L001_17236_1     3  0.0000      0.980 0.00 0.00 1.00
#> lane1_3600STDY6167701_GATCAGCG_L001_17236_1     3  0.0000      0.980 0.00 0.00 1.00
#> lane1_3600STDY6167709_TGTACCTT_L001_17236_1     3  0.0000      0.980 0.00 0.00 1.00
#> lane1_3600STDY6167711_TCTGCTGT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167712_TTGGAGGT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167715_TGCATAGT_L001_17236_1     3  0.0000      0.980 0.00 0.00 1.00
#> lane1_3600STDY6167722_TGTGGTTG_L001_17236_1     3  0.2537      0.901 0.00 0.08 0.92
#> lane1_3600STDY6167723_TAGTCTTG_L001_17236_1     3  0.0000      0.980 0.00 0.00 1.00
#> lane1_3600STDY6167725_TCGAAGTG_L001_17236_1     3  0.0000      0.980 0.00 0.00 1.00
#> lane1_3600STDY6167729_TACTTCGG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167732_TAAGTTCG_L001_17236_1     3  0.0000      0.980 0.00 0.00 1.00
#> lane1_3600STDY6167733_TCCAGTCG_L001_17236_1     3  0.0000      0.980 0.00 0.00 1.00
#> lane1_3600STDY6167735_TCATTGAG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167736_TGGCTCAG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167737_TATGCCAG_L001_17236_1     3  0.0000      0.980 0.00 0.00 1.00
#> lane1_3600STDY6167741_TGTCTATC_L001_17236_1     3  0.0000      0.980 0.00 0.00 1.00
#> lane1_3600STDY6167743_TTACTCGC_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167744_TCGTTAGC_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167746_TGTTCTCC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167748_TTGCGTAC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167749_TCTACGAC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167750_TGACAGAC_L001_17236_1     3  0.0000      0.980 0.00 0.00 1.00
#> lane1_3600STDY6167753_TGCTGATA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167754_TAGACGGA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167755_TGTGAAGA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167756_TCTCTTCA_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167757_TTGTTCCA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167759_TACCACCA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167760_TGCGTGAA_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167761_GGTGAGTT_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167762_GATCTCTT_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167763_GTGTCCTT_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167766_GGTCGTGT_L001_17236_1     3  0.5835      0.485 0.00 0.34 0.66
#> lane1_3600STDY6167767_GAATCTGT_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167768_GTACATCT_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167769_GAGGTGCT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167770_GCATGGCT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167771_GTTAGCCT_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167772_GTCGCTAT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167773_GGAATGAT_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167774_GAGCCAAT_L001_17236_1     3  0.0000      0.980 0.00 0.00 1.00
#> lane1_3600STDY6167775_GCTCCTTG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167777_GAGGATGG_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167779_GGATTAGG_L001_17236_1     3  0.5835      0.479 0.34 0.00 0.66
#> lane1_3600STDY6167780_GATAGAGG_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167781_GTGTGTCG_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167782_GCAATCCG_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167783_GACCTTAG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167784_GCCTGTTC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167785_GCACTGTC_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167786_GCTAACTC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167787_GATTCATC_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167790_GATGGTCC_L001_17236_1     3  0.0000      0.980 0.00 0.00 1.00
#> lane1_3600STDY6167791_GTGCTACC_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167792_GCGATTAC_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167793_GGTTGGAC_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167794_GGCACAAC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167795_GACACTTA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167796_GTGCAGTA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167797_GGAGTCTA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167798_GCTATGGA_L001_17236_1     2  0.6244      0.210 0.44 0.56 0.00
#> lane1_3600STDY6167800_GTAACCGA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167801_GGCAAGCA_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167804_GCAGGTAA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167805_GCGTCGAA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167806_CGTTCGGT_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167807_CACCAGGT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167808_CTGCGAGT_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167809_CCGTATCT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167811_CAAGACCT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167814_CCACCGAT_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167815_CTTCACAT_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167816_CTATCATG_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167818_CCACTTGG_L001_17236_1     1  0.8733      0.378 0.58 0.16 0.26
#> lane1_3600STDY6167819_CTGTACGG_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167820_CTAGATAG_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167825_CACATTGC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167828_CAGCTGAC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167829_CTCAAGAC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167830_CGTGTCAC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167831_CCATGCAC_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167832_CGTTACTA_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167833_CAAGTAGA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167834_CTCTCTCA_L001_17236_1     3  0.0000      0.980 0.00 0.00 1.00
#> lane1_3600STDY6167836_CCTGAGCA_L001_17236_1     3  0.0000      0.980 0.00 0.00 1.00
#> lane1_3600STDY6167838_CGGAGGAA_L001_17236_1     3  0.0000      0.980 0.00 0.00 1.00
#> lane1_3600STDY6167840_AGGCAGCT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167853_ATGGATCC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167854_AGAGGACC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167855_ATCTCCAC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167856_ATTGGCTA_L001_17236_1     3  0.0000      0.980 0.00 0.00 1.00
#> lane1_3600STDY6167860_ACAACGCA_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167863_TAGGACCC_L001_17236_1     3  0.0000      0.980 0.00 0.00 1.00
#> lane1_3600STDY6167864_TCTCAGTG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167867_CTCAGATA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167869_GCTATGAC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167876_CATCCGTA_L001_17236_1     3  0.0000      0.980 0.00 0.00 1.00
#> lane1_3600STDY6167877_TTGTGTCT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167878_TGCTCTAG_L001_17236_1     2  0.0892      0.971 0.02 0.98 0.00
#> lane1_3600STDY6167880_CGATCTGA_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167881_GTTCCACG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167888_TGTCATCT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167889_ATAGCTCT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167890_AGTCCAAC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167891_TTTGGGCA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167892_TCTGACGC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167899_GACGCTCA_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167902_CGCCTTTG_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167903_TAAGGTCA_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167904_ACGTTGGC_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167905_CCAGCTTA_L001_17236_1     3  0.0000      0.980 0.00 0.00 1.00
#> lane1_3600STDY6167906_GAATCCTA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167911_AGCGCCAA_L001_17236_1     3  0.0000      0.980 0.00 0.00 1.00
#> lane1_3600STDY6167912_GCCTGCCC_L001_17236_1     3  0.0000      0.980 0.00 0.00 1.00
#> lane1_3600STDY6167913_AGGACGAT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167914_CTTGACCG_L001_17236_1     3  0.0000      0.980 0.00 0.00 1.00
#> lane1_3600STDY6167916_CGAGATCC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167917_ATTAGCGG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167924_GCATCCGG_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167925_GTCACCAG_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167927_AAGGGGTA_L001_17236_1     3  0.0000      0.980 0.00 0.00 1.00
#> lane1_3600STDY6167928_TTTTACGT_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167929_TTCCTACA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167934_TCGTGGTT_L001_17236_1     3  0.0000      0.980 0.00 0.00 1.00
#> lane1_3600STDY6167935_ACTTGGGG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167936_GGCTGCTT_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167937_CAGGGTCG_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167938_CTCGTCGA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167939_TCTACAGT_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167941_AACGGCTT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167945_CGCCAGTA_L001_17236_1     3  0.0000      0.980 0.00 0.00 1.00
#> lane1_3600STDY6167946_AAGCCGAA_L001_17236_1     3  0.0000      0.980 0.00 0.00 1.00
#> lane1_3600STDY6167947_TGACCCAC_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167948_ATTGCACA_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167949_CTTTTGAT_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167951_TTCGCAGG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167952_TAGTTATT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167953_TCCTCCGA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167954_GCGGGTCT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167957_GTCTGAGG_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167958_TCTGGCGA_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167959_AATTTGCG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167961_AGTTGAAA_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167962_GACCGGAA_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167963_GATCGAAC_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167964_GTATAGGG_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167966_AGTCCGAT_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167967_ATACAGGC_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167968_TGAGACTC_L001_17236_1     3  0.0000      0.980 0.00 0.00 1.00
#> lane1_3600STDY6167969_ACTCAGGA_L001_17236_1     3  0.0000      0.980 0.00 0.00 1.00
#> lane1_3600STDY6167971_CTTGAATC_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167972_CCGCATGA_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167973_AAGTAACA_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167974_GTGGTACT_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167975_AGCTGTGC_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167976_TTACCTTC_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167977_TCCGGGTA_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167978_CTACGTAA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167979_TCGGACCG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167982_TGAGTAAG_L001_17236_1     3  0.0000      0.980 0.00 0.00 1.00
#> lane1_3600STDY6167983_AAGTGATA_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167984_TCGATGCG_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167985_TATTCTGG_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167986_AGCCGTGA_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167987_AAGCCTTC_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167988_AGGTATCC_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167990_CTGTTTGA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6167994_AATTAGGC_L001_17236_1     3  0.0000      0.980 0.00 0.00 1.00
#> lane1_3600STDY6167995_AATCGGGT_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167996_AGGTAGAC_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167997_CTTATTCC_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167998_CAGGCTCT_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6167999_AAAGCACG_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6168000_GTATACAC_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6168001_GGACATAT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6168002_CGGTTGGG_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6168003_GTCCGTGA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6168007_ATAACTAG_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6168008_AATAGAGA_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6168009_TCACCATT_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6168010_CGCCTGAT_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6168011_GCGTGAAC_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6168012_TAAGGGTG_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6168013_GGTGTCGA_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6168015_TGGCAAAA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6168019_AAGCGACT_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6168020_GAAGCGCA_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6168021_ACCTCTAC_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6168022_GATTGCGT_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6168024_ATCGTCCT_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6168025_GGACACGG_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6168026_CGCACCTA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6168027_CTTCGGCT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6168031_TAATCCCT_L001_17236_1     3  0.0000      0.980 0.00 0.00 1.00
#> lane1_3600STDY6168033_TTACACTA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6168034_AAACATCA_L001_17236_1     3  0.0000      0.980 0.00 0.00 1.00
#> lane1_3600STDY6168035_CCATAGCT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6168036_GTTATGGC_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6168037_ATCCCCTA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6168042_GCGTAGGT_L001_17236_1     3  0.0000      0.980 0.00 0.00 1.00
#> lane1_3600STDY6168043_GGCATTCG_L001_17236_1     3  0.0000      0.980 0.00 0.00 1.00
#> lane1_3600STDY6168044_TGGGGCTT_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6168045_CTGACTAC_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6168047_AGGGATTC_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6168048_CCGAGTAG_L001_17236_1     2  0.0000      0.994 0.00 1.00 0.00
#> lane1_3600STDY6168049_GGGGACTA_L001_17236_1     3  0.0000      0.980 0.00 0.00 1.00
#> lane1_3600STDY6168050_GGAGTTGA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6168055_AGCGATGA_L001_17236_1     3  0.0000      0.980 0.00 0.00 1.00
#> lane1_3600STDY6168060_GTTCCGCA_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6168068_CGACCCTT_L001_17236_1     1  0.0000      0.995 1.00 0.00 0.00

show/hide code output

cbind(get_classes(res, k = 4), get_membership(res, k = 4))
#>                                             class entropy silhouette   p1   p2   p3   p4
#> lane1_3600STDY6167696_TGACCACT_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167698_GCCAATGT_L001_17236_1     3  0.0000     0.9870 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167699_CAGATCTG_L001_17236_1     3  0.0000     0.9870 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167701_GATCAGCG_L001_17236_1     3  0.0000     0.9870 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167709_TGTACCTT_L001_17236_1     3  0.0000     0.9870 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167711_TCTGCTGT_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167712_TTGGAGGT_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167715_TGCATAGT_L001_17236_1     3  0.0000     0.9870 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167722_TGTGGTTG_L001_17236_1     2  0.2647     0.8255 0.00 0.88 0.12 0.00
#> lane1_3600STDY6167723_TAGTCTTG_L001_17236_1     3  0.0000     0.9870 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167725_TCGAAGTG_L001_17236_1     3  0.0000     0.9870 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167729_TACTTCGG_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167732_TAAGTTCG_L001_17236_1     3  0.2921     0.7934 0.00 0.14 0.86 0.00
#> lane1_3600STDY6167733_TCCAGTCG_L001_17236_1     3  0.0000     0.9870 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167735_TCATTGAG_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167736_TGGCTCAG_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167737_TATGCCAG_L001_17236_1     3  0.0000     0.9870 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167741_TGTCTATC_L001_17236_1     3  0.0000     0.9870 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167743_TTACTCGC_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167744_TCGTTAGC_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167746_TGTTCTCC_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167748_TTGCGTAC_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167749_TCTACGAC_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167750_TGACAGAC_L001_17236_1     3  0.0000     0.9870 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167753_TGCTGATA_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167754_TAGACGGA_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167755_TGTGAAGA_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167756_TCTCTTCA_L001_17236_1     4  0.0000     0.9515 0.00 0.00 0.00 1.00
#> lane1_3600STDY6167757_TTGTTCCA_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167759_TACCACCA_L001_17236_1     4  0.0000     0.9515 0.00 0.00 0.00 1.00
#> lane1_3600STDY6167760_TGCGTGAA_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167761_GGTGAGTT_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167762_GATCTCTT_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167763_GTGTCCTT_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167766_GGTCGTGT_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167767_GAATCTGT_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167768_GTACATCT_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167769_GAGGTGCT_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167770_GCATGGCT_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167771_GTTAGCCT_L001_17236_1     4  0.2647     0.8342 0.00 0.12 0.00 0.88
#> lane1_3600STDY6167772_GTCGCTAT_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167773_GGAATGAT_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167774_GAGCCAAT_L001_17236_1     3  0.2011     0.8813 0.00 0.08 0.92 0.00
#> lane1_3600STDY6167775_GCTCCTTG_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167777_GAGGATGG_L001_17236_1     4  0.0000     0.9515 0.00 0.00 0.00 1.00
#> lane1_3600STDY6167779_GGATTAGG_L001_17236_1     3  0.2921     0.7945 0.14 0.00 0.86 0.00
#> lane1_3600STDY6167780_GATAGAGG_L001_17236_1     4  0.0000     0.9515 0.00 0.00 0.00 1.00
#> lane1_3600STDY6167781_GTGTGTCG_L001_17236_1     4  0.0000     0.9515 0.00 0.00 0.00 1.00
#> lane1_3600STDY6167782_GCAATCCG_L001_17236_1     4  0.0000     0.9515 0.00 0.00 0.00 1.00
#> lane1_3600STDY6167783_GACCTTAG_L001_17236_1     4  0.0000     0.9515 0.00 0.00 0.00 1.00
#> lane1_3600STDY6167784_GCCTGTTC_L001_17236_1     4  0.0000     0.9515 0.00 0.00 0.00 1.00
#> lane1_3600STDY6167785_GCACTGTC_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167786_GCTAACTC_L001_17236_1     4  0.0000     0.9515 0.00 0.00 0.00 1.00
#> lane1_3600STDY6167787_GATTCATC_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167790_GATGGTCC_L001_17236_1     3  0.0000     0.9870 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167791_GTGCTACC_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167792_GCGATTAC_L001_17236_1     4  0.3172     0.7897 0.00 0.16 0.00 0.84
#> lane1_3600STDY6167793_GGTTGGAC_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167794_GGCACAAC_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167795_GACACTTA_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167796_GTGCAGTA_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167797_GGAGTCTA_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167798_GCTATGGA_L001_17236_1     4  0.1411     0.9232 0.02 0.02 0.00 0.96
#> lane1_3600STDY6167800_GTAACCGA_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167801_GGCAAGCA_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167804_GCAGGTAA_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167805_GCGTCGAA_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167806_CGTTCGGT_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167807_CACCAGGT_L001_17236_1     4  0.0000     0.9515 0.00 0.00 0.00 1.00
#> lane1_3600STDY6167808_CTGCGAGT_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167809_CCGTATCT_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167811_CAAGACCT_L001_17236_1     4  0.0000     0.9515 0.00 0.00 0.00 1.00
#> lane1_3600STDY6167814_CCACCGAT_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167815_CTTCACAT_L001_17236_1     4  0.4948     0.1901 0.00 0.44 0.00 0.56
#> lane1_3600STDY6167816_CTATCATG_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167818_CCACTTGG_L001_17236_1     1  0.4134     0.6045 0.74 0.26 0.00 0.00
#> lane1_3600STDY6167819_CTGTACGG_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167820_CTAGATAG_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167825_CACATTGC_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167828_CAGCTGAC_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167829_CTCAAGAC_L001_17236_1     1  0.2011     0.9110 0.92 0.00 0.00 0.08
#> lane1_3600STDY6167830_CGTGTCAC_L001_17236_1     1  0.3172     0.8168 0.84 0.00 0.00 0.16
#> lane1_3600STDY6167831_CCATGCAC_L001_17236_1     2  0.4134     0.6398 0.00 0.74 0.00 0.26
#> lane1_3600STDY6167832_CGTTACTA_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167833_CAAGTAGA_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167834_CTCTCTCA_L001_17236_1     3  0.0000     0.9870 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167836_CCTGAGCA_L001_17236_1     3  0.0000     0.9870 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167838_CGGAGGAA_L001_17236_1     3  0.0000     0.9870 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167840_AGGCAGCT_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167853_ATGGATCC_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167854_AGAGGACC_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167855_ATCTCCAC_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167856_ATTGGCTA_L001_17236_1     3  0.0000     0.9870 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167860_ACAACGCA_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167863_TAGGACCC_L001_17236_1     3  0.0000     0.9870 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167864_TCTCAGTG_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167867_CTCAGATA_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167869_GCTATGAC_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167876_CATCCGTA_L001_17236_1     3  0.0000     0.9870 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167877_TTGTGTCT_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167878_TGCTCTAG_L001_17236_1     4  0.0000     0.9515 0.00 0.00 0.00 1.00
#> lane1_3600STDY6167880_CGATCTGA_L001_17236_1     4  0.0000     0.9515 0.00 0.00 0.00 1.00
#> lane1_3600STDY6167881_GTTCCACG_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167888_TGTCATCT_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167889_ATAGCTCT_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167890_AGTCCAAC_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167891_TTTGGGCA_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167892_TCTGACGC_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167899_GACGCTCA_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167902_CGCCTTTG_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167903_TAAGGTCA_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167904_ACGTTGGC_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167905_CCAGCTTA_L001_17236_1     3  0.0000     0.9870 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167906_GAATCCTA_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167911_AGCGCCAA_L001_17236_1     3  0.0000     0.9870 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167912_GCCTGCCC_L001_17236_1     3  0.0000     0.9870 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167913_AGGACGAT_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167914_CTTGACCG_L001_17236_1     3  0.0000     0.9870 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167916_CGAGATCC_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167917_ATTAGCGG_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167924_GCATCCGG_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167925_GTCACCAG_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167927_AAGGGGTA_L001_17236_1     3  0.0000     0.9870 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167928_TTTTACGT_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167929_TTCCTACA_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167934_TCGTGGTT_L001_17236_1     3  0.0000     0.9870 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167935_ACTTGGGG_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167936_GGCTGCTT_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167937_CAGGGTCG_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167938_CTCGTCGA_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167939_TCTACAGT_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167941_AACGGCTT_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167945_CGCCAGTA_L001_17236_1     3  0.0000     0.9870 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167946_AAGCCGAA_L001_17236_1     3  0.0000     0.9870 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167947_TGACCCAC_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167948_ATTGCACA_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167949_CTTTTGAT_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167951_TTCGCAGG_L001_17236_1     4  0.0000     0.9515 0.00 0.00 0.00 1.00
#> lane1_3600STDY6167952_TAGTTATT_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167953_TCCTCCGA_L001_17236_1     1  0.0707     0.9714 0.98 0.00 0.00 0.02
#> lane1_3600STDY6167954_GCGGGTCT_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167957_GTCTGAGG_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167958_TCTGGCGA_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167959_AATTTGCG_L001_17236_1     1  0.3172     0.8153 0.84 0.00 0.00 0.16
#> lane1_3600STDY6167961_AGTTGAAA_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167962_GACCGGAA_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167963_GATCGAAC_L001_17236_1     2  0.4977     0.1373 0.00 0.54 0.00 0.46
#> lane1_3600STDY6167964_GTATAGGG_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167966_AGTCCGAT_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167967_ATACAGGC_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167968_TGAGACTC_L001_17236_1     3  0.0000     0.9870 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167969_ACTCAGGA_L001_17236_1     3  0.0000     0.9870 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167971_CTTGAATC_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167972_CCGCATGA_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167973_AAGTAACA_L001_17236_1     2  0.4977     0.1373 0.00 0.54 0.00 0.46
#> lane1_3600STDY6167974_GTGGTACT_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167975_AGCTGTGC_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167976_TTACCTTC_L001_17236_1     2  0.4948     0.2026 0.00 0.56 0.00 0.44
#> lane1_3600STDY6167977_TCCGGGTA_L001_17236_1     4  0.0000     0.9515 0.00 0.00 0.00 1.00
#> lane1_3600STDY6167978_CTACGTAA_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167979_TCGGACCG_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167982_TGAGTAAG_L001_17236_1     3  0.0000     0.9870 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167983_AAGTGATA_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167984_TCGATGCG_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167985_TATTCTGG_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167986_AGCCGTGA_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167987_AAGCCTTC_L001_17236_1     4  0.0000     0.9515 0.00 0.00 0.00 1.00
#> lane1_3600STDY6167988_AGGTATCC_L001_17236_1     2  0.2011     0.8829 0.00 0.92 0.00 0.08
#> lane1_3600STDY6167990_CTGTTTGA_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167994_AATTAGGC_L001_17236_1     3  0.0000     0.9870 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167995_AATCGGGT_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167996_AGGTAGAC_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167997_CTTATTCC_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167998_CAGGCTCT_L001_17236_1     2  0.4948     0.2031 0.00 0.56 0.00 0.44
#> lane1_3600STDY6167999_AAAGCACG_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168000_GTATACAC_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6168001_GGACATAT_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168002_CGGTTGGG_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6168003_GTCCGTGA_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168007_ATAACTAG_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6168008_AATAGAGA_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6168009_TCACCATT_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6168010_CGCCTGAT_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6168011_GCGTGAAC_L001_17236_1     2  0.0707     0.9429 0.00 0.98 0.02 0.00
#> lane1_3600STDY6168012_TAAGGGTG_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6168013_GGTGTCGA_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6168015_TGGCAAAA_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168019_AAGCGACT_L001_17236_1     4  0.0000     0.9515 0.00 0.00 0.00 1.00
#> lane1_3600STDY6168020_GAAGCGCA_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6168021_ACCTCTAC_L001_17236_1     2  0.4994     0.0643 0.00 0.52 0.00 0.48
#> lane1_3600STDY6168022_GATTGCGT_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6168024_ATCGTCCT_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6168025_GGACACGG_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6168026_CGCACCTA_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168027_CTTCGGCT_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168031_TAATCCCT_L001_17236_1     3  0.0000     0.9870 0.00 0.00 1.00 0.00
#> lane1_3600STDY6168033_TTACACTA_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168034_AAACATCA_L001_17236_1     3  0.0000     0.9870 0.00 0.00 1.00 0.00
#> lane1_3600STDY6168035_CCATAGCT_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168036_GTTATGGC_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6168037_ATCCCCTA_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168042_GCGTAGGT_L001_17236_1     3  0.0000     0.9870 0.00 0.00 1.00 0.00
#> lane1_3600STDY6168043_GGCATTCG_L001_17236_1     3  0.0000     0.9870 0.00 0.00 1.00 0.00
#> lane1_3600STDY6168044_TGGGGCTT_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6168045_CTGACTAC_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6168047_AGGGATTC_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6168048_CCGAGTAG_L001_17236_1     2  0.0000     0.9625 0.00 1.00 0.00 0.00
#> lane1_3600STDY6168049_GGGGACTA_L001_17236_1     3  0.0000     0.9870 0.00 0.00 1.00 0.00
#> lane1_3600STDY6168050_GGAGTTGA_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168055_AGCGATGA_L001_17236_1     3  0.0000     0.9870 0.00 0.00 1.00 0.00
#> lane1_3600STDY6168060_GTTCCGCA_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168068_CGACCCTT_L001_17236_1     1  0.0000     0.9895 1.00 0.00 0.00 0.00

Heatmaps for the consensus matrix. It visualizes the probability of two samples to be in a same group.

consensus_heatmap(res, k = 2)

plot of chunk tab-node-011-consensus-heatmap-1

consensus_heatmap(res, k = 3)

plot of chunk tab-node-011-consensus-heatmap-2

consensus_heatmap(res, k = 4)

plot of chunk tab-node-011-consensus-heatmap-3

Heatmaps for the membership of samples in all partitions to see how consistent they are:

membership_heatmap(res, k = 2)

plot of chunk tab-node-011-membership-heatmap-1

membership_heatmap(res, k = 3)

plot of chunk tab-node-011-membership-heatmap-2

membership_heatmap(res, k = 4)

plot of chunk tab-node-011-membership-heatmap-3

As soon as the classes for columns are determined, the signatures that are significantly different between subgroups can be looked for. Following are the heatmaps for signatures.

Signature heatmaps where rows are scaled:

get_signatures(res, k = 2)

plot of chunk tab-node-011-get-signatures-1

get_signatures(res, k = 3)

plot of chunk tab-node-011-get-signatures-2

get_signatures(res, k = 4)

plot of chunk tab-node-011-get-signatures-3

Signature heatmaps where rows are not scaled:

get_signatures(res, k = 2, scale_rows = FALSE)

plot of chunk tab-node-011-get-signatures-no-scale-1

get_signatures(res, k = 3, scale_rows = FALSE)

plot of chunk tab-node-011-get-signatures-no-scale-2

get_signatures(res, k = 4, scale_rows = FALSE)

plot of chunk tab-node-011-get-signatures-no-scale-3

Compare the overlap of signatures from different k:

compare_signatures(res)

plot of chunk node-011-signature_compare

get_signature() returns a data frame invisibly. To get the list of signatures, the function call should be assigned to a variable explicitly. In following code, if plot argument is set to FALSE, no heatmap is plotted while only the differential analysis is performed.

# code only for demonstration
tb = get_signature(res, k = ..., plot = FALSE)

An example of the output of tb is:

#>   which_row         fdr    mean_1    mean_2 scaled_mean_1 scaled_mean_2 km
#> 1        38 0.042760348  8.373488  9.131774    -0.5533452     0.5164555  1
#> 2        40 0.018707592  7.106213  8.469186    -0.6173731     0.5762149  1
#> 3        55 0.019134737 10.221463 11.207825    -0.6159697     0.5749050  1
#> 4        59 0.006059896  5.921854  7.869574    -0.6899429     0.6439467  1
#> 5        60 0.018055526  8.928898 10.211722    -0.6204761     0.5791110  1
#> 6        98 0.009384629 15.714769 14.887706     0.6635654    -0.6193277  2
...

The columns in tb are:

  1. which_row: row indices corresponding to the input matrix.
  2. fdr: FDR for the differential test.
  3. mean_x: The mean value in group x.
  4. scaled_mean_x: The mean value in group x after rows are scaled.
  5. km: Row groups if k-means clustering is applied to rows (which is done by automatically selecting number of clusters).

If there are too many signatures, top_signatures = ... can be set to only show the signatures with the highest FDRs:

# code only for demonstration
# e.g. to show the top 500 most significant rows
tb = get_signature(res, k = ..., top_signatures = 500)

If the signatures are defined as these which are uniquely high in current group, diff_method argument can be set to "uniquely_high_in_one_group":

# code only for demonstration
tb = get_signature(res, k = ..., diff_method = "uniquely_high_in_one_group")

UMAP plot which shows how samples are separated.

dimension_reduction(res, k = 2, method = "UMAP")

plot of chunk tab-node-011-dimension-reduction-1

dimension_reduction(res, k = 3, method = "UMAP")

plot of chunk tab-node-011-dimension-reduction-2

dimension_reduction(res, k = 4, method = "UMAP")

plot of chunk tab-node-011-dimension-reduction-3

Following heatmap shows how subgroups are split when increasing k:

collect_classes(res)

plot of chunk node-011-collect-classes

Test correlation between subgroups and known annotations. If the known annotation is numeric, one-way ANOVA test is applied, and if the known annotation is discrete, chi-squared contingency table test is applied.

test_to_known_factors(res)
#>             n_sample phenotype(p-value) k
#> ATC:skmeans      208                 NA 2
#> ATC:skmeans      208                 NA 3
#> ATC:skmeans      206                 NA 4

If matrix rows can be associated to genes, consider to use functional_enrichment(res, ...) to perform function enrichment for the signature genes. See this vignette for more detailed explanations.


Node012

Parent node: Node01. Child nodes: Node0111-leaf , Node0112-leaf , Node0113-leaf , Node0121 , Node0122-leaf , Node0123 , Node0211-leaf , Node0212-leaf , Node0213-leaf , Node0221-leaf , Node0222 , Node0223-leaf , Node0224-leaf , Node0231-leaf , Node0232-leaf , Node0311-leaf , Node0312-leaf , Node0313-leaf , Node0341-leaf , Node0342 .

The object with results only for a single top-value method and a single partitioning method can be extracted as:

res = res_rh["012"]

A summary of res and all the functions that can be applied to it:

res
#> A 'ConsensusPartition' object with k = 2, 3, 4.
#>   On a matrix with 16750 rows and 177 columns.
#>   Top rows (1675) are extracted by 'ATC' method.
#>   Subgroups are detected by 'skmeans' method.
#>   Performed in total 150 partitions by row resampling.
#>   Best k for subgroups seems to be 3.
#> 
#> Following methods can be applied to this 'ConsensusPartition' object:
#>  [1] "cola_report"             "collect_classes"         "collect_plots"          
#>  [4] "collect_stats"           "colnames"                "compare_partitions"     
#>  [7] "compare_signatures"      "consensus_heatmap"       "dimension_reduction"    
#> [10] "functional_enrichment"   "get_anno_col"            "get_anno"               
#> [13] "get_classes"             "get_consensus"           "get_matrix"             
#> [16] "get_membership"          "get_param"               "get_signatures"         
#> [19] "get_stats"               "is_best_k"               "is_stable_k"            
#> [22] "membership_heatmap"      "ncol"                    "nrow"                   
#> [25] "plot_ecdf"               "predict_classes"         "rownames"               
#> [28] "select_partition_number" "show"                    "suggest_best_k"         
#> [31] "test_to_known_factors"   "top_rows_heatmap"

collect_plots() function collects all the plots made from res for all k (number of subgroups) into one single page to provide an easy and fast comparison between different k.

collect_plots(res)

plot of chunk node-012-collect-plots

The plots are:

All the plots in panels can be made by individual functions and they are plotted later in this section.

select_partition_number() produces several plots showing different statistics for choosing “optimized” k. There are following statistics:

The detailed explanations of these statistics can be found in the cola vignette.

Generally speaking, higher 1-PAC score, higher mean silhouette score or higher concordance corresponds to better partition. Rand index and Jaccard index measure how similar the current partition is compared to partition with k-1. If they are too similar, we won't accept k is better than k-1.

select_partition_number(res)

plot of chunk node-012-select-partition-number

The numeric values for all these statistics can be obtained by get_stats().

get_stats(res)
#>   k 1-PAC mean_silhouette concordance area_increased  Rand Jaccard
#> 2 2 1.000           1.000       1.000         0.5033 0.497   0.497
#> 3 3 0.915           0.966       0.971         0.2388 0.874   0.747
#> 4 4 0.836           0.876       0.937         0.0988 0.964   0.902

suggest_best_k() suggests the best \(k\) based on these statistics. The rules are as follows:

suggest_best_k(res)
#> [1] 3
#> attr(,"optional")
#> [1] 2

There is also optional best \(k\) = 2 that is worth to check.

Following is the table of the partitions (You need to click the show/hide code output link to see it). The membership matrix (columns with name p*) is inferred by clue::cl_consensus() function with the SE method. Basically the value in the membership matrix represents the probability to belong to a certain group. The finall subgroup label for an item is determined with the group with highest probability it belongs to.

In get_classes() function, the entropy is calculated from the membership matrix and the silhouette score is calculated from the consensus matrix.

show/hide code output

cbind(get_classes(res, k = 2), get_membership(res, k = 2))
#>                                             class entropy silhouette p1 p2
#> lane1_3600STDY6077866_TTAGGCAT_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077867_TGACCACT_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077868_ACAGTGGT_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077869_GCCAATGT_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077870_CAGATCTG_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077871_ACTTGATG_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077872_GATCAGCG_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077873_TAGCTTGT_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077874_GGCTACAG_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077875_CTTGTACT_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077876_TGGTTGTT_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077877_TCTCGGTT_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077878_TAAGCGTT_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077879_TCCGTCTT_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077880_TGTACCTT_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077881_TTCTGTGT_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077882_TCTGCTGT_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077884_TCGAGCGT_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077885_TGATACGT_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077886_TGCATAGT_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077887_TTGACTCT_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077888_TGCGATCT_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077889_TTCCTGCT_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077890_TAGTGACT_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077891_TACAGGAT_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077892_TCCTCAAT_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077893_TGTGGTTG_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077894_TAGTCTTG_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077895_TTCCATTG_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077896_TCGAAGTG_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077897_TAACGCTG_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077898_TTGGTATG_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077900_TACTTCGG_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077901_TCTCACGG_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077902_TCAGGAGG_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077903_TAAGTTCG_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077905_TGTATGCG_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077906_TCATTGAG_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077907_TGGCTCAG_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077908_TATGCCAG_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077909_TCAGATTC_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077910_TACTAGTC_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077912_TGTCTATC_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077913_TATGTGGC_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077915_TCGTTAGC_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077916_TACCGAGC_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077917_TGTTCTCC_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077918_TTCGCACC_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077919_TTGCGTAC_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077920_TCTACGAC_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077921_TGACAGAC_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077922_TAGAACAC_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077923_TCATCCTA_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077924_TGCTGATA_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077925_TAGACGGA_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077926_TGTGAAGA_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077927_TCTCTTCA_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077928_TTGTTCCA_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077929_TGAAGCCA_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077930_TACCACCA_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077931_TGCGTGAA_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077932_GGTGAGTT_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077935_GACGGATT_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077936_GCAACATT_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077937_GGTCGTGT_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077938_GAATCTGT_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077939_GTACATCT_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077940_GAGGTGCT_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077941_GCATGGCT_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077942_GTTAGCCT_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077943_GTCGCTAT_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077944_GGAATGAT_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077945_GAGCCAAT_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077946_GCTCCTTG_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077947_GTAAGGTG_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077948_GAGGATGG_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077949_GTTGTCGG_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077950_GGATTAGG_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077951_GATAGAGG_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077952_GTGTGTCG_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077953_GCAATCCG_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077954_GACCTTAG_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077955_GCCTGTTC_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077956_GCACTGTC_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077957_GCTAACTC_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077958_GATTCATC_L001_15986_1     1       0          1  1  0
#> lane1_3600STDY6077959_GTCTTGGC_L001_15986_1     1       0          1  1  0
#> lane3_3600STDY6077962_TTAGGCAT_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6077963_TGACCACT_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6077964_ACAGTGGT_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6077965_GCCAATGT_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6077966_CAGATCTG_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6077967_ACTTGATG_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6077968_GATCAGCG_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6077969_TAGCTTGT_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6077970_GGCTACAG_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6077971_CTTGTACT_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6077972_TGGTTGTT_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6077973_TCTCGGTT_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6077974_TAAGCGTT_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6077975_TCCGTCTT_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6077976_TGTACCTT_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6077977_TTCTGTGT_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6077979_TTGGAGGT_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6077980_TCGAGCGT_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6077981_TGATACGT_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6077982_TGCATAGT_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6077983_TTGACTCT_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6077984_TGCGATCT_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6077985_TTCCTGCT_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6077986_TAGTGACT_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6077987_TACAGGAT_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6077988_TCCTCAAT_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6077989_TGTGGTTG_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6077990_TAGTCTTG_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6077991_TTCCATTG_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6077992_TCGAAGTG_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6077993_TAACGCTG_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6077994_TTGGTATG_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6077995_TGAACTGG_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6077996_TACTTCGG_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6077998_TCAGGAGG_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6077999_TAAGTTCG_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078000_TCCAGTCG_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078003_TGGCTCAG_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078004_TATGCCAG_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078005_TCAGATTC_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078006_TACTAGTC_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078007_TTCAGCTC_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078008_TGTCTATC_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078009_TATGTGGC_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078010_TTACTCGC_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078011_TCGTTAGC_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078012_TACCGAGC_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078013_TGTTCTCC_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078014_TTCGCACC_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078015_TTGCGTAC_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078016_TCTACGAC_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078017_TGACAGAC_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078018_TAGAACAC_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078019_TCATCCTA_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078020_TGCTGATA_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078021_TAGACGGA_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078022_TGTGAAGA_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078023_TCTCTTCA_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078024_TTGTTCCA_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078025_TGAAGCCA_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078026_TACCACCA_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078028_GGTGAGTT_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078029_GATCTCTT_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078030_GTGTCCTT_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078031_GACGGATT_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078032_GCAACATT_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078033_GGTCGTGT_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078034_GAATCTGT_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078035_GTACATCT_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078036_GAGGTGCT_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078037_GCATGGCT_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078038_GTTAGCCT_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078039_GTCGCTAT_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078040_GGAATGAT_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078041_GAGCCAAT_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078042_GCTCCTTG_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078043_GTAAGGTG_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078044_GAGGATGG_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078045_GTTGTCGG_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078046_GGATTAGG_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078047_GATAGAGG_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078048_GTGTGTCG_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078049_GCAATCCG_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078050_GACCTTAG_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078051_GCCTGTTC_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078052_GCACTGTC_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078053_GCTAACTC_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078054_GATTCATC_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078055_GTCTTGGC_L003_15987_1     2       0          1  0  1
#> lane1_3600STDY6167728_TGAACTGG_L001_17236_1     1       0          1  1  0

show/hide code output

cbind(get_classes(res, k = 3), get_membership(res, k = 3))
#>                                             class entropy silhouette   p1   p2   p3
#> lane1_3600STDY6077866_TTAGGCAT_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077867_TGACCACT_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077868_ACAGTGGT_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077869_GCCAATGT_L001_15986_1     1  0.0892     0.9869 0.98 0.00 0.02
#> lane1_3600STDY6077870_CAGATCTG_L001_15986_1     1  0.0892     0.9869 0.98 0.00 0.02
#> lane1_3600STDY6077871_ACTTGATG_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077872_GATCAGCG_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077873_TAGCTTGT_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077874_GGCTACAG_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077875_CTTGTACT_L001_15986_1     1  0.0892     0.9869 0.98 0.00 0.02
#> lane1_3600STDY6077876_TGGTTGTT_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077877_TCTCGGTT_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077878_TAAGCGTT_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077879_TCCGTCTT_L001_15986_1     1  0.0892     0.9869 0.98 0.00 0.02
#> lane1_3600STDY6077880_TGTACCTT_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077881_TTCTGTGT_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077882_TCTGCTGT_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077884_TCGAGCGT_L001_15986_1     1  0.0892     0.9869 0.98 0.00 0.02
#> lane1_3600STDY6077885_TGATACGT_L001_15986_1     1  0.0892     0.9869 0.98 0.00 0.02
#> lane1_3600STDY6077886_TGCATAGT_L001_15986_1     1  0.0892     0.9869 0.98 0.00 0.02
#> lane1_3600STDY6077887_TTGACTCT_L001_15986_1     1  0.0892     0.9869 0.98 0.00 0.02
#> lane1_3600STDY6077888_TGCGATCT_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077889_TTCCTGCT_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077890_TAGTGACT_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077891_TACAGGAT_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077892_TCCTCAAT_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077893_TGTGGTTG_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077894_TAGTCTTG_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077895_TTCCATTG_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077896_TCGAAGTG_L001_15986_1     1  0.3686     0.8706 0.86 0.00 0.14
#> lane1_3600STDY6077897_TAACGCTG_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077898_TTGGTATG_L001_15986_1     1  0.0892     0.9869 0.98 0.00 0.02
#> lane1_3600STDY6077900_TACTTCGG_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077901_TCTCACGG_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077902_TCAGGAGG_L001_15986_1     1  0.0892     0.9869 0.98 0.00 0.02
#> lane1_3600STDY6077903_TAAGTTCG_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077905_TGTATGCG_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077906_TCATTGAG_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077907_TGGCTCAG_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077908_TATGCCAG_L001_15986_1     1  0.0892     0.9869 0.98 0.00 0.02
#> lane1_3600STDY6077909_TCAGATTC_L001_15986_1     1  0.0892     0.9869 0.98 0.00 0.02
#> lane1_3600STDY6077910_TACTAGTC_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077912_TGTCTATC_L001_15986_1     1  0.0892     0.9869 0.98 0.00 0.02
#> lane1_3600STDY6077913_TATGTGGC_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077915_TCGTTAGC_L001_15986_1     1  0.0892     0.9869 0.98 0.00 0.02
#> lane1_3600STDY6077916_TACCGAGC_L001_15986_1     1  0.0892     0.9869 0.98 0.00 0.02
#> lane1_3600STDY6077917_TGTTCTCC_L001_15986_1     1  0.0892     0.9869 0.98 0.00 0.02
#> lane1_3600STDY6077918_TTCGCACC_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077919_TTGCGTAC_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077920_TCTACGAC_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077921_TGACAGAC_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077922_TAGAACAC_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077923_TCATCCTA_L001_15986_1     1  0.0892     0.9869 0.98 0.00 0.02
#> lane1_3600STDY6077924_TGCTGATA_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077925_TAGACGGA_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077926_TGTGAAGA_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077927_TCTCTTCA_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077928_TTGTTCCA_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077929_TGAAGCCA_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077930_TACCACCA_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077931_TGCGTGAA_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077932_GGTGAGTT_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077935_GACGGATT_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077936_GCAACATT_L001_15986_1     1  0.0892     0.9869 0.98 0.00 0.02
#> lane1_3600STDY6077937_GGTCGTGT_L001_15986_1     1  0.0892     0.9869 0.98 0.00 0.02
#> lane1_3600STDY6077938_GAATCTGT_L001_15986_1     1  0.0892     0.9869 0.98 0.00 0.02
#> lane1_3600STDY6077939_GTACATCT_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077940_GAGGTGCT_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077941_GCATGGCT_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077942_GTTAGCCT_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077943_GTCGCTAT_L001_15986_1     1  0.0892     0.9869 0.98 0.00 0.02
#> lane1_3600STDY6077944_GGAATGAT_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077945_GAGCCAAT_L001_15986_1     1  0.0892     0.9869 0.98 0.00 0.02
#> lane1_3600STDY6077946_GCTCCTTG_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077947_GTAAGGTG_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077948_GAGGATGG_L001_15986_1     1  0.0892     0.9869 0.98 0.00 0.02
#> lane1_3600STDY6077949_GTTGTCGG_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077950_GGATTAGG_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077951_GATAGAGG_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077952_GTGTGTCG_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077953_GCAATCCG_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077954_GACCTTAG_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077955_GCCTGTTC_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077956_GCACTGTC_L001_15986_1     1  0.0000     0.9934 1.00 0.00 0.00
#> lane1_3600STDY6077957_GCTAACTC_L001_15986_1     1  0.0892     0.9869 0.98 0.00 0.02
#> lane1_3600STDY6077958_GATTCATC_L001_15986_1     1  0.0892     0.9869 0.98 0.00 0.02
#> lane1_3600STDY6077959_GTCTTGGC_L001_15986_1     1  0.0892     0.9869 0.98 0.00 0.02
#> lane3_3600STDY6077962_TTAGGCAT_L003_15987_1     2  0.0000     0.9880 0.00 1.00 0.00
#> lane3_3600STDY6077963_TGACCACT_L003_15987_1     2  0.0000     0.9880 0.00 1.00 0.00
#> lane3_3600STDY6077964_ACAGTGGT_L003_15987_1     2  0.0000     0.9880 0.00 1.00 0.00
#> lane3_3600STDY6077965_GCCAATGT_L003_15987_1     2  0.0000     0.9880 0.00 1.00 0.00
#> lane3_3600STDY6077966_CAGATCTG_L003_15987_1     2  0.0000     0.9880 0.00 1.00 0.00
#> lane3_3600STDY6077967_ACTTGATG_L003_15987_1     2  0.0000     0.9880 0.00 1.00 0.00
#> lane3_3600STDY6077968_GATCAGCG_L003_15987_1     2  0.0000     0.9880 0.00 1.00 0.00
#> lane3_3600STDY6077969_TAGCTTGT_L003_15987_1     3  0.3686     0.9217 0.00 0.14 0.86
#> lane3_3600STDY6077970_GGCTACAG_L003_15987_1     3  0.0892     0.9155 0.00 0.02 0.98
#> lane3_3600STDY6077971_CTTGTACT_L003_15987_1     3  0.0892     0.9155 0.00 0.02 0.98
#> lane3_3600STDY6077972_TGGTTGTT_L003_15987_1     3  0.0892     0.9155 0.00 0.02 0.98
#> lane3_3600STDY6077973_TCTCGGTT_L003_15987_1     2  0.0000     0.9880 0.00 1.00 0.00
#> lane3_3600STDY6077974_TAAGCGTT_L003_15987_1     3  0.3340     0.9281 0.00 0.12 0.88
#> lane3_3600STDY6077975_TCCGTCTT_L003_15987_1     3  0.4002     0.9120 0.00 0.16 0.84
#> lane3_3600STDY6077976_TGTACCTT_L003_15987_1     3  0.0892     0.9155 0.00 0.02 0.98
#> lane3_3600STDY6077977_TTCTGTGT_L003_15987_1     2  0.0000     0.9880 0.00 1.00 0.00
#> lane3_3600STDY6077979_TTGGAGGT_L003_15987_1     2  0.0000     0.9880 0.00 1.00 0.00
#> lane3_3600STDY6077980_TCGAGCGT_L003_15987_1     2  0.0000     0.9880 0.00 1.00 0.00
#> lane3_3600STDY6077981_TGATACGT_L003_15987_1     3  0.4002     0.9120 0.00 0.16 0.84
#> lane3_3600STDY6077982_TGCATAGT_L003_15987_1     2  0.0000     0.9880 0.00 1.00 0.00
#> lane3_3600STDY6077983_TTGACTCT_L003_15987_1     3  0.3340     0.9281 0.00 0.12 0.88
#> lane3_3600STDY6077984_TGCGATCT_L003_15987_1     3  0.5397     0.7588 0.00 0.28 0.72
#> lane3_3600STDY6077985_TTCCTGCT_L003_15987_1     2  0.0000     0.9880 0.00 1.00 0.00
#> lane3_3600STDY6077986_TAGTGACT_L003_15987_1     3  0.4291     0.8928 0.00 0.18 0.82
#> lane3_3600STDY6077987_TACAGGAT_L003_15987_1     3  0.1529     0.9213 0.00 0.04 0.96
#> lane3_3600STDY6077988_TCCTCAAT_L003_15987_1     2  0.0000     0.9880 0.00 1.00 0.00
#> lane3_3600STDY6077989_TGTGGTTG_L003_15987_1     2  0.0000     0.9880 0.00 1.00 0.00
#> lane3_3600STDY6077990_TAGTCTTG_L003_15987_1     2  0.0000     0.9880 0.00 1.00 0.00
#> lane3_3600STDY6077991_TTCCATTG_L003_15987_1     3  0.3340     0.9281 0.00 0.12 0.88
#> lane3_3600STDY6077992_TCGAAGTG_L003_15987_1     2  0.0000     0.9880 0.00 1.00 0.00
#> lane3_3600STDY6077993_TAACGCTG_L003_15987_1     3  0.5216     0.7909 0.00 0.26 0.74
#> lane3_3600STDY6077994_TTGGTATG_L003_15987_1     3  0.1529     0.9213 0.00 0.04 0.96
#> lane3_3600STDY6077995_TGAACTGG_L003_15987_1     3  0.3340     0.9281 0.00 0.12 0.88
#> lane3_3600STDY6077996_TACTTCGG_L003_15987_1     2  0.0000     0.9880 0.00 1.00 0.00
#> lane3_3600STDY6077998_TCAGGAGG_L003_15987_1     3  0.2959     0.9276 0.00 0.10 0.90
#> lane3_3600STDY6077999_TAAGTTCG_L003_15987_1     3  0.4002     0.9120 0.00 0.16 0.84
#> lane3_3600STDY6078000_TCCAGTCG_L003_15987_1     2  0.0000     0.9880 0.00 1.00 0.00
#> lane3_3600STDY6078003_TGGCTCAG_L003_15987_1     2  0.0000     0.9880 0.00 1.00 0.00
#> lane3_3600STDY6078004_TATGCCAG_L003_15987_1     2  0.0000     0.9880 0.00 1.00 0.00
#> lane3_3600STDY6078005_TCAGATTC_L003_15987_1     3  0.3340     0.9281 0.00 0.12 0.88
#> lane3_3600STDY6078006_TACTAGTC_L003_15987_1     3  0.4002     0.9120 0.00 0.16 0.84
#> lane3_3600STDY6078007_TTCAGCTC_L003_15987_1     2  0.0000     0.9880 0.00 1.00 0.00
#> lane3_3600STDY6078008_TGTCTATC_L003_15987_1     2  0.0000     0.9880 0.00 1.00 0.00
#> lane3_3600STDY6078009_TATGTGGC_L003_15987_1     2  0.6192     0.0818 0.00 0.58 0.42
#> lane3_3600STDY6078010_TTACTCGC_L003_15987_1     2  0.0000     0.9880 0.00 1.00 0.00
#> lane3_3600STDY6078011_TCGTTAGC_L003_15987_1     2  0.0000     0.9880 0.00 1.00 0.00
#> lane3_3600STDY6078012_TACCGAGC_L003_15987_1     2  0.0000     0.9880 0.00 1.00 0.00
#> lane3_3600STDY6078013_TGTTCTCC_L003_15987_1     2  0.0000     0.9880 0.00 1.00 0.00
#> lane3_3600STDY6078014_TTCGCACC_L003_15987_1     2  0.0000     0.9880 0.00 1.00 0.00
#> lane3_3600STDY6078015_TTGCGTAC_L003_15987_1     2  0.0000     0.9880 0.00 1.00 0.00
#> lane3_3600STDY6078016_TCTACGAC_L003_15987_1     2  0.0000     0.9880 0.00 1.00 0.00
#> lane3_3600STDY6078017_TGACAGAC_L003_15987_1     2  0.0000     0.9880 0.00 1.00 0.00
#> lane3_3600STDY6078018_TAGAACAC_L003_15987_1     3  0.3686     0.9217 0.00 0.14 0.86
#> lane3_3600STDY6078019_TCATCCTA_L003_15987_1     3  0.1529     0.9213 0.00 0.04 0.96
#> lane3_3600STDY6078020_TGCTGATA_L003_15987_1     2  0.0000     0.9880 0.00 1.00 0.00
#> lane3_3600STDY6078021_TAGACGGA_L003_15987_1     2  0.0000     0.9880 0.00 1.00 0.00
#> lane3_3600STDY6078022_TGTGAAGA_L003_15987_1     3  0.1529     0.9213 0.00 0.04 0.96
#> lane3_3600STDY6078023_TCTCTTCA_L003_15987_1     3  0.4002     0.9120 0.00 0.16 0.84
#> lane3_3600STDY6078024_TTGTTCCA_L003_15987_1     2  0.0000     0.9880 0.00 1.00 0.00
#> lane3_3600STDY6078025_TGAAGCCA_L003_15987_1     2  0.0000     0.9880 0.00 1.00 0.00
#> lane3_3600STDY6078026_TACCACCA_L003_15987_1     3  0.4002     0.9120 0.00 0.16 0.84
#> lane3_3600STDY6078028_GGTGAGTT_L003_15987_1     2  0.0000     0.9880 0.00 1.00 0.00
#> lane3_3600STDY6078029_GATCTCTT_L003_15987_1     2  0.0000     0.9880 0.00 1.00 0.00
#> lane3_3600STDY6078030_GTGTCCTT_L003_15987_1     3  0.3340     0.9281 0.00 0.12 0.88
#> lane3_3600STDY6078031_GACGGATT_L003_15987_1     3  0.0892     0.9155 0.00 0.02 0.98
#> lane3_3600STDY6078032_GCAACATT_L003_15987_1     2  0.0000     0.9880 0.00 1.00 0.00
#> lane3_3600STDY6078033_GGTCGTGT_L003_15987_1     2  0.0000     0.9880 0.00 1.00 0.00
#> lane3_3600STDY6078034_GAATCTGT_L003_15987_1     2  0.0000     0.9880 0.00 1.00 0.00
#> lane3_3600STDY6078035_GTACATCT_L003_15987_1     3  0.4002     0.9120 0.00 0.16 0.84
#> lane3_3600STDY6078036_GAGGTGCT_L003_15987_1     3  0.4002     0.9120 0.00 0.16 0.84
#> lane3_3600STDY6078037_GCATGGCT_L003_15987_1     2  0.0000     0.9880 0.00 1.00 0.00
#> lane3_3600STDY6078038_GTTAGCCT_L003_15987_1     3  0.3686     0.9217 0.00 0.14 0.86
#> lane3_3600STDY6078039_GTCGCTAT_L003_15987_1     3  0.4002     0.9120 0.00 0.16 0.84
#> lane3_3600STDY6078040_GGAATGAT_L003_15987_1     2  0.0000     0.9880 0.00 1.00 0.00
#> lane3_3600STDY6078041_GAGCCAAT_L003_15987_1     2  0.0000     0.9880 0.00 1.00 0.00
#> lane3_3600STDY6078042_GCTCCTTG_L003_15987_1     3  0.3340     0.9281 0.00 0.12 0.88
#> lane3_3600STDY6078043_GTAAGGTG_L003_15987_1     3  0.0892     0.9155 0.00 0.02 0.98
#> lane3_3600STDY6078044_GAGGATGG_L003_15987_1     3  0.0892     0.9155 0.00 0.02 0.98
#> lane3_3600STDY6078045_GTTGTCGG_L003_15987_1     3  0.0892     0.9155 0.00 0.02 0.98
#> lane3_3600STDY6078046_GGATTAGG_L003_15987_1     3  0.0892     0.9155 0.00 0.02 0.98
#> lane3_3600STDY6078047_GATAGAGG_L003_15987_1     3  0.0892     0.9155 0.00 0.02 0.98
#> lane3_3600STDY6078048_GTGTGTCG_L003_15987_1     2  0.2537     0.8914 0.00 0.92 0.08
#> lane3_3600STDY6078049_GCAATCCG_L003_15987_1     2  0.0000     0.9880 0.00 1.00 0.00
#> lane3_3600STDY6078050_GACCTTAG_L003_15987_1     2  0.0000     0.9880 0.00 1.00 0.00
#> lane3_3600STDY6078051_GCCTGTTC_L003_15987_1     2  0.0000     0.9880 0.00 1.00 0.00
#> lane3_3600STDY6078052_GCACTGTC_L003_15987_1     2  0.0000     0.9880 0.00 1.00 0.00
#> lane3_3600STDY6078053_GCTAACTC_L003_15987_1     3  0.0892     0.9155 0.00 0.02 0.98
#> lane3_3600STDY6078054_GATTCATC_L003_15987_1     3  0.0892     0.9155 0.00 0.02 0.98
#> lane3_3600STDY6078055_GTCTTGGC_L003_15987_1     3  0.0892     0.9155 0.00 0.02 0.98
#> lane1_3600STDY6167728_TGAACTGG_L001_17236_1     1  0.0892     0.9869 0.98 0.00 0.02

show/hide code output

cbind(get_classes(res, k = 4), get_membership(res, k = 4))
#>                                             class entropy silhouette   p1   p2   p3   p4
#> lane1_3600STDY6077866_TTAGGCAT_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077867_TGACCACT_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077868_ACAGTGGT_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077869_GCCAATGT_L001_15986_1     1  0.4277      0.670 0.72 0.00 0.00 0.28
#> lane1_3600STDY6077870_CAGATCTG_L001_15986_1     1  0.4134      0.694 0.74 0.00 0.00 0.26
#> lane1_3600STDY6077871_ACTTGATG_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077872_GATCAGCG_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077873_TAGCTTGT_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077874_GGCTACAG_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077875_CTTGTACT_L001_15986_1     1  0.4522      0.617 0.68 0.00 0.00 0.32
#> lane1_3600STDY6077876_TGGTTGTT_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077877_TCTCGGTT_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077878_TAAGCGTT_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077879_TCCGTCTT_L001_15986_1     1  0.4522      0.617 0.68 0.00 0.00 0.32
#> lane1_3600STDY6077880_TGTACCTT_L001_15986_1     1  0.0707      0.891 0.98 0.00 0.00 0.02
#> lane1_3600STDY6077881_TTCTGTGT_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077882_TCTGCTGT_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077884_TCGAGCGT_L001_15986_1     4  0.1211      0.947 0.04 0.00 0.00 0.96
#> lane1_3600STDY6077885_TGATACGT_L001_15986_1     4  0.2921      0.866 0.14 0.00 0.00 0.86
#> lane1_3600STDY6077886_TGCATAGT_L001_15986_1     4  0.1211      0.947 0.04 0.00 0.00 0.96
#> lane1_3600STDY6077887_TTGACTCT_L001_15986_1     1  0.4522      0.617 0.68 0.00 0.00 0.32
#> lane1_3600STDY6077888_TGCGATCT_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077889_TTCCTGCT_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077890_TAGTGACT_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077891_TACAGGAT_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077892_TCCTCAAT_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077893_TGTGGTTG_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077894_TAGTCTTG_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077895_TTCCATTG_L001_15986_1     1  0.2011      0.855 0.92 0.00 0.00 0.08
#> lane1_3600STDY6077896_TCGAAGTG_L001_15986_1     4  0.0000      0.897 0.00 0.00 0.00 1.00
#> lane1_3600STDY6077897_TAACGCTG_L001_15986_1     1  0.1211      0.880 0.96 0.00 0.00 0.04
#> lane1_3600STDY6077898_TTGGTATG_L001_15986_1     1  0.3172      0.794 0.84 0.00 0.00 0.16
#> lane1_3600STDY6077900_TACTTCGG_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077901_TCTCACGG_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077902_TCAGGAGG_L001_15986_1     1  0.4522      0.617 0.68 0.00 0.00 0.32
#> lane1_3600STDY6077903_TAAGTTCG_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077905_TGTATGCG_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077906_TCATTGAG_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077907_TGGCTCAG_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077908_TATGCCAG_L001_15986_1     4  0.2647      0.892 0.12 0.00 0.00 0.88
#> lane1_3600STDY6077909_TCAGATTC_L001_15986_1     1  0.4855      0.461 0.60 0.00 0.00 0.40
#> lane1_3600STDY6077910_TACTAGTC_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077912_TGTCTATC_L001_15986_1     1  0.4522      0.617 0.68 0.00 0.00 0.32
#> lane1_3600STDY6077913_TATGTGGC_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077915_TCGTTAGC_L001_15986_1     1  0.4855      0.461 0.60 0.00 0.00 0.40
#> lane1_3600STDY6077916_TACCGAGC_L001_15986_1     1  0.3801      0.737 0.78 0.00 0.00 0.22
#> lane1_3600STDY6077917_TGTTCTCC_L001_15986_1     1  0.4406      0.646 0.70 0.00 0.00 0.30
#> lane1_3600STDY6077918_TTCGCACC_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077919_TTGCGTAC_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077920_TCTACGAC_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077921_TGACAGAC_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077922_TAGAACAC_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077923_TCATCCTA_L001_15986_1     1  0.4522      0.617 0.68 0.00 0.00 0.32
#> lane1_3600STDY6077924_TGCTGATA_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077925_TAGACGGA_L001_15986_1     1  0.1211      0.880 0.96 0.00 0.00 0.04
#> lane1_3600STDY6077926_TGTGAAGA_L001_15986_1     1  0.2921      0.810 0.86 0.00 0.00 0.14
#> lane1_3600STDY6077927_TCTCTTCA_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077928_TTGTTCCA_L001_15986_1     1  0.0707      0.891 0.98 0.00 0.00 0.02
#> lane1_3600STDY6077929_TGAAGCCA_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077930_TACCACCA_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077931_TGCGTGAA_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077932_GGTGAGTT_L001_15986_1     1  0.0707      0.891 0.98 0.00 0.00 0.02
#> lane1_3600STDY6077935_GACGGATT_L001_15986_1     1  0.0707      0.891 0.98 0.00 0.00 0.02
#> lane1_3600STDY6077936_GCAACATT_L001_15986_1     4  0.1211      0.947 0.04 0.00 0.00 0.96
#> lane1_3600STDY6077937_GGTCGTGT_L001_15986_1     1  0.4522      0.617 0.68 0.00 0.00 0.32
#> lane1_3600STDY6077938_GAATCTGT_L001_15986_1     1  0.4522      0.617 0.68 0.00 0.00 0.32
#> lane1_3600STDY6077939_GTACATCT_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077940_GAGGTGCT_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077941_GCATGGCT_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077942_GTTAGCCT_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077943_GTCGCTAT_L001_15986_1     1  0.4522      0.617 0.68 0.00 0.00 0.32
#> lane1_3600STDY6077944_GGAATGAT_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077945_GAGCCAAT_L001_15986_1     1  0.4977      0.296 0.54 0.00 0.00 0.46
#> lane1_3600STDY6077946_GCTCCTTG_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077947_GTAAGGTG_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077948_GAGGATGG_L001_15986_1     4  0.1211      0.947 0.04 0.00 0.00 0.96
#> lane1_3600STDY6077949_GTTGTCGG_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077950_GGATTAGG_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077951_GATAGAGG_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077952_GTGTGTCG_L001_15986_1     1  0.2345      0.841 0.90 0.00 0.00 0.10
#> lane1_3600STDY6077953_GCAATCCG_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077954_GACCTTAG_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077955_GCCTGTTC_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077956_GCACTGTC_L001_15986_1     1  0.0000      0.900 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077957_GCTAACTC_L001_15986_1     1  0.3172      0.794 0.84 0.00 0.00 0.16
#> lane1_3600STDY6077958_GATTCATC_L001_15986_1     1  0.4522      0.617 0.68 0.00 0.00 0.32
#> lane1_3600STDY6077959_GTCTTGGC_L001_15986_1     1  0.4713      0.546 0.64 0.00 0.00 0.36
#> lane3_3600STDY6077962_TTAGGCAT_L003_15987_1     2  0.0000      0.979 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077963_TGACCACT_L003_15987_1     2  0.0000      0.979 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077964_ACAGTGGT_L003_15987_1     2  0.0000      0.979 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077965_GCCAATGT_L003_15987_1     2  0.0000      0.979 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077966_CAGATCTG_L003_15987_1     2  0.0000      0.979 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077967_ACTTGATG_L003_15987_1     2  0.0000      0.979 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077968_GATCAGCG_L003_15987_1     2  0.0000      0.979 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077969_TAGCTTGT_L003_15987_1     3  0.2011      0.906 0.00 0.08 0.92 0.00
#> lane3_3600STDY6077970_GGCTACAG_L003_15987_1     3  0.1211      0.900 0.00 0.00 0.96 0.04
#> lane3_3600STDY6077971_CTTGTACT_L003_15987_1     3  0.1211      0.900 0.00 0.00 0.96 0.04
#> lane3_3600STDY6077972_TGGTTGTT_L003_15987_1     3  0.0707      0.905 0.00 0.00 0.98 0.02
#> lane3_3600STDY6077973_TCTCGGTT_L003_15987_1     2  0.0000      0.979 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077974_TAAGCGTT_L003_15987_1     3  0.2011      0.906 0.00 0.08 0.92 0.00
#> lane3_3600STDY6077975_TCCGTCTT_L003_15987_1     3  0.3172      0.847 0.00 0.16 0.84 0.00
#> lane3_3600STDY6077976_TGTACCTT_L003_15987_1     3  0.1211      0.900 0.00 0.00 0.96 0.04
#> lane3_3600STDY6077977_TTCTGTGT_L003_15987_1     2  0.0000      0.979 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077979_TTGGAGGT_L003_15987_1     2  0.0000      0.979 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077980_TCGAGCGT_L003_15987_1     2  0.0000      0.979 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077981_TGATACGT_L003_15987_1     3  0.2647      0.883 0.00 0.12 0.88 0.00
#> lane3_3600STDY6077982_TGCATAGT_L003_15987_1     2  0.0000      0.979 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077983_TTGACTCT_L003_15987_1     3  0.1637      0.912 0.00 0.06 0.94 0.00
#> lane3_3600STDY6077984_TGCGATCT_L003_15987_1     3  0.4134      0.711 0.00 0.26 0.74 0.00
#> lane3_3600STDY6077985_TTCCTGCT_L003_15987_1     2  0.0707      0.961 0.00 0.98 0.02 0.00
#> lane3_3600STDY6077986_TAGTGACT_L003_15987_1     3  0.2921      0.867 0.00 0.14 0.86 0.00
#> lane3_3600STDY6077987_TACAGGAT_L003_15987_1     3  0.0000      0.908 0.00 0.00 1.00 0.00
#> lane3_3600STDY6077988_TCCTCAAT_L003_15987_1     2  0.0707      0.961 0.00 0.98 0.02 0.00
#> lane3_3600STDY6077989_TGTGGTTG_L003_15987_1     2  0.0000      0.979 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077990_TAGTCTTG_L003_15987_1     2  0.0000      0.979 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077991_TTCCATTG_L003_15987_1     3  0.1211      0.915 0.00 0.04 0.96 0.00
#> lane3_3600STDY6077992_TCGAAGTG_L003_15987_1     2  0.0000      0.979 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077993_TAACGCTG_L003_15987_1     3  0.4134      0.713 0.00 0.26 0.74 0.00
#> lane3_3600STDY6077994_TTGGTATG_L003_15987_1     3  0.0000      0.908 0.00 0.00 1.00 0.00
#> lane3_3600STDY6077995_TGAACTGG_L003_15987_1     3  0.1211      0.914 0.00 0.04 0.96 0.00
#> lane3_3600STDY6077996_TACTTCGG_L003_15987_1     2  0.0000      0.979 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077998_TCAGGAGG_L003_15987_1     3  0.0707      0.913 0.00 0.02 0.98 0.00
#> lane3_3600STDY6077999_TAAGTTCG_L003_15987_1     3  0.3172      0.847 0.00 0.16 0.84 0.00
#> lane3_3600STDY6078000_TCCAGTCG_L003_15987_1     2  0.0000      0.979 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078003_TGGCTCAG_L003_15987_1     2  0.0000      0.979 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078004_TATGCCAG_L003_15987_1     2  0.0000      0.979 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078005_TCAGATTC_L003_15987_1     3  0.1637      0.912 0.00 0.06 0.94 0.00
#> lane3_3600STDY6078006_TACTAGTC_L003_15987_1     3  0.2345      0.897 0.00 0.10 0.90 0.00
#> lane3_3600STDY6078007_TTCAGCTC_L003_15987_1     2  0.1637      0.920 0.00 0.94 0.06 0.00
#> lane3_3600STDY6078008_TGTCTATC_L003_15987_1     2  0.0000      0.979 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078009_TATGTGGC_L003_15987_1     2  0.5000     -0.147 0.00 0.50 0.50 0.00
#> lane3_3600STDY6078010_TTACTCGC_L003_15987_1     2  0.0000      0.979 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078011_TCGTTAGC_L003_15987_1     2  0.0000      0.979 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078012_TACCGAGC_L003_15987_1     2  0.0000      0.979 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078013_TGTTCTCC_L003_15987_1     2  0.1637      0.920 0.00 0.94 0.06 0.00
#> lane3_3600STDY6078014_TTCGCACC_L003_15987_1     2  0.0000      0.979 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078015_TTGCGTAC_L003_15987_1     2  0.0000      0.979 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078016_TCTACGAC_L003_15987_1     2  0.0000      0.979 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078017_TGACAGAC_L003_15987_1     2  0.1211      0.942 0.00 0.96 0.04 0.00
#> lane3_3600STDY6078018_TAGAACAC_L003_15987_1     3  0.2011      0.907 0.00 0.08 0.92 0.00
#> lane3_3600STDY6078019_TCATCCTA_L003_15987_1     3  0.0000      0.908 0.00 0.00 1.00 0.00
#> lane3_3600STDY6078020_TGCTGATA_L003_15987_1     2  0.0000      0.979 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078021_TAGACGGA_L003_15987_1     2  0.0000      0.979 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078022_TGTGAAGA_L003_15987_1     3  0.0000      0.908 0.00 0.00 1.00 0.00
#> lane3_3600STDY6078023_TCTCTTCA_L003_15987_1     3  0.2921      0.867 0.00 0.14 0.86 0.00
#> lane3_3600STDY6078024_TTGTTCCA_L003_15987_1     2  0.0000      0.979 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078025_TGAAGCCA_L003_15987_1     2  0.0000      0.979 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078026_TACCACCA_L003_15987_1     3  0.2647      0.883 0.00 0.12 0.88 0.00
#> lane3_3600STDY6078028_GGTGAGTT_L003_15987_1     2  0.0000      0.979 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078029_GATCTCTT_L003_15987_1     2  0.0000      0.979 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078030_GTGTCCTT_L003_15987_1     3  0.1211      0.914 0.00 0.04 0.96 0.00
#> lane3_3600STDY6078031_GACGGATT_L003_15987_1     3  0.0707      0.905 0.00 0.00 0.98 0.02
#> lane3_3600STDY6078032_GCAACATT_L003_15987_1     2  0.0000      0.979 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078033_GGTCGTGT_L003_15987_1     2  0.0000      0.979 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078034_GAATCTGT_L003_15987_1     2  0.0000      0.979 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078035_GTACATCT_L003_15987_1     3  0.2345      0.896 0.00 0.10 0.90 0.00
#> lane3_3600STDY6078036_GAGGTGCT_L003_15987_1     3  0.2647      0.884 0.00 0.12 0.88 0.00
#> lane3_3600STDY6078037_GCATGGCT_L003_15987_1     2  0.0000      0.979 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078038_GTTAGCCT_L003_15987_1     3  0.2011      0.906 0.00 0.08 0.92 0.00
#> lane3_3600STDY6078039_GTCGCTAT_L003_15987_1     3  0.3172      0.847 0.00 0.16 0.84 0.00
#> lane3_3600STDY6078040_GGAATGAT_L003_15987_1     2  0.0000      0.979 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078041_GAGCCAAT_L003_15987_1     2  0.0000      0.979 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078042_GCTCCTTG_L003_15987_1     3  0.0707      0.913 0.00 0.02 0.98 0.00
#> lane3_3600STDY6078043_GTAAGGTG_L003_15987_1     3  0.1211      0.900 0.00 0.00 0.96 0.04
#> lane3_3600STDY6078044_GAGGATGG_L003_15987_1     3  0.1211      0.900 0.00 0.00 0.96 0.04
#> lane3_3600STDY6078045_GTTGTCGG_L003_15987_1     3  0.1211      0.900 0.00 0.00 0.96 0.04
#> lane3_3600STDY6078046_GGATTAGG_L003_15987_1     3  0.1211      0.900 0.00 0.00 0.96 0.04
#> lane3_3600STDY6078047_GATAGAGG_L003_15987_1     3  0.1211      0.900 0.00 0.00 0.96 0.04
#> lane3_3600STDY6078048_GTGTGTCG_L003_15987_1     2  0.3172      0.789 0.00 0.84 0.16 0.00
#> lane3_3600STDY6078049_GCAATCCG_L003_15987_1     2  0.0000      0.979 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078050_GACCTTAG_L003_15987_1     2  0.0000      0.979 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078051_GCCTGTTC_L003_15987_1     2  0.0000      0.979 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078052_GCACTGTC_L003_15987_1     2  0.0000      0.979 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078053_GCTAACTC_L003_15987_1     3  0.0000      0.908 0.00 0.00 1.00 0.00
#> lane3_3600STDY6078054_GATTCATC_L003_15987_1     3  0.1211      0.900 0.00 0.00 0.96 0.04
#> lane3_3600STDY6078055_GTCTTGGC_L003_15987_1     3  0.1211      0.900 0.00 0.00 0.96 0.04
#> lane1_3600STDY6167728_TGAACTGG_L001_17236_1     1  0.4624      0.583 0.66 0.00 0.00 0.34

Heatmaps for the consensus matrix. It visualizes the probability of two samples to be in a same group.

consensus_heatmap(res, k = 2)

plot of chunk tab-node-012-consensus-heatmap-1

consensus_heatmap(res, k = 3)

plot of chunk tab-node-012-consensus-heatmap-2

consensus_heatmap(res, k = 4)

plot of chunk tab-node-012-consensus-heatmap-3

Heatmaps for the membership of samples in all partitions to see how consistent they are:

membership_heatmap(res, k = 2)

plot of chunk tab-node-012-membership-heatmap-1

membership_heatmap(res, k = 3)

plot of chunk tab-node-012-membership-heatmap-2

membership_heatmap(res, k = 4)

plot of chunk tab-node-012-membership-heatmap-3

As soon as the classes for columns are determined, the signatures that are significantly different between subgroups can be looked for. Following are the heatmaps for signatures.

Signature heatmaps where rows are scaled:

get_signatures(res, k = 2)

plot of chunk tab-node-012-get-signatures-1

get_signatures(res, k = 3)

plot of chunk tab-node-012-get-signatures-2

get_signatures(res, k = 4)

plot of chunk tab-node-012-get-signatures-3

Signature heatmaps where rows are not scaled:

get_signatures(res, k = 2, scale_rows = FALSE)

plot of chunk tab-node-012-get-signatures-no-scale-1

get_signatures(res, k = 3, scale_rows = FALSE)

plot of chunk tab-node-012-get-signatures-no-scale-2

get_signatures(res, k = 4, scale_rows = FALSE)

plot of chunk tab-node-012-get-signatures-no-scale-3

Compare the overlap of signatures from different k:

compare_signatures(res)

plot of chunk node-012-signature_compare

get_signature() returns a data frame invisibly. To get the list of signatures, the function call should be assigned to a variable explicitly. In following code, if plot argument is set to FALSE, no heatmap is plotted while only the differential analysis is performed.

# code only for demonstration
tb = get_signature(res, k = ..., plot = FALSE)

An example of the output of tb is:

#>   which_row         fdr    mean_1    mean_2 scaled_mean_1 scaled_mean_2 km
#> 1        38 0.042760348  8.373488  9.131774    -0.5533452     0.5164555  1
#> 2        40 0.018707592  7.106213  8.469186    -0.6173731     0.5762149  1
#> 3        55 0.019134737 10.221463 11.207825    -0.6159697     0.5749050  1
#> 4        59 0.006059896  5.921854  7.869574    -0.6899429     0.6439467  1
#> 5        60 0.018055526  8.928898 10.211722    -0.6204761     0.5791110  1
#> 6        98 0.009384629 15.714769 14.887706     0.6635654    -0.6193277  2
...

The columns in tb are:

  1. which_row: row indices corresponding to the input matrix.
  2. fdr: FDR for the differential test.
  3. mean_x: The mean value in group x.
  4. scaled_mean_x: The mean value in group x after rows are scaled.
  5. km: Row groups if k-means clustering is applied to rows (which is done by automatically selecting number of clusters).

If there are too many signatures, top_signatures = ... can be set to only show the signatures with the highest FDRs:

# code only for demonstration
# e.g. to show the top 500 most significant rows
tb = get_signature(res, k = ..., top_signatures = 500)

If the signatures are defined as these which are uniquely high in current group, diff_method argument can be set to "uniquely_high_in_one_group":

# code only for demonstration
tb = get_signature(res, k = ..., diff_method = "uniquely_high_in_one_group")

UMAP plot which shows how samples are separated.

dimension_reduction(res, k = 2, method = "UMAP")

plot of chunk tab-node-012-dimension-reduction-1

dimension_reduction(res, k = 3, method = "UMAP")

plot of chunk tab-node-012-dimension-reduction-2

dimension_reduction(res, k = 4, method = "UMAP")

plot of chunk tab-node-012-dimension-reduction-3

Following heatmap shows how subgroups are split when increasing k:

collect_classes(res)

plot of chunk node-012-collect-classes

Test correlation between subgroups and known annotations. If the known annotation is numeric, one-way ANOVA test is applied, and if the known annotation is discrete, chi-squared contingency table test is applied.

test_to_known_factors(res)
#>             n_sample phenotype(p-value) k
#> ATC:skmeans      177           1.62e-39 2
#> ATC:skmeans      176           6.05e-39 3
#> ATC:skmeans      173           2.86e-37 4

If matrix rows can be associated to genes, consider to use functional_enrichment(res, ...) to perform function enrichment for the signature genes. See this vignette for more detailed explanations.


Node0121

Parent node: Node012. Child nodes: Node01211-leaf , Node01212-leaf , Node01231-leaf , Node01232-leaf , Node01233-leaf , Node02221-leaf , Node02222-leaf , Node03421-leaf , Node03422-leaf , Node03423-leaf .

The object with results only for a single top-value method and a single partitioning method can be extracted as:

res = res_rh["0121"]

A summary of res and all the functions that can be applied to it:

res
#> A 'ConsensusPartition' object with k = 2, 3, 4.
#>   On a matrix with 16336 rows and 88 columns.
#>   Top rows (1634) are extracted by 'ATC' method.
#>   Subgroups are detected by 'skmeans' method.
#>   Performed in total 150 partitions by row resampling.
#>   Best k for subgroups seems to be 3.
#> 
#> Following methods can be applied to this 'ConsensusPartition' object:
#>  [1] "cola_report"             "collect_classes"         "collect_plots"          
#>  [4] "collect_stats"           "colnames"                "compare_partitions"     
#>  [7] "compare_signatures"      "consensus_heatmap"       "dimension_reduction"    
#> [10] "functional_enrichment"   "get_anno_col"            "get_anno"               
#> [13] "get_classes"             "get_consensus"           "get_matrix"             
#> [16] "get_membership"          "get_param"               "get_signatures"         
#> [19] "get_stats"               "is_best_k"               "is_stable_k"            
#> [22] "membership_heatmap"      "ncol"                    "nrow"                   
#> [25] "plot_ecdf"               "predict_classes"         "rownames"               
#> [28] "select_partition_number" "show"                    "suggest_best_k"         
#> [31] "test_to_known_factors"   "top_rows_heatmap"

collect_plots() function collects all the plots made from res for all k (number of subgroups) into one single page to provide an easy and fast comparison between different k.

collect_plots(res)

plot of chunk node-0121-collect-plots

The plots are:

All the plots in panels can be made by individual functions and they are plotted later in this section.

select_partition_number() produces several plots showing different statistics for choosing “optimized” k. There are following statistics:

The detailed explanations of these statistics can be found in the cola vignette.

Generally speaking, higher 1-PAC score, higher mean silhouette score or higher concordance corresponds to better partition. Rand index and Jaccard index measure how similar the current partition is compared to partition with k-1. If they are too similar, we won't accept k is better than k-1.

select_partition_number(res)

plot of chunk node-0121-select-partition-number

The numeric values for all these statistics can be obtained by get_stats().

get_stats(res)
#>   k 1-PAC mean_silhouette concordance area_increased  Rand Jaccard
#> 2 2 1.000           0.973       0.989          0.454 0.553   0.553
#> 3 3 0.977           0.933       0.969          0.299 0.852   0.734
#> 4 4 0.715           0.761       0.884          0.131 0.908   0.786

suggest_best_k() suggests the best \(k\) based on these statistics. The rules are as follows:

suggest_best_k(res)
#> [1] 3
#> attr(,"optional")
#> [1] 2

There is also optional best \(k\) = 2 that is worth to check.

Following is the table of the partitions (You need to click the show/hide code output link to see it). The membership matrix (columns with name p*) is inferred by clue::cl_consensus() function with the SE method. Basically the value in the membership matrix represents the probability to belong to a certain group. The finall subgroup label for an item is determined with the group with highest probability it belongs to.

In get_classes() function, the entropy is calculated from the membership matrix and the silhouette score is calculated from the consensus matrix.

show/hide code output

cbind(get_classes(res, k = 2), get_membership(res, k = 2))
#>                                             class entropy silhouette   p1   p2
#> lane1_3600STDY6077866_TTAGGCAT_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077867_TGACCACT_L001_15986_1     1   0.141      0.967 0.98 0.02
#> lane1_3600STDY6077868_ACAGTGGT_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077869_GCCAATGT_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077870_CAGATCTG_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077871_ACTTGATG_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077872_GATCAGCG_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077873_TAGCTTGT_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077874_GGCTACAG_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077875_CTTGTACT_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077876_TGGTTGTT_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077877_TCTCGGTT_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077878_TAAGCGTT_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077879_TCCGTCTT_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077880_TGTACCTT_L001_15986_1     1   0.242      0.948 0.96 0.04
#> lane1_3600STDY6077881_TTCTGTGT_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077882_TCTGCTGT_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077884_TCGAGCGT_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077885_TGATACGT_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077886_TGCATAGT_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077887_TTGACTCT_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077888_TGCGATCT_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077889_TTCCTGCT_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077890_TAGTGACT_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077891_TACAGGAT_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077892_TCCTCAAT_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077893_TGTGGTTG_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077894_TAGTCTTG_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077895_TTCCATTG_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077896_TCGAAGTG_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077897_TAACGCTG_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077898_TTGGTATG_L001_15986_1     1   0.971      0.342 0.60 0.40
#> lane1_3600STDY6077900_TACTTCGG_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077901_TCTCACGG_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077902_TCAGGAGG_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077903_TAAGTTCG_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077905_TGTATGCG_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077906_TCATTGAG_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077907_TGGCTCAG_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077908_TATGCCAG_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077909_TCAGATTC_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077910_TACTAGTC_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077912_TGTCTATC_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077913_TATGTGGC_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077915_TCGTTAGC_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077916_TACCGAGC_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077917_TGTTCTCC_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077918_TTCGCACC_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077919_TTGCGTAC_L001_15986_1     1   0.971      0.348 0.60 0.40
#> lane1_3600STDY6077920_TCTACGAC_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077921_TGACAGAC_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077922_TAGAACAC_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077923_TCATCCTA_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077924_TGCTGATA_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077925_TAGACGGA_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077926_TGTGAAGA_L001_15986_1     1   0.141      0.967 0.98 0.02
#> lane1_3600STDY6077927_TCTCTTCA_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077928_TTGTTCCA_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077929_TGAAGCCA_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077930_TACCACCA_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077931_TGCGTGAA_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077932_GGTGAGTT_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077935_GACGGATT_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077936_GCAACATT_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077937_GGTCGTGT_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077938_GAATCTGT_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077939_GTACATCT_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077940_GAGGTGCT_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077941_GCATGGCT_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077942_GTTAGCCT_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077943_GTCGCTAT_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077944_GGAATGAT_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077945_GAGCCAAT_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077946_GCTCCTTG_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077947_GTAAGGTG_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077948_GAGGATGG_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077949_GTTGTCGG_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077950_GGATTAGG_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077951_GATAGAGG_L001_15986_1     1   0.141      0.967 0.98 0.02
#> lane1_3600STDY6077952_GTGTGTCG_L001_15986_1     1   0.242      0.948 0.96 0.04
#> lane1_3600STDY6077953_GCAATCCG_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077954_GACCTTAG_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077955_GCCTGTTC_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077956_GCACTGTC_L001_15986_1     1   0.000      0.984 1.00 0.00
#> lane1_3600STDY6077957_GCTAACTC_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077958_GATTCATC_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6077959_GTCTTGGC_L001_15986_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6167728_TGAACTGG_L001_17236_1     2   0.000      1.000 0.00 1.00

show/hide code output

cbind(get_classes(res, k = 3), get_membership(res, k = 3))
#>                                             class entropy silhouette   p1   p2   p3
#> lane1_3600STDY6077866_TTAGGCAT_L001_15986_1     1  0.0000      0.975 1.00 0.00 0.00
#> lane1_3600STDY6077867_TGACCACT_L001_15986_1     3  0.0000      0.871 0.00 0.00 1.00
#> lane1_3600STDY6077868_ACAGTGGT_L001_15986_1     1  0.0000      0.975 1.00 0.00 0.00
#> lane1_3600STDY6077869_GCCAATGT_L001_15986_1     1  0.2537      0.902 0.92 0.00 0.08
#> lane1_3600STDY6077870_CAGATCTG_L001_15986_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6077871_ACTTGATG_L001_15986_1     1  0.4796      0.698 0.78 0.00 0.22
#> lane1_3600STDY6077872_GATCAGCG_L001_15986_1     1  0.0000      0.975 1.00 0.00 0.00
#> lane1_3600STDY6077873_TAGCTTGT_L001_15986_1     1  0.0000      0.975 1.00 0.00 0.00
#> lane1_3600STDY6077874_GGCTACAG_L001_15986_1     1  0.0000      0.975 1.00 0.00 0.00
#> lane1_3600STDY6077875_CTTGTACT_L001_15986_1     2  0.1529      0.956 0.00 0.96 0.04
#> lane1_3600STDY6077876_TGGTTGTT_L001_15986_1     1  0.0000      0.975 1.00 0.00 0.00
#> lane1_3600STDY6077877_TCTCGGTT_L001_15986_1     1  0.0000      0.975 1.00 0.00 0.00
#> lane1_3600STDY6077878_TAAGCGTT_L001_15986_1     1  0.0000      0.975 1.00 0.00 0.00
#> lane1_3600STDY6077879_TCCGTCTT_L001_15986_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6077880_TGTACCTT_L001_15986_1     3  0.0000      0.871 0.00 0.00 1.00
#> lane1_3600STDY6077881_TTCTGTGT_L001_15986_1     1  0.0000      0.975 1.00 0.00 0.00
#> lane1_3600STDY6077882_TCTGCTGT_L001_15986_1     1  0.0000      0.975 1.00 0.00 0.00
#> lane1_3600STDY6077884_TCGAGCGT_L001_15986_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6077885_TGATACGT_L001_15986_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6077886_TGCATAGT_L001_15986_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6077887_TTGACTCT_L001_15986_1     2  0.1529      0.956 0.00 0.96 0.04
#> lane1_3600STDY6077888_TGCGATCT_L001_15986_1     1  0.0000      0.975 1.00 0.00 0.00
#> lane1_3600STDY6077889_TTCCTGCT_L001_15986_1     1  0.0000      0.975 1.00 0.00 0.00
#> lane1_3600STDY6077890_TAGTGACT_L001_15986_1     1  0.0000      0.975 1.00 0.00 0.00
#> lane1_3600STDY6077891_TACAGGAT_L001_15986_1     1  0.0000      0.975 1.00 0.00 0.00
#> lane1_3600STDY6077892_TCCTCAAT_L001_15986_1     1  0.0000      0.975 1.00 0.00 0.00
#> lane1_3600STDY6077893_TGTGGTTG_L001_15986_1     1  0.0000      0.975 1.00 0.00 0.00
#> lane1_3600STDY6077894_TAGTCTTG_L001_15986_1     1  0.0000      0.975 1.00 0.00 0.00
#> lane1_3600STDY6077895_TTCCATTG_L001_15986_1     2  0.0892      0.971 0.00 0.98 0.02
#> lane1_3600STDY6077896_TCGAAGTG_L001_15986_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6077897_TAACGCTG_L001_15986_1     3  0.5835      0.443 0.00 0.34 0.66
#> lane1_3600STDY6077898_TTGGTATG_L001_15986_1     1  0.8202      0.404 0.62 0.26 0.12
#> lane1_3600STDY6077900_TACTTCGG_L001_15986_1     1  0.0000      0.975 1.00 0.00 0.00
#> lane1_3600STDY6077901_TCTCACGG_L001_15986_1     1  0.0000      0.975 1.00 0.00 0.00
#> lane1_3600STDY6077902_TCAGGAGG_L001_15986_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6077903_TAAGTTCG_L001_15986_1     1  0.0892      0.960 0.98 0.00 0.02
#> lane1_3600STDY6077905_TGTATGCG_L001_15986_1     1  0.0000      0.975 1.00 0.00 0.00
#> lane1_3600STDY6077906_TCATTGAG_L001_15986_1     1  0.0000      0.975 1.00 0.00 0.00
#> lane1_3600STDY6077907_TGGCTCAG_L001_15986_1     3  0.3686      0.821 0.14 0.00 0.86
#> lane1_3600STDY6077908_TATGCCAG_L001_15986_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6077909_TCAGATTC_L001_15986_1     2  0.1529      0.957 0.00 0.96 0.04
#> lane1_3600STDY6077910_TACTAGTC_L001_15986_1     1  0.0000      0.975 1.00 0.00 0.00
#> lane1_3600STDY6077912_TGTCTATC_L001_15986_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6077913_TATGTGGC_L001_15986_1     1  0.0000      0.975 1.00 0.00 0.00
#> lane1_3600STDY6077915_TCGTTAGC_L001_15986_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6077916_TACCGAGC_L001_15986_1     2  0.3686      0.850 0.00 0.86 0.14
#> lane1_3600STDY6077917_TGTTCTCC_L001_15986_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6077918_TTCGCACC_L001_15986_1     1  0.0000      0.975 1.00 0.00 0.00
#> lane1_3600STDY6077919_TTGCGTAC_L001_15986_1     3  0.2414      0.866 0.02 0.04 0.94
#> lane1_3600STDY6077920_TCTACGAC_L001_15986_1     1  0.2066      0.925 0.94 0.00 0.06
#> lane1_3600STDY6077921_TGACAGAC_L001_15986_1     3  0.2066      0.878 0.06 0.00 0.94
#> lane1_3600STDY6077922_TAGAACAC_L001_15986_1     3  0.6192      0.298 0.42 0.00 0.58
#> lane1_3600STDY6077923_TCATCCTA_L001_15986_1     2  0.0892      0.971 0.00 0.98 0.02
#> lane1_3600STDY6077924_TGCTGATA_L001_15986_1     1  0.0000      0.975 1.00 0.00 0.00
#> lane1_3600STDY6077925_TAGACGGA_L001_15986_1     1  0.2066      0.925 0.94 0.00 0.06
#> lane1_3600STDY6077926_TGTGAAGA_L001_15986_1     3  0.0892      0.865 0.00 0.02 0.98
#> lane1_3600STDY6077927_TCTCTTCA_L001_15986_1     2  0.2537      0.919 0.00 0.92 0.08
#> lane1_3600STDY6077928_TTGTTCCA_L001_15986_1     1  0.0000      0.975 1.00 0.00 0.00
#> lane1_3600STDY6077929_TGAAGCCA_L001_15986_1     1  0.0000      0.975 1.00 0.00 0.00
#> lane1_3600STDY6077930_TACCACCA_L001_15986_1     1  0.0000      0.975 1.00 0.00 0.00
#> lane1_3600STDY6077931_TGCGTGAA_L001_15986_1     1  0.0000      0.975 1.00 0.00 0.00
#> lane1_3600STDY6077932_GGTGAGTT_L001_15986_1     1  0.1529      0.946 0.96 0.00 0.04
#> lane1_3600STDY6077935_GACGGATT_L001_15986_1     1  0.2066      0.925 0.94 0.00 0.06
#> lane1_3600STDY6077936_GCAACATT_L001_15986_1     2  0.0892      0.971 0.00 0.98 0.02
#> lane1_3600STDY6077937_GGTCGTGT_L001_15986_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6077938_GAATCTGT_L001_15986_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6077939_GTACATCT_L001_15986_1     3  0.2066      0.878 0.06 0.00 0.94
#> lane1_3600STDY6077940_GAGGTGCT_L001_15986_1     1  0.0000      0.975 1.00 0.00 0.00
#> lane1_3600STDY6077941_GCATGGCT_L001_15986_1     1  0.0000      0.975 1.00 0.00 0.00
#> lane1_3600STDY6077942_GTTAGCCT_L001_15986_1     1  0.0000      0.975 1.00 0.00 0.00
#> lane1_3600STDY6077943_GTCGCTAT_L001_15986_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6077944_GGAATGAT_L001_15986_1     1  0.2066      0.924 0.94 0.00 0.06
#> lane1_3600STDY6077945_GAGCCAAT_L001_15986_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6077946_GCTCCTTG_L001_15986_1     1  0.0000      0.975 1.00 0.00 0.00
#> lane1_3600STDY6077947_GTAAGGTG_L001_15986_1     1  0.0000      0.975 1.00 0.00 0.00
#> lane1_3600STDY6077948_GAGGATGG_L001_15986_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6077949_GTTGTCGG_L001_15986_1     1  0.0000      0.975 1.00 0.00 0.00
#> lane1_3600STDY6077950_GGATTAGG_L001_15986_1     1  0.2066      0.925 0.94 0.00 0.06
#> lane1_3600STDY6077951_GATAGAGG_L001_15986_1     3  0.0000      0.871 0.00 0.00 1.00
#> lane1_3600STDY6077952_GTGTGTCG_L001_15986_1     3  0.2066      0.878 0.06 0.00 0.94
#> lane1_3600STDY6077953_GCAATCCG_L001_15986_1     1  0.0000      0.975 1.00 0.00 0.00
#> lane1_3600STDY6077954_GACCTTAG_L001_15986_1     3  0.2066      0.877 0.06 0.00 0.94
#> lane1_3600STDY6077955_GCCTGTTC_L001_15986_1     1  0.0892      0.960 0.98 0.00 0.02
#> lane1_3600STDY6077956_GCACTGTC_L001_15986_1     1  0.0000      0.975 1.00 0.00 0.00
#> lane1_3600STDY6077957_GCTAACTC_L001_15986_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6077958_GATTCATC_L001_15986_1     2  0.0892      0.971 0.00 0.98 0.02
#> lane1_3600STDY6077959_GTCTTGGC_L001_15986_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6167728_TGAACTGG_L001_17236_1     2  0.2066      0.940 0.00 0.94 0.06

show/hide code output

cbind(get_classes(res, k = 4), get_membership(res, k = 4))
#>                                             class entropy silhouette   p1   p2   p3   p4
#> lane1_3600STDY6077866_TTAGGCAT_L001_15986_1     1  0.0000     0.8890 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077867_TGACCACT_L001_15986_1     3  0.4134     0.5812 0.00 0.00 0.74 0.26
#> lane1_3600STDY6077868_ACAGTGGT_L001_15986_1     1  0.0000     0.8890 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077869_GCCAATGT_L001_15986_1     1  0.5291     0.6240 0.74 0.00 0.18 0.08
#> lane1_3600STDY6077870_CAGATCTG_L001_15986_1     2  0.3172     0.8017 0.00 0.84 0.00 0.16
#> lane1_3600STDY6077871_ACTTGATG_L001_15986_1     1  0.6049     0.5374 0.68 0.00 0.12 0.20
#> lane1_3600STDY6077872_GATCAGCG_L001_15986_1     1  0.0000     0.8890 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077873_TAGCTTGT_L001_15986_1     1  0.0000     0.8890 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077874_GGCTACAG_L001_15986_1     4  0.4713     0.5389 0.36 0.00 0.00 0.64
#> lane1_3600STDY6077875_CTTGTACT_L001_15986_1     2  0.4079     0.7621 0.00 0.80 0.02 0.18
#> lane1_3600STDY6077876_TGGTTGTT_L001_15986_1     1  0.0000     0.8890 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077877_TCTCGGTT_L001_15986_1     1  0.1211     0.8655 0.96 0.00 0.00 0.04
#> lane1_3600STDY6077878_TAAGCGTT_L001_15986_1     1  0.0000     0.8890 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077879_TCCGTCTT_L001_15986_1     2  0.0707     0.8875 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077880_TGTACCTT_L001_15986_1     3  0.1211     0.7970 0.00 0.00 0.96 0.04
#> lane1_3600STDY6077881_TTCTGTGT_L001_15986_1     1  0.1411     0.8676 0.96 0.00 0.02 0.02
#> lane1_3600STDY6077882_TCTGCTGT_L001_15986_1     1  0.2647     0.8028 0.88 0.00 0.00 0.12
#> lane1_3600STDY6077884_TCGAGCGT_L001_15986_1     2  0.0000     0.8885 0.00 1.00 0.00 0.00
#> lane1_3600STDY6077885_TGATACGT_L001_15986_1     2  0.0707     0.8875 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077886_TGCATAGT_L001_15986_1     2  0.0707     0.8875 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077887_TTGACTCT_L001_15986_1     2  0.5355     0.4911 0.00 0.62 0.02 0.36
#> lane1_3600STDY6077888_TGCGATCT_L001_15986_1     1  0.5661     0.5109 0.70 0.00 0.08 0.22
#> lane1_3600STDY6077889_TTCCTGCT_L001_15986_1     1  0.0000     0.8890 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077890_TAGTGACT_L001_15986_1     1  0.0000     0.8890 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077891_TACAGGAT_L001_15986_1     1  0.4948     0.0562 0.56 0.00 0.00 0.44
#> lane1_3600STDY6077892_TCCTCAAT_L001_15986_1     1  0.2830     0.8184 0.90 0.00 0.04 0.06
#> lane1_3600STDY6077893_TGTGGTTG_L001_15986_1     1  0.0000     0.8890 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077894_TAGTCTTG_L001_15986_1     1  0.1211     0.8653 0.96 0.00 0.04 0.00
#> lane1_3600STDY6077895_TTCCATTG_L001_15986_1     2  0.3335     0.8164 0.00 0.86 0.02 0.12
#> lane1_3600STDY6077896_TCGAAGTG_L001_15986_1     2  0.1211     0.8834 0.00 0.96 0.00 0.04
#> lane1_3600STDY6077897_TAACGCTG_L001_15986_1     2  0.7139     0.2426 0.00 0.50 0.36 0.14
#> lane1_3600STDY6077898_TTGGTATG_L001_15986_1     4  0.4211     0.5198 0.04 0.10 0.02 0.84
#> lane1_3600STDY6077900_TACTTCGG_L001_15986_1     1  0.0000     0.8890 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077901_TCTCACGG_L001_15986_1     1  0.0000     0.8890 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077902_TCAGGAGG_L001_15986_1     2  0.1211     0.8868 0.00 0.96 0.00 0.04
#> lane1_3600STDY6077903_TAAGTTCG_L001_15986_1     1  0.5915     0.1588 0.56 0.00 0.04 0.40
#> lane1_3600STDY6077905_TGTATGCG_L001_15986_1     1  0.2011     0.8430 0.92 0.00 0.00 0.08
#> lane1_3600STDY6077906_TCATTGAG_L001_15986_1     1  0.0000     0.8890 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077907_TGGCTCAG_L001_15986_1     3  0.5512     0.3404 0.30 0.00 0.66 0.04
#> lane1_3600STDY6077908_TATGCCAG_L001_15986_1     2  0.1211     0.8834 0.00 0.96 0.00 0.04
#> lane1_3600STDY6077909_TCAGATTC_L001_15986_1     2  0.4894     0.7813 0.00 0.78 0.12 0.10
#> lane1_3600STDY6077910_TACTAGTC_L001_15986_1     1  0.0707     0.8793 0.98 0.00 0.00 0.02
#> lane1_3600STDY6077912_TGTCTATC_L001_15986_1     2  0.0707     0.8875 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077913_TATGTGGC_L001_15986_1     1  0.0000     0.8890 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077915_TCGTTAGC_L001_15986_1     2  0.0707     0.8869 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077916_TACCGAGC_L001_15986_1     2  0.6049     0.6694 0.00 0.68 0.20 0.12
#> lane1_3600STDY6077917_TGTTCTCC_L001_15986_1     2  0.0707     0.8875 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077918_TTCGCACC_L001_15986_1     1  0.1211     0.8717 0.96 0.00 0.00 0.04
#> lane1_3600STDY6077919_TTGCGTAC_L001_15986_1     3  0.1913     0.7926 0.00 0.02 0.94 0.04
#> lane1_3600STDY6077920_TCTACGAC_L001_15986_1     1  0.5820     0.5603 0.68 0.00 0.08 0.24
#> lane1_3600STDY6077921_TGACAGAC_L001_15986_1     3  0.2706     0.7972 0.08 0.00 0.90 0.02
#> lane1_3600STDY6077922_TAGAACAC_L001_15986_1     1  0.6797     0.3434 0.60 0.00 0.24 0.16
#> lane1_3600STDY6077923_TCATCCTA_L001_15986_1     2  0.3198     0.8530 0.00 0.88 0.08 0.04
#> lane1_3600STDY6077924_TGCTGATA_L001_15986_1     1  0.0000     0.8890 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077925_TAGACGGA_L001_15986_1     4  0.4936     0.5858 0.28 0.00 0.02 0.70
#> lane1_3600STDY6077926_TGTGAAGA_L001_15986_1     4  0.5713     0.1173 0.00 0.04 0.34 0.62
#> lane1_3600STDY6077927_TCTCTTCA_L001_15986_1     2  0.5383     0.7443 0.00 0.74 0.16 0.10
#> lane1_3600STDY6077928_TTGTTCCA_L001_15986_1     1  0.3037     0.8082 0.88 0.00 0.02 0.10
#> lane1_3600STDY6077929_TGAAGCCA_L001_15986_1     1  0.0707     0.8793 0.98 0.00 0.00 0.02
#> lane1_3600STDY6077930_TACCACCA_L001_15986_1     1  0.0000     0.8890 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077931_TGCGTGAA_L001_15986_1     1  0.0000     0.8890 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077932_GGTGAGTT_L001_15986_1     4  0.5860     0.4268 0.38 0.00 0.04 0.58
#> lane1_3600STDY6077935_GACGGATT_L001_15986_1     4  0.3400     0.6079 0.18 0.00 0.00 0.82
#> lane1_3600STDY6077936_GCAACATT_L001_15986_1     2  0.4894     0.7819 0.00 0.78 0.12 0.10
#> lane1_3600STDY6077937_GGTCGTGT_L001_15986_1     2  0.0707     0.8875 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077938_GAATCTGT_L001_15986_1     2  0.0000     0.8885 0.00 1.00 0.00 0.00
#> lane1_3600STDY6077939_GTACATCT_L001_15986_1     3  0.2335     0.8139 0.06 0.00 0.92 0.02
#> lane1_3600STDY6077940_GAGGTGCT_L001_15986_1     1  0.0000     0.8890 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077941_GCATGGCT_L001_15986_1     1  0.0000     0.8890 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077942_GTTAGCCT_L001_15986_1     1  0.0000     0.8890 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077943_GTCGCTAT_L001_15986_1     2  0.0707     0.8875 0.00 0.98 0.00 0.02
#> lane1_3600STDY6077944_GGAATGAT_L001_15986_1     1  0.4610     0.7248 0.80 0.00 0.10 0.10
#> lane1_3600STDY6077945_GAGCCAAT_L001_15986_1     2  0.1211     0.8834 0.00 0.96 0.00 0.04
#> lane1_3600STDY6077946_GCTCCTTG_L001_15986_1     1  0.0000     0.8890 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077947_GTAAGGTG_L001_15986_1     1  0.0707     0.8786 0.98 0.00 0.00 0.02
#> lane1_3600STDY6077948_GAGGATGG_L001_15986_1     2  0.1211     0.8834 0.00 0.96 0.00 0.04
#> lane1_3600STDY6077949_GTTGTCGG_L001_15986_1     1  0.0000     0.8890 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077950_GGATTAGG_L001_15986_1     1  0.6500     0.4171 0.62 0.00 0.12 0.26
#> lane1_3600STDY6077951_GATAGAGG_L001_15986_1     3  0.0707     0.8232 0.02 0.00 0.98 0.00
#> lane1_3600STDY6077952_GTGTGTCG_L001_15986_1     3  0.3611     0.7568 0.08 0.00 0.86 0.06
#> lane1_3600STDY6077953_GCAATCCG_L001_15986_1     1  0.0000     0.8890 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077954_GACCTTAG_L001_15986_1     3  0.0707     0.8232 0.02 0.00 0.98 0.00
#> lane1_3600STDY6077955_GCCTGTTC_L001_15986_1     1  0.5902     0.5900 0.70 0.00 0.14 0.16
#> lane1_3600STDY6077956_GCACTGTC_L001_15986_1     1  0.0000     0.8890 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077957_GCTAACTC_L001_15986_1     2  0.1211     0.8888 0.00 0.96 0.00 0.04
#> lane1_3600STDY6077958_GATTCATC_L001_15986_1     2  0.3935     0.8267 0.00 0.84 0.10 0.06
#> lane1_3600STDY6077959_GTCTTGGC_L001_15986_1     2  0.0707     0.8861 0.00 0.98 0.00 0.02
#> lane1_3600STDY6167728_TGAACTGG_L001_17236_1     4  0.4472     0.4180 0.00 0.22 0.02 0.76

Heatmaps for the consensus matrix. It visualizes the probability of two samples to be in a same group.

consensus_heatmap(res, k = 2)

plot of chunk tab-node-0121-consensus-heatmap-1

consensus_heatmap(res, k = 3)

plot of chunk tab-node-0121-consensus-heatmap-2

consensus_heatmap(res, k = 4)

plot of chunk tab-node-0121-consensus-heatmap-3

Heatmaps for the membership of samples in all partitions to see how consistent they are:

membership_heatmap(res, k = 2)

plot of chunk tab-node-0121-membership-heatmap-1

membership_heatmap(res, k = 3)

plot of chunk tab-node-0121-membership-heatmap-2

membership_heatmap(res, k = 4)

plot of chunk tab-node-0121-membership-heatmap-3

As soon as the classes for columns are determined, the signatures that are significantly different between subgroups can be looked for. Following are the heatmaps for signatures.

Signature heatmaps where rows are scaled:

get_signatures(res, k = 2)

plot of chunk tab-node-0121-get-signatures-1

get_signatures(res, k = 3)

plot of chunk tab-node-0121-get-signatures-2

get_signatures(res, k = 4)

plot of chunk tab-node-0121-get-signatures-3

Signature heatmaps where rows are not scaled:

get_signatures(res, k = 2, scale_rows = FALSE)

plot of chunk tab-node-0121-get-signatures-no-scale-1

get_signatures(res, k = 3, scale_rows = FALSE)

plot of chunk tab-node-0121-get-signatures-no-scale-2

get_signatures(res, k = 4, scale_rows = FALSE)

plot of chunk tab-node-0121-get-signatures-no-scale-3

Compare the overlap of signatures from different k:

compare_signatures(res)

plot of chunk node-0121-signature_compare

get_signature() returns a data frame invisibly. To get the list of signatures, the function call should be assigned to a variable explicitly. In following code, if plot argument is set to FALSE, no heatmap is plotted while only the differential analysis is performed.

# code only for demonstration
tb = get_signature(res, k = ..., plot = FALSE)

An example of the output of tb is:

#>   which_row         fdr    mean_1    mean_2 scaled_mean_1 scaled_mean_2 km
#> 1        38 0.042760348  8.373488  9.131774    -0.5533452     0.5164555  1
#> 2        40 0.018707592  7.106213  8.469186    -0.6173731     0.5762149  1
#> 3        55 0.019134737 10.221463 11.207825    -0.6159697     0.5749050  1
#> 4        59 0.006059896  5.921854  7.869574    -0.6899429     0.6439467  1
#> 5        60 0.018055526  8.928898 10.211722    -0.6204761     0.5791110  1
#> 6        98 0.009384629 15.714769 14.887706     0.6635654    -0.6193277  2
...

The columns in tb are:

  1. which_row: row indices corresponding to the input matrix.
  2. fdr: FDR for the differential test.
  3. mean_x: The mean value in group x.
  4. scaled_mean_x: The mean value in group x after rows are scaled.
  5. km: Row groups if k-means clustering is applied to rows (which is done by automatically selecting number of clusters).

If there are too many signatures, top_signatures = ... can be set to only show the signatures with the highest FDRs:

# code only for demonstration
# e.g. to show the top 500 most significant rows
tb = get_signature(res, k = ..., top_signatures = 500)

If the signatures are defined as these which are uniquely high in current group, diff_method argument can be set to "uniquely_high_in_one_group":

# code only for demonstration
tb = get_signature(res, k = ..., diff_method = "uniquely_high_in_one_group")

UMAP plot which shows how samples are separated.

dimension_reduction(res, k = 2, method = "UMAP")

plot of chunk tab-node-0121-dimension-reduction-1

dimension_reduction(res, k = 3, method = "UMAP")

plot of chunk tab-node-0121-dimension-reduction-2

dimension_reduction(res, k = 4, method = "UMAP")

plot of chunk tab-node-0121-dimension-reduction-3

Following heatmap shows how subgroups are split when increasing k:

collect_classes(res)

plot of chunk node-0121-collect-classes

Test correlation between subgroups and known annotations. If the known annotation is numeric, one-way ANOVA test is applied, and if the known annotation is discrete, chi-squared contingency table test is applied.

test_to_known_factors(res)
#>             n_sample phenotype(p-value) k
#> ATC:skmeans       86                 NA 2
#> ATC:skmeans       85                 NA 3
#> ATC:skmeans       78                 NA 4

If matrix rows can be associated to genes, consider to use functional_enrichment(res, ...) to perform function enrichment for the signature genes. See this vignette for more detailed explanations.


Node0123

Parent node: Node012. Child nodes: Node01211-leaf , Node01212-leaf , Node01231-leaf , Node01232-leaf , Node01233-leaf , Node02221-leaf , Node02222-leaf , Node03421-leaf , Node03422-leaf , Node03423-leaf .

The object with results only for a single top-value method and a single partitioning method can be extracted as:

res = res_rh["0123"]

A summary of res and all the functions that can be applied to it:

res
#> A 'ConsensusPartition' object with k = 2, 3, 4.
#>   On a matrix with 15293 rows and 40 columns.
#>   Top rows (1529) are extracted by 'ATC' method.
#>   Subgroups are detected by 'skmeans' method.
#>   Performed in total 150 partitions by row resampling.
#>   Best k for subgroups seems to be 3.
#> 
#> Following methods can be applied to this 'ConsensusPartition' object:
#>  [1] "cola_report"             "collect_classes"         "collect_plots"          
#>  [4] "collect_stats"           "colnames"                "compare_partitions"     
#>  [7] "compare_signatures"      "consensus_heatmap"       "dimension_reduction"    
#> [10] "functional_enrichment"   "get_anno_col"            "get_anno"               
#> [13] "get_classes"             "get_consensus"           "get_matrix"             
#> [16] "get_membership"          "get_param"               "get_signatures"         
#> [19] "get_stats"               "is_best_k"               "is_stable_k"            
#> [22] "membership_heatmap"      "ncol"                    "nrow"                   
#> [25] "plot_ecdf"               "predict_classes"         "rownames"               
#> [28] "select_partition_number" "show"                    "suggest_best_k"         
#> [31] "test_to_known_factors"   "top_rows_heatmap"

collect_plots() function collects all the plots made from res for all k (number of subgroups) into one single page to provide an easy and fast comparison between different k.

collect_plots(res)

plot of chunk node-0123-collect-plots

The plots are:

All the plots in panels can be made by individual functions and they are plotted later in this section.

select_partition_number() produces several plots showing different statistics for choosing “optimized” k. There are following statistics:

The detailed explanations of these statistics can be found in the cola vignette.

Generally speaking, higher 1-PAC score, higher mean silhouette score or higher concordance corresponds to better partition. Rand index and Jaccard index measure how similar the current partition is compared to partition with k-1. If they are too similar, we won't accept k is better than k-1.

select_partition_number(res)

plot of chunk node-0123-select-partition-number

The numeric values for all these statistics can be obtained by get_stats().

get_stats(res)
#>   k 1-PAC mean_silhouette concordance area_increased  Rand Jaccard
#> 2 2 1.000           1.000       1.000         0.4506 0.550   0.550
#> 3 3 1.000           0.984       0.992         0.5131 0.735   0.532
#> 4 4 0.824           0.842       0.929         0.0844 0.938   0.810

suggest_best_k() suggests the best \(k\) based on these statistics. The rules are as follows:

suggest_best_k(res)
#> [1] 3
#> attr(,"optional")
#> [1] 2

There is also optional best \(k\) = 2 that is worth to check.

Following is the table of the partitions (You need to click the show/hide code output link to see it). The membership matrix (columns with name p*) is inferred by clue::cl_consensus() function with the SE method. Basically the value in the membership matrix represents the probability to belong to a certain group. The finall subgroup label for an item is determined with the group with highest probability it belongs to.

In get_classes() function, the entropy is calculated from the membership matrix and the silhouette score is calculated from the consensus matrix.

show/hide code output

cbind(get_classes(res, k = 2), get_membership(res, k = 2))
#>                                             class entropy silhouette p1 p2
#> lane3_3600STDY6077969_TAGCTTGT_L003_15987_1     1       0          1  1  0
#> lane3_3600STDY6077970_GGCTACAG_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6077971_CTTGTACT_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6077972_TGGTTGTT_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6077974_TAAGCGTT_L003_15987_1     1       0          1  1  0
#> lane3_3600STDY6077975_TCCGTCTT_L003_15987_1     1       0          1  1  0
#> lane3_3600STDY6077976_TGTACCTT_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6077981_TGATACGT_L003_15987_1     1       0          1  1  0
#> lane3_3600STDY6077983_TTGACTCT_L003_15987_1     1       0          1  1  0
#> lane3_3600STDY6077984_TGCGATCT_L003_15987_1     1       0          1  1  0
#> lane3_3600STDY6077986_TAGTGACT_L003_15987_1     1       0          1  1  0
#> lane3_3600STDY6077987_TACAGGAT_L003_15987_1     1       0          1  1  0
#> lane3_3600STDY6077991_TTCCATTG_L003_15987_1     1       0          1  1  0
#> lane3_3600STDY6077993_TAACGCTG_L003_15987_1     1       0          1  1  0
#> lane3_3600STDY6077994_TTGGTATG_L003_15987_1     1       0          1  1  0
#> lane3_3600STDY6077995_TGAACTGG_L003_15987_1     1       0          1  1  0
#> lane3_3600STDY6077998_TCAGGAGG_L003_15987_1     1       0          1  1  0
#> lane3_3600STDY6077999_TAAGTTCG_L003_15987_1     1       0          1  1  0
#> lane3_3600STDY6078005_TCAGATTC_L003_15987_1     1       0          1  1  0
#> lane3_3600STDY6078006_TACTAGTC_L003_15987_1     1       0          1  1  0
#> lane3_3600STDY6078018_TAGAACAC_L003_15987_1     1       0          1  1  0
#> lane3_3600STDY6078019_TCATCCTA_L003_15987_1     1       0          1  1  0
#> lane3_3600STDY6078022_TGTGAAGA_L003_15987_1     1       0          1  1  0
#> lane3_3600STDY6078023_TCTCTTCA_L003_15987_1     1       0          1  1  0
#> lane3_3600STDY6078026_TACCACCA_L003_15987_1     1       0          1  1  0
#> lane3_3600STDY6078030_GTGTCCTT_L003_15987_1     1       0          1  1  0
#> lane3_3600STDY6078031_GACGGATT_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078035_GTACATCT_L003_15987_1     1       0          1  1  0
#> lane3_3600STDY6078036_GAGGTGCT_L003_15987_1     1       0          1  1  0
#> lane3_3600STDY6078038_GTTAGCCT_L003_15987_1     1       0          1  1  0
#> lane3_3600STDY6078039_GTCGCTAT_L003_15987_1     1       0          1  1  0
#> lane3_3600STDY6078042_GCTCCTTG_L003_15987_1     1       0          1  1  0
#> lane3_3600STDY6078043_GTAAGGTG_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078044_GAGGATGG_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078045_GTTGTCGG_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078046_GGATTAGG_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078047_GATAGAGG_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078053_GCTAACTC_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078054_GATTCATC_L003_15987_1     2       0          1  0  1
#> lane3_3600STDY6078055_GTCTTGGC_L003_15987_1     2       0          1  0  1

show/hide code output

cbind(get_classes(res, k = 3), get_membership(res, k = 3))
#>                                             class entropy silhouette   p1 p2   p3
#> lane3_3600STDY6077969_TAGCTTGT_L003_15987_1     3     0.0      0.975 0.00  0 1.00
#> lane3_3600STDY6077970_GGCTACAG_L003_15987_1     2     0.0      1.000 0.00  1 0.00
#> lane3_3600STDY6077971_CTTGTACT_L003_15987_1     2     0.0      1.000 0.00  1 0.00
#> lane3_3600STDY6077972_TGGTTGTT_L003_15987_1     3     0.0      0.975 0.00  0 1.00
#> lane3_3600STDY6077974_TAAGCGTT_L003_15987_1     1     0.0      1.000 1.00  0 0.00
#> lane3_3600STDY6077975_TCCGTCTT_L003_15987_1     1     0.0      1.000 1.00  0 0.00
#> lane3_3600STDY6077976_TGTACCTT_L003_15987_1     2     0.0      1.000 0.00  1 0.00
#> lane3_3600STDY6077981_TGATACGT_L003_15987_1     3     0.0      0.975 0.00  0 1.00
#> lane3_3600STDY6077983_TTGACTCT_L003_15987_1     3     0.0      0.975 0.00  0 1.00
#> lane3_3600STDY6077984_TGCGATCT_L003_15987_1     3     0.0      0.975 0.00  0 1.00
#> lane3_3600STDY6077986_TAGTGACT_L003_15987_1     3     0.0      0.975 0.00  0 1.00
#> lane3_3600STDY6077987_TACAGGAT_L003_15987_1     1     0.0      1.000 1.00  0 0.00
#> lane3_3600STDY6077991_TTCCATTG_L003_15987_1     3     0.4      0.823 0.16  0 0.84
#> lane3_3600STDY6077993_TAACGCTG_L003_15987_1     1     0.0      1.000 1.00  0 0.00
#> lane3_3600STDY6077994_TTGGTATG_L003_15987_1     1     0.0      1.000 1.00  0 0.00
#> lane3_3600STDY6077995_TGAACTGG_L003_15987_1     1     0.0      1.000 1.00  0 0.00
#> lane3_3600STDY6077998_TCAGGAGG_L003_15987_1     1     0.0      1.000 1.00  0 0.00
#> lane3_3600STDY6077999_TAAGTTCG_L003_15987_1     1     0.0      1.000 1.00  0 0.00
#> lane3_3600STDY6078005_TCAGATTC_L003_15987_1     1     0.0      1.000 1.00  0 0.00
#> lane3_3600STDY6078006_TACTAGTC_L003_15987_1     1     0.0      1.000 1.00  0 0.00
#> lane3_3600STDY6078018_TAGAACAC_L003_15987_1     3     0.0      0.975 0.00  0 1.00
#> lane3_3600STDY6078019_TCATCCTA_L003_15987_1     3     0.4      0.823 0.16  0 0.84
#> lane3_3600STDY6078022_TGTGAAGA_L003_15987_1     1     0.0      1.000 1.00  0 0.00
#> lane3_3600STDY6078023_TCTCTTCA_L003_15987_1     3     0.0      0.975 0.00  0 1.00
#> lane3_3600STDY6078026_TACCACCA_L003_15987_1     3     0.0      0.975 0.00  0 1.00
#> lane3_3600STDY6078030_GTGTCCTT_L003_15987_1     1     0.0      1.000 1.00  0 0.00
#> lane3_3600STDY6078031_GACGGATT_L003_15987_1     2     0.0      1.000 0.00  1 0.00
#> lane3_3600STDY6078035_GTACATCT_L003_15987_1     3     0.0      0.975 0.00  0 1.00
#> lane3_3600STDY6078036_GAGGTGCT_L003_15987_1     1     0.0      1.000 1.00  0 0.00
#> lane3_3600STDY6078038_GTTAGCCT_L003_15987_1     3     0.0      0.975 0.00  0 1.00
#> lane3_3600STDY6078039_GTCGCTAT_L003_15987_1     3     0.0      0.975 0.00  0 1.00
#> lane3_3600STDY6078042_GCTCCTTG_L003_15987_1     1     0.0      1.000 1.00  0 0.00
#> lane3_3600STDY6078043_GTAAGGTG_L003_15987_1     2     0.0      1.000 0.00  1 0.00
#> lane3_3600STDY6078044_GAGGATGG_L003_15987_1     2     0.0      1.000 0.00  1 0.00
#> lane3_3600STDY6078045_GTTGTCGG_L003_15987_1     2     0.0      1.000 0.00  1 0.00
#> lane3_3600STDY6078046_GGATTAGG_L003_15987_1     2     0.0      1.000 0.00  1 0.00
#> lane3_3600STDY6078047_GATAGAGG_L003_15987_1     2     0.0      1.000 0.00  1 0.00
#> lane3_3600STDY6078053_GCTAACTC_L003_15987_1     2     0.0      1.000 0.00  1 0.00
#> lane3_3600STDY6078054_GATTCATC_L003_15987_1     2     0.0      1.000 0.00  1 0.00
#> lane3_3600STDY6078055_GTCTTGGC_L003_15987_1     2     0.0      1.000 0.00  1 0.00

show/hide code output

cbind(get_classes(res, k = 4), get_membership(res, k = 4))
#>                                             class entropy silhouette   p1   p2   p3   p4
#> lane3_3600STDY6077969_TAGCTTGT_L003_15987_1     3  0.0707     0.9105 0.00 0.00 0.98 0.02
#> lane3_3600STDY6077970_GGCTACAG_L003_15987_1     2  0.0000     0.8747 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077971_CTTGTACT_L003_15987_1     2  0.0000     0.8747 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077972_TGGTTGTT_L003_15987_1     4  0.2345     0.7852 0.00 0.00 0.10 0.90
#> lane3_3600STDY6077974_TAAGCGTT_L003_15987_1     1  0.0000     0.9749 1.00 0.00 0.00 0.00
#> lane3_3600STDY6077975_TCCGTCTT_L003_15987_1     1  0.0000     0.9749 1.00 0.00 0.00 0.00
#> lane3_3600STDY6077976_TGTACCTT_L003_15987_1     2  0.0000     0.8747 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077981_TGATACGT_L003_15987_1     3  0.0707     0.9105 0.00 0.00 0.98 0.02
#> lane3_3600STDY6077983_TTGACTCT_L003_15987_1     4  0.3610     0.6939 0.00 0.00 0.20 0.80
#> lane3_3600STDY6077984_TGCGATCT_L003_15987_1     3  0.2011     0.8720 0.00 0.00 0.92 0.08
#> lane3_3600STDY6077986_TAGTGACT_L003_15987_1     3  0.0707     0.9105 0.00 0.00 0.98 0.02
#> lane3_3600STDY6077987_TACAGGAT_L003_15987_1     1  0.0000     0.9749 1.00 0.00 0.00 0.00
#> lane3_3600STDY6077991_TTCCATTG_L003_15987_1     3  0.3935     0.7955 0.10 0.00 0.84 0.06
#> lane3_3600STDY6077993_TAACGCTG_L003_15987_1     1  0.0000     0.9749 1.00 0.00 0.00 0.00
#> lane3_3600STDY6077994_TTGGTATG_L003_15987_1     1  0.4731     0.7601 0.78 0.00 0.06 0.16
#> lane3_3600STDY6077995_TGAACTGG_L003_15987_1     1  0.0000     0.9749 1.00 0.00 0.00 0.00
#> lane3_3600STDY6077998_TCAGGAGG_L003_15987_1     1  0.0000     0.9749 1.00 0.00 0.00 0.00
#> lane3_3600STDY6077999_TAAGTTCG_L003_15987_1     1  0.0000     0.9749 1.00 0.00 0.00 0.00
#> lane3_3600STDY6078005_TCAGATTC_L003_15987_1     1  0.0000     0.9749 1.00 0.00 0.00 0.00
#> lane3_3600STDY6078006_TACTAGTC_L003_15987_1     1  0.2830     0.8920 0.90 0.00 0.04 0.06
#> lane3_3600STDY6078018_TAGAACAC_L003_15987_1     3  0.0707     0.9105 0.00 0.00 0.98 0.02
#> lane3_3600STDY6078019_TCATCCTA_L003_15987_1     3  0.6976     0.4261 0.24 0.00 0.58 0.18
#> lane3_3600STDY6078022_TGTGAAGA_L003_15987_1     1  0.0000     0.9749 1.00 0.00 0.00 0.00
#> lane3_3600STDY6078023_TCTCTTCA_L003_15987_1     3  0.0707     0.9045 0.00 0.00 0.98 0.02
#> lane3_3600STDY6078026_TACCACCA_L003_15987_1     3  0.0000     0.9087 0.00 0.00 1.00 0.00
#> lane3_3600STDY6078030_GTGTCCTT_L003_15987_1     1  0.0000     0.9749 1.00 0.00 0.00 0.00
#> lane3_3600STDY6078031_GACGGATT_L003_15987_1     4  0.3400     0.7466 0.00 0.18 0.00 0.82
#> lane3_3600STDY6078035_GTACATCT_L003_15987_1     3  0.1637     0.8871 0.00 0.00 0.94 0.06
#> lane3_3600STDY6078036_GAGGTGCT_L003_15987_1     1  0.0707     0.9604 0.98 0.00 0.00 0.02
#> lane3_3600STDY6078038_GTTAGCCT_L003_15987_1     3  0.1211     0.9018 0.00 0.00 0.96 0.04
#> lane3_3600STDY6078039_GTCGCTAT_L003_15987_1     3  0.1637     0.8871 0.00 0.00 0.94 0.06
#> lane3_3600STDY6078042_GCTCCTTG_L003_15987_1     1  0.0000     0.9749 1.00 0.00 0.00 0.00
#> lane3_3600STDY6078043_GTAAGGTG_L003_15987_1     2  0.0000     0.8747 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078044_GAGGATGG_L003_15987_1     2  0.0000     0.8747 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078045_GTTGTCGG_L003_15987_1     2  0.0000     0.8747 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078046_GGATTAGG_L003_15987_1     2  0.0000     0.8747 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078047_GATAGAGG_L003_15987_1     2  0.4994     0.0273 0.00 0.52 0.00 0.48
#> lane3_3600STDY6078053_GCTAACTC_L003_15987_1     4  0.3172     0.7659 0.00 0.16 0.00 0.84
#> lane3_3600STDY6078054_GATTCATC_L003_15987_1     2  0.0000     0.8747 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078055_GTCTTGGC_L003_15987_1     2  0.4977     0.0964 0.00 0.54 0.00 0.46

Heatmaps for the consensus matrix. It visualizes the probability of two samples to be in a same group.

consensus_heatmap(res, k = 2)

plot of chunk tab-node-0123-consensus-heatmap-1

consensus_heatmap(res, k = 3)

plot of chunk tab-node-0123-consensus-heatmap-2

consensus_heatmap(res, k = 4)

plot of chunk tab-node-0123-consensus-heatmap-3

Heatmaps for the membership of samples in all partitions to see how consistent they are:

membership_heatmap(res, k = 2)

plot of chunk tab-node-0123-membership-heatmap-1

membership_heatmap(res, k = 3)

plot of chunk tab-node-0123-membership-heatmap-2

membership_heatmap(res, k = 4)

plot of chunk tab-node-0123-membership-heatmap-3

As soon as the classes for columns are determined, the signatures that are significantly different between subgroups can be looked for. Following are the heatmaps for signatures.

Signature heatmaps where rows are scaled:

get_signatures(res, k = 2)

plot of chunk tab-node-0123-get-signatures-1

get_signatures(res, k = 3)

plot of chunk tab-node-0123-get-signatures-2

get_signatures(res, k = 4)

plot of chunk tab-node-0123-get-signatures-3

Signature heatmaps where rows are not scaled:

get_signatures(res, k = 2, scale_rows = FALSE)

plot of chunk tab-node-0123-get-signatures-no-scale-1

get_signatures(res, k = 3, scale_rows = FALSE)

plot of chunk tab-node-0123-get-signatures-no-scale-2

get_signatures(res, k = 4, scale_rows = FALSE)

plot of chunk tab-node-0123-get-signatures-no-scale-3

Compare the overlap of signatures from different k:

compare_signatures(res)

plot of chunk node-0123-signature_compare

get_signature() returns a data frame invisibly. To get the list of signatures, the function call should be assigned to a variable explicitly. In following code, if plot argument is set to FALSE, no heatmap is plotted while only the differential analysis is performed.

# code only for demonstration
tb = get_signature(res, k = ..., plot = FALSE)

An example of the output of tb is:

#>   which_row         fdr    mean_1    mean_2 scaled_mean_1 scaled_mean_2 km
#> 1        38 0.042760348  8.373488  9.131774    -0.5533452     0.5164555  1
#> 2        40 0.018707592  7.106213  8.469186    -0.6173731     0.5762149  1
#> 3        55 0.019134737 10.221463 11.207825    -0.6159697     0.5749050  1
#> 4        59 0.006059896  5.921854  7.869574    -0.6899429     0.6439467  1
#> 5        60 0.018055526  8.928898 10.211722    -0.6204761     0.5791110  1
#> 6        98 0.009384629 15.714769 14.887706     0.6635654    -0.6193277  2
...

The columns in tb are:

  1. which_row: row indices corresponding to the input matrix.
  2. fdr: FDR for the differential test.
  3. mean_x: The mean value in group x.
  4. scaled_mean_x: The mean value in group x after rows are scaled.
  5. km: Row groups if k-means clustering is applied to rows (which is done by automatically selecting number of clusters).

If there are too many signatures, top_signatures = ... can be set to only show the signatures with the highest FDRs:

# code only for demonstration
# e.g. to show the top 500 most significant rows
tb = get_signature(res, k = ..., top_signatures = 500)

If the signatures are defined as these which are uniquely high in current group, diff_method argument can be set to "uniquely_high_in_one_group":

# code only for demonstration
tb = get_signature(res, k = ..., diff_method = "uniquely_high_in_one_group")

UMAP plot which shows how samples are separated.

dimension_reduction(res, k = 2, method = "UMAP")

plot of chunk tab-node-0123-dimension-reduction-1

dimension_reduction(res, k = 3, method = "UMAP")

plot of chunk tab-node-0123-dimension-reduction-2

dimension_reduction(res, k = 4, method = "UMAP")

plot of chunk tab-node-0123-dimension-reduction-3

Following heatmap shows how subgroups are split when increasing k:

collect_classes(res)

plot of chunk node-0123-collect-classes

Test correlation between subgroups and known annotations. If the known annotation is numeric, one-way ANOVA test is applied, and if the known annotation is discrete, chi-squared contingency table test is applied.

test_to_known_factors(res)
#>             n_sample phenotype(p-value) k
#> ATC:skmeans       40                 NA 2
#> ATC:skmeans       40                 NA 3
#> ATC:skmeans       37                 NA 4

If matrix rows can be associated to genes, consider to use functional_enrichment(res, ...) to perform function enrichment for the signature genes. See this vignette for more detailed explanations.


Node02

Parent node: Node0. Child nodes: Node011 , Node012 , Node013-leaf , Node014-leaf , Node021 , Node022 , Node023 , Node031 , Node032-leaf , Node033-leaf , Node034 .

The object with results only for a single top-value method and a single partitioning method can be extracted as:

res = res_rh["02"]

A summary of res and all the functions that can be applied to it:

res
#> A 'ConsensusPartition' object with k = 2, 3, 4.
#>   On a matrix with 16390 rows and 403 columns.
#>   Top rows (1639) are extracted by 'ATC' method.
#>   Subgroups are detected by 'skmeans' method.
#>   Performed in total 150 partitions by row resampling.
#>   Best k for subgroups seems to be 3.
#> 
#> Following methods can be applied to this 'ConsensusPartition' object:
#>  [1] "cola_report"             "collect_classes"         "collect_plots"          
#>  [4] "collect_stats"           "colnames"                "compare_partitions"     
#>  [7] "compare_signatures"      "consensus_heatmap"       "dimension_reduction"    
#> [10] "functional_enrichment"   "get_anno_col"            "get_anno"               
#> [13] "get_classes"             "get_consensus"           "get_matrix"             
#> [16] "get_membership"          "get_param"               "get_signatures"         
#> [19] "get_stats"               "is_best_k"               "is_stable_k"            
#> [22] "membership_heatmap"      "ncol"                    "nrow"                   
#> [25] "plot_ecdf"               "predict_classes"         "rownames"               
#> [28] "select_partition_number" "show"                    "suggest_best_k"         
#> [31] "test_to_known_factors"   "top_rows_heatmap"

collect_plots() function collects all the plots made from res for all k (number of subgroups) into one single page to provide an easy and fast comparison between different k.

collect_plots(res)

plot of chunk node-02-collect-plots

The plots are:

All the plots in panels can be made by individual functions and they are plotted later in this section.

select_partition_number() produces several plots showing different statistics for choosing “optimized” k. There are following statistics:

The detailed explanations of these statistics can be found in the cola vignette.

Generally speaking, higher 1-PAC score, higher mean silhouette score or higher concordance corresponds to better partition. Rand index and Jaccard index measure how similar the current partition is compared to partition with k-1. If they are too similar, we won't accept k is better than k-1.

select_partition_number(res)

plot of chunk node-02-select-partition-number

The numeric values for all these statistics can be obtained by get_stats().

get_stats(res)
#>   k 1-PAC mean_silhouette concordance area_increased  Rand Jaccard
#> 2 2 1.000           0.997       0.999          0.435 0.565   0.565
#> 3 3 0.999           0.978       0.987          0.529 0.764   0.585
#> 4 4 0.767           0.691       0.863          0.031 0.810   0.545

suggest_best_k() suggests the best \(k\) based on these statistics. The rules are as follows:

suggest_best_k(res)
#> [1] 3
#> attr(,"optional")
#> [1] 2

There is also optional best \(k\) = 2 that is worth to check.

Following is the table of the partitions (You need to click the show/hide code output link to see it). The membership matrix (columns with name p*) is inferred by clue::cl_consensus() function with the SE method. Basically the value in the membership matrix represents the probability to belong to a certain group. The finall subgroup label for an item is determined with the group with highest probability it belongs to.

In get_classes() function, the entropy is calculated from the membership matrix and the silhouette score is calculated from the consensus matrix.

show/hide code output

cbind(get_classes(res, k = 2), get_membership(res, k = 2))
#>                                             class entropy silhouette   p1   p2
#> lane1_3600STDY6077864_ATCACGTT_L001_15986_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6077865_CGATGTTT_L001_15986_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6077883_TTGGAGGT_L001_15986_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6077899_TGAACTGG_L001_15986_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6077904_TCCAGTCG_L001_15986_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6077911_TTCAGCTC_L001_15986_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6077914_TTACTCGC_L001_15986_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6077933_GATCTCTT_L001_15986_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6077934_GTGTCCTT_L001_15986_1     2   0.000      0.998 0.00 1.00
#> lane3_3600STDY6077960_ATCACGTT_L003_15987_1     2   0.000      0.998 0.00 1.00
#> lane3_3600STDY6077961_CGATGTTT_L003_15987_1     2   0.000      0.998 0.00 1.00
#> lane3_3600STDY6077978_TCTGCTGT_L003_15987_1     2   0.000      0.998 0.00 1.00
#> lane3_3600STDY6077997_TCTCACGG_L003_15987_1     2   0.000      0.998 0.00 1.00
#> lane3_3600STDY6078001_TGTATGCG_L003_15987_1     2   0.000      0.998 0.00 1.00
#> lane3_3600STDY6078027_TGCGTGAA_L003_15987_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6167697_ACAGTGGT_L001_17236_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6167700_ACTTGATG_L001_17236_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6167706_TCTCGGTT_L001_17236_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6167707_TAAGCGTT_L001_17236_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6167710_TTCTGTGT_L001_17236_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6167718_TTCCTGCT_L001_17236_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6167724_TTCCATTG_L001_17236_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6167734_TGTATGCG_L001_17236_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6167758_TGAAGCCA_L001_17236_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6167776_GTAAGGTG_L001_17236_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6167778_GTTGTCGG_L001_17236_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6167788_GTCTTGGC_L001_17236_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6167810_CGCTTCCT_L001_17236_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6167813_CCTAGTAT_L001_17236_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6167844_ACCTCTGG_L001_17236_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6167847_AGGTCACG_L001_17236_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6167857_AATCCTGA_L001_17236_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6167858_AGGATTCA_L001_17236_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6167861_CGGAAACA_L001_17236_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6167870_GCTGTGAA_L001_17236_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6167871_ACCTTCAA_L001_17236_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6167872_ACAAAGCC_L001_17236_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6167873_CAAAACCG_L001_17236_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6167879_ACCCAACA_L001_17236_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6167883_TATTGGAG_L001_17236_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6167884_TAAACATA_L001_17236_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6167897_GTCAAGCT_L001_17236_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6167908_TAGTCGGT_L001_17236_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6167918_GCGCTGAT_L001_17236_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6167920_GAGGGCAG_L001_17236_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6167950_TAGCGAGA_L001_17236_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6167965_GGTAAGAG_L001_17236_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6167989_AGGATCTC_L001_17236_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6168016_CCTACCCG_L001_17236_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6168018_TATACATC_L001_17236_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6168023_GCTGGTTG_L001_17236_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6168040_AAACCCGT_L001_17236_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6168063_GTACGGAC_L001_17236_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6168064_CATTTTGC_L001_17236_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6168069_CTGCCTAG_L001_17236_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6168075_TGGTTGAC_L001_17236_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6168076_ACCTGCTG_L001_17236_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184188_ACTTGATG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184192_CTTGTACT_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184199_TCTGCTGT_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184200_TTGGAGGT_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184208_TACAGGAT_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184211_TAGTCTTG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184212_TTCCATTG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184213_TCGAAGTG_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184215_TTGGTATG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184216_TGAACTGG_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184217_TACTTCGG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184219_TCAGGAGG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184222_TGTATGCG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184223_TCATTGAG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184224_TGGCTCAG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184227_TACTAGTC_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184230_TATGTGGC_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184231_TTACTCGC_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184234_TGTTCTCC_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184238_TGACAGAC_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184239_TAGAACAC_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184240_TCATCCTA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184244_TCTCTTCA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184246_TGAAGCCA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184247_TACCACCA_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184248_TGCGTGAA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184254_GGTCGTGT_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184256_GTACATCT_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184257_GAGGTGCT_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184258_GCATGGCT_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184259_GTTAGCCT_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184260_GTCGCTAT_L004_17480_1     2   0.141      0.978 0.02 0.98
#> lane4_3600STDY6184261_GGAATGAT_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184262_GAGCCAAT_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184263_GCTCCTTG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184264_GTAAGGTG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184265_GAGGATGG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184267_GGATTAGG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184268_GATAGAGG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184270_GCAATCCG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184271_GACCTTAG_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184272_GCCTGTTC_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184273_GCACTGTC_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184275_GATTCATC_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184280_GCGATTAC_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184282_GGCACAAC_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184283_GACACTTA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184285_GGAGTCTA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184286_GCTATGGA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184287_GAGTGCGA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184288_GTAACCGA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184290_GCCTTACA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184294_CGTTCGGT_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184295_CACCAGGT_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184297_CCGTATCT_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184299_CAAGACCT_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184306_CCACTTGG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184307_CTGTACGG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184309_CACTCGAG_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184311_CTTGCTTC_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184312_CATAGGTC_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184313_CACATTGC_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184314_CGCTAAGC_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184317_CTCAAGAC_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184318_CGTGTCAC_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184319_CCATGCAC_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184321_CAAGTAGA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184322_CTCTCTCA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184323_CGACTGCA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184324_CCTGAGCA_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184326_CGGAGGAA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184328_AGGCAGCT_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184331_AGACCGTG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184332_ACCTCTGG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184336_ACTGTTAG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184337_AAGAGTAG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184338_ATTCGGAG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184339_ACGCAATC_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184340_ACAAGTGC_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184341_ATGGATCC_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184342_AGAGGACC_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184343_ATCTCCAC_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184344_ATTGGCTA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184346_AGGATTCA_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184347_AACTGGCA_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184348_ACAACGCA_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184352_TCTCAGTG_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184354_CCTAAGAT_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184355_CTCAGATA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184356_CCCATAGG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184357_GCTATGAC_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184358_GCTGTGAA_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184359_ACCTTCAA_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184360_ACAAAGCC_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184361_CAAAACCG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184363_AAGTCGTA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184364_CATCCGTA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184365_TTGTGTCT_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184366_TGCTCTAG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184367_ACCCAACA_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184368_CGATCTGA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184369_GTTCCACG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184370_ACTCTTTC_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184371_TATTGGAG_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184372_TAAACATA_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184373_GTAAGATA_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184388_ACGGCAGC_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184389_AGAACTGA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184390_CGCCTTTG_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184391_TAAGGTCA_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184392_ACGTTGGC_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184401_AGGACGAT_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184403_AGGTCTAA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184408_GAGGGCAG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184412_GCATCCGG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184413_GTCACCAG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184414_GAGGTCGC_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184415_AAGGGGTA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184416_TTTTACGT_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184418_AGTGTAGT_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184419_GTGGCCAA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184426_CTCGTCGA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184433_CGCCAGTA_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184435_TGACCCAC_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184437_CTTTTGAT_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184438_TAGCGAGA_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184439_TTCGCAGG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184440_TAGTTATT_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184442_GCGGGTCT_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184445_GTCTGAGG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184446_TCTGGCGA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184447_AATTTGCG_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184448_TGGGTTGG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184449_AGTTGAAA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184450_GACCGGAA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184455_ATACAGGC_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184456_TGAGACTC_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184457_ACTCAGGA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184459_CTTGAATC_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184460_CCGCATGA_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184461_AAGTAACA_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184462_GTGGTACT_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184463_AGCTGTGC_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184464_TTACCTTC_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184465_TCCGGGTA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184466_CTACGTAA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184467_TCGGACCG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184471_AAGTGATA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184473_TATTCTGG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184474_AGCCGTGA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184475_AAGCCTTC_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184480_TTGGAGCA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184483_AATCGGGT_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184484_AGGTAGAC_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184486_CAGGCTCT_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184487_AAAGCACG_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184488_GTATACAC_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184489_GGACATAT_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184490_CGGTTGGG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184491_GTCCGTGA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184498_CGCCTGAT_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184500_TAAGGGTG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184501_GGTGTCGA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184502_CCGTTAGG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184503_TGGCAAAA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184504_CCTACCCG_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184505_AACAGCGC_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184507_AAGCGACT_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184508_GAAGCGCA_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184509_ACCTCTAC_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184510_GATTGCGT_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184511_GCTGGTTG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184512_ATCGTCCT_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184514_CGCACCTA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184515_CTTCGGCT_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184522_AAACATCA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184523_CCATAGCT_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184524_GTTATGGC_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184532_TGGGGCTT_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184533_CTGACTAC_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184534_AACTTTTA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184535_AGGGATTC_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184536_CCGAGTAG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184538_GGAGTTGA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184539_AGCTCATC_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184541_ACTGGTCG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184542_GACGATTG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184543_AGCGATGA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184544_GAAGAGAT_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184545_CGTATGCA_L004_17480_1     2   0.795      0.684 0.24 0.76
#> lane4_3600STDY6184546_CACGTGCG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184548_GTTCCGCA_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184551_GTACGGAC_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184552_CATTTTGC_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184553_TCCTCTCT_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184555_ACAGAAGA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184557_CTGCCTAG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184558_GAGCGCAT_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184560_CCGATGTA_L004_17480_1     1   0.242      0.958 0.96 0.04
#> lane4_3600STDY6184562_CAAGGAGC_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184563_TGGTTGAC_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184564_ACCTGCTG_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183797_ATCACGTT_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183808_CTTGTACT_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183810_TCTCGGTT_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183816_TTGGAGGT_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183820_TTGACTCT_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183839_TCATTGAG_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183841_TATGCCAG_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183857_TGCTGATA_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183864_TGCGTGAA_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183865_GGTGAGTT_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183874_GCATGGCT_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183881_GAGGATGG_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183882_GTTGTCGG_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183884_GATAGAGG_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183885_GTGTGTCG_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183886_GCAATCCG_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183887_GACCTTAG_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183888_GCCTGTTC_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183889_GCACTGTC_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183891_GATTCATC_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183898_GGCACAAC_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183905_GGCAAGCA_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183908_GCAGGTAA_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183909_GCGTCGAA_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183910_CGTTCGGT_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183911_CACCAGGT_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183912_CTGCGAGT_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183913_CCGTATCT_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183914_CGCTTCCT_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183927_CTTGCTTC_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183928_CATAGGTC_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183929_CACATTGC_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183932_CAGCTGAC_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183933_CTCAAGAC_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183934_CGTGTCAC_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183944_AGGCAGCT_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183952_ACTGTTAG_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183953_AAGAGTAG_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183956_ACAAGTGC_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183957_ATGGATCC_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183958_AGAGGACC_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183959_ATCTCCAC_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183960_ATTGGCTA_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183964_ACAACGCA_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183965_CGGAAACA_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183970_CCTAAGAT_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183975_ACCTTCAA_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183976_ACAAAGCC_L001_17592_1     1   0.760      0.717 0.78 0.22
#> lane1_3600STDY6183977_CAAAACCG_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183978_GCTGGACA_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183979_AAGTCGTA_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183980_CATCCGTA_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183981_TTGTGTCT_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183982_TGCTCTAG_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183983_ACCCAACA_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183984_CGATCTGA_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183985_GTTCCACG_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183986_ACTCTTTC_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183987_TATTGGAG_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183988_TAAACATA_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183989_GTAAGATA_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183992_TGTCATCT_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183993_ATAGCTCT_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183994_AGTCCAAC_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183996_TCTGACGC_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183997_TGTCGACT_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183998_GTCACGTA_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183999_TTGAGCGA_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184001_GTCAAGCT_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6184011_ACTTCGTA_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6184014_ACGTACTA_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184016_GCCTGCCC_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184018_CTTGACCG_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184019_AGGTCTAA_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184020_CGAGATCC_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184022_GCGCTGAT_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184023_TGCTGAAC_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6184034_AGTGTAGT_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184039_ACTTGGGG_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184040_GGCTGCTT_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184042_CTCGTCGA_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184043_TCTACAGT_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184044_CTTCTAGA_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184046_ATAAGACT_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184047_GTTTTTCG_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184051_TGACCCAC_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184058_GCGGGTCT_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184061_GTCTGAGG_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184062_TCTGGCGA_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184063_AATTTGCG_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184064_TGGGTTGG_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184065_AGTTGAAA_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184066_GACCGGAA_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184067_GATCGAAC_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6184068_GTATAGGG_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6184070_AGTCCGAT_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184071_ATACAGGC_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184078_GTGGTACT_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184079_AGCTGTGC_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6184081_TCCGGGTA_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184082_CTACGTAA_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184085_TTCTTAGC_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184086_TGAGTAAG_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184087_AAGTGATA_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184088_TCGATGCG_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184089_TATTCTGG_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184090_AGCCGTGA_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184091_AAGCCTTC_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184092_AGGTATCC_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184094_CTGTTTGA_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184095_GGAATTTC_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184102_CAGGCTCT_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184103_AAAGCACG_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184104_GTATACAC_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184105_GGACATAT_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6184106_CGGTTGGG_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184111_ATAACTAG_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184112_AATAGAGA_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184113_TCACCATT_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184114_CGCCTGAT_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184115_GCGTGAAC_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184116_TAAGGGTG_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184119_TGGCAAAA_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184126_GATTGCGT_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184130_CGCACCTA_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184132_CGAATCGA_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6184134_AGCTCTTT_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184135_TAATCCCT_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184136_AGGACACT_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184138_AAACATCA_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184140_GTTATGGC_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184141_ATCCCCTA_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184143_CAATTGTT_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184144_AAACCCGT_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184151_AGGGATTC_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184154_GGAGTTGA_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184156_TAATCAAC_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6184158_GACGATTG_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184160_GAAGAGAT_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184163_GCTTAAAC_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184164_GTTCCGCA_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184167_GTACGGAC_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184170_AGCAACGA_L001_17592_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6184180_ACCTGCTG_L001_17592_1     2   0.000      0.998 0.00 1.00

show/hide code output

cbind(get_classes(res, k = 3), get_membership(res, k = 3))
#>                                             class entropy silhouette   p1   p2   p3
#> lane1_3600STDY6077864_ATCACGTT_L001_15986_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6077865_CGATGTTT_L001_15986_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6077883_TTGGAGGT_L001_15986_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6077899_TGAACTGG_L001_15986_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6077904_TCCAGTCG_L001_15986_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6077911_TTCAGCTC_L001_15986_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6077914_TTACTCGC_L001_15986_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6077933_GATCTCTT_L001_15986_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6077934_GTGTCCTT_L001_15986_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane3_3600STDY6077960_ATCACGTT_L003_15987_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane3_3600STDY6077961_CGATGTTT_L003_15987_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane3_3600STDY6077978_TCTGCTGT_L003_15987_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane3_3600STDY6077997_TCTCACGG_L003_15987_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane3_3600STDY6078001_TGTATGCG_L003_15987_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane3_3600STDY6078027_TGCGTGAA_L003_15987_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6167697_ACAGTGGT_L001_17236_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6167700_ACTTGATG_L001_17236_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6167706_TCTCGGTT_L001_17236_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6167707_TAAGCGTT_L001_17236_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6167710_TTCTGTGT_L001_17236_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6167718_TTCCTGCT_L001_17236_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6167724_TTCCATTG_L001_17236_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6167734_TGTATGCG_L001_17236_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6167758_TGAAGCCA_L001_17236_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6167776_GTAAGGTG_L001_17236_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6167778_GTTGTCGG_L001_17236_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6167788_GTCTTGGC_L001_17236_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6167810_CGCTTCCT_L001_17236_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6167813_CCTAGTAT_L001_17236_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6167844_ACCTCTGG_L001_17236_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6167847_AGGTCACG_L001_17236_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6167857_AATCCTGA_L001_17236_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6167858_AGGATTCA_L001_17236_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6167861_CGGAAACA_L001_17236_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6167870_GCTGTGAA_L001_17236_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6167871_ACCTTCAA_L001_17236_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6167872_ACAAAGCC_L001_17236_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6167873_CAAAACCG_L001_17236_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6167879_ACCCAACA_L001_17236_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6167883_TATTGGAG_L001_17236_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6167884_TAAACATA_L001_17236_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6167897_GTCAAGCT_L001_17236_1     3  0.2066      0.932 0.06 0.00 0.94
#> lane1_3600STDY6167908_TAGTCGGT_L001_17236_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6167918_GCGCTGAT_L001_17236_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6167920_GAGGGCAG_L001_17236_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6167950_TAGCGAGA_L001_17236_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6167965_GGTAAGAG_L001_17236_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6167989_AGGATCTC_L001_17236_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6168016_CCTACCCG_L001_17236_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6168018_TATACATC_L001_17236_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6168023_GCTGGTTG_L001_17236_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6168040_AAACCCGT_L001_17236_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6168063_GTACGGAC_L001_17236_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6168064_CATTTTGC_L001_17236_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6168069_CTGCCTAG_L001_17236_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6168075_TGGTTGAC_L001_17236_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6168076_ACCTGCTG_L001_17236_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane4_3600STDY6184188_ACTTGATG_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184192_CTTGTACT_L004_17480_1     1  0.2537      0.938 0.92 0.00 0.08
#> lane4_3600STDY6184199_TCTGCTGT_L004_17480_1     1  0.2537      0.938 0.92 0.00 0.08
#> lane4_3600STDY6184200_TTGGAGGT_L004_17480_1     1  0.2537      0.938 0.92 0.00 0.08
#> lane4_3600STDY6184208_TACAGGAT_L004_17480_1     1  0.0892      0.960 0.98 0.00 0.02
#> lane4_3600STDY6184211_TAGTCTTG_L004_17480_1     1  0.2537      0.938 0.92 0.00 0.08
#> lane4_3600STDY6184212_TTCCATTG_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184213_TCGAAGTG_L004_17480_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane4_3600STDY6184215_TTGGTATG_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184216_TGAACTGG_L004_17480_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane4_3600STDY6184217_TACTTCGG_L004_17480_1     1  0.2537      0.938 0.92 0.00 0.08
#> lane4_3600STDY6184219_TCAGGAGG_L004_17480_1     1  0.2537      0.938 0.92 0.00 0.08
#> lane4_3600STDY6184222_TGTATGCG_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184223_TCATTGAG_L004_17480_1     1  0.0892      0.960 0.98 0.00 0.02
#> lane4_3600STDY6184224_TGGCTCAG_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184227_TACTAGTC_L004_17480_1     1  0.2537      0.938 0.92 0.00 0.08
#> lane4_3600STDY6184230_TATGTGGC_L004_17480_1     1  0.2537      0.938 0.92 0.00 0.08
#> lane4_3600STDY6184231_TTACTCGC_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184234_TGTTCTCC_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184238_TGACAGAC_L004_17480_1     1  0.2537      0.938 0.92 0.00 0.08
#> lane4_3600STDY6184239_TAGAACAC_L004_17480_1     1  0.2537      0.938 0.92 0.00 0.08
#> lane4_3600STDY6184240_TCATCCTA_L004_17480_1     1  0.2537      0.938 0.92 0.00 0.08
#> lane4_3600STDY6184244_TCTCTTCA_L004_17480_1     1  0.2537      0.938 0.92 0.00 0.08
#> lane4_3600STDY6184246_TGAAGCCA_L004_17480_1     1  0.2537      0.938 0.92 0.00 0.08
#> lane4_3600STDY6184247_TACCACCA_L004_17480_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane4_3600STDY6184248_TGCGTGAA_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184254_GGTCGTGT_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184256_GTACATCT_L004_17480_1     1  0.2537      0.938 0.92 0.00 0.08
#> lane4_3600STDY6184257_GAGGTGCT_L004_17480_1     3  0.0892      0.977 0.02 0.00 0.98
#> lane4_3600STDY6184258_GCATGGCT_L004_17480_1     1  0.1529      0.953 0.96 0.00 0.04
#> lane4_3600STDY6184259_GTTAGCCT_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184260_GTCGCTAT_L004_17480_1     2  0.0892      0.978 0.02 0.98 0.00
#> lane4_3600STDY6184261_GGAATGAT_L004_17480_1     3  0.5016      0.662 0.24 0.00 0.76
#> lane4_3600STDY6184262_GAGCCAAT_L004_17480_1     1  0.2537      0.938 0.92 0.00 0.08
#> lane4_3600STDY6184263_GCTCCTTG_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184264_GTAAGGTG_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184265_GAGGATGG_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184267_GGATTAGG_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184268_GATAGAGG_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184270_GCAATCCG_L004_17480_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane4_3600STDY6184271_GACCTTAG_L004_17480_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane4_3600STDY6184272_GCCTGTTC_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184273_GCACTGTC_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184275_GATTCATC_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184280_GCGATTAC_L004_17480_1     1  0.2537      0.938 0.92 0.00 0.08
#> lane4_3600STDY6184282_GGCACAAC_L004_17480_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane4_3600STDY6184283_GACACTTA_L004_17480_1     1  0.2537      0.938 0.92 0.00 0.08
#> lane4_3600STDY6184285_GGAGTCTA_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184286_GCTATGGA_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184287_GAGTGCGA_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184288_GTAACCGA_L004_17480_1     1  0.2537      0.938 0.92 0.00 0.08
#> lane4_3600STDY6184290_GCCTTACA_L004_17480_1     1  0.2537      0.938 0.92 0.00 0.08
#> lane4_3600STDY6184294_CGTTCGGT_L004_17480_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane4_3600STDY6184295_CACCAGGT_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184297_CCGTATCT_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184299_CAAGACCT_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184306_CCACTTGG_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184307_CTGTACGG_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184309_CACTCGAG_L004_17480_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane4_3600STDY6184311_CTTGCTTC_L004_17480_1     1  0.2537      0.938 0.92 0.00 0.08
#> lane4_3600STDY6184312_CATAGGTC_L004_17480_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane4_3600STDY6184313_CACATTGC_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184314_CGCTAAGC_L004_17480_1     1  0.2537      0.938 0.92 0.00 0.08
#> lane4_3600STDY6184317_CTCAAGAC_L004_17480_1     1  0.2537      0.938 0.92 0.00 0.08
#> lane4_3600STDY6184318_CGTGTCAC_L004_17480_1     1  0.2959      0.920 0.90 0.00 0.10
#> lane4_3600STDY6184319_CCATGCAC_L004_17480_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane4_3600STDY6184321_CAAGTAGA_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184322_CTCTCTCA_L004_17480_1     1  0.2537      0.938 0.92 0.00 0.08
#> lane4_3600STDY6184323_CGACTGCA_L004_17480_1     1  0.2537      0.938 0.92 0.00 0.08
#> lane4_3600STDY6184324_CCTGAGCA_L004_17480_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane4_3600STDY6184326_CGGAGGAA_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184328_AGGCAGCT_L004_17480_1     1  0.2537      0.938 0.92 0.00 0.08
#> lane4_3600STDY6184331_AGACCGTG_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184332_ACCTCTGG_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184336_ACTGTTAG_L004_17480_1     1  0.0892      0.960 0.98 0.00 0.02
#> lane4_3600STDY6184337_AAGAGTAG_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184338_ATTCGGAG_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184339_ACGCAATC_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184340_ACAAGTGC_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184341_ATGGATCC_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184342_AGAGGACC_L004_17480_1     2  0.2537      0.922 0.08 0.92 0.00
#> lane4_3600STDY6184343_ATCTCCAC_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184344_ATTGGCTA_L004_17480_1     1  0.2537      0.938 0.92 0.00 0.08
#> lane4_3600STDY6184346_AGGATTCA_L004_17480_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane4_3600STDY6184347_AACTGGCA_L004_17480_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane4_3600STDY6184348_ACAACGCA_L004_17480_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane4_3600STDY6184352_TCTCAGTG_L004_17480_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane4_3600STDY6184354_CCTAAGAT_L004_17480_1     1  0.2537      0.938 0.92 0.00 0.08
#> lane4_3600STDY6184355_CTCAGATA_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184356_CCCATAGG_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184357_GCTATGAC_L004_17480_1     2  0.2959      0.900 0.10 0.90 0.00
#> lane4_3600STDY6184358_GCTGTGAA_L004_17480_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane4_3600STDY6184359_ACCTTCAA_L004_17480_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane4_3600STDY6184360_ACAAAGCC_L004_17480_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane4_3600STDY6184361_CAAAACCG_L004_17480_1     1  0.2537      0.938 0.92 0.00 0.08
#> lane4_3600STDY6184363_AAGTCGTA_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184364_CATCCGTA_L004_17480_1     3  0.0892      0.977 0.02 0.00 0.98
#> lane4_3600STDY6184365_TTGTGTCT_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184366_TGCTCTAG_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184367_ACCCAACA_L004_17480_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane4_3600STDY6184368_CGATCTGA_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184369_GTTCCACG_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184370_ACTCTTTC_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184371_TATTGGAG_L004_17480_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane4_3600STDY6184372_TAAACATA_L004_17480_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane4_3600STDY6184373_GTAAGATA_L004_17480_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane4_3600STDY6184388_ACGGCAGC_L004_17480_1     1  0.2537      0.938 0.92 0.00 0.08
#> lane4_3600STDY6184389_AGAACTGA_L004_17480_1     1  0.2537      0.938 0.92 0.00 0.08
#> lane4_3600STDY6184390_CGCCTTTG_L004_17480_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane4_3600STDY6184391_TAAGGTCA_L004_17480_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane4_3600STDY6184392_ACGTTGGC_L004_17480_1     1  0.2537      0.938 0.92 0.00 0.08
#> lane4_3600STDY6184401_AGGACGAT_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184403_AGGTCTAA_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184408_GAGGGCAG_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184412_GCATCCGG_L004_17480_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane4_3600STDY6184413_GTCACCAG_L004_17480_1     1  0.2537      0.938 0.92 0.00 0.08
#> lane4_3600STDY6184414_GAGGTCGC_L004_17480_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane4_3600STDY6184415_AAGGGGTA_L004_17480_1     1  0.6280      0.232 0.54 0.00 0.46
#> lane4_3600STDY6184416_TTTTACGT_L004_17480_1     1  0.5706      0.592 0.68 0.00 0.32
#> lane4_3600STDY6184418_AGTGTAGT_L004_17480_1     1  0.2537      0.938 0.92 0.00 0.08
#> lane4_3600STDY6184419_GTGGCCAA_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184426_CTCGTCGA_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184433_CGCCAGTA_L004_17480_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane4_3600STDY6184435_TGACCCAC_L004_17480_1     1  0.2537      0.938 0.92 0.00 0.08
#> lane4_3600STDY6184437_CTTTTGAT_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184438_TAGCGAGA_L004_17480_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane4_3600STDY6184439_TTCGCAGG_L004_17480_1     1  0.2537      0.938 0.92 0.00 0.08
#> lane4_3600STDY6184440_TAGTTATT_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184442_GCGGGTCT_L004_17480_1     1  0.3340      0.899 0.88 0.00 0.12
#> lane4_3600STDY6184445_GTCTGAGG_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184446_TCTGGCGA_L004_17480_1     1  0.2537      0.938 0.92 0.00 0.08
#> lane4_3600STDY6184447_AATTTGCG_L004_17480_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane4_3600STDY6184448_TGGGTTGG_L004_17480_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane4_3600STDY6184449_AGTTGAAA_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184450_GACCGGAA_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184455_ATACAGGC_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184456_TGAGACTC_L004_17480_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane4_3600STDY6184457_ACTCAGGA_L004_17480_1     1  0.2537      0.938 0.92 0.00 0.08
#> lane4_3600STDY6184459_CTTGAATC_L004_17480_1     1  0.2959      0.920 0.90 0.00 0.10
#> lane4_3600STDY6184460_CCGCATGA_L004_17480_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane4_3600STDY6184461_AAGTAACA_L004_17480_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane4_3600STDY6184462_GTGGTACT_L004_17480_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane4_3600STDY6184463_AGCTGTGC_L004_17480_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane4_3600STDY6184464_TTACCTTC_L004_17480_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane4_3600STDY6184465_TCCGGGTA_L004_17480_1     1  0.2537      0.938 0.92 0.00 0.08
#> lane4_3600STDY6184466_CTACGTAA_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184467_TCGGACCG_L004_17480_1     1  0.2537      0.938 0.92 0.00 0.08
#> lane4_3600STDY6184471_AAGTGATA_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184473_TATTCTGG_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184474_AGCCGTGA_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184475_AAGCCTTC_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184480_TTGGAGCA_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184483_AATCGGGT_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184484_AGGTAGAC_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184486_CAGGCTCT_L004_17480_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane4_3600STDY6184487_AAAGCACG_L004_17480_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane4_3600STDY6184488_GTATACAC_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184489_GGACATAT_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184490_CGGTTGGG_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184491_GTCCGTGA_L004_17480_1     1  0.2537      0.938 0.92 0.00 0.08
#> lane4_3600STDY6184498_CGCCTGAT_L004_17480_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane4_3600STDY6184500_TAAGGGTG_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184501_GGTGTCGA_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184502_CCGTTAGG_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184503_TGGCAAAA_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184504_CCTACCCG_L004_17480_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane4_3600STDY6184505_AACAGCGC_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184507_AAGCGACT_L004_17480_1     1  0.2537      0.938 0.92 0.00 0.08
#> lane4_3600STDY6184508_GAAGCGCA_L004_17480_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane4_3600STDY6184509_ACCTCTAC_L004_17480_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane4_3600STDY6184510_GATTGCGT_L004_17480_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane4_3600STDY6184511_GCTGGTTG_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184512_ATCGTCCT_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184514_CGCACCTA_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184515_CTTCGGCT_L004_17480_1     1  0.2537      0.938 0.92 0.00 0.08
#> lane4_3600STDY6184522_AAACATCA_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184523_CCATAGCT_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184524_GTTATGGC_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184532_TGGGGCTT_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184533_CTGACTAC_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184534_AACTTTTA_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184535_AGGGATTC_L004_17480_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane4_3600STDY6184536_CCGAGTAG_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184538_GGAGTTGA_L004_17480_1     1  0.2537      0.938 0.92 0.00 0.08
#> lane4_3600STDY6184539_AGCTCATC_L004_17480_1     1  0.2537      0.938 0.92 0.00 0.08
#> lane4_3600STDY6184541_ACTGGTCG_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184542_GACGATTG_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184543_AGCGATGA_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184544_GAAGAGAT_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184545_CGTATGCA_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184546_CACGTGCG_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184548_GTTCCGCA_L004_17480_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane4_3600STDY6184551_GTACGGAC_L004_17480_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane4_3600STDY6184552_CATTTTGC_L004_17480_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane4_3600STDY6184553_TCCTCTCT_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184555_ACAGAAGA_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184557_CTGCCTAG_L004_17480_1     1  0.2537      0.938 0.92 0.00 0.08
#> lane4_3600STDY6184558_GAGCGCAT_L004_17480_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane4_3600STDY6184560_CCGATGTA_L004_17480_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane4_3600STDY6184562_CAAGGAGC_L004_17480_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane4_3600STDY6184563_TGGTTGAC_L004_17480_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane4_3600STDY6184564_ACCTGCTG_L004_17480_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6183797_ATCACGTT_L001_17592_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6183808_CTTGTACT_L001_17592_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6183810_TCTCGGTT_L001_17592_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6183816_TTGGAGGT_L001_17592_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6183820_TTGACTCT_L001_17592_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6183839_TCATTGAG_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183841_TATGCCAG_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183857_TGCTGATA_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183864_TGCGTGAA_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183865_GGTGAGTT_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183874_GCATGGCT_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183881_GAGGATGG_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183882_GTTGTCGG_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183884_GATAGAGG_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183885_GTGTGTCG_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183886_GCAATCCG_L001_17592_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6183887_GACCTTAG_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183888_GCCTGTTC_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183889_GCACTGTC_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183891_GATTCATC_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183898_GGCACAAC_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183905_GGCAAGCA_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183908_GCAGGTAA_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183909_GCGTCGAA_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183910_CGTTCGGT_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183911_CACCAGGT_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183912_CTGCGAGT_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183913_CCGTATCT_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183914_CGCTTCCT_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183927_CTTGCTTC_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183928_CATAGGTC_L001_17592_1     1  0.2537      0.938 0.92 0.00 0.08
#> lane1_3600STDY6183929_CACATTGC_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183932_CAGCTGAC_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183933_CTCAAGAC_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183934_CGTGTCAC_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183944_AGGCAGCT_L001_17592_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane1_3600STDY6183952_ACTGTTAG_L001_17592_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6183953_AAGAGTAG_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183956_ACAAGTGC_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183957_ATGGATCC_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183958_AGAGGACC_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183959_ATCTCCAC_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183960_ATTGGCTA_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183964_ACAACGCA_L001_17592_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6183965_CGGAAACA_L001_17592_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6183970_CCTAAGAT_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183975_ACCTTCAA_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183976_ACAAAGCC_L001_17592_1     1  0.0000      0.966 1.00 0.00 0.00
#> lane1_3600STDY6183977_CAAAACCG_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183978_GCTGGACA_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183979_AAGTCGTA_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183980_CATCCGTA_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183981_TTGTGTCT_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183982_TGCTCTAG_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183983_ACCCAACA_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183984_CGATCTGA_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183985_GTTCCACG_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183986_ACTCTTTC_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183987_TATTGGAG_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183988_TAAACATA_L001_17592_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6183989_GTAAGATA_L001_17592_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6183992_TGTCATCT_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183993_ATAGCTCT_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183994_AGTCCAAC_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183996_TCTGACGC_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183997_TGTCGACT_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183998_GTCACGTA_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6183999_TTGAGCGA_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184001_GTCAAGCT_L001_17592_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6184011_ACTTCGTA_L001_17592_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6184014_ACGTACTA_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184016_GCCTGCCC_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184018_CTTGACCG_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184019_AGGTCTAA_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184020_CGAGATCC_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184022_GCGCTGAT_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184023_TGCTGAAC_L001_17592_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6184034_AGTGTAGT_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184039_ACTTGGGG_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184040_GGCTGCTT_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184042_CTCGTCGA_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184043_TCTACAGT_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184044_CTTCTAGA_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184046_ATAAGACT_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184047_GTTTTTCG_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184051_TGACCCAC_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184058_GCGGGTCT_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184061_GTCTGAGG_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184062_TCTGGCGA_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184063_AATTTGCG_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184064_TGGGTTGG_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184065_AGTTGAAA_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184066_GACCGGAA_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184067_GATCGAAC_L001_17592_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6184068_GTATAGGG_L001_17592_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6184070_AGTCCGAT_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184071_ATACAGGC_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184078_GTGGTACT_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184079_AGCTGTGC_L001_17592_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6184081_TCCGGGTA_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184082_CTACGTAA_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184085_TTCTTAGC_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184086_TGAGTAAG_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184087_AAGTGATA_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184088_TCGATGCG_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184089_TATTCTGG_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184090_AGCCGTGA_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184091_AAGCCTTC_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184092_AGGTATCC_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184094_CTGTTTGA_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184095_GGAATTTC_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184102_CAGGCTCT_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184103_AAAGCACG_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184104_GTATACAC_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184105_GGACATAT_L001_17592_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6184106_CGGTTGGG_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184111_ATAACTAG_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184112_AATAGAGA_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184113_TCACCATT_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184114_CGCCTGAT_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184115_GCGTGAAC_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184116_TAAGGGTG_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184119_TGGCAAAA_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184126_GATTGCGT_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184130_CGCACCTA_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184132_CGAATCGA_L001_17592_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6184134_AGCTCTTT_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184135_TAATCCCT_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184136_AGGACACT_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184138_AAACATCA_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184140_GTTATGGC_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184141_ATCCCCTA_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184143_CAATTGTT_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184144_AAACCCGT_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184151_AGGGATTC_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184154_GGAGTTGA_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184156_TAATCAAC_L001_17592_1     2  0.0000      0.998 0.00 1.00 0.00
#> lane1_3600STDY6184158_GACGATTG_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184160_GAAGAGAT_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184163_GCTTAAAC_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184164_GTTCCGCA_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184167_GTACGGAC_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184170_AGCAACGA_L001_17592_1     3  0.0000      0.997 0.00 0.00 1.00
#> lane1_3600STDY6184180_ACCTGCTG_L001_17592_1     2  0.0000      0.998 0.00 1.00 0.00

show/hide code output

cbind(get_classes(res, k = 4), get_membership(res, k = 4))
#>                                             class entropy silhouette   p1   p2   p3   p4
#> lane1_3600STDY6077864_ATCACGTT_L001_15986_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6077865_CGATGTTT_L001_15986_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6077883_TTGGAGGT_L001_15986_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6077899_TGAACTGG_L001_15986_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6077904_TCCAGTCG_L001_15986_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6077911_TTCAGCTC_L001_15986_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6077914_TTACTCGC_L001_15986_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6077933_GATCTCTT_L001_15986_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6077934_GTGTCCTT_L001_15986_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077960_ATCACGTT_L003_15987_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077961_CGATGTTT_L003_15987_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077978_TCTGCTGT_L003_15987_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane3_3600STDY6077997_TCTCACGG_L003_15987_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078001_TGTATGCG_L003_15987_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane3_3600STDY6078027_TGCGTGAA_L003_15987_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167697_ACAGTGGT_L001_17236_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167700_ACTTGATG_L001_17236_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167706_TCTCGGTT_L001_17236_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167707_TAAGCGTT_L001_17236_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167710_TTCTGTGT_L001_17236_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167718_TTCCTGCT_L001_17236_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167724_TTCCATTG_L001_17236_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167734_TGTATGCG_L001_17236_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167758_TGAAGCCA_L001_17236_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167776_GTAAGGTG_L001_17236_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167778_GTTGTCGG_L001_17236_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167788_GTCTTGGC_L001_17236_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167810_CGCTTCCT_L001_17236_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167813_CCTAGTAT_L001_17236_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167844_ACCTCTGG_L001_17236_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167847_AGGTCACG_L001_17236_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167857_AATCCTGA_L001_17236_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167858_AGGATTCA_L001_17236_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167861_CGGAAACA_L001_17236_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167870_GCTGTGAA_L001_17236_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167871_ACCTTCAA_L001_17236_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167872_ACAAAGCC_L001_17236_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167873_CAAAACCG_L001_17236_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167879_ACCCAACA_L001_17236_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167883_TATTGGAG_L001_17236_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167884_TAAACATA_L001_17236_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167897_GTCAAGCT_L001_17236_1     3  0.1637    0.68119 0.06 0.00 0.94 0.00
#> lane1_3600STDY6167908_TAGTCGGT_L001_17236_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167918_GCGCTGAT_L001_17236_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167920_GAGGGCAG_L001_17236_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167950_TAGCGAGA_L001_17236_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167965_GGTAAGAG_L001_17236_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6167989_AGGATCTC_L001_17236_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6168016_CCTACCCG_L001_17236_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6168018_TATACATC_L001_17236_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6168023_GCTGGTTG_L001_17236_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6168040_AAACCCGT_L001_17236_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6168063_GTACGGAC_L001_17236_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6168064_CATTTTGC_L001_17236_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6168069_CTGCCTAG_L001_17236_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6168075_TGGTTGAC_L001_17236_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6168076_ACCTGCTG_L001_17236_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184188_ACTTGATG_L004_17480_1     1  0.4907    0.32665 0.58 0.00 0.00 0.42
#> lane4_3600STDY6184192_CTTGTACT_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184199_TCTGCTGT_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184200_TTGGAGGT_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184208_TACAGGAT_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184211_TAGTCTTG_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184212_TTCCATTG_L004_17480_1     3  0.5000    0.19295 0.50 0.00 0.50 0.00
#> lane4_3600STDY6184213_TCGAAGTG_L004_17480_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184215_TTGGTATG_L004_17480_1     1  0.0000    0.79025 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184216_TGAACTGG_L004_17480_1     2  0.4713    0.57510 0.00 0.64 0.00 0.36
#> lane4_3600STDY6184217_TACTTCGG_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184219_TCAGGAGG_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184222_TGTATGCG_L004_17480_1     1  0.4907    0.32665 0.58 0.00 0.00 0.42
#> lane4_3600STDY6184223_TCATTGAG_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184224_TGGCTCAG_L004_17480_1     1  0.0000    0.79025 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184227_TACTAGTC_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184230_TATGTGGC_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184231_TTACTCGC_L004_17480_1     1  0.0000    0.79025 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184234_TGTTCTCC_L004_17480_1     1  0.0000    0.79025 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184238_TGACAGAC_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184239_TAGAACAC_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184240_TCATCCTA_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184244_TCTCTTCA_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184246_TGAAGCCA_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184247_TACCACCA_L004_17480_1     2  0.1637    0.92092 0.00 0.94 0.00 0.06
#> lane4_3600STDY6184248_TGCGTGAA_L004_17480_1     1  0.0000    0.79025 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184254_GGTCGTGT_L004_17480_1     1  0.0000    0.79025 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184256_GTACATCT_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184257_GAGGTGCT_L004_17480_1     3  0.3172    0.63663 0.16 0.00 0.84 0.00
#> lane4_3600STDY6184258_GCATGGCT_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184259_GTTAGCCT_L004_17480_1     1  0.4855    0.16327 0.60 0.00 0.40 0.00
#> lane4_3600STDY6184260_GTCGCTAT_L004_17480_1     4  0.0000    0.43261 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184261_GGAATGAT_L004_17480_1     3  0.2011    0.67135 0.08 0.00 0.92 0.00
#> lane4_3600STDY6184262_GAGCCAAT_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184263_GCTCCTTG_L004_17480_1     1  0.4522    0.38906 0.68 0.00 0.32 0.00
#> lane4_3600STDY6184264_GTAAGGTG_L004_17480_1     1  0.4907    0.32665 0.58 0.00 0.00 0.42
#> lane4_3600STDY6184265_GAGGATGG_L004_17480_1     1  0.3801    0.58267 0.78 0.00 0.22 0.00
#> lane4_3600STDY6184267_GGATTAGG_L004_17480_1     1  0.2345    0.72908 0.90 0.00 0.10 0.00
#> lane4_3600STDY6184268_GATAGAGG_L004_17480_1     1  0.0000    0.79025 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184270_GCAATCCG_L004_17480_1     4  0.5487    0.77147 0.02 0.00 0.40 0.58
#> lane4_3600STDY6184271_GACCTTAG_L004_17480_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184272_GCCTGTTC_L004_17480_1     1  0.3801    0.58203 0.78 0.00 0.00 0.22
#> lane4_3600STDY6184273_GCACTGTC_L004_17480_1     1  0.0000    0.79025 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184275_GATTCATC_L004_17480_1     1  0.0000    0.79025 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184280_GCGATTAC_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184282_GGCACAAC_L004_17480_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184283_GACACTTA_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184285_GGAGTCTA_L004_17480_1     1  0.0000    0.79025 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184286_GCTATGGA_L004_17480_1     1  0.0000    0.79025 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184287_GAGTGCGA_L004_17480_1     1  0.4907    0.09422 0.58 0.00 0.42 0.00
#> lane4_3600STDY6184288_GTAACCGA_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184290_GCCTTACA_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184294_CGTTCGGT_L004_17480_1     4  0.4907    0.12727 0.00 0.42 0.00 0.58
#> lane4_3600STDY6184295_CACCAGGT_L004_17480_1     1  0.2011    0.74252 0.92 0.00 0.08 0.00
#> lane4_3600STDY6184297_CCGTATCT_L004_17480_1     1  0.1211    0.76082 0.96 0.00 0.00 0.04
#> lane4_3600STDY6184299_CAAGACCT_L004_17480_1     1  0.0000    0.79025 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184306_CCACTTGG_L004_17480_1     1  0.4277    0.47427 0.72 0.00 0.28 0.00
#> lane4_3600STDY6184307_CTGTACGG_L004_17480_1     1  0.3801    0.58310 0.78 0.00 0.22 0.00
#> lane4_3600STDY6184309_CACTCGAG_L004_17480_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184311_CTTGCTTC_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184312_CATAGGTC_L004_17480_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184313_CACATTGC_L004_17480_1     1  0.0000    0.79025 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184314_CGCTAAGC_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184317_CTCAAGAC_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184318_CGTGTCAC_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184319_CCATGCAC_L004_17480_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184321_CAAGTAGA_L004_17480_1     1  0.0000    0.79025 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184322_CTCTCTCA_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184323_CGACTGCA_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184324_CCTGAGCA_L004_17480_1     2  0.4907    0.48536 0.00 0.58 0.00 0.42
#> lane4_3600STDY6184326_CGGAGGAA_L004_17480_1     1  0.4522    0.38997 0.68 0.00 0.32 0.00
#> lane4_3600STDY6184328_AGGCAGCT_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184331_AGACCGTG_L004_17480_1     1  0.0000    0.79025 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184332_ACCTCTGG_L004_17480_1     1  0.0000    0.79025 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184336_ACTGTTAG_L004_17480_1     4  0.7602   -0.00651 0.20 0.00 0.38 0.42
#> lane4_3600STDY6184337_AAGAGTAG_L004_17480_1     1  0.0000    0.79025 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184338_ATTCGGAG_L004_17480_1     1  0.0707    0.77981 0.98 0.00 0.02 0.00
#> lane4_3600STDY6184339_ACGCAATC_L004_17480_1     1  0.0000    0.79025 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184340_ACAAGTGC_L004_17480_1     1  0.4977   -0.06322 0.54 0.00 0.46 0.00
#> lane4_3600STDY6184341_ATGGATCC_L004_17480_1     1  0.4994   -0.13607 0.52 0.00 0.48 0.00
#> lane4_3600STDY6184342_AGAGGACC_L004_17480_1     1  0.5535    0.30336 0.56 0.02 0.00 0.42
#> lane4_3600STDY6184343_ATCTCCAC_L004_17480_1     1  0.0000    0.79025 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184344_ATTGGCTA_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184346_AGGATTCA_L004_17480_1     2  0.4907    0.48536 0.00 0.58 0.00 0.42
#> lane4_3600STDY6184347_AACTGGCA_L004_17480_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184348_ACAACGCA_L004_17480_1     2  0.4406    0.65755 0.00 0.70 0.00 0.30
#> lane4_3600STDY6184352_TCTCAGTG_L004_17480_1     2  0.4907    0.48536 0.00 0.58 0.00 0.42
#> lane4_3600STDY6184354_CCTAAGAT_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184355_CTCAGATA_L004_17480_1     1  0.0000    0.79025 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184356_CCCATAGG_L004_17480_1     1  0.0000    0.79025 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184357_GCTATGAC_L004_17480_1     1  0.5535    0.30386 0.56 0.02 0.00 0.42
#> lane4_3600STDY6184358_GCTGTGAA_L004_17480_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184359_ACCTTCAA_L004_17480_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184360_ACAAAGCC_L004_17480_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184361_CAAAACCG_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184363_AAGTCGTA_L004_17480_1     1  0.4907    0.32665 0.58 0.00 0.00 0.42
#> lane4_3600STDY6184364_CATCCGTA_L004_17480_1     4  0.5606    0.66263 0.02 0.00 0.48 0.50
#> lane4_3600STDY6184365_TTGTGTCT_L004_17480_1     1  0.3172    0.64929 0.84 0.00 0.00 0.16
#> lane4_3600STDY6184366_TGCTCTAG_L004_17480_1     1  0.0000    0.79025 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184367_ACCCAACA_L004_17480_1     2  0.1211    0.93830 0.00 0.96 0.00 0.04
#> lane4_3600STDY6184368_CGATCTGA_L004_17480_1     1  0.2647    0.71376 0.88 0.00 0.12 0.00
#> lane4_3600STDY6184369_GTTCCACG_L004_17480_1     3  0.4977    0.31739 0.46 0.00 0.54 0.00
#> lane4_3600STDY6184370_ACTCTTTC_L004_17480_1     1  0.0000    0.79025 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184371_TATTGGAG_L004_17480_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184372_TAAACATA_L004_17480_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184373_GTAAGATA_L004_17480_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184388_ACGGCAGC_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184389_AGAACTGA_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184390_CGCCTTTG_L004_17480_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184391_TAAGGTCA_L004_17480_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184392_ACGTTGGC_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184401_AGGACGAT_L004_17480_1     1  0.0000    0.79025 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184403_AGGTCTAA_L004_17480_1     1  0.0000    0.79025 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184408_GAGGGCAG_L004_17480_1     1  0.0000    0.79025 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184412_GCATCCGG_L004_17480_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane4_3600STDY6184413_GTCACCAG_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184414_GAGGTCGC_L004_17480_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184415_AAGGGGTA_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184416_TTTTACGT_L004_17480_1     3  0.4790    0.46370 0.38 0.00 0.62 0.00
#> lane4_3600STDY6184418_AGTGTAGT_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184419_GTGGCCAA_L004_17480_1     3  0.4994    0.25803 0.48 0.00 0.52 0.00
#> lane4_3600STDY6184426_CTCGTCGA_L004_17480_1     1  0.4994   -0.13607 0.52 0.00 0.48 0.00
#> lane4_3600STDY6184433_CGCCAGTA_L004_17480_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184435_TGACCCAC_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184437_CTTTTGAT_L004_17480_1     1  0.0000    0.79025 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184438_TAGCGAGA_L004_17480_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184439_TTCGCAGG_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184440_TAGTTATT_L004_17480_1     1  0.4624    0.33762 0.66 0.00 0.34 0.00
#> lane4_3600STDY6184442_GCGGGTCT_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184445_GTCTGAGG_L004_17480_1     1  0.0000    0.79025 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184446_TCTGGCGA_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184447_AATTTGCG_L004_17480_1     2  0.3172    0.82288 0.00 0.84 0.00 0.16
#> lane4_3600STDY6184448_TGGGTTGG_L004_17480_1     3  0.1211    0.69051 0.04 0.00 0.96 0.00
#> lane4_3600STDY6184449_AGTTGAAA_L004_17480_1     4  0.4907   -0.08051 0.42 0.00 0.00 0.58
#> lane4_3600STDY6184450_GACCGGAA_L004_17480_1     4  0.4907   -0.08051 0.42 0.00 0.00 0.58
#> lane4_3600STDY6184455_ATACAGGC_L004_17480_1     1  0.0000    0.79025 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184456_TGAGACTC_L004_17480_1     2  0.4907    0.48536 0.00 0.58 0.00 0.42
#> lane4_3600STDY6184457_ACTCAGGA_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184459_CTTGAATC_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184460_CCGCATGA_L004_17480_1     4  0.4907    0.12727 0.00 0.42 0.00 0.58
#> lane4_3600STDY6184461_AAGTAACA_L004_17480_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184462_GTGGTACT_L004_17480_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184463_AGCTGTGC_L004_17480_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184464_TTACCTTC_L004_17480_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184465_TCCGGGTA_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184466_CTACGTAA_L004_17480_1     4  0.5661    0.16438 0.22 0.00 0.08 0.70
#> lane4_3600STDY6184467_TCGGACCG_L004_17480_1     3  0.7121    0.34454 0.30 0.00 0.54 0.16
#> lane4_3600STDY6184471_AAGTGATA_L004_17480_1     1  0.0000    0.79025 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184473_TATTCTGG_L004_17480_1     1  0.0000    0.79025 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184474_AGCCGTGA_L004_17480_1     1  0.4790    0.22397 0.62 0.00 0.38 0.00
#> lane4_3600STDY6184475_AAGCCTTC_L004_17480_1     1  0.0000    0.79025 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184480_TTGGAGCA_L004_17480_1     1  0.2647    0.71348 0.88 0.00 0.12 0.00
#> lane4_3600STDY6184483_AATCGGGT_L004_17480_1     3  0.5000    0.19295 0.50 0.00 0.50 0.00
#> lane4_3600STDY6184484_AGGTAGAC_L004_17480_1     1  0.4855    0.16485 0.60 0.00 0.40 0.00
#> lane4_3600STDY6184486_CAGGCTCT_L004_17480_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184487_AAAGCACG_L004_17480_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184488_GTATACAC_L004_17480_1     1  0.4948    0.30358 0.56 0.00 0.00 0.44
#> lane4_3600STDY6184489_GGACATAT_L004_17480_1     1  0.0000    0.79025 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184490_CGGTTGGG_L004_17480_1     1  0.0000    0.79025 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184491_GTCCGTGA_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184498_CGCCTGAT_L004_17480_1     2  0.4855    0.51628 0.00 0.60 0.00 0.40
#> lane4_3600STDY6184500_TAAGGGTG_L004_17480_1     1  0.4977   -0.06137 0.54 0.00 0.46 0.00
#> lane4_3600STDY6184501_GGTGTCGA_L004_17480_1     1  0.0000    0.79025 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184502_CCGTTAGG_L004_17480_1     1  0.0000    0.79025 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184503_TGGCAAAA_L004_17480_1     1  0.0000    0.79025 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184504_CCTACCCG_L004_17480_1     2  0.4406    0.65755 0.00 0.70 0.00 0.30
#> lane4_3600STDY6184505_AACAGCGC_L004_17480_1     1  0.0707    0.77981 0.98 0.00 0.02 0.00
#> lane4_3600STDY6184507_AAGCGACT_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184508_GAAGCGCA_L004_17480_1     2  0.1637    0.92093 0.00 0.94 0.00 0.06
#> lane4_3600STDY6184509_ACCTCTAC_L004_17480_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184510_GATTGCGT_L004_17480_1     3  0.0707    0.67935 0.00 0.00 0.98 0.02
#> lane4_3600STDY6184511_GCTGGTTG_L004_17480_1     1  0.0000    0.79025 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184512_ATCGTCCT_L004_17480_1     1  0.4977   -0.06198 0.54 0.00 0.46 0.00
#> lane4_3600STDY6184514_CGCACCTA_L004_17480_1     3  0.5000    0.19710 0.50 0.00 0.50 0.00
#> lane4_3600STDY6184515_CTTCGGCT_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184522_AAACATCA_L004_17480_1     1  0.0000    0.79025 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184523_CCATAGCT_L004_17480_1     1  0.2345    0.70903 0.90 0.00 0.00 0.10
#> lane4_3600STDY6184524_GTTATGGC_L004_17480_1     1  0.0000    0.79025 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184532_TGGGGCTT_L004_17480_1     1  0.5000   -0.20711 0.50 0.00 0.50 0.00
#> lane4_3600STDY6184533_CTGACTAC_L004_17480_1     1  0.4855    0.16327 0.60 0.00 0.40 0.00
#> lane4_3600STDY6184534_AACTTTTA_L004_17480_1     1  0.4790    0.22591 0.62 0.00 0.38 0.00
#> lane4_3600STDY6184535_AGGGATTC_L004_17480_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184536_CCGAGTAG_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184538_GGAGTTGA_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184539_AGCTCATC_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184541_ACTGGTCG_L004_17480_1     1  0.0000    0.79025 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184542_GACGATTG_L004_17480_1     1  0.0000    0.79025 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184543_AGCGATGA_L004_17480_1     1  0.0000    0.79025 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184544_GAAGAGAT_L004_17480_1     1  0.0000    0.79025 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184545_CGTATGCA_L004_17480_1     1  0.4907    0.32665 0.58 0.00 0.00 0.42
#> lane4_3600STDY6184546_CACGTGCG_L004_17480_1     1  0.0000    0.79025 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184548_GTTCCGCA_L004_17480_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184551_GTACGGAC_L004_17480_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184552_CATTTTGC_L004_17480_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184553_TCCTCTCT_L004_17480_1     1  0.4277    0.47752 0.72 0.00 0.28 0.00
#> lane4_3600STDY6184555_ACAGAAGA_L004_17480_1     1  0.2345    0.72881 0.90 0.00 0.10 0.00
#> lane4_3600STDY6184557_CTGCCTAG_L004_17480_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane4_3600STDY6184558_GAGCGCAT_L004_17480_1     2  0.3400    0.80174 0.00 0.82 0.00 0.18
#> lane4_3600STDY6184560_CCGATGTA_L004_17480_1     1  0.4907    0.32665 0.58 0.00 0.00 0.42
#> lane4_3600STDY6184562_CAAGGAGC_L004_17480_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184563_TGGTTGAC_L004_17480_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184564_ACCTGCTG_L004_17480_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183797_ATCACGTT_L001_17592_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183808_CTTGTACT_L001_17592_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183810_TCTCGGTT_L001_17592_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183816_TTGGAGGT_L001_17592_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183820_TTGACTCT_L001_17592_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183839_TCATTGAG_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183841_TATGCCAG_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183857_TGCTGATA_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183864_TGCGTGAA_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183865_GGTGAGTT_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183874_GCATGGCT_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183881_GAGGATGG_L001_17592_1     4  0.4907    0.78942 0.00 0.00 0.42 0.58
#> lane1_3600STDY6183882_GTTGTCGG_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183884_GATAGAGG_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183885_GTGTGTCG_L001_17592_1     3  0.4855   -0.44264 0.00 0.00 0.60 0.40
#> lane1_3600STDY6183886_GCAATCCG_L001_17592_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183887_GACCTTAG_L001_17592_1     4  0.4907    0.78942 0.00 0.00 0.42 0.58
#> lane1_3600STDY6183888_GCCTGTTC_L001_17592_1     4  0.4907    0.78942 0.00 0.00 0.42 0.58
#> lane1_3600STDY6183889_GCACTGTC_L001_17592_1     4  0.4907    0.78942 0.00 0.00 0.42 0.58
#> lane1_3600STDY6183891_GATTCATC_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183898_GGCACAAC_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183905_GGCAAGCA_L001_17592_1     4  0.4907    0.78942 0.00 0.00 0.42 0.58
#> lane1_3600STDY6183908_GCAGGTAA_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183909_GCGTCGAA_L001_17592_1     4  0.4907    0.78942 0.00 0.00 0.42 0.58
#> lane1_3600STDY6183910_CGTTCGGT_L001_17592_1     4  0.4907    0.78942 0.00 0.00 0.42 0.58
#> lane1_3600STDY6183911_CACCAGGT_L001_17592_1     4  0.4907    0.78942 0.00 0.00 0.42 0.58
#> lane1_3600STDY6183912_CTGCGAGT_L001_17592_1     4  0.4907    0.78942 0.00 0.00 0.42 0.58
#> lane1_3600STDY6183913_CCGTATCT_L001_17592_1     4  0.4907    0.78942 0.00 0.00 0.42 0.58
#> lane1_3600STDY6183914_CGCTTCCT_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183927_CTTGCTTC_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183928_CATAGGTC_L001_17592_1     3  0.4907    0.42011 0.42 0.00 0.58 0.00
#> lane1_3600STDY6183929_CACATTGC_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183932_CAGCTGAC_L001_17592_1     4  0.4907    0.78942 0.00 0.00 0.42 0.58
#> lane1_3600STDY6183933_CTCAAGAC_L001_17592_1     3  0.4855   -0.44264 0.00 0.00 0.60 0.40
#> lane1_3600STDY6183934_CGTGTCAC_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183944_AGGCAGCT_L001_17592_1     1  0.3172    0.67001 0.84 0.00 0.16 0.00
#> lane1_3600STDY6183952_ACTGTTAG_L001_17592_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183953_AAGAGTAG_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183956_ACAAGTGC_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183957_ATGGATCC_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183958_AGAGGACC_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183959_ATCTCCAC_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183960_ATTGGCTA_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183964_ACAACGCA_L001_17592_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183965_CGGAAACA_L001_17592_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183970_CCTAAGAT_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183975_ACCTTCAA_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183976_ACAAAGCC_L001_17592_1     1  0.4855    0.35352 0.60 0.00 0.00 0.40
#> lane1_3600STDY6183977_CAAAACCG_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183978_GCTGGACA_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183979_AAGTCGTA_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183980_CATCCGTA_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183981_TTGTGTCT_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183982_TGCTCTAG_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183983_ACCCAACA_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183984_CGATCTGA_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183985_GTTCCACG_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183986_ACTCTTTC_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183987_TATTGGAG_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183988_TAAACATA_L001_17592_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183989_GTAAGATA_L001_17592_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183992_TGTCATCT_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183993_ATAGCTCT_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183994_AGTCCAAC_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183996_TCTGACGC_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183997_TGTCGACT_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183998_GTCACGTA_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183999_TTGAGCGA_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184001_GTCAAGCT_L001_17592_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6184011_ACTTCGTA_L001_17592_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6184014_ACGTACTA_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184016_GCCTGCCC_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184018_CTTGACCG_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184019_AGGTCTAA_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184020_CGAGATCC_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184022_GCGCTGAT_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184023_TGCTGAAC_L001_17592_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6184034_AGTGTAGT_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184039_ACTTGGGG_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184040_GGCTGCTT_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184042_CTCGTCGA_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184043_TCTACAGT_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184044_CTTCTAGA_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184046_ATAAGACT_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184047_GTTTTTCG_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184051_TGACCCAC_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184058_GCGGGTCT_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184061_GTCTGAGG_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184062_TCTGGCGA_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184063_AATTTGCG_L001_17592_1     4  0.4907    0.78942 0.00 0.00 0.42 0.58
#> lane1_3600STDY6184064_TGGGTTGG_L001_17592_1     4  0.4907    0.78942 0.00 0.00 0.42 0.58
#> lane1_3600STDY6184065_AGTTGAAA_L001_17592_1     4  0.4907    0.78942 0.00 0.00 0.42 0.58
#> lane1_3600STDY6184066_GACCGGAA_L001_17592_1     4  0.4907    0.78942 0.00 0.00 0.42 0.58
#> lane1_3600STDY6184067_GATCGAAC_L001_17592_1     4  0.4907    0.12727 0.00 0.42 0.00 0.58
#> lane1_3600STDY6184068_GTATAGGG_L001_17592_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6184070_AGTCCGAT_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184071_ATACAGGC_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184078_GTGGTACT_L001_17592_1     4  0.4907    0.78942 0.00 0.00 0.42 0.58
#> lane1_3600STDY6184079_AGCTGTGC_L001_17592_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6184081_TCCGGGTA_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184082_CTACGTAA_L001_17592_1     4  0.4907    0.78942 0.00 0.00 0.42 0.58
#> lane1_3600STDY6184085_TTCTTAGC_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184086_TGAGTAAG_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184087_AAGTGATA_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184088_TCGATGCG_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184089_TATTCTGG_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184090_AGCCGTGA_L001_17592_1     4  0.4907    0.78942 0.00 0.00 0.42 0.58
#> lane1_3600STDY6184091_AAGCCTTC_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184092_AGGTATCC_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184094_CTGTTTGA_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184095_GGAATTTC_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184102_CAGGCTCT_L001_17592_1     4  0.4907    0.78942 0.00 0.00 0.42 0.58
#> lane1_3600STDY6184103_AAAGCACG_L001_17592_1     3  0.4855   -0.44264 0.00 0.00 0.60 0.40
#> lane1_3600STDY6184104_GTATACAC_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184105_GGACATAT_L001_17592_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6184106_CGGTTGGG_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184111_ATAACTAG_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184112_AATAGAGA_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184113_TCACCATT_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184114_CGCCTGAT_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184115_GCGTGAAC_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184116_TAAGGGTG_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184119_TGGCAAAA_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184126_GATTGCGT_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184130_CGCACCTA_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184132_CGAATCGA_L001_17592_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6184134_AGCTCTTT_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184135_TAATCCCT_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184136_AGGACACT_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184138_AAACATCA_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184140_GTTATGGC_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184141_ATCCCCTA_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184143_CAATTGTT_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184144_AAACCCGT_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184151_AGGGATTC_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184154_GGAGTTGA_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184156_TAATCAAC_L001_17592_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00
#> lane1_3600STDY6184158_GACGATTG_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184160_GAAGAGAT_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184163_GCTTAAAC_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184164_GTTCCGCA_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184167_GTACGGAC_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184170_AGCAACGA_L001_17592_1     3  0.0000    0.70895 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184180_ACCTGCTG_L001_17592_1     2  0.0000    0.97131 0.00 1.00 0.00 0.00

Heatmaps for the consensus matrix. It visualizes the probability of two samples to be in a same group.

consensus_heatmap(res, k = 2)

plot of chunk tab-node-02-consensus-heatmap-1

consensus_heatmap(res, k = 3)

plot of chunk tab-node-02-consensus-heatmap-2

consensus_heatmap(res, k = 4)

plot of chunk tab-node-02-consensus-heatmap-3

Heatmaps for the membership of samples in all partitions to see how consistent they are:

membership_heatmap(res, k = 2)

plot of chunk tab-node-02-membership-heatmap-1

membership_heatmap(res, k = 3)

plot of chunk tab-node-02-membership-heatmap-2

membership_heatmap(res, k = 4)

plot of chunk tab-node-02-membership-heatmap-3

As soon as the classes for columns are determined, the signatures that are significantly different between subgroups can be looked for. Following are the heatmaps for signatures.

Signature heatmaps where rows are scaled:

get_signatures(res, k = 2)

plot of chunk tab-node-02-get-signatures-1

get_signatures(res, k = 3)

plot of chunk tab-node-02-get-signatures-2

get_signatures(res, k = 4)

plot of chunk tab-node-02-get-signatures-3

Signature heatmaps where rows are not scaled:

get_signatures(res, k = 2, scale_rows = FALSE)

plot of chunk tab-node-02-get-signatures-no-scale-1

get_signatures(res, k = 3, scale_rows = FALSE)

plot of chunk tab-node-02-get-signatures-no-scale-2

get_signatures(res, k = 4, scale_rows = FALSE)

plot of chunk tab-node-02-get-signatures-no-scale-3

Compare the overlap of signatures from different k:

compare_signatures(res)

plot of chunk node-02-signature_compare

get_signature() returns a data frame invisibly. To get the list of signatures, the function call should be assigned to a variable explicitly. In following code, if plot argument is set to FALSE, no heatmap is plotted while only the differential analysis is performed.

# code only for demonstration
tb = get_signature(res, k = ..., plot = FALSE)

An example of the output of tb is:

#>   which_row         fdr    mean_1    mean_2 scaled_mean_1 scaled_mean_2 km
#> 1        38 0.042760348  8.373488  9.131774    -0.5533452     0.5164555  1
#> 2        40 0.018707592  7.106213  8.469186    -0.6173731     0.5762149  1
#> 3        55 0.019134737 10.221463 11.207825    -0.6159697     0.5749050  1
#> 4        59 0.006059896  5.921854  7.869574    -0.6899429     0.6439467  1
#> 5        60 0.018055526  8.928898 10.211722    -0.6204761     0.5791110  1
#> 6        98 0.009384629 15.714769 14.887706     0.6635654    -0.6193277  2
...

The columns in tb are:

  1. which_row: row indices corresponding to the input matrix.
  2. fdr: FDR for the differential test.
  3. mean_x: The mean value in group x.
  4. scaled_mean_x: The mean value in group x after rows are scaled.
  5. km: Row groups if k-means clustering is applied to rows (which is done by automatically selecting number of clusters).

If there are too many signatures, top_signatures = ... can be set to only show the signatures with the highest FDRs:

# code only for demonstration
# e.g. to show the top 500 most significant rows
tb = get_signature(res, k = ..., top_signatures = 500)

If the signatures are defined as these which are uniquely high in current group, diff_method argument can be set to "uniquely_high_in_one_group":

# code only for demonstration
tb = get_signature(res, k = ..., diff_method = "uniquely_high_in_one_group")

UMAP plot which shows how samples are separated.

dimension_reduction(res, k = 2, method = "UMAP")

plot of chunk tab-node-02-dimension-reduction-1

dimension_reduction(res, k = 3, method = "UMAP")

plot of chunk tab-node-02-dimension-reduction-2

dimension_reduction(res, k = 4, method = "UMAP")

plot of chunk tab-node-02-dimension-reduction-3

Following heatmap shows how subgroups are split when increasing k:

collect_classes(res)

plot of chunk node-02-collect-classes

Test correlation between subgroups and known annotations. If the known annotation is numeric, one-way ANOVA test is applied, and if the known annotation is discrete, chi-squared contingency table test is applied.

test_to_known_factors(res)
#>             n_sample phenotype(p-value) k
#> ATC:skmeans      403           8.43e-27 2
#> ATC:skmeans      402           1.20e-26 3
#> ATC:skmeans      301           1.71e-19 4

If matrix rows can be associated to genes, consider to use functional_enrichment(res, ...) to perform function enrichment for the signature genes. See this vignette for more detailed explanations.


Node021

Parent node: Node02. Child nodes: Node0111-leaf , Node0112-leaf , Node0113-leaf , Node0121 , Node0122-leaf , Node0123 , Node0211-leaf , Node0212-leaf , Node0213-leaf , Node0221-leaf , Node0222 , Node0223-leaf , Node0224-leaf , Node0231-leaf , Node0232-leaf , Node0311-leaf , Node0312-leaf , Node0313-leaf , Node0341-leaf , Node0342 .

The object with results only for a single top-value method and a single partitioning method can be extracted as:

res = res_rh["021"]

A summary of res and all the functions that can be applied to it:

res
#> A 'ConsensusPartition' object with k = 2, 3, 4.
#>   On a matrix with 15481 rows and 148 columns.
#>   Top rows (1548) are extracted by 'ATC' method.
#>   Subgroups are detected by 'skmeans' method.
#>   Performed in total 150 partitions by row resampling.
#>   Best k for subgroups seems to be 4.
#> 
#> Following methods can be applied to this 'ConsensusPartition' object:
#>  [1] "cola_report"             "collect_classes"         "collect_plots"          
#>  [4] "collect_stats"           "colnames"                "compare_partitions"     
#>  [7] "compare_signatures"      "consensus_heatmap"       "dimension_reduction"    
#> [10] "functional_enrichment"   "get_anno_col"            "get_anno"               
#> [13] "get_classes"             "get_consensus"           "get_matrix"             
#> [16] "get_membership"          "get_param"               "get_signatures"         
#> [19] "get_stats"               "is_best_k"               "is_stable_k"            
#> [22] "membership_heatmap"      "ncol"                    "nrow"                   
#> [25] "plot_ecdf"               "predict_classes"         "rownames"               
#> [28] "select_partition_number" "show"                    "suggest_best_k"         
#> [31] "test_to_known_factors"   "top_rows_heatmap"

collect_plots() function collects all the plots made from res for all k (number of subgroups) into one single page to provide an easy and fast comparison between different k.

collect_plots(res)

plot of chunk node-021-collect-plots

The plots are:

All the plots in panels can be made by individual functions and they are plotted later in this section.

select_partition_number() produces several plots showing different statistics for choosing “optimized” k. There are following statistics:

The detailed explanations of these statistics can be found in the cola vignette.

Generally speaking, higher 1-PAC score, higher mean silhouette score or higher concordance corresponds to better partition. Rand index and Jaccard index measure how similar the current partition is compared to partition with k-1. If they are too similar, we won't accept k is better than k-1.

select_partition_number(res)

plot of chunk node-021-select-partition-number

The numeric values for all these statistics can be obtained by get_stats().

get_stats(res)
#>   k 1-PAC mean_silhouette concordance area_increased  Rand Jaccard
#> 2 2 1.000           0.999       0.999         0.4993 0.501   0.501
#> 3 3 1.000           0.970       0.988         0.3132 0.803   0.621
#> 4 4 0.931           0.927       0.957         0.0722 0.933   0.814

suggest_best_k() suggests the best \(k\) based on these statistics. The rules are as follows:

suggest_best_k(res)
#> [1] 4
#> attr(,"optional")
#> [1] 2 3

There is also optional best \(k\) = 2 3 that is worth to check.

Following is the table of the partitions (You need to click the show/hide code output link to see it). The membership matrix (columns with name p*) is inferred by clue::cl_consensus() function with the SE method. Basically the value in the membership matrix represents the probability to belong to a certain group. The finall subgroup label for an item is determined with the group with highest probability it belongs to.

In get_classes() function, the entropy is calculated from the membership matrix and the silhouette score is calculated from the consensus matrix.

show/hide code output

cbind(get_classes(res, k = 2), get_membership(res, k = 2))
#>                                             class entropy silhouette   p1   p2
#> lane4_3600STDY6184188_ACTTGATG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184192_CTTGTACT_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184199_TCTGCTGT_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184200_TTGGAGGT_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184208_TACAGGAT_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184211_TAGTCTTG_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184212_TTCCATTG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184215_TTGGTATG_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184217_TACTTCGG_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184219_TCAGGAGG_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184222_TGTATGCG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184223_TCATTGAG_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184224_TGGCTCAG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184227_TACTAGTC_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184230_TATGTGGC_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184231_TTACTCGC_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184234_TGTTCTCC_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184238_TGACAGAC_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184239_TAGAACAC_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184240_TCATCCTA_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184244_TCTCTTCA_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184246_TGAAGCCA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184248_TGCGTGAA_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184254_GGTCGTGT_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184256_GTACATCT_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184258_GCATGGCT_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184259_GTTAGCCT_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184262_GAGCCAAT_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184263_GCTCCTTG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184264_GTAAGGTG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184265_GAGGATGG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184267_GGATTAGG_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184268_GATAGAGG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184272_GCCTGTTC_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184273_GCACTGTC_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184275_GATTCATC_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184280_GCGATTAC_L004_17480_1     1   0.402      0.913 0.92 0.08
#> lane4_3600STDY6184283_GACACTTA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184285_GGAGTCTA_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184286_GCTATGGA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184287_GAGTGCGA_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184288_GTAACCGA_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184290_GCCTTACA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184295_CACCAGGT_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184297_CCGTATCT_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184299_CAAGACCT_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184306_CCACTTGG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184307_CTGTACGG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184311_CTTGCTTC_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184313_CACATTGC_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184314_CGCTAAGC_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184317_CTCAAGAC_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184318_CGTGTCAC_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184321_CAAGTAGA_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184322_CTCTCTCA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184323_CGACTGCA_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184326_CGGAGGAA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184328_AGGCAGCT_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184331_AGACCGTG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184332_ACCTCTGG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184336_ACTGTTAG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184337_AAGAGTAG_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184338_ATTCGGAG_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184339_ACGCAATC_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184340_ACAAGTGC_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184341_ATGGATCC_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184343_ATCTCCAC_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184344_ATTGGCTA_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184354_CCTAAGAT_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184355_CTCAGATA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184356_CCCATAGG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184361_CAAAACCG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184363_AAGTCGTA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184365_TTGTGTCT_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184366_TGCTCTAG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184368_CGATCTGA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184369_GTTCCACG_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184370_ACTCTTTC_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184388_ACGGCAGC_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184389_AGAACTGA_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184392_ACGTTGGC_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184401_AGGACGAT_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184403_AGGTCTAA_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184408_GAGGGCAG_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184413_GTCACCAG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184415_AAGGGGTA_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184416_TTTTACGT_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184418_AGTGTAGT_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184419_GTGGCCAA_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184426_CTCGTCGA_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184435_TGACCCAC_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184437_CTTTTGAT_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184439_TTCGCAGG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184440_TAGTTATT_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184442_GCGGGTCT_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184445_GTCTGAGG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184446_TCTGGCGA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184449_AGTTGAAA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184450_GACCGGAA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184455_ATACAGGC_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184457_ACTCAGGA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184459_CTTGAATC_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184465_TCCGGGTA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184466_CTACGTAA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184467_TCGGACCG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184471_AAGTGATA_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184473_TATTCTGG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184474_AGCCGTGA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184475_AAGCCTTC_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184480_TTGGAGCA_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184483_AATCGGGT_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184484_AGGTAGAC_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184488_GTATACAC_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184489_GGACATAT_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184490_CGGTTGGG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184491_GTCCGTGA_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184500_TAAGGGTG_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184501_GGTGTCGA_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184502_CCGTTAGG_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184503_TGGCAAAA_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184505_AACAGCGC_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184507_AAGCGACT_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184511_GCTGGTTG_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184512_ATCGTCCT_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184514_CGCACCTA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184515_CTTCGGCT_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184522_AAACATCA_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184523_CCATAGCT_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184524_GTTATGGC_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184532_TGGGGCTT_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184533_CTGACTAC_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184534_AACTTTTA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184536_CCGAGTAG_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184538_GGAGTTGA_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184539_AGCTCATC_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184541_ACTGGTCG_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184542_GACGATTG_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184543_AGCGATGA_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184544_GAAGAGAT_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184545_CGTATGCA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane4_3600STDY6184546_CACGTGCG_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184553_TCCTCTCT_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184555_ACAGAAGA_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184557_CTGCCTAG_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184560_CCGATGTA_L004_17480_1     1   0.000      0.999 1.00 0.00
#> lane1_3600STDY6183928_CATAGGTC_L001_17592_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6183944_AGGCAGCT_L001_17592_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6183976_ACAAAGCC_L001_17592_1     1   0.000      0.999 1.00 0.00

show/hide code output

cbind(get_classes(res, k = 3), get_membership(res, k = 3))
#>                                             class entropy silhouette   p1   p2   p3
#> lane4_3600STDY6184188_ACTTGATG_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184192_CTTGTACT_L004_17480_1     1  0.0892     0.9742 0.98 0.02 0.00
#> lane4_3600STDY6184199_TCTGCTGT_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184200_TTGGAGGT_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184208_TACAGGAT_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184211_TAGTCTTG_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184212_TTCCATTG_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184215_TTGGTATG_L004_17480_1     3  0.0000     0.9775 0.00 0.00 1.00
#> lane4_3600STDY6184217_TACTTCGG_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184219_TCAGGAGG_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184222_TGTATGCG_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184223_TCATTGAG_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184224_TGGCTCAG_L004_17480_1     3  0.4002     0.7987 0.16 0.00 0.84
#> lane4_3600STDY6184227_TACTAGTC_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184230_TATGTGGC_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184231_TTACTCGC_L004_17480_1     3  0.0000     0.9775 0.00 0.00 1.00
#> lane4_3600STDY6184234_TGTTCTCC_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184238_TGACAGAC_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184239_TAGAACAC_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184240_TCATCCTA_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184244_TCTCTTCA_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184246_TGAAGCCA_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184248_TGCGTGAA_L004_17480_1     2  0.5016     0.6764 0.00 0.76 0.24
#> lane4_3600STDY6184254_GGTCGTGT_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184256_GTACATCT_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184258_GCATGGCT_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184259_GTTAGCCT_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184262_GAGCCAAT_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184263_GCTCCTTG_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184264_GTAAGGTG_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184265_GAGGATGG_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184267_GGATTAGG_L004_17480_1     3  0.1529     0.9413 0.00 0.04 0.96
#> lane4_3600STDY6184268_GATAGAGG_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184272_GCCTGTTC_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184273_GCACTGTC_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184275_GATTCATC_L004_17480_1     3  0.0000     0.9775 0.00 0.00 1.00
#> lane4_3600STDY6184280_GCGATTAC_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184283_GACACTTA_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184285_GGAGTCTA_L004_17480_1     2  0.6192     0.2590 0.00 0.58 0.42
#> lane4_3600STDY6184286_GCTATGGA_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184287_GAGTGCGA_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184288_GTAACCGA_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184290_GCCTTACA_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184295_CACCAGGT_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184297_CCGTATCT_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184299_CAAGACCT_L004_17480_1     1  0.4555     0.7472 0.80 0.00 0.20
#> lane4_3600STDY6184306_CCACTTGG_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184307_CTGTACGG_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184311_CTTGCTTC_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184313_CACATTGC_L004_17480_1     3  0.0000     0.9775 0.00 0.00 1.00
#> lane4_3600STDY6184314_CGCTAAGC_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184317_CTCAAGAC_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184318_CGTGTCAC_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184321_CAAGTAGA_L004_17480_1     3  0.0000     0.9775 0.00 0.00 1.00
#> lane4_3600STDY6184322_CTCTCTCA_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184323_CGACTGCA_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184326_CGGAGGAA_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184328_AGGCAGCT_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184331_AGACCGTG_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184332_ACCTCTGG_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184336_ACTGTTAG_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184337_AAGAGTAG_L004_17480_1     3  0.0000     0.9775 0.00 0.00 1.00
#> lane4_3600STDY6184338_ATTCGGAG_L004_17480_1     3  0.2066     0.9210 0.00 0.06 0.94
#> lane4_3600STDY6184339_ACGCAATC_L004_17480_1     3  0.0000     0.9775 0.00 0.00 1.00
#> lane4_3600STDY6184340_ACAAGTGC_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184341_ATGGATCC_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184343_ATCTCCAC_L004_17480_1     3  0.0000     0.9775 0.00 0.00 1.00
#> lane4_3600STDY6184344_ATTGGCTA_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184354_CCTAAGAT_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184355_CTCAGATA_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184356_CCCATAGG_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184361_CAAAACCG_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184363_AAGTCGTA_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184365_TTGTGTCT_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184366_TGCTCTAG_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184368_CGATCTGA_L004_17480_1     1  0.0892     0.9743 0.98 0.02 0.00
#> lane4_3600STDY6184369_GTTCCACG_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184370_ACTCTTTC_L004_17480_1     3  0.0000     0.9775 0.00 0.00 1.00
#> lane4_3600STDY6184388_ACGGCAGC_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184389_AGAACTGA_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184392_ACGTTGGC_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184401_AGGACGAT_L004_17480_1     3  0.0000     0.9775 0.00 0.00 1.00
#> lane4_3600STDY6184403_AGGTCTAA_L004_17480_1     3  0.0000     0.9775 0.00 0.00 1.00
#> lane4_3600STDY6184408_GAGGGCAG_L004_17480_1     3  0.0000     0.9775 0.00 0.00 1.00
#> lane4_3600STDY6184413_GTCACCAG_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184415_AAGGGGTA_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184416_TTTTACGT_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184418_AGTGTAGT_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184419_GTGGCCAA_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184426_CTCGTCGA_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184435_TGACCCAC_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184437_CTTTTGAT_L004_17480_1     3  0.0000     0.9775 0.00 0.00 1.00
#> lane4_3600STDY6184439_TTCGCAGG_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184440_TAGTTATT_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184442_GCGGGTCT_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184445_GTCTGAGG_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184446_TCTGGCGA_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184449_AGTTGAAA_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184450_GACCGGAA_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184455_ATACAGGC_L004_17480_1     3  0.0000     0.9775 0.00 0.00 1.00
#> lane4_3600STDY6184457_ACTCAGGA_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184459_CTTGAATC_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184465_TCCGGGTA_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184466_CTACGTAA_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184467_TCGGACCG_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184471_AAGTGATA_L004_17480_1     3  0.0000     0.9775 0.00 0.00 1.00
#> lane4_3600STDY6184473_TATTCTGG_L004_17480_1     3  0.0000     0.9775 0.00 0.00 1.00
#> lane4_3600STDY6184474_AGCCGTGA_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184475_AAGCCTTC_L004_17480_1     3  0.0000     0.9775 0.00 0.00 1.00
#> lane4_3600STDY6184480_TTGGAGCA_L004_17480_1     3  0.0000     0.9775 0.00 0.00 1.00
#> lane4_3600STDY6184483_AATCGGGT_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184484_AGGTAGAC_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184488_GTATACAC_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184489_GGACATAT_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184490_CGGTTGGG_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184491_GTCCGTGA_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184500_TAAGGGTG_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184501_GGTGTCGA_L004_17480_1     3  0.0000     0.9775 0.00 0.00 1.00
#> lane4_3600STDY6184502_CCGTTAGG_L004_17480_1     3  0.0000     0.9775 0.00 0.00 1.00
#> lane4_3600STDY6184503_TGGCAAAA_L004_17480_1     3  0.0000     0.9775 0.00 0.00 1.00
#> lane4_3600STDY6184505_AACAGCGC_L004_17480_1     3  0.6302     0.0619 0.00 0.48 0.52
#> lane4_3600STDY6184507_AAGCGACT_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184511_GCTGGTTG_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184512_ATCGTCCT_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184514_CGCACCTA_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane4_3600STDY6184515_CTTCGGCT_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184522_AAACATCA_L004_17480_1     3  0.0000     0.9775 0.00 0.00 1.00
#> lane4_3600STDY6184523_CCATAGCT_L004_17480_1     3  0.0000     0.9775 0.00 0.00 1.00
#> lane4_3600STDY6184524_GTTATGGC_L004_17480_1     3  0.0000     0.9775 0.00 0.00 1.00
#> lane4_3600STDY6184532_TGGGGCTT_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184533_CTGACTAC_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184534_AACTTTTA_L004_17480_1     1  0.2537     0.9070 0.92 0.08 0.00
#> lane4_3600STDY6184536_CCGAGTAG_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184538_GGAGTTGA_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184539_AGCTCATC_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184541_ACTGGTCG_L004_17480_1     3  0.0000     0.9775 0.00 0.00 1.00
#> lane4_3600STDY6184542_GACGATTG_L004_17480_1     3  0.0000     0.9775 0.00 0.00 1.00
#> lane4_3600STDY6184543_AGCGATGA_L004_17480_1     3  0.0000     0.9775 0.00 0.00 1.00
#> lane4_3600STDY6184544_GAAGAGAT_L004_17480_1     3  0.0000     0.9775 0.00 0.00 1.00
#> lane4_3600STDY6184545_CGTATGCA_L004_17480_1     3  0.0000     0.9775 0.00 0.00 1.00
#> lane4_3600STDY6184546_CACGTGCG_L004_17480_1     3  0.0000     0.9775 0.00 0.00 1.00
#> lane4_3600STDY6184553_TCCTCTCT_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184555_ACAGAAGA_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184557_CTGCCTAG_L004_17480_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane4_3600STDY6184560_CCGATGTA_L004_17480_1     1  0.0000     0.9944 1.00 0.00 0.00
#> lane1_3600STDY6183928_CATAGGTC_L001_17592_1     2  0.0000     0.9867 0.00 1.00 0.00
#> lane1_3600STDY6183944_AGGCAGCT_L001_17592_1     3  0.0000     0.9775 0.00 0.00 1.00
#> lane1_3600STDY6183976_ACAAAGCC_L001_17592_1     1  0.0000     0.9944 1.00 0.00 0.00

show/hide code output

cbind(get_classes(res, k = 4), get_membership(res, k = 4))
#>                                             class entropy silhouette   p1   p2   p3   p4
#> lane4_3600STDY6184188_ACTTGATG_L004_17480_1     1  0.0000      0.965 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184192_CTTGTACT_L004_17480_1     1  0.2011      0.922 0.92 0.00 0.00 0.08
#> lane4_3600STDY6184199_TCTGCTGT_L004_17480_1     2  0.0000      0.955 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184200_TTGGAGGT_L004_17480_1     2  0.0000      0.955 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184208_TACAGGAT_L004_17480_1     2  0.0000      0.955 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184211_TAGTCTTG_L004_17480_1     2  0.0000      0.955 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184212_TTCCATTG_L004_17480_1     1  0.0000      0.965 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184215_TTGGTATG_L004_17480_1     4  0.4134      0.736 0.00 0.00 0.26 0.74
#> lane4_3600STDY6184217_TACTTCGG_L004_17480_1     2  0.1211      0.941 0.00 0.96 0.00 0.04
#> lane4_3600STDY6184219_TCAGGAGG_L004_17480_1     2  0.0000      0.955 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184222_TGTATGCG_L004_17480_1     1  0.0000      0.965 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184223_TCATTGAG_L004_17480_1     2  0.0000      0.955 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184224_TGGCTCAG_L004_17480_1     4  0.2335      0.888 0.02 0.00 0.06 0.92
#> lane4_3600STDY6184227_TACTAGTC_L004_17480_1     2  0.0000      0.955 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184230_TATGTGGC_L004_17480_1     2  0.0000      0.955 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184231_TTACTCGC_L004_17480_1     4  0.3610      0.816 0.00 0.00 0.20 0.80
#> lane4_3600STDY6184234_TGTTCTCC_L004_17480_1     1  0.0000      0.965 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184238_TGACAGAC_L004_17480_1     2  0.1637      0.930 0.00 0.94 0.00 0.06
#> lane4_3600STDY6184239_TAGAACAC_L004_17480_1     2  0.0000      0.955 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184240_TCATCCTA_L004_17480_1     2  0.0000      0.955 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184244_TCTCTTCA_L004_17480_1     2  0.1211      0.941 0.00 0.96 0.00 0.04
#> lane4_3600STDY6184246_TGAAGCCA_L004_17480_1     1  0.0000      0.965 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184248_TGCGTGAA_L004_17480_1     4  0.4284      0.722 0.00 0.20 0.02 0.78
#> lane4_3600STDY6184254_GGTCGTGT_L004_17480_1     1  0.0000      0.965 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184256_GTACATCT_L004_17480_1     2  0.0707      0.949 0.00 0.98 0.00 0.02
#> lane4_3600STDY6184258_GCATGGCT_L004_17480_1     1  0.0000      0.965 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184259_GTTAGCCT_L004_17480_1     1  0.0707      0.955 0.98 0.00 0.00 0.02
#> lane4_3600STDY6184262_GAGCCAAT_L004_17480_1     2  0.2011      0.916 0.00 0.92 0.00 0.08
#> lane4_3600STDY6184263_GCTCCTTG_L004_17480_1     1  0.3801      0.738 0.78 0.00 0.00 0.22
#> lane4_3600STDY6184264_GTAAGGTG_L004_17480_1     1  0.0000      0.965 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184265_GAGGATGG_L004_17480_1     1  0.0000      0.965 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184267_GGATTAGG_L004_17480_1     4  0.3972      0.847 0.00 0.08 0.08 0.84
#> lane4_3600STDY6184268_GATAGAGG_L004_17480_1     4  0.2011      0.850 0.08 0.00 0.00 0.92
#> lane4_3600STDY6184272_GCCTGTTC_L004_17480_1     1  0.0000      0.965 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184273_GCACTGTC_L004_17480_1     1  0.2345      0.911 0.90 0.00 0.00 0.10
#> lane4_3600STDY6184275_GATTCATC_L004_17480_1     3  0.0000      0.987 0.00 0.00 1.00 0.00
#> lane4_3600STDY6184280_GCGATTAC_L004_17480_1     2  0.2011      0.916 0.00 0.92 0.00 0.08
#> lane4_3600STDY6184283_GACACTTA_L004_17480_1     1  0.0000      0.965 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184285_GGAGTCTA_L004_17480_1     4  0.2411      0.879 0.00 0.04 0.04 0.92
#> lane4_3600STDY6184286_GCTATGGA_L004_17480_1     1  0.0000      0.965 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184287_GAGTGCGA_L004_17480_1     2  0.0000      0.955 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184288_GTAACCGA_L004_17480_1     2  0.0000      0.955 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184290_GCCTTACA_L004_17480_1     1  0.2011      0.922 0.92 0.00 0.00 0.08
#> lane4_3600STDY6184295_CACCAGGT_L004_17480_1     1  0.0707      0.955 0.98 0.00 0.00 0.02
#> lane4_3600STDY6184297_CCGTATCT_L004_17480_1     1  0.0000      0.965 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184299_CAAGACCT_L004_17480_1     4  0.2011      0.850 0.08 0.00 0.00 0.92
#> lane4_3600STDY6184306_CCACTTGG_L004_17480_1     1  0.0000      0.965 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184307_CTGTACGG_L004_17480_1     1  0.0000      0.965 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184311_CTTGCTTC_L004_17480_1     2  0.0000      0.955 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184313_CACATTGC_L004_17480_1     3  0.0000      0.987 0.00 0.00 1.00 0.00
#> lane4_3600STDY6184314_CGCTAAGC_L004_17480_1     2  0.2011      0.916 0.00 0.92 0.00 0.08
#> lane4_3600STDY6184317_CTCAAGAC_L004_17480_1     1  0.0000      0.965 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184318_CGTGTCAC_L004_17480_1     1  0.1637      0.935 0.94 0.00 0.00 0.06
#> lane4_3600STDY6184321_CAAGTAGA_L004_17480_1     3  0.0000      0.987 0.00 0.00 1.00 0.00
#> lane4_3600STDY6184322_CTCTCTCA_L004_17480_1     1  0.1211      0.947 0.96 0.00 0.00 0.04
#> lane4_3600STDY6184323_CGACTGCA_L004_17480_1     2  0.0000      0.955 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184326_CGGAGGAA_L004_17480_1     1  0.0707      0.956 0.98 0.00 0.00 0.02
#> lane4_3600STDY6184328_AGGCAGCT_L004_17480_1     2  0.0707      0.949 0.00 0.98 0.00 0.02
#> lane4_3600STDY6184331_AGACCGTG_L004_17480_1     1  0.0000      0.965 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184332_ACCTCTGG_L004_17480_1     4  0.2921      0.790 0.14 0.00 0.00 0.86
#> lane4_3600STDY6184336_ACTGTTAG_L004_17480_1     1  0.0000      0.965 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184337_AAGAGTAG_L004_17480_1     3  0.0000      0.987 0.00 0.00 1.00 0.00
#> lane4_3600STDY6184338_ATTCGGAG_L004_17480_1     2  0.4855      0.350 0.00 0.60 0.40 0.00
#> lane4_3600STDY6184339_ACGCAATC_L004_17480_1     4  0.2647      0.878 0.00 0.00 0.12 0.88
#> lane4_3600STDY6184340_ACAAGTGC_L004_17480_1     1  0.0000      0.965 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184341_ATGGATCC_L004_17480_1     2  0.0000      0.955 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184343_ATCTCCAC_L004_17480_1     3  0.0000      0.987 0.00 0.00 1.00 0.00
#> lane4_3600STDY6184344_ATTGGCTA_L004_17480_1     2  0.0000      0.955 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184354_CCTAAGAT_L004_17480_1     2  0.0707      0.949 0.00 0.98 0.00 0.02
#> lane4_3600STDY6184355_CTCAGATA_L004_17480_1     1  0.4277      0.626 0.72 0.00 0.00 0.28
#> lane4_3600STDY6184356_CCCATAGG_L004_17480_1     1  0.0000      0.965 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184361_CAAAACCG_L004_17480_1     1  0.0000      0.965 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184363_AAGTCGTA_L004_17480_1     1  0.0000      0.965 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184365_TTGTGTCT_L004_17480_1     1  0.0000      0.965 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184366_TGCTCTAG_L004_17480_1     1  0.3610      0.772 0.80 0.00 0.00 0.20
#> lane4_3600STDY6184368_CGATCTGA_L004_17480_1     1  0.2706      0.910 0.90 0.02 0.00 0.08
#> lane4_3600STDY6184369_GTTCCACG_L004_17480_1     2  0.0000      0.955 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184370_ACTCTTTC_L004_17480_1     3  0.0000      0.987 0.00 0.00 1.00 0.00
#> lane4_3600STDY6184388_ACGGCAGC_L004_17480_1     2  0.0000      0.955 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184389_AGAACTGA_L004_17480_1     2  0.0000      0.955 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184392_ACGTTGGC_L004_17480_1     2  0.2011      0.916 0.00 0.92 0.00 0.08
#> lane4_3600STDY6184401_AGGACGAT_L004_17480_1     3  0.1637      0.934 0.00 0.00 0.94 0.06
#> lane4_3600STDY6184403_AGGTCTAA_L004_17480_1     3  0.0000      0.987 0.00 0.00 1.00 0.00
#> lane4_3600STDY6184408_GAGGGCAG_L004_17480_1     3  0.0707      0.971 0.00 0.00 0.98 0.02
#> lane4_3600STDY6184413_GTCACCAG_L004_17480_1     1  0.1637      0.936 0.94 0.00 0.00 0.06
#> lane4_3600STDY6184415_AAGGGGTA_L004_17480_1     2  0.0707      0.949 0.00 0.98 0.00 0.02
#> lane4_3600STDY6184416_TTTTACGT_L004_17480_1     1  0.1637      0.936 0.94 0.00 0.00 0.06
#> lane4_3600STDY6184418_AGTGTAGT_L004_17480_1     2  0.0000      0.955 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184419_GTGGCCAA_L004_17480_1     2  0.0000      0.955 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184426_CTCGTCGA_L004_17480_1     2  0.0000      0.955 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184435_TGACCCAC_L004_17480_1     2  0.0707      0.949 0.00 0.98 0.00 0.02
#> lane4_3600STDY6184437_CTTTTGAT_L004_17480_1     4  0.2335      0.889 0.00 0.02 0.06 0.92
#> lane4_3600STDY6184439_TTCGCAGG_L004_17480_1     1  0.1637      0.936 0.94 0.00 0.00 0.06
#> lane4_3600STDY6184440_TAGTTATT_L004_17480_1     1  0.0000      0.965 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184442_GCGGGTCT_L004_17480_1     2  0.0000      0.955 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184445_GTCTGAGG_L004_17480_1     1  0.3172      0.821 0.84 0.00 0.00 0.16
#> lane4_3600STDY6184446_TCTGGCGA_L004_17480_1     1  0.1211      0.947 0.96 0.00 0.00 0.04
#> lane4_3600STDY6184449_AGTTGAAA_L004_17480_1     1  0.0000      0.965 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184450_GACCGGAA_L004_17480_1     1  0.0000      0.965 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184455_ATACAGGC_L004_17480_1     3  0.2011      0.910 0.00 0.00 0.92 0.08
#> lane4_3600STDY6184457_ACTCAGGA_L004_17480_1     2  0.2706      0.897 0.02 0.90 0.00 0.08
#> lane4_3600STDY6184459_CTTGAATC_L004_17480_1     1  0.0000      0.965 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184465_TCCGGGTA_L004_17480_1     1  0.0000      0.965 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184466_CTACGTAA_L004_17480_1     1  0.0000      0.965 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184467_TCGGACCG_L004_17480_1     1  0.0000      0.965 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184471_AAGTGATA_L004_17480_1     4  0.3400      0.836 0.00 0.00 0.18 0.82
#> lane4_3600STDY6184473_TATTCTGG_L004_17480_1     4  0.2011      0.890 0.00 0.00 0.08 0.92
#> lane4_3600STDY6184474_AGCCGTGA_L004_17480_1     1  0.0000      0.965 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184475_AAGCCTTC_L004_17480_1     4  0.2011      0.890 0.00 0.00 0.08 0.92
#> lane4_3600STDY6184480_TTGGAGCA_L004_17480_1     3  0.2011      0.911 0.00 0.00 0.92 0.08
#> lane4_3600STDY6184483_AATCGGGT_L004_17480_1     2  0.0000      0.955 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184484_AGGTAGAC_L004_17480_1     2  0.0000      0.955 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184488_GTATACAC_L004_17480_1     1  0.0000      0.965 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184489_GGACATAT_L004_17480_1     1  0.0000      0.965 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184490_CGGTTGGG_L004_17480_1     1  0.0000      0.965 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184491_GTCCGTGA_L004_17480_1     2  0.0000      0.955 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184500_TAAGGGTG_L004_17480_1     2  0.2345      0.873 0.00 0.90 0.00 0.10
#> lane4_3600STDY6184501_GGTGTCGA_L004_17480_1     3  0.0000      0.987 0.00 0.00 1.00 0.00
#> lane4_3600STDY6184502_CCGTTAGG_L004_17480_1     3  0.0000      0.987 0.00 0.00 1.00 0.00
#> lane4_3600STDY6184503_TGGCAAAA_L004_17480_1     3  0.0000      0.987 0.00 0.00 1.00 0.00
#> lane4_3600STDY6184505_AACAGCGC_L004_17480_1     2  0.5383      0.672 0.00 0.74 0.16 0.10
#> lane4_3600STDY6184507_AAGCGACT_L004_17480_1     1  0.2011      0.922 0.92 0.00 0.00 0.08
#> lane4_3600STDY6184511_GCTGGTTG_L004_17480_1     1  0.0000      0.965 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184512_ATCGTCCT_L004_17480_1     1  0.2011      0.922 0.92 0.00 0.00 0.08
#> lane4_3600STDY6184514_CGCACCTA_L004_17480_1     1  0.1637      0.936 0.94 0.00 0.00 0.06
#> lane4_3600STDY6184515_CTTCGGCT_L004_17480_1     2  0.1637      0.930 0.00 0.94 0.00 0.06
#> lane4_3600STDY6184522_AAACATCA_L004_17480_1     3  0.0000      0.987 0.00 0.00 1.00 0.00
#> lane4_3600STDY6184523_CCATAGCT_L004_17480_1     3  0.0000      0.987 0.00 0.00 1.00 0.00
#> lane4_3600STDY6184524_GTTATGGC_L004_17480_1     3  0.0000      0.987 0.00 0.00 1.00 0.00
#> lane4_3600STDY6184532_TGGGGCTT_L004_17480_1     2  0.4277      0.605 0.00 0.72 0.00 0.28
#> lane4_3600STDY6184533_CTGACTAC_L004_17480_1     2  0.0707      0.949 0.00 0.98 0.00 0.02
#> lane4_3600STDY6184534_AACTTTTA_L004_17480_1     1  0.3972      0.830 0.84 0.08 0.00 0.08
#> lane4_3600STDY6184536_CCGAGTAG_L004_17480_1     2  0.1637      0.930 0.00 0.94 0.00 0.06
#> lane4_3600STDY6184538_GGAGTTGA_L004_17480_1     2  0.1637      0.930 0.00 0.94 0.00 0.06
#> lane4_3600STDY6184539_AGCTCATC_L004_17480_1     2  0.0000      0.955 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184541_ACTGGTCG_L004_17480_1     3  0.0000      0.987 0.00 0.00 1.00 0.00
#> lane4_3600STDY6184542_GACGATTG_L004_17480_1     3  0.0000      0.987 0.00 0.00 1.00 0.00
#> lane4_3600STDY6184543_AGCGATGA_L004_17480_1     3  0.0000      0.987 0.00 0.00 1.00 0.00
#> lane4_3600STDY6184544_GAAGAGAT_L004_17480_1     3  0.0000      0.987 0.00 0.00 1.00 0.00
#> lane4_3600STDY6184545_CGTATGCA_L004_17480_1     3  0.0707      0.969 0.00 0.00 0.98 0.02
#> lane4_3600STDY6184546_CACGTGCG_L004_17480_1     3  0.0000      0.987 0.00 0.00 1.00 0.00
#> lane4_3600STDY6184553_TCCTCTCT_L004_17480_1     2  0.2345      0.869 0.00 0.90 0.10 0.00
#> lane4_3600STDY6184555_ACAGAAGA_L004_17480_1     2  0.4079      0.751 0.00 0.80 0.02 0.18
#> lane4_3600STDY6184557_CTGCCTAG_L004_17480_1     2  0.0000      0.955 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184560_CCGATGTA_L004_17480_1     1  0.0707      0.954 0.98 0.00 0.00 0.02
#> lane1_3600STDY6183928_CATAGGTC_L001_17592_1     2  0.0000      0.955 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183944_AGGCAGCT_L001_17592_1     4  0.2345      0.886 0.00 0.00 0.10 0.90
#> lane1_3600STDY6183976_ACAAAGCC_L001_17592_1     1  0.0000      0.965 1.00 0.00 0.00 0.00

Heatmaps for the consensus matrix. It visualizes the probability of two samples to be in a same group.

consensus_heatmap(res, k = 2)

plot of chunk tab-node-021-consensus-heatmap-1

consensus_heatmap(res, k = 3)

plot of chunk tab-node-021-consensus-heatmap-2

consensus_heatmap(res, k = 4)

plot of chunk tab-node-021-consensus-heatmap-3

Heatmaps for the membership of samples in all partitions to see how consistent they are:

membership_heatmap(res, k = 2)

plot of chunk tab-node-021-membership-heatmap-1

membership_heatmap(res, k = 3)

plot of chunk tab-node-021-membership-heatmap-2

membership_heatmap(res, k = 4)

plot of chunk tab-node-021-membership-heatmap-3

As soon as the classes for columns are determined, the signatures that are significantly different between subgroups can be looked for. Following are the heatmaps for signatures.

Signature heatmaps where rows are scaled:

get_signatures(res, k = 2)

plot of chunk tab-node-021-get-signatures-1

get_signatures(res, k = 3)

plot of chunk tab-node-021-get-signatures-2

get_signatures(res, k = 4)

plot of chunk tab-node-021-get-signatures-3

Signature heatmaps where rows are not scaled:

get_signatures(res, k = 2, scale_rows = FALSE)

plot of chunk tab-node-021-get-signatures-no-scale-1

get_signatures(res, k = 3, scale_rows = FALSE)

plot of chunk tab-node-021-get-signatures-no-scale-2

get_signatures(res, k = 4, scale_rows = FALSE)

plot of chunk tab-node-021-get-signatures-no-scale-3

Compare the overlap of signatures from different k:

compare_signatures(res)

plot of chunk node-021-signature_compare

get_signature() returns a data frame invisibly. To get the list of signatures, the function call should be assigned to a variable explicitly. In following code, if plot argument is set to FALSE, no heatmap is plotted while only the differential analysis is performed.

# code only for demonstration
tb = get_signature(res, k = ..., plot = FALSE)

An example of the output of tb is:

#>   which_row         fdr    mean_1    mean_2 scaled_mean_1 scaled_mean_2 km
#> 1        38 0.042760348  8.373488  9.131774    -0.5533452     0.5164555  1
#> 2        40 0.018707592  7.106213  8.469186    -0.6173731     0.5762149  1
#> 3        55 0.019134737 10.221463 11.207825    -0.6159697     0.5749050  1
#> 4        59 0.006059896  5.921854  7.869574    -0.6899429     0.6439467  1
#> 5        60 0.018055526  8.928898 10.211722    -0.6204761     0.5791110  1
#> 6        98 0.009384629 15.714769 14.887706     0.6635654    -0.6193277  2
...

The columns in tb are:

  1. which_row: row indices corresponding to the input matrix.
  2. fdr: FDR for the differential test.
  3. mean_x: The mean value in group x.
  4. scaled_mean_x: The mean value in group x after rows are scaled.
  5. km: Row groups if k-means clustering is applied to rows (which is done by automatically selecting number of clusters).

If there are too many signatures, top_signatures = ... can be set to only show the signatures with the highest FDRs:

# code only for demonstration
# e.g. to show the top 500 most significant rows
tb = get_signature(res, k = ..., top_signatures = 500)

If the signatures are defined as these which are uniquely high in current group, diff_method argument can be set to "uniquely_high_in_one_group":

# code only for demonstration
tb = get_signature(res, k = ..., diff_method = "uniquely_high_in_one_group")

UMAP plot which shows how samples are separated.

dimension_reduction(res, k = 2, method = "UMAP")

plot of chunk tab-node-021-dimension-reduction-1

dimension_reduction(res, k = 3, method = "UMAP")

plot of chunk tab-node-021-dimension-reduction-2

dimension_reduction(res, k = 4, method = "UMAP")

plot of chunk tab-node-021-dimension-reduction-3

Following heatmap shows how subgroups are split when increasing k:

collect_classes(res)

plot of chunk node-021-collect-classes

Test correlation between subgroups and known annotations. If the known annotation is numeric, one-way ANOVA test is applied, and if the known annotation is discrete, chi-squared contingency table test is applied.

test_to_known_factors(res)
#>             n_sample phenotype(p-value) k
#> ATC:skmeans      148                 NA 2
#> ATC:skmeans      146                 NA 3
#> ATC:skmeans      147                 NA 4

If matrix rows can be associated to genes, consider to use functional_enrichment(res, ...) to perform function enrichment for the signature genes. See this vignette for more detailed explanations.


Node022

Parent node: Node02. Child nodes: Node0111-leaf , Node0112-leaf , Node0113-leaf , Node0121 , Node0122-leaf , Node0123 , Node0211-leaf , Node0212-leaf , Node0213-leaf , Node0221-leaf , Node0222 , Node0223-leaf , Node0224-leaf , Node0231-leaf , Node0232-leaf , Node0311-leaf , Node0312-leaf , Node0313-leaf , Node0341-leaf , Node0342 .

The object with results only for a single top-value method and a single partitioning method can be extracted as:

res = res_rh["022"]

A summary of res and all the functions that can be applied to it:

res
#> A 'ConsensusPartition' object with k = 2, 3, 4.
#>   On a matrix with 12456 rows and 127 columns.
#>   Top rows (1246) are extracted by 'ATC' method.
#>   Subgroups are detected by 'skmeans' method.
#>   Performed in total 150 partitions by row resampling.
#>   Best k for subgroups seems to be 3.
#> 
#> Following methods can be applied to this 'ConsensusPartition' object:
#>  [1] "cola_report"             "collect_classes"         "collect_plots"          
#>  [4] "collect_stats"           "colnames"                "compare_partitions"     
#>  [7] "compare_signatures"      "consensus_heatmap"       "dimension_reduction"    
#> [10] "functional_enrichment"   "get_anno_col"            "get_anno"               
#> [13] "get_classes"             "get_consensus"           "get_matrix"             
#> [16] "get_membership"          "get_param"               "get_signatures"         
#> [19] "get_stats"               "is_best_k"               "is_stable_k"            
#> [22] "membership_heatmap"      "ncol"                    "nrow"                   
#> [25] "plot_ecdf"               "predict_classes"         "rownames"               
#> [28] "select_partition_number" "show"                    "suggest_best_k"         
#> [31] "test_to_known_factors"   "top_rows_heatmap"

collect_plots() function collects all the plots made from res for all k (number of subgroups) into one single page to provide an easy and fast comparison between different k.

collect_plots(res)

plot of chunk node-022-collect-plots

The plots are:

All the plots in panels can be made by individual functions and they are plotted later in this section.

select_partition_number() produces several plots showing different statistics for choosing “optimized” k. There are following statistics:

The detailed explanations of these statistics can be found in the cola vignette.

Generally speaking, higher 1-PAC score, higher mean silhouette score or higher concordance corresponds to better partition. Rand index and Jaccard index measure how similar the current partition is compared to partition with k-1. If they are too similar, we won't accept k is better than k-1.

select_partition_number(res)

plot of chunk node-022-select-partition-number

The numeric values for all these statistics can be obtained by get_stats().

get_stats(res)
#>   k 1-PAC mean_silhouette concordance area_increased  Rand Jaccard
#> 2 2 1.000           0.998       0.999         0.4624 0.539   0.539
#> 3 3 1.000           0.990       0.992         0.1154 0.943   0.894
#> 4 4 0.989           0.971       0.993         0.0432 0.976   0.950

suggest_best_k() suggests the best \(k\) based on these statistics. The rules are as follows:

suggest_best_k(res)
#> [1] 3
#> attr(,"optional")
#> [1] 2

There is also optional best \(k\) = 2 that is worth to check.

Following is the table of the partitions (You need to click the show/hide code output link to see it). The membership matrix (columns with name p*) is inferred by clue::cl_consensus() function with the SE method. Basically the value in the membership matrix represents the probability to belong to a certain group. The finall subgroup label for an item is determined with the group with highest probability it belongs to.

In get_classes() function, the entropy is calculated from the membership matrix and the silhouette score is calculated from the consensus matrix.

show/hide code output

cbind(get_classes(res, k = 2), get_membership(res, k = 2))
#>                                             class entropy silhouette   p1   p2
#> lane1_3600STDY6077864_ATCACGTT_L001_15986_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6077865_CGATGTTT_L001_15986_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6077883_TTGGAGGT_L001_15986_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6077899_TGAACTGG_L001_15986_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6077904_TCCAGTCG_L001_15986_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6077911_TTCAGCTC_L001_15986_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6077914_TTACTCGC_L001_15986_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6077933_GATCTCTT_L001_15986_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6077934_GTGTCCTT_L001_15986_1     1   0.000      0.998 1.00 0.00
#> lane3_3600STDY6077960_ATCACGTT_L003_15987_1     1   0.000      0.998 1.00 0.00
#> lane3_3600STDY6077961_CGATGTTT_L003_15987_1     1   0.000      0.998 1.00 0.00
#> lane3_3600STDY6077978_TCTGCTGT_L003_15987_1     1   0.000      0.998 1.00 0.00
#> lane3_3600STDY6077997_TCTCACGG_L003_15987_1     1   0.584      0.837 0.86 0.14
#> lane3_3600STDY6078001_TGTATGCG_L003_15987_1     1   0.000      0.998 1.00 0.00
#> lane3_3600STDY6078027_TGCGTGAA_L003_15987_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6167697_ACAGTGGT_L001_17236_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6167700_ACTTGATG_L001_17236_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6167706_TCTCGGTT_L001_17236_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6167707_TAAGCGTT_L001_17236_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6167710_TTCTGTGT_L001_17236_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6167718_TTCCTGCT_L001_17236_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6167724_TTCCATTG_L001_17236_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6167734_TGTATGCG_L001_17236_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6167758_TGAAGCCA_L001_17236_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6167776_GTAAGGTG_L001_17236_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6167778_GTTGTCGG_L001_17236_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6167788_GTCTTGGC_L001_17236_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6167810_CGCTTCCT_L001_17236_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6167813_CCTAGTAT_L001_17236_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6167844_ACCTCTGG_L001_17236_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6167847_AGGTCACG_L001_17236_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6167857_AATCCTGA_L001_17236_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6167858_AGGATTCA_L001_17236_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6167861_CGGAAACA_L001_17236_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6167870_GCTGTGAA_L001_17236_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6167871_ACCTTCAA_L001_17236_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6167872_ACAAAGCC_L001_17236_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6167873_CAAAACCG_L001_17236_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6167879_ACCCAACA_L001_17236_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6167883_TATTGGAG_L001_17236_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6167884_TAAACATA_L001_17236_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6167908_TAGTCGGT_L001_17236_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6167918_GCGCTGAT_L001_17236_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6167920_GAGGGCAG_L001_17236_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6167950_TAGCGAGA_L001_17236_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6167965_GGTAAGAG_L001_17236_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6167989_AGGATCTC_L001_17236_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6168016_CCTACCCG_L001_17236_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6168018_TATACATC_L001_17236_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6168023_GCTGGTTG_L001_17236_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6168040_AAACCCGT_L001_17236_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6168063_GTACGGAC_L001_17236_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6168064_CATTTTGC_L001_17236_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6168069_CTGCCTAG_L001_17236_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6168075_TGGTTGAC_L001_17236_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6168076_ACCTGCTG_L001_17236_1     1   0.000      0.998 1.00 0.00
#> lane4_3600STDY6184213_TCGAAGTG_L004_17480_1     1   0.000      0.998 1.00 0.00
#> lane4_3600STDY6184216_TGAACTGG_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184247_TACCACCA_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184260_GTCGCTAT_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184271_GACCTTAG_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184282_GGCACAAC_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184294_CGTTCGGT_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184309_CACTCGAG_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184312_CATAGGTC_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184319_CCATGCAC_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184324_CCTGAGCA_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184342_AGAGGACC_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184346_AGGATTCA_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184347_AACTGGCA_L004_17480_1     1   0.000      0.998 1.00 0.00
#> lane4_3600STDY6184348_ACAACGCA_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184352_TCTCAGTG_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184357_GCTATGAC_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184358_GCTGTGAA_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184359_ACCTTCAA_L004_17480_1     1   0.000      0.998 1.00 0.00
#> lane4_3600STDY6184360_ACAAAGCC_L004_17480_1     1   0.000      0.998 1.00 0.00
#> lane4_3600STDY6184367_ACCCAACA_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184371_TATTGGAG_L004_17480_1     1   0.000      0.998 1.00 0.00
#> lane4_3600STDY6184372_TAAACATA_L004_17480_1     1   0.000      0.998 1.00 0.00
#> lane4_3600STDY6184373_GTAAGATA_L004_17480_1     1   0.000      0.998 1.00 0.00
#> lane4_3600STDY6184390_CGCCTTTG_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184391_TAAGGTCA_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184414_GAGGTCGC_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184433_CGCCAGTA_L004_17480_1     1   0.000      0.998 1.00 0.00
#> lane4_3600STDY6184438_TAGCGAGA_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184447_AATTTGCG_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184456_TGAGACTC_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184460_CCGCATGA_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184461_AAGTAACA_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184462_GTGGTACT_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184463_AGCTGTGC_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184464_TTACCTTC_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184486_CAGGCTCT_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184487_AAAGCACG_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184498_CGCCTGAT_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184504_CCTACCCG_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184508_GAAGCGCA_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184509_ACCTCTAC_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184535_AGGGATTC_L004_17480_1     1   0.000      0.998 1.00 0.00
#> lane4_3600STDY6184548_GTTCCGCA_L004_17480_1     1   0.000      0.998 1.00 0.00
#> lane4_3600STDY6184551_GTACGGAC_L004_17480_1     1   0.000      0.998 1.00 0.00
#> lane4_3600STDY6184552_CATTTTGC_L004_17480_1     1   0.000      0.998 1.00 0.00
#> lane4_3600STDY6184558_GAGCGCAT_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184562_CAAGGAGC_L004_17480_1     1   0.000      0.998 1.00 0.00
#> lane4_3600STDY6184563_TGGTTGAC_L004_17480_1     1   0.000      0.998 1.00 0.00
#> lane4_3600STDY6184564_ACCTGCTG_L004_17480_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183797_ATCACGTT_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183808_CTTGTACT_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183810_TCTCGGTT_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183816_TTGGAGGT_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183820_TTGACTCT_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183886_GCAATCCG_L001_17592_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6183952_ACTGTTAG_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183964_ACAACGCA_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183965_CGGAAACA_L001_17592_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6183988_TAAACATA_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183989_GTAAGATA_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184001_GTCAAGCT_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184011_ACTTCGTA_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184023_TGCTGAAC_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184067_GATCGAAC_L001_17592_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6184068_GTATAGGG_L001_17592_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6184079_AGCTGTGC_L001_17592_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6184105_GGACATAT_L001_17592_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6184132_CGAATCGA_L001_17592_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6184156_TAATCAAC_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184180_ACCTGCTG_L001_17592_1     1   0.000      0.998 1.00 0.00

show/hide code output

cbind(get_classes(res, k = 3), get_membership(res, k = 3))
#>                                             class entropy silhouette   p1   p2   p3
#> lane1_3600STDY6077864_ATCACGTT_L001_15986_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6077865_CGATGTTT_L001_15986_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6077883_TTGGAGGT_L001_15986_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6077899_TGAACTGG_L001_15986_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6077904_TCCAGTCG_L001_15986_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6077911_TTCAGCTC_L001_15986_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6077914_TTACTCGC_L001_15986_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6077933_GATCTCTT_L001_15986_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6077934_GTGTCCTT_L001_15986_1     1   0.000      0.996 1.00 0.00 0.00
#> lane3_3600STDY6077960_ATCACGTT_L003_15987_1     1   0.000      0.996 1.00 0.00 0.00
#> lane3_3600STDY6077961_CGATGTTT_L003_15987_1     1   0.000      0.996 1.00 0.00 0.00
#> lane3_3600STDY6077978_TCTGCTGT_L003_15987_1     1   0.334      0.851 0.88 0.00 0.12
#> lane3_3600STDY6077997_TCTCACGG_L003_15987_1     1   0.516      0.761 0.82 0.04 0.14
#> lane3_3600STDY6078001_TGTATGCG_L003_15987_1     1   0.000      0.996 1.00 0.00 0.00
#> lane3_3600STDY6078027_TGCGTGAA_L003_15987_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6167697_ACAGTGGT_L001_17236_1     2   0.207      0.940 0.00 0.94 0.06
#> lane1_3600STDY6167700_ACTTGATG_L001_17236_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6167706_TCTCGGTT_L001_17236_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6167707_TAAGCGTT_L001_17236_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6167710_TTCTGTGT_L001_17236_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6167718_TTCCTGCT_L001_17236_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6167724_TTCCATTG_L001_17236_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6167734_TGTATGCG_L001_17236_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6167758_TGAAGCCA_L001_17236_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6167776_GTAAGGTG_L001_17236_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6167778_GTTGTCGG_L001_17236_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6167788_GTCTTGGC_L001_17236_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6167810_CGCTTCCT_L001_17236_1     2   0.000      0.999 0.00 1.00 0.00
#> lane1_3600STDY6167813_CCTAGTAT_L001_17236_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6167844_ACCTCTGG_L001_17236_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6167847_AGGTCACG_L001_17236_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6167857_AATCCTGA_L001_17236_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6167858_AGGATTCA_L001_17236_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6167861_CGGAAACA_L001_17236_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6167870_GCTGTGAA_L001_17236_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6167871_ACCTTCAA_L001_17236_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6167872_ACAAAGCC_L001_17236_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6167873_CAAAACCG_L001_17236_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6167879_ACCCAACA_L001_17236_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6167883_TATTGGAG_L001_17236_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6167884_TAAACATA_L001_17236_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6167908_TAGTCGGT_L001_17236_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6167918_GCGCTGAT_L001_17236_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6167920_GAGGGCAG_L001_17236_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6167950_TAGCGAGA_L001_17236_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6167965_GGTAAGAG_L001_17236_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6167989_AGGATCTC_L001_17236_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6168016_CCTACCCG_L001_17236_1     2   0.000      0.999 0.00 1.00 0.00
#> lane1_3600STDY6168018_TATACATC_L001_17236_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6168023_GCTGGTTG_L001_17236_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6168040_AAACCCGT_L001_17236_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6168063_GTACGGAC_L001_17236_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6168064_CATTTTGC_L001_17236_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6168069_CTGCCTAG_L001_17236_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6168075_TGGTTGAC_L001_17236_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6168076_ACCTGCTG_L001_17236_1     1   0.000      0.996 1.00 0.00 0.00
#> lane4_3600STDY6184213_TCGAAGTG_L004_17480_1     1   0.000      0.996 1.00 0.00 0.00
#> lane4_3600STDY6184216_TGAACTGG_L004_17480_1     2   0.000      0.999 0.00 1.00 0.00
#> lane4_3600STDY6184247_TACCACCA_L004_17480_1     2   0.000      0.999 0.00 1.00 0.00
#> lane4_3600STDY6184260_GTCGCTAT_L004_17480_1     2   0.000      0.999 0.00 1.00 0.00
#> lane4_3600STDY6184271_GACCTTAG_L004_17480_1     2   0.000      0.999 0.00 1.00 0.00
#> lane4_3600STDY6184282_GGCACAAC_L004_17480_1     2   0.000      0.999 0.00 1.00 0.00
#> lane4_3600STDY6184294_CGTTCGGT_L004_17480_1     2   0.000      0.999 0.00 1.00 0.00
#> lane4_3600STDY6184309_CACTCGAG_L004_17480_1     2   0.000      0.999 0.00 1.00 0.00
#> lane4_3600STDY6184312_CATAGGTC_L004_17480_1     2   0.000      0.999 0.00 1.00 0.00
#> lane4_3600STDY6184319_CCATGCAC_L004_17480_1     2   0.000      0.999 0.00 1.00 0.00
#> lane4_3600STDY6184324_CCTGAGCA_L004_17480_1     2   0.000      0.999 0.00 1.00 0.00
#> lane4_3600STDY6184342_AGAGGACC_L004_17480_1     2   0.000      0.999 0.00 1.00 0.00
#> lane4_3600STDY6184346_AGGATTCA_L004_17480_1     2   0.000      0.999 0.00 1.00 0.00
#> lane4_3600STDY6184347_AACTGGCA_L004_17480_1     1   0.000      0.996 1.00 0.00 0.00
#> lane4_3600STDY6184348_ACAACGCA_L004_17480_1     2   0.000      0.999 0.00 1.00 0.00
#> lane4_3600STDY6184352_TCTCAGTG_L004_17480_1     2   0.000      0.999 0.00 1.00 0.00
#> lane4_3600STDY6184357_GCTATGAC_L004_17480_1     2   0.000      0.999 0.00 1.00 0.00
#> lane4_3600STDY6184358_GCTGTGAA_L004_17480_1     2   0.000      0.999 0.00 1.00 0.00
#> lane4_3600STDY6184359_ACCTTCAA_L004_17480_1     3   0.455      0.862 0.20 0.00 0.80
#> lane4_3600STDY6184360_ACAAAGCC_L004_17480_1     1   0.000      0.996 1.00 0.00 0.00
#> lane4_3600STDY6184367_ACCCAACA_L004_17480_1     2   0.000      0.999 0.00 1.00 0.00
#> lane4_3600STDY6184371_TATTGGAG_L004_17480_1     1   0.000      0.996 1.00 0.00 0.00
#> lane4_3600STDY6184372_TAAACATA_L004_17480_1     1   0.000      0.996 1.00 0.00 0.00
#> lane4_3600STDY6184373_GTAAGATA_L004_17480_1     3   0.207      0.930 0.06 0.00 0.94
#> lane4_3600STDY6184390_CGCCTTTG_L004_17480_1     2   0.000      0.999 0.00 1.00 0.00
#> lane4_3600STDY6184391_TAAGGTCA_L004_17480_1     2   0.000      0.999 0.00 1.00 0.00
#> lane4_3600STDY6184414_GAGGTCGC_L004_17480_1     2   0.000      0.999 0.00 1.00 0.00
#> lane4_3600STDY6184433_CGCCAGTA_L004_17480_1     3   0.334      0.929 0.12 0.00 0.88
#> lane4_3600STDY6184438_TAGCGAGA_L004_17480_1     2   0.000      0.999 0.00 1.00 0.00
#> lane4_3600STDY6184447_AATTTGCG_L004_17480_1     2   0.000      0.999 0.00 1.00 0.00
#> lane4_3600STDY6184456_TGAGACTC_L004_17480_1     2   0.000      0.999 0.00 1.00 0.00
#> lane4_3600STDY6184460_CCGCATGA_L004_17480_1     2   0.000      0.999 0.00 1.00 0.00
#> lane4_3600STDY6184461_AAGTAACA_L004_17480_1     2   0.000      0.999 0.00 1.00 0.00
#> lane4_3600STDY6184462_GTGGTACT_L004_17480_1     2   0.000      0.999 0.00 1.00 0.00
#> lane4_3600STDY6184463_AGCTGTGC_L004_17480_1     2   0.000      0.999 0.00 1.00 0.00
#> lane4_3600STDY6184464_TTACCTTC_L004_17480_1     2   0.000      0.999 0.00 1.00 0.00
#> lane4_3600STDY6184486_CAGGCTCT_L004_17480_1     2   0.000      0.999 0.00 1.00 0.00
#> lane4_3600STDY6184487_AAAGCACG_L004_17480_1     2   0.000      0.999 0.00 1.00 0.00
#> lane4_3600STDY6184498_CGCCTGAT_L004_17480_1     2   0.000      0.999 0.00 1.00 0.00
#> lane4_3600STDY6184504_CCTACCCG_L004_17480_1     2   0.000      0.999 0.00 1.00 0.00
#> lane4_3600STDY6184508_GAAGCGCA_L004_17480_1     2   0.000      0.999 0.00 1.00 0.00
#> lane4_3600STDY6184509_ACCTCTAC_L004_17480_1     2   0.000      0.999 0.00 1.00 0.00
#> lane4_3600STDY6184535_AGGGATTC_L004_17480_1     1   0.000      0.996 1.00 0.00 0.00
#> lane4_3600STDY6184548_GTTCCGCA_L004_17480_1     1   0.000      0.996 1.00 0.00 0.00
#> lane4_3600STDY6184551_GTACGGAC_L004_17480_1     1   0.000      0.996 1.00 0.00 0.00
#> lane4_3600STDY6184552_CATTTTGC_L004_17480_1     1   0.000      0.996 1.00 0.00 0.00
#> lane4_3600STDY6184558_GAGCGCAT_L004_17480_1     2   0.000      0.999 0.00 1.00 0.00
#> lane4_3600STDY6184562_CAAGGAGC_L004_17480_1     1   0.000      0.996 1.00 0.00 0.00
#> lane4_3600STDY6184563_TGGTTGAC_L004_17480_1     1   0.000      0.996 1.00 0.00 0.00
#> lane4_3600STDY6184564_ACCTGCTG_L004_17480_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6183797_ATCACGTT_L001_17592_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6183808_CTTGTACT_L001_17592_1     3   0.369      0.920 0.14 0.00 0.86
#> lane1_3600STDY6183810_TCTCGGTT_L001_17592_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6183816_TTGGAGGT_L001_17592_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6183820_TTGACTCT_L001_17592_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6183886_GCAATCCG_L001_17592_1     2   0.000      0.999 0.00 1.00 0.00
#> lane1_3600STDY6183952_ACTGTTAG_L001_17592_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6183964_ACAACGCA_L001_17592_1     3   0.207      0.930 0.06 0.00 0.94
#> lane1_3600STDY6183965_CGGAAACA_L001_17592_1     2   0.000      0.999 0.00 1.00 0.00
#> lane1_3600STDY6183988_TAAACATA_L001_17592_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6183989_GTAAGATA_L001_17592_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6184001_GTCAAGCT_L001_17592_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6184011_ACTTCGTA_L001_17592_1     3   0.207      0.930 0.06 0.00 0.94
#> lane1_3600STDY6184023_TGCTGAAC_L001_17592_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6184067_GATCGAAC_L001_17592_1     2   0.000      0.999 0.00 1.00 0.00
#> lane1_3600STDY6184068_GTATAGGG_L001_17592_1     2   0.000      0.999 0.00 1.00 0.00
#> lane1_3600STDY6184079_AGCTGTGC_L001_17592_1     2   0.000      0.999 0.00 1.00 0.00
#> lane1_3600STDY6184105_GGACATAT_L001_17592_1     2   0.000      0.999 0.00 1.00 0.00
#> lane1_3600STDY6184132_CGAATCGA_L001_17592_1     2   0.000      0.999 0.00 1.00 0.00
#> lane1_3600STDY6184156_TAATCAAC_L001_17592_1     1   0.000      0.996 1.00 0.00 0.00
#> lane1_3600STDY6184180_ACCTGCTG_L001_17592_1     1   0.000      0.996 1.00 0.00 0.00

show/hide code output

cbind(get_classes(res, k = 4), get_membership(res, k = 4))
#>                                             class entropy silhouette   p1   p2   p3   p4
#> lane1_3600STDY6077864_ATCACGTT_L001_15986_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077865_CGATGTTT_L001_15986_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077883_TTGGAGGT_L001_15986_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077899_TGAACTGG_L001_15986_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077904_TCCAGTCG_L001_15986_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077911_TTCAGCTC_L001_15986_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077914_TTACTCGC_L001_15986_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077933_GATCTCTT_L001_15986_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6077934_GTGTCCTT_L001_15986_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane3_3600STDY6077960_ATCACGTT_L003_15987_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane3_3600STDY6077961_CGATGTTT_L003_15987_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane3_3600STDY6077978_TCTGCTGT_L003_15987_1     4  0.0000      0.720 0.00 0.00 0.00 1.00
#> lane3_3600STDY6077997_TCTCACGG_L003_15987_1     4  0.0000      0.720 0.00 0.00 0.00 1.00
#> lane3_3600STDY6078001_TGTATGCG_L003_15987_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane3_3600STDY6078027_TGCGTGAA_L003_15987_1     1  0.2647      0.854 0.88 0.00 0.00 0.12
#> lane1_3600STDY6167697_ACAGTGGT_L001_17236_1     4  0.3975      0.500 0.00 0.24 0.00 0.76
#> lane1_3600STDY6167700_ACTTGATG_L001_17236_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167706_TCTCGGTT_L001_17236_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167707_TAAGCGTT_L001_17236_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167710_TTCTGTGT_L001_17236_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167718_TTCCTGCT_L001_17236_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167724_TTCCATTG_L001_17236_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167734_TGTATGCG_L001_17236_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167758_TGAAGCCA_L001_17236_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167776_GTAAGGTG_L001_17236_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167778_GTTGTCGG_L001_17236_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167788_GTCTTGGC_L001_17236_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167810_CGCTTCCT_L001_17236_1     2  0.0707      0.978 0.00 0.98 0.00 0.02
#> lane1_3600STDY6167813_CCTAGTAT_L001_17236_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167844_ACCTCTGG_L001_17236_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167847_AGGTCACG_L001_17236_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167857_AATCCTGA_L001_17236_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167858_AGGATTCA_L001_17236_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167861_CGGAAACA_L001_17236_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167870_GCTGTGAA_L001_17236_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167871_ACCTTCAA_L001_17236_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167872_ACAAAGCC_L001_17236_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167873_CAAAACCG_L001_17236_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167879_ACCCAACA_L001_17236_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167883_TATTGGAG_L001_17236_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167884_TAAACATA_L001_17236_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167908_TAGTCGGT_L001_17236_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167918_GCGCTGAT_L001_17236_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167920_GAGGGCAG_L001_17236_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167950_TAGCGAGA_L001_17236_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167965_GGTAAGAG_L001_17236_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167989_AGGATCTC_L001_17236_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168016_CCTACCCG_L001_17236_1     2  0.0000      0.999 0.00 1.00 0.00 0.00
#> lane1_3600STDY6168018_TATACATC_L001_17236_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168023_GCTGGTTG_L001_17236_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168040_AAACCCGT_L001_17236_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168063_GTACGGAC_L001_17236_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168064_CATTTTGC_L001_17236_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168069_CTGCCTAG_L001_17236_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168075_TGGTTGAC_L001_17236_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6168076_ACCTGCTG_L001_17236_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184213_TCGAAGTG_L004_17480_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184216_TGAACTGG_L004_17480_1     2  0.0000      0.999 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184247_TACCACCA_L004_17480_1     2  0.0000      0.999 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184260_GTCGCTAT_L004_17480_1     2  0.0000      0.999 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184271_GACCTTAG_L004_17480_1     2  0.0000      0.999 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184282_GGCACAAC_L004_17480_1     2  0.0000      0.999 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184294_CGTTCGGT_L004_17480_1     2  0.0000      0.999 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184309_CACTCGAG_L004_17480_1     2  0.0000      0.999 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184312_CATAGGTC_L004_17480_1     2  0.0000      0.999 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184319_CCATGCAC_L004_17480_1     2  0.0000      0.999 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184324_CCTGAGCA_L004_17480_1     2  0.0000      0.999 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184342_AGAGGACC_L004_17480_1     2  0.0000      0.999 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184346_AGGATTCA_L004_17480_1     2  0.0000      0.999 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184347_AACTGGCA_L004_17480_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184348_ACAACGCA_L004_17480_1     2  0.0000      0.999 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184352_TCTCAGTG_L004_17480_1     2  0.0000      0.999 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184357_GCTATGAC_L004_17480_1     2  0.0000      0.999 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184358_GCTGTGAA_L004_17480_1     2  0.0000      0.999 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184359_ACCTTCAA_L004_17480_1     3  0.4624      0.296 0.34 0.00 0.66 0.00
#> lane4_3600STDY6184360_ACAAAGCC_L004_17480_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184367_ACCCAACA_L004_17480_1     2  0.0000      0.999 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184371_TATTGGAG_L004_17480_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184372_TAAACATA_L004_17480_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184373_GTAAGATA_L004_17480_1     3  0.0000      0.692 0.00 0.00 1.00 0.00
#> lane4_3600STDY6184390_CGCCTTTG_L004_17480_1     2  0.0000      0.999 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184391_TAAGGTCA_L004_17480_1     2  0.0000      0.999 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184414_GAGGTCGC_L004_17480_1     2  0.0000      0.999 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184433_CGCCAGTA_L004_17480_1     3  0.3335      0.599 0.12 0.00 0.86 0.02
#> lane4_3600STDY6184438_TAGCGAGA_L004_17480_1     2  0.0000      0.999 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184447_AATTTGCG_L004_17480_1     2  0.0000      0.999 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184456_TGAGACTC_L004_17480_1     2  0.0000      0.999 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184460_CCGCATGA_L004_17480_1     2  0.0000      0.999 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184461_AAGTAACA_L004_17480_1     2  0.0000      0.999 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184462_GTGGTACT_L004_17480_1     2  0.0000      0.999 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184463_AGCTGTGC_L004_17480_1     2  0.0000      0.999 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184464_TTACCTTC_L004_17480_1     2  0.0000      0.999 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184486_CAGGCTCT_L004_17480_1     2  0.0000      0.999 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184487_AAAGCACG_L004_17480_1     2  0.0000      0.999 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184498_CGCCTGAT_L004_17480_1     2  0.0000      0.999 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184504_CCTACCCG_L004_17480_1     2  0.0000      0.999 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184508_GAAGCGCA_L004_17480_1     2  0.0000      0.999 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184509_ACCTCTAC_L004_17480_1     2  0.0000      0.999 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184535_AGGGATTC_L004_17480_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184548_GTTCCGCA_L004_17480_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184551_GTACGGAC_L004_17480_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184552_CATTTTGC_L004_17480_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184558_GAGCGCAT_L004_17480_1     2  0.0000      0.999 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184562_CAAGGAGC_L004_17480_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184563_TGGTTGAC_L004_17480_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184564_ACCTGCTG_L004_17480_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183797_ATCACGTT_L001_17592_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183808_CTTGTACT_L001_17592_1     3  0.1211      0.689 0.04 0.00 0.96 0.00
#> lane1_3600STDY6183810_TCTCGGTT_L001_17592_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183816_TTGGAGGT_L001_17592_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183820_TTGACTCT_L001_17592_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183886_GCAATCCG_L001_17592_1     2  0.0000      0.999 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183952_ACTGTTAG_L001_17592_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183964_ACAACGCA_L001_17592_1     3  0.0000      0.692 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183965_CGGAAACA_L001_17592_1     2  0.0000      0.999 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183988_TAAACATA_L001_17592_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183989_GTAAGATA_L001_17592_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184001_GTCAAGCT_L001_17592_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184011_ACTTCGTA_L001_17592_1     3  0.0000      0.692 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184023_TGCTGAAC_L001_17592_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184067_GATCGAAC_L001_17592_1     2  0.0000      0.999 0.00 1.00 0.00 0.00
#> lane1_3600STDY6184068_GTATAGGG_L001_17592_1     2  0.0000      0.999 0.00 1.00 0.00 0.00
#> lane1_3600STDY6184079_AGCTGTGC_L001_17592_1     2  0.0000      0.999 0.00 1.00 0.00 0.00
#> lane1_3600STDY6184105_GGACATAT_L001_17592_1     2  0.0000      0.999 0.00 1.00 0.00 0.00
#> lane1_3600STDY6184132_CGAATCGA_L001_17592_1     2  0.0000      0.999 0.00 1.00 0.00 0.00
#> lane1_3600STDY6184156_TAATCAAC_L001_17592_1     1  0.0000      0.998 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184180_ACCTGCTG_L001_17592_1     1  0.0000      0.998 1.00 0.00 0.00 0.00

Heatmaps for the consensus matrix. It visualizes the probability of two samples to be in a same group.

consensus_heatmap(res, k = 2)

plot of chunk tab-node-022-consensus-heatmap-1

consensus_heatmap(res, k = 3)

plot of chunk tab-node-022-consensus-heatmap-2

consensus_heatmap(res, k = 4)

plot of chunk tab-node-022-consensus-heatmap-3

Heatmaps for the membership of samples in all partitions to see how consistent they are:

membership_heatmap(res, k = 2)

plot of chunk tab-node-022-membership-heatmap-1

membership_heatmap(res, k = 3)

plot of chunk tab-node-022-membership-heatmap-2

membership_heatmap(res, k = 4)

plot of chunk tab-node-022-membership-heatmap-3

As soon as the classes for columns are determined, the signatures that are significantly different between subgroups can be looked for. Following are the heatmaps for signatures.

Signature heatmaps where rows are scaled:

get_signatures(res, k = 2)

plot of chunk tab-node-022-get-signatures-1

get_signatures(res, k = 3)

plot of chunk tab-node-022-get-signatures-2

get_signatures(res, k = 4)

plot of chunk tab-node-022-get-signatures-3

Signature heatmaps where rows are not scaled:

get_signatures(res, k = 2, scale_rows = FALSE)

plot of chunk tab-node-022-get-signatures-no-scale-1

get_signatures(res, k = 3, scale_rows = FALSE)

plot of chunk tab-node-022-get-signatures-no-scale-2

get_signatures(res, k = 4, scale_rows = FALSE)

plot of chunk tab-node-022-get-signatures-no-scale-3

Compare the overlap of signatures from different k:

compare_signatures(res)

plot of chunk node-022-signature_compare

get_signature() returns a data frame invisibly. To get the list of signatures, the function call should be assigned to a variable explicitly. In following code, if plot argument is set to FALSE, no heatmap is plotted while only the differential analysis is performed.

# code only for demonstration
tb = get_signature(res, k = ..., plot = FALSE)

An example of the output of tb is:

#>   which_row         fdr    mean_1    mean_2 scaled_mean_1 scaled_mean_2 km
#> 1        38 0.042760348  8.373488  9.131774    -0.5533452     0.5164555  1
#> 2        40 0.018707592  7.106213  8.469186    -0.6173731     0.5762149  1
#> 3        55 0.019134737 10.221463 11.207825    -0.6159697     0.5749050  1
#> 4        59 0.006059896  5.921854  7.869574    -0.6899429     0.6439467  1
#> 5        60 0.018055526  8.928898 10.211722    -0.6204761     0.5791110  1
#> 6        98 0.009384629 15.714769 14.887706     0.6635654    -0.6193277  2
...

The columns in tb are:

  1. which_row: row indices corresponding to the input matrix.
  2. fdr: FDR for the differential test.
  3. mean_x: The mean value in group x.
  4. scaled_mean_x: The mean value in group x after rows are scaled.
  5. km: Row groups if k-means clustering is applied to rows (which is done by automatically selecting number of clusters).

If there are too many signatures, top_signatures = ... can be set to only show the signatures with the highest FDRs:

# code only for demonstration
# e.g. to show the top 500 most significant rows
tb = get_signature(res, k = ..., top_signatures = 500)

If the signatures are defined as these which are uniquely high in current group, diff_method argument can be set to "uniquely_high_in_one_group":

# code only for demonstration
tb = get_signature(res, k = ..., diff_method = "uniquely_high_in_one_group")

UMAP plot which shows how samples are separated.

dimension_reduction(res, k = 2, method = "UMAP")

plot of chunk tab-node-022-dimension-reduction-1

dimension_reduction(res, k = 3, method = "UMAP")

plot of chunk tab-node-022-dimension-reduction-2

dimension_reduction(res, k = 4, method = "UMAP")

plot of chunk tab-node-022-dimension-reduction-3

Following heatmap shows how subgroups are split when increasing k:

collect_classes(res)

plot of chunk node-022-collect-classes

Test correlation between subgroups and known annotations. If the known annotation is numeric, one-way ANOVA test is applied, and if the known annotation is discrete, chi-squared contingency table test is applied.

test_to_known_factors(res)
#>             n_sample phenotype(p-value) k
#> ATC:skmeans      127           6.73e-08 2
#> ATC:skmeans      127           1.92e-09 3
#> ATC:skmeans      125           9.08e-10 4

If matrix rows can be associated to genes, consider to use functional_enrichment(res, ...) to perform function enrichment for the signature genes. See this vignette for more detailed explanations.


Node0222

Parent node: Node022. Child nodes: Node01211-leaf , Node01212-leaf , Node01231-leaf , Node01232-leaf , Node01233-leaf , Node02221-leaf , Node02222-leaf , Node03421-leaf , Node03422-leaf , Node03423-leaf .

The object with results only for a single top-value method and a single partitioning method can be extracted as:

res = res_rh["0222"]

A summary of res and all the functions that can be applied to it:

res
#> A 'ConsensusPartition' object with k = 2, 3, 4.
#>   On a matrix with 11644 rows and 44 columns.
#>   Top rows (1162) are extracted by 'ATC' method.
#>   Subgroups are detected by 'skmeans' method.
#>   Performed in total 150 partitions by row resampling.
#>   Best k for subgroups seems to be 3.
#> 
#> Following methods can be applied to this 'ConsensusPartition' object:
#>  [1] "cola_report"             "collect_classes"         "collect_plots"          
#>  [4] "collect_stats"           "colnames"                "compare_partitions"     
#>  [7] "compare_signatures"      "consensus_heatmap"       "dimension_reduction"    
#> [10] "functional_enrichment"   "get_anno_col"            "get_anno"               
#> [13] "get_classes"             "get_consensus"           "get_matrix"             
#> [16] "get_membership"          "get_param"               "get_signatures"         
#> [19] "get_stats"               "is_best_k"               "is_stable_k"            
#> [22] "membership_heatmap"      "ncol"                    "nrow"                   
#> [25] "plot_ecdf"               "predict_classes"         "rownames"               
#> [28] "select_partition_number" "show"                    "suggest_best_k"         
#> [31] "test_to_known_factors"   "top_rows_heatmap"

collect_plots() function collects all the plots made from res for all k (number of subgroups) into one single page to provide an easy and fast comparison between different k.

collect_plots(res)

plot of chunk node-0222-collect-plots

The plots are:

All the plots in panels can be made by individual functions and they are plotted later in this section.

select_partition_number() produces several plots showing different statistics for choosing “optimized” k. There are following statistics:

The detailed explanations of these statistics can be found in the cola vignette.

Generally speaking, higher 1-PAC score, higher mean silhouette score or higher concordance corresponds to better partition. Rand index and Jaccard index measure how similar the current partition is compared to partition with k-1. If they are too similar, we won't accept k is better than k-1.

select_partition_number(res)

plot of chunk node-0222-select-partition-number

The numeric values for all these statistics can be obtained by get_stats().

get_stats(res)
#>   k 1-PAC mean_silhouette concordance area_increased  Rand Jaccard
#> 2 2  1.00           0.974       0.990          0.505 0.498   0.498
#> 3 3  1.00           0.901       0.961          0.273 0.812   0.640
#> 4 4  0.84           0.867       0.930          0.132 0.909   0.751

suggest_best_k() suggests the best \(k\) based on these statistics. The rules are as follows:

suggest_best_k(res)
#> [1] 3
#> attr(,"optional")
#> [1] 2

There is also optional best \(k\) = 2 that is worth to check.

Following is the table of the partitions (You need to click the show/hide code output link to see it). The membership matrix (columns with name p*) is inferred by clue::cl_consensus() function with the SE method. Basically the value in the membership matrix represents the probability to belong to a certain group. The finall subgroup label for an item is determined with the group with highest probability it belongs to.

In get_classes() function, the entropy is calculated from the membership matrix and the silhouette score is calculated from the consensus matrix.

show/hide code output

cbind(get_classes(res, k = 2), get_membership(res, k = 2))
#>                                             class entropy silhouette   p1   p2
#> lane1_3600STDY6167810_CGCTTCCT_L001_17236_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6168016_CCTACCCG_L001_17236_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184216_TGAACTGG_L004_17480_1     1   0.000      0.982 1.00 0.00
#> lane4_3600STDY6184247_TACCACCA_L004_17480_1     1   0.000      0.982 1.00 0.00
#> lane4_3600STDY6184260_GTCGCTAT_L004_17480_1     1   0.000      0.982 1.00 0.00
#> lane4_3600STDY6184271_GACCTTAG_L004_17480_1     1   0.000      0.982 1.00 0.00
#> lane4_3600STDY6184282_GGCACAAC_L004_17480_1     1   0.000      0.982 1.00 0.00
#> lane4_3600STDY6184294_CGTTCGGT_L004_17480_1     1   0.000      0.982 1.00 0.00
#> lane4_3600STDY6184309_CACTCGAG_L004_17480_1     1   0.000      0.982 1.00 0.00
#> lane4_3600STDY6184312_CATAGGTC_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184319_CCATGCAC_L004_17480_1     1   0.000      0.982 1.00 0.00
#> lane4_3600STDY6184324_CCTGAGCA_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184342_AGAGGACC_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184346_AGGATTCA_L004_17480_1     1   0.000      0.982 1.00 0.00
#> lane4_3600STDY6184348_ACAACGCA_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184352_TCTCAGTG_L004_17480_1     1   0.000      0.982 1.00 0.00
#> lane4_3600STDY6184357_GCTATGAC_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184358_GCTGTGAA_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184367_ACCCAACA_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184390_CGCCTTTG_L004_17480_1     1   0.981      0.276 0.58 0.42
#> lane4_3600STDY6184391_TAAGGTCA_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184414_GAGGTCGC_L004_17480_1     1   0.000      0.982 1.00 0.00
#> lane4_3600STDY6184438_TAGCGAGA_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184447_AATTTGCG_L004_17480_1     1   0.000      0.982 1.00 0.00
#> lane4_3600STDY6184456_TGAGACTC_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184460_CCGCATGA_L004_17480_1     1   0.000      0.982 1.00 0.00
#> lane4_3600STDY6184461_AAGTAACA_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184462_GTGGTACT_L004_17480_1     1   0.000      0.982 1.00 0.00
#> lane4_3600STDY6184463_AGCTGTGC_L004_17480_1     1   0.000      0.982 1.00 0.00
#> lane4_3600STDY6184464_TTACCTTC_L004_17480_1     1   0.000      0.982 1.00 0.00
#> lane4_3600STDY6184486_CAGGCTCT_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184487_AAAGCACG_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184498_CGCCTGAT_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184504_CCTACCCG_L004_17480_1     2   0.000      1.000 0.00 1.00
#> lane4_3600STDY6184508_GAAGCGCA_L004_17480_1     1   0.000      0.982 1.00 0.00
#> lane4_3600STDY6184509_ACCTCTAC_L004_17480_1     1   0.000      0.982 1.00 0.00
#> lane4_3600STDY6184558_GAGCGCAT_L004_17480_1     1   0.000      0.982 1.00 0.00
#> lane1_3600STDY6183886_GCAATCCG_L001_17592_1     1   0.000      0.982 1.00 0.00
#> lane1_3600STDY6183965_CGGAAACA_L001_17592_1     2   0.000      1.000 0.00 1.00
#> lane1_3600STDY6184067_GATCGAAC_L001_17592_1     1   0.000      0.982 1.00 0.00
#> lane1_3600STDY6184068_GTATAGGG_L001_17592_1     1   0.000      0.982 1.00 0.00
#> lane1_3600STDY6184079_AGCTGTGC_L001_17592_1     1   0.000      0.982 1.00 0.00
#> lane1_3600STDY6184105_GGACATAT_L001_17592_1     1   0.000      0.982 1.00 0.00
#> lane1_3600STDY6184132_CGAATCGA_L001_17592_1     2   0.000      1.000 0.00 1.00

show/hide code output

cbind(get_classes(res, k = 3), get_membership(res, k = 3))
#>                                             class entropy silhouette   p1   p2   p3
#> lane1_3600STDY6167810_CGCTTCCT_L001_17236_1     3  0.0000     0.9424 0.00 0.00 1.00
#> lane1_3600STDY6168016_CCTACCCG_L001_17236_1     3  0.0000     0.9424 0.00 0.00 1.00
#> lane4_3600STDY6184216_TGAACTGG_L004_17480_1     1  0.0892     0.9587 0.98 0.02 0.00
#> lane4_3600STDY6184247_TACCACCA_L004_17480_1     1  0.0000     0.9738 1.00 0.00 0.00
#> lane4_3600STDY6184260_GTCGCTAT_L004_17480_1     1  0.0000     0.9738 1.00 0.00 0.00
#> lane4_3600STDY6184271_GACCTTAG_L004_17480_1     1  0.0000     0.9738 1.00 0.00 0.00
#> lane4_3600STDY6184282_GGCACAAC_L004_17480_1     1  0.0000     0.9738 1.00 0.00 0.00
#> lane4_3600STDY6184294_CGTTCGGT_L004_17480_1     1  0.0000     0.9738 1.00 0.00 0.00
#> lane4_3600STDY6184309_CACTCGAG_L004_17480_1     1  0.0000     0.9738 1.00 0.00 0.00
#> lane4_3600STDY6184312_CATAGGTC_L004_17480_1     2  0.1529     0.9349 0.00 0.96 0.04
#> lane4_3600STDY6184319_CCATGCAC_L004_17480_1     1  0.0000     0.9738 1.00 0.00 0.00
#> lane4_3600STDY6184324_CCTGAGCA_L004_17480_1     2  0.0892     0.9473 0.00 0.98 0.02
#> lane4_3600STDY6184342_AGAGGACC_L004_17480_1     2  0.0892     0.9473 0.00 0.98 0.02
#> lane4_3600STDY6184346_AGGATTCA_L004_17480_1     1  0.6309     0.0315 0.50 0.50 0.00
#> lane4_3600STDY6184348_ACAACGCA_L004_17480_1     2  0.0892     0.9473 0.00 0.98 0.02
#> lane4_3600STDY6184352_TCTCAGTG_L004_17480_1     1  0.0000     0.9738 1.00 0.00 0.00
#> lane4_3600STDY6184357_GCTATGAC_L004_17480_1     2  0.0000     0.9353 0.00 1.00 0.00
#> lane4_3600STDY6184358_GCTGTGAA_L004_17480_1     2  0.6192     0.2812 0.00 0.58 0.42
#> lane4_3600STDY6184367_ACCCAACA_L004_17480_1     2  0.0000     0.9353 0.00 1.00 0.00
#> lane4_3600STDY6184390_CGCCTTTG_L004_17480_1     3  0.8859     0.1066 0.12 0.40 0.48
#> lane4_3600STDY6184391_TAAGGTCA_L004_17480_1     3  0.0000     0.9424 0.00 0.00 1.00
#> lane4_3600STDY6184414_GAGGTCGC_L004_17480_1     1  0.0000     0.9738 1.00 0.00 0.00
#> lane4_3600STDY6184438_TAGCGAGA_L004_17480_1     3  0.0000     0.9424 0.00 0.00 1.00
#> lane4_3600STDY6184447_AATTTGCG_L004_17480_1     1  0.0000     0.9738 1.00 0.00 0.00
#> lane4_3600STDY6184456_TGAGACTC_L004_17480_1     2  0.0892     0.9473 0.00 0.98 0.02
#> lane4_3600STDY6184460_CCGCATGA_L004_17480_1     1  0.0000     0.9738 1.00 0.00 0.00
#> lane4_3600STDY6184461_AAGTAACA_L004_17480_1     3  0.0000     0.9424 0.00 0.00 1.00
#> lane4_3600STDY6184462_GTGGTACT_L004_17480_1     1  0.0000     0.9738 1.00 0.00 0.00
#> lane4_3600STDY6184463_AGCTGTGC_L004_17480_1     3  0.0892     0.9256 0.02 0.00 0.98
#> lane4_3600STDY6184464_TTACCTTC_L004_17480_1     1  0.0000     0.9738 1.00 0.00 0.00
#> lane4_3600STDY6184486_CAGGCTCT_L004_17480_1     3  0.0000     0.9424 0.00 0.00 1.00
#> lane4_3600STDY6184487_AAAGCACG_L004_17480_1     3  0.0000     0.9424 0.00 0.00 1.00
#> lane4_3600STDY6184498_CGCCTGAT_L004_17480_1     2  0.0892     0.9473 0.00 0.98 0.02
#> lane4_3600STDY6184504_CCTACCCG_L004_17480_1     2  0.0892     0.9473 0.00 0.98 0.02
#> lane4_3600STDY6184508_GAAGCGCA_L004_17480_1     1  0.0000     0.9738 1.00 0.00 0.00
#> lane4_3600STDY6184509_ACCTCTAC_L004_17480_1     1  0.0000     0.9738 1.00 0.00 0.00
#> lane4_3600STDY6184558_GAGCGCAT_L004_17480_1     1  0.0892     0.9587 0.98 0.02 0.00
#> lane1_3600STDY6183886_GCAATCCG_L001_17592_1     1  0.0000     0.9738 1.00 0.00 0.00
#> lane1_3600STDY6183965_CGGAAACA_L001_17592_1     2  0.1529     0.9347 0.00 0.96 0.04
#> lane1_3600STDY6184067_GATCGAAC_L001_17592_1     1  0.0000     0.9738 1.00 0.00 0.00
#> lane1_3600STDY6184068_GTATAGGG_L001_17592_1     1  0.0000     0.9738 1.00 0.00 0.00
#> lane1_3600STDY6184079_AGCTGTGC_L001_17592_1     1  0.0000     0.9738 1.00 0.00 0.00
#> lane1_3600STDY6184105_GGACATAT_L001_17592_1     3  0.0892     0.9256 0.02 0.00 0.98
#> lane1_3600STDY6184132_CGAATCGA_L001_17592_1     3  0.0000     0.9424 0.00 0.00 1.00

show/hide code output

cbind(get_classes(res, k = 4), get_membership(res, k = 4))
#>                                             class entropy silhouette   p1   p2   p3   p4
#> lane1_3600STDY6167810_CGCTTCCT_L001_17236_1     3  0.1211     0.9472 0.00 0.00 0.96 0.04
#> lane1_3600STDY6168016_CCTACCCG_L001_17236_1     3  0.1211     0.9472 0.00 0.00 0.96 0.04
#> lane4_3600STDY6184216_TGAACTGG_L004_17480_1     4  0.1637     0.8235 0.06 0.00 0.00 0.94
#> lane4_3600STDY6184247_TACCACCA_L004_17480_1     1  0.3975     0.7399 0.76 0.00 0.00 0.24
#> lane4_3600STDY6184260_GTCGCTAT_L004_17480_1     1  0.3400     0.8119 0.82 0.00 0.00 0.18
#> lane4_3600STDY6184271_GACCTTAG_L004_17480_1     1  0.0707     0.8884 0.98 0.00 0.00 0.02
#> lane4_3600STDY6184282_GGCACAAC_L004_17480_1     1  0.0707     0.8856 0.98 0.00 0.00 0.02
#> lane4_3600STDY6184294_CGTTCGGT_L004_17480_1     1  0.1211     0.8870 0.96 0.00 0.00 0.04
#> lane4_3600STDY6184309_CACTCGAG_L004_17480_1     1  0.3400     0.8122 0.82 0.00 0.00 0.18
#> lane4_3600STDY6184312_CATAGGTC_L004_17480_1     2  0.2411     0.9207 0.00 0.92 0.04 0.04
#> lane4_3600STDY6184319_CCATGCAC_L004_17480_1     1  0.0707     0.8884 0.98 0.00 0.00 0.02
#> lane4_3600STDY6184324_CCTGAGCA_L004_17480_1     2  0.0000     0.9586 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184342_AGAGGACC_L004_17480_1     2  0.0000     0.9586 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184346_AGGATTCA_L004_17480_1     4  0.1637     0.7928 0.00 0.06 0.00 0.94
#> lane4_3600STDY6184348_ACAACGCA_L004_17480_1     2  0.0000     0.9586 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184352_TCTCAGTG_L004_17480_1     4  0.4948     0.0457 0.44 0.00 0.00 0.56
#> lane4_3600STDY6184357_GCTATGAC_L004_17480_1     2  0.2011     0.9021 0.00 0.92 0.00 0.08
#> lane4_3600STDY6184358_GCTGTGAA_L004_17480_1     2  0.3525     0.8624 0.00 0.86 0.10 0.04
#> lane4_3600STDY6184367_ACCCAACA_L004_17480_1     2  0.0707     0.9492 0.00 0.98 0.00 0.02
#> lane4_3600STDY6184390_CGCCTTTG_L004_17480_1     4  0.3935     0.7570 0.02 0.06 0.06 0.86
#> lane4_3600STDY6184391_TAAGGTCA_L004_17480_1     3  0.0000     0.9568 0.00 0.00 1.00 0.00
#> lane4_3600STDY6184414_GAGGTCGC_L004_17480_1     1  0.2345     0.8657 0.90 0.00 0.00 0.10
#> lane4_3600STDY6184438_TAGCGAGA_L004_17480_1     3  0.0000     0.9568 0.00 0.00 1.00 0.00
#> lane4_3600STDY6184447_AATTTGCG_L004_17480_1     1  0.4522     0.6008 0.68 0.00 0.00 0.32
#> lane4_3600STDY6184456_TGAGACTC_L004_17480_1     2  0.0000     0.9586 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184460_CCGCATGA_L004_17480_1     1  0.1211     0.8870 0.96 0.00 0.00 0.04
#> lane4_3600STDY6184461_AAGTAACA_L004_17480_1     3  0.0000     0.9568 0.00 0.00 1.00 0.00
#> lane4_3600STDY6184462_GTGGTACT_L004_17480_1     1  0.0000     0.8907 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184463_AGCTGTGC_L004_17480_1     3  0.1913     0.9207 0.02 0.00 0.94 0.04
#> lane4_3600STDY6184464_TTACCTTC_L004_17480_1     1  0.3400     0.8105 0.82 0.00 0.00 0.18
#> lane4_3600STDY6184486_CAGGCTCT_L004_17480_1     3  0.0000     0.9568 0.00 0.00 1.00 0.00
#> lane4_3600STDY6184487_AAAGCACG_L004_17480_1     3  0.2921     0.8239 0.00 0.14 0.86 0.00
#> lane4_3600STDY6184498_CGCCTGAT_L004_17480_1     2  0.0000     0.9586 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184504_CCTACCCG_L004_17480_1     2  0.0000     0.9586 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184508_GAAGCGCA_L004_17480_1     1  0.3172     0.8278 0.84 0.00 0.00 0.16
#> lane4_3600STDY6184509_ACCTCTAC_L004_17480_1     1  0.0000     0.8907 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184558_GAGCGCAT_L004_17480_1     4  0.1637     0.8235 0.06 0.00 0.00 0.94
#> lane1_3600STDY6183886_GCAATCCG_L001_17592_1     1  0.0707     0.8884 0.98 0.00 0.00 0.02
#> lane1_3600STDY6183965_CGGAAACA_L001_17592_1     2  0.2411     0.9207 0.00 0.92 0.04 0.04
#> lane1_3600STDY6184067_GATCGAAC_L001_17592_1     1  0.0707     0.8884 0.98 0.00 0.00 0.02
#> lane1_3600STDY6184068_GTATAGGG_L001_17592_1     1  0.0707     0.8884 0.98 0.00 0.00 0.02
#> lane1_3600STDY6184079_AGCTGTGC_L001_17592_1     1  0.0707     0.8884 0.98 0.00 0.00 0.02
#> lane1_3600STDY6184105_GGACATAT_L001_17592_1     3  0.0707     0.9475 0.00 0.00 0.98 0.02
#> lane1_3600STDY6184132_CGAATCGA_L001_17592_1     3  0.1913     0.9374 0.00 0.02 0.94 0.04

Heatmaps for the consensus matrix. It visualizes the probability of two samples to be in a same group.

consensus_heatmap(res, k = 2)

plot of chunk tab-node-0222-consensus-heatmap-1

consensus_heatmap(res, k = 3)

plot of chunk tab-node-0222-consensus-heatmap-2

consensus_heatmap(res, k = 4)

plot of chunk tab-node-0222-consensus-heatmap-3

Heatmaps for the membership of samples in all partitions to see how consistent they are:

membership_heatmap(res, k = 2)

plot of chunk tab-node-0222-membership-heatmap-1

membership_heatmap(res, k = 3)

plot of chunk tab-node-0222-membership-heatmap-2

membership_heatmap(res, k = 4)

plot of chunk tab-node-0222-membership-heatmap-3

As soon as the classes for columns are determined, the signatures that are significantly different between subgroups can be looked for. Following are the heatmaps for signatures.

Signature heatmaps where rows are scaled:

get_signatures(res, k = 2)

plot of chunk tab-node-0222-get-signatures-1

get_signatures(res, k = 3)

plot of chunk tab-node-0222-get-signatures-2

get_signatures(res, k = 4)

plot of chunk tab-node-0222-get-signatures-3

Signature heatmaps where rows are not scaled:

get_signatures(res, k = 2, scale_rows = FALSE)

plot of chunk tab-node-0222-get-signatures-no-scale-1

get_signatures(res, k = 3, scale_rows = FALSE)

plot of chunk tab-node-0222-get-signatures-no-scale-2

get_signatures(res, k = 4, scale_rows = FALSE)

plot of chunk tab-node-0222-get-signatures-no-scale-3

Compare the overlap of signatures from different k:

compare_signatures(res)

plot of chunk node-0222-signature_compare

get_signature() returns a data frame invisibly. To get the list of signatures, the function call should be assigned to a variable explicitly. In following code, if plot argument is set to FALSE, no heatmap is plotted while only the differential analysis is performed.

# code only for demonstration
tb = get_signature(res, k = ..., plot = FALSE)

An example of the output of tb is:

#>   which_row         fdr    mean_1    mean_2 scaled_mean_1 scaled_mean_2 km
#> 1        38 0.042760348  8.373488  9.131774    -0.5533452     0.5164555  1
#> 2        40 0.018707592  7.106213  8.469186    -0.6173731     0.5762149  1
#> 3        55 0.019134737 10.221463 11.207825    -0.6159697     0.5749050  1
#> 4        59 0.006059896  5.921854  7.869574    -0.6899429     0.6439467  1
#> 5        60 0.018055526  8.928898 10.211722    -0.6204761     0.5791110  1
#> 6        98 0.009384629 15.714769 14.887706     0.6635654    -0.6193277  2
...

The columns in tb are:

  1. which_row: row indices corresponding to the input matrix.
  2. fdr: FDR for the differential test.
  3. mean_x: The mean value in group x.
  4. scaled_mean_x: The mean value in group x after rows are scaled.
  5. km: Row groups if k-means clustering is applied to rows (which is done by automatically selecting number of clusters).

If there are too many signatures, top_signatures = ... can be set to only show the signatures with the highest FDRs:

# code only for demonstration
# e.g. to show the top 500 most significant rows
tb = get_signature(res, k = ..., top_signatures = 500)

If the signatures are defined as these which are uniquely high in current group, diff_method argument can be set to "uniquely_high_in_one_group":

# code only for demonstration
tb = get_signature(res, k = ..., diff_method = "uniquely_high_in_one_group")

UMAP plot which shows how samples are separated.

dimension_reduction(res, k = 2, method = "UMAP")

plot of chunk tab-node-0222-dimension-reduction-1

dimension_reduction(res, k = 3, method = "UMAP")

plot of chunk tab-node-0222-dimension-reduction-2

dimension_reduction(res, k = 4, method = "UMAP")

plot of chunk tab-node-0222-dimension-reduction-3

Following heatmap shows how subgroups are split when increasing k:

collect_classes(res)

plot of chunk node-0222-collect-classes

Test correlation between subgroups and known annotations. If the known annotation is numeric, one-way ANOVA test is applied, and if the known annotation is discrete, chi-squared contingency table test is applied.

test_to_known_factors(res)
#>             n_sample phenotype(p-value) k
#> ATC:skmeans       43             0.3688 2
#> ATC:skmeans       41             0.0384 3
#> ATC:skmeans       43             0.0744 4

If matrix rows can be associated to genes, consider to use functional_enrichment(res, ...) to perform function enrichment for the signature genes. See this vignette for more detailed explanations.


Node023

Parent node: Node02. Child nodes: Node0111-leaf , Node0112-leaf , Node0113-leaf , Node0121 , Node0122-leaf , Node0123 , Node0211-leaf , Node0212-leaf , Node0213-leaf , Node0221-leaf , Node0222 , Node0223-leaf , Node0224-leaf , Node0231-leaf , Node0232-leaf , Node0311-leaf , Node0312-leaf , Node0313-leaf , Node0341-leaf , Node0342 .

The object with results only for a single top-value method and a single partitioning method can be extracted as:

res = res_rh["023"]

A summary of res and all the functions that can be applied to it:

res
#> A 'ConsensusPartition' object with k = 2, 3, 4.
#>   On a matrix with 15048 rows and 128 columns.
#>   Top rows (1505) are extracted by 'ATC' method.
#>   Subgroups are detected by 'skmeans' method.
#>   Performed in total 150 partitions by row resampling.
#>   Best k for subgroups seems to be 3.
#> 
#> Following methods can be applied to this 'ConsensusPartition' object:
#>  [1] "cola_report"             "collect_classes"         "collect_plots"          
#>  [4] "collect_stats"           "colnames"                "compare_partitions"     
#>  [7] "compare_signatures"      "consensus_heatmap"       "dimension_reduction"    
#> [10] "functional_enrichment"   "get_anno_col"            "get_anno"               
#> [13] "get_classes"             "get_consensus"           "get_matrix"             
#> [16] "get_membership"          "get_param"               "get_signatures"         
#> [19] "get_stats"               "is_best_k"               "is_stable_k"            
#> [22] "membership_heatmap"      "ncol"                    "nrow"                   
#> [25] "plot_ecdf"               "predict_classes"         "rownames"               
#> [28] "select_partition_number" "show"                    "suggest_best_k"         
#> [31] "test_to_known_factors"   "top_rows_heatmap"

collect_plots() function collects all the plots made from res for all k (number of subgroups) into one single page to provide an easy and fast comparison between different k.

collect_plots(res)

plot of chunk node-023-collect-plots

The plots are:

All the plots in panels can be made by individual functions and they are plotted later in this section.

select_partition_number() produces several plots showing different statistics for choosing “optimized” k. There are following statistics:

The detailed explanations of these statistics can be found in the cola vignette.

Generally speaking, higher 1-PAC score, higher mean silhouette score or higher concordance corresponds to better partition. Rand index and Jaccard index measure how similar the current partition is compared to partition with k-1. If they are too similar, we won't accept k is better than k-1.

select_partition_number(res)

plot of chunk node-023-select-partition-number

The numeric values for all these statistics can be obtained by get_stats().

get_stats(res)
#>   k 1-PAC mean_silhouette concordance area_increased  Rand Jaccard
#> 2 2 1.000           0.993       0.997         0.4963 0.504   0.504
#> 3 3 0.944           0.913       0.961         0.1894 0.879   0.764
#> 4 4 0.872           0.788       0.905         0.0576 0.926   0.826

suggest_best_k() suggests the best \(k\) based on these statistics. The rules are as follows:

suggest_best_k(res)
#> [1] 3
#> attr(,"optional")
#> [1] 2

There is also optional best \(k\) = 2 that is worth to check.

Following is the table of the partitions (You need to click the show/hide code output link to see it). The membership matrix (columns with name p*) is inferred by clue::cl_consensus() function with the SE method. Basically the value in the membership matrix represents the probability to belong to a certain group. The finall subgroup label for an item is determined with the group with highest probability it belongs to.

In get_classes() function, the entropy is calculated from the membership matrix and the silhouette score is calculated from the consensus matrix.

show/hide code output

cbind(get_classes(res, k = 2), get_membership(res, k = 2))
#>                                             class entropy silhouette   p1   p2
#> lane1_3600STDY6167897_GTCAAGCT_L001_17236_1     2   0.000      0.995 0.00 1.00
#> lane4_3600STDY6184257_GAGGTGCT_L004_17480_1     2   0.000      0.995 0.00 1.00
#> lane4_3600STDY6184261_GGAATGAT_L004_17480_1     2   0.000      0.995 0.00 1.00
#> lane4_3600STDY6184270_GCAATCCG_L004_17480_1     2   0.000      0.995 0.00 1.00
#> lane4_3600STDY6184364_CATCCGTA_L004_17480_1     2   0.000      0.995 0.00 1.00
#> lane4_3600STDY6184412_GCATCCGG_L004_17480_1     2   0.000      0.995 0.00 1.00
#> lane4_3600STDY6184448_TGGGTTGG_L004_17480_1     2   0.000      0.995 0.00 1.00
#> lane4_3600STDY6184510_GATTGCGT_L004_17480_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6183839_TCATTGAG_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183841_TATGCCAG_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183857_TGCTGATA_L001_17592_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6183864_TGCGTGAA_L001_17592_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6183865_GGTGAGTT_L001_17592_1     1   0.402      0.913 0.92 0.08
#> lane1_3600STDY6183874_GCATGGCT_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183881_GAGGATGG_L001_17592_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6183882_GTTGTCGG_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183884_GATAGAGG_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183885_GTGTGTCG_L001_17592_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6183887_GACCTTAG_L001_17592_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6183888_GCCTGTTC_L001_17592_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6183889_GCACTGTC_L001_17592_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6183891_GATTCATC_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183898_GGCACAAC_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183905_GGCAAGCA_L001_17592_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6183908_GCAGGTAA_L001_17592_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6183909_GCGTCGAA_L001_17592_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6183910_CGTTCGGT_L001_17592_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6183911_CACCAGGT_L001_17592_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6183912_CTGCGAGT_L001_17592_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6183913_CCGTATCT_L001_17592_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6183914_CGCTTCCT_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183927_CTTGCTTC_L001_17592_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6183929_CACATTGC_L001_17592_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6183932_CAGCTGAC_L001_17592_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6183933_CTCAAGAC_L001_17592_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6183934_CGTGTCAC_L001_17592_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6183953_AAGAGTAG_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183956_ACAAGTGC_L001_17592_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6183957_ATGGATCC_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183958_AGAGGACC_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183959_ATCTCCAC_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183960_ATTGGCTA_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183970_CCTAAGAT_L001_17592_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6183975_ACCTTCAA_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183977_CAAAACCG_L001_17592_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6183978_GCTGGACA_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183979_AAGTCGTA_L001_17592_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6183980_CATCCGTA_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183981_TTGTGTCT_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183982_TGCTCTAG_L001_17592_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6183983_ACCCAACA_L001_17592_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6183984_CGATCTGA_L001_17592_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6183985_GTTCCACG_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183986_ACTCTTTC_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183987_TATTGGAG_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183992_TGTCATCT_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183993_ATAGCTCT_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183994_AGTCCAAC_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183996_TCTGACGC_L001_17592_1     1   0.242      0.958 0.96 0.04
#> lane1_3600STDY6183997_TGTCGACT_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183998_GTCACGTA_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183999_TTGAGCGA_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184014_ACGTACTA_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184016_GCCTGCCC_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184018_CTTGACCG_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184019_AGGTCTAA_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184020_CGAGATCC_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184022_GCGCTGAT_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184034_AGTGTAGT_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184039_ACTTGGGG_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184040_GGCTGCTT_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184042_CTCGTCGA_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184043_TCTACAGT_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184044_CTTCTAGA_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184046_ATAAGACT_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184047_GTTTTTCG_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184051_TGACCCAC_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184058_GCGGGTCT_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184061_GTCTGAGG_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184062_TCTGGCGA_L001_17592_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6184063_AATTTGCG_L001_17592_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6184064_TGGGTTGG_L001_17592_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6184065_AGTTGAAA_L001_17592_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6184066_GACCGGAA_L001_17592_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6184070_AGTCCGAT_L001_17592_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6184071_ATACAGGC_L001_17592_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6184078_GTGGTACT_L001_17592_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6184081_TCCGGGTA_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184082_CTACGTAA_L001_17592_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6184085_TTCTTAGC_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184086_TGAGTAAG_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184087_AAGTGATA_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184088_TCGATGCG_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184089_TATTCTGG_L001_17592_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6184090_AGCCGTGA_L001_17592_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6184091_AAGCCTTC_L001_17592_1     2   0.827      0.648 0.26 0.74
#> lane1_3600STDY6184092_AGGTATCC_L001_17592_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6184094_CTGTTTGA_L001_17592_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6184095_GGAATTTC_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184102_CAGGCTCT_L001_17592_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6184103_AAAGCACG_L001_17592_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6184104_GTATACAC_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184106_CGGTTGGG_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184111_ATAACTAG_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184112_AATAGAGA_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184113_TCACCATT_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184114_CGCCTGAT_L001_17592_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6184115_GCGTGAAC_L001_17592_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6184116_TAAGGGTG_L001_17592_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6184119_TGGCAAAA_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184126_GATTGCGT_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184130_CGCACCTA_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184134_AGCTCTTT_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184135_TAATCCCT_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184136_AGGACACT_L001_17592_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6184138_AAACATCA_L001_17592_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6184140_GTTATGGC_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184141_ATCCCCTA_L001_17592_1     2   0.000      0.995 0.00 1.00
#> lane1_3600STDY6184143_CAATTGTT_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184144_AAACCCGT_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184151_AGGGATTC_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184154_GGAGTTGA_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184158_GACGATTG_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184160_GAAGAGAT_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184163_GCTTAAAC_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184164_GTTCCGCA_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184167_GTACGGAC_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184170_AGCAACGA_L001_17592_1     1   0.000      0.998 1.00 0.00

show/hide code output

cbind(get_classes(res, k = 3), get_membership(res, k = 3))
#>                                             class entropy silhouette   p1   p2   p3
#> lane1_3600STDY6167897_GTCAAGCT_L001_17236_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane4_3600STDY6184257_GAGGTGCT_L004_17480_1     2  0.0892      0.964 0.00 0.98 0.02
#> lane4_3600STDY6184261_GGAATGAT_L004_17480_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane4_3600STDY6184270_GCAATCCG_L004_17480_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane4_3600STDY6184364_CATCCGTA_L004_17480_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane4_3600STDY6184412_GCATCCGG_L004_17480_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane4_3600STDY6184448_TGGGTTGG_L004_17480_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane4_3600STDY6184510_GATTGCGT_L004_17480_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6183839_TCATTGAG_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6183841_TATGCCAG_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6183857_TGCTGATA_L001_17592_1     3  0.0000      0.747 0.00 0.00 1.00
#> lane1_3600STDY6183864_TGCGTGAA_L001_17592_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6183865_GGTGAGTT_L001_17592_1     3  0.0000      0.747 0.00 0.00 1.00
#> lane1_3600STDY6183874_GCATGGCT_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6183881_GAGGATGG_L001_17592_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6183882_GTTGTCGG_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6183884_GATAGAGG_L001_17592_1     1  0.5397      0.478 0.72 0.00 0.28
#> lane1_3600STDY6183885_GTGTGTCG_L001_17592_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6183887_GACCTTAG_L001_17592_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6183888_GCCTGTTC_L001_17592_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6183889_GCACTGTC_L001_17592_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6183891_GATTCATC_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6183898_GGCACAAC_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6183905_GGCAAGCA_L001_17592_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6183908_GCAGGTAA_L001_17592_1     3  0.4555      0.583 0.00 0.20 0.80
#> lane1_3600STDY6183909_GCGTCGAA_L001_17592_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6183910_CGTTCGGT_L001_17592_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6183911_CACCAGGT_L001_17592_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6183912_CTGCGAGT_L001_17592_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6183913_CCGTATCT_L001_17592_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6183914_CGCTTCCT_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6183927_CTTGCTTC_L001_17592_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6183929_CACATTGC_L001_17592_1     2  0.6045      0.408 0.00 0.62 0.38
#> lane1_3600STDY6183932_CAGCTGAC_L001_17592_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6183933_CTCAAGAC_L001_17592_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6183934_CGTGTCAC_L001_17592_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6183953_AAGAGTAG_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6183956_ACAAGTGC_L001_17592_1     2  0.5948      0.454 0.00 0.64 0.36
#> lane1_3600STDY6183957_ATGGATCC_L001_17592_1     3  0.0000      0.747 0.00 0.00 1.00
#> lane1_3600STDY6183958_AGAGGACC_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6183959_ATCTCCAC_L001_17592_1     3  0.6280      0.374 0.46 0.00 0.54
#> lane1_3600STDY6183960_ATTGGCTA_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6183970_CCTAAGAT_L001_17592_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6183975_ACCTTCAA_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6183977_CAAAACCG_L001_17592_1     3  0.0892      0.739 0.00 0.02 0.98
#> lane1_3600STDY6183978_GCTGGACA_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6183979_AAGTCGTA_L001_17592_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6183980_CATCCGTA_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6183981_TTGTGTCT_L001_17592_1     3  0.6302      0.315 0.48 0.00 0.52
#> lane1_3600STDY6183982_TGCTCTAG_L001_17592_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6183983_ACCCAACA_L001_17592_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6183984_CGATCTGA_L001_17592_1     3  0.0000      0.747 0.00 0.00 1.00
#> lane1_3600STDY6183985_GTTCCACG_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6183986_ACTCTTTC_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6183987_TATTGGAG_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6183992_TGTCATCT_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6183993_ATAGCTCT_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6183994_AGTCCAAC_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6183996_TCTGACGC_L001_17592_1     1  0.6849      0.134 0.60 0.02 0.38
#> lane1_3600STDY6183997_TGTCGACT_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6183998_GTCACGTA_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6183999_TTGAGCGA_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6184014_ACGTACTA_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6184016_GCCTGCCC_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6184018_CTTGACCG_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6184019_AGGTCTAA_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6184020_CGAGATCC_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6184022_GCGCTGAT_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6184034_AGTGTAGT_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6184039_ACTTGGGG_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6184040_GGCTGCTT_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6184042_CTCGTCGA_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6184043_TCTACAGT_L001_17592_1     3  0.6309      0.245 0.50 0.00 0.50
#> lane1_3600STDY6184044_CTTCTAGA_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6184046_ATAAGACT_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6184047_GTTTTTCG_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6184051_TGACCCAC_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6184058_GCGGGTCT_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6184061_GTCTGAGG_L001_17592_1     1  0.0892      0.961 0.98 0.00 0.02
#> lane1_3600STDY6184062_TCTGGCGA_L001_17592_1     3  0.6045      0.233 0.00 0.38 0.62
#> lane1_3600STDY6184063_AATTTGCG_L001_17592_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6184064_TGGGTTGG_L001_17592_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6184065_AGTTGAAA_L001_17592_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6184066_GACCGGAA_L001_17592_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6184070_AGTCCGAT_L001_17592_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6184071_ATACAGGC_L001_17592_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6184078_GTGGTACT_L001_17592_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6184081_TCCGGGTA_L001_17592_1     3  0.0000      0.747 0.00 0.00 1.00
#> lane1_3600STDY6184082_CTACGTAA_L001_17592_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6184085_TTCTTAGC_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6184086_TGAGTAAG_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6184087_AAGTGATA_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6184088_TCGATGCG_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6184089_TATTCTGG_L001_17592_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6184090_AGCCGTGA_L001_17592_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6184091_AAGCCTTC_L001_17592_1     3  0.0000      0.747 0.00 0.00 1.00
#> lane1_3600STDY6184092_AGGTATCC_L001_17592_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6184094_CTGTTTGA_L001_17592_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6184095_GGAATTTC_L001_17592_1     3  0.4555      0.699 0.20 0.00 0.80
#> lane1_3600STDY6184102_CAGGCTCT_L001_17592_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6184103_AAAGCACG_L001_17592_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6184104_GTATACAC_L001_17592_1     3  0.5948      0.561 0.36 0.00 0.64
#> lane1_3600STDY6184106_CGGTTGGG_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6184111_ATAACTAG_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6184112_AATAGAGA_L001_17592_1     3  0.6126      0.498 0.40 0.00 0.60
#> lane1_3600STDY6184113_TCACCATT_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6184114_CGCCTGAT_L001_17592_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6184115_GCGTGAAC_L001_17592_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6184116_TAAGGGTG_L001_17592_1     2  0.2537      0.902 0.00 0.92 0.08
#> lane1_3600STDY6184119_TGGCAAAA_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6184126_GATTGCGT_L001_17592_1     3  0.6192      0.463 0.42 0.00 0.58
#> lane1_3600STDY6184130_CGCACCTA_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6184134_AGCTCTTT_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6184135_TAATCCCT_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6184136_AGGACACT_L001_17592_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6184138_AAACATCA_L001_17592_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6184140_GTTATGGC_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6184141_ATCCCCTA_L001_17592_1     2  0.0000      0.982 0.00 1.00 0.00
#> lane1_3600STDY6184143_CAATTGTT_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6184144_AAACCCGT_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6184151_AGGGATTC_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6184154_GGAGTTGA_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6184158_GACGATTG_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6184160_GAAGAGAT_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6184163_GCTTAAAC_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6184164_GTTCCGCA_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6184167_GTACGGAC_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00
#> lane1_3600STDY6184170_AGCAACGA_L001_17592_1     1  0.0000      0.986 1.00 0.00 0.00

show/hide code output

cbind(get_classes(res, k = 4), get_membership(res, k = 4))
#>                                             class entropy silhouette   p1   p2   p3   p4
#> lane1_3600STDY6167897_GTCAAGCT_L001_17236_1     2  0.0000     0.9710 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184257_GAGGTGCT_L004_17480_1     2  0.5535     0.2051 0.00 0.56 0.02 0.42
#> lane4_3600STDY6184261_GGAATGAT_L004_17480_1     2  0.0000     0.9710 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184270_GCAATCCG_L004_17480_1     2  0.0000     0.9710 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184364_CATCCGTA_L004_17480_1     2  0.0000     0.9710 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184412_GCATCCGG_L004_17480_1     2  0.0000     0.9710 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184448_TGGGTTGG_L004_17480_1     2  0.0000     0.9710 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184510_GATTGCGT_L004_17480_1     2  0.0000     0.9710 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183839_TCATTGAG_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183841_TATGCCAG_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183857_TGCTGATA_L001_17592_1     3  0.4277     0.3941 0.00 0.00 0.72 0.28
#> lane1_3600STDY6183864_TGCGTGAA_L001_17592_1     2  0.0000     0.9710 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183865_GGTGAGTT_L001_17592_1     3  0.4755     0.4044 0.04 0.00 0.76 0.20
#> lane1_3600STDY6183874_GCATGGCT_L001_17592_1     4  0.5987     0.0803 0.44 0.00 0.04 0.52
#> lane1_3600STDY6183881_GAGGATGG_L001_17592_1     2  0.0000     0.9710 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183882_GTTGTCGG_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183884_GATAGAGG_L001_17592_1     3  0.7775    -0.0722 0.38 0.00 0.38 0.24
#> lane1_3600STDY6183885_GTGTGTCG_L001_17592_1     2  0.0000     0.9710 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183887_GACCTTAG_L001_17592_1     2  0.0000     0.9710 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183888_GCCTGTTC_L001_17592_1     2  0.0000     0.9710 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183889_GCACTGTC_L001_17592_1     2  0.0000     0.9710 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183891_GATTCATC_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183898_GGCACAAC_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183905_GGCAAGCA_L001_17592_1     2  0.0000     0.9710 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183908_GCAGGTAA_L001_17592_1     3  0.6720     0.2391 0.00 0.12 0.58 0.30
#> lane1_3600STDY6183909_GCGTCGAA_L001_17592_1     2  0.0000     0.9710 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183910_CGTTCGGT_L001_17592_1     2  0.0000     0.9710 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183911_CACCAGGT_L001_17592_1     2  0.0000     0.9710 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183912_CTGCGAGT_L001_17592_1     2  0.0000     0.9710 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183913_CCGTATCT_L001_17592_1     2  0.0000     0.9710 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183914_CGCTTCCT_L001_17592_1     1  0.6216     0.3861 0.66 0.00 0.22 0.12
#> lane1_3600STDY6183927_CTTGCTTC_L001_17592_1     2  0.0000     0.9710 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183929_CACATTGC_L001_17592_1     3  0.7913     0.0415 0.00 0.32 0.36 0.32
#> lane1_3600STDY6183932_CAGCTGAC_L001_17592_1     2  0.0000     0.9710 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183933_CTCAAGAC_L001_17592_1     2  0.0000     0.9710 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183934_CGTGTCAC_L001_17592_1     2  0.0000     0.9710 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183953_AAGAGTAG_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183956_ACAAGTGC_L001_17592_1     3  0.7544     0.0566 0.00 0.34 0.46 0.20
#> lane1_3600STDY6183957_ATGGATCC_L001_17592_1     3  0.4713     0.3522 0.00 0.00 0.64 0.36
#> lane1_3600STDY6183958_AGAGGACC_L001_17592_1     1  0.0707     0.9302 0.98 0.00 0.00 0.02
#> lane1_3600STDY6183959_ATCTCCAC_L001_17592_1     3  0.6586     0.0148 0.42 0.00 0.50 0.08
#> lane1_3600STDY6183960_ATTGGCTA_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183970_CCTAAGAT_L001_17592_1     4  0.6005    -0.0577 0.00 0.46 0.04 0.50
#> lane1_3600STDY6183975_ACCTTCAA_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183977_CAAAACCG_L001_17592_1     3  0.4227     0.4017 0.00 0.06 0.82 0.12
#> lane1_3600STDY6183978_GCTGGACA_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183979_AAGTCGTA_L001_17592_1     2  0.0000     0.9710 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183980_CATCCGTA_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183981_TTGTGTCT_L001_17592_1     4  0.7699    -0.1526 0.22 0.00 0.38 0.40
#> lane1_3600STDY6183982_TGCTCTAG_L001_17592_1     2  0.0707     0.9505 0.00 0.98 0.02 0.00
#> lane1_3600STDY6183983_ACCCAACA_L001_17592_1     2  0.0000     0.9710 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183984_CGATCTGA_L001_17592_1     3  0.4277     0.3873 0.00 0.00 0.72 0.28
#> lane1_3600STDY6183985_GTTCCACG_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183986_ACTCTTTC_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183987_TATTGGAG_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183992_TGTCATCT_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183993_ATAGCTCT_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183994_AGTCCAAC_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183996_TCTGACGC_L001_17592_1     4  0.4755     0.1207 0.20 0.00 0.04 0.76
#> lane1_3600STDY6183997_TGTCGACT_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183998_GTCACGTA_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183999_TTGAGCGA_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184014_ACGTACTA_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184016_GCCTGCCC_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184018_CTTGACCG_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184019_AGGTCTAA_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184020_CGAGATCC_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184022_GCGCTGAT_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184034_AGTGTAGT_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184039_ACTTGGGG_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184040_GGCTGCTT_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184042_CTCGTCGA_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184043_TCTACAGT_L001_17592_1     1  0.7365    -0.2960 0.44 0.00 0.40 0.16
#> lane1_3600STDY6184044_CTTCTAGA_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184046_ATAAGACT_L001_17592_1     1  0.1211     0.9104 0.96 0.00 0.00 0.04
#> lane1_3600STDY6184047_GTTTTTCG_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184051_TGACCCAC_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184058_GCGGGTCT_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184061_GTCTGAGG_L001_17592_1     1  0.4522     0.4110 0.68 0.00 0.00 0.32
#> lane1_3600STDY6184062_TCTGGCGA_L001_17592_1     4  0.4581    -0.0813 0.00 0.08 0.12 0.80
#> lane1_3600STDY6184063_AATTTGCG_L001_17592_1     2  0.0000     0.9710 0.00 1.00 0.00 0.00
#> lane1_3600STDY6184064_TGGGTTGG_L001_17592_1     2  0.0000     0.9710 0.00 1.00 0.00 0.00
#> lane1_3600STDY6184065_AGTTGAAA_L001_17592_1     2  0.0000     0.9710 0.00 1.00 0.00 0.00
#> lane1_3600STDY6184066_GACCGGAA_L001_17592_1     2  0.0000     0.9710 0.00 1.00 0.00 0.00
#> lane1_3600STDY6184070_AGTCCGAT_L001_17592_1     2  0.0000     0.9710 0.00 1.00 0.00 0.00
#> lane1_3600STDY6184071_ATACAGGC_L001_17592_1     2  0.0000     0.9710 0.00 1.00 0.00 0.00
#> lane1_3600STDY6184078_GTGGTACT_L001_17592_1     2  0.0000     0.9710 0.00 1.00 0.00 0.00
#> lane1_3600STDY6184081_TCCGGGTA_L001_17592_1     3  0.5956     0.3545 0.10 0.00 0.68 0.22
#> lane1_3600STDY6184082_CTACGTAA_L001_17592_1     2  0.0000     0.9710 0.00 1.00 0.00 0.00
#> lane1_3600STDY6184085_TTCTTAGC_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184086_TGAGTAAG_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184087_AAGTGATA_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184088_TCGATGCG_L001_17592_1     1  0.0707     0.9302 0.98 0.00 0.00 0.02
#> lane1_3600STDY6184089_TATTCTGG_L001_17592_1     2  0.0000     0.9710 0.00 1.00 0.00 0.00
#> lane1_3600STDY6184090_AGCCGTGA_L001_17592_1     2  0.0000     0.9710 0.00 1.00 0.00 0.00
#> lane1_3600STDY6184091_AAGCCTTC_L001_17592_1     3  0.4522     0.3245 0.00 0.00 0.68 0.32
#> lane1_3600STDY6184092_AGGTATCC_L001_17592_1     2  0.0000     0.9710 0.00 1.00 0.00 0.00
#> lane1_3600STDY6184094_CTGTTTGA_L001_17592_1     2  0.1211     0.9295 0.00 0.96 0.04 0.00
#> lane1_3600STDY6184095_GGAATTTC_L001_17592_1     3  0.5327     0.2568 0.22 0.00 0.72 0.06
#> lane1_3600STDY6184102_CAGGCTCT_L001_17592_1     2  0.0000     0.9710 0.00 1.00 0.00 0.00
#> lane1_3600STDY6184103_AAAGCACG_L001_17592_1     2  0.0000     0.9710 0.00 1.00 0.00 0.00
#> lane1_3600STDY6184104_GTATACAC_L001_17592_1     1  0.5594    -0.0398 0.52 0.00 0.46 0.02
#> lane1_3600STDY6184106_CGGTTGGG_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184111_ATAACTAG_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184112_AATAGAGA_L001_17592_1     1  0.6805    -0.1181 0.50 0.00 0.40 0.10
#> lane1_3600STDY6184113_TCACCATT_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184114_CGCCTGAT_L001_17592_1     2  0.0000     0.9710 0.00 1.00 0.00 0.00
#> lane1_3600STDY6184115_GCGTGAAC_L001_17592_1     2  0.0000     0.9710 0.00 1.00 0.00 0.00
#> lane1_3600STDY6184116_TAAGGGTG_L001_17592_1     2  0.4855     0.3046 0.00 0.60 0.00 0.40
#> lane1_3600STDY6184119_TGGCAAAA_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184126_GATTGCGT_L001_17592_1     3  0.6808     0.0303 0.32 0.00 0.56 0.12
#> lane1_3600STDY6184130_CGCACCTA_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184134_AGCTCTTT_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184135_TAATCCCT_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184136_AGGACACT_L001_17592_1     2  0.4522     0.4988 0.00 0.68 0.00 0.32
#> lane1_3600STDY6184138_AAACATCA_L001_17592_1     2  0.0000     0.9710 0.00 1.00 0.00 0.00
#> lane1_3600STDY6184140_GTTATGGC_L001_17592_1     1  0.4894     0.6509 0.78 0.00 0.12 0.10
#> lane1_3600STDY6184141_ATCCCCTA_L001_17592_1     2  0.0000     0.9710 0.00 1.00 0.00 0.00
#> lane1_3600STDY6184143_CAATTGTT_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184144_AAACCCGT_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184151_AGGGATTC_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184154_GGAGTTGA_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184158_GACGATTG_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184160_GAAGAGAT_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184163_GCTTAAAC_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184164_GTTCCGCA_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184167_GTACGGAC_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184170_AGCAACGA_L001_17592_1     1  0.0000     0.9505 1.00 0.00 0.00 0.00

Heatmaps for the consensus matrix. It visualizes the probability of two samples to be in a same group.

consensus_heatmap(res, k = 2)

plot of chunk tab-node-023-consensus-heatmap-1

consensus_heatmap(res, k = 3)

plot of chunk tab-node-023-consensus-heatmap-2

consensus_heatmap(res, k = 4)

plot of chunk tab-node-023-consensus-heatmap-3

Heatmaps for the membership of samples in all partitions to see how consistent they are:

membership_heatmap(res, k = 2)

plot of chunk tab-node-023-membership-heatmap-1

membership_heatmap(res, k = 3)

plot of chunk tab-node-023-membership-heatmap-2

membership_heatmap(res, k = 4)

plot of chunk tab-node-023-membership-heatmap-3

As soon as the classes for columns are determined, the signatures that are significantly different between subgroups can be looked for. Following are the heatmaps for signatures.

Signature heatmaps where rows are scaled:

get_signatures(res, k = 2)

plot of chunk tab-node-023-get-signatures-1

get_signatures(res, k = 3)

plot of chunk tab-node-023-get-signatures-2

get_signatures(res, k = 4)

plot of chunk tab-node-023-get-signatures-3

Signature heatmaps where rows are not scaled:

get_signatures(res, k = 2, scale_rows = FALSE)

plot of chunk tab-node-023-get-signatures-no-scale-1

get_signatures(res, k = 3, scale_rows = FALSE)

plot of chunk tab-node-023-get-signatures-no-scale-2

get_signatures(res, k = 4, scale_rows = FALSE)

plot of chunk tab-node-023-get-signatures-no-scale-3

Compare the overlap of signatures from different k:

compare_signatures(res)

plot of chunk node-023-signature_compare

get_signature() returns a data frame invisibly. To get the list of signatures, the function call should be assigned to a variable explicitly. In following code, if plot argument is set to FALSE, no heatmap is plotted while only the differential analysis is performed.

# code only for demonstration
tb = get_signature(res, k = ..., plot = FALSE)

An example of the output of tb is:

#>   which_row         fdr    mean_1    mean_2 scaled_mean_1 scaled_mean_2 km
#> 1        38 0.042760348  8.373488  9.131774    -0.5533452     0.5164555  1
#> 2        40 0.018707592  7.106213  8.469186    -0.6173731     0.5762149  1
#> 3        55 0.019134737 10.221463 11.207825    -0.6159697     0.5749050  1
#> 4        59 0.006059896  5.921854  7.869574    -0.6899429     0.6439467  1
#> 5        60 0.018055526  8.928898 10.211722    -0.6204761     0.5791110  1
#> 6        98 0.009384629 15.714769 14.887706     0.6635654    -0.6193277  2
...

The columns in tb are:

  1. which_row: row indices corresponding to the input matrix.
  2. fdr: FDR for the differential test.
  3. mean_x: The mean value in group x.
  4. scaled_mean_x: The mean value in group x after rows are scaled.
  5. km: Row groups if k-means clustering is applied to rows (which is done by automatically selecting number of clusters).

If there are too many signatures, top_signatures = ... can be set to only show the signatures with the highest FDRs:

# code only for demonstration
# e.g. to show the top 500 most significant rows
tb = get_signature(res, k = ..., top_signatures = 500)

If the signatures are defined as these which are uniquely high in current group, diff_method argument can be set to "uniquely_high_in_one_group":

# code only for demonstration
tb = get_signature(res, k = ..., diff_method = "uniquely_high_in_one_group")

UMAP plot which shows how samples are separated.

dimension_reduction(res, k = 2, method = "UMAP")

plot of chunk tab-node-023-dimension-reduction-1

dimension_reduction(res, k = 3, method = "UMAP")

plot of chunk tab-node-023-dimension-reduction-2

dimension_reduction(res, k = 4, method = "UMAP")

plot of chunk tab-node-023-dimension-reduction-3

Following heatmap shows how subgroups are split when increasing k:

collect_classes(res)

plot of chunk node-023-collect-classes

Test correlation between subgroups and known annotations. If the known annotation is numeric, one-way ANOVA test is applied, and if the known annotation is discrete, chi-squared contingency table test is applied.

test_to_known_factors(res)
#>             n_sample phenotype(p-value) k
#> ATC:skmeans      128              0.899 2
#> ATC:skmeans      118              0.479 3
#> ATC:skmeans      101              0.896 4

If matrix rows can be associated to genes, consider to use functional_enrichment(res, ...) to perform function enrichment for the signature genes. See this vignette for more detailed explanations.


Node03

Parent node: Node0. Child nodes: Node011 , Node012 , Node013-leaf , Node014-leaf , Node021 , Node022 , Node023 , Node031 , Node032-leaf , Node033-leaf , Node034 .

The object with results only for a single top-value method and a single partitioning method can be extracted as:

res = res_rh["03"]

A summary of res and all the functions that can be applied to it:

res
#> A 'ConsensusPartition' object with k = 2, 3, 4.
#>   On a matrix with 16775 rows and 450 columns.
#>   Top rows (1678) are extracted by 'ATC' method.
#>   Subgroups are detected by 'skmeans' method.
#>   Performed in total 150 partitions by row resampling.
#>   Best k for subgroups seems to be 4.
#> 
#> Following methods can be applied to this 'ConsensusPartition' object:
#>  [1] "cola_report"             "collect_classes"         "collect_plots"          
#>  [4] "collect_stats"           "colnames"                "compare_partitions"     
#>  [7] "compare_signatures"      "consensus_heatmap"       "dimension_reduction"    
#> [10] "functional_enrichment"   "get_anno_col"            "get_anno"               
#> [13] "get_classes"             "get_consensus"           "get_matrix"             
#> [16] "get_membership"          "get_param"               "get_signatures"         
#> [19] "get_stats"               "is_best_k"               "is_stable_k"            
#> [22] "membership_heatmap"      "ncol"                    "nrow"                   
#> [25] "plot_ecdf"               "predict_classes"         "rownames"               
#> [28] "select_partition_number" "show"                    "suggest_best_k"         
#> [31] "test_to_known_factors"   "top_rows_heatmap"

collect_plots() function collects all the plots made from res for all k (number of subgroups) into one single page to provide an easy and fast comparison between different k.

collect_plots(res)

plot of chunk node-03-collect-plots

The plots are:

All the plots in panels can be made by individual functions and they are plotted later in this section.

select_partition_number() produces several plots showing different statistics for choosing “optimized” k. There are following statistics:

The detailed explanations of these statistics can be found in the cola vignette.

Generally speaking, higher 1-PAC score, higher mean silhouette score or higher concordance corresponds to better partition. Rand index and Jaccard index measure how similar the current partition is compared to partition with k-1. If they are too similar, we won't accept k is better than k-1.

select_partition_number(res)

plot of chunk node-03-select-partition-number

The numeric values for all these statistics can be obtained by get_stats().

get_stats(res)
#>   k 1-PAC mean_silhouette concordance area_increased  Rand Jaccard
#> 2 2 0.947           0.975       0.988          0.497 0.503   0.503
#> 3 3 0.798           0.777       0.911          0.306 0.787   0.600
#> 4 4 1.000           0.982       0.993          0.146 0.806   0.513

suggest_best_k() suggests the best \(k\) based on these statistics. The rules are as follows:

suggest_best_k(res)
#> [1] 4
#> attr(,"optional")
#> [1] 2

There is also optional best \(k\) = 2 that is worth to check.

Following is the table of the partitions (You need to click the show/hide code output link to see it). The membership matrix (columns with name p*) is inferred by clue::cl_consensus() function with the SE method. Basically the value in the membership matrix represents the probability to belong to a certain group. The finall subgroup label for an item is determined with the group with highest probability it belongs to.

In get_classes() function, the entropy is calculated from the membership matrix and the silhouette score is calculated from the consensus matrix.

show/hide code output

cbind(get_classes(res, k = 2), get_membership(res, k = 2))
#>                                             class entropy silhouette   p1   p2
#> lane3_3600STDY6078002_TCATTGAG_L003_15987_1     2   0.000      0.985 0.00 1.00
#> lane1_3600STDY6167695_TTAGGCAT_L001_17236_1     2   0.000      0.985 0.00 1.00
#> lane1_3600STDY6167704_CTTGTACT_L001_17236_1     2   0.000      0.985 0.00 1.00
#> lane1_3600STDY6167719_TAGTGACT_L001_17236_1     2   0.000      0.985 0.00 1.00
#> lane1_3600STDY6167720_TACAGGAT_L001_17236_1     2   0.000      0.985 0.00 1.00
#> lane1_3600STDY6167721_TCCTCAAT_L001_17236_1     2   0.000      0.985 0.00 1.00
#> lane1_3600STDY6167745_TACCGAGC_L001_17236_1     2   0.000      0.985 0.00 1.00
#> lane1_3600STDY6167747_TTCGCACC_L001_17236_1     2   0.000      0.985 0.00 1.00
#> lane1_3600STDY6167799_GAGTGCGA_L001_17236_1     2   0.000      0.985 0.00 1.00
#> lane1_3600STDY6167817_CATGAATG_L001_17236_1     2   0.000      0.985 0.00 1.00
#> lane1_3600STDY6167821_CACTCGAG_L001_17236_1     2   0.000      0.985 0.00 1.00
#> lane1_3600STDY6167841_ACGTTCAT_L001_17236_1     2   0.000      0.985 0.00 1.00
#> lane1_3600STDY6167843_AGACCGTG_L001_17236_1     2   0.000      0.985 0.00 1.00
#> lane1_3600STDY6167885_GTAAGATA_L001_17236_1     2   0.000      0.985 0.00 1.00
#> lane1_3600STDY6167887_TATCTCCT_L001_17236_1     2   0.000      0.985 0.00 1.00
#> lane1_3600STDY6167898_AGCAAGTT_L001_17236_1     2   0.000      0.985 0.00 1.00
#> lane1_3600STDY6167900_ACGGCAGC_L001_17236_1     2   0.000      0.985 0.00 1.00
#> lane1_3600STDY6167901_AGAACTGA_L001_17236_1     2   0.000      0.985 0.00 1.00
#> lane1_3600STDY6167926_GAGGTCGC_L001_17236_1     2   0.000      0.985 0.00 1.00
#> lane1_3600STDY6167940_CTTCTAGA_L001_17236_1     2   0.000      0.985 0.00 1.00
#> lane1_3600STDY6167960_TGGGTTGG_L001_17236_1     2   0.000      0.985 0.00 1.00
#> lane1_3600STDY6167970_GTGTCTGA_L001_17236_1     2   0.000      0.985 0.00 1.00
#> lane1_3600STDY6167992_TTGGAGCA_L001_17236_1     2   0.000      0.985 0.00 1.00
#> lane1_3600STDY6167993_AAGGTCTG_L001_17236_1     2   0.000      0.985 0.00 1.00
#> lane1_3600STDY6168005_ACTTTACT_L001_17236_1     2   0.000      0.985 0.00 1.00
#> lane1_3600STDY6168032_AGGACACT_L001_17236_1     2   0.000      0.985 0.00 1.00
#> lane1_3600STDY6168046_AACTTTTA_L001_17236_1     2   0.000      0.985 0.00 1.00
#> lane1_3600STDY6168056_GAAGAGAT_L001_17236_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184181_ATCACGTT_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184182_CGATGTTT_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184183_TTAGGCAT_L004_17480_1     1   0.000      0.991 1.00 0.00
#> lane4_3600STDY6184184_TGACCACT_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184185_ACAGTGGT_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184186_GCCAATGT_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184187_CAGATCTG_L004_17480_1     1   0.000      0.991 1.00 0.00
#> lane4_3600STDY6184189_GATCAGCG_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184190_TAGCTTGT_L004_17480_1     2   0.469      0.895 0.10 0.90
#> lane4_3600STDY6184191_GGCTACAG_L004_17480_1     1   0.000      0.991 1.00 0.00
#> lane4_3600STDY6184193_TGGTTGTT_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184194_TCTCGGTT_L004_17480_1     1   0.000      0.991 1.00 0.00
#> lane4_3600STDY6184195_TAAGCGTT_L004_17480_1     1   0.000      0.991 1.00 0.00
#> lane4_3600STDY6184196_TCCGTCTT_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184197_TGTACCTT_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184198_TTCTGTGT_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184201_TCGAGCGT_L004_17480_1     1   0.000      0.991 1.00 0.00
#> lane4_3600STDY6184202_TGATACGT_L004_17480_1     1   0.000      0.991 1.00 0.00
#> lane4_3600STDY6184203_TGCATAGT_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184204_TTGACTCT_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184205_TGCGATCT_L004_17480_1     1   0.981      0.252 0.58 0.42
#> lane4_3600STDY6184206_TTCCTGCT_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184207_TAGTGACT_L004_17480_1     2   0.469      0.895 0.10 0.90
#> lane4_3600STDY6184209_TCCTCAAT_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184210_TGTGGTTG_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184214_TAACGCTG_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184218_TCTCACGG_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184220_TAAGTTCG_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184221_TCCAGTCG_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184225_TATGCCAG_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184226_TCAGATTC_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184228_TTCAGCTC_L004_17480_1     2   0.469      0.895 0.10 0.90
#> lane4_3600STDY6184229_TGTCTATC_L004_17480_1     2   0.680      0.798 0.18 0.82
#> lane4_3600STDY6184232_TCGTTAGC_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184233_TACCGAGC_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184235_TTCGCACC_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184236_TTGCGTAC_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184237_TCTACGAC_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184241_TGCTGATA_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184242_TAGACGGA_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184243_TGTGAAGA_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184245_TTGTTCCA_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184249_GGTGAGTT_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184250_GATCTCTT_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184251_GTGTCCTT_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184252_GACGGATT_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184253_GCAACATT_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184255_GAATCTGT_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184266_GTTGTCGG_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184269_GTGTGTCG_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184274_GCTAACTC_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184276_GTCTTGGC_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184277_GTAGAAGC_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184278_GATGGTCC_L004_17480_1     1   0.000      0.991 1.00 0.00
#> lane4_3600STDY6184279_GTGCTACC_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184281_GGTTGGAC_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184284_GTGCAGTA_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184289_GGCAAGCA_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184291_GAACGACA_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184292_GCAGGTAA_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184293_GCGTCGAA_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184296_CTGCGAGT_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184298_CGCTTCCT_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184300_CACACACT_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184301_CCTAGTAT_L004_17480_1     2   0.469      0.895 0.10 0.90
#> lane4_3600STDY6184302_CCACCGAT_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184303_CTTCACAT_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184304_CTATCATG_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184305_CATGAATG_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184308_CTAGATAG_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184310_CCGACAAG_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184315_CAACCTCC_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184316_CAGCTGAC_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184320_CGTTACTA_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184325_CAGGCTAA_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184327_AGGAGATT_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184329_ACGTTCAT_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184330_AACGTGTG_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184333_ATCCTAGG_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184334_ATCAACCG_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184335_AGGTCACG_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184345_AATCCTGA_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184349_CGGAAACA_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184350_AATGAATT_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184351_TAGGACCC_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184353_CATGGGAA_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184362_GCTGGACA_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184374_TACCGCAA_L004_17480_1     1   0.000      0.991 1.00 0.00
#> lane4_3600STDY6184375_TATCTCCT_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184376_TGTCATCT_L004_17480_1     2   0.981      0.307 0.42 0.58
#> lane4_3600STDY6184377_ATAGCTCT_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184378_AGTCCAAC_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184379_TTTGGGCA_L004_17480_1     2   0.529      0.873 0.12 0.88
#> lane4_3600STDY6184380_TCTGACGC_L004_17480_1     2   0.469      0.895 0.10 0.90
#> lane4_3600STDY6184381_TGTCGACT_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184382_GTCACGTA_L004_17480_1     1   0.000      0.991 1.00 0.00
#> lane4_3600STDY6184383_TTGAGCGA_L004_17480_1     1   0.000      0.991 1.00 0.00
#> lane4_3600STDY6184384_GAGACATA_L004_17480_1     2   0.469      0.895 0.10 0.90
#> lane4_3600STDY6184385_GTCAAGCT_L004_17480_1     1   0.000      0.991 1.00 0.00
#> lane4_3600STDY6184386_AGCAAGTT_L004_17480_1     1   0.000      0.991 1.00 0.00
#> lane4_3600STDY6184387_GACGCTCA_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184393_CCAGCTTA_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184394_GAATCCTA_L004_17480_1     2   0.141      0.969 0.02 0.98
#> lane4_3600STDY6184395_ACTTCGTA_L004_17480_1     2   0.141      0.969 0.02 0.98
#> lane4_3600STDY6184396_TAGTCGGT_L004_17480_1     2   0.469      0.895 0.10 0.90
#> lane4_3600STDY6184397_CGCACGAG_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184398_ACGTACTA_L004_17480_1     1   0.000      0.991 1.00 0.00
#> lane4_3600STDY6184399_AGCGCCAA_L004_17480_1     2   0.469      0.895 0.10 0.90
#> lane4_3600STDY6184400_GCCTGCCC_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184402_CTTGACCG_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184404_CGAGATCC_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184405_ATTAGCGG_L004_17480_1     1   0.000      0.991 1.00 0.00
#> lane4_3600STDY6184406_GCGCTGAT_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184407_TGCTGAAC_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184409_GTTTTCAC_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184410_GAGATGCC_L004_17480_1     2   0.722      0.769 0.20 0.80
#> lane4_3600STDY6184411_TTGAGAAG_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184417_TTCCTACA_L004_17480_1     2   0.529      0.873 0.12 0.88
#> lane4_3600STDY6184420_AAATACTC_L004_17480_1     1   0.000      0.991 1.00 0.00
#> lane4_3600STDY6184421_CACCCGTC_L004_17480_1     2   0.402      0.914 0.08 0.92
#> lane4_3600STDY6184422_TCGTGGTT_L004_17480_1     2   0.469      0.895 0.10 0.90
#> lane4_3600STDY6184423_ACTTGGGG_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184424_GGCTGCTT_L004_17480_1     2   0.760      0.739 0.22 0.78
#> lane4_3600STDY6184425_CAGGGTCG_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184427_TCTACAGT_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184428_CTTCTAGA_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184429_AACGGCTT_L004_17480_1     1   0.000      0.991 1.00 0.00
#> lane4_3600STDY6184430_ATAAGACT_L004_17480_1     1   0.000      0.991 1.00 0.00
#> lane4_3600STDY6184431_GTTTTTCG_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184432_ATTGGTAT_L004_17480_1     1   0.000      0.991 1.00 0.00
#> lane4_3600STDY6184434_AAGCCGAA_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184436_ATTGCACA_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184441_TCCTCCGA_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184443_GATTCTAT_L004_17480_1     2   0.469      0.895 0.10 0.90
#> lane4_3600STDY6184444_ATGCAAAG_L004_17480_1     1   0.000      0.991 1.00 0.00
#> lane4_3600STDY6184451_GATCGAAC_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184452_GTATAGGG_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184453_GGTAAGAG_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184454_AGTCCGAT_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184458_GTGTCTGA_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184468_ATGCGTCG_L004_17480_1     2   0.469      0.895 0.10 0.90
#> lane4_3600STDY6184469_TTCTTAGC_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184470_TGAGTAAG_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184472_TCGATGCG_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184476_AGGTATCC_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184477_AGGATCTC_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184478_CTGTTTGA_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184479_GGAATTTC_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184481_AAGGTCTG_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184482_AATTAGGC_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184485_CTTATTCC_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184492_GCCGAACC_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184493_ACTTTACT_L004_17480_1     2   0.634      0.825 0.16 0.84
#> lane4_3600STDY6184494_GGGTCCAT_L004_17480_1     2   0.141      0.969 0.02 0.98
#> lane4_3600STDY6184495_ATAACTAG_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184496_AATAGAGA_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184497_TCACCATT_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184499_GCGTGAAC_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184506_TATACATC_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184513_GGACACGG_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184516_CGAATCGA_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184517_TAACAACT_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184518_AGCTCTTT_L004_17480_1     2   0.141      0.969 0.02 0.98
#> lane4_3600STDY6184519_TAATCCCT_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184520_AGGACACT_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184521_TTACACTA_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184525_ATCCCCTA_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184526_CATACTAC_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184527_CAATTGTT_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184528_AAACCCGT_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184529_CAGATTTC_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184530_GCGTAGGT_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184531_GGCATTCG_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184537_GGGGACTA_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184540_TAATCAAC_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184547_GCTTAAAC_L004_17480_1     2   0.469      0.895 0.10 0.90
#> lane4_3600STDY6184549_GTATCGTC_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184550_GTCCTCAC_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184554_AGCAACGA_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184556_CGACCCTT_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184559_AACTTATC_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane4_3600STDY6184561_TTACTACC_L004_17480_1     2   0.000      0.985 0.00 1.00
#> lane1_3600STDY6183798_CGATGTTT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183799_TTAGGCAT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183800_TGACCACT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183801_ACAGTGGT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183802_GCCAATGT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183803_CAGATCTG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183804_ACTTGATG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183805_GATCAGCG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183806_TAGCTTGT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183807_GGCTACAG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183809_TGGTTGTT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183811_TAAGCGTT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183812_TCCGTCTT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183813_TGTACCTT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183814_TTCTGTGT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183815_TCTGCTGT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183817_TCGAGCGT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183818_TGATACGT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183819_TGCATAGT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183821_TGCGATCT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183822_TTCCTGCT_L001_17592_1     2   0.000      0.985 0.00 1.00
#> lane1_3600STDY6183823_TAGTGACT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183824_TACAGGAT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183825_TCCTCAAT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183826_TGTGGTTG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183827_TAGTCTTG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183828_TTCCATTG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183829_TCGAAGTG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183830_TAACGCTG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183831_TTGGTATG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183832_TGAACTGG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183833_TACTTCGG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183834_TCTCACGG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183835_TCAGGAGG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183836_TAAGTTCG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183837_TCCAGTCG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183838_TGTATGCG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183840_TGGCTCAG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183842_TCAGATTC_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183843_TACTAGTC_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183844_TTCAGCTC_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183845_TGTCTATC_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183846_TATGTGGC_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183847_TTACTCGC_L001_17592_1     1   0.402      0.913 0.92 0.08
#> lane1_3600STDY6183848_TCGTTAGC_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183849_TACCGAGC_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183850_TGTTCTCC_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183851_TTCGCACC_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183852_TTGCGTAC_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183853_TCTACGAC_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183854_TGACAGAC_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183855_TAGAACAC_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183856_TCATCCTA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183858_TAGACGGA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183859_TGTGAAGA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183860_TCTCTTCA_L001_17592_1     1   0.469      0.892 0.90 0.10
#> lane1_3600STDY6183861_TTGTTCCA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183862_TGAAGCCA_L001_17592_1     2   0.000      0.985 0.00 1.00
#> lane1_3600STDY6183863_TACCACCA_L001_17592_1     2   0.000      0.985 0.00 1.00
#> lane1_3600STDY6183866_GATCTCTT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183867_GTGTCCTT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183868_GACGGATT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183869_GCAACATT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183870_GGTCGTGT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183871_GAATCTGT_L001_17592_1     2   0.000      0.985 0.00 1.00
#> lane1_3600STDY6183872_GTACATCT_L001_17592_1     1   0.469      0.892 0.90 0.10
#> lane1_3600STDY6183873_GAGGTGCT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183875_GTTAGCCT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183876_GTCGCTAT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183877_GGAATGAT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183878_GAGCCAAT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183879_GCTCCTTG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183880_GTAAGGTG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183883_GGATTAGG_L001_17592_1     1   0.469      0.892 0.90 0.10
#> lane1_3600STDY6183890_GCTAACTC_L001_17592_1     1   0.469      0.892 0.90 0.10
#> lane1_3600STDY6183892_GTCTTGGC_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183893_GTAGAAGC_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183894_GATGGTCC_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183895_GTGCTACC_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183896_GCGATTAC_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183897_GGTTGGAC_L001_17592_1     1   0.469      0.892 0.90 0.10
#> lane1_3600STDY6183899_GACACTTA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183900_GTGCAGTA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183901_GGAGTCTA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183902_GCTATGGA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183903_GAGTGCGA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183904_GTAACCGA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183906_GCCTTACA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183907_GAACGACA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183915_CAAGACCT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183916_CACACACT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183917_CCTAGTAT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183918_CCACCGAT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183919_CTTCACAT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183920_CTATCATG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183921_CATGAATG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183922_CCACTTGG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183923_CTGTACGG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183924_CTAGATAG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183925_CACTCGAG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183926_CCGACAAG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183930_CGCTAAGC_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183931_CAACCTCC_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183935_CCATGCAC_L001_17592_1     2   0.000      0.985 0.00 1.00
#> lane1_3600STDY6183936_CGTTACTA_L001_17592_1     2   0.000      0.985 0.00 1.00
#> lane1_3600STDY6183937_CAAGTAGA_L001_17592_1     1   0.469      0.892 0.90 0.10
#> lane1_3600STDY6183938_CTCTCTCA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183939_CGACTGCA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183940_CCTGAGCA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183941_CAGGCTAA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183942_CGGAGGAA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183943_AGGAGATT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183945_ACGTTCAT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183946_AACGTGTG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183947_AGACCGTG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183948_ACCTCTGG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183949_ATCCTAGG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183950_ATCAACCG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183951_AGGTCACG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183954_ATTCGGAG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183955_ACGCAATC_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183961_AATCCTGA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183962_AGGATTCA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183963_AACTGGCA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183966_AATGAATT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183967_TAGGACCC_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183968_TCTCAGTG_L001_17592_1     2   0.000      0.985 0.00 1.00
#> lane1_3600STDY6183969_CATGGGAA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183971_CTCAGATA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183972_CCCATAGG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183973_GCTATGAC_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183974_GCTGTGAA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183990_TACCGCAA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183991_TATCTCCT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6183995_TTTGGGCA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184000_GAGACATA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184002_AGCAAGTT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184003_GACGCTCA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184004_ACGGCAGC_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184005_AGAACTGA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184006_CGCCTTTG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184007_TAAGGTCA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184008_ACGTTGGC_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184009_CCAGCTTA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184010_GAATCCTA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184012_TAGTCGGT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184013_CGCACGAG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184015_AGCGCCAA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184017_AGGACGAT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184021_ATTAGCGG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184024_GAGGGCAG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184025_GTTTTCAC_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184026_GAGATGCC_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184027_TTGAGAAG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184028_GCATCCGG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184029_GTCACCAG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184030_GAGGTCGC_L001_17592_1     2   0.000      0.985 0.00 1.00
#> lane1_3600STDY6184031_AAGGGGTA_L001_17592_1     1   0.469      0.892 0.90 0.10
#> lane1_3600STDY6184032_TTTTACGT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184033_TTCCTACA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184035_GTGGCCAA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184036_AAATACTC_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184037_CACCCGTC_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184038_TCGTGGTT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184041_CAGGGTCG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184045_AACGGCTT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184048_ATTGGTAT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184049_CGCCAGTA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184050_AAGCCGAA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184052_ATTGCACA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184053_CTTTTGAT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184054_TAGCGAGA_L001_17592_1     2   0.000      0.985 0.00 1.00
#> lane1_3600STDY6184055_TTCGCAGG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184056_TAGTTATT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184057_TCCTCCGA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184059_GATTCTAT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184060_ATGCAAAG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184069_GGTAAGAG_L001_17592_1     2   0.000      0.985 0.00 1.00
#> lane1_3600STDY6184072_TGAGACTC_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184073_ACTCAGGA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184074_GTGTCTGA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184075_CTTGAATC_L001_17592_1     2   0.000      0.985 0.00 1.00
#> lane1_3600STDY6184076_CCGCATGA_L001_17592_1     2   0.000      0.985 0.00 1.00
#> lane1_3600STDY6184077_AAGTAACA_L001_17592_1     1   0.469      0.892 0.90 0.10
#> lane1_3600STDY6184080_TTACCTTC_L001_17592_1     2   0.000      0.985 0.00 1.00
#> lane1_3600STDY6184083_TCGGACCG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184084_ATGCGTCG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184093_AGGATCTC_L001_17592_1     1   0.469      0.892 0.90 0.10
#> lane1_3600STDY6184096_TTGGAGCA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184097_AAGGTCTG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184098_AATTAGGC_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184099_AATCGGGT_L001_17592_1     1   0.402      0.913 0.92 0.08
#> lane1_3600STDY6184100_AGGTAGAC_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184101_CTTATTCC_L001_17592_1     1   0.402      0.913 0.92 0.08
#> lane1_3600STDY6184107_GTCCGTGA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184108_GCCGAACC_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184109_ACTTTACT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184110_GGGTCCAT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184117_GGTGTCGA_L001_17592_1     1   0.760      0.731 0.78 0.22
#> lane1_3600STDY6184118_CCGTTAGG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184120_CCTACCCG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184121_AACAGCGC_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184122_TATACATC_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184123_AAGCGACT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184124_GAAGCGCA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184125_ACCTCTAC_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184127_GCTGGTTG_L001_17592_1     1   0.242      0.954 0.96 0.04
#> lane1_3600STDY6184128_ATCGTCCT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184129_GGACACGG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184131_CTTCGGCT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184133_TAACAACT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184137_TTACACTA_L001_17592_1     1   0.327      0.934 0.94 0.06
#> lane1_3600STDY6184139_CCATAGCT_L001_17592_1     1   0.402      0.913 0.92 0.08
#> lane1_3600STDY6184142_CATACTAC_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184145_CAGATTTC_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184146_GCGTAGGT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184147_GGCATTCG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184148_TGGGGCTT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184149_CTGACTAC_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184150_AACTTTTA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184152_CCGAGTAG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184153_GGGGACTA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184155_AGCTCATC_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184157_ACTGGTCG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184159_AGCGATGA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184161_CGTATGCA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184162_CACGTGCG_L001_17592_1     1   0.855      0.626 0.72 0.28
#> lane1_3600STDY6184165_GTATCGTC_L001_17592_1     2   0.760      0.721 0.22 0.78
#> lane1_3600STDY6184166_GTCCTCAC_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184168_CATTTTGC_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184169_TCCTCTCT_L001_17592_1     2   0.000      0.985 0.00 1.00
#> lane1_3600STDY6184171_ACAGAAGA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184172_CGACCCTT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184173_CTGCCTAG_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184174_GAGCGCAT_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184175_AACTTATC_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184176_CCGATGTA_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184177_TTACTACC_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184178_CAAGGAGC_L001_17592_1     1   0.000      0.991 1.00 0.00
#> lane1_3600STDY6184179_TGGTTGAC_L001_17592_1     1   0.000      0.991 1.00 0.00

show/hide code output

cbind(get_classes(res, k = 3), get_membership(res, k = 3))
#>                                             class entropy silhouette   p1   p2   p3
#> lane3_3600STDY6078002_TCATTGAG_L003_15987_1     3  0.6192     0.3969 0.00 0.42 0.58
#> lane1_3600STDY6167695_TTAGGCAT_L001_17236_1     3  0.6192     0.3969 0.00 0.42 0.58
#> lane1_3600STDY6167704_CTTGTACT_L001_17236_1     3  0.6280     0.2979 0.00 0.46 0.54
#> lane1_3600STDY6167719_TAGTGACT_L001_17236_1     3  0.6192     0.3969 0.00 0.42 0.58
#> lane1_3600STDY6167720_TACAGGAT_L001_17236_1     3  0.6192     0.3969 0.00 0.42 0.58
#> lane1_3600STDY6167721_TCCTCAAT_L001_17236_1     3  0.6192     0.3969 0.00 0.42 0.58
#> lane1_3600STDY6167745_TACCGAGC_L001_17236_1     3  0.6192     0.3969 0.00 0.42 0.58
#> lane1_3600STDY6167747_TTCGCACC_L001_17236_1     3  0.6192     0.3969 0.00 0.42 0.58
#> lane1_3600STDY6167799_GAGTGCGA_L001_17236_1     3  0.6192     0.3969 0.00 0.42 0.58
#> lane1_3600STDY6167817_CATGAATG_L001_17236_1     3  0.6192     0.3969 0.00 0.42 0.58
#> lane1_3600STDY6167821_CACTCGAG_L001_17236_1     3  0.6192     0.3969 0.00 0.42 0.58
#> lane1_3600STDY6167841_ACGTTCAT_L001_17236_1     3  0.6192     0.3969 0.00 0.42 0.58
#> lane1_3600STDY6167843_AGACCGTG_L001_17236_1     3  0.6192     0.3969 0.00 0.42 0.58
#> lane1_3600STDY6167885_GTAAGATA_L001_17236_1     3  0.6192     0.3969 0.00 0.42 0.58
#> lane1_3600STDY6167887_TATCTCCT_L001_17236_1     3  0.6192     0.3969 0.00 0.42 0.58
#> lane1_3600STDY6167898_AGCAAGTT_L001_17236_1     3  0.6192     0.3969 0.00 0.42 0.58
#> lane1_3600STDY6167900_ACGGCAGC_L001_17236_1     3  0.6192     0.3969 0.00 0.42 0.58
#> lane1_3600STDY6167901_AGAACTGA_L001_17236_1     3  0.6192     0.3969 0.00 0.42 0.58
#> lane1_3600STDY6167926_GAGGTCGC_L001_17236_1     3  0.6192     0.3969 0.00 0.42 0.58
#> lane1_3600STDY6167940_CTTCTAGA_L001_17236_1     3  0.6192     0.3969 0.00 0.42 0.58
#> lane1_3600STDY6167960_TGGGTTGG_L001_17236_1     3  0.6192     0.3969 0.00 0.42 0.58
#> lane1_3600STDY6167970_GTGTCTGA_L001_17236_1     3  0.6192     0.3969 0.00 0.42 0.58
#> lane1_3600STDY6167992_TTGGAGCA_L001_17236_1     3  0.6192     0.3969 0.00 0.42 0.58
#> lane1_3600STDY6167993_AAGGTCTG_L001_17236_1     3  0.6192     0.3969 0.00 0.42 0.58
#> lane1_3600STDY6168005_ACTTTACT_L001_17236_1     3  0.6192     0.3969 0.00 0.42 0.58
#> lane1_3600STDY6168032_AGGACACT_L001_17236_1     3  0.6192     0.3969 0.00 0.42 0.58
#> lane1_3600STDY6168046_AACTTTTA_L001_17236_1     3  0.6192     0.3969 0.00 0.42 0.58
#> lane1_3600STDY6168056_GAAGAGAT_L001_17236_1     3  0.6192     0.3969 0.00 0.42 0.58
#> lane4_3600STDY6184181_ATCACGTT_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184182_CGATGTTT_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184183_TTAGGCAT_L004_17480_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane4_3600STDY6184184_TGACCACT_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184185_ACAGTGGT_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184186_GCCAATGT_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184187_CAGATCTG_L004_17480_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane4_3600STDY6184189_GATCAGCG_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184190_TAGCTTGT_L004_17480_1     2  0.6192     0.3645 0.42 0.58 0.00
#> lane4_3600STDY6184191_GGCTACAG_L004_17480_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane4_3600STDY6184193_TGGTTGTT_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184194_TCTCGGTT_L004_17480_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane4_3600STDY6184195_TAAGCGTT_L004_17480_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane4_3600STDY6184196_TCCGTCTT_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184197_TGTACCTT_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184198_TTCTGTGT_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184201_TCGAGCGT_L004_17480_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane4_3600STDY6184202_TGATACGT_L004_17480_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane4_3600STDY6184203_TGCATAGT_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184204_TTGACTCT_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184205_TGCGATCT_L004_17480_1     2  0.6244     0.3138 0.44 0.56 0.00
#> lane4_3600STDY6184206_TTCCTGCT_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184207_TAGTGACT_L004_17480_1     2  0.6192     0.3645 0.42 0.58 0.00
#> lane4_3600STDY6184209_TCCTCAAT_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184210_TGTGGTTG_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184214_TAACGCTG_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184218_TCTCACGG_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184220_TAAGTTCG_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184221_TCCAGTCG_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184225_TATGCCAG_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184226_TCAGATTC_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184228_TTCAGCTC_L004_17480_1     2  0.6192     0.3645 0.42 0.58 0.00
#> lane4_3600STDY6184229_TGTCTATC_L004_17480_1     2  0.6192     0.3645 0.42 0.58 0.00
#> lane4_3600STDY6184232_TCGTTAGC_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184233_TACCGAGC_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184235_TTCGCACC_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184236_TTGCGTAC_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184237_TCTACGAC_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184241_TGCTGATA_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184242_TAGACGGA_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184243_TGTGAAGA_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184245_TTGTTCCA_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184249_GGTGAGTT_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184250_GATCTCTT_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184251_GTGTCCTT_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184252_GACGGATT_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184253_GCAACATT_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184255_GAATCTGT_L004_17480_1     2  0.5948     0.2841 0.00 0.64 0.36
#> lane4_3600STDY6184266_GTTGTCGG_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184269_GTGTGTCG_L004_17480_1     2  0.6045     0.2275 0.00 0.62 0.38
#> lane4_3600STDY6184274_GCTAACTC_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184276_GTCTTGGC_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184277_GTAGAAGC_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184278_GATGGTCC_L004_17480_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane4_3600STDY6184279_GTGCTACC_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184281_GGTTGGAC_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184284_GTGCAGTA_L004_17480_1     2  0.6126     0.1644 0.00 0.60 0.40
#> lane4_3600STDY6184289_GGCAAGCA_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184291_GAACGACA_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184292_GCAGGTAA_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184293_GCGTCGAA_L004_17480_1     2  0.6045     0.2275 0.00 0.62 0.38
#> lane4_3600STDY6184296_CTGCGAGT_L004_17480_1     3  0.6302     0.2416 0.00 0.48 0.52
#> lane4_3600STDY6184298_CGCTTCCT_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184300_CACACACT_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184301_CCTAGTAT_L004_17480_1     2  0.6126     0.4067 0.40 0.60 0.00
#> lane4_3600STDY6184302_CCACCGAT_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184303_CTTCACAT_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184304_CTATCATG_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184305_CATGAATG_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184308_CTAGATAG_L004_17480_1     2  0.6045     0.2275 0.00 0.62 0.38
#> lane4_3600STDY6184310_CCGACAAG_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184315_CAACCTCC_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184316_CAGCTGAC_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184320_CGTTACTA_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184325_CAGGCTAA_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184327_AGGAGATT_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184329_ACGTTCAT_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184330_AACGTGTG_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184333_ATCCTAGG_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184334_ATCAACCG_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184335_AGGTCACG_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184345_AATCCTGA_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184349_CGGAAACA_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184350_AATGAATT_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184351_TAGGACCC_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184353_CATGGGAA_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184362_GCTGGACA_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184374_TACCGCAA_L004_17480_1     1  0.2537     0.8420 0.92 0.08 0.00
#> lane4_3600STDY6184375_TATCTCCT_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184376_TGTCATCT_L004_17480_1     2  0.6192     0.3645 0.42 0.58 0.00
#> lane4_3600STDY6184377_ATAGCTCT_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184378_AGTCCAAC_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184379_TTTGGGCA_L004_17480_1     2  0.6192     0.3645 0.42 0.58 0.00
#> lane4_3600STDY6184380_TCTGACGC_L004_17480_1     2  0.6192     0.3645 0.42 0.58 0.00
#> lane4_3600STDY6184381_TGTCGACT_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184382_GTCACGTA_L004_17480_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane4_3600STDY6184383_TTGAGCGA_L004_17480_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane4_3600STDY6184384_GAGACATA_L004_17480_1     2  0.6192     0.3645 0.42 0.58 0.00
#> lane4_3600STDY6184385_GTCAAGCT_L004_17480_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane4_3600STDY6184386_AGCAAGTT_L004_17480_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane4_3600STDY6184387_GACGCTCA_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184393_CCAGCTTA_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184394_GAATCCTA_L004_17480_1     2  0.0892     0.8789 0.02 0.98 0.00
#> lane4_3600STDY6184395_ACTTCGTA_L004_17480_1     2  0.2066     0.8379 0.06 0.94 0.00
#> lane4_3600STDY6184396_TAGTCGGT_L004_17480_1     2  0.6192     0.3645 0.42 0.58 0.00
#> lane4_3600STDY6184397_CGCACGAG_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184398_ACGTACTA_L004_17480_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane4_3600STDY6184399_AGCGCCAA_L004_17480_1     2  0.6192     0.3645 0.42 0.58 0.00
#> lane4_3600STDY6184400_GCCTGCCC_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184402_CTTGACCG_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184404_CGAGATCC_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184405_ATTAGCGG_L004_17480_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane4_3600STDY6184406_GCGCTGAT_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184407_TGCTGAAC_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184409_GTTTTCAC_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184410_GAGATGCC_L004_17480_1     2  0.6192     0.3645 0.42 0.58 0.00
#> lane4_3600STDY6184411_TTGAGAAG_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184417_TTCCTACA_L004_17480_1     2  0.6192     0.3645 0.42 0.58 0.00
#> lane4_3600STDY6184420_AAATACTC_L004_17480_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane4_3600STDY6184421_CACCCGTC_L004_17480_1     2  0.6045     0.4458 0.38 0.62 0.00
#> lane4_3600STDY6184422_TCGTGGTT_L004_17480_1     2  0.6192     0.3645 0.42 0.58 0.00
#> lane4_3600STDY6184423_ACTTGGGG_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184424_GGCTGCTT_L004_17480_1     2  0.6192     0.3645 0.42 0.58 0.00
#> lane4_3600STDY6184425_CAGGGTCG_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184427_TCTACAGT_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184428_CTTCTAGA_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184429_AACGGCTT_L004_17480_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane4_3600STDY6184430_ATAAGACT_L004_17480_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane4_3600STDY6184431_GTTTTTCG_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184432_ATTGGTAT_L004_17480_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane4_3600STDY6184434_AAGCCGAA_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184436_ATTGCACA_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184441_TCCTCCGA_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184443_GATTCTAT_L004_17480_1     2  0.6126     0.4067 0.40 0.60 0.00
#> lane4_3600STDY6184444_ATGCAAAG_L004_17480_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane4_3600STDY6184451_GATCGAAC_L004_17480_1     2  0.6192     0.0958 0.00 0.58 0.42
#> lane4_3600STDY6184452_GTATAGGG_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184453_GGTAAGAG_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184454_AGTCCGAT_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184458_GTGTCTGA_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184468_ATGCGTCG_L004_17480_1     2  0.6192     0.3645 0.42 0.58 0.00
#> lane4_3600STDY6184469_TTCTTAGC_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184470_TGAGTAAG_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184472_TCGATGCG_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184476_AGGTATCC_L004_17480_1     2  0.6126     0.1644 0.00 0.60 0.40
#> lane4_3600STDY6184477_AGGATCTC_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184478_CTGTTTGA_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184479_GGAATTTC_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184481_AAGGTCTG_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184482_AATTAGGC_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184485_CTTATTCC_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184492_GCCGAACC_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184493_ACTTTACT_L004_17480_1     2  0.6192     0.3645 0.42 0.58 0.00
#> lane4_3600STDY6184494_GGGTCCAT_L004_17480_1     2  0.4555     0.6823 0.20 0.80 0.00
#> lane4_3600STDY6184495_ATAACTAG_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184496_AATAGAGA_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184497_TCACCATT_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184499_GCGTGAAC_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184506_TATACATC_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184513_GGACACGG_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184516_CGAATCGA_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184517_TAACAACT_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184518_AGCTCTTT_L004_17480_1     2  0.4555     0.6824 0.20 0.80 0.00
#> lane4_3600STDY6184519_TAATCCCT_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184520_AGGACACT_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184521_TTACACTA_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184525_ATCCCCTA_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184526_CATACTAC_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184527_CAATTGTT_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184528_AAACCCGT_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184529_CAGATTTC_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184530_GCGTAGGT_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184531_GGCATTCG_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184537_GGGGACTA_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184540_TAATCAAC_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184547_GCTTAAAC_L004_17480_1     2  0.6192     0.3645 0.42 0.58 0.00
#> lane4_3600STDY6184549_GTATCGTC_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184550_GTCCTCAC_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184554_AGCAACGA_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184556_CGACCCTT_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184559_AACTTATC_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane4_3600STDY6184561_TTACTACC_L004_17480_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane1_3600STDY6183798_CGATGTTT_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183799_TTAGGCAT_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183800_TGACCACT_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183801_ACAGTGGT_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183802_GCCAATGT_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183803_CAGATCTG_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183804_ACTTGATG_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183805_GATCAGCG_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183806_TAGCTTGT_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183807_GGCTACAG_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183809_TGGTTGTT_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183811_TAAGCGTT_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183812_TCCGTCTT_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183813_TGTACCTT_L001_17592_1     3  0.6045     0.2546 0.38 0.00 0.62
#> lane1_3600STDY6183814_TTCTGTGT_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6183815_TCTGCTGT_L001_17592_1     3  0.5948     0.3042 0.36 0.00 0.64
#> lane1_3600STDY6183817_TCGAGCGT_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183818_TGATACGT_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183819_TGCATAGT_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183821_TGCGATCT_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183822_TTCCTGCT_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6183823_TAGTGACT_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183824_TACAGGAT_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183825_TCCTCAAT_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183826_TGTGGTTG_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183827_TAGTCTTG_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183828_TTCCATTG_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183829_TCGAAGTG_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183830_TAACGCTG_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183831_TTGGTATG_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183832_TGAACTGG_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183833_TACTTCGG_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183834_TCTCACGG_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183835_TCAGGAGG_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183836_TAAGTTCG_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183837_TCCAGTCG_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183838_TGTATGCG_L001_17592_1     3  0.5948     0.3042 0.36 0.00 0.64
#> lane1_3600STDY6183840_TGGCTCAG_L001_17592_1     1  0.6192     0.3559 0.58 0.00 0.42
#> lane1_3600STDY6183842_TCAGATTC_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183843_TACTAGTC_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183844_TTCAGCTC_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183845_TGTCTATC_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183846_TATGTGGC_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183847_TTACTCGC_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6183848_TCGTTAGC_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183849_TACCGAGC_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183850_TGTTCTCC_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183851_TTCGCACC_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183852_TTGCGTAC_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183853_TCTACGAC_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183854_TGACAGAC_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183855_TAGAACAC_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183856_TCATCCTA_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183858_TAGACGGA_L001_17592_1     1  0.6192     0.3559 0.58 0.00 0.42
#> lane1_3600STDY6183859_TGTGAAGA_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6183860_TCTCTTCA_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6183861_TTGTTCCA_L001_17592_1     1  0.6192     0.3559 0.58 0.00 0.42
#> lane1_3600STDY6183862_TGAAGCCA_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6183863_TACCACCA_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6183866_GATCTCTT_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183867_GTGTCCTT_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183868_GACGGATT_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6183869_GCAACATT_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183870_GGTCGTGT_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183871_GAATCTGT_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6183872_GTACATCT_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6183873_GAGGTGCT_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183875_GTTAGCCT_L001_17592_1     1  0.6192     0.3559 0.58 0.00 0.42
#> lane1_3600STDY6183876_GTCGCTAT_L001_17592_1     1  0.6192     0.3559 0.58 0.00 0.42
#> lane1_3600STDY6183877_GGAATGAT_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183878_GAGCCAAT_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183879_GCTCCTTG_L001_17592_1     3  0.5835     0.3496 0.34 0.00 0.66
#> lane1_3600STDY6183880_GTAAGGTG_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183883_GGATTAGG_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6183890_GCTAACTC_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6183892_GTCTTGGC_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6183893_GTAGAAGC_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183894_GATGGTCC_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183895_GTGCTACC_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6183896_GCGATTAC_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6183897_GGTTGGAC_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6183899_GACACTTA_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6183900_GTGCAGTA_L001_17592_1     3  0.6192     0.1346 0.42 0.00 0.58
#> lane1_3600STDY6183901_GGAGTCTA_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183902_GCTATGGA_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183903_GAGTGCGA_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6183904_GTAACCGA_L001_17592_1     1  0.6192     0.3559 0.58 0.00 0.42
#> lane1_3600STDY6183906_GCCTTACA_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6183907_GAACGACA_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6183915_CAAGACCT_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6183916_CACACACT_L001_17592_1     1  0.6192     0.3559 0.58 0.00 0.42
#> lane1_3600STDY6183917_CCTAGTAT_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183918_CCACCGAT_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183919_CTTCACAT_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6183920_CTATCATG_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183921_CATGAATG_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183922_CCACTTGG_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6183923_CTGTACGG_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183924_CTAGATAG_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6183925_CACTCGAG_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183926_CCGACAAG_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183930_CGCTAAGC_L001_17592_1     1  0.6192     0.3559 0.58 0.00 0.42
#> lane1_3600STDY6183931_CAACCTCC_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6183935_CCATGCAC_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6183936_CGTTACTA_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6183937_CAAGTAGA_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6183938_CTCTCTCA_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183939_CGACTGCA_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6183940_CCTGAGCA_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183941_CAGGCTAA_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183942_CGGAGGAA_L001_17592_1     1  0.6244     0.3066 0.56 0.00 0.44
#> lane1_3600STDY6183943_AGGAGATT_L001_17592_1     1  0.3340     0.8173 0.88 0.00 0.12
#> lane1_3600STDY6183945_ACGTTCAT_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6183946_AACGTGTG_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183947_AGACCGTG_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183948_ACCTCTGG_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183949_ATCCTAGG_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183950_ATCAACCG_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183951_AGGTCACG_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183954_ATTCGGAG_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183955_ACGCAATC_L001_17592_1     3  0.2066     0.7583 0.06 0.00 0.94
#> lane1_3600STDY6183961_AATCCTGA_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6183962_AGGATTCA_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6183963_AACTGGCA_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6183966_AATGAATT_L001_17592_1     1  0.6192     0.3559 0.58 0.00 0.42
#> lane1_3600STDY6183967_TAGGACCC_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183968_TCTCAGTG_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6183969_CATGGGAA_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183971_CTCAGATA_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183972_CCCATAGG_L001_17592_1     1  0.6192     0.3559 0.58 0.00 0.42
#> lane1_3600STDY6183973_GCTATGAC_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183974_GCTGTGAA_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183990_TACCGCAA_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183991_TATCTCCT_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6183995_TTTGGGCA_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184000_GAGACATA_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184002_AGCAAGTT_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184003_GACGCTCA_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184004_ACGGCAGC_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184005_AGAACTGA_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184006_CGCCTTTG_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184007_TAAGGTCA_L001_17592_1     1  0.6192     0.3559 0.58 0.00 0.42
#> lane1_3600STDY6184008_ACGTTGGC_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184009_CCAGCTTA_L001_17592_1     1  0.4796     0.6936 0.78 0.00 0.22
#> lane1_3600STDY6184010_GAATCCTA_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184012_TAGTCGGT_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184013_CGCACGAG_L001_17592_1     3  0.6309    -0.1427 0.50 0.00 0.50
#> lane1_3600STDY6184015_AGCGCCAA_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184017_AGGACGAT_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184021_ATTAGCGG_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184024_GAGGGCAG_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184025_GTTTTCAC_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184026_GAGATGCC_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184027_TTGAGAAG_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184028_GCATCCGG_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184029_GTCACCAG_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184030_GAGGTCGC_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6184031_AAGGGGTA_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6184032_TTTTACGT_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184033_TTCCTACA_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184035_GTGGCCAA_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184036_AAATACTC_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184037_CACCCGTC_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184038_TCGTGGTT_L001_17592_1     3  0.6045     0.2546 0.38 0.00 0.62
#> lane1_3600STDY6184041_CAGGGTCG_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6184045_AACGGCTT_L001_17592_1     1  0.2959     0.8388 0.90 0.00 0.10
#> lane1_3600STDY6184048_ATTGGTAT_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184049_CGCCAGTA_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184050_AAGCCGAA_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184052_ATTGCACA_L001_17592_1     1  0.6192     0.3559 0.58 0.00 0.42
#> lane1_3600STDY6184053_CTTTTGAT_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184054_TAGCGAGA_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6184055_TTCGCAGG_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184056_TAGTTATT_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6184057_TCCTCCGA_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184059_GATTCTAT_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184060_ATGCAAAG_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184069_GGTAAGAG_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6184072_TGAGACTC_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6184073_ACTCAGGA_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6184074_GTGTCTGA_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184075_CTTGAATC_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6184076_CCGCATGA_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6184077_AAGTAACA_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6184080_TTACCTTC_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6184083_TCGGACCG_L001_17592_1     3  0.6045     0.2546 0.38 0.00 0.62
#> lane1_3600STDY6184084_ATGCGTCG_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184093_AGGATCTC_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6184096_TTGGAGCA_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184097_AAGGTCTG_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184098_AATTAGGC_L001_17592_1     1  0.6192     0.3559 0.58 0.00 0.42
#> lane1_3600STDY6184099_AATCGGGT_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6184100_AGGTAGAC_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6184101_CTTATTCC_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6184107_GTCCGTGA_L001_17592_1     3  0.6045     0.2546 0.38 0.00 0.62
#> lane1_3600STDY6184108_GCCGAACC_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184109_ACTTTACT_L001_17592_1     1  0.6192     0.3559 0.58 0.00 0.42
#> lane1_3600STDY6184110_GGGTCCAT_L001_17592_1     1  0.0892     0.9164 0.98 0.00 0.02
#> lane1_3600STDY6184117_GGTGTCGA_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6184118_CCGTTAGG_L001_17592_1     1  0.6244     0.3066 0.56 0.00 0.44
#> lane1_3600STDY6184120_CCTACCCG_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184121_AACAGCGC_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184122_TATACATC_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184123_AAGCGACT_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6184124_GAAGCGCA_L001_17592_1     3  0.5706     0.3915 0.32 0.00 0.68
#> lane1_3600STDY6184125_ACCTCTAC_L001_17592_1     1  0.6192     0.3559 0.58 0.00 0.42
#> lane1_3600STDY6184127_GCTGGTTG_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6184128_ATCGTCCT_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184129_GGACACGG_L001_17592_1     1  0.6192     0.3559 0.58 0.00 0.42
#> lane1_3600STDY6184131_CTTCGGCT_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184133_TAACAACT_L001_17592_1     1  0.6192     0.3559 0.58 0.00 0.42
#> lane1_3600STDY6184137_TTACACTA_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6184139_CCATAGCT_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6184142_CATACTAC_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6184145_CAGATTTC_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184146_GCGTAGGT_L001_17592_1     1  0.5706     0.5414 0.68 0.00 0.32
#> lane1_3600STDY6184147_GGCATTCG_L001_17592_1     3  0.6045     0.2546 0.38 0.00 0.62
#> lane1_3600STDY6184148_TGGGGCTT_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6184149_CTGACTAC_L001_17592_1     1  0.6244     0.3066 0.56 0.00 0.44
#> lane1_3600STDY6184150_AACTTTTA_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6184152_CCGAGTAG_L001_17592_1     1  0.6192     0.3559 0.58 0.00 0.42
#> lane1_3600STDY6184153_GGGGACTA_L001_17592_1     1  0.6192     0.3559 0.58 0.00 0.42
#> lane1_3600STDY6184155_AGCTCATC_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184157_ACTGGTCG_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184159_AGCGATGA_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6184161_CGTATGCA_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6184162_CACGTGCG_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6184165_GTATCGTC_L001_17592_1     3  0.0000     0.8034 0.00 0.00 1.00
#> lane1_3600STDY6184166_GTCCTCAC_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184168_CATTTTGC_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184169_TCCTCTCT_L001_17592_1     2  0.0000     0.8986 0.00 1.00 0.00
#> lane1_3600STDY6184171_ACAGAAGA_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184172_CGACCCTT_L001_17592_1     1  0.6192     0.3559 0.58 0.00 0.42
#> lane1_3600STDY6184173_CTGCCTAG_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184174_GAGCGCAT_L001_17592_1     3  0.6045     0.2546 0.38 0.00 0.62
#> lane1_3600STDY6184175_AACTTATC_L001_17592_1     3  0.6045     0.2546 0.38 0.00 0.62
#> lane1_3600STDY6184176_CCGATGTA_L001_17592_1     3  0.6045     0.2546 0.38 0.00 0.62
#> lane1_3600STDY6184177_TTACTACC_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184178_CAAGGAGC_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00
#> lane1_3600STDY6184179_TGGTTGAC_L001_17592_1     1  0.0000     0.9338 1.00 0.00 0.00

show/hide code output

cbind(get_classes(res, k = 4), get_membership(res, k = 4))
#>                                             class entropy silhouette   p1   p2   p3   p4
#> lane3_3600STDY6078002_TCATTGAG_L003_15987_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane1_3600STDY6167695_TTAGGCAT_L001_17236_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane1_3600STDY6167704_CTTGTACT_L001_17236_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane1_3600STDY6167719_TAGTGACT_L001_17236_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane1_3600STDY6167720_TACAGGAT_L001_17236_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane1_3600STDY6167721_TCCTCAAT_L001_17236_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane1_3600STDY6167745_TACCGAGC_L001_17236_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane1_3600STDY6167747_TTCGCACC_L001_17236_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane1_3600STDY6167799_GAGTGCGA_L001_17236_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane1_3600STDY6167817_CATGAATG_L001_17236_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane1_3600STDY6167821_CACTCGAG_L001_17236_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane1_3600STDY6167841_ACGTTCAT_L001_17236_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane1_3600STDY6167843_AGACCGTG_L001_17236_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane1_3600STDY6167885_GTAAGATA_L001_17236_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane1_3600STDY6167887_TATCTCCT_L001_17236_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane1_3600STDY6167898_AGCAAGTT_L001_17236_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane1_3600STDY6167900_ACGGCAGC_L001_17236_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane1_3600STDY6167901_AGAACTGA_L001_17236_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane1_3600STDY6167926_GAGGTCGC_L001_17236_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane1_3600STDY6167940_CTTCTAGA_L001_17236_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane1_3600STDY6167960_TGGGTTGG_L001_17236_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane1_3600STDY6167970_GTGTCTGA_L001_17236_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane1_3600STDY6167992_TTGGAGCA_L001_17236_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane1_3600STDY6167993_AAGGTCTG_L001_17236_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane1_3600STDY6168005_ACTTTACT_L001_17236_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane1_3600STDY6168032_AGGACACT_L001_17236_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane1_3600STDY6168046_AACTTTTA_L001_17236_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane1_3600STDY6168056_GAAGAGAT_L001_17236_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184181_ATCACGTT_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184182_CGATGTTT_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184183_TTAGGCAT_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184184_TGACCACT_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184185_ACAGTGGT_L004_17480_1     2  0.4977    0.16101 0.00 0.54 0.00 0.46
#> lane4_3600STDY6184186_GCCAATGT_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184187_CAGATCTG_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184189_GATCAGCG_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184190_TAGCTTGT_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184191_GGCTACAG_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184193_TGGTTGTT_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184194_TCTCGGTT_L004_17480_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184195_TAAGCGTT_L004_17480_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184196_TCCGTCTT_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184197_TGTACCTT_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184198_TTCTGTGT_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184201_TCGAGCGT_L004_17480_1     1  0.4907    0.27365 0.58 0.42 0.00 0.00
#> lane4_3600STDY6184202_TGATACGT_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184203_TGCATAGT_L004_17480_1     2  0.4624    0.49394 0.00 0.66 0.00 0.34
#> lane4_3600STDY6184204_TTGACTCT_L004_17480_1     2  0.1211    0.94614 0.00 0.96 0.00 0.04
#> lane4_3600STDY6184205_TGCGATCT_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184206_TTCCTGCT_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184207_TAGTGACT_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184209_TCCTCAAT_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184210_TGTGGTTG_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184214_TAACGCTG_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184218_TCTCACGG_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184220_TAAGTTCG_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184221_TCCAGTCG_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184225_TATGCCAG_L004_17480_1     2  0.2647    0.85791 0.00 0.88 0.00 0.12
#> lane4_3600STDY6184226_TCAGATTC_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184228_TTCAGCTC_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184229_TGTCTATC_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184232_TCGTTAGC_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184233_TACCGAGC_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184235_TTCGCACC_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184236_TTGCGTAC_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184237_TCTACGAC_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184241_TGCTGATA_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184242_TAGACGGA_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184243_TGTGAAGA_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184245_TTGTTCCA_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184249_GGTGAGTT_L004_17480_1     4  0.1637    0.93434 0.00 0.06 0.00 0.94
#> lane4_3600STDY6184250_GATCTCTT_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184251_GTGTCCTT_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184252_GACGGATT_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184253_GCAACATT_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184255_GAATCTGT_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184266_GTTGTCGG_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184269_GTGTGTCG_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184274_GCTAACTC_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184276_GTCTTGGC_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184277_GTAGAAGC_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184278_GATGGTCC_L004_17480_1     2  0.3975    0.67911 0.24 0.76 0.00 0.00
#> lane4_3600STDY6184279_GTGCTACC_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184281_GGTTGGAC_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184284_GTGCAGTA_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184289_GGCAAGCA_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184291_GAACGACA_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184292_GCAGGTAA_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184293_GCGTCGAA_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184296_CTGCGAGT_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184298_CGCTTCCT_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184300_CACACACT_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184301_CCTAGTAT_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184302_CCACCGAT_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184303_CTTCACAT_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184304_CTATCATG_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184305_CATGAATG_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184308_CTAGATAG_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184310_CCGACAAG_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184315_CAACCTCC_L004_17480_1     2  0.0707    0.96477 0.00 0.98 0.00 0.02
#> lane4_3600STDY6184316_CAGCTGAC_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184320_CGTTACTA_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184325_CAGGCTAA_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184327_AGGAGATT_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184329_ACGTTCAT_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184330_AACGTGTG_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184333_ATCCTAGG_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184334_ATCAACCG_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184335_AGGTCACG_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184345_AATCCTGA_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184349_CGGAAACA_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184350_AATGAATT_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184351_TAGGACCC_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184353_CATGGGAA_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184362_GCTGGACA_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184374_TACCGCAA_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184375_TATCTCCT_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184376_TGTCATCT_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184377_ATAGCTCT_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184378_AGTCCAAC_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184379_TTTGGGCA_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184380_TCTGACGC_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184381_TGTCGACT_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184382_GTCACGTA_L004_17480_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane4_3600STDY6184383_TTGAGCGA_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184384_GAGACATA_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184385_GTCAAGCT_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184386_AGCAAGTT_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184387_GACGCTCA_L004_17480_1     4  0.0707    0.97692 0.00 0.02 0.00 0.98
#> lane4_3600STDY6184393_CCAGCTTA_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184394_GAATCCTA_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184395_ACTTCGTA_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184396_TAGTCGGT_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184397_CGCACGAG_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184398_ACGTACTA_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184399_AGCGCCAA_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184400_GCCTGCCC_L004_17480_1     2  0.1637    0.92603 0.00 0.94 0.00 0.06
#> lane4_3600STDY6184402_CTTGACCG_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184404_CGAGATCC_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184405_ATTAGCGG_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184406_GCGCTGAT_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184407_TGCTGAAC_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184409_GTTTTCAC_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184410_GAGATGCC_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184411_TTGAGAAG_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184417_TTCCTACA_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184420_AAATACTC_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184421_CACCCGTC_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184422_TCGTGGTT_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184423_ACTTGGGG_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184424_GGCTGCTT_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184425_CAGGGTCG_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184427_TCTACAGT_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184428_CTTCTAGA_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184429_AACGGCTT_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184430_ATAAGACT_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184431_GTTTTTCG_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184432_ATTGGTAT_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184434_AAGCCGAA_L004_17480_1     2  0.4406    0.57868 0.00 0.70 0.00 0.30
#> lane4_3600STDY6184436_ATTGCACA_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184441_TCCTCCGA_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184443_GATTCTAT_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184444_ATGCAAAG_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184451_GATCGAAC_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184452_GTATAGGG_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184453_GGTAAGAG_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184454_AGTCCGAT_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184458_GTGTCTGA_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184468_ATGCGTCG_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184469_TTCTTAGC_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184470_TGAGTAAG_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184472_TCGATGCG_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184476_AGGTATCC_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184477_AGGATCTC_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184478_CTGTTTGA_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184479_GGAATTTC_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184481_AAGGTCTG_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184482_AATTAGGC_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184485_CTTATTCC_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184492_GCCGAACC_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184493_ACTTTACT_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184494_GGGTCCAT_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184495_ATAACTAG_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184496_AATAGAGA_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184497_TCACCATT_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184499_GCGTGAAC_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184506_TATACATC_L004_17480_1     4  0.2647    0.86221 0.00 0.12 0.00 0.88
#> lane4_3600STDY6184513_GGACACGG_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184516_CGAATCGA_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184517_TAACAACT_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184518_AGCTCTTT_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184519_TAATCCCT_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184520_AGGACACT_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184521_TTACACTA_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184525_ATCCCCTA_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184526_CATACTAC_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184527_CAATTGTT_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184528_AAACCCGT_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184529_CAGATTTC_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184530_GCGTAGGT_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184531_GGCATTCG_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184537_GGGGACTA_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184540_TAATCAAC_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184547_GCTTAAAC_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184549_GTATCGTC_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184550_GTCCTCAC_L004_17480_1     2  0.0000    0.98295 0.00 1.00 0.00 0.00
#> lane4_3600STDY6184554_AGCAACGA_L004_17480_1     4  0.3172    0.80839 0.00 0.16 0.00 0.84
#> lane4_3600STDY6184556_CGACCCTT_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184559_AACTTATC_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane4_3600STDY6184561_TTACTACC_L004_17480_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane1_3600STDY6183798_CGATGTTT_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183799_TTAGGCAT_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183800_TGACCACT_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183801_ACAGTGGT_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183802_GCCAATGT_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183803_CAGATCTG_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183804_ACTTGATG_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183805_GATCAGCG_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183806_TAGCTTGT_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183807_GGCTACAG_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183809_TGGTTGTT_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183811_TAAGCGTT_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183812_TCCGTCTT_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183813_TGTACCTT_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183814_TTCTGTGT_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183815_TCTGCTGT_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183817_TCGAGCGT_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183818_TGATACGT_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183819_TGCATAGT_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183821_TGCGATCT_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183822_TTCCTGCT_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183823_TAGTGACT_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183824_TACAGGAT_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183825_TCCTCAAT_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183826_TGTGGTTG_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183827_TAGTCTTG_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183828_TTCCATTG_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183829_TCGAAGTG_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183830_TAACGCTG_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183831_TTGGTATG_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183832_TGAACTGG_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183833_TACTTCGG_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183834_TCTCACGG_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183835_TCAGGAGG_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183836_TAAGTTCG_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183837_TCCAGTCG_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183838_TGTATGCG_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183840_TGGCTCAG_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183842_TCAGATTC_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183843_TACTAGTC_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183844_TTCAGCTC_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183845_TGTCTATC_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183846_TATGTGGC_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183847_TTACTCGC_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183848_TCGTTAGC_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183849_TACCGAGC_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183850_TGTTCTCC_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183851_TTCGCACC_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183852_TTGCGTAC_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183853_TCTACGAC_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183854_TGACAGAC_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183855_TAGAACAC_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183856_TCATCCTA_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183858_TAGACGGA_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183859_TGTGAAGA_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183860_TCTCTTCA_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183861_TTGTTCCA_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183862_TGAAGCCA_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183863_TACCACCA_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183866_GATCTCTT_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183867_GTGTCCTT_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183868_GACGGATT_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183869_GCAACATT_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183870_GGTCGTGT_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183871_GAATCTGT_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183872_GTACATCT_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183873_GAGGTGCT_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183875_GTTAGCCT_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183876_GTCGCTAT_L001_17592_1     3  0.0707    0.97651 0.02 0.00 0.98 0.00
#> lane1_3600STDY6183877_GGAATGAT_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183878_GAGCCAAT_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183879_GCTCCTTG_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183880_GTAAGGTG_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183883_GGATTAGG_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183890_GCTAACTC_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183892_GTCTTGGC_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183893_GTAGAAGC_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183894_GATGGTCC_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183895_GTGCTACC_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183896_GCGATTAC_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183897_GGTTGGAC_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183899_GACACTTA_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183900_GTGCAGTA_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183901_GGAGTCTA_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183902_GCTATGGA_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183903_GAGTGCGA_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183904_GTAACCGA_L001_17592_1     1  0.5000    0.00248 0.50 0.00 0.50 0.00
#> lane1_3600STDY6183906_GCCTTACA_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183907_GAACGACA_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183915_CAAGACCT_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183916_CACACACT_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183917_CCTAGTAT_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183918_CCACCGAT_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183919_CTTCACAT_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183920_CTATCATG_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183921_CATGAATG_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183922_CCACTTGG_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183923_CTGTACGG_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183924_CTAGATAG_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183925_CACTCGAG_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183926_CCGACAAG_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183930_CGCTAAGC_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183931_CAACCTCC_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183935_CCATGCAC_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183936_CGTTACTA_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183937_CAAGTAGA_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183938_CTCTCTCA_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183939_CGACTGCA_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183940_CCTGAGCA_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183941_CAGGCTAA_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183942_CGGAGGAA_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183943_AGGAGATT_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183945_ACGTTCAT_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183946_AACGTGTG_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183947_AGACCGTG_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183948_ACCTCTGG_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183949_ATCCTAGG_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183950_ATCAACCG_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183951_AGGTCACG_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183954_ATTCGGAG_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183955_ACGCAATC_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183961_AATCCTGA_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183962_AGGATTCA_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183963_AACTGGCA_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183966_AATGAATT_L001_17592_1     3  0.2345    0.88247 0.10 0.00 0.90 0.00
#> lane1_3600STDY6183967_TAGGACCC_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183968_TCTCAGTG_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183969_CATGGGAA_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183971_CTCAGATA_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183972_CCCATAGG_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183973_GCTATGAC_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183974_GCTGTGAA_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183990_TACCGCAA_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183991_TATCTCCT_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183995_TTTGGGCA_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184000_GAGACATA_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184002_AGCAAGTT_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184003_GACGCTCA_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184004_ACGGCAGC_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184005_AGAACTGA_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184006_CGCCTTTG_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184007_TAAGGTCA_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184008_ACGTTGGC_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184009_CCAGCTTA_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184010_GAATCCTA_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184012_TAGTCGGT_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184013_CGCACGAG_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184015_AGCGCCAA_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184017_AGGACGAT_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184021_ATTAGCGG_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184024_GAGGGCAG_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184025_GTTTTCAC_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184026_GAGATGCC_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184027_TTGAGAAG_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184028_GCATCCGG_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184029_GTCACCAG_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184030_GAGGTCGC_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184031_AAGGGGTA_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184032_TTTTACGT_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184033_TTCCTACA_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184035_GTGGCCAA_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184036_AAATACTC_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184037_CACCCGTC_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184038_TCGTGGTT_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184041_CAGGGTCG_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184045_AACGGCTT_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184048_ATTGGTAT_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184049_CGCCAGTA_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184050_AAGCCGAA_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184052_ATTGCACA_L001_17592_1     1  0.3801    0.71544 0.78 0.00 0.22 0.00
#> lane1_3600STDY6184053_CTTTTGAT_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184054_TAGCGAGA_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184055_TTCGCAGG_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184056_TAGTTATT_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184057_TCCTCCGA_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184059_GATTCTAT_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184060_ATGCAAAG_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184069_GGTAAGAG_L001_17592_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane1_3600STDY6184072_TGAGACTC_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184073_ACTCAGGA_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184074_GTGTCTGA_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184075_CTTGAATC_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184076_CCGCATGA_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184077_AAGTAACA_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184080_TTACCTTC_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184083_TCGGACCG_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184084_ATGCGTCG_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184093_AGGATCTC_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184096_TTGGAGCA_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184097_AAGGTCTG_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184098_AATTAGGC_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184099_AATCGGGT_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184100_AGGTAGAC_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184101_CTTATTCC_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184107_GTCCGTGA_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184108_GCCGAACC_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184109_ACTTTACT_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184110_GGGTCCAT_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184117_GGTGTCGA_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184118_CCGTTAGG_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184120_CCTACCCG_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184121_AACAGCGC_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184122_TATACATC_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184123_AAGCGACT_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184124_GAAGCGCA_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184125_ACCTCTAC_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184127_GCTGGTTG_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184128_ATCGTCCT_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184129_GGACACGG_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184131_CTTCGGCT_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184133_TAACAACT_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184137_TTACACTA_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184139_CCATAGCT_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184142_CATACTAC_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184145_CAGATTTC_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184146_GCGTAGGT_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184147_GGCATTCG_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184148_TGGGGCTT_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184149_CTGACTAC_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184150_AACTTTTA_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184152_CCGAGTAG_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184153_GGGGACTA_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184155_AGCTCATC_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184157_ACTGGTCG_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184159_AGCGATGA_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184161_CGTATGCA_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184162_CACGTGCG_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184165_GTATCGTC_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184166_GTCCTCAC_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184168_CATTTTGC_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184169_TCCTCTCT_L001_17592_1     4  0.0000    0.99663 0.00 0.00 0.00 1.00
#> lane1_3600STDY6184171_ACAGAAGA_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184172_CGACCCTT_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184173_CTGCCTAG_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184174_GAGCGCAT_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184175_AACTTATC_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184176_CCGATGTA_L001_17592_1     3  0.0000    0.99858 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184177_TTACTACC_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184178_CAAGGAGC_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184179_TGGTTGAC_L001_17592_1     1  0.0000    0.99208 1.00 0.00 0.00 0.00

Heatmaps for the consensus matrix. It visualizes the probability of two samples to be in a same group.

consensus_heatmap(res, k = 2)

plot of chunk tab-node-03-consensus-heatmap-1

consensus_heatmap(res, k = 3)

plot of chunk tab-node-03-consensus-heatmap-2

consensus_heatmap(res, k = 4)

plot of chunk tab-node-03-consensus-heatmap-3

Heatmaps for the membership of samples in all partitions to see how consistent they are:

membership_heatmap(res, k = 2)

plot of chunk tab-node-03-membership-heatmap-1

membership_heatmap(res, k = 3)

plot of chunk tab-node-03-membership-heatmap-2

membership_heatmap(res, k = 4)

plot of chunk tab-node-03-membership-heatmap-3

As soon as the classes for columns are determined, the signatures that are significantly different between subgroups can be looked for. Following are the heatmaps for signatures.

Signature heatmaps where rows are scaled:

get_signatures(res, k = 2)

plot of chunk tab-node-03-get-signatures-1

get_signatures(res, k = 3)

plot of chunk tab-node-03-get-signatures-2

get_signatures(res, k = 4)

plot of chunk tab-node-03-get-signatures-3

Signature heatmaps where rows are not scaled:

get_signatures(res, k = 2, scale_rows = FALSE)

plot of chunk tab-node-03-get-signatures-no-scale-1

get_signatures(res, k = 3, scale_rows = FALSE)

plot of chunk tab-node-03-get-signatures-no-scale-2

get_signatures(res, k = 4, scale_rows = FALSE)

plot of chunk tab-node-03-get-signatures-no-scale-3

Compare the overlap of signatures from different k:

compare_signatures(res)

plot of chunk node-03-signature_compare

get_signature() returns a data frame invisibly. To get the list of signatures, the function call should be assigned to a variable explicitly. In following code, if plot argument is set to FALSE, no heatmap is plotted while only the differential analysis is performed.

# code only for demonstration
tb = get_signature(res, k = ..., plot = FALSE)

An example of the output of tb is:

#>   which_row         fdr    mean_1    mean_2 scaled_mean_1 scaled_mean_2 km
#> 1        38 0.042760348  8.373488  9.131774    -0.5533452     0.5164555  1
#> 2        40 0.018707592  7.106213  8.469186    -0.6173731     0.5762149  1
#> 3        55 0.019134737 10.221463 11.207825    -0.6159697     0.5749050  1
#> 4        59 0.006059896  5.921854  7.869574    -0.6899429     0.6439467  1
#> 5        60 0.018055526  8.928898 10.211722    -0.6204761     0.5791110  1
#> 6        98 0.009384629 15.714769 14.887706     0.6635654    -0.6193277  2
...

The columns in tb are:

  1. which_row: row indices corresponding to the input matrix.
  2. fdr: FDR for the differential test.
  3. mean_x: The mean value in group x.
  4. scaled_mean_x: The mean value in group x after rows are scaled.
  5. km: Row groups if k-means clustering is applied to rows (which is done by automatically selecting number of clusters).

If there are too many signatures, top_signatures = ... can be set to only show the signatures with the highest FDRs:

# code only for demonstration
# e.g. to show the top 500 most significant rows
tb = get_signature(res, k = ..., top_signatures = 500)

If the signatures are defined as these which are uniquely high in current group, diff_method argument can be set to "uniquely_high_in_one_group":

# code only for demonstration
tb = get_signature(res, k = ..., diff_method = "uniquely_high_in_one_group")

UMAP plot which shows how samples are separated.

dimension_reduction(res, k = 2, method = "UMAP")

plot of chunk tab-node-03-dimension-reduction-1

dimension_reduction(res, k = 3, method = "UMAP")

plot of chunk tab-node-03-dimension-reduction-2

dimension_reduction(res, k = 4, method = "UMAP")

plot of chunk tab-node-03-dimension-reduction-3

Following heatmap shows how subgroups are split when increasing k:

collect_classes(res)

plot of chunk node-03-collect-classes

Test correlation between subgroups and known annotations. If the known annotation is numeric, one-way ANOVA test is applied, and if the known annotation is discrete, chi-squared contingency table test is applied.

test_to_known_factors(res)
#>             n_sample phenotype(p-value) k
#> ATC:skmeans      448           1.28e-08 2
#> ATC:skmeans      356                 NA 3
#> ATC:skmeans      446           6.54e-19 4

If matrix rows can be associated to genes, consider to use functional_enrichment(res, ...) to perform function enrichment for the signature genes. See this vignette for more detailed explanations.


Node031

Parent node: Node03. Child nodes: Node0111-leaf , Node0112-leaf , Node0113-leaf , Node0121 , Node0122-leaf , Node0123 , Node0211-leaf , Node0212-leaf , Node0213-leaf , Node0221-leaf , Node0222 , Node0223-leaf , Node0224-leaf , Node0231-leaf , Node0232-leaf , Node0311-leaf , Node0312-leaf , Node0313-leaf , Node0341-leaf , Node0342 .

The object with results only for a single top-value method and a single partitioning method can be extracted as:

res = res_rh["031"]

A summary of res and all the functions that can be applied to it:

res
#> A 'ConsensusPartition' object with k = 2, 3, 4.
#>   On a matrix with 16090 rows and 146 columns.
#>   Top rows (1609) are extracted by 'ATC' method.
#>   Subgroups are detected by 'skmeans' method.
#>   Performed in total 150 partitions by row resampling.
#>   Best k for subgroups seems to be 4.
#> 
#> Following methods can be applied to this 'ConsensusPartition' object:
#>  [1] "cola_report"             "collect_classes"         "collect_plots"          
#>  [4] "collect_stats"           "colnames"                "compare_partitions"     
#>  [7] "compare_signatures"      "consensus_heatmap"       "dimension_reduction"    
#> [10] "functional_enrichment"   "get_anno_col"            "get_anno"               
#> [13] "get_classes"             "get_consensus"           "get_matrix"             
#> [16] "get_membership"          "get_param"               "get_signatures"         
#> [19] "get_stats"               "is_best_k"               "is_stable_k"            
#> [22] "membership_heatmap"      "ncol"                    "nrow"                   
#> [25] "plot_ecdf"               "predict_classes"         "rownames"               
#> [28] "select_partition_number" "show"                    "suggest_best_k"         
#> [31] "test_to_known_factors"   "top_rows_heatmap"

collect_plots() function collects all the plots made from res for all k (number of subgroups) into one single page to provide an easy and fast comparison between different k.

collect_plots(res)

plot of chunk node-031-collect-plots

The plots are:

All the plots in panels can be made by individual functions and they are plotted later in this section.

select_partition_number() produces several plots showing different statistics for choosing “optimized” k. There are following statistics:

The detailed explanations of these statistics can be found in the cola vignette.

Generally speaking, higher 1-PAC score, higher mean silhouette score or higher concordance corresponds to better partition. Rand index and Jaccard index measure how similar the current partition is compared to partition with k-1. If they are too similar, we won't accept k is better than k-1.

select_partition_number(res)

plot of chunk node-031-select-partition-number

The numeric values for all these statistics can be obtained by get_stats().

get_stats(res)
#>   k 1-PAC mean_silhouette concordance area_increased  Rand Jaccard
#> 2 2 1.000           0.997       0.998          0.499 0.501   0.501
#> 3 3 1.000           0.983       0.993          0.299 0.789   0.603
#> 4 4 0.943           0.925       0.959          0.143 0.860   0.628

suggest_best_k() suggests the best \(k\) based on these statistics. The rules are as follows:

suggest_best_k(res)
#> [1] 4
#> attr(,"optional")
#> [1] 2 3

There is also optional best \(k\) = 2 3 that is worth to check.

Following is the table of the partitions (You need to click the show/hide code output link to see it). The membership matrix (columns with name p*) is inferred by clue::cl_consensus() function with the SE method. Basically the value in the membership matrix represents the probability to belong to a certain group. The finall subgroup label for an item is determined with the group with highest probability it belongs to.

In get_classes() function, the entropy is calculated from the membership matrix and the silhouette score is calculated from the consensus matrix.

show/hide code output

cbind(get_classes(res, k = 2), get_membership(res, k = 2))
#>                                             class entropy silhouette   p1   p2
#> lane4_3600STDY6184194_TCTCGGTT_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184195_TAAGCGTT_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184201_TCGAGCGT_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane4_3600STDY6184382_GTCACGTA_L004_17480_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183798_CGATGTTT_L001_17592_1     2   0.402      0.914 0.08 0.92
#> lane1_3600STDY6183799_TTAGGCAT_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183800_TGACCACT_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183801_ACAGTGGT_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183802_GCCAATGT_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183803_CAGATCTG_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183804_ACTTGATG_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183805_GATCAGCG_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183806_TAGCTTGT_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183807_GGCTACAG_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183809_TGGTTGTT_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183811_TAAGCGTT_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183812_TCCGTCTT_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183817_TCGAGCGT_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183818_TGATACGT_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183819_TGCATAGT_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183821_TGCGATCT_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183823_TAGTGACT_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183824_TACAGGAT_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183825_TCCTCAAT_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183826_TGTGGTTG_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183827_TAGTCTTG_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183828_TTCCATTG_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183829_TCGAAGTG_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183830_TAACGCTG_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183831_TTGGTATG_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183832_TGAACTGG_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183833_TACTTCGG_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183834_TCTCACGG_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183835_TCAGGAGG_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183836_TAAGTTCG_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183837_TCCAGTCG_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183842_TCAGATTC_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183843_TACTAGTC_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183844_TTCAGCTC_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183845_TGTCTATC_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183846_TATGTGGC_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183848_TCGTTAGC_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183849_TACCGAGC_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183850_TGTTCTCC_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183851_TTCGCACC_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183852_TTGCGTAC_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183853_TCTACGAC_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183854_TGACAGAC_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183855_TAGAACAC_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183856_TCATCCTA_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183861_TTGTTCCA_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183866_GATCTCTT_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183867_GTGTCCTT_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183869_GCAACATT_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183870_GGTCGTGT_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183873_GAGGTGCT_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183877_GGAATGAT_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183878_GAGCCAAT_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183880_GTAAGGTG_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183893_GTAGAAGC_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183894_GATGGTCC_L001_17592_1     1   0.141      0.979 0.98 0.02
#> lane1_3600STDY6183901_GGAGTCTA_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183902_GCTATGGA_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183904_GTAACCGA_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183917_CCTAGTAT_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183918_CCACCGAT_L001_17592_1     2   0.242      0.958 0.04 0.96
#> lane1_3600STDY6183920_CTATCATG_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183921_CATGAATG_L001_17592_1     1   0.141      0.979 0.98 0.02
#> lane1_3600STDY6183923_CTGTACGG_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183925_CACTCGAG_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183926_CCGACAAG_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183938_CTCTCTCA_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183940_CCTGAGCA_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183941_CAGGCTAA_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183943_AGGAGATT_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183946_AACGTGTG_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183947_AGACCGTG_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183948_ACCTCTGG_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183949_ATCCTAGG_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183950_ATCAACCG_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183951_AGGTCACG_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183954_ATTCGGAG_L001_17592_1     1   0.402      0.914 0.92 0.08
#> lane1_3600STDY6183967_TAGGACCC_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183969_CATGGGAA_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183971_CTCAGATA_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183973_GCTATGAC_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183974_GCTGTGAA_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183990_TACCGCAA_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6183991_TATCTCCT_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6183995_TTTGGGCA_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184000_GAGACATA_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6184002_AGCAAGTT_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6184003_GACGCTCA_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6184004_ACGGCAGC_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6184005_AGAACTGA_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6184006_CGCCTTTG_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184008_ACGTTGGC_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184009_CCAGCTTA_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184010_GAATCCTA_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184012_TAGTCGGT_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6184015_AGCGCCAA_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184017_AGGACGAT_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184021_ATTAGCGG_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184024_GAGGGCAG_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6184025_GTTTTCAC_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184026_GAGATGCC_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184027_TTGAGAAG_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6184028_GCATCCGG_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184029_GTCACCAG_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6184032_TTTTACGT_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184033_TTCCTACA_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184035_GTGGCCAA_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184036_AAATACTC_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6184037_CACCCGTC_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184045_AACGGCTT_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184048_ATTGGTAT_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184049_CGCCAGTA_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184050_AAGCCGAA_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184052_ATTGCACA_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184053_CTTTTGAT_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184055_TTCGCAGG_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184057_TCCTCCGA_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6184059_GATTCTAT_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184060_ATGCAAAG_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184074_GTGTCTGA_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184084_ATGCGTCG_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6184096_TTGGAGCA_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6184097_AAGGTCTG_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184108_GCCGAACC_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6184110_GGGTCCAT_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184120_CCTACCCG_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184121_AACAGCGC_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184122_TATACATC_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6184128_ATCGTCCT_L001_17592_1     2   0.000      0.998 0.00 1.00
#> lane1_3600STDY6184131_CTTCGGCT_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184145_CAGATTTC_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184146_GCGTAGGT_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184155_AGCTCATC_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184157_ACTGGTCG_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184166_GTCCTCAC_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184168_CATTTTGC_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184171_ACAGAAGA_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184173_CTGCCTAG_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184177_TTACTACC_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184178_CAAGGAGC_L001_17592_1     1   0.000      0.998 1.00 0.00
#> lane1_3600STDY6184179_TGGTTGAC_L001_17592_1     1   0.000      0.998 1.00 0.00

show/hide code output

cbind(get_classes(res, k = 3), get_membership(res, k = 3))
#>                                             class entropy silhouette   p1   p2   p3
#> lane4_3600STDY6184194_TCTCGGTT_L004_17480_1     2  0.0000      0.990 0.00 1.00 0.00
#> lane4_3600STDY6184195_TAAGCGTT_L004_17480_1     2  0.0000      0.990 0.00 1.00 0.00
#> lane4_3600STDY6184201_TCGAGCGT_L004_17480_1     3  0.0000      0.992 0.00 0.00 1.00
#> lane4_3600STDY6184382_GTCACGTA_L004_17480_1     3  0.0000      0.992 0.00 0.00 1.00
#> lane1_3600STDY6183798_CGATGTTT_L001_17592_1     2  0.0000      0.990 0.00 1.00 0.00
#> lane1_3600STDY6183799_TTAGGCAT_L001_17592_1     2  0.0000      0.990 0.00 1.00 0.00
#> lane1_3600STDY6183800_TGACCACT_L001_17592_1     2  0.0000      0.990 0.00 1.00 0.00
#> lane1_3600STDY6183801_ACAGTGGT_L001_17592_1     2  0.0000      0.990 0.00 1.00 0.00
#> lane1_3600STDY6183802_GCCAATGT_L001_17592_1     2  0.0000      0.990 0.00 1.00 0.00
#> lane1_3600STDY6183803_CAGATCTG_L001_17592_1     2  0.0000      0.990 0.00 1.00 0.00
#> lane1_3600STDY6183804_ACTTGATG_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6183805_GATCAGCG_L001_17592_1     2  0.0000      0.990 0.00 1.00 0.00
#> lane1_3600STDY6183806_TAGCTTGT_L001_17592_1     2  0.0000      0.990 0.00 1.00 0.00
#> lane1_3600STDY6183807_GGCTACAG_L001_17592_1     2  0.0000      0.990 0.00 1.00 0.00
#> lane1_3600STDY6183809_TGGTTGTT_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6183811_TAAGCGTT_L001_17592_1     2  0.0000      0.990 0.00 1.00 0.00
#> lane1_3600STDY6183812_TCCGTCTT_L001_17592_1     3  0.0000      0.992 0.00 0.00 1.00
#> lane1_3600STDY6183817_TCGAGCGT_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6183818_TGATACGT_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6183819_TGCATAGT_L001_17592_1     3  0.0000      0.992 0.00 0.00 1.00
#> lane1_3600STDY6183821_TGCGATCT_L001_17592_1     2  0.0000      0.990 0.00 1.00 0.00
#> lane1_3600STDY6183823_TAGTGACT_L001_17592_1     2  0.0000      0.990 0.00 1.00 0.00
#> lane1_3600STDY6183824_TACAGGAT_L001_17592_1     2  0.0000      0.990 0.00 1.00 0.00
#> lane1_3600STDY6183825_TCCTCAAT_L001_17592_1     2  0.0000      0.990 0.00 1.00 0.00
#> lane1_3600STDY6183826_TGTGGTTG_L001_17592_1     2  0.0000      0.990 0.00 1.00 0.00
#> lane1_3600STDY6183827_TAGTCTTG_L001_17592_1     2  0.0000      0.990 0.00 1.00 0.00
#> lane1_3600STDY6183828_TTCCATTG_L001_17592_1     2  0.0000      0.990 0.00 1.00 0.00
#> lane1_3600STDY6183829_TCGAAGTG_L001_17592_1     2  0.0000      0.990 0.00 1.00 0.00
#> lane1_3600STDY6183830_TAACGCTG_L001_17592_1     2  0.0000      0.990 0.00 1.00 0.00
#> lane1_3600STDY6183831_TTGGTATG_L001_17592_1     2  0.0000      0.990 0.00 1.00 0.00
#> lane1_3600STDY6183832_TGAACTGG_L001_17592_1     2  0.0000      0.990 0.00 1.00 0.00
#> lane1_3600STDY6183833_TACTTCGG_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6183834_TCTCACGG_L001_17592_1     2  0.0000      0.990 0.00 1.00 0.00
#> lane1_3600STDY6183835_TCAGGAGG_L001_17592_1     3  0.0000      0.992 0.00 0.00 1.00
#> lane1_3600STDY6183836_TAAGTTCG_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6183837_TCCAGTCG_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6183842_TCAGATTC_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6183843_TACTAGTC_L001_17592_1     3  0.0000      0.992 0.00 0.00 1.00
#> lane1_3600STDY6183844_TTCAGCTC_L001_17592_1     3  0.0000      0.992 0.00 0.00 1.00
#> lane1_3600STDY6183845_TGTCTATC_L001_17592_1     2  0.0000      0.990 0.00 1.00 0.00
#> lane1_3600STDY6183846_TATGTGGC_L001_17592_1     2  0.0000      0.990 0.00 1.00 0.00
#> lane1_3600STDY6183848_TCGTTAGC_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6183849_TACCGAGC_L001_17592_1     2  0.0000      0.990 0.00 1.00 0.00
#> lane1_3600STDY6183850_TGTTCTCC_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6183851_TTCGCACC_L001_17592_1     2  0.0000      0.990 0.00 1.00 0.00
#> lane1_3600STDY6183852_TTGCGTAC_L001_17592_1     2  0.0000      0.990 0.00 1.00 0.00
#> lane1_3600STDY6183853_TCTACGAC_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6183854_TGACAGAC_L001_17592_1     2  0.0000      0.990 0.00 1.00 0.00
#> lane1_3600STDY6183855_TAGAACAC_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6183856_TCATCCTA_L001_17592_1     2  0.0000      0.990 0.00 1.00 0.00
#> lane1_3600STDY6183861_TTGTTCCA_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6183866_GATCTCTT_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6183867_GTGTCCTT_L001_17592_1     3  0.0000      0.992 0.00 0.00 1.00
#> lane1_3600STDY6183869_GCAACATT_L001_17592_1     2  0.0000      0.990 0.00 1.00 0.00
#> lane1_3600STDY6183870_GGTCGTGT_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6183873_GAGGTGCT_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6183877_GGAATGAT_L001_17592_1     3  0.0000      0.992 0.00 0.00 1.00
#> lane1_3600STDY6183878_GAGCCAAT_L001_17592_1     2  0.5948      0.436 0.00 0.64 0.36
#> lane1_3600STDY6183880_GTAAGGTG_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6183893_GTAGAAGC_L001_17592_1     2  0.0000      0.990 0.00 1.00 0.00
#> lane1_3600STDY6183894_GATGGTCC_L001_17592_1     1  0.5560      0.569 0.70 0.30 0.00
#> lane1_3600STDY6183901_GGAGTCTA_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6183902_GCTATGGA_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6183904_GTAACCGA_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6183917_CCTAGTAT_L001_17592_1     2  0.0000      0.990 0.00 1.00 0.00
#> lane1_3600STDY6183918_CCACCGAT_L001_17592_1     2  0.0000      0.990 0.00 1.00 0.00
#> lane1_3600STDY6183920_CTATCATG_L001_17592_1     2  0.0000      0.990 0.00 1.00 0.00
#> lane1_3600STDY6183921_CATGAATG_L001_17592_1     1  0.0892      0.974 0.98 0.02 0.00
#> lane1_3600STDY6183923_CTGTACGG_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6183925_CACTCGAG_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6183926_CCGACAAG_L001_17592_1     2  0.0000      0.990 0.00 1.00 0.00
#> lane1_3600STDY6183938_CTCTCTCA_L001_17592_1     3  0.0000      0.992 0.00 0.00 1.00
#> lane1_3600STDY6183940_CCTGAGCA_L001_17592_1     3  0.0000      0.992 0.00 0.00 1.00
#> lane1_3600STDY6183941_CAGGCTAA_L001_17592_1     2  0.2959      0.870 0.10 0.90 0.00
#> lane1_3600STDY6183943_AGGAGATT_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6183946_AACGTGTG_L001_17592_1     2  0.0000      0.990 0.00 1.00 0.00
#> lane1_3600STDY6183947_AGACCGTG_L001_17592_1     2  0.0000      0.990 0.00 1.00 0.00
#> lane1_3600STDY6183948_ACCTCTGG_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6183949_ATCCTAGG_L001_17592_1     3  0.0892      0.973 0.00 0.02 0.98
#> lane1_3600STDY6183950_ATCAACCG_L001_17592_1     2  0.0000      0.990 0.00 1.00 0.00
#> lane1_3600STDY6183951_AGGTCACG_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6183954_ATTCGGAG_L001_17592_1     3  0.0000      0.992 0.00 0.00 1.00
#> lane1_3600STDY6183967_TAGGACCC_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6183969_CATGGGAA_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6183971_CTCAGATA_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6183973_GCTATGAC_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6183974_GCTGTGAA_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6183990_TACCGCAA_L001_17592_1     2  0.0000      0.990 0.00 1.00 0.00
#> lane1_3600STDY6183991_TATCTCCT_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6183995_TTTGGGCA_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6184000_GAGACATA_L001_17592_1     3  0.0000      0.992 0.00 0.00 1.00
#> lane1_3600STDY6184002_AGCAAGTT_L001_17592_1     2  0.0000      0.990 0.00 1.00 0.00
#> lane1_3600STDY6184003_GACGCTCA_L001_17592_1     3  0.0000      0.992 0.00 0.00 1.00
#> lane1_3600STDY6184004_ACGGCAGC_L001_17592_1     2  0.0000      0.990 0.00 1.00 0.00
#> lane1_3600STDY6184005_AGAACTGA_L001_17592_1     3  0.0000      0.992 0.00 0.00 1.00
#> lane1_3600STDY6184006_CGCCTTTG_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6184008_ACGTTGGC_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6184009_CCAGCTTA_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6184010_GAATCCTA_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6184012_TAGTCGGT_L001_17592_1     3  0.0000      0.992 0.00 0.00 1.00
#> lane1_3600STDY6184015_AGCGCCAA_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6184017_AGGACGAT_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6184021_ATTAGCGG_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6184024_GAGGGCAG_L001_17592_1     3  0.0000      0.992 0.00 0.00 1.00
#> lane1_3600STDY6184025_GTTTTCAC_L001_17592_1     3  0.4291      0.781 0.18 0.00 0.82
#> lane1_3600STDY6184026_GAGATGCC_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6184027_TTGAGAAG_L001_17592_1     3  0.0000      0.992 0.00 0.00 1.00
#> lane1_3600STDY6184028_GCATCCGG_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6184029_GTCACCAG_L001_17592_1     3  0.0000      0.992 0.00 0.00 1.00
#> lane1_3600STDY6184032_TTTTACGT_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6184033_TTCCTACA_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6184035_GTGGCCAA_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6184036_AAATACTC_L001_17592_1     2  0.0000      0.990 0.00 1.00 0.00
#> lane1_3600STDY6184037_CACCCGTC_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6184045_AACGGCTT_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6184048_ATTGGTAT_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6184049_CGCCAGTA_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6184050_AAGCCGAA_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6184052_ATTGCACA_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6184053_CTTTTGAT_L001_17592_1     3  0.1529      0.951 0.04 0.00 0.96
#> lane1_3600STDY6184055_TTCGCAGG_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6184057_TCCTCCGA_L001_17592_1     3  0.0000      0.992 0.00 0.00 1.00
#> lane1_3600STDY6184059_GATTCTAT_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6184060_ATGCAAAG_L001_17592_1     3  0.0000      0.992 0.00 0.00 1.00
#> lane1_3600STDY6184074_GTGTCTGA_L001_17592_1     3  0.0000      0.992 0.00 0.00 1.00
#> lane1_3600STDY6184084_ATGCGTCG_L001_17592_1     3  0.0000      0.992 0.00 0.00 1.00
#> lane1_3600STDY6184096_TTGGAGCA_L001_17592_1     3  0.0000      0.992 0.00 0.00 1.00
#> lane1_3600STDY6184097_AAGGTCTG_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6184108_GCCGAACC_L001_17592_1     3  0.0000      0.992 0.00 0.00 1.00
#> lane1_3600STDY6184110_GGGTCCAT_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6184120_CCTACCCG_L001_17592_1     3  0.0000      0.992 0.00 0.00 1.00
#> lane1_3600STDY6184121_AACAGCGC_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6184122_TATACATC_L001_17592_1     3  0.0000      0.992 0.00 0.00 1.00
#> lane1_3600STDY6184128_ATCGTCCT_L001_17592_1     2  0.0000      0.990 0.00 1.00 0.00
#> lane1_3600STDY6184131_CTTCGGCT_L001_17592_1     3  0.0000      0.992 0.00 0.00 1.00
#> lane1_3600STDY6184145_CAGATTTC_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6184146_GCGTAGGT_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6184155_AGCTCATC_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6184157_ACTGGTCG_L001_17592_1     3  0.0000      0.992 0.00 0.00 1.00
#> lane1_3600STDY6184166_GTCCTCAC_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6184168_CATTTTGC_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6184171_ACAGAAGA_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6184173_CTGCCTAG_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6184177_TTACTACC_L001_17592_1     3  0.0000      0.992 0.00 0.00 1.00
#> lane1_3600STDY6184178_CAAGGAGC_L001_17592_1     1  0.0000      0.995 1.00 0.00 0.00
#> lane1_3600STDY6184179_TGGTTGAC_L001_17592_1     3  0.0000      0.992 0.00 0.00 1.00

show/hide code output

cbind(get_classes(res, k = 4), get_membership(res, k = 4))
#>                                             class entropy silhouette   p1   p2   p3   p4
#> lane4_3600STDY6184194_TCTCGGTT_L004_17480_1     2  0.1637      0.939 0.00 0.94 0.06 0.00
#> lane4_3600STDY6184195_TAAGCGTT_L004_17480_1     2  0.2647      0.880 0.00 0.88 0.12 0.00
#> lane4_3600STDY6184201_TCGAGCGT_L004_17480_1     3  0.0000      0.946 0.00 0.00 1.00 0.00
#> lane4_3600STDY6184382_GTCACGTA_L004_17480_1     3  0.0000      0.946 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183798_CGATGTTT_L001_17592_1     4  0.1637      0.899 0.00 0.06 0.00 0.94
#> lane1_3600STDY6183799_TTAGGCAT_L001_17592_1     2  0.0000      0.983 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183800_TGACCACT_L001_17592_1     2  0.0000      0.983 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183801_ACAGTGGT_L001_17592_1     2  0.0000      0.983 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183802_GCCAATGT_L001_17592_1     2  0.0000      0.983 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183803_CAGATCTG_L001_17592_1     2  0.0000      0.983 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183804_ACTTGATG_L001_17592_1     4  0.0000      0.957 0.00 0.00 0.00 1.00
#> lane1_3600STDY6183805_GATCAGCG_L001_17592_1     2  0.0000      0.983 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183806_TAGCTTGT_L001_17592_1     2  0.0000      0.983 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183807_GGCTACAG_L001_17592_1     2  0.0000      0.983 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183809_TGGTTGTT_L001_17592_1     1  0.1637      0.941 0.94 0.00 0.00 0.06
#> lane1_3600STDY6183811_TAAGCGTT_L001_17592_1     2  0.0000      0.983 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183812_TCCGTCTT_L001_17592_1     3  0.2647      0.886 0.12 0.00 0.88 0.00
#> lane1_3600STDY6183817_TCGAGCGT_L001_17592_1     1  0.0000      0.936 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183818_TGATACGT_L001_17592_1     1  0.0000      0.936 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183819_TGCATAGT_L001_17592_1     3  0.2011      0.915 0.08 0.00 0.92 0.00
#> lane1_3600STDY6183821_TGCGATCT_L001_17592_1     2  0.0000      0.983 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183823_TAGTGACT_L001_17592_1     2  0.0000      0.983 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183824_TACAGGAT_L001_17592_1     2  0.0000      0.983 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183825_TCCTCAAT_L001_17592_1     2  0.0000      0.983 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183826_TGTGGTTG_L001_17592_1     2  0.0000      0.983 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183827_TAGTCTTG_L001_17592_1     2  0.0000      0.983 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183828_TTCCATTG_L001_17592_1     2  0.0000      0.983 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183829_TCGAAGTG_L001_17592_1     2  0.0000      0.983 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183830_TAACGCTG_L001_17592_1     2  0.0000      0.983 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183831_TTGGTATG_L001_17592_1     2  0.0000      0.983 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183832_TGAACTGG_L001_17592_1     2  0.0000      0.983 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183833_TACTTCGG_L001_17592_1     1  0.0000      0.936 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183834_TCTCACGG_L001_17592_1     2  0.0000      0.983 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183835_TCAGGAGG_L001_17592_1     3  0.0000      0.946 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183836_TAAGTTCG_L001_17592_1     1  0.0707      0.940 0.98 0.00 0.00 0.02
#> lane1_3600STDY6183837_TCCAGTCG_L001_17592_1     1  0.1637      0.941 0.94 0.00 0.00 0.06
#> lane1_3600STDY6183842_TCAGATTC_L001_17592_1     1  0.1637      0.941 0.94 0.00 0.00 0.06
#> lane1_3600STDY6183843_TACTAGTC_L001_17592_1     3  0.0000      0.946 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183844_TTCAGCTC_L001_17592_1     3  0.0000      0.946 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183845_TGTCTATC_L001_17592_1     2  0.0000      0.983 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183846_TATGTGGC_L001_17592_1     2  0.0000      0.983 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183848_TCGTTAGC_L001_17592_1     4  0.0000      0.957 0.00 0.00 0.00 1.00
#> lane1_3600STDY6183849_TACCGAGC_L001_17592_1     2  0.0000      0.983 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183850_TGTTCTCC_L001_17592_1     4  0.0000      0.957 0.00 0.00 0.00 1.00
#> lane1_3600STDY6183851_TTCGCACC_L001_17592_1     2  0.0000      0.983 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183852_TTGCGTAC_L001_17592_1     2  0.0000      0.983 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183853_TCTACGAC_L001_17592_1     4  0.0000      0.957 0.00 0.00 0.00 1.00
#> lane1_3600STDY6183854_TGACAGAC_L001_17592_1     2  0.0000      0.983 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183855_TAGAACAC_L001_17592_1     4  0.0000      0.957 0.00 0.00 0.00 1.00
#> lane1_3600STDY6183856_TCATCCTA_L001_17592_1     2  0.3801      0.746 0.00 0.78 0.22 0.00
#> lane1_3600STDY6183861_TTGTTCCA_L001_17592_1     1  0.2011      0.931 0.92 0.00 0.00 0.08
#> lane1_3600STDY6183866_GATCTCTT_L001_17592_1     1  0.0707      0.940 0.98 0.00 0.00 0.02
#> lane1_3600STDY6183867_GTGTCCTT_L001_17592_1     3  0.1637      0.925 0.06 0.00 0.94 0.00
#> lane1_3600STDY6183869_GCAACATT_L001_17592_1     2  0.0000      0.983 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183870_GGTCGTGT_L001_17592_1     4  0.0000      0.957 0.00 0.00 0.00 1.00
#> lane1_3600STDY6183873_GAGGTGCT_L001_17592_1     4  0.4134      0.605 0.26 0.00 0.00 0.74
#> lane1_3600STDY6183877_GGAATGAT_L001_17592_1     3  0.0000      0.946 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183878_GAGCCAAT_L001_17592_1     3  0.6299      0.142 0.00 0.42 0.52 0.06
#> lane1_3600STDY6183880_GTAAGGTG_L001_17592_1     1  0.1637      0.941 0.94 0.00 0.00 0.06
#> lane1_3600STDY6183893_GTAGAAGC_L001_17592_1     2  0.0000      0.983 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183894_GATGGTCC_L001_17592_1     4  0.0707      0.939 0.00 0.02 0.00 0.98
#> lane1_3600STDY6183901_GGAGTCTA_L001_17592_1     1  0.2011      0.931 0.92 0.00 0.00 0.08
#> lane1_3600STDY6183902_GCTATGGA_L001_17592_1     1  0.0000      0.936 1.00 0.00 0.00 0.00
#> lane1_3600STDY6183904_GTAACCGA_L001_17592_1     1  0.2011      0.931 0.92 0.00 0.00 0.08
#> lane1_3600STDY6183917_CCTAGTAT_L001_17592_1     2  0.0000      0.983 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183918_CCACCGAT_L001_17592_1     4  0.1637      0.905 0.00 0.06 0.00 0.94
#> lane1_3600STDY6183920_CTATCATG_L001_17592_1     2  0.0000      0.983 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183921_CATGAATG_L001_17592_1     4  0.0000      0.957 0.00 0.00 0.00 1.00
#> lane1_3600STDY6183923_CTGTACGG_L001_17592_1     4  0.0000      0.957 0.00 0.00 0.00 1.00
#> lane1_3600STDY6183925_CACTCGAG_L001_17592_1     4  0.3400      0.745 0.18 0.00 0.00 0.82
#> lane1_3600STDY6183926_CCGACAAG_L001_17592_1     2  0.1637      0.939 0.00 0.94 0.06 0.00
#> lane1_3600STDY6183938_CTCTCTCA_L001_17592_1     3  0.2011      0.916 0.08 0.00 0.92 0.00
#> lane1_3600STDY6183940_CCTGAGCA_L001_17592_1     3  0.0000      0.946 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183941_CAGGCTAA_L001_17592_1     4  0.0000      0.957 0.00 0.00 0.00 1.00
#> lane1_3600STDY6183943_AGGAGATT_L001_17592_1     4  0.0000      0.957 0.00 0.00 0.00 1.00
#> lane1_3600STDY6183946_AACGTGTG_L001_17592_1     4  0.4522      0.534 0.00 0.32 0.00 0.68
#> lane1_3600STDY6183947_AGACCGTG_L001_17592_1     2  0.0000      0.983 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183948_ACCTCTGG_L001_17592_1     4  0.0000      0.957 0.00 0.00 0.00 1.00
#> lane1_3600STDY6183949_ATCCTAGG_L001_17592_1     3  0.0000      0.946 0.00 0.00 1.00 0.00
#> lane1_3600STDY6183950_ATCAACCG_L001_17592_1     2  0.0000      0.983 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183951_AGGTCACG_L001_17592_1     4  0.0000      0.957 0.00 0.00 0.00 1.00
#> lane1_3600STDY6183954_ATTCGGAG_L001_17592_1     3  0.1637      0.925 0.06 0.00 0.94 0.00
#> lane1_3600STDY6183967_TAGGACCC_L001_17592_1     4  0.0000      0.957 0.00 0.00 0.00 1.00
#> lane1_3600STDY6183969_CATGGGAA_L001_17592_1     4  0.0000      0.957 0.00 0.00 0.00 1.00
#> lane1_3600STDY6183971_CTCAGATA_L001_17592_1     4  0.0000      0.957 0.00 0.00 0.00 1.00
#> lane1_3600STDY6183973_GCTATGAC_L001_17592_1     4  0.0000      0.957 0.00 0.00 0.00 1.00
#> lane1_3600STDY6183974_GCTGTGAA_L001_17592_1     4  0.0000      0.957 0.00 0.00 0.00 1.00
#> lane1_3600STDY6183990_TACCGCAA_L001_17592_1     2  0.0000      0.983 0.00 1.00 0.00 0.00
#> lane1_3600STDY6183991_TATCTCCT_L001_17592_1     1  0.4907      0.387 0.58 0.00 0.00 0.42
#> lane1_3600STDY6183995_TTTGGGCA_L001_17592_1     1  0.1637      0.941 0.94 0.00 0.00 0.06
#> lane1_3600STDY6184000_GAGACATA_L001_17592_1     3  0.0000      0.946 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184002_AGCAAGTT_L001_17592_1     2  0.1211      0.955 0.00 0.96 0.04 0.00
#> lane1_3600STDY6184003_GACGCTCA_L001_17592_1     3  0.0000      0.946 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184004_ACGGCAGC_L001_17592_1     2  0.2921      0.857 0.00 0.86 0.14 0.00
#> lane1_3600STDY6184005_AGAACTGA_L001_17592_1     3  0.0707      0.932 0.00 0.02 0.98 0.00
#> lane1_3600STDY6184006_CGCCTTTG_L001_17592_1     1  0.2345      0.916 0.90 0.00 0.00 0.10
#> lane1_3600STDY6184008_ACGTTGGC_L001_17592_1     1  0.1637      0.941 0.94 0.00 0.00 0.06
#> lane1_3600STDY6184009_CCAGCTTA_L001_17592_1     1  0.2921      0.880 0.86 0.00 0.00 0.14
#> lane1_3600STDY6184010_GAATCCTA_L001_17592_1     1  0.2921      0.880 0.86 0.00 0.00 0.14
#> lane1_3600STDY6184012_TAGTCGGT_L001_17592_1     3  0.0000      0.946 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184015_AGCGCCAA_L001_17592_1     1  0.4790      0.489 0.62 0.00 0.00 0.38
#> lane1_3600STDY6184017_AGGACGAT_L001_17592_1     1  0.1637      0.941 0.94 0.00 0.00 0.06
#> lane1_3600STDY6184021_ATTAGCGG_L001_17592_1     1  0.0000      0.936 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184024_GAGGGCAG_L001_17592_1     3  0.0000      0.946 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184025_GTTTTCAC_L001_17592_1     1  0.1211      0.908 0.96 0.00 0.04 0.00
#> lane1_3600STDY6184026_GAGATGCC_L001_17592_1     4  0.0000      0.957 0.00 0.00 0.00 1.00
#> lane1_3600STDY6184027_TTGAGAAG_L001_17592_1     3  0.0000      0.946 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184028_GCATCCGG_L001_17592_1     1  0.0707      0.940 0.98 0.00 0.00 0.02
#> lane1_3600STDY6184029_GTCACCAG_L001_17592_1     3  0.0000      0.946 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184032_TTTTACGT_L001_17592_1     1  0.1637      0.941 0.94 0.00 0.00 0.06
#> lane1_3600STDY6184033_TTCCTACA_L001_17592_1     1  0.0000      0.936 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184035_GTGGCCAA_L001_17592_1     1  0.1637      0.941 0.94 0.00 0.00 0.06
#> lane1_3600STDY6184036_AAATACTC_L001_17592_1     2  0.1211      0.955 0.00 0.96 0.04 0.00
#> lane1_3600STDY6184037_CACCCGTC_L001_17592_1     1  0.2011      0.931 0.92 0.00 0.00 0.08
#> lane1_3600STDY6184045_AACGGCTT_L001_17592_1     1  0.1637      0.941 0.94 0.00 0.00 0.06
#> lane1_3600STDY6184048_ATTGGTAT_L001_17592_1     1  0.0000      0.936 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184049_CGCCAGTA_L001_17592_1     1  0.0000      0.936 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184050_AAGCCGAA_L001_17592_1     4  0.0000      0.957 0.00 0.00 0.00 1.00
#> lane1_3600STDY6184052_ATTGCACA_L001_17592_1     1  0.1637      0.941 0.94 0.00 0.00 0.06
#> lane1_3600STDY6184053_CTTTTGAT_L001_17592_1     1  0.2011      0.871 0.92 0.00 0.08 0.00
#> lane1_3600STDY6184055_TTCGCAGG_L001_17592_1     1  0.0000      0.936 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184057_TCCTCCGA_L001_17592_1     3  0.0000      0.946 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184059_GATTCTAT_L001_17592_1     1  0.0000      0.936 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184060_ATGCAAAG_L001_17592_1     3  0.3172      0.848 0.16 0.00 0.84 0.00
#> lane1_3600STDY6184074_GTGTCTGA_L001_17592_1     3  0.2011      0.915 0.08 0.00 0.92 0.00
#> lane1_3600STDY6184084_ATGCGTCG_L001_17592_1     3  0.0000      0.946 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184096_TTGGAGCA_L001_17592_1     3  0.0000      0.946 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184097_AAGGTCTG_L001_17592_1     1  0.0000      0.936 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184108_GCCGAACC_L001_17592_1     3  0.0000      0.946 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184110_GGGTCCAT_L001_17592_1     1  0.3172      0.858 0.84 0.00 0.00 0.16
#> lane1_3600STDY6184120_CCTACCCG_L001_17592_1     1  0.0707      0.924 0.98 0.00 0.02 0.00
#> lane1_3600STDY6184121_AACAGCGC_L001_17592_1     1  0.0000      0.936 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184122_TATACATC_L001_17592_1     3  0.0000      0.946 0.00 0.00 1.00 0.00
#> lane1_3600STDY6184128_ATCGTCCT_L001_17592_1     2  0.0707      0.969 0.00 0.98 0.02 0.00
#> lane1_3600STDY6184131_CTTCGGCT_L001_17592_1     3  0.3172      0.846 0.16 0.00 0.84 0.00
#> lane1_3600STDY6184145_CAGATTTC_L001_17592_1     1  0.0000      0.936 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184146_GCGTAGGT_L001_17592_1     1  0.2011      0.931 0.92 0.00 0.00 0.08
#> lane1_3600STDY6184155_AGCTCATC_L001_17592_1     1  0.1211      0.941 0.96 0.00 0.00 0.04
#> lane1_3600STDY6184157_ACTGGTCG_L001_17592_1     3  0.2345      0.902 0.10 0.00 0.90 0.00
#> lane1_3600STDY6184166_GTCCTCAC_L001_17592_1     1  0.0000      0.936 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184168_CATTTTGC_L001_17592_1     1  0.0000      0.936 1.00 0.00 0.00 0.00
#> lane1_3600STDY6184171_ACAGAAGA_L001_17592_1     1  0.2011      0.931 0.92 0.00 0.00 0.08
#> lane1_3600STDY6184173_CTGCCTAG_L001_17592_1     1  0.1637      0.941 0.94 0.00 0.00 0.06
#> lane1_3600STDY6184177_TTACTACC_L001_17592_1     3  0.2921      0.866 0.14 0.00 0.86 0.00
#> lane1_3600STDY6184178_CAAGGAGC_L001_17592_1     1  0.1637      0.941 0.94 0.00 0.00 0.06
#> lane1_3600STDY6184179_TGGTTGAC_L001_17592_1     3  0.1637      0.925 0.06 0.00 0.94 0.00

Heatmaps for the consensus matrix. It visualizes the probability of two samples to be in a same group.

consensus_heatmap(res, k = 2)

plot of chunk tab-node-031-consensus-heatmap-1

consensus_heatmap(res, k = 3)

plot of chunk tab-node-031-consensus-heatmap-2

consensus_heatmap(res, k = 4)

plot of chunk tab-node-031-consensus-heatmap-3

Heatmaps for the membership of samples in all partitions to see how consistent they are:

membership_heatmap(res, k = 2)

plot of chunk tab-node-031-membership-heatmap-1

membership_heatmap(res, k = 3)

plot of chunk tab-node-031-membership-heatmap-2

membership_heatmap(res, k = 4)

plot of chunk tab-node-031-membership-heatmap-3

As soon as the classes for columns are determined, the signatures that are significantly different between subgroups can be looked for. Following are the heatmaps for signatures.

Signature heatmaps where rows are scaled:

get_signatures(res, k = 2)

plot of chunk tab-node-031-get-signatures-1

get_signatures(res, k = 3)

plot of chunk tab-node-031-get-signatures-2

get_signatures(res, k = 4)

plot of chunk tab-node-031-get-signatures-3

Signature heatmaps where rows are not scaled:

get_signatures(res, k = 2, scale_rows = FALSE)

plot of chunk tab-node-031-get-signatures-no-scale-1

get_signatures(res, k = 3, scale_rows = FALSE)

plot of chunk tab-node-031-get-signatures-no-scale-2

get_signatures(res, k = 4, scale_rows = FALSE)

plot of chunk tab-node-031-get-signatures-no-scale-3

Compare the overlap of signatures from different k:

compare_signatures(res)

plot of chunk node-031-signature_compare

get_signature() returns a data frame invisibly. To get the list of signatures, the function call should be assigned to a variable explicitly. In following code, if plot argument is set to FALSE, no heatmap is plotted while only the differential analysis is performed.

# code only for demonstration
tb = get_signature(res, k = ..., plot = FALSE)

An example of the output of tb is:

#>   which_row         fdr    mean_1    mean_2 scaled_mean_1 scaled_mean_2 km
#> 1        38 0.042760348  8.373488  9.131774    -0.5533452     0.5164555  1
#> 2        40 0.018707592  7.106213  8.469186    -0.6173731     0.5762149  1
#> 3        55 0.019134737 10.221463 11.207825    -0.6159697     0.5749050  1
#> 4        59 0.006059896  5.921854  7.869574    -0.6899429     0.6439467  1
#> 5        60 0.018055526  8.928898 10.211722    -0.6204761     0.5791110  1
#> 6        98 0.009384629 15.714769 14.887706     0.6635654    -0.6193277  2
...

The columns in tb are:

  1. which_row: row indices corresponding to the input matrix.
  2. fdr: FDR for the differential test.
  3. mean_x: The mean value in group x.
  4. scaled_mean_x: The mean value in group x after rows are scaled.
  5. km: Row groups if k-means clustering is applied to rows (which is done by automatically selecting number of clusters).

If there are too many signatures, top_signatures = ... can be set to only show the signatures with the highest FDRs:

# code only for demonstration
# e.g. to show the top 500 most significant rows
tb = get_signature(res, k = ..., top_signatures = 500)

If the signatures are defined as these which are uniquely high in current group, diff_method argument can be set to "uniquely_high_in_one_group":

# code only for demonstration
tb = get_signature(res, k = ..., diff_method = "uniquely_high_in_one_group")

UMAP plot which shows how samples are separated.

dimension_reduction(res, k = 2, method = "UMAP")

plot of chunk tab-node-031-dimension-reduction-1

dimension_reduction(res, k = 3, method = "UMAP")

plot of chunk tab-node-031-dimension-reduction-2

dimension_reduction(res, k = 4, method = "UMAP")

plot of chunk tab-node-031-dimension-reduction-3

Following heatmap shows how subgroups are split when increasing k:

collect_classes(res)

plot of chunk node-031-collect-classes

Test correlation between subgroups and known annotations. If the known annotation is numeric, one-way ANOVA test is applied, and if the known annotation is discrete, chi-squared contingency table test is applied.

test_to_known_factors(res)
#>             n_sample phenotype(p-value) k
#> ATC:skmeans      146                 NA 2
#> ATC:skmeans      145                 NA 3
#> ATC:skmeans      143                 NA 4

If matrix rows can be associated to genes, consider to use functional_enrichment(res, ...) to perform function enrichment for the signature genes. See this vignette for more detailed explanations.


Node034

Parent node: Node03. Child nodes: Node0111-leaf , Node0112-leaf , Node0113-leaf , Node0121 , Node0122-leaf , Node0123 , Node0211-leaf , Node0212-leaf , Node0213-leaf , Node0221-leaf , Node0222 , Node0223-leaf , Node0224-leaf , Node0231-leaf , Node0232-leaf , Node0311-leaf , Node0312-leaf , Node0313-leaf , Node0341-leaf , Node0342 .

The object with results only for a single top-value method and a single partitioning method can be extracted as:

res = res_rh["034"]

A summary of res and all the functions that can be applied to it:

res
#> A 'ConsensusPartition' object with k = 2, 3, 4.
#>   On a matrix with 15786 rows and 110 columns.
#>   Top rows (1579) are extracted by 'ATC' method.
#>   Subgroups are detected by 'skmeans' method.
#>   Performed in total 150 partitions by row resampling.
#>   Best k for subgroups seems to be 3.
#> 
#> Following methods can be applied to this 'ConsensusPartition' object:
#>  [1] "cola_report"             "collect_classes"         "collect_plots"          
#>  [4] "collect_stats"           "colnames"                "compare_partitions"     
#>  [7] "compare_signatures"      "consensus_heatmap"       "dimension_reduction"    
#> [10] "functional_enrichment"   "get_anno_col"            "get_anno"               
#> [13] "get_classes"             "get_consensus"           "get_matrix"             
#> [16] "get_membership"          "get_param"               "get_signatures"         
#> [19] "get_stats"               "is_best_k"               "is_stable_k"            
#> [22] "membership_heatmap"      "ncol"                    "nrow"                   
#> [25] "plot_ecdf"               "predict_classes"         "rownames"               
#> [28] "select_partition_number" "show"                    "suggest_best_k"         
#> [31] "test_to_known_factors"   "top_rows_heatmap"

collect_plots() function collects all the plots made from res for all k (number of subgroups) into one single page to provide an easy and fast comparison between different k.

collect_plots(res)

plot of chunk node-034-collect-plots

The plots are:

All the plots in panels can be made by individual functions and they are plotted later in this section.

select_partition_number() produces several plots showing different statistics for choosing “optimized” k. There are following statistics:

The detailed explanations of these statistics can be found in the cola vignette.

Generally speaking, higher 1-PAC score, higher mean silhouette score or higher concordance corresponds to better partition. Rand index and Jaccard index measure how similar the current partition is compared to partition with k-1. If they are too similar, we won't accept k is better than k-1.

select_partition_number(res)

plot of chunk node-034-select-partition-number

The numeric values for all these statistics can be obtained by get_stats().

get_stats(res)
#>   k 1-PAC mean_silhouette concordance area_increased  Rand Jaccard
#> 2 2 1.000           0.995       0.998          0.399 0.600   0.600
#> 3 3 1.000           0.985       0.994          0.355 0.851   0.752
#> 4 4 0.741           0.832       0.913          0.313 0.796   0.567

suggest_best_k() suggests the best \(k\) based on these statistics. The rules are as follows:

suggest_best_k(res)
#> [1] 3
#> attr(,"optional")
#> [1] 2

There is also optional best \(k\) = 2 that is worth to check.

Following is the table of the partitions (You need to click the show/hide code output link to see it). The membership matrix (columns with name p*) is inferred by clue::cl_consensus() function with the SE method. Basically the value in the membership matrix represents the probability to belong to a certain group. The finall subgroup label for an item is determined with the group with highest probability it belongs to.

In get_classes() function, the entropy is calculated from the membership matrix and the silhouette score is calculated from the consensus matrix.

show/hide code output

cbind(get_classes(res, k = 2), get_membership(res, k = 2))
#>                                             class entropy silhouette   p1   p2
#> lane3_3600STDY6078002_TCATTGAG_L003_15987_1     2    0.00      0.992 0.00 1.00
#> lane1_3600STDY6167695_TTAGGCAT_L001_17236_1     2    0.00      0.992 0.00 1.00
#> lane1_3600STDY6167704_CTTGTACT_L001_17236_1     2    0.00      0.992 0.00 1.00
#> lane1_3600STDY6167719_TAGTGACT_L001_17236_1     2    0.00      0.992 0.00 1.00
#> lane1_3600STDY6167720_TACAGGAT_L001_17236_1     2    0.00      0.992 0.00 1.00
#> lane1_3600STDY6167721_TCCTCAAT_L001_17236_1     2    0.00      0.992 0.00 1.00
#> lane1_3600STDY6167745_TACCGAGC_L001_17236_1     2    0.00      0.992 0.00 1.00
#> lane1_3600STDY6167747_TTCGCACC_L001_17236_1     2    0.00      0.992 0.00 1.00
#> lane1_3600STDY6167799_GAGTGCGA_L001_17236_1     2    0.00      0.992 0.00 1.00
#> lane1_3600STDY6167817_CATGAATG_L001_17236_1     2    0.00      0.992 0.00 1.00
#> lane1_3600STDY6167821_CACTCGAG_L001_17236_1     2    0.00      0.992 0.00 1.00
#> lane1_3600STDY6167841_ACGTTCAT_L001_17236_1     2    0.00      0.992 0.00 1.00
#> lane1_3600STDY6167843_AGACCGTG_L001_17236_1     2    0.00      0.992 0.00 1.00
#> lane1_3600STDY6167885_GTAAGATA_L001_17236_1     2    0.00      0.992 0.00 1.00
#> lane1_3600STDY6167887_TATCTCCT_L001_17236_1     2    0.00      0.992 0.00 1.00
#> lane1_3600STDY6167898_AGCAAGTT_L001_17236_1     2    0.00      0.992 0.00 1.00
#> lane1_3600STDY6167900_ACGGCAGC_L001_17236_1     2    0.00      0.992 0.00 1.00
#> lane1_3600STDY6167901_AGAACTGA_L001_17236_1     2    0.00      0.992 0.00 1.00
#> lane1_3600STDY6167926_GAGGTCGC_L001_17236_1     2    0.00      0.992 0.00 1.00
#> lane1_3600STDY6167940_CTTCTAGA_L001_17236_1     2    0.00      0.992 0.00 1.00
#> lane1_3600STDY6167960_TGGGTTGG_L001_17236_1     2    0.00      0.992 0.00 1.00
#> lane1_3600STDY6167970_GTGTCTGA_L001_17236_1     2    0.00      0.992 0.00 1.00
#> lane1_3600STDY6167992_TTGGAGCA_L001_17236_1     2    0.00      0.992 0.00 1.00
#> lane1_3600STDY6167993_AAGGTCTG_L001_17236_1     2    0.00      0.992 0.00 1.00
#> lane1_3600STDY6168005_ACTTTACT_L001_17236_1     2    0.00      0.992 0.00 1.00
#> lane1_3600STDY6168032_AGGACACT_L001_17236_1     2    0.00      0.992 0.00 1.00
#> lane1_3600STDY6168046_AACTTTTA_L001_17236_1     2    0.00      0.992 0.00 1.00
#> lane1_3600STDY6168056_GAAGAGAT_L001_17236_1     2    0.00      0.992 0.00 1.00
#> lane4_3600STDY6184184_TGACCACT_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184196_TCCGTCTT_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184210_TGTGGTTG_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184214_TAACGCTG_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184218_TCTCACGG_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184220_TAAGTTCG_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184221_TCCAGTCG_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184232_TCGTTAGC_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184233_TACCGAGC_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184235_TTCGCACC_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184236_TTGCGTAC_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184241_TGCTGATA_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184242_TAGACGGA_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184243_TGTGAAGA_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184245_TTGTTCCA_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184249_GGTGAGTT_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184253_GCAACATT_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184255_GAATCTGT_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184269_GTGTGTCG_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184274_GCTAACTC_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184277_GTAGAAGC_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184279_GTGCTACC_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184281_GGTTGGAC_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184284_GTGCAGTA_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184289_GGCAAGCA_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184291_GAACGACA_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184292_GCAGGTAA_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184293_GCGTCGAA_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184296_CTGCGAGT_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184298_CGCTTCCT_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184302_CCACCGAT_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184303_CTTCACAT_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184304_CTATCATG_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184305_CATGAATG_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184308_CTAGATAG_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184316_CAGCTGAC_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184320_CGTTACTA_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184327_AGGAGATT_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184330_AACGTGTG_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184333_ATCCTAGG_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184334_ATCAACCG_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184350_AATGAATT_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184351_TAGGACCC_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184353_CATGGGAA_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184387_GACGCTCA_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184397_CGCACGAG_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184423_ACTTGGGG_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184436_ATTGCACA_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184441_TCCTCCGA_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184451_GATCGAAC_L004_17480_1     2    0.76      0.718 0.22 0.78
#> lane4_3600STDY6184452_GTATAGGG_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184453_GGTAAGAG_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184458_GTGTCTGA_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184469_TTCTTAGC_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184470_TGAGTAAG_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184472_TCGATGCG_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184476_AGGTATCC_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184478_CTGTTTGA_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184479_GGAATTTC_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184481_AAGGTCTG_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184485_CTTATTCC_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184492_GCCGAACC_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184495_ATAACTAG_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184496_AATAGAGA_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184497_TCACCATT_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184499_GCGTGAAC_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184506_TATACATC_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184513_GGACACGG_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184520_AGGACACT_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184521_TTACACTA_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184525_ATCCCCTA_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184527_CAATTGTT_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184530_GCGTAGGT_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184531_GGCATTCG_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184540_TAATCAAC_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184549_GTATCGTC_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184554_AGCAACGA_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184556_CGACCCTT_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184559_AACTTATC_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane4_3600STDY6184561_TTACTACC_L004_17480_1     1    0.00      1.000 1.00 0.00
#> lane1_3600STDY6184069_GGTAAGAG_L001_17592_1     2    0.00      0.992 0.00 1.00
#> lane1_3600STDY6184169_TCCTCTCT_L001_17592_1     1    0.00      1.000 1.00 0.00

show/hide code output

cbind(get_classes(res, k = 3), get_membership(res, k = 3))
#>                                             class entropy silhouette   p1 p2   p3
#> lane3_3600STDY6078002_TCATTGAG_L003_15987_1     2  0.0000      1.000 0.00  1 0.00
#> lane1_3600STDY6167695_TTAGGCAT_L001_17236_1     2  0.0000      1.000 0.00  1 0.00
#> lane1_3600STDY6167704_CTTGTACT_L001_17236_1     2  0.0000      1.000 0.00  1 0.00
#> lane1_3600STDY6167719_TAGTGACT_L001_17236_1     2  0.0000      1.000 0.00  1 0.00
#> lane1_3600STDY6167720_TACAGGAT_L001_17236_1     2  0.0000      1.000 0.00  1 0.00
#> lane1_3600STDY6167721_TCCTCAAT_L001_17236_1     2  0.0000      1.000 0.00  1 0.00
#> lane1_3600STDY6167745_TACCGAGC_L001_17236_1     2  0.0000      1.000 0.00  1 0.00
#> lane1_3600STDY6167747_TTCGCACC_L001_17236_1     2  0.0000      1.000 0.00  1 0.00
#> lane1_3600STDY6167799_GAGTGCGA_L001_17236_1     2  0.0000      1.000 0.00  1 0.00
#> lane1_3600STDY6167817_CATGAATG_L001_17236_1     2  0.0000      1.000 0.00  1 0.00
#> lane1_3600STDY6167821_CACTCGAG_L001_17236_1     2  0.0000      1.000 0.00  1 0.00
#> lane1_3600STDY6167841_ACGTTCAT_L001_17236_1     2  0.0000      1.000 0.00  1 0.00
#> lane1_3600STDY6167843_AGACCGTG_L001_17236_1     2  0.0000      1.000 0.00  1 0.00
#> lane1_3600STDY6167885_GTAAGATA_L001_17236_1     2  0.0000      1.000 0.00  1 0.00
#> lane1_3600STDY6167887_TATCTCCT_L001_17236_1     2  0.0000      1.000 0.00  1 0.00
#> lane1_3600STDY6167898_AGCAAGTT_L001_17236_1     2  0.0000      1.000 0.00  1 0.00
#> lane1_3600STDY6167900_ACGGCAGC_L001_17236_1     2  0.0000      1.000 0.00  1 0.00
#> lane1_3600STDY6167901_AGAACTGA_L001_17236_1     2  0.0000      1.000 0.00  1 0.00
#> lane1_3600STDY6167926_GAGGTCGC_L001_17236_1     2  0.0000      1.000 0.00  1 0.00
#> lane1_3600STDY6167940_CTTCTAGA_L001_17236_1     2  0.0000      1.000 0.00  1 0.00
#> lane1_3600STDY6167960_TGGGTTGG_L001_17236_1     2  0.0000      1.000 0.00  1 0.00
#> lane1_3600STDY6167970_GTGTCTGA_L001_17236_1     2  0.0000      1.000 0.00  1 0.00
#> lane1_3600STDY6167992_TTGGAGCA_L001_17236_1     2  0.0000      1.000 0.00  1 0.00
#> lane1_3600STDY6167993_AAGGTCTG_L001_17236_1     2  0.0000      1.000 0.00  1 0.00
#> lane1_3600STDY6168005_ACTTTACT_L001_17236_1     2  0.0000      1.000 0.00  1 0.00
#> lane1_3600STDY6168032_AGGACACT_L001_17236_1     2  0.0000      1.000 0.00  1 0.00
#> lane1_3600STDY6168046_AACTTTTA_L001_17236_1     2  0.0000      1.000 0.00  1 0.00
#> lane1_3600STDY6168056_GAAGAGAT_L001_17236_1     2  0.0000      1.000 0.00  1 0.00
#> lane4_3600STDY6184184_TGACCACT_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184196_TCCGTCTT_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184210_TGTGGTTG_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184214_TAACGCTG_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184218_TCTCACGG_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184220_TAAGTTCG_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184221_TCCAGTCG_L004_17480_1     1  0.0892      0.976 0.98  0 0.02
#> lane4_3600STDY6184232_TCGTTAGC_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184233_TACCGAGC_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184235_TTCGCACC_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184236_TTGCGTAC_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184241_TGCTGATA_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184242_TAGACGGA_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184243_TGTGAAGA_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184245_TTGTTCCA_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184249_GGTGAGTT_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184253_GCAACATT_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184255_GAATCTGT_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184269_GTGTGTCG_L004_17480_1     3  0.0000      0.955 0.00  0 1.00
#> lane4_3600STDY6184274_GCTAACTC_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184277_GTAGAAGC_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184279_GTGCTACC_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184281_GGTTGGAC_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184284_GTGCAGTA_L004_17480_1     3  0.0000      0.955 0.00  0 1.00
#> lane4_3600STDY6184289_GGCAAGCA_L004_17480_1     3  0.0000      0.955 0.00  0 1.00
#> lane4_3600STDY6184291_GAACGACA_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184292_GCAGGTAA_L004_17480_1     1  0.4796      0.704 0.78  0 0.22
#> lane4_3600STDY6184293_GCGTCGAA_L004_17480_1     3  0.0000      0.955 0.00  0 1.00
#> lane4_3600STDY6184296_CTGCGAGT_L004_17480_1     3  0.0000      0.955 0.00  0 1.00
#> lane4_3600STDY6184298_CGCTTCCT_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184302_CCACCGAT_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184303_CTTCACAT_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184304_CTATCATG_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184305_CATGAATG_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184308_CTAGATAG_L004_17480_1     3  0.0000      0.955 0.00  0 1.00
#> lane4_3600STDY6184316_CAGCTGAC_L004_17480_1     3  0.4555      0.742 0.20  0 0.80
#> lane4_3600STDY6184320_CGTTACTA_L004_17480_1     3  0.0000      0.955 0.00  0 1.00
#> lane4_3600STDY6184327_AGGAGATT_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184330_AACGTGTG_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184333_ATCCTAGG_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184334_ATCAACCG_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184350_AATGAATT_L004_17480_1     1  0.1529      0.955 0.96  0 0.04
#> lane4_3600STDY6184351_TAGGACCC_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184353_CATGGGAA_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184387_GACGCTCA_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184397_CGCACGAG_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184423_ACTTGGGG_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184436_ATTGCACA_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184441_TCCTCCGA_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184451_GATCGAAC_L004_17480_1     3  0.0000      0.955 0.00  0 1.00
#> lane4_3600STDY6184452_GTATAGGG_L004_17480_1     3  0.0000      0.955 0.00  0 1.00
#> lane4_3600STDY6184453_GGTAAGAG_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184458_GTGTCTGA_L004_17480_1     3  0.2959      0.867 0.10  0 0.90
#> lane4_3600STDY6184469_TTCTTAGC_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184470_TGAGTAAG_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184472_TCGATGCG_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184476_AGGTATCC_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184478_CTGTTTGA_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184479_GGAATTTC_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184481_AAGGTCTG_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184485_CTTATTCC_L004_17480_1     3  0.0000      0.955 0.00  0 1.00
#> lane4_3600STDY6184492_GCCGAACC_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184495_ATAACTAG_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184496_AATAGAGA_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184497_TCACCATT_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184499_GCGTGAAC_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184506_TATACATC_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184513_GGACACGG_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184520_AGGACACT_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184521_TTACACTA_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184525_ATCCCCTA_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184527_CAATTGTT_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184530_GCGTAGGT_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184531_GGCATTCG_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184540_TAATCAAC_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184549_GTATCGTC_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184554_AGCAACGA_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184556_CGACCCTT_L004_17480_1     3  0.3340      0.845 0.12  0 0.88
#> lane4_3600STDY6184559_AACTTATC_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane4_3600STDY6184561_TTACTACC_L004_17480_1     1  0.0000      0.996 1.00  0 0.00
#> lane1_3600STDY6184069_GGTAAGAG_L001_17592_1     3  0.0000      0.955 0.00  0 1.00
#> lane1_3600STDY6184169_TCCTCTCT_L001_17592_1     1  0.0000      0.996 1.00  0 0.00

show/hide code output

cbind(get_classes(res, k = 4), get_membership(res, k = 4))
#>                                             class entropy silhouette   p1 p2   p3   p4
#> lane3_3600STDY6078002_TCATTGAG_L003_15987_1     2  0.0000      1.000 0.00  1 0.00 0.00
#> lane1_3600STDY6167695_TTAGGCAT_L001_17236_1     2  0.0000      1.000 0.00  1 0.00 0.00
#> lane1_3600STDY6167704_CTTGTACT_L001_17236_1     2  0.0000      1.000 0.00  1 0.00 0.00
#> lane1_3600STDY6167719_TAGTGACT_L001_17236_1     2  0.0000      1.000 0.00  1 0.00 0.00
#> lane1_3600STDY6167720_TACAGGAT_L001_17236_1     2  0.0000      1.000 0.00  1 0.00 0.00
#> lane1_3600STDY6167721_TCCTCAAT_L001_17236_1     2  0.0000      1.000 0.00  1 0.00 0.00
#> lane1_3600STDY6167745_TACCGAGC_L001_17236_1     2  0.0000      1.000 0.00  1 0.00 0.00
#> lane1_3600STDY6167747_TTCGCACC_L001_17236_1     2  0.0000      1.000 0.00  1 0.00 0.00
#> lane1_3600STDY6167799_GAGTGCGA_L001_17236_1     2  0.0000      1.000 0.00  1 0.00 0.00
#> lane1_3600STDY6167817_CATGAATG_L001_17236_1     2  0.0000      1.000 0.00  1 0.00 0.00
#> lane1_3600STDY6167821_CACTCGAG_L001_17236_1     2  0.0000      1.000 0.00  1 0.00 0.00
#> lane1_3600STDY6167841_ACGTTCAT_L001_17236_1     2  0.0000      1.000 0.00  1 0.00 0.00
#> lane1_3600STDY6167843_AGACCGTG_L001_17236_1     2  0.0000      1.000 0.00  1 0.00 0.00
#> lane1_3600STDY6167885_GTAAGATA_L001_17236_1     2  0.0000      1.000 0.00  1 0.00 0.00
#> lane1_3600STDY6167887_TATCTCCT_L001_17236_1     2  0.0000      1.000 0.00  1 0.00 0.00
#> lane1_3600STDY6167898_AGCAAGTT_L001_17236_1     2  0.0000      1.000 0.00  1 0.00 0.00
#> lane1_3600STDY6167900_ACGGCAGC_L001_17236_1     2  0.0000      1.000 0.00  1 0.00 0.00
#> lane1_3600STDY6167901_AGAACTGA_L001_17236_1     2  0.0000      1.000 0.00  1 0.00 0.00
#> lane1_3600STDY6167926_GAGGTCGC_L001_17236_1     2  0.0000      1.000 0.00  1 0.00 0.00
#> lane1_3600STDY6167940_CTTCTAGA_L001_17236_1     2  0.0000      1.000 0.00  1 0.00 0.00
#> lane1_3600STDY6167960_TGGGTTGG_L001_17236_1     2  0.0000      1.000 0.00  1 0.00 0.00
#> lane1_3600STDY6167970_GTGTCTGA_L001_17236_1     2  0.0000      1.000 0.00  1 0.00 0.00
#> lane1_3600STDY6167992_TTGGAGCA_L001_17236_1     2  0.0000      1.000 0.00  1 0.00 0.00
#> lane1_3600STDY6167993_AAGGTCTG_L001_17236_1     2  0.0000      1.000 0.00  1 0.00 0.00
#> lane1_3600STDY6168005_ACTTTACT_L001_17236_1     2  0.0000      1.000 0.00  1 0.00 0.00
#> lane1_3600STDY6168032_AGGACACT_L001_17236_1     2  0.0000      1.000 0.00  1 0.00 0.00
#> lane1_3600STDY6168046_AACTTTTA_L001_17236_1     2  0.0000      1.000 0.00  1 0.00 0.00
#> lane1_3600STDY6168056_GAAGAGAT_L001_17236_1     2  0.0000      1.000 0.00  1 0.00 0.00
#> lane4_3600STDY6184184_TGACCACT_L004_17480_1     4  0.2921      0.829 0.14  0 0.00 0.86
#> lane4_3600STDY6184196_TCCGTCTT_L004_17480_1     1  0.4855      0.438 0.60  0 0.00 0.40
#> lane4_3600STDY6184210_TGTGGTTG_L004_17480_1     4  0.1637      0.869 0.06  0 0.00 0.94
#> lane4_3600STDY6184214_TAACGCTG_L004_17480_1     4  0.3400      0.790 0.18  0 0.00 0.82
#> lane4_3600STDY6184218_TCTCACGG_L004_17480_1     4  0.4855      0.363 0.40  0 0.00 0.60
#> lane4_3600STDY6184220_TAAGTTCG_L004_17480_1     1  0.0000      0.851 1.00  0 0.00 0.00
#> lane4_3600STDY6184221_TCCAGTCG_L004_17480_1     1  0.0707      0.841 0.98  0 0.00 0.02
#> lane4_3600STDY6184232_TCGTTAGC_L004_17480_1     4  0.0707      0.855 0.02  0 0.00 0.98
#> lane4_3600STDY6184233_TACCGAGC_L004_17480_1     1  0.2345      0.831 0.90  0 0.00 0.10
#> lane4_3600STDY6184235_TTCGCACC_L004_17480_1     4  0.1211      0.865 0.04  0 0.00 0.96
#> lane4_3600STDY6184236_TTGCGTAC_L004_17480_1     1  0.0707      0.841 0.98  0 0.00 0.02
#> lane4_3600STDY6184241_TGCTGATA_L004_17480_1     1  0.3610      0.765 0.80  0 0.00 0.20
#> lane4_3600STDY6184242_TAGACGGA_L004_17480_1     4  0.4948      0.219 0.44  0 0.00 0.56
#> lane4_3600STDY6184243_TGTGAAGA_L004_17480_1     4  0.1211      0.865 0.04  0 0.00 0.96
#> lane4_3600STDY6184245_TTGTTCCA_L004_17480_1     1  0.3400      0.784 0.82  0 0.00 0.18
#> lane4_3600STDY6184249_GGTGAGTT_L004_17480_1     1  0.4522      0.588 0.68  0 0.00 0.32
#> lane4_3600STDY6184253_GCAACATT_L004_17480_1     1  0.0000      0.851 1.00  0 0.00 0.00
#> lane4_3600STDY6184255_GAATCTGT_L004_17480_1     4  0.3975      0.692 0.24  0 0.00 0.76
#> lane4_3600STDY6184269_GTGTGTCG_L004_17480_1     3  0.0000      0.913 0.00  0 1.00 0.00
#> lane4_3600STDY6184274_GCTAACTC_L004_17480_1     1  0.0000      0.851 1.00  0 0.00 0.00
#> lane4_3600STDY6184277_GTAGAAGC_L004_17480_1     4  0.1637      0.869 0.06  0 0.00 0.94
#> lane4_3600STDY6184279_GTGCTACC_L004_17480_1     1  0.1637      0.843 0.94  0 0.00 0.06
#> lane4_3600STDY6184281_GGTTGGAC_L004_17480_1     1  0.0000      0.851 1.00  0 0.00 0.00
#> lane4_3600STDY6184284_GTGCAGTA_L004_17480_1     3  0.0000      0.913 0.00  0 1.00 0.00
#> lane4_3600STDY6184289_GGCAAGCA_L004_17480_1     3  0.0000      0.913 0.00  0 1.00 0.00
#> lane4_3600STDY6184291_GAACGACA_L004_17480_1     4  0.0707      0.855 0.02  0 0.00 0.98
#> lane4_3600STDY6184292_GCAGGTAA_L004_17480_1     4  0.3975      0.679 0.24  0 0.00 0.76
#> lane4_3600STDY6184293_GCGTCGAA_L004_17480_1     3  0.0000      0.913 0.00  0 1.00 0.00
#> lane4_3600STDY6184296_CTGCGAGT_L004_17480_1     3  0.1211      0.899 0.00  0 0.96 0.04
#> lane4_3600STDY6184298_CGCTTCCT_L004_17480_1     1  0.4406      0.641 0.70  0 0.00 0.30
#> lane4_3600STDY6184302_CCACCGAT_L004_17480_1     1  0.3610      0.760 0.80  0 0.00 0.20
#> lane4_3600STDY6184303_CTTCACAT_L004_17480_1     4  0.3801      0.745 0.22  0 0.00 0.78
#> lane4_3600STDY6184304_CTATCATG_L004_17480_1     1  0.0707      0.841 0.98  0 0.00 0.02
#> lane4_3600STDY6184305_CATGAATG_L004_17480_1     1  0.2647      0.822 0.88  0 0.00 0.12
#> lane4_3600STDY6184308_CTAGATAG_L004_17480_1     3  0.0000      0.913 0.00  0 1.00 0.00
#> lane4_3600STDY6184316_CAGCTGAC_L004_17480_1     1  0.5392      0.440 0.68  0 0.28 0.04
#> lane4_3600STDY6184320_CGTTACTA_L004_17480_1     3  0.4406      0.594 0.00  0 0.70 0.30
#> lane4_3600STDY6184327_AGGAGATT_L004_17480_1     4  0.1211      0.865 0.04  0 0.00 0.96
#> lane4_3600STDY6184330_AACGTGTG_L004_17480_1     4  0.2345      0.840 0.10  0 0.00 0.90
#> lane4_3600STDY6184333_ATCCTAGG_L004_17480_1     1  0.0000      0.851 1.00  0 0.00 0.00
#> lane4_3600STDY6184334_ATCAACCG_L004_17480_1     4  0.2647      0.839 0.12  0 0.00 0.88
#> lane4_3600STDY6184350_AATGAATT_L004_17480_1     1  0.0707      0.841 0.98  0 0.00 0.02
#> lane4_3600STDY6184351_TAGGACCC_L004_17480_1     4  0.0707      0.855 0.02  0 0.00 0.98
#> lane4_3600STDY6184353_CATGGGAA_L004_17480_1     1  0.0000      0.851 1.00  0 0.00 0.00
#> lane4_3600STDY6184387_GACGCTCA_L004_17480_1     1  0.3610      0.761 0.80  0 0.00 0.20
#> lane4_3600STDY6184397_CGCACGAG_L004_17480_1     4  0.0707      0.853 0.02  0 0.00 0.98
#> lane4_3600STDY6184423_ACTTGGGG_L004_17480_1     1  0.4624      0.541 0.66  0 0.00 0.34
#> lane4_3600STDY6184436_ATTGCACA_L004_17480_1     1  0.0000      0.851 1.00  0 0.00 0.00
#> lane4_3600STDY6184441_TCCTCCGA_L004_17480_1     1  0.0000      0.851 1.00  0 0.00 0.00
#> lane4_3600STDY6184451_GATCGAAC_L004_17480_1     3  0.0000      0.913 0.00  0 1.00 0.00
#> lane4_3600STDY6184452_GTATAGGG_L004_17480_1     3  0.1913      0.889 0.02  0 0.94 0.04
#> lane4_3600STDY6184453_GGTAAGAG_L004_17480_1     1  0.2921      0.810 0.86  0 0.00 0.14
#> lane4_3600STDY6184458_GTGTCTGA_L004_17480_1     1  0.4755      0.620 0.76  0 0.20 0.04
#> lane4_3600STDY6184469_TTCTTAGC_L004_17480_1     1  0.3975      0.719 0.76  0 0.00 0.24
#> lane4_3600STDY6184470_TGAGTAAG_L004_17480_1     4  0.1637      0.869 0.06  0 0.00 0.94
#> lane4_3600STDY6184472_TCGATGCG_L004_17480_1     1  0.1637      0.843 0.94  0 0.00 0.06
#> lane4_3600STDY6184476_AGGTATCC_L004_17480_1     1  0.2921      0.787 0.86  0 0.00 0.14
#> lane4_3600STDY6184478_CTGTTTGA_L004_17480_1     4  0.4907      0.278 0.42  0 0.00 0.58
#> lane4_3600STDY6184479_GGAATTTC_L004_17480_1     1  0.1211      0.847 0.96  0 0.00 0.04
#> lane4_3600STDY6184481_AAGGTCTG_L004_17480_1     1  0.0000      0.851 1.00  0 0.00 0.00
#> lane4_3600STDY6184485_CTTATTCC_L004_17480_1     3  0.1913      0.884 0.04  0 0.94 0.02
#> lane4_3600STDY6184492_GCCGAACC_L004_17480_1     4  0.1211      0.863 0.04  0 0.00 0.96
#> lane4_3600STDY6184495_ATAACTAG_L004_17480_1     4  0.1637      0.869 0.06  0 0.00 0.94
#> lane4_3600STDY6184496_AATAGAGA_L004_17480_1     1  0.2647      0.821 0.88  0 0.00 0.12
#> lane4_3600STDY6184497_TCACCATT_L004_17480_1     1  0.2345      0.831 0.90  0 0.00 0.10
#> lane4_3600STDY6184499_GCGTGAAC_L004_17480_1     4  0.0707      0.855 0.02  0 0.00 0.98
#> lane4_3600STDY6184506_TATACATC_L004_17480_1     1  0.4624      0.545 0.66  0 0.00 0.34
#> lane4_3600STDY6184513_GGACACGG_L004_17480_1     1  0.0707      0.841 0.98  0 0.00 0.02
#> lane4_3600STDY6184520_AGGACACT_L004_17480_1     1  0.4907      0.391 0.58  0 0.00 0.42
#> lane4_3600STDY6184521_TTACACTA_L004_17480_1     1  0.3801      0.740 0.78  0 0.00 0.22
#> lane4_3600STDY6184525_ATCCCCTA_L004_17480_1     4  0.1211      0.863 0.04  0 0.00 0.96
#> lane4_3600STDY6184527_CAATTGTT_L004_17480_1     4  0.4277      0.597 0.28  0 0.00 0.72
#> lane4_3600STDY6184530_GCGTAGGT_L004_17480_1     1  0.4134      0.700 0.74  0 0.00 0.26
#> lane4_3600STDY6184531_GGCATTCG_L004_17480_1     1  0.0000      0.851 1.00  0 0.00 0.00
#> lane4_3600STDY6184540_TAATCAAC_L004_17480_1     4  0.0707      0.855 0.02  0 0.00 0.98
#> lane4_3600STDY6184549_GTATCGTC_L004_17480_1     4  0.1211      0.863 0.04  0 0.00 0.96
#> lane4_3600STDY6184554_AGCAACGA_L004_17480_1     1  0.0000      0.851 1.00  0 0.00 0.00
#> lane4_3600STDY6184556_CGACCCTT_L004_17480_1     3  0.6005      0.166 0.46  0 0.50 0.04
#> lane4_3600STDY6184559_AACTTATC_L004_17480_1     1  0.0000      0.851 1.00  0 0.00 0.00
#> lane4_3600STDY6184561_TTACTACC_L004_17480_1     1  0.0000      0.851 1.00  0 0.00 0.00
#> lane1_3600STDY6184069_GGTAAGAG_L001_17592_1     3  0.0000      0.913 0.00  0 1.00 0.00
#> lane1_3600STDY6184169_TCCTCTCT_L001_17592_1     4  0.1211      0.863 0.04  0 0.00 0.96

Heatmaps for the consensus matrix. It visualizes the probability of two samples to be in a same group.

consensus_heatmap(res, k = 2)

plot of chunk tab-node-034-consensus-heatmap-1

consensus_heatmap(res, k = 3)

plot of chunk tab-node-034-consensus-heatmap-2

consensus_heatmap(res, k = 4)

plot of chunk tab-node-034-consensus-heatmap-3

Heatmaps for the membership of samples in all partitions to see how consistent they are:

membership_heatmap(res, k = 2)

plot of chunk tab-node-034-membership-heatmap-1

membership_heatmap(res, k = 3)

plot of chunk tab-node-034-membership-heatmap-2

membership_heatmap(res, k = 4)

plot of chunk tab-node-034-membership-heatmap-3

As soon as the classes for columns are determined, the signatures that are significantly different between subgroups can be looked for. Following are the heatmaps for signatures.

Signature heatmaps where rows are scaled:

get_signatures(res, k = 2)

plot of chunk tab-node-034-get-signatures-1

get_signatures(res, k = 3)

plot of chunk tab-node-034-get-signatures-2

get_signatures(res, k = 4)

plot of chunk tab-node-034-get-signatures-3

Signature heatmaps where rows are not scaled:

get_signatures(res, k = 2, scale_rows = FALSE)

plot of chunk tab-node-034-get-signatures-no-scale-1

get_signatures(res, k = 3, scale_rows = FALSE)

plot of chunk tab-node-034-get-signatures-no-scale-2

get_signatures(res, k = 4, scale_rows = FALSE)

plot of chunk tab-node-034-get-signatures-no-scale-3

Compare the overlap of signatures from different k:

compare_signatures(res)

plot of chunk node-034-signature_compare

get_signature() returns a data frame invisibly. To get the list of signatures, the function call should be assigned to a variable explicitly. In following code, if plot argument is set to FALSE, no heatmap is plotted while only the differential analysis is performed.

# code only for demonstration
tb = get_signature(res, k = ..., plot = FALSE)

An example of the output of tb is:

#>   which_row         fdr    mean_1    mean_2 scaled_mean_1 scaled_mean_2 km
#> 1        38 0.042760348  8.373488  9.131774    -0.5533452     0.5164555  1
#> 2        40 0.018707592  7.106213  8.469186    -0.6173731     0.5762149  1
#> 3        55 0.019134737 10.221463 11.207825    -0.6159697     0.5749050  1
#> 4        59 0.006059896  5.921854  7.869574    -0.6899429     0.6439467  1
#> 5        60 0.018055526  8.928898 10.211722    -0.6204761     0.5791110  1
#> 6        98 0.009384629 15.714769 14.887706     0.6635654    -0.6193277  2
...

The columns in tb are:

  1. which_row: row indices corresponding to the input matrix.
  2. fdr: FDR for the differential test.
  3. mean_x: The mean value in group x.
  4. scaled_mean_x: The mean value in group x after rows are scaled.
  5. km: Row groups if k-means clustering is applied to rows (which is done by automatically selecting number of clusters).

If there are too many signatures, top_signatures = ... can be set to only show the signatures with the highest FDRs:

# code only for demonstration
# e.g. to show the top 500 most significant rows
tb = get_signature(res, k = ..., top_signatures = 500)

If the signatures are defined as these which are uniquely high in current group, diff_method argument can be set to "uniquely_high_in_one_group":

# code only for demonstration
tb = get_signature(res, k = ..., diff_method = "uniquely_high_in_one_group")

UMAP plot which shows how samples are separated.

dimension_reduction(res, k = 2, method = "UMAP")

plot of chunk tab-node-034-dimension-reduction-1

dimension_reduction(res, k = 3, method = "UMAP")

plot of chunk tab-node-034-dimension-reduction-2

dimension_reduction(res, k = 4, method = "UMAP")

plot of chunk tab-node-034-dimension-reduction-3

Following heatmap shows how subgroups are split when increasing k:

collect_classes(res)

plot of chunk node-034-collect-classes

Test correlation between subgroups and known annotations. If the known annotation is numeric, one-way ANOVA test is applied, and if the known annotation is discrete, chi-squared contingency table test is applied.

test_to_known_factors(res)
#>             n_sample phenotype(p-value) k
#> ATC:skmeans      110           1.74e-21 2
#> ATC:skmeans      110           1.76e-23 3
#> ATC:skmeans      103           4.15e-21 4

If matrix rows can be associated to genes, consider to use functional_enrichment(res, ...) to perform function enrichment for the signature genes. See this vignette for more detailed explanations.


Node0342

Parent node: Node034. Child nodes: Node01211-leaf , Node01212-leaf , Node01231-leaf , Node01232-leaf , Node01233-leaf , Node02221-leaf , Node02222-leaf , Node03421-leaf , Node03422-leaf , Node03423-leaf .

The object with results only for a single top-value method and a single partitioning method can be extracted as:

res = res_rh["0342"]

A summary of res and all the functions that can be applied to it:

res
#> A 'ConsensusPartition' object with k = 2, 3, 4.
#>   On a matrix with 12985 rows and 30 columns.
#>   Top rows (1298) are extracted by 'ATC' method.
#>   Subgroups are detected by 'skmeans' method.
#>   Performed in total 150 partitions by row resampling.
#>   Best k for subgroups seems to be 3.
#> 
#> Following methods can be applied to this 'ConsensusPartition' object:
#>  [1] "cola_report"             "collect_classes"         "collect_plots"          
#>  [4] "collect_stats"           "colnames"                "compare_partitions"     
#>  [7] "compare_signatures"      "consensus_heatmap"       "dimension_reduction"    
#> [10] "functional_enrichment"   "get_anno_col"            "get_anno"               
#> [13] "get_classes"             "get_consensus"           "get_matrix"             
#> [16] "get_membership"          "get_param"               "get_signatures"         
#> [19] "get_stats"               "is_best_k"               "is_stable_k"            
#> [22] "membership_heatmap"      "ncol"                    "nrow"                   
#> [25] "plot_ecdf"               "predict_classes"         "rownames"               
#> [28] "select_partition_number" "show"                    "suggest_best_k"         
#> [31] "test_to_known_factors"   "top_rows_heatmap"

collect_plots() function collects all the plots made from res for all k (number of subgroups) into one single page to provide an easy and fast comparison between different k.

collect_plots(res)

plot of chunk node-0342-collect-plots

The plots are:

All the plots in panels can be made by individual functions and they are plotted later in this section.

select_partition_number() produces several plots showing different statistics for choosing “optimized” k. There are following statistics:

The detailed explanations of these statistics can be found in the cola vignette.

Generally speaking, higher 1-PAC score, higher mean silhouette score or higher concordance corresponds to better partition. Rand index and Jaccard index measure how similar the current partition is compared to partition with k-1. If they are too similar, we won't accept k is better than k-1.

select_partition_number(res)

plot of chunk node-0342-select-partition-number

The numeric values for all these statistics can be obtained by get_stats().

get_stats(res)
#>   k 1-PAC mean_silhouette concordance area_increased  Rand Jaccard
#> 2 2 1.000           0.948       0.982         0.5112 0.492   0.492
#> 3 3 1.000           0.986       0.993         0.3352 0.687   0.443
#> 4 4 0.778           0.816       0.839         0.0835 0.966   0.891

suggest_best_k() suggests the best \(k\) based on these statistics. The rules are as follows:

suggest_best_k(res)
#> [1] 3
#> attr(,"optional")
#> [1] 2

There is also optional best \(k\) = 2 that is worth to check.

Following is the table of the partitions (You need to click the show/hide code output link to see it). The membership matrix (columns with name p*) is inferred by clue::cl_consensus() function with the SE method. Basically the value in the membership matrix represents the probability to belong to a certain group. The finall subgroup label for an item is determined with the group with highest probability it belongs to.

In get_classes() function, the entropy is calculated from the membership matrix and the silhouette score is calculated from the consensus matrix.

show/hide code output

cbind(get_classes(res, k = 2), get_membership(res, k = 2))
#>                                             class entropy silhouette   p1   p2
#> lane3_3600STDY6078002_TCATTGAG_L003_15987_1     2   0.000     0.9947 0.00 1.00
#> lane1_3600STDY6167695_TTAGGCAT_L001_17236_1     1   0.000     0.9692 1.00 0.00
#> lane1_3600STDY6167704_CTTGTACT_L001_17236_1     1   0.000     0.9692 1.00 0.00
#> lane1_3600STDY6167719_TAGTGACT_L001_17236_1     1   0.000     0.9692 1.00 0.00
#> lane1_3600STDY6167720_TACAGGAT_L001_17236_1     2   0.000     0.9947 0.00 1.00
#> lane1_3600STDY6167721_TCCTCAAT_L001_17236_1     1   0.000     0.9692 1.00 0.00
#> lane1_3600STDY6167745_TACCGAGC_L001_17236_1     1   0.000     0.9692 1.00 0.00
#> lane1_3600STDY6167747_TTCGCACC_L001_17236_1     1   0.000     0.9692 1.00 0.00
#> lane1_3600STDY6167799_GAGTGCGA_L001_17236_1     2   0.000     0.9947 0.00 1.00
#> lane1_3600STDY6167817_CATGAATG_L001_17236_1     1   0.000     0.9692 1.00 0.00
#> lane1_3600STDY6167821_CACTCGAG_L001_17236_1     1   0.000     0.9692 1.00 0.00
#> lane1_3600STDY6167841_ACGTTCAT_L001_17236_1     1   0.000     0.9692 1.00 0.00
#> lane1_3600STDY6167843_AGACCGTG_L001_17236_1     1   0.000     0.9692 1.00 0.00
#> lane1_3600STDY6167885_GTAAGATA_L001_17236_1     2   0.000     0.9947 0.00 1.00
#> lane1_3600STDY6167887_TATCTCCT_L001_17236_1     2   0.000     0.9947 0.00 1.00
#> lane1_3600STDY6167898_AGCAAGTT_L001_17236_1     1   0.999     0.0627 0.52 0.48
#> lane1_3600STDY6167900_ACGGCAGC_L001_17236_1     1   0.000     0.9692 1.00 0.00
#> lane1_3600STDY6167901_AGAACTGA_L001_17236_1     1   0.000     0.9692 1.00 0.00
#> lane1_3600STDY6167926_GAGGTCGC_L001_17236_1     1   0.000     0.9692 1.00 0.00
#> lane1_3600STDY6167940_CTTCTAGA_L001_17236_1     1   0.000     0.9692 1.00 0.00
#> lane1_3600STDY6167960_TGGGTTGG_L001_17236_1     2   0.000     0.9947 0.00 1.00
#> lane1_3600STDY6167970_GTGTCTGA_L001_17236_1     1   0.000     0.9692 1.00 0.00
#> lane1_3600STDY6167992_TTGGAGCA_L001_17236_1     2   0.000     0.9947 0.00 1.00
#> lane1_3600STDY6167993_AAGGTCTG_L001_17236_1     2   0.000     0.9947 0.00 1.00
#> lane1_3600STDY6168005_ACTTTACT_L001_17236_1     2   0.000     0.9947 0.00 1.00
#> lane1_3600STDY6168032_AGGACACT_L001_17236_1     2   0.327     0.9331 0.06 0.94
#> lane1_3600STDY6168046_AACTTTTA_L001_17236_1     1   0.000     0.9692 1.00 0.00
#> lane1_3600STDY6168056_GAAGAGAT_L001_17236_1     2   0.000     0.9947 0.00 1.00
#> lane4_3600STDY6184451_GATCGAAC_L004_17480_1     2   0.000     0.9947 0.00 1.00
#> lane1_3600STDY6184069_GGTAAGAG_L001_17592_1     2   0.000     0.9947 0.00 1.00

show/hide code output

cbind(get_classes(res, k = 3), get_membership(res, k = 3))
#>                                             class entropy silhouette   p1 p2   p3
#> lane3_3600STDY6078002_TCATTGAG_L003_15987_1     2  0.0000      1.000 0.00  1 0.00
#> lane1_3600STDY6167695_TTAGGCAT_L001_17236_1     1  0.0000      0.983 1.00  0 0.00
#> lane1_3600STDY6167704_CTTGTACT_L001_17236_1     1  0.0000      0.983 1.00  0 0.00
#> lane1_3600STDY6167719_TAGTGACT_L001_17236_1     3  0.0000      0.996 0.00  0 1.00
#> lane1_3600STDY6167720_TACAGGAT_L001_17236_1     2  0.0000      1.000 0.00  1 0.00
#> lane1_3600STDY6167721_TCCTCAAT_L001_17236_1     3  0.0000      0.996 0.00  0 1.00
#> lane1_3600STDY6167745_TACCGAGC_L001_17236_1     1  0.0000      0.983 1.00  0 0.00
#> lane1_3600STDY6167747_TTCGCACC_L001_17236_1     1  0.0000      0.983 1.00  0 0.00
#> lane1_3600STDY6167799_GAGTGCGA_L001_17236_1     2  0.0000      1.000 0.00  1 0.00
#> lane1_3600STDY6167817_CATGAATG_L001_17236_1     1  0.0000      0.983 1.00  0 0.00
#> lane1_3600STDY6167821_CACTCGAG_L001_17236_1     1  0.0000      0.983 1.00  0 0.00
#> lane1_3600STDY6167841_ACGTTCAT_L001_17236_1     3  0.1529      0.956 0.04  0 0.96
#> lane1_3600STDY6167843_AGACCGTG_L001_17236_1     3  0.0000      0.996 0.00  0 1.00
#> lane1_3600STDY6167885_GTAAGATA_L001_17236_1     3  0.0000      0.996 0.00  0 1.00
#> lane1_3600STDY6167887_TATCTCCT_L001_17236_1     2  0.0000      1.000 0.00  1 0.00
#> lane1_3600STDY6167898_AGCAAGTT_L001_17236_1     3  0.0000      0.996 0.00  0 1.00
#> lane1_3600STDY6167900_ACGGCAGC_L001_17236_1     1  0.0000      0.983 1.00  0 0.00
#> lane1_3600STDY6167901_AGAACTGA_L001_17236_1     1  0.0892      0.967 0.98  0 0.02
#> lane1_3600STDY6167926_GAGGTCGC_L001_17236_1     1  0.0000      0.983 1.00  0 0.00
#> lane1_3600STDY6167940_CTTCTAGA_L001_17236_1     1  0.0000      0.983 1.00  0 0.00
#> lane1_3600STDY6167960_TGGGTTGG_L001_17236_1     2  0.0000      1.000 0.00  1 0.00
#> lane1_3600STDY6167970_GTGTCTGA_L001_17236_1     1  0.3686      0.840 0.86  0 0.14
#> lane1_3600STDY6167992_TTGGAGCA_L001_17236_1     3  0.0000      0.996 0.00  0 1.00
#> lane1_3600STDY6167993_AAGGTCTG_L001_17236_1     2  0.0000      1.000 0.00  1 0.00
#> lane1_3600STDY6168005_ACTTTACT_L001_17236_1     3  0.0000      0.996 0.00  0 1.00
#> lane1_3600STDY6168032_AGGACACT_L001_17236_1     3  0.0000      0.996 0.00  0 1.00
#> lane1_3600STDY6168046_AACTTTTA_L001_17236_1     3  0.0000      0.996 0.00  0 1.00
#> lane1_3600STDY6168056_GAAGAGAT_L001_17236_1     3  0.0000      0.996 0.00  0 1.00
#> lane4_3600STDY6184451_GATCGAAC_L004_17480_1     2  0.0000      1.000 0.00  1 0.00
#> lane1_3600STDY6184069_GGTAAGAG_L001_17592_1     2  0.0000      1.000 0.00  1 0.00

show/hide code output

cbind(get_classes(res, k = 4), get_membership(res, k = 4))
#>                                             class entropy silhouette   p1   p2   p3   p4
#> lane3_3600STDY6078002_TCATTGAG_L003_15987_1     4  0.0000      1.000 0.00 0.00 0.00 1.00
#> lane1_3600STDY6167695_TTAGGCAT_L001_17236_1     1  0.4790      0.625 0.62 0.38 0.00 0.00
#> lane1_3600STDY6167704_CTTGTACT_L001_17236_1     1  0.0000      0.834 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167719_TAGTGACT_L001_17236_1     3  0.5271      0.727 0.02 0.34 0.64 0.00
#> lane1_3600STDY6167720_TACAGGAT_L001_17236_1     2  0.4907      1.000 0.00 0.58 0.00 0.42
#> lane1_3600STDY6167721_TCCTCAAT_L001_17236_1     3  0.4790      0.723 0.00 0.38 0.62 0.00
#> lane1_3600STDY6167745_TACCGAGC_L001_17236_1     1  0.0000      0.834 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167747_TTCGCACC_L001_17236_1     1  0.0000      0.834 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167799_GAGTGCGA_L001_17236_1     2  0.4907      1.000 0.00 0.58 0.00 0.42
#> lane1_3600STDY6167817_CATGAATG_L001_17236_1     1  0.1211      0.815 0.96 0.04 0.00 0.00
#> lane1_3600STDY6167821_CACTCGAG_L001_17236_1     1  0.0000      0.834 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167841_ACGTTCAT_L001_17236_1     3  0.7021      0.562 0.12 0.40 0.48 0.00
#> lane1_3600STDY6167843_AGACCGTG_L001_17236_1     3  0.4855      0.710 0.00 0.40 0.60 0.00
#> lane1_3600STDY6167885_GTAAGATA_L001_17236_1     3  0.0000      0.805 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167887_TATCTCCT_L001_17236_1     2  0.4907      1.000 0.00 0.58 0.00 0.42
#> lane1_3600STDY6167898_AGCAAGTT_L001_17236_1     3  0.0707      0.804 0.00 0.02 0.98 0.00
#> lane1_3600STDY6167900_ACGGCAGC_L001_17236_1     1  0.0707      0.827 0.98 0.02 0.00 0.00
#> lane1_3600STDY6167901_AGAACTGA_L001_17236_1     1  0.6510      0.517 0.54 0.38 0.08 0.00
#> lane1_3600STDY6167926_GAGGTCGC_L001_17236_1     1  0.3610      0.760 0.80 0.20 0.00 0.00
#> lane1_3600STDY6167940_CTTCTAGA_L001_17236_1     1  0.0000      0.834 1.00 0.00 0.00 0.00
#> lane1_3600STDY6167960_TGGGTTGG_L001_17236_1     2  0.4907      1.000 0.00 0.58 0.00 0.42
#> lane1_3600STDY6167970_GTGTCTGA_L001_17236_1     1  0.7021      0.438 0.48 0.40 0.12 0.00
#> lane1_3600STDY6167992_TTGGAGCA_L001_17236_1     3  0.0000      0.805 0.00 0.00 1.00 0.00
#> lane1_3600STDY6167993_AAGGTCTG_L001_17236_1     2  0.4907      1.000 0.00 0.58 0.00 0.42
#> lane1_3600STDY6168005_ACTTTACT_L001_17236_1     3  0.0000      0.805 0.00 0.00 1.00 0.00
#> lane1_3600STDY6168032_AGGACACT_L001_17236_1     3  0.0000      0.805 0.00 0.00 1.00 0.00
#> lane1_3600STDY6168046_AACTTTTA_L001_17236_1     3  0.4134      0.765 0.00 0.26 0.74 0.00
#> lane1_3600STDY6168056_GAAGAGAT_L001_17236_1     3  0.0000      0.805 0.00 0.00 1.00 0.00
#> lane4_3600STDY6184451_GATCGAAC_L004_17480_1     4  0.0000      1.000 0.00 0.00 0.00 1.00
#> lane1_3600STDY6184069_GGTAAGAG_L001_17592_1     4  0.0000      1.000 0.00 0.00 0.00 1.00

Heatmaps for the consensus matrix. It visualizes the probability of two samples to be in a same group.

consensus_heatmap(res, k = 2)

plot of chunk tab-node-0342-consensus-heatmap-1

consensus_heatmap(res, k = 3)

plot of chunk tab-node-0342-consensus-heatmap-2

consensus_heatmap(res, k = 4)

plot of chunk tab-node-0342-consensus-heatmap-3

Heatmaps for the membership of samples in all partitions to see how consistent they are:

membership_heatmap(res, k = 2)

plot of chunk tab-node-0342-membership-heatmap-1

membership_heatmap(res, k = 3)

plot of chunk tab-node-0342-membership-heatmap-2

membership_heatmap(res, k = 4)

plot of chunk tab-node-0342-membership-heatmap-3

As soon as the classes for columns are determined, the signatures that are significantly different between subgroups can be looked for. Following are the heatmaps for signatures.

Signature heatmaps where rows are scaled:

get_signatures(res, k = 2)

plot of chunk tab-node-0342-get-signatures-1

get_signatures(res, k = 3)

plot of chunk tab-node-0342-get-signatures-2

get_signatures(res, k = 4)

plot of chunk tab-node-0342-get-signatures-3

Signature heatmaps where rows are not scaled:

get_signatures(res, k = 2, scale_rows = FALSE)

plot of chunk tab-node-0342-get-signatures-no-scale-1

get_signatures(res, k = 3, scale_rows = FALSE)

plot of chunk tab-node-0342-get-signatures-no-scale-2

get_signatures(res, k = 4, scale_rows = FALSE)

plot of chunk tab-node-0342-get-signatures-no-scale-3

Compare the overlap of signatures from different k:

compare_signatures(res)

plot of chunk node-0342-signature_compare

get_signature() returns a data frame invisibly. To get the list of signatures, the function call should be assigned to a variable explicitly. In following code, if plot argument is set to FALSE, no heatmap is plotted while only the differential analysis is performed.

# code only for demonstration
tb = get_signature(res, k = ..., plot = FALSE)

An example of the output of tb is:

#>   which_row         fdr    mean_1    mean_2 scaled_mean_1 scaled_mean_2 km
#> 1        38 0.042760348  8.373488  9.131774    -0.5533452     0.5164555  1
#> 2        40 0.018707592  7.106213  8.469186    -0.6173731     0.5762149  1
#> 3        55 0.019134737 10.221463 11.207825    -0.6159697     0.5749050  1
#> 4        59 0.006059896  5.921854  7.869574    -0.6899429     0.6439467  1
#> 5        60 0.018055526  8.928898 10.211722    -0.6204761     0.5791110  1
#> 6        98 0.009384629 15.714769 14.887706     0.6635654    -0.6193277  2
...

The columns in tb are:

  1. which_row: row indices corresponding to the input matrix.
  2. fdr: FDR for the differential test.
  3. mean_x: The mean value in group x.
  4. scaled_mean_x: The mean value in group x after rows are scaled.
  5. km: Row groups if k-means clustering is applied to rows (which is done by automatically selecting number of clusters).

If there are too many signatures, top_signatures = ... can be set to only show the signatures with the highest FDRs:

# code only for demonstration
# e.g. to show the top 500 most significant rows
tb = get_signature(res, k = ..., top_signatures = 500)

If the signatures are defined as these which are uniquely high in current group, diff_method argument can be set to "uniquely_high_in_one_group":

# code only for demonstration
tb = get_signature(res, k = ..., diff_method = "uniquely_high_in_one_group")

UMAP plot which shows how samples are separated.

dimension_reduction(res, k = 2, method = "UMAP")

plot of chunk tab-node-0342-dimension-reduction-1

dimension_reduction(res, k = 3, method = "UMAP")

plot of chunk tab-node-0342-dimension-reduction-2

dimension_reduction(res, k = 4, method = "UMAP")

plot of chunk tab-node-0342-dimension-reduction-3

Following heatmap shows how subgroups are split when increasing k:

collect_classes(res)

plot of chunk node-0342-collect-classes

Test correlation between subgroups and known annotations. If the known annotation is numeric, one-way ANOVA test is applied, and if the known annotation is discrete, chi-squared contingency table test is applied.

test_to_known_factors(res)
#>             n_sample phenotype(p-value) k
#> ATC:skmeans       29           1.57e-01 2
#> ATC:skmeans       30           1.02e-02 3
#> ATC:skmeans       29           2.24e-06 4

If matrix rows can be associated to genes, consider to use functional_enrichment(res, ...) to perform function enrichment for the signature genes. See this vignette for more detailed explanations.

Session info

sessionInfo()
#> R version 4.1.0 (2021-05-18)
#> Platform: x86_64-pc-linux-gnu (64-bit)
#> Running under: CentOS Linux 7 (Core)
#> 
#> Matrix products: default
#> BLAS/LAPACK: /usr/lib64/libopenblas-r0.3.3.so
#> 
#> locale:
#>  [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C               LC_TIME=en_US.UTF-8       
#>  [4] LC_COLLATE=en_US.UTF-8     LC_MONETARY=en_US.UTF-8    LC_MESSAGES=en_US.UTF-8   
#>  [7] LC_PAPER=en_US.UTF-8       LC_NAME=C                  LC_ADDRESS=C              
#> [10] LC_TELEPHONE=C             LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C       
#> 
#> attached base packages:
#>  [1] grid      parallel  stats4    stats     graphics  grDevices utils     datasets  methods  
#> [10] base     
#> 
#> other attached packages:
#>  [1] genefilter_1.74.0           ComplexHeatmap_2.8.0        markdown_1.1               
#>  [4] knitr_1.33                  scRNAseq_2.6.1              SingleCellExperiment_1.14.1
#>  [7] SummarizedExperiment_1.22.0 Biobase_2.52.0              GenomicRanges_1.44.0       
#> [10] GenomeInfoDb_1.28.1         IRanges_2.26.0              S4Vectors_0.30.0           
#> [13] BiocGenerics_0.38.0         MatrixGenerics_1.4.0        matrixStats_0.59.0         
#> [16] cola_1.9.4                 
#> 
#> loaded via a namespace (and not attached):
#>   [1] circlize_0.4.13               AnnotationHub_3.0.1           BiocFileCache_2.0.0          
#>   [4] lazyeval_0.2.2                polylabelr_0.2.0              splines_4.1.0                
#>   [7] Polychrome_1.3.1              BiocParallel_1.26.1           ggplot2_3.3.5                
#>  [10] digest_0.6.27                 foreach_1.5.1                 ensembldb_2.16.3             
#>  [13] htmltools_0.5.1.1             viridis_0.6.1                 fansi_0.5.0                  
#>  [16] magrittr_2.0.1                memoise_2.0.0                 cluster_2.1.2                
#>  [19] doParallel_1.0.16             Biostrings_2.60.1             annotate_1.70.0              
#>  [22] askpass_1.1                   prettyunits_1.1.1             colorspace_2.0-2             
#>  [25] blob_1.2.1                    rappdirs_0.3.3                xfun_0.24                    
#>  [28] dplyr_1.0.7                   crayon_1.4.1                  RCurl_1.98-1.3               
#>  [31] microbenchmark_1.4-7          jsonlite_1.7.2                impute_1.66.0                
#>  [34] brew_1.0-6                    survival_3.2-11               iterators_1.0.13             
#>  [37] glue_1.4.2                    polyclip_1.10-0               gtable_0.3.0                 
#>  [40] zlibbioc_1.38.0               XVector_0.32.0                GetoptLong_1.0.5             
#>  [43] DelayedArray_0.18.0           shape_1.4.6                   scales_1.1.1                 
#>  [46] data.tree_1.0.0               DBI_1.1.1                     Rcpp_1.0.7                   
#>  [49] viridisLite_0.4.0             xtable_1.8-4                  progress_1.2.2               
#>  [52] clue_0.3-59                   reticulate_1.20               bit_4.0.4                    
#>  [55] mclust_5.4.7                  umap_0.2.7.0                  httr_1.4.2                   
#>  [58] RColorBrewer_1.1-2            ellipsis_0.3.2                pkgconfig_2.0.3              
#>  [61] XML_3.99-0.6                  dbplyr_2.1.1                  utf8_1.2.1                   
#>  [64] tidyselect_1.1.1              rlang_0.4.11                  later_1.2.0                  
#>  [67] AnnotationDbi_1.54.1          munsell_0.5.0                 BiocVersion_3.13.1           
#>  [70] tools_4.1.0                   cachem_1.0.5                  generics_0.1.0               
#>  [73] RSQLite_2.2.7                 ExperimentHub_2.0.0           evaluate_0.14                
#>  [76] stringr_1.4.0                 fastmap_1.1.0                 yaml_2.2.1                   
#>  [79] bit64_4.0.5                   purrr_0.3.4                   dendextend_1.15.1            
#>  [82] KEGGREST_1.32.0               AnnotationFilter_1.16.0       mime_0.11                    
#>  [85] slam_0.1-48                   xml2_1.3.2                    biomaRt_2.48.2               
#>  [88] compiler_4.1.0                rstudioapi_0.13               filelock_1.0.2               
#>  [91] curl_4.3.2                    png_0.1-7                     interactiveDisplayBase_1.30.0
#>  [94] tibble_3.1.2                  stringi_1.7.3                 highr_0.9                    
#>  [97] GenomicFeatures_1.44.0        RSpectra_0.16-0               lattice_0.20-44              
#> [100] ProtGenerics_1.24.0           Matrix_1.3-4                  vctrs_0.3.8                  
#> [103] pillar_1.6.1                  lifecycle_1.0.0               BiocManager_1.30.16          
#> [106] eulerr_6.1.0                  GlobalOptions_0.1.2           bitops_1.0-7                 
#> [109] irlba_2.3.3                   httpuv_1.6.1                  rtracklayer_1.52.0           
#> [112] R6_2.5.0                      BiocIO_1.2.0                  promises_1.2.0.1             
#> [115] gridExtra_2.3                 codetools_0.2-18              assertthat_0.2.1             
#> [118] openssl_1.4.4                 rjson_0.2.20                  GenomicAlignments_1.28.0     
#> [121] Rsamtools_2.8.0               GenomeInfoDbData_1.2.6        hms_1.1.0                    
#> [124] skmeans_0.2-13                Cairo_1.5-12.2                scatterplot3d_0.3-41         
#> [127] shiny_1.6.0                   restfulr_0.0.13